BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8633
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242023263|ref|XP_002432055.1| DNA polymerase delta small subunit, putative [Pediculus humanus
corporis]
gi|212517413|gb|EEB19317.1| DNA polymerase delta small subunit, putative [Pediculus humanus
corporis]
Length = 328
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 188/312 (60%), Gaps = 42/312 (13%)
Query: 11 FTGNQSKFETKTIEI---EKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEI 67
+ G + +TI+ + G + + KLS+L + E+C++IGTLFKHQ+LKP++LKEI
Sbjct: 53 YAGRLKIMKQRTIQACSAKWGSQIPIRKLSELADESKEKCIVIGTLFKHQELKPSVLKEI 112
Query: 68 SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKF 127
SEE ++ PQP + F+S++D+LILEDE+QRI L ++ Q+ ++ + T
Sbjct: 113 SEEHQITPQPVLSKFISENDQLILEDEMQRISL-DTLNAVKQLDEILSELAKT------- 164
Query: 128 KVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA 187
+ VD+MPG FDP+N +PQQP + CLFP A
Sbjct: 165 ------------------------------VHVDVMPGGFDPSNYLMPQQPFYKCLFPNA 194
Query: 188 SKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAP 247
SKY++F VTNPY +EG ++GTSGQP+ DI S+ +N +DILE TL+ GH+AP+AP
Sbjct: 195 SKYNSFQCVTNPYECTIEGIRILGTSGQPIDDIKSLSDFNNSIDILENTLKWGHLAPSAP 254
Query: 248 DTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAI 307
DT ACYP+YD DP II P VYF GNQ K+ TK I + RLIS+P F ++T +
Sbjct: 255 DTQACYPYYDEDPFIITEQPHVYFVGNQDKYSTKVINLN-GHFTRLISLPTFHDTQTCIL 313
Query: 308 LNLSTLECHSLV 319
LNL TLE LV
Sbjct: 314 LNLKTLESVPLV 325
>gi|23306120|gb|AAN17387.1| Putataive DNA polymerase delta small subunit [Oryza sativa Japonica
Group]
Length = 404
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 176/322 (54%), Gaps = 48/322 (14%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 55 LGLEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRV 114
Query: 99 PLHGNIDIHNQVT---GVVVAIKGTPVGNGKFK--------------------------- 128
L G I VT VV + G +G+ KF
Sbjct: 115 TLAGAIPPAAYVTDEDKYVVFVSGLSIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNI 174
Query: 129 -----VSDVCYATP-VFNPRTTLSNNENKYVNH------------SSIEVDLMPGEFDPA 170
+ + +P FN + S ++++ +S+ VD+MPG DPA
Sbjct: 175 VRVVVAGNSVHISPRFFNGQAVASKDQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPA 234
Query: 171 NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPL 230
N +LPQQPLH CLF A+ Y+TF +NP+ FE++ +GTSGQ + D+ K+S+ + L
Sbjct: 235 NFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKL 294
Query: 231 DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKN 290
+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ K+ET+ ++ + +
Sbjct: 295 EFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQDKYETQLLQGLEKQK 354
Query: 291 VRLISVPDFFSSRTVAILNLST 312
VRLI +P F S ++N S+
Sbjct: 355 VRLICIPRFCDSGVAVMVNTSS 376
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIE-IEKGK 29
++ESCP VYF GNQ K+ET+ ++ +EK K
Sbjct: 325 FLVESCPHVYFVGNQDKYETQLLQGLEKQK 354
>gi|405975321|gb|EKC39895.1| DNA polymerase delta subunit 2 [Crassostrea gigas]
Length = 462
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 116/160 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS++VDLMPGE+DPAN TLPQQPLH C+FPEAS+Y TFH VTNPY F++EG +GTSGQ
Sbjct: 288 SSVDVDLMPGEYDPANYTLPQQPLHKCMFPEASRYPTFHTVTNPYDFKVEGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI K+S PLDILE TL GH+APTAPDTL CYPFY DP II CP V F GN
Sbjct: 348 AVQDIVKYSTNEEPLDILEKTLEWGHLAPTAPDTLGCYPFYKEDPFIINDCPHVLFAGNM 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
+KF++K + + V L+SVP F + T ++NL T +C
Sbjct: 408 TKFDSKVFKGCGGQEVLLVSVPRFSQTSTAVMVNLRTQDC 447
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
GK + + KL +L +T CV+IGTLFKH +LKP+IL+EISEE L+PQP T +V +SD
Sbjct: 73 GKDIVIRKLHELKSDET--CVVIGTLFKHMELKPSILQEISEEHNLMPQPVRTKYVDESD 130
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGN--GKFKVSDVCY 134
+L LEDELQRI L G++D+ VTGV++A+ G + GKF V C+
Sbjct: 131 KLYLEDELQRIILMGDLDVQTSVTGVIIAVYGKEPEDDQGKFHVEKYCF 179
>gi|346471337|gb|AEO35513.1| hypothetical protein [Amblyomma maculatum]
Length = 444
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 120/165 (72%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+EVD+MPG DP T LPQQPLHPCLFP AS+ + VTNPY FE++G +GTSGQ
Sbjct: 277 SVEVDVMPGLSDPVGTLLPQQPLHPCLFPGASQRAALRCVTNPYQFELDGMRFLGTSGQN 336
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V+DI ++S L+ PL+I+E TL+ H+APT PDTL+CYPF D DP I++SCP VYF GNQ
Sbjct: 337 VTDIQRYSQLTCPLEIMEKTLQWRHLAPTCPDTLSCYPFTDQDPFILDSCPHVYFVGNQK 396
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
KF TK + E+ + VRL++VP F + T +LN+ TLEC ++ +
Sbjct: 397 KFATKLFKGERGQTVRLVAVPSFCKTFTCVLLNMRTLECDPMIFD 441
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 11 FTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE 70
+ +S E + E + L +L E + +++GTLFK +L+P+ILKEISEE
Sbjct: 47 YNAMRSILEGRAKEKWGKLKAPITSLCELVED--KRSIVVGTLFKIMELQPSILKEISEE 104
Query: 71 LKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVS 130
+ PQPQ +HF ++D L+LED+ QR+ L GNID+H VTGV VA+ G +G+F V
Sbjct: 105 HHVAPQPQRSHFTDNADSLVLEDDKQRLALAGNIDVHAHVTGVPVAVLGQVGTDGRFTVE 164
Query: 131 DVCYA 135
+ CYA
Sbjct: 165 EFCYA 169
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
I++SCP VYF GNQ KF TK + E+G++V ++ + +T T CV++
Sbjct: 381 FILDSCPHVYFVGNQKKFATKLFKGERGQTVRLVAVPSFCKTFT--CVLL 428
>gi|149557343|ref|XP_001520117.1| PREDICTED: DNA polymerase delta subunit 2-like [Ornithorhynchus
anatinus]
Length = 471
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 122/171 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP AS YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNFTLPQQPLHPCMFPLASAYSTLQLVTNPYQATIDGVSFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR GH++PTAPDTL CYPFY +DP II +CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVGHISPTAPDTLGCYPFYKSDPFIIPTCPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F K ++ + + V L++VPDF +++T ++NL TL+C + E
Sbjct: 408 PTFRCKEVQGPEGQRVLLVAVPDFSATQTACLVNLRTLDCQPISFSGFGAE 458
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V+V KL +L EEC ++GTL+K QL+P+IL+EISEE L+PQP T ++ D
Sbjct: 74 GSGVNVRKLCELQPG--EECCVVGTLYKAMQLQPSILREISEEHNLLPQPTRTKYLHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
ELILEDELQRI L G ID+ VTG V+A++G+ +GKF V + C+A
Sbjct: 132 ELILEDELQRIKLEGTIDVSRLVTGTVLAVRGSVKDDGKFLVEEHCFA 179
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
II +CP VYF GN F K ++ +G+ V ++ + D + T T V + TL
Sbjct: 393 FIIPTCPHVYFCGNTPTFRCKEVQGPEGQRVLLVAVPDFSATQTACLVNLRTL 445
>gi|395850111|ref|XP_003797642.1| PREDICTED: DNA polymerase delta subunit 2 [Otolemur garnettii]
Length = 543
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 117/161 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 362 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 421
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI ++S++ + LDILE+TLR GH++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 422 NVIDIFRYSSMEDHLDILEWTLRVGHISPTAPDTLGCYPFYKTDPFIFSECPHVYFCGNT 481
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F +K I+ +D+ V L++VPDF +++T ++NL +L C
Sbjct: 482 PSFGSKIIQGPEDQRVLLVTVPDFSATQTACLVNLRSLACQ 522
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Query: 26 EKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 85
+ G V V KL +L E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++
Sbjct: 146 QWGSGVEVKKLCELQPG--EKCCVVGTLFKAMQLQPSILREISEEHNLLPQPPRSKYIHP 203
Query: 86 SDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
DEL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 204 DDELVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSVRDDGKFLVEDHCFA 253
>gi|390343504|ref|XP_782368.2| PREDICTED: DNA polymerase delta subunit 2-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 123/164 (75%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S I VDLM G+FDPAN++LPQQP H C+FP++S YSTF+ VTNPY ++ G ++G+SGQ
Sbjct: 274 SCIPVDLMAGDFDPANSSLPQQPFHRCMFPQSSVYSTFNSVTNPYEAKIAGIRVLGSSGQ 333
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V+DI +F+ + + L ILE TL+ GH+AP+APDTLACYPFYD DP II+ CP +YF GNQ
Sbjct: 334 NVTDIYQFTTMEDRLSILEQTLKYGHIAPSAPDTLACYPFYDQDPFIIKECPAIYFAGNQ 393
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLV 319
+F+TK + D+ V L++VP F +++ I+NL T++C L+
Sbjct: 394 PRFQTKKLTGSCDQEVLLVTVPSFQETKSCVIINLRTMDCQPLI 437
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E+ +++GTLFK +LKP+ILKEISE+ L PQP F SDSD L+LEDELQR+ L GNI
Sbjct: 76 EKQIVVGTLFKSMELKPSILKEISEDRNLTPQPVRERFFSDSDFLVLEDELQRVVLTGNI 135
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D+ +TG V+A+KG NGKF+V D CY
Sbjct: 136 DVQTAITGTVIAVKGFENDNGKFEVEDSCY 165
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
II+ CP +YF GNQ +F+TK + + V ++ + E T+ CVII
Sbjct: 379 FIIKECPAIYFAGNQPRFQTKKLTGSCDQEVLLVTVPSFQE--TKSCVII 426
>gi|260824487|ref|XP_002607199.1| hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae]
gi|229292545|gb|EEN63209.1| hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae]
Length = 449
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 123/171 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S ++VD+MPG+FDPAN LPQQPLH C+FP A KY T H V NPY ++ G +GTSGQ
Sbjct: 272 SCVDVDVMPGDFDPANHVLPQQPLHRCMFPRAMKYPTMHTVPNPYEADVGGVRFLGTSGQ 331
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI K+S+L N L+ILE TL GH+APTAPDTL YPF+++DP I++SCP VYF GNQ
Sbjct: 332 NIEDIYKYSSLENSLEILEKTLTVGHLAPTAPDTLGSYPFHESDPFILKSCPHVYFAGNQ 391
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
+KF++K +E + + L++VP F +++ ++NL TL+C L V+ +E
Sbjct: 392 AKFQSKVLEGDDGQRALLVTVPKFSQTQSCVLVNLRTLQCEVLQVQAAWDE 442
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 30 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 89
V KLS++ +T CV+IGTLFKH +LKP+ILKEISEE +PQP + D+D L
Sbjct: 61 GVDAKKLSEMETGET--CVVIGTLFKHMELKPSILKEISEEEGAMPQPPRAKYTEDADNL 118
Query: 90 ILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
ILEDE+QR+ L G +D+ + VTG +VA+ G +GKF+V D CY
Sbjct: 119 ILEDEVQRVSLAGKLDVQSSVTGTIVAVYGAEDESGKFQVKDFCY 163
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
I++SCP VYF GNQ+KF++K +E + G+ ++ + ++ T+ CV++
Sbjct: 378 ILKSCPHVYFAGNQAKFQSKVLEGDDGQRALLVTVPKFSQ--TQSCVLV 424
>gi|395506992|ref|XP_003757812.1| PREDICTED: DNA polymerase delta subunit 2 [Sarcophilus harrisii]
Length = 537
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 120/171 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP AS YST VTNPY ++G +GTSGQ
Sbjct: 354 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLASAYSTLQLVTNPYQATIDGVRFLGTSGQ 413
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR GH++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 414 NVSDIFRYSSMEDHLEILEWTLRVGHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 473
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
KF +K I +++ V L++VP+F +++T ++NL L C + + E
Sbjct: 474 PKFCSKIIRGPEEQTVLLVAVPNFSTTQTACLVNLRNLACQPISFSGFSAE 524
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
VSV KL +L E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++ DELI
Sbjct: 143 VSVKKLCELQPG--EKCCVVGTLFKSMQLQPSILREISEEHNLLPQPPRSKYIHPDDELI 200
Query: 91 LEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
LEDELQRI L G ID+ VTG+V+A+ G+ +GKF V D C+A
Sbjct: 201 LEDELQRIRLEGTIDVSRLVTGIVLAVLGSVQDDGKFLVEDHCFA 245
>gi|444517803|gb|ELV11799.1| DNA polymerase delta subunit 2 [Tupaia chinensis]
Length = 469
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFVECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +KTI +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKTIHGPEDQTVLLVAVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G ++ V KL +L E C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSAIGVKKLCELQPG--ERCCVVGTLFKAMPLQPSILREISEEHSLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L+G I++ VTG V+A+ G+ +G+F V D C A
Sbjct: 132 ELVLEDELQRIKLNGTINVSLLVTGTVLAVLGSVGDDGRFLVEDHCLA 179
>gi|74010360|ref|XP_539802.2| PREDICTED: DNA polymerase delta subunit 2 [Canis lupus familiaris]
Length = 469
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY NDP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRIRHISPTAPDTLGCYPFYKNDPFIFPDCPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
+F +K +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PQFGSKIFRGPEDQRVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G + + KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP
Sbjct: 64 FLVSRAQQHWGDGIQIKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ D+L+LEDELQRI L G+ID VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDQLVLEDELQRIKLEGSIDASKLVTGTVLAVLGSVRDSGKFLVEDHCFA 179
>gi|344293820|ref|XP_003418618.1| PREDICTED: DNA polymerase delta subunit 2-like [Loxodonta africana]
Length = 460
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 117/161 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 278 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 337
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I+ CP VYF GN
Sbjct: 338 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIVPECPHVYFCGNT 397
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F +K I +D+ V L++VPDF +++T ++NL +L C
Sbjct: 398 PSFGSKVIRGPEDQTVLLVAVPDFSATQTACLVNLRSLVCQ 438
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L EEC ++GTLFK QL+P+IL+E+SEE L+PQP + ++ D
Sbjct: 74 GSGVRVRKLCELQ--PGEECCVVGTLFKAMQLQPSILREVSEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGT 120
EL+LEDELQRI L G I++ VTG V+A+ G+
Sbjct: 132 ELVLEDELQRIKLEGTIEVQKLVTGTVLAVLGS 164
>gi|402863614|ref|XP_003896102.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Papio anubis]
Length = 504
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 323 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 383 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 443 PSFGSKIIQGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 493
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 109 GSGVGVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 166
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 167 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 214
>gi|384499023|gb|EIE89514.1| hypothetical protein RO3G_14225 [Rhizopus delemar RA 99-880]
Length = 894
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 165/319 (51%), Gaps = 39/319 (12%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN E C ++GT++ KPN+L ++ +E +V + SD D + LEDE R+
Sbjct: 175 LNTQPGELCYMVGTIYLQMNKKPNVLNDLEDEETIVRPDTPAKYRSDEDVISLEDESGRV 234
Query: 99 PLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFNPRTTLS---------- 146
+ G + VTG++V I G V G F+V D+C P P TTL
Sbjct: 235 EITGACLSKQFLVTGMIVGILGKEVATGTFEVIDICLPGVPPQKPLTTLQEFLTGELEGE 294
Query: 147 ----------------------NNENKYVNH-----SSIEVDLMPGEFDPANTTLPQQPL 179
NNE + S+++VD+MPG DP+ + LPQQ +
Sbjct: 295 QSSSITRVILAGNSIIKPKKAKNNEGHVDDFLEELCSTVDVDIMPGATDPSQSHLPQQRM 354
Query: 180 HPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRC 239
HP +F +A K ST + V+NPY E+E +GTSGQ + DI ++ + + L + E +
Sbjct: 355 HPSMFKQAHKLSTLNSVSNPYWCEIENITFLGTSGQNIDDIYRYVDSEDRLQMAESCMYW 414
Query: 240 GHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDF 299
H+AP+APDTL YPF D DP IIE CP VYF GNQ +FE + + +R+I +P F
Sbjct: 415 RHMAPSAPDTLWSYPFKDRDPFIIEQCPHVYFVGNQPEFEDNLLLGPDGQQIRVILLPSF 474
Query: 300 FSSRTVAILNLSTLECHSL 318
+ TV +LNLS LEC L
Sbjct: 475 AETGTVVLLNLSNLECSIL 493
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
IIE CP VYF GNQ +FE + G+ + V+ L ET T
Sbjct: 436 FIIEQCPHVYFVGNQPEFEDNLLLGPDGQQIRVILLPSFAETGT 479
>gi|126303407|ref|XP_001379694.1| PREDICTED: DNA polymerase delta subunit 2-like [Monodelphis
domestica]
Length = 471
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR GH++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVGHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +++ V L++VP+F +++T ++NL L C + + E
Sbjct: 408 PNFRSKIIRGPEEQTVLLVAVPNFSTTQTACLVNLRNLACQPISFSGFSAE 458
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
VSV KL +L E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++ DELI
Sbjct: 77 VSVRKLCELQPG--EKCCVVGTLFKSMQLQPSILREISEEHNLLPQPPRSKYIHPDDELI 134
Query: 91 LEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
LEDELQRI L G ID+ VTG+V+A+ G+ +GKF V D C+A
Sbjct: 135 LEDELQRIKLEGTIDVSKLVTGIVLAVLGSVQDDGKFLVEDHCFA 179
>gi|426227871|ref|XP_004008038.1| PREDICTED: DNA polymerase delta subunit 2 [Ovis aries]
Length = 469
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 120/171 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TL+ H++PTAPDTL CYPFY NDP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYPFYKNDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 74 GSGVLVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
ELILEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELILEDELQRIKLEGTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|2398725|emb|CAA96567.1| DNA polymerase delta small subunit [Mus musculus]
Length = 469
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 119/172 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
F +K I +D+ V L++VPDF S++T ++NL +L C + E+
Sbjct: 408 PSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLACQPISFAGFGAEQ 459
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ D
Sbjct: 74 GSRVEVKKLCELQPG--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|226423863|ref|NP_032920.2| DNA polymerase delta subunit 2 [Mus musculus]
gi|341940459|sp|O35654.2|DPOD2_MOUSE RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|13097135|gb|AAH03342.1| Polymerase (DNA directed), delta 2, regulatory subunit [Mus
musculus]
gi|148708616|gb|EDL40563.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_a [Mus musculus]
Length = 469
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 119/172 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
F +K I +D+ V L++VPDF S++T ++NL +L C + E+
Sbjct: 408 PSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLACQPISFAGFGAEQ 459
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ D
Sbjct: 74 GSRVEVKKLCELQPG--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|297680540|ref|XP_002818047.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Pongo abelii]
Length = 504
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 323 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 383 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 443 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 493
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 109 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 166
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 167 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|397467135|ref|XP_003805282.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Pan paniscus]
Length = 504
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 323 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 383 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 443 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 493
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 109 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 166
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 167 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|344252518|gb|EGW08622.1| DNA polymerase delta subunit 2 [Cricetulus griseus]
Length = 487
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 306 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 365
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 366 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 425
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF S++T ++NL +L C + E
Sbjct: 426 PSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLACQPISFSGFGAE 476
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 92 GSGVGVKKLCELQPG--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDD 149
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 150 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGRFQVEDHCFA 197
>gi|379056381|ref|NP_006221.2| DNA polymerase delta subunit 2 isoform 2 [Homo sapiens]
Length = 504
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 323 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 383 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 443 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 493
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 109 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 166
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 167 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|380798219|gb|AFE70985.1| DNA polymerase delta subunit 2, partial [Macaca mulatta]
Length = 468
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 287 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 346
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 347 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 406
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 407 PSFGSKIIQGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 457
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 73 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 130
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 131 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 178
>gi|402863616|ref|XP_003896103.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Papio anubis]
Length = 469
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|388453065|ref|NP_001253222.1| DNA polymerase delta subunit 2 [Macaca mulatta]
gi|67970282|dbj|BAE01484.1| unnamed protein product [Macaca fascicularis]
gi|355560661|gb|EHH17347.1| DNA polymerase delta subunit 2 [Macaca mulatta]
gi|355747662|gb|EHH52159.1| DNA polymerase delta subunit 2 [Macaca fascicularis]
gi|383414205|gb|AFH30316.1| DNA polymerase delta subunit 2 [Macaca mulatta]
Length = 469
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|426356077|ref|XP_004045418.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 504
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 323 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 383 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 443 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 493
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 109 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 166
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 167 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|354485255|ref|XP_003504799.1| PREDICTED: DNA polymerase delta subunit 2-like [Cricetulus griseus]
Length = 469
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF S++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLACQPISFSGFGAE 458
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPG--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGRFQVEDHCFA 179
>gi|218681781|pdb|3E0J|A Chain A, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681783|pdb|3E0J|C Chain C, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681785|pdb|3E0J|E Chain E, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681787|pdb|3E0J|G Chain G, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
Length = 476
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 295 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 355 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 414
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 415 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 465
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 81 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 138
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 139 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 186
>gi|297680544|ref|XP_002818049.1| PREDICTED: DNA polymerase delta subunit 2 isoform 4 [Pongo abelii]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|397467137|ref|XP_003805283.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Pan paniscus]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|189055337|dbj|BAG35221.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|54262198|ref|NP_001005794.1| DNA-directed DNA polymerase delta 2 [Xenopus (Silurana) tropicalis]
gi|49522345|gb|AAH75341.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[Xenopus (Silurana) tropicalis]
gi|89272894|emb|CAJ83206.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[Xenopus (Silurana) tropicalis]
Length = 463
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 119/161 (73%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+ VD+MPG FDP N LPQQPLH C+FP+++ YST VTNPY E++G +GTSGQ
Sbjct: 288 GSVSVDVMPGAFDPTNYILPQQPLHRCMFPQSAVYSTLQLVTNPYEAEIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+SDI K+S++ + LDILE+TL+ GH+ PTAPDTL CYPFY +DP I+++CP VYF G+
Sbjct: 348 NISDIYKYSSMQDYLDILEWTLQVGHLCPTAPDTLGCYPFYKSDPFILQNCPHVYFCGSA 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
KF K + ++ + V L++VP+F S++T ++NL TL+C
Sbjct: 408 PKFSCKEVTGKEGQRVLLLTVPEFCSTQTACLVNLRTLQCQ 448
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V+V KL +L E+C ++GTLFK +L+P+IL+EISEE L+PQP ++SDSD
Sbjct: 74 GDDVAVRKLCELQ--GEEKCCVVGTLFKSMELQPSILREISEEHNLLPQPARHKYISDSD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLS 146
ELILEDELQRI L G D+ VTG V+A+ G+ GKF V D C + P +P LS
Sbjct: 132 ELILEDELQRIKLEGATDVQQLVTGAVLAVLGSEGDAGKFMVEDFCLTSLPAQSPLPRLS 191
Query: 147 NNENKYV 153
E+++V
Sbjct: 192 --EDRFV 196
>gi|187828568|ref|NP_001120690.1| DNA polymerase delta subunit 2 isoform 1 [Homo sapiens]
gi|379056383|ref|NP_001243808.1| DNA polymerase delta subunit 2 isoform 1 [Homo sapiens]
gi|1352307|sp|P49005.1|DPOD2_HUMAN RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|1008458|gb|AAC50216.1| DNA polymerase delta small subunit [Homo sapiens]
gi|9963918|gb|AAG09763.1| DNA polymerase delta small subunit [Homo sapiens]
gi|12653379|gb|AAH00459.1| Polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|21430983|gb|AAM51148.1| polymerase (DNA directed), delta 2, regulatory subunit (50kD) [Homo
sapiens]
gi|51094511|gb|EAL23767.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|119581522|gb|EAW61118.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|123982305|gb|ABM82925.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
gi|123997027|gb|ABM86115.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
gi|158258126|dbj|BAF85036.1| unnamed protein product [Homo sapiens]
gi|208965368|dbj|BAG72698.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|426356079|ref|XP_004045419.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|61556801|ref|NP_001013068.1| DNA polymerase delta subunit 2 [Rattus norvegicus]
gi|81884493|sp|Q6AXY4.1|DPOD2_RAT RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|50926203|gb|AAH79267.1| Polymerase (DNA directed), delta 2, regulatory subunit [Rattus
norvegicus]
gi|149047646|gb|EDM00316.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_a [Rattus norvegicus]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 118/172 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ Y+T VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYATLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFAECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
F +K I +D+ V L++VPDF S++T ++NL L C + E+
Sbjct: 408 PSFGSKVIRGPEDQAVLLVAVPDFSSTQTACLVNLRGLTCQPISFAGFGAEQ 459
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSQVEVKKLCELQPG--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVKDDGKFQVEDHCFA 179
>gi|350535889|ref|NP_001233397.1| DNA polymerase delta subunit 2 [Pan troglodytes]
gi|343958416|dbj|BAK63063.1| DNA polymerase subunit delta 2 [Pan troglodytes]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|343960915|dbj|BAK62047.1| DNA polymerase subunit delta 2 [Pan troglodytes]
Length = 469
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFNATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|291394901|ref|XP_002713893.1| PREDICTED: DNA-directed DNA polymerase delta 2 [Oryctolagus
cuniculus]
Length = 469
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 115/160 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLAILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
F +K I +D+ V L++VPDF +++T ++NL +L C
Sbjct: 408 PSFGSKVIRGPEDQTVLLVAVPDFSATQTACLVNLRSLAC 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + +V D
Sbjct: 74 GSGTEVKKLCELQSG--EQCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYVHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+L+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 QLVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSVKDDGKFLVEDHCFA 179
>gi|417401440|gb|JAA47606.1| Putative dna polymerase delta regulatory subunit 55 [Desmodus
rotundus]
Length = 467
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GT+GQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTAGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKVIRGPEDQTVLLVAVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + + G +V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVTRAQQQWGAAVRVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DELILEDELQRI L G ID+ VTG V+A+ G +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELILEDELQRIRLEGTIDVSKLVTGTVLAMLGAVGDDGKFLVEDHCFA 179
>gi|194389848|dbj|BAG60440.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 254 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 313
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 314 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 373
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 374 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 424
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 30 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 89
V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL
Sbjct: 42 GVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDEL 99
Query: 90 ILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 100 VLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 145
>gi|332239430|ref|XP_003268906.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Nomascus
leucogenys]
gi|441650322|ref|XP_004091010.1| PREDICTED: DNA polymerase delta subunit 2 [Nomascus leucogenys]
Length = 469
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 117/171 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRNLACQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|296209176|ref|XP_002751421.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Callithrix
jacchus]
Length = 469
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF G+
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFAECPHVYFCGST 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKVIRGPEDQKVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPSRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|194209519|ref|XP_001915605.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta subunit 2-like
[Equus caballus]
Length = 469
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 117/171 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S + + L+ILE+TLR H++PTAPDTL CYPFY DP + CP VYF GN
Sbjct: 348 NVSDIFRYSGMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFVFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGLEDQTVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G V + KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVSRAQQRWGSGVQIKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DELILEDELQRI L G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 122 PRSKYIHPDDELILEDELQRIKLEGTIDVSKLVTGTVLAVLGSVRDDGKFQVEDHCFA 179
>gi|410951892|ref|XP_003982626.1| PREDICTED: DNA polymerase delta subunit 2 [Felis catus]
Length = 469
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 117/171 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRIRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K +D+ V L++VPDF S++T ++NL +L C + E
Sbjct: 408 PSFGSKIFRGPEDQRVLLVAVPDFSSTQTACLVNLRSLACQPISFSGFGAE 458
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V + KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GAGVQIKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLEGTIDVCKLVTGTVLAVLGSVRDTGKFLVEDHCFA 179
>gi|403278466|ref|XP_003930826.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403278468|ref|XP_003930827.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 469
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF G+
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFAECPHVYFCGST 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQKVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVEVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|440903070|gb|ELR53777.1| DNA polymerase delta subunit 2 [Bos grunniens mutus]
Length = 469
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TL+ H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVSRAQQRWGSGVLVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DELILEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELILEDELQRIKLEGTIDVSKLVTGTVLAVLGSVGDDGKFLVEDHCFA 179
>gi|164450483|ref|NP_776853.2| DNA polymerase delta subunit 2 [Bos taurus]
gi|109940074|sp|P49004.2|DPOD2_BOVIN RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|88758648|gb|AAI13316.1| Polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Bos
taurus]
gi|296488357|tpg|DAA30470.1| TPA: DNA polymerase delta subunit 2 [Bos taurus]
Length = 469
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TL+ H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVSRAQQRWGSGVLVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DELILEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELILEDELQRIKLEGTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|312378279|gb|EFR24900.1| hypothetical protein AND_10208 [Anopheles darlingi]
Length = 453
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VDLMPGEFDPAN +PQQP+H CLFP+++++++FH V NPY FE+ G+ ++GTSGQ
Sbjct: 280 SVPVDLMPGEFDPANHMIPQQPMHQCLFPQSAEFASFHGVPNPYAFELAGRQIVGTSGQN 339
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V D+ +FS + NPL+ L+ TLR H+ PTAPDTL CYP+Y DP I+ CP VYF GN
Sbjct: 340 VLDVMRFSKIENPLEALKATLRWSHLFPTAPDTLPCYPYYQKDPFILSECPHVYFAGNCG 399
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH--SLVVEDLTE 325
F T+ + RLI VP F +++A++NL T+EC S VE +
Sbjct: 400 DFMTEQWASANGQTTRLICVPSFSEQQSIAVVNLRTMECKKVSFAVESFGD 450
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 25 IEK-GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 83
+EK GK + + +L+DL E ++CVIIGTLFKHQ+LKP+IL+EISEE +L PQP +H+
Sbjct: 61 VEKWGKEMPIKRLADLREECPQKCVIIGTLFKHQELKPSILREISEENQLAPQPPRSHYT 120
Query: 84 SDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D D LILED LQRI L GNID+H+ VTGVV A+ G +G+F V D +
Sbjct: 121 DDKDILILEDALQRIRLVGNIDVHSVVTGVVCALLGYQESDGRFFVEDYLF 171
>gi|301777308|ref|XP_002924069.1| PREDICTED: DNA polymerase delta subunit 2-like [Ailuropoda
melanoleuca]
gi|281340684|gb|EFB16268.1| hypothetical protein PANDA_013317 [Ailuropoda melanoleuca]
Length = 469
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
+F +K +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PEFGSKIFRGPEDQRVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAE 458
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GGGVQVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G+ID VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLEGSIDSSKLVTGTVLAVLGSARDSGKFLVEDHCFA 179
>gi|432092626|gb|ELK25161.1| DNA polymerase delta subunit 2 [Myotis davidii]
Length = 469
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GT+GQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTAGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY +DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKSDPFIFLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIRGPEDQTVLLVAVPDFSATQTACLVNLRSLVCQPISFSGFGAE 458
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + + G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVSRAQQQWGSGVLVRKLCELQPA--EQCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DEL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELVLEDELQRIRLEGTIDVSRLVTGTVLAVLGSVRDDGKFLVEDHCFA 179
>gi|148708617|gb|EDL40564.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_b [Mus musculus]
Length = 192
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 119/172 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 11 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 70
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 71 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNT 130
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
F +K I +D+ V L++VPDF S++T ++NL +L C + E+
Sbjct: 131 PSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLACQPISFAGFGAEQ 182
>gi|148233344|ref|NP_001080101.1| DNA polymerase delta subunit 2 [Xenopus laevis]
gi|13431459|sp|O93610.1|DPOD2_XENLA RecName: Full=DNA polymerase delta subunit 2; AltName: Full=XlCdc1
gi|3718033|emb|CAA09373.1| XlCdc1 [Xenopus laevis]
gi|28703913|gb|AAH47262.1| Pold2-prov protein [Xenopus laevis]
Length = 463
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+ VD+MPG FDP N LPQQPLH C+FP+++ YST VTNPY E++G +GTSGQ
Sbjct: 288 GSVSVDVMPGAFDPTNYILPQQPLHRCMFPQSALYSTLQLVTNPYEAEIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI K+S++ + LDILE+TL+ GH+ PTAPDTL CYPFY +DP I+++CP VYF G+
Sbjct: 348 NIGDIYKYSSMQDYLDILEWTLQVGHLCPTAPDTLGCYPFYKSDPFILQNCPHVYFCGSA 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
KF K + + + V L++VP+F S++T ++NL TL+C
Sbjct: 408 PKFSCKEVTGAEGQRVLLLTVPEFCSTQTACLVNLRTLQCQ 448
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K+ + G ++V KL +L E+C +IGTLFK +L+P+IL+EISEE L+PQP
Sbjct: 67 KSAKQRWGDDIAVRKLCELQ--GGEKCCVIGTLFKSMELQPSILREISEEHNLLPQPARQ 124
Query: 81 HFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVF 139
++SDSDELILEDELQRI L G D+ VTG V+A+ G GKF V D C + PV
Sbjct: 125 KYISDSDELILEDELQRIKLEGATDVQQLVTGAVLAVLGAEEDAGKFVVEDFCLTSLPVQ 184
Query: 140 NPRTTLSNNENKYV 153
+P LS E+++V
Sbjct: 185 SPLPRLS--EDRFV 196
>gi|410928120|ref|XP_003977449.1| PREDICTED: DNA polymerase delta subunit 2-like [Takifugu rubripes]
Length = 471
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N TLPQQPLHPC+FP +S Y T H V+NPY +++G ++GTSGQ
Sbjct: 290 ASVPVDVMPGQYDPTNYTLPQQPLHPCMFPLSSAYPTLHLVSNPYQADIDGVRVLGTSGQ 349
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI ++S++ N LDILE TL+ H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 350 NVRDIQRYSSMDNHLDILEETLQLQHMAPTAPDTLGCYPFYQKDPFILEECPHVYFSGNA 409
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
F++K I + V L++VP+F ++T ++NL TL C
Sbjct: 410 PTFQSKIITGAGGQEVLLVTVPEFSGTQTACLVNLRTLSC 449
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
++ + + G V + KL DL E+C I+GTLFK +L+P+ILKEIS+EL L+PQP
Sbjct: 68 SEAAQQKWGAEVPIKKLCDLQAG--EQCCIVGTLFKGMELQPSILKEISDELNLLPQPAR 125
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PV 138
++S++D+LILEDELQRI L G ID VTG V+A+ G +G F V D C A P
Sbjct: 126 VKYISETDKLILEDELQRIKLEGKIDRDKCVTGSVIAVYGAEKNDGIFTVEDFCTADFPA 185
Query: 139 FNPRTTLS 146
PR LS
Sbjct: 186 QTPRPALS 193
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E CP VYF+GN F++K I G+ V ++ + + + T T V + TL
Sbjct: 396 ILEECPHVYFSGNAPTFQSKIITGAGGQEVLLVTVPEFSGTQTACLVNLRTL 447
>gi|149047647|gb|EDM00317.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_b [Rattus norvegicus]
Length = 192
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 118/172 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ Y+T VTNPY ++G +GTSGQ
Sbjct: 11 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYATLQLVTNPYQATIDGVRFLGTSGQ 70
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 71 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFAECPHVYFCGNT 130
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
F +K I +D+ V L++VPDF S++T ++NL L C + E+
Sbjct: 131 PSFGSKVIRGPEDQAVLLVAVPDFSSTQTACLVNLRGLTCQPISFAGFGAEQ 182
>gi|170047774|ref|XP_001851385.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
gi|167870072|gb|EDS33455.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
Length = 455
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 114/160 (71%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VDLMPGEFDP+N LPQQP+H C+FP + + +F V NPY FE+ G+L++GT+GQ
Sbjct: 282 SVNVDLMPGEFDPSNHMLPQQPMHQCMFPRSIPFQSFRGVPNPYAFEIAGRLIVGTAGQN 341
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V DIA++S + +PL+ LE TL H+APTAPDTL CYP+Y DP I+ CP VYF GN +
Sbjct: 342 VHDIARYSKIESPLEALESTLIWSHLAPTAPDTLPCYPYYQQDPFIVAECPHVYFAGNVA 401
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
+F TK E + + RL+ VP F + T+A++NL TL+C
Sbjct: 402 EFGTKLWEGPEGQRTRLVCVPSFADTHTIAVVNLRTLDCQ 441
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 82/112 (73%)
Query: 23 IEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
+E + G V +L+DL E + E+CV+IGTLFKHQ+LKP+IL+EISEE +L PQP +H+
Sbjct: 62 VEHKWGSKYPVKQLADLKEDNPEQCVLIGTLFKHQELKPSILREISEENQLAPQPPRSHY 121
Query: 83 VSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D+D LILED LQRI L G +D+H+ VTGVV A++G G+G+F V + +
Sbjct: 122 TDDADILILEDALQRIRLFGKLDVHSVVTGVVCAVRGYEDGDGRFHVEEYLF 173
>gi|157133194|ref|XP_001662794.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108870916|gb|EAT35141.1| AAEL012669-PA [Aedes aegypti]
Length = 455
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 113/162 (69%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VDLMPGEFDPAN LPQQP+H C+FP+A +++F V NPY E+ G+ ++GTSGQ
Sbjct: 282 SVNVDLMPGEFDPANHMLPQQPMHQCMFPKAVSFTSFRGVPNPYALEIAGRSILGTSGQN 341
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V DIA++S + NPL+ L+ TL H+APTAPDTL CYP+Y DP +I CP VYF GN
Sbjct: 342 VHDIARYSKIENPLEALKSTLVWSHIAPTAPDTLPCYPYYQQDPFVISECPHVYFAGNTG 401
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
+F T+ + + RLI VP F + +VA++NL TL+C +
Sbjct: 402 EFRTELWKGSNGQQTRLICVPSFSETHSVAVVNLRTLDCQQI 443
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 83/115 (72%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T+ ++ + G + +L++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP
Sbjct: 59 TERVKEKWGTEHPIKQLAELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPR 118
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+H+ D+D LILED LQRI L G +D+H+ VTG V A+ G G+G+F+V D +
Sbjct: 119 SHYTDDADILILEDALQRIRLMGKMDVHSVVTGAVCAVLGYEDGDGRFRVEDYLF 173
>gi|157116364|ref|XP_001658441.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108876528|gb|EAT40753.1| AAEL007541-PA [Aedes aegypti]
Length = 458
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VDLMPGEFDPAN LPQQP+H C+FP+A +++F V NPY E+ G+ ++GTSGQ
Sbjct: 285 SVNVDLMPGEFDPANHMLPQQPMHQCMFPKAVSFTSFRGVPNPYAMEIAGRSILGTSGQN 344
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V DIA++S + NPL+ L+ TL H+APTAPDTL CYP+Y DP +I CP VYF GN
Sbjct: 345 VHDIARYSKIENPLEALKSTLIWSHIAPTAPDTLPCYPYYQQDPFVISECPHVYFAGNTG 404
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE----DLTEE 326
+F T+ + + RLI VP F + +VA++NL TL+C + + D TEE
Sbjct: 405 EFRTELWKGSNGQQTRLICVPSFSETDSVAVVNLRTLDCQQICFKVNEFDDTEE 458
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T+ ++ + G + +L++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP
Sbjct: 59 TERVKEKWGTEHPIKQLAELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPR 118
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPV---GNGKFKVSDVCY 134
+H+ D+D LILED LQRI L G ID+H+ VTG V A+ G G+G+F+V D +
Sbjct: 119 SHYTDDADILILEDALQRIRLMGKIDVHSVVTGAVCAVLGVDSYEDGDGRFRVEDYLF 176
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
+I CP VYF GN +F T+ + G+ ++ + +ETD+ V + TL
Sbjct: 389 FVISECPHVYFAGNTGEFRTELWKGSNGQQTRLICVPSFSETDSVAVVNLRTL 441
>gi|351706194|gb|EHB09113.1| DNA polymerase delta subunit 2 [Heterocephalus glaber]
Length = 469
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 115/161 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+ P A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMLPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFICLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F +K I +D+ V L++VPDF +++T ++NL +L C
Sbjct: 408 PSFGSKIIRGSEDQMVLLVAVPDFSTTQTACLVNLRSLACQ 448
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSGVGVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G IDI VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDISKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|157116366|ref|XP_001658442.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108876529|gb|EAT40754.1| AAEL007541-PB [Aedes aegypti]
Length = 455
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VDLMPGEFDPAN LPQQP+H C+FP+A +++F V NPY E+ G+ ++GTSGQ
Sbjct: 282 SVNVDLMPGEFDPANHMLPQQPMHQCMFPKAVSFTSFRGVPNPYAMEIAGRSILGTSGQN 341
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V DIA++S + NPL+ L+ TL H+APTAPDTL CYP+Y DP +I CP VYF GN
Sbjct: 342 VHDIARYSKIENPLEALKSTLIWSHIAPTAPDTLPCYPYYQQDPFVISECPHVYFAGNTG 401
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE----DLTEE 326
+F T+ + + RLI VP F + +VA++NL TL+C + + D TEE
Sbjct: 402 EFRTELWKGSNGQQTRLICVPSFSETDSVAVVNLRTLDCQQICFKVNEFDDTEE 455
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 83/115 (72%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T+ ++ + G + +L++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP
Sbjct: 59 TERVKEKWGTEHPIKQLAELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPR 118
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+H+ D+D LILED LQRI L G ID+H+ VTG V A+ G G+G+F+V D +
Sbjct: 119 SHYTDDADILILEDALQRIRLMGKIDVHSVVTGAVCAVLGYEDGDGRFRVEDYLF 173
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
+I CP VYF GN +F T+ + G+ ++ + +ETD+ V + TL
Sbjct: 386 FVISECPHVYFAGNTGEFRTELWKGSNGQQTRLICVPSFSETDSVAVVNLRTL 438
>gi|350529379|ref|NP_001231925.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Sus
scrofa]
Length = 471
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 116/171 (67%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 290 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 349
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI ++S + + L+ILE+TL+ H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 350 NVGDIFRYSGMEDHLEILEWTLQIRHISPTAPDTLGCYPFYKTDPFIFLECPHVYFCGNT 409
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I +D+ V L++VPDF S++T ++NL +L C + E
Sbjct: 410 PSFGSKIIRGPEDQTVLLVAVPDFSSTQTACLVNLRSLTCQPISFSGFGAE 460
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ D
Sbjct: 76 GGGVVVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDD 133
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
ELILEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 134 ELILEDELQRIKLEGAIDVSKLVTGTVLALLGSAGDDGKFLVEDHCFA 181
>gi|363747285|ref|XP_003643965.1| PREDICTED: DNA polymerase delta subunit 2-like [Gallus gallus]
Length = 466
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 116/161 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ VD+MPGEFDP N TLPQQPLH C+ P +S Y T VTNPY +M+G +GTSGQ
Sbjct: 287 SSVPVDVMPGEFDPTNYTLPQQPLHRCMLPLSSAYPTLQLVTNPYQADMDGVRFLGTSGQ 346
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+SDI K+S++ + L+ILE+TL GH++PTAPDTL CYPFY++DP I+ CP VYF GN
Sbjct: 347 NISDIFKYSSMDDYLEILEWTLLAGHISPTAPDTLGCYPFYNSDPFILTDCPHVYFCGNA 406
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
KF++K + E + V L++VP F +++T ++NL L C
Sbjct: 407 PKFQSKLLTGEDGQRVLLVAVPAFSATQTACLVNLRDLSCQ 447
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
+ + G V + KL L E C ++GTLFK +L+P+IL+EI+EE LVPQP
Sbjct: 66 QQARLRWGDGVLLRKLCQLQVG--ERCCVVGTLFKAMRLQPSILQEINEEHNLVPQPSLA 123
Query: 81 HFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+V SDEL+LEDELQRI L G+I+ VTG V+A+ G +GKF V + C+A
Sbjct: 124 KYVDPSDELVLEDELQRIKLTGSIEASRLVTGAVLAVYGHEQEDGKFLVEEHCFA 178
>gi|449437575|ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus]
gi|449526900|ref|XP_004170451.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus]
Length = 438
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 115/163 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN +LPQQPLH CLFP +S Y+TF TNP+ FE++ +GTSGQ
Sbjct: 269 AGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+ +E TLR H+APTAP+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 329 NVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
KF+T+ ++ + + VRLI++P F + +LNL LECH+L
Sbjct: 389 EKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTL 431
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +ECVI+GT++KH +LKP IL E S+E +P + +F+ D L+LEDE R+
Sbjct: 67 LGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRV 126
Query: 99 PLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
L G++ + + VTG+V+A+ G G F V D+ A L ++E+KYV
Sbjct: 127 KLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYV 182
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+IESCP VYF GNQ KF+T+ ++ +G+ V ++ + ET
Sbjct: 374 FLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCET 415
>gi|1008460|gb|AAC48475.1| DNA polymerase delta small subunit [Bos taurus]
Length = 469
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 118/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TL+ H++PTAPDTL CYP Y DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYPSYKTDPFIFPECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I+ +D+ V L++VPDF +++T ++NL +L C + E
Sbjct: 408 PSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLGSLACQPISFSGFGAE 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLVSRAQQRWGSGVLVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DELILEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELILEDELQRIKLEGTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|291238172|ref|XP_002738996.1| PREDICTED: DNA-directed DNA polymerase delta 2-like [Saccoglossus
kowalevskii]
Length = 465
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 115/163 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S + VD+MPGE+DPAN T+PQQP C+FP++ Y T PVTNPY E+ G +GTSGQ
Sbjct: 281 SCLPVDIMPGEYDPANYTMPQQPFPRCMFPQSRCYPTLEPVTNPYDVEIAGIRFLGTSGQ 340
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI +FS + + L+ILE TL H+APTAPDTL CYPFY+ DP II CP +YF GNQ
Sbjct: 341 NIHDIYQFSAMEDKLEILEKTLLTCHIAPTAPDTLGCYPFYEKDPFIITQCPHIYFAGNQ 400
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
S+F+TKT+++ + V L+++P F S T ++NL TLEC +
Sbjct: 401 SEFKTKTVDLITGQKVLLVTIPKFSESYTCVLVNLRTLECQPM 443
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T+ + + G ++ + KL DL E+C +IGTLFKH LKP+ILKEISEE+ L+PQP
Sbjct: 60 TRAAKKKWGDAIRLKKLCDLKLG--EKCCVIGTLFKHMNLKPSILKEISEEINLMPQPVK 117
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ + +SD LILEDELQRI L G +D+H VTG++VA+ G G F+V D CYA
Sbjct: 118 SKYTDESDVLILEDELQRITLVGKLDVHTAVTGIIVAVYGCEKDGGLFQVDDFCYA 173
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
II CP +YF GNQS+F+TKT+++ G+ V ++ + +E+ T CV++
Sbjct: 387 IITQCPHIYFAGNQSEFKTKTVDLITGQKVLLVTIPKFSESYT--CVLV 433
>gi|449488069|ref|XP_002196136.2| PREDICTED: DNA polymerase delta subunit 2 [Taeniopygia guttata]
Length = 468
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLH C+ P AS Y+T VTNPY ++G +GTSGQ
Sbjct: 288 TSVPVDVMPGEFDPTNYTLPQQPLHRCMLPLASAYATLRLVTNPYQASLDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+SDI K+S++ + L+ILE+TL GH++PTAPDTL CYPFY +DP I+ CP VYF GN
Sbjct: 348 NISDIFKYSSMDDYLEILEWTLLAGHISPTAPDTLGCYPFYKSDPFILTECPHVYFCGNA 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F++K ++ ++ + V L++VPDF +++T ++NL L C
Sbjct: 408 PHFQSKLLQGKEGQRVLLLTVPDFSATQTACLVNLHDLSCQ 448
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 9 VYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEIS 68
V G + E + G V + +LS+L E E+C ++GTLFK QL+P+IL+EIS
Sbjct: 56 VRLAGMRPGLERRA-RSRWGNDVVLRRLSELQEG--EKCCVVGTLFKSMQLQPSILQEIS 112
Query: 69 EELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFK 128
EE LVPQP ++ SDELILEDELQRI L G ID+ VTG +VA+ G NG+F
Sbjct: 113 EEHNLVPQPPLPKYIQPSDELILEDELQRIKLEGAIDVQRLVTGTIVAVYGCEQDNGRFL 172
Query: 129 VSDVCYA 135
V D C+A
Sbjct: 173 VEDHCFA 179
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVI 49
I+ CP VYF GN F++K ++ ++G+ V +L + D + T T C++
Sbjct: 393 FILTECPHVYFCGNAPHFQSKLLQGKEGQRVLLLTVPDFSATQT-ACLV 440
>gi|327279029|ref|XP_003224261.1| PREDICTED: DNA polymerase delta subunit 2-like [Anolis
carolinensis]
Length = 473
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 115/160 (71%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPGEFDP N TLPQQPLH C+FP +S YST VTNPY ++G +GTSGQ
Sbjct: 290 SVPVDVMPGEFDPTNYTLPQQPLHRCMFPLSSAYSTLQLVTNPYQANIDGIRFLGTSGQN 349
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
++DI K+S++S+ L+ILE+TLR GH++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 350 INDIFKYSSMSDYLEILEWTLRIGHLSPTAPDTLGCYPFYKTDPFIFTDCPHVYFCGNAH 409
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F++K ++ + + V L+++PDF ++T ++NL L C
Sbjct: 410 SFKSKVVKGDDGQKVLLLTLPDFSITQTACLINLRDLTCQ 449
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 7/121 (5%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G +++V KL +L E+C ++GTLFK QL+P+IL+EISEE L PQP T ++ SD
Sbjct: 75 GSNITVKKLCELQVA--EKCCVVGTLFKSMQLQPSILREISEEHNLPPQPPRTKYIHQSD 132
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-----TPVFNPR 142
ELILEDELQRI L GNI I VTG ++A+ G+ +GKF V D C+A P+ P
Sbjct: 133 ELILEDELQRIKLEGNIQIDKLVTGTILAVYGSEGDDGKFLVEDHCFADMPTQLPMMGPN 192
Query: 143 T 143
T
Sbjct: 193 T 193
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVI 49
I CP VYF GN F++K ++ + G+ V +L L D + T T C+I
Sbjct: 395 IFTDCPHVYFCGNAHSFKSKVVKGDDGQKVLLLTLPDFSITQT-ACLI 441
>gi|348560136|ref|XP_003465870.1| PREDICTED: DNA polymerase delta subunit 2-like [Cavia porcellus]
Length = 469
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 117/171 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+ P A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMLPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I CP VYF GN
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFICLECPHVYFCGNT 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F ++ I +D+ V L+++PDF +++T ++NL +L C + E
Sbjct: 408 PSFGSRVIRGPEDQMVLLVAIPDFSATQTACLVNLRSLACQPISFAGFGAE 458
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + + G V + KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP
Sbjct: 64 FLVSRAQQQWGSGVPLKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DEL+LEDELQRI L G ID+ VTG V+A+ G +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELVLEDELQRIKLKGAIDVSRLVTGTVLAVCGFVQDDGKFLVEDHCFA 179
>gi|443695395|gb|ELT96314.1| hypothetical protein CAPTEDRAFT_168965 [Capitella teleta]
Length = 469
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S +EVDLMPGE DPAN++LPQQPLH C+FPE+ ++ T H V+NPY +++G L+ GTSGQ
Sbjct: 288 SCMEVDLMPGEHDPANSSLPQQPLHRCMFPESLRFPTMHCVSNPYSCKVDGCLITGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCPDVYFTGN 274
P+ DI KFS++ + L ILE TL+C H+APTAPDTLACYP+ D DP++I + CPDV+F N
Sbjct: 348 PIHDIYKFSSMEDHLQILETTLKCTHLAPTAPDTLACYPYSDMDPLVISDDCPDVFFASN 407
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLV 319
KF+ K E + + V L+ VP F ++T ++N TL+C S+
Sbjct: 408 MPKFQHKIFEGPEGQRVLLLCVPRFSETQTCVLVNTRTLDCESIA 452
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K + + G S + KL DL +T CV+IGTLFKH LKP+ILKEISE+ L+P P
Sbjct: 66 KVAKEKWGDSAPIRKLCDLQTGET--CVVIGTLFKHMDLKPSILKEISEDHSLMPLPPRA 123
Query: 81 HFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKG-TPVGN-GKFKVSDVCYATPV 138
+ +SD LILEDELQRI L G+ID+ VTG +VA+ G P N GKF V + +
Sbjct: 124 KYTDESDSLILEDELQRIVLQGDIDVQALVTGALVAVYGEEPDDNRGKFNVKEFSFPPLP 183
Query: 139 FNPRTTLSNNENKYVNHSSIEV 160
P LS N+ V S +++
Sbjct: 184 CQPERPLSGNDKYIVLTSGLDI 205
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGT 52
+I + CPDV+F N KF+ K E +G+ V +L + +ET T CV++ T
Sbjct: 394 VISDDCPDVFFASNMPKFQHKIFEGPEGQRVLLLCVPRFSETQT--CVLVNT 443
>gi|431909930|gb|ELK13026.1| DNA polymerase delta subunit 2 [Pteropus alecto]
Length = 469
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 117/171 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GT+GQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTAGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE+TLR H++PTAPDTL CYPFY DP I+ CP VYF G+
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFILLECPHVYFCGSA 407
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
F +K I + + V L++VPDF +++T ++NL L C + E
Sbjct: 408 PHFGSKVIRGPEGQTVLLVAVPDFSATQTACLVNLRHLACQPISFSGFGAE 458
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + G V + KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP
Sbjct: 64 FLASRAQQHWGSGVPIKKLFELQPG--EKCCVVGTLFKAMPLQPSILREVSEEHCLLPQP 121
Query: 78 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ ++ DEL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 122 PRSKYIHPDDELVLEDELQRIRLEGTIDVSKLVTGTVLAVLGSVRDDGKFAVEDRCFA 179
>gi|225441449|ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 114/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + +D+MPG DPAN +LPQQPLH CLFP +S Y++F TNP+ FE+E +GTSGQ
Sbjct: 269 AGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+ +E TLR H+APTAP+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 329 NVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ I+ + + VRLI +P F + +LN+ LECH+L
Sbjct: 389 DKYETRLIKGSEGQVVRLICIPKFCETGVAVVLNMRNLECHAL 431
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +EC+I+GTL+KH +LKP IL E S+E + P + +F+ D L+LEDE R+
Sbjct: 67 LGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRV 126
Query: 99 PLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
L G + + + VTG VV + G G+F V D+ A L + E+KYV
Sbjct: 127 KLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYV 182
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+IESCP VYF GNQ K+ET+ I+ +G+ V ++ + ET
Sbjct: 374 FLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCET 415
>gi|147776498|emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 114/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + +D+MPG DPAN +LPQQPLH CLFP +S Y++F TNP+ FE+E +GTSGQ
Sbjct: 269 AGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+ +E TLR H+APTAP+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 329 NVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ I+ + + VRLI +P F + +LN+ LECH+L
Sbjct: 389 DKYETRLIKGSEGQVVRLICIPKFCETGVAVVLNMRNLECHAL 431
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +EC+I+GTL+KH +LKP IL E S+E + P + +F+ D L+LEDE R+
Sbjct: 67 LGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRV 126
Query: 99 PLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
L G + + + VTG VV + G G+F V D+ A L + E+KYV
Sbjct: 127 KLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYV 182
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+IESCP VYF GNQ K+ET+ I+ +G+ V ++ + ET
Sbjct: 374 FLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCET 415
>gi|158299560|ref|XP_319657.4| AGAP008910-PA [Anopheles gambiae str. PEST]
gi|157013576|gb|EAA14861.4| AGAP008910-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 113/162 (69%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ +DLMPGEFDPAN LPQQP+H CLFP + +++F V NPY F++ + ++GTSGQ
Sbjct: 286 SVPIDLMPGEFDPANHMLPQQPMHHCLFPRSKGFASFRGVPNPYAFDLADRYVVGTSGQN 345
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V D+ ++S + +PL+ L+ TLR GH+ PTAPDTL CYP+Y+ DP II CP VYF GN
Sbjct: 346 VLDVMRYSKIESPLEALKATLRWGHLIPTAPDTLPCYPYYEKDPFIIGECPHVYFAGNVG 405
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
+F T+ + RL+ VP F S++VA++NL T+EC +
Sbjct: 406 EFSTEMWTGAGGQQTRLVCVPSFADSQSVAVVNLRTMECRKV 447
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 22 TIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH 81
+++ + G + + +L+DL E +CVIIGTLFKHQ+LKP+IL+EISEE +L PQP +H
Sbjct: 62 SVQKKWGTEMPIKRLADLREDCPHKCVIIGTLFKHQELKPSILREISEENQLAPQPPRSH 121
Query: 82 FVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGT---PVGNGKFKVSDVCY 134
+ +D+D LILED LQRI L G ID+H+ VTGVV A+ G +G+F V D +
Sbjct: 122 YTNDNDILILEDALQRIKLVGKIDVHSIVTGVVCAVMGKFWYEESDGRFFVEDYIF 177
>gi|195998648|ref|XP_002109192.1| hypothetical protein TRIADDRAFT_52972 [Trichoplax adhaerens]
gi|190587316|gb|EDV27358.1| hypothetical protein TRIADDRAFT_52972 [Trichoplax adhaerens]
Length = 448
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 114/160 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S I VD+MPGEFDP+N +PQQPLHPC+FP+ ++S+ VTNPY F ++G +GTSGQ
Sbjct: 278 SCIPVDIMPGEFDPSNHIMPQQPLHPCMFPKGFQFSSLKSVTNPYEFSVDGVRFLGTSGQ 337
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI ++S + L+I E LR GH++PTAPDTLACYP+Y+ DP I+ESCP VYF GNQ
Sbjct: 338 NIDDIYRYSYFEDRLEICEQCLRWGHISPTAPDTLACYPYYEKDPFILESCPHVYFVGNQ 397
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
+F K I ++++ V L++VP F + ++N TL+C
Sbjct: 398 PEFSCKKITGDQEQEVLLVNVPSFNQKHSCVLVNTRTLDC 437
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G ++ KL +L +T C IIGTLFK +PNIL+EIS+E L+P P T + DSD
Sbjct: 62 GNDINYCKLMEL-KTGITSC-IIGTLFKRMSARPNILQEISDEYNLIPLPPRTKYADDSD 119
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLS 146
EL+ EDE QRI L GNI++ VTGV+VA+ G + GKF V+++ A P PR +
Sbjct: 120 ELVAEDETQRISLTGNINVTKSVTGVIVALLGKELDGGKFYVNEMVSAGLPKQIPRPFIH 179
Query: 147 NNENKYV 153
N +KY+
Sbjct: 180 N--DKYI 184
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGT 52
I+ESCP VYF GNQ +F K I ++ + V ++ + N+ + CV++ T
Sbjct: 383 FILESCPHVYFVGNQPEFSCKKITGDQEQEVLLVNVPSFNQKHS--CVLVNT 432
>gi|194864974|ref|XP_001971198.1| GG14822 [Drosophila erecta]
gi|190652981|gb|EDV50224.1| GG14822 [Drosophila erecta]
Length = 431
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 113/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG FDPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 263 SLPVDIMPGAFDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 322
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + LD L TL GHVAPTAPDTLACYP+ D+DP I+ CP VYF GN
Sbjct: 323 VSDLLRSTSLDSALDALRCTLTWGHVAPTAPDTLACYPYIDSDPFIMRECPHVYFAGNCE 382
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E + K RL+ VP F +++VA++NL TL+C
Sbjct: 383 SFATELHEGAEGKRTRLVCVPSFSRTQSVAVVNLDTLDCR 422
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGQLNGQFLATGVVCAALGGTDSEGFFNVEDMLF 157
>gi|328715058|ref|XP_001950214.2| PREDICTED: DNA polymerase delta subunit 2-like [Acyrthosiphon
pisum]
Length = 451
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+++V +MPGEFDP + TLPQQ H CLFP+AS+YS+ H VTNP FE+EG L++G+SGQ
Sbjct: 282 STVDVQIMPGEFDPTDRTLPQQAFHRCLFPKASEYSSLHRVTNPNQFEIEGHLIIGSSGQ 341
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ +F+NL +P+DI++ L GH P+APDT+ CYPF DP II+ PDV+F NQ
Sbjct: 342 TVQDVFRFTNLEDPIDIMDKILDWGHQIPSAPDTIPCYPFEGQDPFIIKEMPDVFFVSNQ 401
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F+T K RLISVP F S++T +LNL+ LECH
Sbjct: 402 QSFQTSLKTNGSGKPTRLISVPSFSSTQTCILLNLNNLECH 442
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 101/139 (72%), Gaps = 8/139 (5%)
Query: 23 IEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
I+ + G+ + KLS+L++ +EC+I+GTLFKHQ+LKP+ILKEISEE L+PQP THF
Sbjct: 57 IQQKWGERCDIYKLSELHDKIGKECIIVGTLFKHQELKPSILKEISEENNLIPQPPRTHF 116
Query: 83 VSDSDELILEDELQRIP-----LHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
VSD+DE+ILEDELQR+P L+GN + ++N +TG ++A+KG P GKF V D C+ T
Sbjct: 117 VSDTDEIILEDELQRVPLTFDGLNGNSLSLNNIMTGCIIAVKGIPQDGGKFDVLDFCWPT 176
Query: 137 P--VFNPRTTLSNNENKYV 153
P + TT S+ +++++
Sbjct: 177 PSAAYKALTTRSSGDDRFL 195
>gi|357509943|ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
gi|355500275|gb|AES81478.1| DNA polymerase delta small subunit [Medicago truncatula]
Length = 454
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 113/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + +D+MPG DPAN +LPQQ LH CLFP +S Y+TF TNP+ FE++G +GTSGQ
Sbjct: 263 AGLPLDIMPGPCDPANFSLPQQALHKCLFPGSSVYNTFKSCTNPHCFELDGIRFLGTSGQ 322
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + LD +E TLR H+APTAP+TL CYP+ D DP IESCP VYF GNQ
Sbjct: 323 NVDDLEKYSEAKDKLDFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQ 382
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K++T+ I+ + + VRL+ VP F + +LNL LECH+L
Sbjct: 383 DKYDTRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLECHAL 425
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +ECVI+GTLFK+ +LKP IL E S++ + VP H +FV + D L+LEDE R+
Sbjct: 63 LGLEEGKECVIVGTLFKNMKLKPCILDEYSKQ-RSVPVKSH-NFVHEDDYLVLEDESGRV 120
Query: 99 PLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
L G+I + + VTG+VVA+ G G G F V +V A + + E+KYV
Sbjct: 121 KLGGSIIVPSVYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDKYV 176
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
IESCP VYF GNQ K++T+ I+ +G+ V ++ + +ET
Sbjct: 368 FFIESCPHVYFVGNQDKYDTRVIKGSEGQLVRLVCVPKFSET 409
>gi|414864556|tpg|DAA43113.1| TPA: hypothetical protein ZEAMMB73_615392 [Zea mays]
Length = 426
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 116/163 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF AS Y+TF +NP+ FE++ +GTSGQ
Sbjct: 256 ASLPVDMMPGCHDPANFSLPQQPLHRCLFSGASTYNTFSSCSNPHQFELDSVQFLGTSGQ 315
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 316 NIDDLYKYSDAKDKLEFMERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 375
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ +E ++ + VRLIS+P F S +LNL LEC +L
Sbjct: 376 DKYETRLLEGQEKQKVRLISIPRFSESGVAVMLNLRNLECSTL 418
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE R+
Sbjct: 56 LGLEEGKDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDESGRV 115
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN-NENKYV 153
L G I VTGVVVA+ G G F V DV A P++ LS+ E+KYV
Sbjct: 116 TLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQSALSSAEEDKYV 169
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
++ESCP VYF GNQ K+ET+ +E ++ + V ++ + +E+
Sbjct: 361 FLVESCPHVYFVGNQDKYETRLLEGQEKQKVRLISIPRFSES 402
>gi|432874732|ref|XP_004072565.1| PREDICTED: DNA polymerase delta subunit 2-like [Oryzias latipes]
Length = 471
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 118/160 (73%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N TLPQQPLHPC+FP +S Y+T V+NP+ ++G +GTSGQ
Sbjct: 290 ASVPVDVMPGQYDPTNYTLPQQPLHPCMFPLSSAYNTLQLVSNPFEASIDGVRFLGTSGQ 349
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI ++S++ + L+ILE TL+ H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 350 NVCDIQRYSSMDSHLEILEETLQLRHLAPTAPDTLGCYPFYQKDPFILEECPHVYFSGNA 409
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
FE+K I+ + V L+++P+F S++T ++NL TL+C
Sbjct: 410 PTFESKLIKGPDGQEVLLVTIPEFSSTQTACLVNLRTLQC 449
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G +V + KL DL E+C I+GTLFK +L+P+ILKEISEE L+PQP ++S++D
Sbjct: 76 GSNVLIKKLCDLEPG--EQCCIVGTLFKRMELQPSILKEISEEHNLLPQPARAKYISEAD 133
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPRTTLS 146
ELILEDELQRI L G D VTG VVAI G +GKF V D C A P+ PR LS
Sbjct: 134 ELILEDELQRIKLEGKFDKDKCVTGSVVAIYGAEKNDGKFTVEDFCMADLPLQTPRPALS 193
Query: 147 NNE 149
++
Sbjct: 194 SDR 196
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E CP VYF+GN FE+K I+ G+ V ++ + + + T T V + TL
Sbjct: 396 ILEECPHVYFSGNAPTFESKLIKGPDGQEVLLVTIPEFSSTQTACLVNLRTL 447
>gi|293335627|ref|NP_001168398.1| uncharacterized protein LOC100382167 [Zea mays]
gi|223948007|gb|ACN28087.1| unknown [Zea mays]
gi|414864557|tpg|DAA43114.1| TPA: hypothetical protein ZEAMMB73_615392 [Zea mays]
Length = 435
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 116/163 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF AS Y+TF +NP+ FE++ +GTSGQ
Sbjct: 265 ASLPVDMMPGCHDPANFSLPQQPLHRCLFSGASTYNTFSSCSNPHQFELDSVQFLGTSGQ 324
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 325 NIDDLYKYSDAKDKLEFMERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 384
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ +E ++ + VRLIS+P F S +LNL LEC +L
Sbjct: 385 DKYETRLLEGQEKQKVRLISIPRFSESGVAVMLNLRNLECSTL 427
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE R+
Sbjct: 65 LGLEEGKDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDESGRV 124
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN-NENKYV 153
L G I VTGVVVA+ G G F V DV A P++ LS+ E+KYV
Sbjct: 125 TLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQSALSSAEEDKYV 178
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
++ESCP VYF GNQ K+ET+ +E ++ + V ++ + +E+
Sbjct: 370 FLVESCPHVYFVGNQDKYETRLLEGQEKQKVRLISIPRFSES 411
>gi|194747040|ref|XP_001955962.1| GF24834 [Drosophila ananassae]
gi|190623244|gb|EDV38768.1| GF24834 [Drosophila ananassae]
Length = 432
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 114/162 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD++PG +DPAN LPQQP H C+FPEA+K S+F VTNPY ++ L++GT+GQ
Sbjct: 264 SLPVDILPGAYDPANFMLPQQPFHKCMFPEAAKLSSFQAVTNPYSCRLDETLVLGTAGQN 323
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++LS+ L+ L TL+ GHVAPTAPDTLACYP+ D+DP I+ CP VYF GN
Sbjct: 324 VSDLLRSTSLSSALEALRCTLKWGHVAPTAPDTLACYPYIDSDPFILRECPHVYFAGNCD 383
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
FET E + RL+ VP F +++VA+++L TL C +
Sbjct: 384 SFETDLHESSSGQRTRLVCVPSFSRTQSVAVVDLETLACRQV 425
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G+ + KL +L C++IGT++KHQ KP+IL++ISEE +L PQP ++ D
Sbjct: 51 GRQEPIKKLCELRGEQDVHCILIGTIYKHQAHKPSILRDISEENQLAPQPPRQNYSEPED 110
Query: 88 ELILEDELQRIPLHGNIDIHNQV--TGVVVAIKGTPVGNGKFKVSDVCY 134
+++LEDELQR+ L G + + +Q+ TGVV A+ G G F V D+ Y
Sbjct: 111 KVVLEDELQRVRLQGEL-LQSQLMATGVVCAVLGGTDSEGFFNVEDMLY 158
>gi|321479225|gb|EFX90181.1| hypothetical protein DAPPUDRAFT_299981 [Daphnia pulex]
Length = 444
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 112/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SSI VD+MPG DPAN LPQQPLH CL P++ + STFH V+NPY + G+++MG SGQ
Sbjct: 270 SSITVDVMPGAHDPANFVLPQQPLHHCLLPQSYQLSTFHTVSNPYNCRIGGRIVMGNSGQ 329
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
PV DI S+L +PLD +E TL H+ PTAPDTL CYP+ D+DP I +CPD+YF GNQ
Sbjct: 330 PVLDILMNSSLEHPLDAMEKTLEWRHMCPTAPDTLGCYPYDDDDPFIFNTCPDIYFAGNQ 389
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
F + + VRLIS+P F S T+ I++ +TLEC +L
Sbjct: 390 ESFGDRLWQSADGHPVRLISLPRFSESGTIVIVDANTLECFTL 432
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Query: 16 SKFET---KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELK 72
+KF T + +E + GK + KL DL E+ + GT++K Q+LKP+IL+E+S+E +
Sbjct: 40 TKFRTLLEERVEKKWGKQYPIKKLVDL--VPNEKVFVFGTIYKQQELKPSILREVSDEHQ 97
Query: 73 LVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
++P P +VS +D LILEDELQRI L GN ++ VTGVV+A+ G +GKF V D+
Sbjct: 98 VLPLPPKARYVSGTDILILEDELQRILLVGNTNVGEFVTGVVIALLGHEDDSGKFIVEDI 157
Query: 133 CYA 135
C A
Sbjct: 158 CPA 160
>gi|148906690|gb|ABR16494.1| unknown [Picea sitchensis]
gi|148907279|gb|ABR16778.1| unknown [Picea sitchensis]
Length = 446
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 114/165 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DPAN +LPQQPLH CLF AS Y+TF TNP+ F+++G +GTSGQ
Sbjct: 275 AAMPVDIMPGPNDPANFSLPQQPLHKCLFSGASAYNTFVSATNPHQFDLDGVCFLGTSGQ 334
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ LD +E TL+ H+APTAPDTL CYPF D DP +IE CP VYF GNQ
Sbjct: 335 NIDDLGKYSDAKEKLDYMERTLKWRHLAPTAPDTLGCYPFTDRDPFVIEDCPHVYFCGNQ 394
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
K+ ++ +E + + VRL+ +P F + + ++N+ LECH L +
Sbjct: 395 KKYASRLLEGSEGQVVRLVCIPSFCETGSAVVVNIRNLECHLLTL 439
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L D +EC+I+GT++K QLKP++L E S+E + P Q +F+ D LILED+ R+
Sbjct: 71 LGLEDGKECIIVGTVYKQMQLKPSVLDEYSKERSVTPIAQPHNFMHPDDYLILEDDSGRV 130
Query: 99 PLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT--PVFNPRTTLSNNENKYV 153
L GN+ VTGVV A+ G +G F V + A P + S +NKY+
Sbjct: 131 KLTGNVLSPSMYVTGVVAALHGKEGSDGDFYVQSILEAGLPPQHPLHSGYSLKDNKYI 188
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+IE CP VYF GNQ K+ ++ +E +G+ V ++ + ET + V I L H
Sbjct: 381 VIEDCPHVYFCGNQKKYASRLLEGSEGQVVRLVCIPSFCETGSAVVVNIRNLECH 435
>gi|242037091|ref|XP_002465940.1| hypothetical protein SORBIDRAFT_01g048590 [Sorghum bicolor]
gi|241919794|gb|EER92938.1| hypothetical protein SORBIDRAFT_01g048590 [Sorghum bicolor]
Length = 435
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 115/163 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF AS Y+TF +NP+ FE++ +GTSGQ
Sbjct: 265 ASLPVDMMPGCHDPANFSLPQQPLHRCLFSGASTYNTFSSCSNPHQFELDSVQFLGTSGQ 324
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 325 NIDDLYKYSDAKDKLEFMERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 384
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ +E + + VRLIS+P F S +LNL LEC +L
Sbjct: 385 DKYETRLLEGPEKQKVRLISIPRFSESGVAVMLNLRNLECSTL 427
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE R+
Sbjct: 65 LGLEEGKDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDESGRV 124
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN-NENKYV 153
L G I VTGVVVA+ G G F V DV A P+T LS+ E+KYV
Sbjct: 125 TLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQTALSSAAEDKYV 178
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
++ESCP VYF GNQ K+ET+ +E + + V ++ + +E+
Sbjct: 370 FLVESCPHVYFVGNQDKYETRLLEGPEKQKVRLISIPRFSES 411
>gi|224091621|ref|XP_002309305.1| predicted protein [Populus trichocarpa]
gi|222855281|gb|EEE92828.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 112/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ CLFP + Y+TF+ TNP+ FE++G +GTSGQ
Sbjct: 272 AGVSVDIMPGSNDPANFALPQQPLNRCLFPGSRAYNTFNLCTNPHCFELDGVRFLGTSGQ 331
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + L+ +E TL+ H+APTAP+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 332 NIDDLKKYSEARDELEFMERTLKWRHLAPTAPNTLGCYPFTDKDPFLIESCPHVYFVGNQ 391
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ T + + + VRLISVP F + +LNL LECH+L
Sbjct: 392 DKYGTHILNGSEGQLVRLISVPKFCDTGIAVVLNLRNLECHTL 434
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +EC+I+GTL+KH +LKP +L E S+E VP + +F+ D L+LEDE R+
Sbjct: 70 LGLEEGKECIIVGTLYKHMKLKPCVLDEYSKERSAVPLVKPHNFMHPDDHLVLEDESGRV 129
Query: 99 PLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA--TPVFNPRTTLSNNENKY 152
L G + VTG VVA+ G G F V DV A P P+ L + E+KY
Sbjct: 130 KLGGTVLSPSKYVTGGVVALHGKETTAGDFLVLDVFEAGLAPQIEPQ--LKSREDKY 184
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+IESCP VYF GNQ K+ T + +G+ V ++ + +T
Sbjct: 377 FLIESCPHVYFVGNQDKYGTHILNGSEGQLVRLISVPKFCDT 418
>gi|356504864|ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 112/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + +D+MPG DPAN +LPQQ LH CLFP +S Y+TF TNP+ FE++ +GTSGQ
Sbjct: 263 AGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSAYNTFRSCTNPHCFEVDNVRFLGTSGQ 322
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+ +E TLR H+APTAP+TL CYP+ D DP IESCP VYF GNQ
Sbjct: 323 NVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFVGNQ 382
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
KFET+ I+ + + VRLI VP F + +LNL L+CH+L
Sbjct: 383 DKFETRVIKGSEGQLVRLICVPKFSETGVAVMLNLRDLDCHAL 425
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +ECVI+GTL+KH +LKP IL E S+E +VP + +F+ D L+LEDE R+
Sbjct: 61 LGLEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRV 120
Query: 99 PLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKY 152
L G+I + ++ VTG+VVA+ G G G F V DV A L E+KY
Sbjct: 121 KLSGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKPREDKY 175
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
IESCP VYF GNQ KFET+ I+ +G+ V ++ + +ET
Sbjct: 368 FFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLICVPKFSET 409
>gi|47086937|ref|NP_998468.1| DNA polymerase delta subunit 2 [Danio rerio]
gi|16501182|emb|CAD10079.1| novel protein similar to human DNA directed polymerase delta 2,
regulatory subunit (50kD) (POLD2) [Danio rerio]
gi|42744580|gb|AAH66617.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
gi|213624856|gb|AAI71676.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
gi|213625950|gb|AAI71678.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
Length = 467
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 119/171 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N TLPQQPLH C+FP + + T V NPY ++G +GT+GQ
Sbjct: 286 ASVSVDVMPGQYDPTNYTLPQQPLHRCMFPLSIPFPTLQLVINPYQAIVDGVRFLGTAGQ 345
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI K+S++ + L+ILE TLR H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 346 NVSDIGKYSSVDDHLEILESTLRLRHLAPTAPDTLGCYPFYQKDPFILEECPHVYFSGNA 405
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
+++K + + ++V L+++P+F S++T ++NL TLEC + + E
Sbjct: 406 PSYQSKRVTGPEGQDVLLVAIPEFSSTQTACLVNLRTLECEPISFSSFSTE 456
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V + KL DL EECVI+GT+FKH +L+P+IL+EISEE L+PQP ++S SD
Sbjct: 72 GTEVPIRKLCDLQMG--EECVIVGTIFKHMELQPSILREISEEHNLLPQPPRAKYISQSD 129
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPRTTLS 146
ELILEDELQRI L GNID VTG V+AIKG +GKF V D C A P PR LS
Sbjct: 130 ELILEDELQRIKLEGNIDAPKFVTGSVIAIKGAEQNDGKFTVEDFCMADVPPQTPRQPLS 189
Query: 147 NNE 149
++
Sbjct: 190 SDR 192
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E CP VYF+GN +++K + +G+ V ++ + + + T T V + TL
Sbjct: 392 ILEECPHVYFSGNAPSYQSKRVTGPEGQDVLLVAIPEFSSTQTACLVNLRTL 443
>gi|218505643|ref|NP_001136183.1| DNA polymerase subunit delta-2 [Salmo salar]
gi|209155382|gb|ACI33923.1| DNA polymerase subunit delta-2 [Salmo salar]
gi|223648556|gb|ACN11036.1| DNA polymerase subunit delta-2 [Salmo salar]
Length = 474
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 115/160 (71%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ VD+MPG++DP N TLPQQPLH C+FP +S Y T +NP+ ++G ++GTSGQ
Sbjct: 293 SSVPVDVMPGQYDPTNYTLPQQPLHHCMFPLSSTYPTLLLASNPHQATLDGVRILGTSGQ 352
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI K+S++ + L+ILE TLR H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 353 NVKDIQKYSSMDSHLEILENTLRLRHLAPTAPDTLGCYPFYLKDPFILEECPHVYFSGNA 412
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
++ K I + + V L+++P+F S++T ++NL TLEC
Sbjct: 413 PSYQAKRITGAEGQEVLLVAIPEFSSTQTACLINLRTLEC 452
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T+ + + G V + KL DL E+C I+GTLFKH +L+P+ILKEISEE L+PQP
Sbjct: 71 TERAQQKWGADVRIRKLCDLQMG--EQCCIVGTLFKHMELQPSILKEISEEHNLLPQPPR 128
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPV 138
T ++SDSDELILEDELQRI L GNID+ VTG V+AI G +GKF V D C A P
Sbjct: 129 TRYISDSDELILEDELQRIKLEGNIDVDKFVTGSVIAIYGAEKNDGKFTVDDFCTADLPP 188
Query: 139 FNPRTTLSNNE 149
PRTTLS++
Sbjct: 189 QTPRTTLSSDR 199
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E CP VYF+GN ++ K I +G+ V ++ + + + T T + + TL
Sbjct: 399 ILEECPHVYFSGNAPSYQAKRITGAEGQEVLLVAIPEFSSTQTACLINLRTL 450
>gi|224139798|ref|XP_002323281.1| predicted protein [Populus trichocarpa]
gi|222867911|gb|EEF05042.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 113/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ LFP + Y+TF TNP+ FE+ G ++GTSGQ
Sbjct: 283 AGVPVDIMPGSNDPANFCLPQQPLNRWLFPGSRAYNTFRSCTNPHCFELAGVRILGTSGQ 342
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + L+ +E TL+ H+APT P+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 343 NIDDLKKYSEGKDELEFMERTLKWRHLAPTTPNTLGCYPFTDRDPFLIESCPHVYFVGNQ 402
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ T+ ++ + + VRLIS+P F ++ V +LNL LECH+L
Sbjct: 403 DKYGTRILKGSEGQLVRLISIPKFCNTGMVVVLNLRNLECHTL 445
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 43 DTEECVIIGTLFKHQQLKPNILKEISEEL--KLVPQPQHTHFVSDSDELILEDELQRIPL 100
+ +EC+I+GTL+KH +LKP IL E S+E +P + +F+ D L+LEDE R+ L
Sbjct: 81 EGKECIIVGTLYKHMKLKPCILDEYSKEACRSALPLVKPHNFMHPDDHLVLEDESGRVKL 140
Query: 101 HGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA--TPVFNPRTTLSNNENKYV 153
G + VTGVVVA+ G G G F V DV A P P+ L + E+KYV
Sbjct: 141 GGTVLSPSVYVTGVVVALHGKETGAGDFMVLDVLEAGLAPQIEPQ--LKSREDKYV 194
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKL 36
+IESCP VYF GNQ K+ T+ ++ +G+ V ++ +
Sbjct: 388 FLIESCPHVYFVGNQDKYGTRILKGSEGQLVRLISI 423
>gi|28279582|gb|AAH45410.1| Pold2 protein [Danio rerio]
gi|182891524|gb|AAI64684.1| Pold2 protein [Danio rerio]
Length = 467
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 120/171 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N TLPQQPLH C+FP + + T V+NPY ++G +GT+GQ
Sbjct: 286 ASVSVDVMPGQYDPTNYTLPQQPLHRCMFPLSIPFPTLQLVSNPYQAIVDGVRFLGTAGQ 345
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSD+ K+S++ + L+ILE TLR H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 346 NVSDMVKYSSVDDHLEILESTLRLRHLAPTAPDTLGCYPFYQKDPFILEECPHVYFSGNA 405
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
+++K + + ++V L+++P+F S++T ++NL TLEC + + E
Sbjct: 406 PLYQSKRVTGPEGQDVLLVAIPEFSSTQTACLVNLRTLECEPISFSSFSTE 456
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V + KL DL EECVI+GT+FKH +L+P+IL+EISEE L+PQP ++S SD
Sbjct: 72 GTEVPIRKLCDLQMG--EECVIVGTIFKHMELQPSILREISEEHNLLPQPPRAKYISQSD 129
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPRTTLS 146
ELILEDELQRI L GNID VTG V+AIKG +GKF V D C A P PR LS
Sbjct: 130 ELILEDELQRIKLEGNIDAPKFVTGSVIAIKGAEQNDGKFTVEDFCMADVPPQTPRQPLS 189
Query: 147 NNE 149
++
Sbjct: 190 SDR 192
>gi|356572096|ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 112/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + +D+MPG DPAN +LPQQ LH CLFP +S Y+TF TNP+ FE++ +GTSGQ
Sbjct: 263 AGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSTYNTFRSCTNPHCFELDNVRFLGTSGQ 322
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+ +E TLR H+APTAP+TL CYP+ D DP IESCP VYF GNQ
Sbjct: 323 NVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFIGNQ 382
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
KFET+ I+ + + VRL+ VP F + +LNL L+C++L
Sbjct: 383 DKFETRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLDCYAL 425
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +ECVI+GTL+KH +LKP IL E S+E +VP + +F+ D L+LEDE R+
Sbjct: 61 LGLEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRV 120
Query: 99 PLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKY 152
L G I ++ VTG+VVA+ G G G F V DV A L + E+KY
Sbjct: 121 KLSGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDKY 175
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
IESCP VYF GNQ KFET+ I+ +G+ V ++ + +ET
Sbjct: 368 FFIESCPHVYFIGNQDKFETRVIKGSEGQLVRLVCVPKFSET 409
>gi|195125359|ref|XP_002007146.1| GI12543 [Drosophila mojavensis]
gi|193918755|gb|EDW17622.1| GI12543 [Drosophila mojavensis]
Length = 432
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 114/162 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+I VD+MPG +DPAN LPQQP H C+FP A++ S+F VTNPYI ++ L++GT+GQ
Sbjct: 264 AIHVDVMPGAYDPANFMLPQQPFHKCMFPLAAQLSSFQSVTNPYICRLDSALVVGTAGQN 323
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
++D+ + + L + L+ L TL+ GHVAPTAPDTLACYP+ +DP I++ CP VYF GN
Sbjct: 324 ITDLLRSTALDSSLEALRCTLKWGHVAPTAPDTLACYPYISSDPFIMKECPHVYFAGNCE 383
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
KFET K RL+ +P F +++VA+++L+TL+C +
Sbjct: 384 KFETDLHVGSGGKRTRLVCLPSFSKTQSVAVIDLATLDCRQI 425
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 26 EKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 85
E G V ++KL +L +C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++
Sbjct: 49 EWGTQVPIMKLCELRGEQNVQCIIIGTIYKHQAHKPSILRDISEENQLAPQPQRQNYSEP 108
Query: 86 SDELILEDELQRIPLHGN--IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D+LILEDELQR+ L G ++ H TG+V A+KG G F V + +
Sbjct: 109 EDKLILEDELQRVRLQGGEFLESHKLATGIVCAVKGDTDSEGFFNVEKILF 159
>gi|195587048|ref|XP_002083277.1| GD13645 [Drosophila simulans]
gi|194195286|gb|EDX08862.1| GD13645 [Drosophila simulans]
Length = 431
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 113/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 263 SLPVDIMPGAYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 322
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + ++ L TL GHVAPTAPDTLACYP+ D+DP I+ CP VY+ GN
Sbjct: 323 VSDLLRSTSLDSAMEALRCTLTWGHVAPTAPDTLACYPYIDSDPFILRECPHVYYAGNCE 382
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E + K RL+ VP F +++VA+++L TL+C
Sbjct: 383 SFATELHEGAEGKRTRLVCVPSFSKTQSVAVVDLDTLDCR 422
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGSKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGELNGQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|218192011|gb|EEC74438.1| hypothetical protein OsI_09828 [Oryza sativa Indica Group]
Length = 429
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 114/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF A+ Y+TF +NP+ FE++ +GTSGQ
Sbjct: 259 ASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQ 318
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 319 NIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 378
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ ++ + + VRLI +P F S +LNL LEC +L
Sbjct: 379 DKYETQLLQGPEKQKVRLICIPRFCDSGVAVMLNLRNLECSTL 421
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 59 LGLEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRV 118
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV
Sbjct: 119 TLAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYV 172
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVL 34
++ESCP VYF GNQ K+ET+ ++ + + V ++
Sbjct: 364 FLVESCPHVYFVGNQDKYETQLLQGPEKQKVRLI 397
>gi|115450481|ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|13431489|sp|Q9LRE5.1|DPOD2_ORYSJ RecName: Full=DNA polymerase delta small subunit
gi|9188572|dbj|BAA99574.1| OsPol delta small subunit [Oryza sativa Japonica Group]
gi|108705983|gb|ABF93778.1| DNA polymerase delta small subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113547312|dbj|BAF10755.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|215695508|dbj|BAG90699.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624129|gb|EEE58261.1| hypothetical protein OsJ_09265 [Oryza sativa Japonica Group]
Length = 429
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 114/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF A+ Y+TF +NP+ FE++ +GTSGQ
Sbjct: 259 ASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQ 318
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 319 NIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 378
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ ++ + + VRLI +P F S +LNL LEC +L
Sbjct: 379 DKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLECSTL 421
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 59 LGLEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRV 118
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV
Sbjct: 119 TLAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYV 172
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIE-IEKGK 29
++ESCP VYF GNQ K+ET+ ++ +EK K
Sbjct: 364 FLVESCPHVYFVGNQDKYETQLLQGLEKQK 393
>gi|195336716|ref|XP_002034979.1| GM14443 [Drosophila sechellia]
gi|194128072|gb|EDW50115.1| GM14443 [Drosophila sechellia]
Length = 418
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 113/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 250 SLPVDIMPGAYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 309
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + ++ L TL GHVAPTAPDTLACYP+ D+DP I+ CP VY+ GN
Sbjct: 310 VSDLLRSTSLHSAMEALRCTLTWGHVAPTAPDTLACYPYIDSDPFILRECPHVYYAGNCE 369
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E + K RL+ VP F +++VA+++L TL+C
Sbjct: 370 SFATELHEGAEGKRTRLVCVPSFSKTQSVAVVDLDTLDCR 409
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGSKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGELNGQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|42569857|ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
Length = 441
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 111/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ CLFP +S Y+TF TNP+ F+++ +GTSGQ
Sbjct: 270 AGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQ 329
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + LD +E TLR H+APTAP+TL CYPF D DP +IE+CP VYF GNQ
Sbjct: 330 NIDDLGKYSEAKSKLDFVERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQ 389
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K++ + I+ + + VRLI +P F + +NL LECH+L
Sbjct: 390 DKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECHTL 432
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K + +EKGK EC+I+GTLFKH +LKP +L E S+E + P +
Sbjct: 66 KVLGLEKGK----------------ECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPH 109
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF 139
+F+ D LILEDE R+ L G+ + VTGVVVA+ G G+F V DV A
Sbjct: 110 NFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPP 169
Query: 140 NPRTTLSNNENKYV 153
+ E+KYV
Sbjct: 170 QIERPIDLQEDKYV 183
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+IE+CP VYF GNQ K++ + I+ +G+ V ++ + ET V + L H
Sbjct: 375 FLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECH 430
>gi|195435810|ref|XP_002065872.1| GK16535 [Drosophila willistoni]
gi|194161957|gb|EDW76858.1| GK16535 [Drosophila willistoni]
Length = 434
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 113/162 (69%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VD+MPG FDPAN LPQQP H C+FP+AS+ ++F V+NPY ++ L++GT+GQ
Sbjct: 266 ALYVDVMPGAFDPANFMLPQQPFHKCMFPQASQLASFQSVSNPYSCRLDDALIVGTAGQN 325
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
++D+ + + L + LD L TL GH+APTAPDTLACYP+ D+DP II CP +YF GN
Sbjct: 326 IADLKRSTTLESSLDALRCTLTWGHIAPTAPDTLACYPYIDSDPFIITECPHIYFAGNCD 385
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
FET+ K RL+ VP F S++++A+++L TL+C +
Sbjct: 386 NFETELHVGSNGKRTRLVCVPSFSSTQSIAVVDLDTLDCRQI 427
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L+ C++IGT++KHQ KP+IL++ISEE +L P
Sbjct: 40 TRLLTPLAQKKWGTKEPIKKLCELHAEQDIHCILIGTIYKHQVHKPSILRDISEENQLAP 99
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D++ILEDELQR+ L G ++ TG+V AI G P +G F V DV Y
Sbjct: 100 QPPRQNYSEPEDKVILEDELQRVRLRGEHLTGQLMATGIVCAIIGVPDNDGFFNVEDVLY 159
>gi|2673906|gb|AAB88640.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana]
Length = 456
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 111/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ CLFP +S Y+TF TNP+ F+++ +GTSGQ
Sbjct: 285 AGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQ 344
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + LD +E TLR H+APTAP+TL CYPF D DP +IE+CP VYF GNQ
Sbjct: 345 NIDDLGKYSEAKSKLDFVERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQ 404
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K++ + I+ + + VRLI +P F + +NL LECH+L
Sbjct: 405 DKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECHTL 447
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K + +EKGK EC+I+GTLFKH +LKP +L E S+E + P +
Sbjct: 76 KVLGLEKGK----------------ECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPH 119
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF 139
+F+ D LILEDE R+ L G+ + VTGVVVA+ G G+F V DV A
Sbjct: 120 NFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPP 179
Query: 140 NPRTTLSNNENKYV 153
+ E+KYV
Sbjct: 180 QIERPIDLQEDKYV 193
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+IE+CP VYF GNQ K++ + I+ +G+ V ++ + ET V + L H
Sbjct: 390 FLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECH 445
>gi|42571181|ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit
gi|22531160|gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana]
gi|31376377|gb|AAP49515.1| At2g42120 [Arabidopsis thaliana]
gi|62320658|dbj|BAD95325.1| DNA polymerase delta small subunit like protein [Arabidopsis
thaliana]
gi|330254978|gb|AEC10072.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
Length = 440
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 111/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ CLFP +S Y+TF TNP+ F+++ +GTSGQ
Sbjct: 269 AGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + LD +E TLR H+APTAP+TL CYPF D DP +IE+CP VYF GNQ
Sbjct: 329 NIDDLGKYSEAKSKLDFVERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K++ + I+ + + VRLI +P F + +NL LECH+L
Sbjct: 389 DKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECHTL 431
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K + +EKGK EC+I+GTLFKH +LKP +L E S+E + P +
Sbjct: 65 KVLGLEKGK----------------ECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPH 108
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF 139
+F+ D LILEDE R+ L G+ + VTGVVVA+ G G+F V DV A
Sbjct: 109 NFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPP 168
Query: 140 NPRTTLSNNENKYV 153
+ E+KYV
Sbjct: 169 QIERPIDLQEDKYV 182
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+IE+CP VYF GNQ K++ + I+ +G+ V ++ + ET V + L H
Sbjct: 374 FLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVAVNLRNLECH 429
>gi|21064173|gb|AAM29316.1| AT27586p [Drosophila melanogaster]
Length = 431
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 112/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 263 SLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 322
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + L+ L TL GHVAPTAPDTLACYP+ D+DP I+ CP VY+ GN
Sbjct: 323 VSDLLRSTSLDSALEALRCTLTWGHVAPTAPDTLACYPYIDSDPFILRECPHVYYAGNCE 382
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E K RL+ VP F +++VA+++L TL+C
Sbjct: 383 SFATELHEGSDGKRTRLVCVPSFSKTQSVAVVDLDTLDCR 422
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|348516100|ref|XP_003445577.1| PREDICTED: DNA polymerase delta subunit 2 [Oreochromis niloticus]
Length = 471
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 112/160 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N TLPQQPLH C+FP +S Y T +NPY ++G +GTSGQ
Sbjct: 290 ASVPVDVMPGQYDPTNYTLPQQPLHRCMFPLSSVYPTLQLASNPYHASIDGVRFLGTSGQ 349
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI ++S+ + L+ILE TLR H+APTAPDTL CYPFY DP I+E CP VYF+GN
Sbjct: 350 NVCDIQRYSSRDSHLEILEETLRLRHLAPTAPDTLGCYPFYQKDPFILEECPHVYFSGNA 409
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
F++K I+ + V L++VP+F S++ ++NL TL C
Sbjct: 410 PTFDSKLIKGPDGQEVLLVTVPEFSSTQIACLVNLRTLHC 449
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V + KL DL E+C I+GTLFK L+P+ILKEISEE L+PQP ++ +SD
Sbjct: 76 GSDVVIKKLCDLETA--EQCCIVGTLFKRMDLQPSILKEISEEHNLLPQPARAKYIHESD 133
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
ELILEDELQRI L G ID VTG V+A+ G +GKF V D C A
Sbjct: 134 ELILEDELQRIKLEGKIDKDKCVTGSVIAVYGAERNDGKFTVEDFCTA 181
>gi|302779876|ref|XP_002971713.1| hypothetical protein SELMODRAFT_441552 [Selaginella moellendorffii]
gi|300160845|gb|EFJ27462.1| hypothetical protein SELMODRAFT_441552 [Selaginella moellendorffii]
Length = 427
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 112/161 (69%), Gaps = 1/161 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DPAN TLPQQ LH CLFP AS Y TF P TNP+ FE++G +GTSGQ
Sbjct: 256 AAMPVDIMPGANDPANFTLPQQSLHKCLFPGASAYCTFLPATNPHRFELDGIEFLGTSGQ 315
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+++E +LR H+APTAPDTL CYP+ D DP +++ CP VYF GNQ
Sbjct: 316 NVDDLDKYSQAKDVLELMERSLRWRHIAPTAPDTLGCYPYTDKDPFVLDKCPHVYFCGNQ 375
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
++ + +E K+VR IS+P F S T ++NL TL+ H
Sbjct: 376 RSCMSRLLTVEG-KSVRAISIPRFCDSGTAVLVNLRTLDYH 415
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L D + CV+IGT++K +LKP+IL E ++E +P ++F+ D L+LEDE R+
Sbjct: 67 LGLEDGKRCVVIGTIYKQMKLKPSILDEYAKERSKLPLATASNFMHPDDYLVLEDESGRV 126
Query: 99 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 132
L G++ + N VTG+V+A G +G F V ++
Sbjct: 127 KLVGSVVVPSNYVTGIVIAACGAAGKDGDFFVQEI 161
>gi|28317170|gb|AAD46843.2|AF160903_1 HL03874p, partial [Drosophila melanogaster]
Length = 398
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 113/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 230 SLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 289
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + L+ L TL GHVAPTAPDTLACYP+ ++DP I+ CP VY+ GN
Sbjct: 290 VSDLLRSTSLDSALEALRCTLTWGHVAPTAPDTLACYPYIESDPFILRECPHVYYAGNCE 349
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E + K RL+ VP F +++VA+++L TL+C
Sbjct: 350 SFATELHEGSEGKRTRLVCVPSFSKTQSVAVVDLDTLDCR 389
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 6 TRLLTPLAQKKWGNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 65
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V D+ +
Sbjct: 66 QPPRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFFNVEDILF 124
>gi|21358653|ref|NP_647659.1| CG12018 [Drosophila melanogaster]
gi|13431497|sp|Q9W088.1|DPOD2_DROME RecName: Full=DNA polymerase delta small subunit
gi|7292154|gb|AAF47566.1| CG12018 [Drosophila melanogaster]
Length = 431
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 113/160 (70%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD+MPG +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ
Sbjct: 263 SLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQN 322
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
VSD+ + ++L + L+ L TL GHVAPTAPDTLACYP+ ++DP I+ CP VY+ GN
Sbjct: 323 VSDLLRSTSLDSALEALRCTLTWGHVAPTAPDTLACYPYIESDPFILRECPHVYYAGNCE 382
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F T+ E + K RL+ VP F +++VA+++L TL+C
Sbjct: 383 SFATELHEGSEGKRTRLVCVPSFSKTQSVAVVDLDTLDCR 422
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|156375394|ref|XP_001630066.1| predicted protein [Nematostella vectensis]
gi|156217079|gb|EDO38003.1| predicted protein [Nematostella vectensis]
Length = 514
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 114/189 (60%), Gaps = 24/189 (12%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S + VD+MPGEFDP N LPQQPLH C+FPEA Y T VTNPY + G ++GTSGQ
Sbjct: 303 SCVAVDVMPGEFDPTNHALPQQPLHRCMFPEAIAYPTMQSVTNPYEAVIGGIRVLGTSGQ 362
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI+K + N +DILE + C H+APTAPDTL CYP+ D DP I+E CP VYF NQ
Sbjct: 363 NVSDISKVTTFDNSMDILEQNMVCSHLAPTAPDTLDCYPYADQDPFILEKCPHVYFASNQ 422
Query: 276 SKFETKTI--------EI----------------EKDKNVRLISVPDFFSSRTVAILNLS 311
+++K + EI + + V L++VP F +S+T A++NL
Sbjct: 423 PSYQSKVLTGKASYQHEILTGEIPESNQPKILTGDNKQRVLLVAVPAFATSKTCALINLR 482
Query: 312 TLECHSLVV 320
TL C L V
Sbjct: 483 TLTCQPLKV 491
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G S+ + KL++L E+C IIGTLFK +LKP +LKE+S E L+ QP ++VSD D
Sbjct: 85 GNSLPIKKLTELKLD--EKCCIIGTLFKKMELKPCVLKEMSAEQNLLLQPSRANYVSDDD 142
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
++LEDE +R+ L GNI++ + ++G ++A+ G +GKF V D C
Sbjct: 143 FMVLEDESERVVLTGNIEVGSSISGTIMALSGRTSDDGKFVVEDSC 188
>gi|297827879|ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
lyrata]
gi|297327661|gb|EFH58081.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 111/163 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQPL+ CLFP +S Y+TF TNP+ F+++ +GTSGQ
Sbjct: 270 AGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDLDNIRFLGTSGQ 329
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + LD +E TLR H+APTAP+TL CYPF D DP +IE+CP VYF GNQ
Sbjct: 330 NIDDLDKYSEAKSKLDFVERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQ 389
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K++ + ++ + + VRLI +P F + +NL L+CH+L
Sbjct: 390 EKYDNRLLKGSEGQLVRLICIPKFCETGIAVAVNLRNLDCHTL 432
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 17/116 (14%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K + +EKGK ECVI+GTLFKH +LKP +L E S+E + P +
Sbjct: 66 KVLGLEKGK----------------ECVIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPH 109
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+F+ D LILEDE R+ L G+ + VTGVVVA+ G G+F V DV A
Sbjct: 110 NFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEA 165
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+IE+CP VYF GNQ K++ + ++ +G+ V ++ + ET V + L H
Sbjct: 375 FLIETCPHVYFVGNQEKYDNRLLKGSEGQLVRLICIPKFCETGIAVAVNLRNLDCH 430
>gi|449684196|ref|XP_004210569.1| PREDICTED: DNA polymerase delta subunit 2-like [Hydra
magnipapillata]
Length = 177
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 112/165 (67%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+I VD+MPGEFDP N LPQQPLH C+FP++ +ST VTNPY + G ++GTSGQ
Sbjct: 5 STIPVDVMPGEFDPTNQFLPQQPLHKCMFPKSYGHSTVQSVTNPYQLMIGGLRVLGTSGQ 64
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ +I ++S N LDILE TL GH++PT+PDTL+CYPFY DP II+ CP +YF GNQ
Sbjct: 65 NIDNIYQYSCFDNRLDILESTLLRGHISPTSPDTLSCYPFYTEDPFIIDHCPHIYFVGNQ 124
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
KFET+ IE + V L+ VP + T+ ++NL L C L +
Sbjct: 125 PKFETRLIEGNDKQKVLLVCVPPLEKTFTLVMVNLQNLTCFPLTL 169
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II+ CP +YF GNQ KFET+ IE + V ++ + L +T T
Sbjct: 110 FIIDHCPHIYFVGNQPKFETRLIEGNDKQKVLLVCVPPLEKTFT 153
>gi|195490562|ref|XP_002093191.1| GE21185 [Drosophila yakuba]
gi|194179292|gb|EDW92903.1| GE21185 [Drosophila yakuba]
Length = 431
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 109/157 (69%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
VD+M G +DPAN LPQQP H C+FP+A++ +TF VTNPY ++ L++GTSGQ VSD
Sbjct: 266 VDIMAGAYDPANFMLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQNVSD 325
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
+ + + L + LD L TL GH+AP+APDTLACYP+ D+DP I+ CP VY+ GN F
Sbjct: 326 LLRSTALDSALDALRCTLTWGHIAPSAPDTLACYPYIDSDPFILRECPHVYYAGNCESFA 385
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
T+ E + K RL+ VP F +++VA+++L TL+C
Sbjct: 386 TELHEGAEGKRTRLVCVPKFSKTQSVAVVDLDTLDCR 422
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T ++ + G + KL +L C++IGT+FKHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLVQKKWGNKEPIKKLCELRGEQDIHCILIGTIFKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D+++LEDELQR+ L G I+ TGVV A G +G F V D+ +
Sbjct: 99 QPPRQNYSDPEDKIVLEDELQRVRLQGEINGQFLATGVVCAALGGTDSDGFFNVEDMLF 157
>gi|303282229|ref|XP_003060406.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457877|gb|EEH55175.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 466
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 117/182 (64%), Gaps = 12/182 (6%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ VD+MPGE DP N LPQQPLHPCLFP A++Y TF TNP+ F++ G +GTSGQ
Sbjct: 287 SSVHVDVMPGEGDPTNQALPQQPLHPCLFPSAARYDTFAASTNPHEFDVGGVGFLGTSGQ 346
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+SD+ K++N LD++E +LR H+AP+APDTLACYP+ D DP +++CPDVYF G Q
Sbjct: 347 NISDLCKYTN--ERLDLMESSLRWQHLAPSAPDTLACYPYKDRDPFHLDACPDVYFAGCQ 404
Query: 276 SKFETKTIEIEKDK----------NVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTE 325
F ++ +E+E+ +SVP F ++ T+ +++L TL C + D
Sbjct: 405 PAFGSRVVELERRGAGAGAGGETTRTLAVSVPSFAATGTIVMVDLETLTCTPVTFGDGGA 464
Query: 326 ER 327
R
Sbjct: 465 AR 466
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 35 KLSDLNETDTEECVIIGTLFKHQQLKPNILKE------ISEELKLVPQPQHTHFVSDSDE 88
K+ DL E EECV+ GTL+K +LKP IL E +S + + T FV + D
Sbjct: 69 KVLDLKEG--EECVLSGTLYKDMKLKPCILDEYVKEAGVSASAVAIEDSKKTKFVGEDDS 126
Query: 89 LILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
++LEDE R+ L G ID++ VTGVV+A +G V G+F+ ++C+
Sbjct: 127 IVLEDEGARVKLTGAAIDVNALVTGVVLAARGRVVPGGEFEADEICF 173
>gi|357114246|ref|XP_003558911.1| PREDICTED: DNA polymerase delta small subunit-like [Brachypodium
distachyon]
Length = 429
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 113/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF AS Y+TF NP+ F+++ +GTSGQ
Sbjct: 259 ASLPVDIMPGCNDPANFSLPQQPLHRCLFAGASTYNTFSSCPNPHQFDLDNVKFIGTSGQ 318
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ ++S+ + L+ +E TL H+APTAP++L CYP+ D DP +IESCP VYF GNQ
Sbjct: 319 NIDDLYRYSDAKDRLEFMERTLTWRHLAPTAPNSLGCYPYTDKDPFLIESCPHVYFVGNQ 378
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
++ET+ ++ + + VRLIS+P F S +LNL LEC +L
Sbjct: 379 DRYETRLLQGSEKQQVRLISIPRFSDSGIAVMLNLRNLECSTL 421
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++CV++GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 59 LGLEEGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDNLILEDESGRV 118
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
L G I VTGVVVA+ G G F V DV A P+T L S NE+KYV
Sbjct: 119 ALAGAISPAAYVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQTALPSINEDKYV 172
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 1 MIIESCPDVYFTGNQSKFETKTI---EIEKGKSVSVLKLSD 38
+IESCP VYF GNQ ++ET+ + E ++ + +S+ + SD
Sbjct: 364 FLIESCPHVYFVGNQDRYETRLLQGSEKQQVRLISIPRFSD 404
>gi|326504838|dbj|BAK06710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 114/163 (69%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF AS Y+TF NP+ F+++ +GTSGQ
Sbjct: 255 ASLPVDIMPGCNDPANFSLPQQPLHRCLFSGASTYNTFSSCPNPHQFDLDNVKCIGTSGQ 314
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ ++S+ + L+ +E TL+ H+APTAP++L CYP+ D DP ++E+CP VYF GNQ
Sbjct: 315 NIHDLYRYSDAKDRLEFMERTLKWRHLAPTAPNSLGCYPYTDKDPFLVETCPHVYFAGNQ 374
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K+ET+ ++ + + VRLIS+P F S +LNL LEC +L
Sbjct: 375 DKYETRLLKGTEKQQVRLISIPRFCESGIAVMLNLRNLECSTL 417
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
++CV++GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+ L G I
Sbjct: 61 KDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVALAGAI 120
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
VTGVVVA+ G G F V DV A P++ L NE+KYV
Sbjct: 121 PPAAYVTGVVVALHGKETSAGNFLVEDVMEAG--LPPQSVLPCINEDKYV 168
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
++E+CP VYF GNQ K+ET+ ++ + + V ++ + E+
Sbjct: 360 FLVETCPHVYFAGNQDKYETRLLKGTEKQQVRLISIPRFCES 401
>gi|195403405|ref|XP_002060280.1| GJ16059 [Drosophila virilis]
gi|194140619|gb|EDW57093.1| GJ16059 [Drosophila virilis]
Length = 432
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 114/169 (67%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VD+MPG +DPAN LPQQP H C+FP AS+ S+F V+NPY ++ L++GT+GQ
Sbjct: 264 ALTVDVMPGAYDPANFMLPQQPFHKCMFPLASQLSSFQSVSNPYACRLDSALVVGTAGQN 323
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V+D+ + ++L + L L TL GHVAPTAPDTLACYP+ +DP I++ CP VYF GN
Sbjct: 324 VADLLRSTSLDSSLQALRCTLTWGHVAPTAPDTLACYPYISSDPFIMKECPHVYFAGNCE 383
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTE 325
FET+ K RL+ VP F +++VA+++L +L+C + ++E
Sbjct: 384 SFETELHVGTGGKKTRLVCVPSFCKTQSVALIDLESLDCRQIKFSAVSE 432
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 24 EIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 83
+ + GK V ++KL +L +C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++
Sbjct: 47 QTKWGKEVPIMKLCELRGEQNVQCIIIGTVYKHQAHKPSILRDISEENQLAPQPQRQNYS 106
Query: 84 SDSDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D+++LEDELQR+ L G +++ N TG+V A+KG +G F V +V +
Sbjct: 107 EPEDKVMLEDELQRVRLQGEHLEARNLATGIVCAVKGGTDNDGYFNVEEVLF 158
>gi|168040943|ref|XP_001772952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675685|gb|EDQ62177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DPAN +LPQQPLH CLFP A+ Y+TF TNP+ FE++ L +GTSGQ
Sbjct: 269 AAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMYNTFVSATNPHQFELDDVLFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D++K+S + LD +E TL H+APTAPDTL CYPF D DP I+E+CP VYF GNQ
Sbjct: 329 NIDDLSKYSEAEDRLDFMERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
+ ++ + + VRL+ +P+F + T A+LN+ + C
Sbjct: 389 PHYASRLLTGPSAQKVRLVCIPEFHKTST-AVLNVIKIRC 427
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 26 EKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 85
E+ S+ V + L E + CV+IGTL+K QLKP++L E S+E +VP F
Sbjct: 57 ERWPSLPVCNILALEED--KACVVIGTLYKQMQLKPSVLDEYSKERSVVPLASPNKFTHK 114
Query: 86 SDELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTT 144
D LILEDE R+ L G+ + + VTGVVVAI G +G+F V DV A P+
Sbjct: 115 DDYLILEDESGRVKLTGSAVLSSMYVTGVVVAIVGREEKDGEFFVEDVMVAG--LPPQKP 172
Query: 145 LSNNE-NKYV 153
L N++ +K+V
Sbjct: 173 LKNSDVDKFV 182
>gi|125976758|ref|XP_001352412.1| GA11341 [Drosophila pseudoobscura pseudoobscura]
gi|54641158|gb|EAL29908.1| GA11341 [Drosophila pseudoobscura pseudoobscura]
Length = 431
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 110/159 (69%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+D+MPG +DPAN LPQQP H C+FP+A++ ++F VTNPY ++ L++GT+GQ V+D
Sbjct: 266 IDVMPGAYDPANFMLPQQPFHKCMFPQAAQLTSFQAVTNPYNCRLDDALIVGTAGQNVAD 325
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
+ + +++ + L+ L TL GHVAPTAPDTLACYP+ +NDP I+ CP VYF GN FE
Sbjct: 326 LLRSTSMESSLEALRCTLTWGHVAPTAPDTLACYPYIENDPFIMRECPHVYFAGNCEAFE 385
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
T + K L+ VP+F +++VA+++L TL C +
Sbjct: 386 TALHVTSEGKRTCLVCVPNFGKTKSVAVVDLDTLSCRQI 424
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + GK+ + KL +L C++IGT++KHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGKTEPIKKLCELRGEQDVHCILIGTIYKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D++ILEDELQR+ L G + TG+V A+ G G F V DV Y
Sbjct: 99 QPPRQNYSEPEDKVILEDELQRVRLQGKMLQTQLMATGIVCAVLGGTDNEGFFNVDDVMY 158
Query: 135 ATPVFNPRTTLSNNENK 151
P+ LS N+
Sbjct: 159 YES--GPQKPLSTIRNR 173
>gi|307106804|gb|EFN55049.1| hypothetical protein CHLNCDRAFT_35821 [Chlorella variabilis]
Length = 468
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ + +MPG DPAN TLPQQPLH C+FP A+ YST H TNP+ FE++G +GTSGQ
Sbjct: 298 AAVPLGIMPGAGDPANYTLPQQPLHRCMFPGAAAYSTLHRATNPHEFELDGVTFLGTSGQ 357
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ ++S L + + ILE LR H+APTAPDTLA YP+++NDP I+ S P V F G Q
Sbjct: 358 NVDDVCRYSELEDRVTILEKLLRWRHLAPTAPDTLAAYPYFNNDPFILRSTPHVLFAGGQ 417
Query: 276 SKFETKTIEIEKDKNV-RLISVPDFFSSRTVAILNLSTLECHSLVVEDLTE 325
+F T +E E R+++VP+F ++ V ++NL+TL C + + L +
Sbjct: 418 PQFGTALVEEEAGGAACRVVAVPNFCTTGCVVLVNLATLYCQPIYFDALQD 468
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-I 104
E I GTL+K LKP+IL E ++ + Q F D LILEDE R+ L G+ +
Sbjct: 102 EVAIAGTLYKEMALKPSILDEYVKDRTMSQQLGRARFTQPDDRLILEDEGARLALCGDKL 161
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
+ VTGVV A++G + NG F+ D+CYA P+ L + E+KYV
Sbjct: 162 PVGECVTGVVAAVRGHVLPNGDFEALDLCYAG--LPPQAPLPAVGEDKYV 209
>gi|195170791|ref|XP_002026195.1| GL16053 [Drosophila persimilis]
gi|194111075|gb|EDW33118.1| GL16053 [Drosophila persimilis]
Length = 431
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 109/159 (68%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+D+MPG +DPAN LPQQP H C+FP+A++ ++F VTNPY ++ L++GT+GQ V+D
Sbjct: 266 IDVMPGAYDPANFMLPQQPFHKCMFPQAAQLTSFQAVTNPYNCRLDDALIVGTAGQNVAD 325
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
+ + +++ + L+ L TL GHVAPTAPDTLACYP+ +NDP I+ CP VYF GN FE
Sbjct: 326 LLRSTSMESSLEALRCTLTWGHVAPTAPDTLACYPYIENDPFIMRECPHVYFAGNCEAFE 385
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
T + K L+ VP F +++VA+++L TL C +
Sbjct: 386 TALHVTSEGKRTCLVCVPSFGKTKSVAVVDLDTLSCRQI 424
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
++ T + + GK+ + KL +L C++IGT++KHQ KP+IL++ISEE +L P
Sbjct: 39 TRLLTPLAQKKWGKTEPIKKLCELRGEQDVHCILIGTIYKHQAHKPSILRDISEENQLAP 98
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
QP ++ D++ILEDELQR+ L G + TG+V A+ G G F V DV Y
Sbjct: 99 QPPRQNYSEPEDKVILEDELQRVRLQGKMLQTQLMATGIVCAVLGGTDNEGFFNVDDVMY 158
Query: 135 ATPVFNPRTTLSNNENK 151
P+ LS N+
Sbjct: 159 YES--GPQKPLSTIRNR 173
>gi|440804352|gb|ELR25229.1| DNA polymerase epsilon subunit B protein [Acanthamoeba castellanii
str. Neff]
Length = 482
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN LPQQP +PCLFP AS+Y+TF VTNPY ++G ++G SGQ
Sbjct: 310 ASMHVDIMPGAGDPANFVLPQQPFNPCLFPTASRYATFSSVTNPYQCRVDGLFIVGHSGQ 369
Query: 216 PVSDIAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
PV DI K+ + S + L I+E TL H+APT PDTL YPF DP +++ CP +YF
Sbjct: 370 PVDDIKKYIDPSKTDTLRIMEDTLNWSHLAPTTPDTLGAYPFSGEDPFVLDECPHIYFAA 429
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
NQ+ +++K I K + VRLISVP F + T+ ++NL TL H +
Sbjct: 430 NQATYDSKLITGPKGQVVRLISVPSFTKTSTIVLVNLKTLATHPI 474
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
EE ++ GTL+K L+PNIL+ ++E ++P P +++VS+ D LI+EDE RI L G +
Sbjct: 127 EEVIVAGTLYKEMPLRPNILESYAKERSIIPPPLRSNYVSEKDRLIIEDESGRISLVG-V 185
Query: 105 DIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFNPRTTLSNNENKYV 153
D+ VTG++VAI+G + +G F+V D+ + P+ R L ++KYV
Sbjct: 186 DLPTDLVVTGIIVAIRGVELKDGDFQVDDIIFTGIPMQLKRPIL--EKDKYV 235
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKH 56
+++ CP +YF NQ+ +++K I KG+ V ++ + +T T V + TL H
Sbjct: 418 VLDECPHIYFAANQATYDSKLITGPKGQVVRLISVPSFTKTSTIVLVNLKTLATH 472
>gi|302838033|ref|XP_002950575.1| hypothetical protein VOLCADRAFT_81183 [Volvox carteri f.
nagariensis]
gi|300264124|gb|EFJ48321.1| hypothetical protein VOLCADRAFT_81183 [Volvox carteri f.
nagariensis]
Length = 514
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ + VD+MPG DPAN LPQQP+H CLFP A +F TNP+ FE +G L+G SGQ
Sbjct: 336 AGMSVDVMPGAEDPANVALPQQPMHRCLFPAAGMQGSFVRATNPHEFESDGVRLLGCSGQ 395
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+AK+ + + LDI++ ++ H+APTAPDTL CYPF+D DP I+E+ P VYF GNQ
Sbjct: 396 NVDDMAKYCGIRDRLDIMQRSVESRHIAPTAPDTLTCYPFHDKDPFILETTPHVYFVGNQ 455
Query: 276 SKFETKTIEIEKDKN--------VRLISVPDFFSSRTVAILNLSTLECHSL 318
+F T+ + VRL++VP F + T+ ++NL TL CH L
Sbjct: 456 PEFATRLLGGGSAAGAAAAAGPVVRLVTVPSFVRTGTIVLINLRTLACHPL 506
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 43 DTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG 102
+++E +IGT++K+ +LKP+IL E S++ L +F S D L+LEDE R+ L
Sbjct: 96 ESKEVAVIGTVYKNMKLKPSILDEYSKDRGLKAALGAANFCSGDDSLVLEDEGARMVLRD 155
Query: 103 ------------------NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP 141
+++ VTG+V+A++G G F V+ VC+ NP
Sbjct: 156 VAGPGPAGGSTTSGGGSEPLNVQEIVTGLVLAVRGVHEPGGDFIVNAVCFPGMAPNP 212
>gi|302819832|ref|XP_002991585.1| hypothetical protein SELMODRAFT_429905 [Selaginella moellendorffii]
gi|300140618|gb|EFJ07339.1| hypothetical protein SELMODRAFT_429905 [Selaginella moellendorffii]
Length = 448
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DPAN TLPQQ LH CLFP AS Y TF P TNP+ FE++G +GTSGQ
Sbjct: 261 AAMPVDIMPGANDPANFTLPQQSLHKCLFPGASAYCTFLPATNPHRFELDGIEFLGTSGQ 320
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V D+ K+S + L+++E TLR H+APTAPDTL CYP+ D DP +++ CP VYF GNQ
Sbjct: 321 NVDDLDKYSEAKDVLELMERTLRWRHIAPTAPDTLGCYPYTDKDPFVLDRCPHVYFCGNQ 380
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLS 311
++ + +E K+VR IS+P F S T ++ S
Sbjct: 381 RSCMSRLLTVEG-KSVRAISIPRFCDSGTAVLVTCS 415
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L D + CV+IGT++K +LKP+IL E ++E +P ++F+ D L+LEDE R+
Sbjct: 72 LGLEDGKRCVVIGTIYKQMKLKPSILDEYAKERSKLPLATASNFMHPDDYLVLEDESGRV 131
Query: 99 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 132
L G++ + N VTG+V+A G +G F V ++
Sbjct: 132 KLVGSVVVPSNYVTGIVIAACGAAGKDGDFFVQEI 166
>gi|6063533|dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 110/157 (70%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG DPAN +LPQQPLH CLF A+ Y+TF +NP+ FE++ +GTSGQ
Sbjct: 261 ASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQ 320
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S+ + L+ +E TLR H+APTAP++L CYP+ D DP ++ESCP VYF GNQ
Sbjct: 321 NIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQ 380
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLST 312
K+ET+ ++ + + VRLI +P F S ++N S+
Sbjct: 381 DKYETQLLQGLEKQKVRLICIPRFCDSGVAVMVNTSS 417
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 59 LGLEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRV 118
Query: 99 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV
Sbjct: 119 TLAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYV 172
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIE-IEKGK 29
++ESCP VYF GNQ K+ET+ ++ +EK K
Sbjct: 366 FLVESCPHVYFVGNQDKYETQLLQGLEKQK 395
>gi|167537048|ref|XP_001750194.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771356|gb|EDQ85024.1| predicted protein [Monosiga brevicollis MX1]
Length = 999
Score = 171 bits (432), Expect = 5e-40, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S++ VD+MPG+ DPAN +PQQPLH C+FP A+KY + VTNP F ++G ++GTSGQ
Sbjct: 293 STVPVDMMPGDHDPANKIVPQQPLHKCMFPTATKYGSLRGVTNPTDFVLDGVHILGTSGQ 352
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD--NDPMIIESCPDVYFTG 273
+ D+ +F+ + L++LE LR GH+ PTAPDTL YP+ DP I CP V+F G
Sbjct: 353 NIDDVYRFTESEDRLELLERILRWGHLFPTAPDTLCVYPYTTEHKDPFAIGDCPHVFFAG 412
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
NQ +F TK + VRL+ VPDF + T +L+L TLE L ++ E
Sbjct: 413 NQPEFATKECSGPDGQKVRLVCVPDFSKTATAVLLDLHTLEATPLCFSNMVAE 465
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 47 CVIIGTLFKHQQLKPNILKEI-SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-NI 104
CV++GT++K +LKPNIL E + E P P+ + + +D D +ILED+ R L G +
Sbjct: 97 CVVVGTVYKDMKLKPNILDEFNARENYEAPPPERSKYFADDDVIILEDQTGRTVLSGAGL 156
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ V+GVV+A KG G+F+V++ C+
Sbjct: 157 PVGELVSGVVMAAKGVENDKGEFEVNECCF 186
>gi|345567478|gb|EGX50410.1| hypothetical protein AOL_s00076g174 [Arthrobotrys oligospora ATCC
24927]
Length = 466
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTS 213
+SI V LMPGE DPAN +LPQQ +HP +FP A Y STF P TNP+ E++G +GTS
Sbjct: 292 TSISVTLMPGETDPANASLPQQKMHPTMFPTAKYYTGSTFIPSTNPHACEIDGVRFLGTS 351
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ + D+ K+ + + L+++E TLR VAPTAPDTL CYPF D+D +IE+CP VYF G
Sbjct: 352 GQTIDDVFKYVDGDDRLEMMEKTLRWRLVAPTAPDTLWCYPFQDDDQFVIETCPHVYFIG 411
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
NQS+F T+ ++ VRLI++P F + + +++L TL+C
Sbjct: 412 NQSEFGTRLTHGLNNQEVRLITIPKFSETGELVLVDLETLDC 453
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQR 97
L+ E C I GT++ + LKPN+L +I+++ + P P+ + + D++++EDE R
Sbjct: 72 LDVRQGELCWITGTIYMNMPLKPNVLDDIAKDHFISAPLPRQKYRDFEKDQIMIEDESGR 131
Query: 98 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFNPR 142
+ L G+ I + VTG VV + GT +G+F+V D+ P NPR
Sbjct: 132 LELVGSKIKTEDLVTGCVVGVMGTETASGEFEVIDIVLPELPDQNPR 178
>gi|340385463|ref|XP_003391229.1| PREDICTED: DNA polymerase delta subunit 2-like [Amphimedon
queenslandica]
Length = 506
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 109/163 (66%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ V LMPG +DPAN LPQQPLH C+FP+++KY F VTNPY +EG +GT G+
Sbjct: 306 SSVPVALMPGTYDPANKQLPQQPLHHCMFPKSAKYDNFKSVTNPYSCTIEGHKFIGTCGE 365
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ ++ + + L++LE TL HVAPTAPD L CYPF + DP I++ CP VYF GNQ
Sbjct: 366 NIESMSCCTIGMDSLELLELTLMSSHVAPTAPDILCCYPFSNADPFIMDDCPHVYFAGNQ 425
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
KF++K + + + V LI VP F S+ ++A++NL TL C L
Sbjct: 426 PKFQSKLVTGDDGQKVLLICVPSFNSTHSLALINLRTLACTPL 468
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
T T+ G L DL CV+IGTLFK L+P+ +K+IS+ +L+P P
Sbjct: 66 TATLHYTTGSDTVFRNLKDLEPG--LACVVIGTLFKEMSLRPSTIKQISDNQRLLPYPPK 123
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPV 138
S +D++ LED QR+ L D TG++VA+KG +G F+VSD C P+
Sbjct: 124 GKLSSSTDKIFLEDYSQRVILSNLSDNTALTTGMIVAVKGVQNADGNFEVSDYCLPGMPL 183
Query: 139 FN-PRTTLSNNENKYVNHSSIEVDLMPG 165
N P +L+N ++YV +I LM G
Sbjct: 184 KNDPLPSLNN--DRYV---AIVSGLMVG 206
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I++ CP VYF GNQ KF++K + + G+ V ++ + N T + + + TL
Sbjct: 412 IMDDCPHVYFAGNQPKFQSKLVTGDDGQKVLLICVPSFNSTHSLALINLRTL 463
>gi|255085562|ref|XP_002505212.1| predicted protein [Micromonas sp. RCC299]
gi|226520481|gb|ACO66470.1| predicted protein [Micromonas sp. RCC299]
Length = 455
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 141/286 (49%), Gaps = 36/286 (12%)
Query: 57 QQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVA 116
Q +P+ E S + V D+ L EL + GN+ N+ GV +
Sbjct: 174 QATRPSATDEASSAGRHVLLCSGLRVGDDAASSALNLELMCDYVTGNLGGANE-QGVAAS 232
Query: 117 IKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNH-------------SSIEVDLM 163
I + G DV P +L V +S+ VDLM
Sbjct: 233 IARVVICGGALPEVDV--------PAQSLDGRAQAAVARPLRQLDVLLTTLAASVPVDLM 284
Query: 164 PGEFDPANTTLPQQPLHPCLFPEASKYS--TFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
PG+ DP N LPQQPLHPCLFPEA ++S TF TNP+ F + G +GT+GQ VS++A
Sbjct: 285 PGDGDPTNQALPQQPLHPCLFPEAKRFSPHTFASCTNPHDFTIGGVDFLGTAGQNVSNLA 344
Query: 222 KFSNL-----------SNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
++N+ LD++E T+R HVAP+APDTLACYP+ D DP IE P VY
Sbjct: 345 AYTNVVKGGAGGDDDAGEALDLMEATVRWQHVAPSAPDTLACYPYKDRDPFFIERSPHVY 404
Query: 271 FTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
F G Q F + + + D +SVPDF + V +L++ TLECH
Sbjct: 405 FAGMQPAFGCRKVRV-GDAETVCVSVPDFSKTSAVVLLDVDTLECH 449
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKE-ISEELKLVPQPQHTHFVSD 85
K V +K+ DL E EECV++GTL+K +LKP+IL E + E + FVSD
Sbjct: 61 KWPGVPAVKVLDLKEG--EECVVMGTLYKDMKLKPSILDEYVKEAGAKASEVAAKKFVSD 118
Query: 86 SDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
D L+LEDE R+ L G + + VTGVV+A+KG V NG+F+V ++CY P
Sbjct: 119 DDSLVLEDEGARVRLTGKGVAVDCFVTGVVLAVKGRVVANGEFEVDEICYPAPA 172
>gi|255579737|ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
gi|223529721|gb|EEF31661.1| DNA polymerase delta small subunit, putative [Ricinus communis]
Length = 425
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 108/157 (68%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ +D+MPG DPAN +LPQQPLH CLFP ++ Y+TF TNP+ FE++ +GTSGQ
Sbjct: 269 ASMPMDIMPGSNDPANFSLPQQPLHRCLFPGSAAYNTFRSCTNPHCFELDNIRFLGTSGQ 328
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+S + L+ +E TL+ H+APTAP+TL CYPF D DP +IESCP VYF GNQ
Sbjct: 329 NIDDLEKYSEAKDKLEFMERTLKWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQ 388
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLST 312
K+ T+ ++ + + RLIS+P F + + ++ T
Sbjct: 389 DKYGTRLLKGSEGQLSRLISIPKFCETGVAVVGSILT 425
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L + +EC+I+GTL+KH +LKP IL E S+E +P + +F+ D L+LEDE R+
Sbjct: 67 LGLVEGKECIIVGTLYKHMKLKPCILDEYSKERSAIPLVKPHNFMHLDDHLVLEDESGRV 126
Query: 99 PLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
L G++ + VTG+VVA+ G G G F V DV A L + E+KYV
Sbjct: 127 KLGGDMLTPSAYVTGLVVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDKYV 182
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLF 54
+IESCP VYF GNQ K+ T+ ++ +G+ ++ + ET ++G++
Sbjct: 374 FLIESCPHVYFVGNQDKYGTRLLKGSEGQLSRLISIPKFCETGV---AVVGSIL 424
>gi|430813520|emb|CCJ29133.1| unnamed protein product [Pneumocystis jirovecii]
Length = 439
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGK---LLM 210
++ V LMPGE DP+NT LPQQP+H P A Y ST TNP E++G +
Sbjct: 262 ATTSVILMPGESDPSNTLLPQQPIHFSFIPNAKHYYGSTLKTSTNPMWLEIDGVNFFRFL 321
Query: 211 GTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
G+SGQ ++DI K++N N L I+EYTLR H APTAPDTL CYPF + DP I+ P VY
Sbjct: 322 GSSGQTINDIYKYTNKHNKLSIMEYTLRWQHCAPTAPDTLWCYPFLEKDPFILSETPHVY 381
Query: 271 FTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
F GNQ +F TK IE E + +RLI +P F + T+ +LNLSTLEC
Sbjct: 382 FVGNQEEFNTKFIEGENGQIIRLIMLPVFSKTDTIVLLNLSTLEC 426
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV 74
Q + I+ K K S L L+ E C I+GT++ LKPNIL +I ++ +V
Sbjct: 36 QQNWGDMVIKDWKVKRASRL----LDIVHGEICWIVGTVYVDAPLKPNILDDIKKDYWMV 91
Query: 75 PQPQHTHFVSDSDELILEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVC 133
+ S + +ILEDE RI L G+ + VTG V+ G + NG F+V D+C
Sbjct: 92 GPKNEKYIDSTNSNVILEDEYGRIRLVGSKILQEFLVTGCVIGALGFEIQNGNFEVIDLC 151
Query: 134 YATPVFNPRTTLSNNEN----KYV 153
+ P + +L N N KYV
Sbjct: 152 F--PELPNQISLPNRNNTDTHKYV 173
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+ P VYF GNQ +F TK IE E G+ + ++ L ++TDT + + TL
Sbjct: 372 FILSETPHVYFVGNQEEFNTKFIEGENGQIIRLIMLPVFSKTDTIVLLNLSTL 424
>gi|307192428|gb|EFN75644.1| DNA polymerase delta small subunit [Harpegnathos saltator]
Length = 459
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPG+ DP N LPQ PLH C+ P+ S+Y +F TNP+I ++ +L+MG+SGQP+ D
Sbjct: 294 ITLMPGQHDPTNAMLPQMPLHSCVIPQTSRYRSFKGATNPWIGKVAERLIMGSSGQPIED 353
Query: 220 IAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
IAK + ++ L+ LE TL H+ PTAPDTL +P+++ DP II CPD+YF GN +K
Sbjct: 354 IAKATGATDISSLEWLERTLLWRHMCPTAPDTLPVHPYFERDPFIINHCPDIYFVGNTAK 413
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
FETK + E D+ VRLI +P F S+ T +++ +LE S+
Sbjct: 414 FETKLWKGEGDQIVRLICIPQFSSTHTAVTVDIESLETKSV 454
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 3/128 (2%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 84
+ K + +LKL++L + + +ECVIIGTL+KHQ+ KP+IL+E+SE+ +L ++ S
Sbjct: 70 VAKWGDIRILKLAELEDFEGQECVIIGTLYKHQKSKPSILQELSEDHQLTLLEPKPNYCS 129
Query: 85 DSDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
+ D+L LEDE+ RI L +I D+ N VTGVV A+ G +G F + + C+ P PR+
Sbjct: 130 EKDQLFLEDEMLRIKLMVDIADLKNYVTGVVCAVLGYKEKDGTFAIKEWCF--PGCIPRS 187
Query: 144 TLSNNENK 151
L + ++K
Sbjct: 188 LLVSPQSK 195
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
II CPD+YF GN +KFETK + E + V ++ + + T T V I +L
Sbjct: 398 IINHCPDIYFVGNTAKFETKLWKGEGDQIVRLICIPQFSSTHTAVTVDIESL 449
>gi|380018199|ref|XP_003693022.1| PREDICTED: DNA polymerase delta small subunit-like [Apis florea]
Length = 444
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 19/223 (8%)
Query: 100 LHGNIDIHNQVTGVVVAI------KGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
+ GN I T +V I K + + N K+ D+ F + N
Sbjct: 224 MAGNTTIQKDNTSIVCLIIAGNITKSSDIMNTNTKLGDIIKIVDTFLSNLAMCCN----- 278
Query: 154 NHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTS 213
+ LMPGE DP N LPQ+P HPCL P++S++ +F TNP+I ++E ++++GTS
Sbjct: 279 ------ITLMPGEHDPTNAMLPQKPFHPCLLPKSSRFESFKSTTNPWIGKIEERIIIGTS 332
Query: 214 GQPVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYF 271
GQ + DI K + +N PL+ LE +L H+ PTAPDTL P+Y+ D II+ CPD+YF
Sbjct: 333 GQSIEDIIKVTGETNISPLEWLEKSLLWRHMCPTAPDTLLACPYYEKDLFIIKKCPDIYF 392
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
GN +KFETK + E+++ VRLISVP F + T I++L L+
Sbjct: 393 VGNTNKFETKLWKGEENQIVRLISVPRFDMTYTAVIVDLENLD 435
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS 86
K ++V ++KL+DL + ++C++IGTL+KHQQ KP+IL+E+SE+ +L + + S+
Sbjct: 71 KWENVPIIKLADLENLEGQQCILIGTLYKHQQWKPSILRELSEDHQLSLSCSKSDYCSEK 130
Query: 87 DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
D+ LEDE+ RI L G+ +++ VTGVV AI G +G F V D C+ P P+ +L
Sbjct: 131 DQSFLEDEMLRIKLVGDQVNLKQIVTGVVCAILGNENNDGTFMVKDWCF--PGCAPKESL 188
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II+ CPD+YF GN +KFETK + E+ + V ++ + + T T
Sbjct: 383 IIKKCPDIYFVGNTNKFETKLWKGEENQIVRLISVPRFDMTYT 425
>gi|340716985|ref|XP_003396970.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
terrestris]
Length = 448
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPGE DP N+ LPQ+P HPCL P++S+ +F TNP+I ++EG+++ GTSGQ + D
Sbjct: 283 ITLMPGEHDPTNSMLPQRPFHPCLLPKSSRLESFKSTTNPWISKIEGRIITGTSGQSIQD 342
Query: 220 IAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K + + + L+ LE TL H+ PTAPDTL P+Y D I+E+CPD+YF GN K
Sbjct: 343 IIKVAGETGISALEWLEKTLLWRHICPTAPDTLLACPYYKKDLFIMETCPDIYFVGNTDK 402
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK + ++++ VRLISVP F +S+T I+NL L+
Sbjct: 403 FETKLWKGDENQIVRLISVPRFDTSQTAVIVNLENLD 439
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS 86
K +V ++KL+DL + ++C+IIGTL+KHQQ KP+IL+E+SEE + ++ S+
Sbjct: 71 KWGNVPIVKLADLENLENQQCIIIGTLYKHQQWKPSILRELSEEHQFNVSCSKPNYCSEK 130
Query: 87 DELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
D+ LEDE+ RI L G +D+ VTGVV A+ G +G F V D C+ P P+ +L
Sbjct: 131 DQPFLEDEMLRIKLVGEQVDLKQIVTGVVCAVLGNENSDGAFTVKDWCF--PGCAPKESL 188
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E+CPD+YF GN KFETK + KG +++L + DT + +I L
Sbjct: 387 IMETCPDIYFVGNTDKFETK---LWKGDENQIVRLISVPRFDTSQTAVIVNL 435
>gi|326433133|gb|EGD78703.1| hypothetical protein PTSG_01682 [Salpingoeca sp. ATCC 50818]
Length = 456
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 138/254 (54%), Gaps = 31/254 (12%)
Query: 83 VSDSDELILEDELQRIPLHGNI------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
+S +D+ L +L + GNI ++ + V+VA GN +++ D
Sbjct: 205 ISKNDKARLSMQLLSDFIQGNIGSTADQELAASIVHVIVA------GNLVWRLDDEHQDL 258
Query: 137 PVFNPRTTLSNNENKYVNHS------------SIEVDLMPGEFDPANTTLPQQPLHPCLF 184
P++ RT + + V H ++ VDLMPG DP++ LPQQP+HPC+F
Sbjct: 259 PLYKKRTMIPES----VGHMREVDLFLAQMGINVRVDLMPGPHDPSDAILPQQPMHPCMF 314
Query: 185 PEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAP 244
P A S+ TNPY + G+ +GTSGQ V DI +FS + L ILE TL + P
Sbjct: 315 PLARNVSSVKGETNPYETTVAGRTFLGTSGQGVDDIYRFSTEEDRLRILEQTLEWAQLFP 374
Query: 245 TAPDTLACYPFYD---NDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFS 301
TAPDTL C+P++ +DP +I SCP VYF GNQ F TK + + + VRL+ VP F
Sbjct: 375 TAPDTLGCFPYHMTDFSDPFVITSCPHVYFAGNQPSFATKLVTGPEGQQVRLVCVPSFSD 434
Query: 302 SRTVAILNLSTLEC 315
+ T +LNL+TLEC
Sbjct: 435 THTAVLLNLATLEC 448
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 9 VYFTG-NQSKFETKTIEIEKGKSVSVL-KLSDLNETDTEECVIIGTLFKHQQLKPNILKE 66
VYFT N K +T K S V+ KL D+ + +ECV+ G L+K LKPNIL E
Sbjct: 53 VYFTRYNSFKKLIETAATNKWPSKHVVPKLLDIEKE--KECVVFGVLYKDMPLKPNILDE 110
Query: 67 I-SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGN 124
+ E P P+ + + SD D L+LED RI L G+ +D+ V+GVVVA+ G + +
Sbjct: 111 YHARENYEAPPPERSKYNSDEDALVLEDMSGRIVLIGDALDVGTHVSGVVVAVLGKALPS 170
Query: 125 GKFKVSDVCYATPVFNPRTTLSNNENKYV 153
G+F+++DVCY P F P+ L YV
Sbjct: 171 GEFQIADVCY--PRFPPQKRLPKIPPSYV 197
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
+I SCP VYF GNQ F TK + +G+ V ++ + ++T T + + TL
Sbjct: 394 FVITSCPHVYFAGNQPSFATKLVTGPEGQQVRLVCVPSFSDTHTAVLLNLATL 446
>gi|320169509|gb|EFW46408.1| DNA polymerase delta small subunit [Capsaspora owczarzaki ATCC
30864]
Length = 484
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+ VD+M G DP N LPQQPLH CLFP A TF V NPY ++G +MGTSGQ
Sbjct: 317 STCPVDVMSGPLDPTNHILPQQPLHRCLFPRAYALQTFQTVPNPYHVAVDGVHIMGTSGQ 376
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
P+ D+ KF + L +LE+TL+ H+APTAPDTLAC+P + DP I+ES P VYF NQ
Sbjct: 377 PIDDMIKFQIGDDRLALLEHTLQGRHLAPTAPDTLACFPL-NADPFILESSPHVYFAANQ 435
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
+F T ++ E ++VRL+ +P F +++T+ +LNL TLEC
Sbjct: 436 PEFATSVLKGEDGQSVRLVLIPTFSTTQTIVLLNLVTLEC 475
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 55/97 (56%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
C +GTL+K LKP+ILKEI+EE LVPQP + SD D ++LED R+ L GN
Sbjct: 114 RRCFAVGTLYKEMTLKPSILKEIAEERDLVPQPPRARYTSDDDFIVLEDSSGRVRLGGNF 173
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP 141
VTG VVA+ GT G+F V + A P P
Sbjct: 174 PSSELVTGDVVAVLGTEQSGGEFVVEEWLMAGPAPQP 210
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
I+ES P VYF NQ +F T ++ E G+SV ++ + + T T
Sbjct: 421 FILESSPHVYFAANQPEFATSVLKGEDGQSVRLVLIPTFSTTQT 464
>gi|350408749|ref|XP_003488499.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
impatiens]
Length = 448
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPGE DP N LPQ+P HPCL P++S+ +F TNP+I ++EG+++ GTSGQ + D
Sbjct: 283 ITLMPGEHDPTNAMLPQRPFHPCLLPKSSRLESFKSTTNPWISKIEGRIITGTSGQSIRD 342
Query: 220 IAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K + + + L+ LE TL HV PTAPDTL P+Y D I+E+CPD+YF GN K
Sbjct: 343 IIKVAGETGISALEWLEKTLLWRHVCPTAPDTLLACPYYKKDLFIMETCPDIYFVGNTDK 402
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK + ++++ VRLISVP F +S+T I+NL L+
Sbjct: 403 FETKLWKGDENQIVRLISVPRFDTSQTAVIVNLENLD 439
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS 86
K +V ++KL+DL + ++C+IIGTL+KHQ KP+IL+E+SEE + ++ S+
Sbjct: 71 KWGNVPIVKLADLENLENQQCIIIGTLYKHQPWKPSILRELSEEHQFNVSCSKPNYCSEK 130
Query: 87 DELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
D+ LEDE+ RI L G +D+ VTGVV A+ G +G F V D C+ P P+ +L
Sbjct: 131 DQPFLEDEMLRIKLVGEQVDLKQIVTGVVCAVLGNENSDGTFMVKDWCF--PGCAPKESL 188
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+E+CPD+YF GN KFETK + KG +++L + DT + +I L
Sbjct: 387 IMETCPDIYFVGNTDKFETK---LWKGDENQIVRLISVPRFDTSQTAVIVNL 435
>gi|383853211|ref|XP_003702116.1| PREDICTED: DNA polymerase delta small subunit-like [Megachile
rotundata]
Length = 444
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPGE+DP N LPQ+PLHPCL P++SK +F TNP+I ++E ++++GTSGQ + D
Sbjct: 281 ITLMPGEYDPTNAMLPQRPLHPCLLPKSSKLESFKSTTNPWIGKVEERIIIGTSGQSIKD 340
Query: 220 IAKFSN--LSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K + +P++ LE TL H+ PTAPDTL P+Y+ D I++ CPD+YF GN K
Sbjct: 341 IIKATGEIGISPIEWLERTLLWRHMCPTAPDTLLACPYYEKDLFIMKECPDIYFVGNTDK 400
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK + E K VRLISVP F ++ T I+NL L+
Sbjct: 401 FETKLWKGENKKMVRLISVPCFSTTHTAVIVNLKNLD 437
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 14/148 (9%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS 86
K ++ ++KL++L + ECVIIGTL+KHQQ KP+IL+E+SE+ +L + + S+
Sbjct: 68 KWGNIPIVKLAELENLEGRECVIIGTLYKHQQWKPSILRELSEDHQLSLPSSKSDYCSEK 127
Query: 87 DELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
D+ LEDE+ RI L G +D+ VTGVV A+ G +G F V + C+ P P+ ++
Sbjct: 128 DQPFLEDEMLRIKLVGEEVDLKQIVTGVVCAVLGKENNDGTFMVKEWCF--PDCAPKESV 185
Query: 146 SN--NENKYV---------NHSSIEVDL 162
+N +E K V N S+E++L
Sbjct: 186 TNCTSEGKVVLVSGLDLSTNSKSLEINL 213
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
I++ CPD+YF GN KFETK + E K V ++ + + T T
Sbjct: 385 IMKECPDIYFVGNTDKFETKLWKGENKKMVRLISVPCFSTTHT 427
>gi|383853092|ref|XP_003702058.1| PREDICTED: DNA polymerase delta small subunit-like [Megachile
rotundata]
Length = 445
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 107/158 (67%), Gaps = 2/158 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
V L+PGEFDP T+PQQPLHPC+ P+ +++ +F+ TNP+I + +++ G+SGQP+ D
Sbjct: 280 VILLPGEFDPTCHTIPQQPLHPCVLPQCARFKSFYGATNPWIGSINSRIIAGSSGQPIID 339
Query: 220 IAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K + L+N PL LE TL H APTAPDT+ YP DP ++ CPDVYF GN K
Sbjct: 340 IMKVAGLANVSPLTWLERTLDWQHYAPTAPDTIPTYPSCKTDPFVMTECPDVYFAGNMDK 399
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
++TK + E+ + +RLI +P F ++TV +++L LEC
Sbjct: 400 YDTKLLTAEEGQIIRLICIPKFSKTQTVVLVDLQDLEC 437
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
Query: 27 KGKSVSVLKLSDLNE-TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 85
K V+ +S+++E T+ + ++IGTL+KHQ+LKP+IL+E+SEEL+L QP +++ S
Sbjct: 55 KWAQYKVVTISEVSERTENNDSIVIGTLYKHQELKPSILRELSEELQLATQPARSNYASF 114
Query: 86 SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY--ATPVFNPR 142
D L LEDE RI L GN ++I + VTGVV A+ G + NG F V D CY P +
Sbjct: 115 KDVLYLEDESLRIKLVGNHMNIQDAVTGVVCAVLGHELENGSFLVIDWCYPGCCPKPSAF 174
Query: 143 TTLSNNENKYVNHSSIEV 160
LS+++ K + S +++
Sbjct: 175 NKLSSDKGKILIMSGLDL 192
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
++ CPDVYF GN K++TK + E+G+ + ++ + ++T T
Sbjct: 383 FVMTECPDVYFAGNMDKYDTKLLTAEEGQIIRLICIPKFSKTQT 426
>gi|302814917|ref|XP_002989141.1| hypothetical protein SELMODRAFT_129338 [Selaginella moellendorffii]
gi|300143041|gb|EFJ09735.1| hypothetical protein SELMODRAFT_129338 [Selaginella moellendorffii]
Length = 425
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 2/158 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DPAN TLPQQPLH CLFP AS YSTF TNP+ FE++G +GTSGQ
Sbjct: 258 AAMPVDIMPGANDPANFTLPQQPLHKCLFPGASAYSTFLSATNPHRFELDGIEFLGTSGQ 317
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA-CYPFYDNDPMIIESCPDVYFTGN 274
V D+ K+S + ++++E TLR H+APTAPDTLA C+P+ D DP ++++CP VYF GN
Sbjct: 318 NVDDLEKYSEAKDVIELMERTLRWRHIAPTAPDTLAGCFPYTDKDPFVLDTCPHVYFCGN 377
Query: 275 QSKFETKTIE-IEKDKNVRLISVPDFFSSRTVAILNLS 311
Q F ++ + + K VR IS+P F S T ++ S
Sbjct: 378 QKSFMSRLVTGMYIWKLVRAISIPRFCDSGTAVMVTCS 415
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L D + CV+IGT++K +LKP+IL E ++E + P + F+ D L+LED R+
Sbjct: 48 LGLKDGKRCVVIGTVYKQMKLKPSILDEYAKE-RTKPLATASSFMHSEDYLVLEDASGRV 106
Query: 99 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 132
L G++ + N VTG+V+A G +G F V +
Sbjct: 107 KLVGSMIVPSNYVTGIVIAAWGQGGKDGDFFVRQI 141
>gi|198433881|ref|XP_002126992.1| PREDICTED: similar to XlCdc1 [Ciona intestinalis]
Length = 461
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 111/166 (66%), Gaps = 2/166 (1%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSGQ 215
+ VDLM GEFDP N LPQ+P+HPC+FP + ++ +TFH V+NPY ++ G ++GTSGQ
Sbjct: 279 VSVDLMGGEFDPTNHVLPQKPMHPCMFPSSRRFYDNTFHTVSNPYECKINGVYILGTSGQ 338
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ ++ +SN+ + + +L + C HVAPTAPDTL C+PFY +DP IIE CP V+F+GNQ
Sbjct: 339 NLDNLKSYSNVDDDIKLLSSMIECQHVAPTAPDTLGCFPFYKSDPFIIEQCPHVFFSGNQ 398
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
SK+ + + + + V L++VP F + + ++NL L + E
Sbjct: 399 SKYFSSVKKGAEGQKVLLLAVPAFTQTCSAVLVNLKDLTAEEINFE 444
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V + KLS++ E E+C I+GTLFK +L+P+ILKEISEE+ + QP+ F+SD D
Sbjct: 63 GDGVKINKLSEIEEG--EKCCIVGTLFKQMELQPSILKEISEEVHVQIQPERKRFISDDD 120
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLS 146
+LILED +QRI L GNI + TG VVA+ G +G F V D YA P P L
Sbjct: 121 KLILEDTMQRISLTGNISAGDCFTGTVVALLGKETKSGHFNVEDFTYAGLPSQIPAPDLV 180
Query: 147 NNEN 150
N+N
Sbjct: 181 GNDN 184
>gi|328789052|ref|XP_001121190.2| PREDICTED: DNA polymerase delta small subunit-like [Apis mellifera]
Length = 443
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPGE DP N LPQ+P HPCL P++S++ F TNP+I ++EG++++GTSGQ + D
Sbjct: 278 ITLMPGEHDPTNAMLPQKPFHPCLLPKSSRFENFKSTTNPWIGKIEGRIIIGTSGQSIED 337
Query: 220 IAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K + ++ PL+ LE +L H+ PTAPDTL P+Y+ D II+ CPD+YF GN K
Sbjct: 338 IIKVTGETDISPLEWLEKSLLWRHMCPTAPDTLLACPYYEKDLFIIKKCPDIYFIGNTDK 397
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK + E+++ VRLISVP F + T I++L L+
Sbjct: 398 FETKLWKGEENQIVRLISVPRFNMTCTAVIVDLENLD 434
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS 86
K +++ ++KL+DL + ++C++IGTL+KHQQ KP+IL+E+SE+ +L + + S+
Sbjct: 71 KWENIPIIKLADLENLEGQQCILIGTLYKHQQWKPSILRELSEDHQLSLSCSKSDYCSEK 130
Query: 87 DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
D+ LEDE+ RI L GN +++ VTGVV A+ G +G F V D C+
Sbjct: 131 DQSFLEDEMLRIKLVGNQVNLKQIVTGVVCAVLGNENSDGTFMVKDWCF 179
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II+ CPD+YF GN KFETK + E+ + V ++ + N T T
Sbjct: 381 FIIKKCPDIYFIGNTDKFETKLWKGEENQIVRLISVPRFNMTCT 424
>gi|332016886|gb|EGI57695.1| DNA polymerase delta small subunit [Acromyrmex echinatior]
Length = 458
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 120 TPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPL 179
T +G+ + K D V R T + Y + +MPG+ DP N LPQ+PL
Sbjct: 255 TLMGHAEGKAQDAAITKEV--ARATTLADSFLYEIAKCCCIIVMPGQHDPTNAMLPQRPL 312
Query: 180 HPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSN--PLDILEYTL 237
HPC+ P S++ +F TNP+I ++ +++MG+SGQP+ DI K + ++ PLD LE TL
Sbjct: 313 HPCILPLTSRFQSFKSATNPWIGKIAERIIMGSSGQPIEDIIKATGETDISPLDWLEKTL 372
Query: 238 RCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVP 297
H+ PTAPDTL YP+ DP II CPD+YF GN KFETK + E+++ VRLI +P
Sbjct: 373 LWKHMCPTAPDTLPVYPYSVKDPFIINYCPDIYFVGNTDKFETKLWKGEENQMVRLICIP 432
Query: 298 DFFSSRTVAILNLSTLE 314
F S+ ++++ TL+
Sbjct: 433 KFSSTHIAVMIDIETLD 449
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 84
+ K V ++KL++L + + ++CVIIGTL+KHQ+ KP+IL E+SE+ +L +++ S
Sbjct: 69 VAKWGDVQIVKLAELEDFERQKCVIIGTLYKHQKCKPSILHELSEDHQLTLSEPKSNYCS 128
Query: 85 DSDELILEDELQRIPLH-GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
+ D+L LEDE+ RI L + D+ N VTGVV AI G NG F++ + C+ P PR+
Sbjct: 129 EKDQLFLEDEMLRIKLVIEDADLKNYVTGVVCAILGYKDKNGSFEIKEWCF--PGCVPRS 186
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
II CPD+YF GN KFETK + E+ + V ++ + + T + I TL
Sbjct: 396 FIINYCPDIYFVGNTDKFETKLWKGEENQMVRLICIPKFSSTHIAVMIDIETL 448
>gi|298711679|emb|CBJ32730.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 508
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
VD+MPGE DPAN TLPQQPLHPCL AS++ VTNP+ ++ ++ +G+SGQP+ D
Sbjct: 301 VDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLD 360
Query: 220 IAKFSNLSNPLD---------ILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
+A+++ D LE L+ H+APTAP+TL CYPF DP ++E CPD++
Sbjct: 361 MARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIF 420
Query: 271 FTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
F GNQ +F T +E R++ VP F ++ A+LNL +LEC L
Sbjct: 421 FAGNQPQFATSILEGADGHKGRVVCVPAFAATGQAALLNLESLECTPL 468
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 33 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL---VPQPQHTHFVSDSDEL 89
V +L ++ E D E V+IGT +K +L+P+IL E E+ + V P + F S+ D L
Sbjct: 96 VDRLVNMREGD--EWVVIGTTYKAMKLRPSILNEFREDRGISMAVVAPVGS-FTSEDDSL 152
Query: 90 ILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+LEDE R+ + G I + V+G+V+A+KGT +G+ V D C A
Sbjct: 153 VLEDESGRVSISGPGIQSSSLVSGLVIAVKGTVTASGEMLVDDWCPA 199
>gi|428179386|gb|EKX48257.1| DNA polymerase delta small subunit [Guillardia theta CCMP2712]
Length = 458
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ VD++PG DP+N +PQQP H CL P A+ YS+F P TNP E EG +++GTSGQ
Sbjct: 287 SSVAVDILPGAGDPSNVFMPQQPFHNCLLPSANTYSSFRPTTNPCAKE-EGVIIIGTSGQ 345
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V DI + S + +PLD+++ L+ H+APTAPDTL C+P D DP I+ CP ++F GNQ
Sbjct: 346 NVEDIQRCSEVEDPLDVMQNLLQWRHLAPTAPDTLPCFPVKDEDPFILPHCPHIFFAGNQ 405
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
F ++TI+ EK + L+SVP F ++T +++ TL
Sbjct: 406 KTFGSRTIDGEKGQKSLLVSVPSFSRTKTAVEVDVRTL 443
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQP--QHTHFVSDSDELILEDELQRIPLH- 101
++ +I+GTL K + +PNIL E +++++ + + H+ SD D +I+EDE R+ L
Sbjct: 80 QKSMIVGTLLKVMKFRPNILDEFNKDVENISNESFKRNHYSSDDDYVIMEDESGRVNLRF 139
Query: 102 --GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
N VTGV++A G +G F+V ++
Sbjct: 140 PEDNNMARMLVTGVILAAYGQLGEDGTFQVDEL 172
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
I+ CP ++F GNQ F ++TI+ EKG+ ++ + + T T V + TL
Sbjct: 391 FILPHCPHIFFAGNQKTFGSRTIDGEKGQKSLLVSVPSFSRTKTAVEVDVRTL 443
>gi|302811339|ref|XP_002987359.1| hypothetical protein SELMODRAFT_125908 [Selaginella moellendorffii]
gi|300144994|gb|EFJ11674.1| hypothetical protein SELMODRAFT_125908 [Selaginella moellendorffii]
Length = 442
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 137/253 (54%), Gaps = 38/253 (15%)
Query: 80 THFVSDSDELILEDELQRIPLHGN-IDI-HNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
T + D E +L ++ R+ + GN +D+ +N + G ++ K K D+ A
Sbjct: 197 TGHLGDEQEQMLSAQVVRLIVAGNSLDVQYNLLAGQAISAKDQARLTEPVKELDIVLAQV 256
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+++ VD+MPG DPAN TLPQQPLH CLFP AS YSTF T
Sbjct: 257 T-----------------AAMPVDIMPGANDPANFTLPQQPLHKCLFPGASAYSTFLSAT 299
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA-CYPFY 256
NP+ FE++G +GTSGQ V D+ K+S + ++++E TLR H+AP+APDTLA C+P+
Sbjct: 300 NPHRFELDGIEFLGTSGQNVDDLEKYSEAKDVIELMERTLRWRHIAPSAPDTLAGCFPYT 359
Query: 257 DNDPMIIESCPDVYFTGNQSKFETKTIE------------------IEKDKNVRLISVPD 298
D DP ++++CP VYF GNQ F T+ + + + K VR IS+P
Sbjct: 360 DKDPFVLDTCPHVYFCGNQKSFMTRLVTGMYICLALHRLFLTADCFLVEGKLVRAISIPR 419
Query: 299 FFSSRTVAILNLS 311
F S T ++ S
Sbjct: 420 FCDSGTAVMVTCS 432
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L D + CV+IGT++K +LKP+IL E ++E + P + F+ D L+LED R+
Sbjct: 48 LGLKDGKRCVVIGTVYKQMKLKPSILDEYAKE-RTKPLATASSFMHSEDYLVLEDASGRV 106
Query: 99 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 132
L G++ + N VTG+V+A G +G F V +
Sbjct: 107 KLVGSMIVPSNYVTGIVIAAWGQGGKDGDFFVRQI 141
>gi|307175177|gb|EFN65270.1| DNA polymerase delta small subunit [Camponotus floridanus]
Length = 460
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 127/228 (55%), Gaps = 15/228 (6%)
Query: 100 LHGNIDIHNQVTGVV-VAIKG----------TPVGNGKFKVSDVCYATPVFNPRTTLSNN 148
+ GN + T +V + I G T +G+ + K D A V T L
Sbjct: 224 MAGNAIVQENATCIVQIIIAGNSVKTVTKTNTLMGHAEGKAQDAAIANEVAVATTLLDVF 283
Query: 149 ENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKL 208
+ I LMPG+ DP N LPQ+PLHPC+ P S++ +F TNP+I ++ ++
Sbjct: 284 LAEIATCCCI--TLMPGQHDPVNAMLPQKPLHPCILPLTSRFESFKGATNPWIGKIAERV 341
Query: 209 LMGTSGQPVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
+MG+SGQP+ DI K + ++ PLD LE TL H+ PTAPDTL +P+ DP II C
Sbjct: 342 IMGSSGQPIDDIIKATGATDISPLDWLERTLFWRHMCPTAPDTLPVHPYSVKDPFIINYC 401
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
PD+YF GN KFETK E+++ VRLI +P F S+ ++++ TL+
Sbjct: 402 PDIYFVGNTDKFETKLWRGEENQVVRLICIPKFSSTNLAVMVDIETLD 449
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 83/128 (64%), Gaps = 3/128 (2%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 84
I K V +LKL++L + + ++CVI+GTL+KHQ+ KP+IL E+SE+ +L +++ S
Sbjct: 69 IAKWGKVKILKLAELEDFEGQQCVIVGTLYKHQKWKPSILHELSEDYQLTLPELRSNYCS 128
Query: 85 DSDELILEDELQRIPLH-GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
+ D+L LEDE+ RI L + ++ N VTG+V AI G +G F V + C+ P P++
Sbjct: 129 EKDQLFLEDEMLRIRLLIEDAEMKNYVTGIVCAILGHKEKDGNFVVKEWCF--PGCVPKS 186
Query: 144 TLSNNENK 151
+L+ ++K
Sbjct: 187 SLTQLKSK 194
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
II CPD+YF GN KFETK E+ + V ++ + + T+ V I TL
Sbjct: 397 IINYCPDIYFVGNTDKFETKLWRGEENQVVRLICIPKFSSTNLAVMVDIETL 448
>gi|340716397|ref|XP_003396685.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
terrestris]
Length = 445
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 162 LMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
LMPGEFDP TLPQQPLHPC+ P+ ++ +F+ VTNP+I + +++ G+SGQP+ DI
Sbjct: 282 LMPGEFDPTCHTLPQQPLHPCILPQCFRFKSFYGVTNPWIGSINSRIVAGSSGQPIIDIM 341
Query: 222 KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
K + L + PL LE TL H APTAPDT+ YP + DP II CPD+YF GN K++
Sbjct: 342 KVAGLVDISPLMWLERTLLWRHYAPTAPDTIPAYPSSEIDPFIITECPDIYFVGNMDKYD 401
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
TK ++ + +RLI +P F ++T ++NL LE
Sbjct: 402 TKLFTADEGQTIRLICIPTFSKTQTGVLVNLQDLE 436
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
+ I+ K V++ +LS+ NE DT C+IIGTL+KHQ+LKP++L+E+S EL+L QP
Sbjct: 49 LQKAKIKWGHNKIVTLEQLSERNENDT--CIIIGTLYKHQELKPSLLRELSTELQLQTQP 106
Query: 78 QHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
++ S D L LEDE RI L N I+I + VTG+V A+ G + +G+ V D C
Sbjct: 107 ARANYASFKDILYLEDETLRIKLVDNHINIQDVVTGIVCAVLGHDLKDGELSVIDWC 163
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II CPD+YF GN K++TK ++G+++ ++ + ++T T
Sbjct: 383 FIITECPDIYFVGNMDKYDTKLFTADEGQTIRLICIPTFSKTQT 426
>gi|301095655|ref|XP_002896927.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
gi|262108574|gb|EEY66626.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
Length = 458
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 108/181 (59%), Gaps = 16/181 (8%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VDLMPG DP+N TLPQQ HPCLFP +S + +F VTNPY ++ G L G SGQ
Sbjct: 276 AAMCVDLMPGASDPSNYTLPQQSFHPCLFPRSSHFQSFRCVTNPYEAQVGGVQLFGDSGQ 335
Query: 216 PVSDIAKFS----------------NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDND 259
P+ + + + LD LE + H APTAPD LAC+P + D
Sbjct: 336 PLHSMLQCTLPKRDDNDEKMATEEQEQERALDYLERCVEWRHAAPTAPDILACFPMANED 395
Query: 260 PMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLV 319
P I+E+CP VYF+GNQ +F T+ ++ KD+ VRLI+VP F + T+ I++L L C +
Sbjct: 396 PFILETCPHVYFSGNQPRFSTRLVKGGKDQQVRLITVPSFSETSTIVIVDLKDLSCFPIT 455
Query: 320 V 320
+
Sbjct: 456 I 456
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 9 VYFTGNQSKFETKTIEIEK---GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILK 65
+Y + Q + ++++++ G+ + K+ DL + D +ECV+IGTL K + KP+I
Sbjct: 35 IYVSRLQQLRDVVSVQVQEHTAGRIPVLAKVIDL-KADGQECVLIGTLLKVLEAKPDIFD 93
Query: 66 EISEELKLVP-QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVG- 123
++ E + P + + DEL+LEDE R+ L GNID+ VTGVV+ ++G
Sbjct: 94 ALTSESGVKPIETIGRPLATKDDELLLEDESGRVQLVGNIDVARFVTGVVLGVRGRVARD 153
Query: 124 --NGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
+G F V +V P F P+ L E++YV
Sbjct: 154 GPDGHFLVEEVYL--PSFPPQHPLPERQESEYV 184
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
I+E+CP VYF+GNQ +F T+ ++ K + V ++ + +ET T
Sbjct: 397 FILETCPHVYFSGNQPRFSTRLVKGGKDQQVRLITVPSFSETST 440
>gi|357626913|gb|EHJ76811.1| DNA polymerase delta small subunit [Danaus plexippus]
Length = 439
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 108/159 (67%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+DLMPG DP LPQ+P H CLFP+A +Y +F+ V+NPY ++ G + +GTSG+P+ D
Sbjct: 278 LDLMPGCKDPTGIMLPQKPFHYCLFPKAIEYKSFNRVSNPYECDIGGFVCLGTSGEPIRD 337
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
I + S + LD+++ TL H+APT PD + C P D DP I +CP +YF+GN ++FE
Sbjct: 338 IMQNSEIDKHLDVMKKTLEWRHMAPTCPDNVPCTPCIDTDPFTIYNCPAIYFSGNCTEFE 397
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
T+ + + VR++ +PDF ++TV ++NL+ LEC+S+
Sbjct: 398 TEIFNGDDGQKVRIVCIPDFCETKTVVLVNLANLECYSM 436
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 33 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 92
+LKL DL + T C+IIGTLFK Q+LKP+ILKE+S++L+++PQP THFV ++D L+LE
Sbjct: 73 ILKLCDLRDKGTP-CIIIGTLFKLQELKPSILKELSDQLEILPQPTRTHFVHETDSLVLE 131
Query: 93 DELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPRTTLSNNE 149
DELQRI L G+ ID++ VTGVVVAI G+ +G F V DVC+A V P TL+N+
Sbjct: 132 DELQRIKLSGDCIDVNKVVTGVVVAILGSEDEDGIFTVKDVCWAGCNVQKPLPTLNNDR 190
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 3 IESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
I +CP +YF+GN ++FET+ + G+ V ++ + D ET T
Sbjct: 381 IYNCPAIYFSGNCTEFETEIFNGDDGQKVRIVCIPDFCETKT 422
>gi|350406313|ref|XP_003487727.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
impatiens]
Length = 445
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 162 LMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
LMPGEFDP TLPQQPLHPC+ P+ ++ +F+ VTNP+I + +++ G+SGQP+ DI
Sbjct: 282 LMPGEFDPTCHTLPQQPLHPCILPQCFRFKSFYGVTNPWIGSINSRIVAGSSGQPIIDIM 341
Query: 222 KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
K + L + PL LE TL H APTAPDT+ YP DP II CPD+YF GN K++
Sbjct: 342 KVAGLVDISPLMWLERTLLWRHYAPTAPDTIPAYPSSKIDPFIITECPDIYFVGNMEKYD 401
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
TK ++ + +RLI +P F ++T ++NL LE
Sbjct: 402 TKLFTADEGQTIRLICIPTFSKTQTGVLVNLQDLE 436
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
+ I+ K V++ +LS+ NE DT C+IIGTL+KHQ+LKP++L+E+S EL+L QP
Sbjct: 49 LQKAKIKWGHNKIVTLEQLSERNENDT--CIIIGTLYKHQELKPSLLRELSTELQLQTQP 106
Query: 78 QHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
++ S D L LEDE RI L N I+I + VTG+V A+ G + +G+ V D C
Sbjct: 107 ARANYASFKDILYLEDETLRIKLVDNHINIQDVVTGIVCAVLGHELKDGELSVIDWC 163
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II CPD+YF GN K++TK ++G+++ ++ + ++T T
Sbjct: 383 FIITECPDIYFVGNMEKYDTKLFTADEGQTIRLICIPTFSKTQT 426
>gi|301095643|ref|XP_002896921.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
gi|262108568|gb|EEY66620.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
Length = 473
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 108/181 (59%), Gaps = 16/181 (8%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VDLMPG DP+N TLPQQ HPCLFP +S + +F VTNPY ++ G L G +GQ
Sbjct: 291 AAMCVDLMPGASDPSNYTLPQQSFHPCLFPRSSHFQSFRCVTNPYEAQVGGVQLFGDAGQ 350
Query: 216 PVSDIAKFS----------------NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDND 259
P+ + + + LD LE + H APTAPD LAC+P + D
Sbjct: 351 PLHSMLQCTLPKRDDNDEKMATEEQEQERALDYLELCVEWRHAAPTAPDILACFPMANED 410
Query: 260 PMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLV 319
P I+E+CP VYF+GNQ +F T+ ++ KD+ VRLI+VP F + T+ I++L L C +
Sbjct: 411 PFILETCPHVYFSGNQPRFSTRLVKGGKDQQVRLITVPSFSETSTIVIVDLKDLSCFPIT 470
Query: 320 V 320
+
Sbjct: 471 I 471
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 9 VYFTGNQSKFETKTIEIEK---GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILK 65
+Y + Q + ++++++ G+ + K+ DL + D +ECV+IGTL K + KP+I
Sbjct: 50 IYVSRLQQLRDVVSVQVQEHTAGRIPVLAKVIDL-KADGQECVLIGTLLKVLEAKPDIFD 108
Query: 66 EISEELKLVP-QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVG- 123
++ E + P + + DEL+LEDE R+ L GNID+ VTGVV+ ++G
Sbjct: 109 ALTSESGVKPIETIGRPLATKDDELLLEDESGRVQLVGNIDVARFVTGVVLGVRGRVARD 168
Query: 124 --NGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
+G F V +V P F P+ L E++YV
Sbjct: 169 GPDGHFHVEEVYL--PSFPPQHPLPERQESEYV 199
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
I+E+CP VYF+GNQ +F T+ ++ K + V ++ + +ET T
Sbjct: 412 FILETCPHVYFSGNQPRFSTRLVKGGKDQQVRLITVPSFSETST 455
>gi|339244651|ref|XP_003378251.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
gi|316972858|gb|EFV56504.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
Length = 474
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
I VD+MPG+ DPAN LPQQPLH CLFP + K T + TNPY ++G +GTSGQ V
Sbjct: 280 ISVDVMPGDMDPANHLLPQQPLHKCLFPRSGKIDTLNRATNPYWASIDGVEFLGTSGQNV 339
Query: 218 SDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
DI +FS+ + L I++ TL GH+ PT PDT+ CYP+ D DP I++ P VYF GNQ
Sbjct: 340 DDIYRFSSCEDRLTIMKNTLTWGHLCPTCPDTIGCYPYKDQDPFILDRLPHVYFAGNQPT 399
Query: 278 FETKTIEIEKDKN-VRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
F + ++ VR++S+P F + A+++L TL +V E
Sbjct: 400 FGVGQFHCDDGQHVVRVVSLPAFCDTGCAALVDLVTLAVEPIVFE 444
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 22/157 (14%)
Query: 10 YFTGNQSKFE-TKTIEIEK-----GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
YF +S+ E +T IEK G+S + ++S+L E EECV IGT+ K Q L+PN+
Sbjct: 34 YFYIYRSRLEYGRTALIEKAHKTYGESKPIRRISELVER--EECVTIGTVCKIQDLRPNV 91
Query: 64 LKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPV 122
LKEI++E ++PQP SD+DE++LEDE RI L G+++ +VVA+ G
Sbjct: 92 LKEIADEGHVIPQPIAPLKCTSDTDEVVLEDENLRIKLIGSVE------SIVVAVCGMVT 145
Query: 123 GNGKFKVSDVCY------ATPVFNPRTTLSNNENKYV 153
GKF V D+ + PV +P +T S +++YV
Sbjct: 146 SGGKFHVDDIIFLPVSAPTKPVADPGST-SQVDSRYV 181
>gi|307189556|gb|EFN73926.1| DNA polymerase delta subunit 2 [Camponotus floridanus]
Length = 445
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Query: 160 VDLMPGEFDPA-NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
V LMPGEFDPA N ++PQQP HPC ++++ + H TNP+I ++ G+++ G+ G+P++
Sbjct: 279 VVLMPGEFDPACNYSMPQQPFHPCTLQKSARLKSLHGATNPWIGDIGGRIVAGSCGRPIA 338
Query: 219 DIAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
DI K + L + L+ LE TL H APT PDTL +PF+ NDP +++ CPD+YF GN
Sbjct: 339 DIMKIAGLCELSSLEWLERTLIWRHYAPTGPDTLPIHPFFKNDPFVMKECPDIYFAGNMD 398
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVED 322
++TK I ++ + +RLI VP F ++T ++NL L S+ D
Sbjct: 399 VYDTKLITTDEGQTIRLICVPKFSETKTAVLVNLQDLTTQSISFGD 444
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Query: 27 KGKSVSVLKLSDLNETDTEEC-VIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVS 84
K + S +++S L D E+ ++IG L+K Q+LKP++L+E+S+EL+L V QP ++ S
Sbjct: 55 KWTNYSYIEISRLALEDPEKSYILIGVLYKDQKLKPSLLRELSKELQLKVAQPS-KNYAS 113
Query: 85 DSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
+D+L LEDE RI L GN +++ VTG+V AI G NG V D C+ P + P+
Sbjct: 114 ANDKLFLEDETLRIRLVGNHVNVQEVVTGLVCAILGHE-ENGTLWVEDWCF--PGYCPKP 170
Query: 144 TLSNN 148
+S+
Sbjct: 171 CISSG 175
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
+++ CPD+YF GN ++TK I ++G+++ ++ + +ET T
Sbjct: 383 FVMKECPDIYFAGNMDVYDTKLITTDEGQTIRLICVPKFSETKT 426
>gi|328872180|gb|EGG20547.1| DNA polymerase delta subunit 2 [Dictyostelium fasciculatum]
Length = 495
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 110/159 (69%), Gaps = 1/159 (0%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD++PGE DP+ +LPQ P + CLFP +++ F+PVTNPY + GK+ +GTSGQ
Sbjct: 320 SLPVDILPGESDPSIQSLPQLPFNACLFPFSAQNINFNPVTNPYESVIGGKIFLGTSGQN 379
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ +I+K+ N+S+ L++L+ TL H+APTAPDTL+C P + DP II CP VYF GN
Sbjct: 380 IENISKYMNVSSKLELLQNTLEWRHLAPTAPDTLSCAPL-EQDPFIIVCCPHVYFMGNGD 438
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
+FE+K IE E + V ++ VP F + TV ++NL TLE
Sbjct: 439 RFESKYIEGENGEQVCIVVVPKFSETGTVVLVNLRTLEA 477
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP--Q 78
K +I KG V+ + L+ +E +++GTL+K LKPNILK+ +E ++P P +
Sbjct: 89 KVAKIWKGTPVNKI----LHVKPGDEGILVGTLYKEMPLKPNILKQYAENRAILPLPVKK 144
Query: 79 HTHFVSDSDELILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
+ ++SD+D L+ EDE RI L + + + + TG+ VAI+G + +F+V ++
Sbjct: 145 VSSYISDADVLLFEDETGRIKLICDKSMVDGLPTGLNVAIRGKGLPGAEFQVYEI 199
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
II CP VYF GN +FE+K IE E G+ V ++ + +ET T V + TL
Sbjct: 423 FIIVCCPHVYFMGNGDRFESKYIEGENGEQVCIVVVPKFSETGTVVLVNLRTL 475
>gi|159472516|ref|XP_001694397.1| DNA polymerase delta small subunit [Chlamydomonas reinhardtii]
gi|158277060|gb|EDP02830.1| DNA polymerase delta small subunit [Chlamydomonas reinhardtii]
Length = 431
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
VD+MPG DPAN LPQQP+H CLFP A+ + + TNP+ FE G ++G+SGQ V D
Sbjct: 267 VDVMPGPEDPANVALPQQPMHRCLFPGAASHGSLVRATNPHEFECGGVRVLGSSGQVVDD 326
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
+AK+ L + LD+++ TL C H+APTAPDTL CYPF D+DP I+ + P VYF GNQ +F
Sbjct: 327 MAKYCGLRDRLDLMQRTLACRHLAPTAPDTLTCYPFTDDDPFILPATPHVYFAGNQPEFA 386
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
T+ + + F + T+ +LNL TL CH
Sbjct: 387 TRLVPVVVRLVAVPC----FARTGTLVLLNLRTLACH 419
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 37 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 96
S L + +E +IGTL+K+ +LKP+IL E +++ L +F +D D +++ED+
Sbjct: 45 SILEVQEGKEVAVIGTLYKNMKLKPSILDEYTKDRGLKAALGAANFCADDDSVVMEDDGA 104
Query: 97 RIPL---------HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
R+ L H TG+V+A++G G F VS V +A
Sbjct: 105 RMVLSDWGLFLSRHTLPGTPQPRTGLVMAVRGVHEPGGDFFVSAVAFA 152
>gi|378725420|gb|EHY51879.1| DNA polymerase delta subunit 2 [Exophiala dermatitidis NIH/UT8656]
Length = 509
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 120/222 (54%), Gaps = 27/222 (12%)
Query: 119 GTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQP 178
G GN K+ Y +NP T ++ SI V +M GE DPAN +LPQQP
Sbjct: 280 GKKPGNRKY-----GYDASAYNPSPTEHLDQFLAELLPSIPVTIMAGEQDPANASLPQQP 334
Query: 179 LHPCLFPEASKYST---FHP-----------VTNPYIFEMEGKLLMGTSGQPVSDIAKFS 224
+HP +FP + Y+T HP VTNP+ ++G MG SGQPV DI ++
Sbjct: 335 IHPAMFPHSRAYTTANVLHPEEEEEPAWLDSVTNPWDGGIDGWRFMGNSGQPVDDILRYV 394
Query: 225 NLSNP--------LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+L P ++++ LR APTAPDTL C+PF D D +IE CP V+F GNQ
Sbjct: 395 DLGGPDGTGSDGRMEVMMNMLRWRCAAPTAPDTLWCFPFQDRDQFVIEECPHVFFVGNQP 454
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
+FET IE + ++VRLI++P F + + +L+ TLE L
Sbjct: 455 RFETHVIEGSQGQHVRLITIPRFHETGELILLSSETLEVQVL 496
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
Query: 19 ETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV-PQP 77
+ + EI K+ V ++ D+ + C ++GT++ LKPNIL++I++E + P P
Sbjct: 69 DWEDFEIAGEKAQRVERVLDVRQGQL--CWVVGTIYMDMPLKPNILEDIAKEHWIAGPPP 126
Query: 78 QHTHFVSDSD-ELILEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
+H++F +D + +++LEDE R+ L G + +N VTGV+VA+ GT NG F+V D+
Sbjct: 127 RHSYFSADIETQVMLEDESGRLRLTGPMLENNLLVTGVIVAVLGTENANGDFEVLDL 183
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+IE CP V+F GNQ +FET IE +G+ V ++ + +ET
Sbjct: 440 VIEECPHVFFVGNQPRFETHVIEGSQGQHVRLITIPRFHET 480
>gi|391335034|ref|XP_003741902.1| PREDICTED: DNA polymerase delta subunit 2-like [Metaseiulus
occidentalis]
Length = 450
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 100 LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE------NKYV 153
L G I + +V K GN S+ + F+ R + +N + Y+
Sbjct: 215 LTGMIGSNKEVERTARVCKVFICGNSVAARSESEMKSSTFSLRKEVPDNAPFMNILDAYL 274
Query: 154 N--HSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMG 211
N S+ VD+MPG+ DP N LPQQPL+ LFP ++ VTNP+ FE++G +G
Sbjct: 275 NALSKSVPVDIMPGDMDPTNNQLPQQPLNQVLFPRSAVNGNLTSVTNPHEFEIDGVRFLG 334
Query: 212 TSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYF 271
TSGQ V+DI ++S L PLD LE +R H+ P+APDT YP DP +IE P V F
Sbjct: 335 TSGQNVADILRYSRLPGPLDALEAIVRWCHLIPSAPDTTPAYPQQQTDPFVIEETPHVLF 394
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
GNQ +F+ K E ++V L+S+P F+ + T LNL TLE L
Sbjct: 395 AGNQPEFQAKIYTDEAGRSVLLLSIPAFWKTPTCVWLNLRTLEASKL 441
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEEL----KLVPQPQHTHFVSDSDELILEDELQRIPLH 101
+ +++GTLFK +P+IL+EISE++ + +P +F SD DEL+LED QR+ +
Sbjct: 79 QTIVMGTLFKTMPKQPSILREISEDIPEDAECTVEPTD-NFTSDEDELVLEDLRQRVAIR 137
Query: 102 GN--IDIHNQVTGVVVAIKGT-PVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
+ + H VTGV +A+ G + F V DV Y + N + E+KYV
Sbjct: 138 SSDLLSPHKLVTGVPIALMGAVDEEDAHFVVKDVLYIG-IRNQPPVPTIAEDKYV 191
>gi|384253871|gb|EIE27345.1| DNA polymerase delta small subunit like protein [Coccomyxa
subellipsoidea C-169]
Length = 396
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHP----VTNPYIFEMEGKLLMG 211
+++VD+M G DPAN LPQQ LHPCL P A + T H VTNP+ FE++G +G
Sbjct: 222 GAMDVDVMAGATDPANHALPQQALHPCLLPGAVTFPTLHRQALLVTNPHEFEVDGVTFLG 281
Query: 212 TSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYF 271
TSGQ + DI ++S + L +LE L GH+ PTAPDTL Y F D DP +I++ P V F
Sbjct: 282 TSGQNLEDIDRYSTETERLPVLERLLEWGHLVPTAPDTLTAYSFPDRDPFVIDAAPHVLF 341
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
GNQ F T+ +E + + R++ +P F SS T+ ++NL TL+
Sbjct: 342 AGNQPAFATRLVEGLEGQKTRVVCIPKFSSSGTLVLVNLRTLKVQ 386
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 26 EKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 85
++ V V K+ DL E +E ++GTL+K +LKP+IL E ++E + HT FVSD
Sbjct: 11 QQWPGVPVTKILDLPEN--QEVAVLGTLYKEMKLKPSILNEYNKERGIETLTGHTGFVSD 68
Query: 86 SDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
D L+LEDE R+ L G ID VTGV+ A++G NG+F V D+ + P P+ L
Sbjct: 69 DDSLVLEDESARMALRG-IDAGPLVTGVIAAVRGVSAANGEFHVKDMLFIGP--QPQQPL 125
Query: 146 -SNNENKYVNH-SSIEVDLMPGEFDPANTTL 174
+KYV S + V GE PA L
Sbjct: 126 PEATGDKYVALVSGLSVGGEAGE--PARVAL 154
>gi|189193957|ref|XP_001933317.1| DNA polymerase subunit delta-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978881|gb|EDU45507.1| DNA polymerase subunit delta-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 530
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 111/182 (60%), Gaps = 11/182 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-----------TFHPVTNPYIFEME 205
++ + ++PG DP+N LPQQPLHP LFP+A Y+ F VTNP+ +++
Sbjct: 315 TLPITMLPGTNDPSNVALPQQPLHPALFPKARLYAEPPIESNESLNGFDAVTNPWTGDID 374
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++GT GQ VSD+ K+ P++ +E LR VAPTAPDTL CYPF D DP+++
Sbjct: 375 GYRVLGTGGQTVSDLLKYLKGVGPVEAMERMLRWRCVAPTAPDTLWCYPFQDGDPLMLTE 434
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTE 325
CP +Y G Q KFETKTI + V L+SVP F +SR + ++++ + + + V+ E
Sbjct: 435 CPHMYVAGCQKKFETKTITGPAGQKVLLVSVPKFSTSRKIVLVDMESWDVEVVQVKAKGE 494
Query: 326 ER 327
++
Sbjct: 495 KQ 496
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 23 IEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
E++ K+ V ++ D+ E C ++GT++ KPN+L +I ++ + P +
Sbjct: 73 FELDDKKASFVERVLDVRRG--ELCWVVGTVYMDMAGKPNVLDDIEKDNWIADPPHRDTY 130
Query: 83 VSDS--DELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
VS S DE++LEDE R+ + G VTG ++A GT +G F V + YA
Sbjct: 131 VSPSGGDEMMLEDESGRLRVSGEPLQGRVVTGCILAALGTEQDDGSFLVIAIQYA 185
>gi|156346192|ref|XP_001621468.1| hypothetical protein NEMVEDRAFT_v1g221960 [Nematostella vectensis]
gi|156207433|gb|EDO29368.1| predicted protein [Nematostella vectensis]
Length = 285
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 84/121 (69%)
Query: 163 MPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAK 222
MPGEFDP N LPQQPLH C+FPEA Y T VTNPY + G ++GTSGQ VSDI+K
Sbjct: 1 MPGEFDPTNHALPQQPLHRCMFPEAIAYPTMQSVTNPYEAVIGGIRVLGTSGQNVSDISK 60
Query: 223 FSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKT 282
+ N +DILE + C H+APTAPDTL CYP+ D DP I+E CP VYF NQ +++K
Sbjct: 61 VTTFDNSMDILEQNMVCSHLAPTAPDTLDCYPYADQDPFILEKCPHVYFASNQPSYQSKV 120
Query: 283 I 283
+
Sbjct: 121 L 121
>gi|195011536|ref|XP_001983197.1| GH15719 [Drosophila grimshawi]
gi|193896679|gb|EDV95545.1| GH15719 [Drosophila grimshawi]
Length = 435
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VDLMPG FDPAN PQQP H C+FP A + S+F V NPY + G +MGT+GQ
Sbjct: 264 ALHVDLMPGAFDPANFMFPQQPFHKCMFPLAGQLSSFQSVPNPYSCRLNGAHVMGTAGQN 323
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
V D+ ++L + L L TL+ GH+APTAPDTLA YP+ +DP I++ CP VYF GN +
Sbjct: 324 VEDLLSSTSLDSSLLALSSTLKWGHLAPTAPDTLASYPYIGSDPFIMQECPHVYFAGNCA 383
Query: 277 KFETKTIE---IEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
F+T+ +E E K RL+ VP F +++VA+++L TL+C +
Sbjct: 384 SFDTELLEDSRKESSKRTRLVCVPSFSRTQSVALIDLDTLDCREI 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
V ++KL +L C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++ D++I
Sbjct: 54 VPIMKLCELRGEQNVNCIIIGTIYKHQAHKPSILRDISEENQLAPQPQRKNYSEPEDKVI 113
Query: 91 LEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE 149
LEDELQR+ L G+I D N TG+V A+KG +G V +V + L +N
Sbjct: 114 LEDELQRVRLQGDILDGRNLATGIVCAVKGGTDSDGYLNVEEVLFLESGPQKSLALRSNA 173
Query: 150 NKYVNHSSIE 159
K V S ++
Sbjct: 174 GKLVIISGLD 183
>gi|347830780|emb|CCD46477.1| similar to DNA polymerase subunit delta-2 [Botryotinia fuckeliana]
Length = 497
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 116/223 (52%), Gaps = 14/223 (6%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
N + + +I VGN + Y FNP T + S+ + L+PG
Sbjct: 268 NSIASDLDSIAHDTVGNTRKAQKKYGYDASAFNPAPTTHFDNFLAELLPSLPITLLPGPS 327
Query: 168 DPANTTLPQQPLHPCLFPEASKY--------------STFHPVTNPYIFEMEGKLLMGTS 213
DPAN +LPQQP+HP +FP+A Y F VTNP+ E+EG ++GT
Sbjct: 328 DPANASLPQQPIHPAMFPQARAYCGSAPSVIGEEREAGWFDTVTNPWEGEIEGWRVLGTG 387
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ V D+ K+ + L ++E R APTAPDTL YPF D DP II +CP ++F G
Sbjct: 388 GQNVDDVFKYVEGEDRLRMMEAMCRWRCCAPTAPDTLWSYPFQDADPFIINTCPHIFFAG 447
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
NQ F+T +IE + VRLIS+P F + + +L+ TLE
Sbjct: 448 NQPSFDTASIEGPDGQTVRLISIPSFEETGEIVLLDAETLEAE 490
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDS-DELILEDELQRIPL-HGN 103
C + GT++ + LKPNIL++IS++ + P P+ + D DE++LEDE R+ L G
Sbjct: 95 CWVAGTIYMNMPLKPNILEDISKDHWISAPPPRRKYLSGDGEDEIMLEDESGRLRLIGGQ 154
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ VTG +VA+ GT NG F+V D+
Sbjct: 155 LSKELLVTGCIVAVMGTENANGDFEVVDI 183
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
II +CP ++F GNQ F+T +IE G++V ++ + ET
Sbjct: 435 FIINTCPHIFFAGNQPSFDTASIEGPDGQTVRLISIPSFEET 476
>gi|281210659|gb|EFA84825.1| DNA polymerase delta subunit 2 [Polysphondylium pallidum PN500]
Length = 535
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
SI VD++PGE DP N +LPQ PL+ C P + + + ++PV+NPY E+ G++ +GTSGQ
Sbjct: 371 SIPVDVLPGESDPTNLSLPQLPLNFCQTPFSVQNANYNPVSNPYESEIGGRIFLGTSGQN 430
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ + ++ N+ + ++++ L H+APTAPDTLAC P ++DP IIE CP VYF GN
Sbjct: 431 IENAIRYINIQDKIELMHKMLIWRHLAPTAPDTLACSPL-EHDPFIIEQCPHVYFIGNND 489
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLV 319
++ETK I+ E + +RLI VP F + TV ++NL TL+ ++
Sbjct: 490 RYETKLIQGEDGEQIRLILVPKFVDTNTVILVNLKTLDTFPII 532
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN- 103
EEC++IGTL+K LKPNILK+ +++ + + D LILEDE R+ L G+
Sbjct: 175 EECILIGTLYKEMPLKPNILKQYAQD--------KSSLIDVGDLLILEDETGRVKLVGDK 226
Query: 104 --IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE 149
+D H +TG+ VAI+G + + +F++ ++ TP P+ L N E
Sbjct: 227 SLVDSH--LTGLGVAIRGVGLASAEFEIKEIF--TPGLPPQPYLRNFE 270
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
IIE CP VYF GN ++ETK I+ E G+ + ++ + +T+T V + TL
Sbjct: 474 FIIEQCPHVYFIGNNDRYETKLIQGEDGEQIRLILVPKFVDTNTVILVNLKTL 526
>gi|46125573|ref|XP_387340.1| hypothetical protein FG07164.1 [Gibberella zeae PH-1]
Length = 502
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 11/175 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-----------FHPVTNPYIFEME 205
SI V ++PG DPAN + PQQP+HP +FP A Y+ F VTNP+ E+E
Sbjct: 326 SIPVTMLPGAQDPANASYPQQPVHPAMFPAARAYTRDPAAPVDQPGWFDTVTNPWEAELE 385
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++GT GQ V D+ K+ + L ++E R APTAPDTL YPF D+DP ++++
Sbjct: 386 GWRVLGTGGQNVDDVFKYVGSDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQDDDPFVMQT 445
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
CP +YF GNQ +F TK I K ++VRL++VP F +++ + +++ TLE + +
Sbjct: 446 CPHLYFVGNQPQFSTKVIHGPKGQSVRLVTVPSFSATKELVLIDTETLEVERIKI 500
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDELQR 97
L+ E C + GT++ LKPNIL+++S++ + + P T + SD D+++LEDE R
Sbjct: 88 LDVRQGELCYVTGTVYMEMPLKPNILEDVSKD-RWISAPILTPKYFSDDDQIMLEDESGR 146
Query: 98 IPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
I L G+I Q VTG +V + GT NG+F++ D+ +
Sbjct: 147 IRLVGDILKTVQLVTGCIVGVMGTENSNGEFEIIDIKF 184
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGT 52
++++CP +YF GNQ +F TK I KG+SV ++ + + T+E V+I T
Sbjct: 442 VMQTCPHLYFVGNQPQFSTKVIHGPKGQSVRLVTVPSFSA--TKELVLIDT 490
>gi|332020437|gb|EGI60857.1| DNA polymerase delta subunit 2 [Acromyrmex echinatior]
Length = 447
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 160 VDLMPGEFDPA-NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
V LMPGEFDP N ++PQQP HPC ++ ++ + H TNP+I + G+++ G+ G+P+
Sbjct: 279 VVLMPGEFDPTCNYSMPQQPFHPCTLEKSVRFKSLHGATNPWIANIGGRVVAGSCGEPIM 338
Query: 219 DIAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
DI K + LS + L+ LE TL H PT PDTL YPF+ NDP +I PD+YF GN
Sbjct: 339 DIMKIAGLSPLSSLEWLERTLIWRHYTPTGPDTLPIYPFFKNDPFVINEWPDIYFAGNMD 398
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
+++TK + ++++ VRL+ +P F ++T ++NL L
Sbjct: 399 EYDTKLVTVDEEHAVRLVCIPKFSETKTAVLVNLQDL 435
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 41 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 100
E+ + ++IG L+K Q+LKP++L+++S+EL+L Q + ++ S D+L LEDE R+ L
Sbjct: 70 ESSEKSYILIGVLYKDQRLKPSLLRDLSKELQLEAQLSN-NYASIDDQLFLEDETLRVKL 128
Query: 101 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN 147
GN +DI VTG+V A+ G + NG F V D C+ P + S+
Sbjct: 129 VGNHMDIQEVVTGLVCAVLGHELENGTFLVEDWCFPGYYLKPSSVSSS 176
>gi|452823828|gb|EME30835.1| DNA polymerase delta subunit 2 [Galdieria sulphuraria]
Length = 454
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 6/184 (3%)
Query: 135 ATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFH 194
A +FN +S + S+I V L+PGE DP N LPQQPLH L P +SKY++F
Sbjct: 260 AQQLFNAEPLISADRFLTTLSSTIPVTLLPGEADPTNLLLPQQPLHHSLLPSSSKYNSFR 319
Query: 195 PVTNPYIFEMEGKLLMGTSGQPVSDIAKFS-----NLSNPLDILEYTLRCGHVAPTAPDT 249
VTNPY + G+ ++ SGQ + D ++S ++ N L ++E L H+ PTAPDT
Sbjct: 320 RVTNPYQCCINGRKILVCSGQNIDDACRYSTWDWNSVENRLTVMENMLSFRHLCPTAPDT 379
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILN 309
L CYP+YD DP +++ CP VY GNQ + T+ I D VRL+ +PDF ++ V +LN
Sbjct: 380 LPCYPYYDEDPFVLKECPHVYVAGNQHAYGTRLIN-ANDCGVRLLCIPDFSTTGQVVLLN 438
Query: 310 LSTL 313
L TL
Sbjct: 439 LRTL 442
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEE-LKLVP-QPQHTHFVSDSDELILEDELQRIPLHG 102
+ CVIIG ++K LKP+ILKE S+ + VP P FVSDSD +ILEDE RI L+
Sbjct: 76 DNCVIIGVIYKEMDLKPSILKEYSKNPAEPVPILPVKPSFVSDSDVVILEDETGRIRLNF 135
Query: 103 N---IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ + ++ +TG VVA+KG +G F V ++C+
Sbjct: 136 DRCCLGVNILLTGTVVAVKGQETSSGDFSVDELCF 170
>gi|225709974|gb|ACO10833.1| DNA polymerase subunit delta-2 [Caligus rogercresseyi]
Length = 436
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 113/165 (68%), Gaps = 9/165 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHPVTNPYIFEMEGKLLMGTSGQ 215
S++VD++P E +N +LPQQPLH CLFP A+ Y ST VTNPY F++E L+ GTSG
Sbjct: 273 SLKVDILPEE-SLSNASLPQQPLHKCLFPRAAAYVSTLQTVTNPYYFKLEDTLIHGTSGG 331
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DIAK S+LS+PLDI+E L H+APT+PDTL C+P+ D DP+I+E+ P V F+G +
Sbjct: 332 NLRDIAKNSSLSDPLDIMERLLLWAHIAPTSPDTLGCFPYKDRDPLIMENRPHVLFSGGE 391
Query: 276 --SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
S ++T+E +N+ L+S+PDF S ++ +LNL L +
Sbjct: 392 GASALSSRTVE----ENL-LLSLPDFSLSGSMVLLNLKDLSTQEI 431
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G + +LS+L+ T+ ++IGTL+K Q+ KPNIL+++ E QP ++ S D
Sbjct: 74 GPKAPIKRLSELSSGVTDTVLLIGTLYKLQKNKPNILRQLEGE----EQPSRGNYTSSED 129
Query: 88 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
ELILEDE QRI L G+ I+ VTG+++ + G +GKF V + Y
Sbjct: 130 ELILEDEEQRIKLVGDGINKETLVTGIILGVYGRQSQSGKFTVEKIFY 177
>gi|66812748|ref|XP_640553.1| DNA polymerase delta subunit 2 [Dictyostelium discoideum AX4]
gi|60468579|gb|EAL66582.1| DNA polymerase delta subunit 2 [Dictyostelium discoideum AX4]
Length = 521
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VD++PG DP N +LPQ PL+ CLFP + + + TNPY ++ G+LL+GTSGQ
Sbjct: 345 TVPVDIIPGPNDPTNISLPQLPLNSCLFPFSIQNTNLTTCTNPYQSQIGGRLLLGTSGQN 404
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ + +++ N + + E TL H+APTAPDTL C DNDP +IE CPD+YF GNQ
Sbjct: 405 IENASRYMTYENKMSLTESTLIWRHLAPTAPDTLTCAAL-DNDPFVIEQCPDIYFVGNQD 463
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK ++ D+ VRLI +P+F + T+ ++NL TL+
Sbjct: 464 HFETKLLKGPNDEIVRLIFIPNFSETNTIILVNLKTLD 501
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH-FVSDSDELILEDELQRIPLHGN 103
+EC++IGTL+K +LKPNILK +++ ++P P + F+ + D+L ED R+ L G+
Sbjct: 141 DECIMIGTLYKEMELKPNILKAYAQDRAMLPIPDNRESFIGEKDKLFFEDNTGRVKLIGS 200
Query: 104 ID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ + + VTG+ VAI G + + +F+V D+ +
Sbjct: 201 KEMVDSLVTGLNVAILGKGLPDAEFEVRDIVF 232
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
+IE CPD+YF GNQ FETK ++ + V ++ + + +ET+T V + TL
Sbjct: 448 FVIEQCPDIYFVGNQDHFETKLLKGPNDEIVRLIFIPNFSETNTIILVNLKTL 500
>gi|380018443|ref|XP_003693138.1| PREDICTED: DNA polymerase delta small subunit-like [Apis florea]
Length = 420
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 162 LMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
LMPGEFDP LPQQP HPC+ PE S+ +F+ VTNP++ + +++ G+SGQP+ DI
Sbjct: 257 LMPGEFDPTCHRLPQQPFHPCILPECSRVKSFYGVTNPWVGSINSRIIAGSSGQPIMDIM 316
Query: 222 KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
K + L + PL LE TL H APTAPD Y DP II CPD+YF GN K++
Sbjct: 317 KIAGLVDISPLIWLERTLLWCHYAPTAPDATPTYSSSKIDPFIITECPDIYFVGNMDKYD 376
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
TK E+ + +RLIS+P F ++T +++L L
Sbjct: 377 TKIYTAEEGQTIRLISIPKFSKTQTGVLVDLQDL 410
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
VS+ +L + N+ +T CVIIGTL+KHQ+L+P+IL E+SEEL+L+PQP ++ S D L
Sbjct: 61 VSLSQLCERNQNNT--CVIIGTLYKHQELRPSILNELSEELQLIPQPARINYASFKDILY 118
Query: 91 LEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE 149
LEDE RI L G +I+I + VTG+V A+ G + G F V+D C+ P P+ ++ N++
Sbjct: 119 LEDETLRIKLVGTHINIQDIVTGIVCAVCGHELETGAFLVTDWCF--PGCCPKLSILNSQ 176
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II CPD+YF GN K++TK E+G+++ ++ + ++T T
Sbjct: 358 FIITECPDIYFVGNMDKYDTKIYTAEEGQTIRLISIPKFSKTQT 401
>gi|307212533|gb|EFN88256.1| DNA polymerase delta subunit 2 [Harpegnathos saltator]
Length = 446
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 106/157 (67%), Gaps = 3/157 (1%)
Query: 160 VDLMPGEFDPANT-TLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
V LMPG+FDP + ++PQQP HPC +++++ + H VTNP+I ++ G+++ G+ G+P++
Sbjct: 280 VVLMPGQFDPTSYYSMPQQPFHPCTLQKSARFKSMHGVTNPWIGDIGGRVVAGSCGEPIA 339
Query: 219 DIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
DI K + PLD +E TL H APT P+TL +PF+ NDP ++ CPD+YF GN +
Sbjct: 340 DILKVAKSDEVCPLDWMERTLTWRHYAPTGPNTLPVHPFFKNDPFVMTECPDIYFAGNMN 399
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
++++ +E ++ + VRL+ VP F ++T ++NL L
Sbjct: 400 TYDSRLVEGDEGQMVRLVCVPKFSETKTAVLVNLQDL 436
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF 139
++ S+ ++ LEDE R+ L GN +D+ +TGVV A+ G G F V D C+
Sbjct: 110 NYTSNYIKIFLEDETSRVRLMGNHMDMQEIITGVVCAVFGHETETGAFWVEDWCFPGYCS 169
Query: 140 NPRTT 144
P T+
Sbjct: 170 KPCTS 174
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 29/43 (67%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
++ CPD+YF GN + ++++ +E ++G+ V ++ + +ET T
Sbjct: 385 VMTECPDIYFAGNMNTYDSRLVEGDEGQMVRLVCVPKFSETKT 427
>gi|290981052|ref|XP_002673245.1| predicted protein [Naegleria gruberi]
gi|284086827|gb|EFC40501.1| predicted protein [Naegleria gruberi]
Length = 397
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
++++VD+MPG DP+N T+PQQP+HP + +S +ST VTNP++ + G + TSGQ
Sbjct: 228 NTVDVDVMPGPNDPSNVTIPQQPIHPFMLQRSSPFSTCRLVTNPHLIQENGLDVFVTSGQ 287
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
V++I K+S S+ L++++ L+ GH AP+APDT+ CYPF D DP I++ P + GN
Sbjct: 288 TVAEIEKYSTYSSRLEVMKNLLQWGHYAPSAPDTMRCYPFKDTDPFIMKHTPHIMICGNC 347
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
KFET + +++ K+ RL+ VP+F S T+ ++NL TL+C
Sbjct: 348 PKFETTLVTVKETKS-RLVCVPEFVSCPTIVLINLKTLDC 386
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Query: 37 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT--HFVSDSDELILEDE 94
S L+ T E + GTL+K +LKPNIL+E + E + +FVSDSD LILED
Sbjct: 10 SMLDLTMGVEYTVAGTLYKEMKLKPNILREFTTEKNFEAEKVELLDNFVSDSDYLILED- 68
Query: 95 LQRIPLHG---NIDIHNQ------------VTGVVVAIKGTPVGNGKFKVSDVCYATP 137
L+G N+ ++ VTG++ + G +G F D+ + P
Sbjct: 69 -----LNGSRCNVVFESKNSEKNRLMTSQLVTGIIAGLYGQIDSSGTFIAKDIVFNDP 121
>gi|328789089|ref|XP_001122961.2| PREDICTED: DNA polymerase delta small subunit-like [Apis mellifera]
Length = 444
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPGEFDP LPQQP HPC+ PE S++ +F+ VTNP++ + +++ G+SGQP+ D
Sbjct: 280 IILMPGEFDPTYHRLPQQPFHPCILPECSRFKSFYGVTNPWVGSINSRIIAGSSGQPIMD 339
Query: 220 IAKFSNLS-NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
I K + L +PL LE TL H APTAP+T Y DP II CPD+YF GN K+
Sbjct: 340 IMKIAGLDISPLIWLERTLLWCHYAPTAPNTTPTYSSSKIDPFIITECPDIYFVGNMDKY 399
Query: 279 ETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
+TK E+ + +RLI +P F ++T +++L L
Sbjct: 400 DTKIYIAEEGQTIRLICIPKFSKTQTGVLVDLQDL 434
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
VS+ +L + N+ +T C+IIGTL+KHQ+L+ +IL E+SEEL+L+PQP T++ S D L
Sbjct: 61 VSLSQLCERNQNNT--CIIIGTLYKHQELRSSILNELSEELQLIPQPARTNYASFKDILY 118
Query: 91 LEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE 149
LEDE RI L G + +I + VTG+V A+ G + NG F V+D C+ P P+ ++ N++
Sbjct: 119 LEDETLRIKLVGTHKNIQDIVTGIVCAVCGHELENGAFLVTDWCF--PGCYPKLSIFNSQ 176
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDT 44
II CPD+YF GN K++TK E+G+++ ++ + ++T T
Sbjct: 382 FIITECPDIYFVGNMDKYDTKIYIAEEGQTIRLICIPKFSKTQT 425
>gi|156548446|ref|XP_001605019.1| PREDICTED: DNA polymerase delta small subunit-like [Nasonia
vitripennis]
Length = 451
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ LMPG+FD +PQ+ +HP FP A K + VTNP++ ++ ++++GTSGQP+ +
Sbjct: 286 ITLMPGQFDNTTLMMPQRAMHPASFPNARKLKSIKGVTNPWVGQVSERVIVGTSGQPIQN 345
Query: 220 IAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSK 277
I K L ++ LE +L H+ PTAPDT+ C PFY +DP ++ CPD+YF+GN K
Sbjct: 346 IQKVCGLDTLESIEWLERSLEWRHMCPTAPDTIPCMPFYKSDPFVLRECPDIYFSGNMEK 405
Query: 278 FETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
FETK + + VRL+ +P F ++T +++L TL+
Sbjct: 406 FETKLYKGNNGQKVRLLCIPKFAKTQTAVLVDLQTLD 442
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 10/142 (7%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL---VPQPQHTHFVS 84
GK V ++ LSD+ + + C IIGTL+KHQ KP+IL+E+SEE ++ VP+P + S
Sbjct: 66 GKDVHLIPLSDIEDQHGKRCAIIGTLYKHQPNKPSILQELSEEHQMTVPVPKPD---YCS 122
Query: 85 DSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPR 142
D D+L LED+ RI L G+ +++ VTGVV A+ G+ F+V D C+A P+ R
Sbjct: 123 DEDQLFLEDQTSRIRLTGDKVNVRESVTGVVCAVIGSENQKSTFEVEDWCFADCPI--GR 180
Query: 143 TTLSNNENKYVNHSSIEVDLMP 164
+ ++ K V S +E+ P
Sbjct: 181 SVTIKDKGKLVFISGLELASTP 202
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
++ CPD+YF+GN KFETK + G+ V +L + +T T V + TL
Sbjct: 389 FVLRECPDIYFSGNMEKFETKLYKGNNGQKVRLLCIPKFAKTQTAVLVDLQTL 441
>gi|406861039|gb|EKD14095.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 507
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 21/237 (8%)
Query: 94 ELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKY 152
++ R+ + GN I +N+ A+ +GN + Y + +NP T ++
Sbjct: 269 QISRLIIAGNSIAFNNE------AVSHDTIGNTRKAHKKYGYDSSAYNPAPTKHLDDFLA 322
Query: 153 VNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHP--------------VTN 198
S+ + L+PG DPAN +LPQQP+HP +FP+A Y P VTN
Sbjct: 323 TILPSMPITLIPGYSDPANVSLPQQPIHPAMFPQARTYGAIPPSKDGEPAHPGWFDTVTN 382
Query: 199 PYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDN 258
P+ E+EG ++GT GQ V D+ K+ + L +LE R VAPTAPDTL YPF ++
Sbjct: 383 PWDGEIEGWKVLGTGGQNVDDVFKYVESEDRLGMLEAICRWRCVAPTAPDTLWSYPFQED 442
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
DP ++ +CP ++F G+Q KF+T IE + VRLI+VP F + + +++ TLE
Sbjct: 443 DPFVMNACPHLFFVGSQPKFDTAEIEGPNGQTVRLIAVPRFAETGELVLVDSETLEA 499
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGN- 103
C + GT++ LKPNIL +IS++ + P ++S + E ++LEDE R+ L G
Sbjct: 96 CWVAGTIYMEMPLKPNILDDISKDHWISALPPRQKYLSPTGEDLVMLEDESGRLRLVGAP 155
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ VTG +VA+ GT NG F+V D+
Sbjct: 156 LASEMLVTGCIVAVMGTENANGDFEVVDI 184
>gi|156537658|ref|XP_001607856.1| PREDICTED: DNA polymerase delta small subunit-like [Nasonia
vitripennis]
Length = 449
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 110/166 (66%), Gaps = 7/166 (4%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S V LMPGEFDP+ +LPQ LHP + P +S+ + TNP+I ++ +++ G+SGQ
Sbjct: 274 GSCSVTLMPGEFDPSCHSLPQHSLHPNILPISSRGKNLYGTTNPWIGKIGSRIVGGSSGQ 333
Query: 216 PVSDIAKFSNLS-NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
P+ DI K SN+ +PLD LE TL H APTAPDTLA YPF DP+++ P++YF GN
Sbjct: 334 PIEDIMKVSNVDLSPLDWLEKTLEWQHFAPTAPDTLAEYPFDQADPLVMNEIPNIYFVGN 393
Query: 275 QSKFETKTIE-IEKDKN-----VRLISVPDFFSSRTVAILNLSTLE 314
++ETK ++ I+++ + VRLI +P F +S+T +++L +L+
Sbjct: 394 MERYETKLVQSIDRNDDSEGQPVRLICIPKFSTSQTAVLVDLDSLD 439
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 11 FTGNQSKFETKTIEIEKGKSVS--VLKLSDLNETDTEEC--VIIGTLFKHQQLKPNILKE 66
+ S + K ++ + K VL + DL + + EE +IIGTL+KHQ+LKP+ILKE
Sbjct: 32 YKARLSSLKAKVLKRARAKWSKHKVLHIVDLTKDEYEEVPSIIIGTLYKHQELKPSILKE 91
Query: 67 ISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGK 126
I+EEL+ VPQP ++ S D L LED++ R+ L GN+ VTG++ A+ G +G
Sbjct: 92 IAEELQAVPQPSRLNYCSTKDSLYLEDDVSRVKLVGNLTAEALVTGLICAVCGHQTKDGS 151
Query: 127 FKVSDVCYATPVFN 140
F V DVCY P
Sbjct: 152 FWVEDVCYPGPYLR 165
>gi|389623199|ref|XP_003709253.1| DNA polymerase delta small subunit [Magnaporthe oryzae 70-15]
gi|351648782|gb|EHA56641.1| DNA polymerase delta small subunit [Magnaporthe oryzae 70-15]
gi|440465856|gb|ELQ35156.1| DNA polymerase delta small subunit [Magnaporthe oryzae Y34]
gi|440486477|gb|ELQ66338.1| DNA polymerase delta small subunit [Magnaporthe oryzae P131]
Length = 497
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 10/169 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST----------FHPVTNPYIFEMEG 206
+I V +PG DPAN + PQQP+HP +F ++ YS F VTNP+ E+EG
Sbjct: 321 TIPVTFLPGAHDPANASYPQQPIHPAMFTKSRTYSALPGPTAEPGWFDTVTNPWEGEVEG 380
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
++GTSGQ V D+ K+ + + L ++E R APTAPDTL YPF D+DP ++ C
Sbjct: 381 WRVLGTSGQNVDDVFKYVDSDDRLGMMEAMCRWRCSAPTAPDTLWSYPFQDDDPFVMNQC 440
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
P +YF GNQ +F TKTI + + VRLI+VP F +SR + +++ TLE
Sbjct: 441 PHLYFVGNQPEFGTKTITGTEGQEVRLITVPTFSASRELVLVDNETLEV 489
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDS-DELILEDELQ 96
L+ E C + GT++ LKP+IL++++++ + P +F D D ++LED+
Sbjct: 90 LDVRQGELCWVAGTVYMDMPLKPSILEDVAKDRWISAPTSVQKYFSKDGRDSILLEDDSG 149
Query: 97 RIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
R+ L G+I VTG ++A+ GT +G+F+V D+ +
Sbjct: 150 RVRLVGDILKSVVLVTGCIIAVMGTENASGEFEVIDLKF 188
>gi|340508551|gb|EGR34233.1| DNA-directed polymerase delta regulatory subunit, putative
[Ichthyophthirius multifiliis]
Length = 385
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+D+MPGE DP LPQQP++ C F ++ VTNPY FE++G +GTSGQ VSD
Sbjct: 223 LDIMPGEKDPTPMFLPQQPINKCYFMQSINNKNLQCVTNPYKFEIDGIQFLGTSGQNVSD 282
Query: 220 IAKFSNLS-NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
I K+S+L+ N +DILE + H+ P+APDTL CYPF D D II+ P VYF+GN SKF
Sbjct: 283 IKKYSSLNDNEIDILENNIYWRHMFPSAPDTLQCYPFGDQDNFIIDELPHVYFSGNCSKF 342
Query: 279 ETKTIEIEKDK-NVRLISVPDFFSSRTVAILNLSTLECHSL 318
+TK I EK K + RLI +P ++ +LN+S L+ +
Sbjct: 343 DTKLIYDEKVKSSCRLICIPQLSVCKSFILLNISNLDVFQI 383
>gi|400602313|gb|EJP69915.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 524
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 18/183 (9%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST------------------FHPVTN 198
S+ V L+PG DPAN + PQQPLH LFP A Y F VTN
Sbjct: 340 SLPVTLLPGARDPANASYPQQPLHTALFPLARAYGADPTTTTTSKAGGGGVPGWFDSVTN 399
Query: 199 PYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDN 258
P+ E++G ++GT GQ V D+ K+ + + L ++E R APTAPDTL YPF D+
Sbjct: 400 PWEAEVDGWRVLGTGGQNVDDVFKYVDSEDRLGMMEAMCRWRCCAPTAPDTLWSYPFQDD 459
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
DP ++++CP +YF GNQ +F T+ I+ ++VRL++VP F +S+ + ++++ TLE +
Sbjct: 460 DPFVLKACPHLYFVGNQPEFGTRVIDGPDGQSVRLVAVPSFAASKEIVLVDMETLEVTKV 519
Query: 319 VVE 321
+E
Sbjct: 520 KIE 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
++ T+ E K V + L+ E C + GT++ LKPNIL+++S++ L
Sbjct: 71 WDGTTVGGETAKKVDRV----LDVRQGELCWVAGTVYMDMALKPNILEDVSKDRWLSAPI 126
Query: 78 QHTHFVSD--SDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ SD SD++ LED+ R+ L G+I VTG ++A+ GT +G+F+V D+
Sbjct: 127 STQKYYSDDGSDQVTLEDDSGRVRLIGDILKTVPLVTGCIIAVMGTENTSGEFEVLDL 184
>gi|330923754|ref|XP_003300360.1| hypothetical protein PTT_11594 [Pyrenophora teres f. teres 0-1]
gi|311325535|gb|EFQ91548.1| hypothetical protein PTT_11594 [Pyrenophora teres f. teres 0-1]
Length = 560
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 11/176 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-----------TFHPVTNPYIFEME 205
++ + ++PG DP+N LPQQPLHP LFP+ Y+ F VTNP+ +++
Sbjct: 318 TLPITMLPGTNDPSNVALPQQPLHPALFPKTRLYAEPPIESNESLNGFDAVTNPWTGDID 377
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++GT GQ VSD+ K+ P++ +E LR VAPTAPDTL CYPF D DP+++
Sbjct: 378 GYRVLGTGGQTVSDLLKYLKGVTPVEAMEKMLRWRCVAPTAPDTLWCYPFQDGDPLMMTE 437
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
CP +Y G Q KFE KTI + V L+SVP F +S + ++++ + + + V
Sbjct: 438 CPHIYIAGCQRKFEAKTITGPAGQKVLLVSVPKFSTSGKIVLVDMESWDVEVVQVR 493
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
+ E++ K+ V ++ D+ E C ++GT++ KPN+L +I ++ + P
Sbjct: 74 RGFELDDKKASFVERVLDVRRG--ELCWVVGTVYMEMAGKPNVLDDIEKDNWIADPPHRD 131
Query: 81 HFVSDS--DELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+VS S DE++LEDE R+ + G VTG ++A GT +G F V + YA
Sbjct: 132 TYVSASGGDEMMLEDESGRLRVSGEPLQGRVVTGCILAALGTEQDDGSFLVIAIQYA 188
>gi|169602154|ref|XP_001794499.1| hypothetical protein SNOG_03956 [Phaeosphaeria nodorum SN15]
gi|111068041|gb|EAT89161.1| hypothetical protein SNOG_03956 [Phaeosphaeria nodorum SN15]
Length = 499
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 11/169 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS--------TFHP---VTNPYIFEME 205
SI + L+PG DP+N LPQQPLHP LFP + Y+ T H VTNP+ ++E
Sbjct: 318 SIPITLLPGASDPSNVALPQQPLHPALFPRSRHYAEPPASGLDTLHGLDMVTNPWEGDVE 377
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++GTSGQ V+D+ K+ + I+E LR +APTAPDTL CYPF D+DP +++
Sbjct: 378 GYRILGTSGQNVADLFKYVEKVKTVQIMEMMLRWRCIAPTAPDTLWCYPFQDDDPFLVKE 437
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
CP +YF G Q KF + IE + V ++SVP F + V +++L + E
Sbjct: 438 CPHLYFVGCQKKFGKRIIEGPAGQKVLVVSVPRFSKRKQVVLVDLDSWE 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 23 IEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
E+ K+ V ++ D+ ++ E C ++GT+F +KPN+L +I++E + P+ T +
Sbjct: 76 FELGGAKAQFVERVLDVRQS--ELCWVVGTVFMDLAMKPNVLDDITKEHWIAAPPKRTTY 133
Query: 83 VSDSD--ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 129
+ + +++LEDE R+ + G+ + VTG V+A GT +G F+V
Sbjct: 134 LEPAKPADMMLEDESGRLRVTGDPLRAHFVTGCVLAALGTEQADGTFQV 182
>gi|50549919|ref|XP_502431.1| YALI0D05093p [Yarrowia lipolytica]
gi|49648299|emb|CAG80619.1| YALI0D05093p [Yarrowia lipolytica CLIB122]
Length = 469
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 112/172 (65%), Gaps = 9/172 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEM---EGKL-LM 210
SI VD+M G DP N +LPQQPLH +FP++ K+ +TF V+NPY ++ E L ++
Sbjct: 297 SISVDIMAGNDDPGNMSLPQQPLHLSMFPQSRKFKKATFGSVSNPYWWDFSTDEAPLKVL 356
Query: 211 GTSGQPVSDIAKF--SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPD 268
GTSGQ VSDI K+ + LDI+E+TL H+ PTAPDTL CYP+ D+DP II+ P
Sbjct: 357 GTSGQNVSDIYKYLIEGRDDILDIMEHTLAWRHLCPTAPDTLTCYPYGDDDPFIIKETPH 416
Query: 269 VYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
+YF GNQ +F+T ++ +VRL++VP F + V ++N+ TL+ L +
Sbjct: 417 LYFCGNQDEFQTSVVK-HDGVSVRLVAVPRFDETGEVVLVNMRTLKAEVLRI 467
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-----------SDSDELILEDELQR 97
++GTLFK + KP++L+E++ P + +V D + LED R
Sbjct: 77 VVGTLFKDMKYKPSMLEEVTRSHWGAPPGKKPKYVDPQGDCEDGGHKDDSSIQLEDSSGR 136
Query: 98 IPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT---PVFNPRTTLSNNEN 150
I L G + +TGVV + GT NG+F V DV + ++ P + +++ E+
Sbjct: 137 ITLVGPKVQEFMLITGVVCGVLGTAGENGRFTVVDVVWGGFPEQIYRPLSGVNDGED 193
>gi|388856329|emb|CCF50138.1| related to HYS2-DNA-directed DNA polymerase delta, 55 KD subunit
[Ustilago hordei]
Length = 514
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 14/199 (7%)
Query: 137 PVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPV 196
P F+ TL+ ++ S++ V L+PGE DPA+ +PQQP+H L P A ++ + H
Sbjct: 313 PTFSSAPTLALDQLLTDLCSAMPVHLLPGEKDPASVAIPQQPIHFALLPRAGRFDSLHRH 372
Query: 197 TNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYP 254
TNP + GK L+GT+GQ + DI K+ ++ L++ TL GH+APTAPDTL CYP
Sbjct: 373 TNPAWLRIGGKKLLGTAGQNIDDIFKYVQQADDGRLEMAARTLEWGHLAPTAPDTLWCYP 432
Query: 255 FYDNDPMIIESCPDVYFTGNQSKFETKTIEIE------------KDKNVRLISVPDFFSS 302
F DP +++ PDV F GNQ K+ + + +DK R++ +P F +
Sbjct: 433 FKSTDPFVLKERPDVMFVGNQPKYASAVYRYDDDEADENSQENAQDKGCRVVLIPQFAKT 492
Query: 303 RTVAILNLSTLECHSLVVE 321
+ V +LNL++LE + VE
Sbjct: 493 KQVVLLNLASLETKLVCVE 511
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDELILEDELQR 97
L+ E C ++G ++ LKP++L++++ E L PQP FV DEL +ED+ R
Sbjct: 106 LDIRQGEICYVVGNIYCAMPLKPDVLEDLTREQWLAPQPVRAKFVDYAKDELFIEDQSGR 165
Query: 98 IPL-----HGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
+ L G + +TGVV A+ GT G F V D +A+ + S + K
Sbjct: 166 VKLVGEAIRGGTALREMLITGVVAAVLGTETRAGDFDVVDAVFASLPSPAKAASSGRDGK 225
Query: 152 YVNHSS 157
S
Sbjct: 226 AKGESG 231
>gi|453082073|gb|EMF10121.1| DNA polymerase delta subunit 2 [Mycosphaerella populorum SO2202]
Length = 498
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------STFHPVTNPYIFEMEGK 207
SI + L+PG DP +T+LPQQP+H +FP Y F VTNP F+++G
Sbjct: 320 SIPITLLPGATDPTSTSLPQQPIHAAMFPHCRPYMPQAQDSTAGWFDSVTNPAEFDLDGF 379
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
+G GQ + D+ K+ + + L+++E LR APTAPDTL CYPF D D +++ CP
Sbjct: 380 RFLGGGGQTLDDVYKYLDGEDRLEMMESMLRWRLSAPTAPDTLPCYPFQDGDRFVMKECP 439
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLTEE 326
VYF GNQ +FET IE + + VR+++VP F + V +L+L L+ + E EE
Sbjct: 440 HVYFVGNQPRFETSVIEGPQGQKVRMVTVPSFSKTGEVVLLDLEDLKVEIIKFEAFEEE 498
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 60
+ E+ D G Q+K + +++ +G C ++GT++ LK
Sbjct: 69 LATEAFQDYEIGGEQAKRVDRVLDVRQGNL----------------CWVVGTIYMEMPLK 112
Query: 61 PNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKG 119
PN+L +I +E + P + +++LEDE R+ L G + VTG +VA+ G
Sbjct: 113 PNVLDDIGKEHWIAAPPAREKYNGGEGQVMLEDESGRLRLTGGFLGSVVLVTGAIVAVLG 172
Query: 120 TPVGNGKFKVSDV 132
T +G F+V DV
Sbjct: 173 TENSDGDFEVIDV 185
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+++ CP VYF GNQ +FET IE +G+ V ++ + ++T
Sbjct: 434 VMKECPHVYFVGNQPRFETSVIEGPQGQKVRMVTVPSFSKT 474
>gi|412985302|emb|CCO20327.1| predicted protein [Bathycoccus prasinos]
Length = 563
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 27/185 (14%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEM-----------EG 206
VDLMPG DP N+ LPQQP+H C P A+++ ST VTNP+ F++
Sbjct: 373 VDLMPGSSDPTNSALPQQPIHSCFLPNAARFEGSTLKKVTNPHEFQITPSSDDASTSSSS 432
Query: 207 KLLMGTSGQPVSDIAKFSN-------------LSNPLDILEYTLRCGHVAPTAPDTLACY 253
+ +GTSGQ V D + ++ LD++E L GH+AP+APDTLACY
Sbjct: 433 RTFLGTSGQNVRDCLQITSSGVGIKGKTPEEKAKAVLDVMERFLEWGHMAPSAPDTLACY 492
Query: 254 PFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
PF D DP +I PDV+F G QS F ++ I + K+V L+SVP F + +V +LNL TL
Sbjct: 493 PFKDRDPFVITQVPDVFFAGCQSAFGSREIVVASQKSV-LVSVPSFSETGSVVLLNLKTL 551
Query: 314 ECHSL 318
+ +
Sbjct: 552 KAEEV 556
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 45 EECVIIGTLFKHQQLKPNILKE-ISEELKLVPQPQHTHFVSDSDE---------LILEDE 94
EE VIIGT++K KP IL E I + + + Q H + D +E ILEDE
Sbjct: 145 EEVVIIGTIYKEMAKKPIILDEYIKTKAGVTKKEQVEHGLMDLEENFVDEEKDFCILEDE 204
Query: 95 LQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTT 144
R+ L G + + VTGV A KG NG F V V +A P + ++T
Sbjct: 205 SARVKLQGPGVKVGELVTGVSAACKGRVNNNGDFVVDSVAFAKPSSSAKST 255
>gi|302310769|ref|XP_455752.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425089|emb|CAG98460.2| KLLA0F14949p [Kluyveromyces lactis]
Length = 462
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 114/186 (61%), Gaps = 22/186 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-SKY------STFHPVTNPYIFEMEGKLL 209
S+ VDL+PGE DP++ +LPQQPLH LF +A S Y FH V+NPY F++EG L
Sbjct: 277 SLPVDLLPGENDPSDRSLPQQPLHKALFDDALSPYFDLENADIFHSVSNPYWFDIEGLQL 336
Query: 210 MGTSGQPVSDIAKF-------------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFY 256
+ TSGQ ++DI K+ + + LD+ E TL+ ++APTAPDTL CYP+
Sbjct: 337 LATSGQQINDITKYVIPFYEETKSLKGDTIDHRLDLAEATLKWQNIAPTAPDTLWCYPYS 396
Query: 257 DNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL--E 314
DNDP I++ P VY GNQ +F + ++E V ++SVP+F ++ +L+L +L E
Sbjct: 397 DNDPFILKEWPHVYIIGNQPEFGYRKTQLEGAVEVLIVSVPEFSTTGQYLVLDLDSLVPE 456
Query: 315 CHSLVV 320
H++ V
Sbjct: 457 VHTIAV 462
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV 74
QSK+ ++ ++ K V K+ D+ E C IGT++ Q KPNIL+EI ++
Sbjct: 67 QSKWNSE-FRLQGRKVVKKSKVLDIQAG--EPCWCIGTVYCEMQYKPNILQEIVDDTYGA 123
Query: 75 PQPQHTHFVSD-SDELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDV 132
P ++ + +DE++L+DE R+ L G + V+G VV I G G F+V D+
Sbjct: 124 PDLIKSYTDPEGTDEIMLDDESGRVILVGELVRKTPFVSGTVVGILGMEADAGTFQVLDI 183
Query: 133 CY 134
CY
Sbjct: 184 CY 185
>gi|346327140|gb|EGX96736.1| DNA polymerase delta subunit 2 [Cordyceps militaris CM01]
Length = 513
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 104/177 (58%), Gaps = 12/177 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST------------FHPVTNPYIFEM 204
S+ V L+PG DPAN + PQQPLH LFP A + F VTNP+ E+
Sbjct: 335 SLPVTLLPGARDPANASYPQQPLHTALFPSARAFGADPSAGAAAAPGWFDSVTNPWEAEV 394
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
EG ++GT GQ V D+ K+ + + L ++E R APTAPDTL YPF D+DP ++
Sbjct: 395 EGWRVLGTGGQNVDDVFKYVDSDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQDDDPFVLN 454
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+CP +YF GNQ F T+ I ++VRL++VP F S+ + ++++ TL+ + +E
Sbjct: 455 ACPHLYFVGNQPAFGTRLIHGPDGQSVRLVAVPSFAVSKEIVLVDMETLDVTKVKIE 511
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQ 96
L+ E C + GT++ LKPNIL+++S++ L + SD +D++ LED+
Sbjct: 88 LDVRQGELCWVAGTVYMDMALKPNILEDVSKDRWLSAPISTQKYYSDDGTDQVTLEDDSG 147
Query: 97 RIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
R+ L G++ VTG ++A+ GT +G+F+V D+ +
Sbjct: 148 RVRLVGDVLKTVPLVTGCIIAVMGTENTSGEFEVLDLKF 186
>gi|118399515|ref|XP_001032082.1| hypothetical protein TTHERM_00691170 [Tetrahymena thermophila]
gi|89286420|gb|EAR84419.1| hypothetical protein TTHERM_00691170 [Tetrahymena thermophila
SB210]
Length = 488
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 102/157 (64%), Gaps = 2/157 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+D+MPG+ DPA LPQQ L+ C F + T + V+NPY FE E ++G SGQ + D
Sbjct: 326 LDIMPGDKDPAQAFLPQQSLNKCYFASSKSIPTLNLVSNPYKFEQENIQILGVSGQSMLD 385
Query: 220 IAKFSNLSNP-LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
I K+SN S+ +DIL+ L H++PT+PDTL C+PF+++DP I++ P VYF+GN KF
Sbjct: 386 IKKYSNYSDQDIDILQSHLLWRHISPTSPDTLQCFPFHESDPFILDELPHVYFSGNSPKF 445
Query: 279 ETKTI-EIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
ETK + E K RLI VP +S + I+NL+ L+
Sbjct: 446 ETKMVYEENTKKRCRLICVPALSASNSFVIMNLANLD 482
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 22/94 (23%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN E V+I TL+K +LKPN+L V Q Q ++++D D + +ED+ R+
Sbjct: 85 LNIKVGEHQVVIATLYKDMKLKPNVLT--------VSQ-QRDNYMADDDVIYMEDQTGRM 135
Query: 99 PLHGN-------------IDIHNQVTGVVVAIKG 119
L N ID+ N +G+VV I+G
Sbjct: 136 QLAFNNTQFKSSISKPKTIDVKNLTSGLVVGIRG 169
>gi|449295481|gb|EMC91503.1| hypothetical protein BAUCODRAFT_79984 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY----------STFHPVTNPYIFEMEG 206
S+ V L+PGE DP +T+LPQ P+H +FP A Y S F TNP F ++G
Sbjct: 316 SMPVTLLPGEQDPTSTSLPQPPIHAAMFPHARAYMSLPQAREDASWFDSTTNPAEFNVDG 375
Query: 207 KLLMGTSGQPVSDIAKF-SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
+GT GQPV D+ K+ S+ L+++E LR APTAPDTL CYPF D D +++
Sbjct: 376 FRFLGTGGQPVDDVYKYISDCEERLEMMEAMLRWRLTAPTAPDTLWCYPFQDGDQFVMKE 435
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
CP ++F GNQ KFET IE + VRL++VP F + + I+++ TL
Sbjct: 436 CPHIFFVGNQPKFETAVIEGPVGQQVRLVAVPKFRDTGELVIVDVETL 483
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 24 EIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 83
E E ++ K L+ E C + GT++ LKPN+L++I +E + P +
Sbjct: 70 EFEIAGETALRKDRVLDVRQGELCWVAGTVYMEMPLKPNVLEDIGKEHWIAAPPPRIKYD 129
Query: 84 SDSD-ELILEDELQRIPLHGNIDIHN--QVTGVVVAIKGTPVGNGKFKVSDV 132
S ++LEDE R+ L G +H VTG +VA+ GT +G F+V D+
Sbjct: 130 SGIGLGIMLEDESGRLRLTGGF-LHECLLVTGAIVAVVGTENKDGDFEVLDL 180
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKP 61
+++ CP ++F GNQ KFET IE G+ V ++ + DT E VI+ + L P
Sbjct: 432 VMKECPHIFFVGNQPKFETAVIEGPVGQQVRLVAVPKFR--DTGELVIVDV----ETLVP 485
Query: 62 NILK-EISEE 70
++K EI EE
Sbjct: 486 EVVKFEIFEE 495
>gi|320590996|gb|EFX03435.1| DNA polymerase delta subunit [Grosmannia clavigera kw1407]
Length = 532
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 10/168 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST----------FHPVTNPYIFEMEG 206
S+ V LMPG DP+N ++PQQP+H +FP+A +ST VTNP+ E+ G
Sbjct: 355 SMPVTLMPGPDDPSNASIPQQPVHAAMFPQARAFSTANETAAEPGSLDAVTNPWEGEVAG 414
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
++GTSGQ + D+ ++ S+ L ++E T R APTAPDTL YPF ++DP ++++C
Sbjct: 415 WRILGTSGQTLDDMQRYVQSSDRLGMMEATCRWRCCAPTAPDTLWSYPFQEDDPFVMDAC 474
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
P VYF G+Q +F T+ I + VRL++VP F S +A+++ TLE
Sbjct: 475 PHVYFAGSQPEFGTRLISGPDGQEVRLVAVPSFSESPEIALVDTDTLE 522
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 29/147 (19%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 60
+ +E+ DV G K + +++ +G E C + GT++ K
Sbjct: 65 VAVEAFGDVIVAGEPPKQVDRVLDVRQG----------------EFCWVAGTVYMDMPFK 108
Query: 61 PNILKEISEELKLVPQPQHTHFV-SDSDE-----------LILEDELQRIPLHGN-IDIH 107
P+IL ++S++ L P ++ D D+ ++LEDE RI L G +
Sbjct: 109 PSILDDVSKDRLLSLPPDVKKYIPEDGDDDLLAEGRGSVSVMLEDESGRIRLVGKALRSV 168
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCY 134
VTG + A+ GT NG+ +V D+ +
Sbjct: 169 LLVTGCIAAVMGTENENGELEVLDIVF 195
>gi|358060202|dbj|GAA93956.1| hypothetical protein E5Q_00602 [Mixia osmundae IAM 14324]
Length = 601
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 108/191 (56%)
Query: 128 KVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA 187
K Y VF+P+ T + SI+VDLMPGE DP+ T+PQQPL L P+A
Sbjct: 408 KAKKYGYDAAVFSPKPTADMDAFLEDLLPSIDVDLMPGENDPSAPTMPQQPLIETLLPKA 467
Query: 188 SKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAP 247
+NP + G +L GTSGQ ++DI K+ + + L + T+ H+APT+P
Sbjct: 468 QSLGGCAMRSNPCWIDSGGAILFGTSGQNLNDIYKYISSDDRLTMAANTIEWSHIAPTSP 527
Query: 248 DTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAI 307
DTL YPF + DP I+ P +YF GNQ FET I + ++ +R++ VP F +A+
Sbjct: 528 DTLWTYPFSERDPFILPKTPHIYFVGNQPAFETCLITTDDEQKIRVVLVPAFSDKAEIAL 587
Query: 308 LNLSTLECHSL 318
+N +TLEC S+
Sbjct: 588 INTATLECQSM 598
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E C++ GT++ +LKP++L EI+ + + P + DE++LED RI L G
Sbjct: 213 ELCIVAGTIYVEMKLKPSVLDEIAIDYSIPAAPPRKYVTPGVDEVLLEDSSGRIRLIGTG 272
Query: 105 DIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATP 137
+ VTG++V++ G G F+V D+ + P
Sbjct: 273 IEQGKWALVTGIIVSVLGAETATGDFEVLDLIFPGP 308
>gi|19115318|ref|NP_594406.1| DNA polymerase delta small subunit Cdc1 [Schizosaccharomyces pombe
972h-]
gi|13431469|sp|P87324.1|DPOD2_SCHPO RecName: Full=DNA polymerase subunit delta-2
gi|2052244|emb|CAA73148.1| Cdc1 protein [Schizosaccharomyces pombe]
gi|2052246|emb|CAA73149.1| Cdc1 protein [Schizosaccharomyces pombe]
gi|2388945|emb|CAB11679.1| DNA polymerase delta small subunit Cdc1 [Schizosaccharomyces pombe]
Length = 462
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 3/191 (1%)
Query: 125 GKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLF 184
GK KV Y T +NP T + SSI+V LMPG +D ++T LPQQPLHP L
Sbjct: 253 GKKKVKRYGYDTSAYNPNPTFQLDNFLDQVCSSIDVTLMPGPYDYSSTILPQQPLHPALL 312
Query: 185 PEASKY--STFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHV 242
++ + S+ VTNP + ++ TSGQ ++D+ K+ + L +E TL H+
Sbjct: 313 TKSKVWLGSSLQTVTNPTWLSLGNHFVLATSGQNINDLRKYHPKKSSLQCMENTLLWNHI 372
Query: 243 APTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSS 302
PT+PDTL CYPF D D ++E PD+Y GNQ KF KT+ I + ++L+SVP+F +
Sbjct: 373 TPTSPDTLWCYPFTDKDTFVMEEMPDLYLCGNQPKFGCKTV-INEGNRIQLVSVPEFRKT 431
Query: 303 RTVAILNLSTL 313
+ ++N+ TL
Sbjct: 432 GVLVLINMHTL 442
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD------ELILEDELQRI 98
E+C ++ T + LKPN++ ++++ +V + + +VS D E LED+ RI
Sbjct: 68 EDCWVVATAYMTTALKPNVMNDVTQLHTIVTTTEESPYVSPEDAASGDIEYALEDDYGRI 127
Query: 99 PLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
G+ + VTGVV+A+ G G+F V DVC+
Sbjct: 128 DCSGSFLYDAGVVTGVVLAVLGHEDEQGRFVVVDVCF 164
>gi|440635650|gb|ELR05569.1| hypothetical protein GMDG_07489 [Geomyces destructans 20631-21]
Length = 516
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Query: 134 YATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST- 192
Y + +NP T ++ S+ V L+PG DPAN +LPQQP+H +FP+A Y +
Sbjct: 311 YDSSAYNPAPTAHLDDFLAALLPSVPVTLLPGASDPANASLPQQPVHSAMFPQARAYGSG 370
Query: 193 -----------FHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGH 241
F VTNP+ E+EG ++GT GQ V D+ K+ + L ++E R
Sbjct: 371 PPTDGEKKIGWFDAVTNPWEGEVEGWRVLGTGGQNVDDVFKYVEGDDRLGMMEAMCRWRC 430
Query: 242 VAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFS 301
APTAPDTL YP D+D +I+ CP +Y G+Q KF+T IE + VRLI+VP F
Sbjct: 431 CAPTAPDTLWSYPLQDDDSFVIKDCPHLYIVGSQPKFDTTVIEGSDGQMVRLIAVPRFSE 490
Query: 302 SRTVAILNLSTLECHSLVVE 321
+ + +++ TLE +V++
Sbjct: 491 TGELLLVDSETLEVERVVID 510
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEE--LKLVPQPQHTHFVSDSDELILEDELQ 96
L+ E C + GT++ LKPNIL +IS++ VP Q SD +LEDE
Sbjct: 89 LDVRQGELCWVTGTIYMDMALKPNILDDISKDHWTSAVPPRQKYKSSDGSDSTMLEDESG 148
Query: 97 RIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTT 144
R+ L G+ + VTG +V++ GT NG F+V D+ TP P+ T
Sbjct: 149 RVRLIGSRLADEMMVTGCIVSVMGTENANGDFEVIDI--RTPDLAPQPT 195
>gi|410083373|ref|XP_003959264.1| hypothetical protein KAFR_0J00610 [Kazachstania africana CBS 2517]
gi|372465855|emb|CCF60129.1| hypothetical protein KAFR_0J00610 [Kazachstania africana CBS 2517]
Length = 481
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 27/192 (14%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKLL 209
SI +D++PG DP++ TLPQQPLH LF + K Y+ VTNPY F+ G +
Sbjct: 289 SISIDILPGRNDPSDRTLPQQPLHKALFNGSIKKYIENVDYNILSLVTNPYQFDFNGWQM 348
Query: 210 MGTSGQPVSDIAKF--------------------SNLSNPLDILEYTLRCGHVAPTAPDT 249
+ TSGQ ++DI K+ +L N LD++E TL+ ++APTAPDT
Sbjct: 349 LATSGQSINDICKYIMPYKKQDTEDDEASDISSHDSLENRLDLMECTLKWQNIAPTAPDT 408
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILN 309
L CYP+ +NDP I++ P +Y GNQ +F ++ ++ +++ISVP+F + + +L+
Sbjct: 409 LWCYPYKNNDPFILKEWPHLYVIGNQPEFGSRETKMSNGAKIKIISVPEFSETGKIVLLD 468
Query: 310 LSTLECHSLVVE 321
+STLE + +E
Sbjct: 469 MSTLEVELVSIE 480
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGN 103
E C IGT++ + KPNIL+E+ + P ++ + SDE++LEDE R+ L G
Sbjct: 94 EPCWCIGTIYCEMKYKPNILEEVINDTYNAPDLAKSYTDPEGSDEIMLEDESGRVLLVG- 152
Query: 104 IDIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
D Q +TG VV + G G F+V D+CY +P+
Sbjct: 153 -DFIRQTPFITGAVVGLLGMEADAGTFQVLDICYPSPL 189
>gi|406606925|emb|CCH41647.1| DNA polymerase delta subunit 2 [Wickerhamomyces ciferrii]
Length = 453
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 7/172 (4%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEMEGKLLMGTS 213
SI +D+MPGE DPA T+LPQQPLH F ++ Y STF +TNP + + L+GTS
Sbjct: 281 SIPIDMMPGESDPAETSLPQQPLHKAFFQKSKAYLNTSTFRTITNPAWIQYDELRLLGTS 340
Query: 214 GQPVSDIAKF----SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDV 269
G+ ++DI K+ S + ++++E T+ ++ PTAPDTL CYP+ D DP + P V
Sbjct: 341 GENINDIYKYVVPNSVQDSRINMIEATMVWQNIIPTAPDTLWCYPYSDKDPFSLTETPHV 400
Query: 270 YFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
YF GNQ K+ETK ++++ V+LI++P F + IL+ TLE + ++
Sbjct: 401 YFVGNQPKYETKMLQLDNTTKVKLIAIPTFSETGQFVILDTDTLESEVITLD 452
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E ++GT+F + KPNIL E+S ++ T+ D D+++LEDE R+ L G++
Sbjct: 90 EPSWVVGTIFCDMKYKPNILDEVSSGIQGADTSIKTYTDPDLDQIMLEDESGRVALEGDL 149
Query: 105 DIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCY 134
+ N VTG VV I G G F+V D+ Y
Sbjct: 150 -VKNTILVTGTVVGILGMESRPGVFQVVDIVY 180
>gi|402081179|gb|EJT76324.1| DNA polymerase delta small subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 510
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 9/167 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLF---------PEASKYSTFHPVTNPYIFEMEGK 207
S+ + +MPG+ DPAN +LPQQP+HP ++ P + VTNP+ E++G
Sbjct: 335 SMPITIMPGQHDPANASLPQQPVHPAMYDKSRAFIAAPGGADPGWLDSVTNPWEGEVDGW 394
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
+G SGQ V D+ K+ + + L ++E R APTAPDTL YPF DNDP I+ CP
Sbjct: 395 RFLGASGQNVDDVFKYVSSDDRLGMMELMCRWRCTAPTAPDTLWSYPFQDNDPFIMNQCP 454
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+YF G+Q +F TKTI + ++VRL++VP F SR + +++ TL+
Sbjct: 455 HLYFVGSQPEFGTKTITGPEGQSVRLVTVPTFSKSREIVLVDTETLD 501
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQ 96
L+ E C + GT++ LKPNIL++++++ + P ++S+ D ++LED+
Sbjct: 90 LDVRQGELCWVTGTVYMDMPLKPNILEDVAKDRWISAPPTAQKYISEDGQDSIMLEDDSG 149
Query: 97 RIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP-RTTLSN 147
R+ L G++ + VTG ++A+ GT +G F+V DV Y P R LSN
Sbjct: 150 RVRLVGDVLEGAILVTGCIIAVMGTENADGDFEVIDVRYPDLAPQPDRWALSN 202
>gi|398395611|ref|XP_003851264.1| hypothetical protein MYCGRDRAFT_45479 [Zymoseptoria tritici IPO323]
gi|339471143|gb|EGP86240.1| hypothetical protein MYCGRDRAFT_45479 [Zymoseptoria tritici IPO323]
Length = 502
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 14/178 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPV-------------TNPYIFE 203
SI + L+PG+ DP +T LPQ P+H +FP + Y T HPV TNP F+
Sbjct: 321 SIPITLLPGQSDPTSTALPQHPIHAAMFPHSRAY-TEHPVPGQTHLPNWFDSTTNPAEFD 379
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
++G +G GQ V D+ ++ + L+++E +R APTAPDTL C+PF D D ++
Sbjct: 380 VDGWRFLGAGGQTVDDVYRYVSGEERLEMMEAMMRWRLTAPTAPDTLWCFPFQDGDRFVM 439
Query: 264 ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+ CP VYF GNQ KFET IE + VRL++VP F + + +L++ TL+ + E
Sbjct: 440 KECPHVYFVGNQPKFETSVIEGPHGQKVRLVAVPKFKETGEIVLLDMETLDAEVVKFE 497
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-SDSD-ELILEDELQRIPLHGN- 103
C I+GT++ LKPN+L +I +E + P + D+D ++LEDE R+ L G
Sbjct: 98 CWIVGTIYMEMPLKPNVLDDIGKEHWIAAPPAREKYADGDADIPMMLEDESGRLRLTGGF 157
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ VTG +VA+ GT +G F+V D+
Sbjct: 158 LRSVLLVTGAIVAVMGTENSDGDFEVLDI 186
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+++ CP VYF GNQ KFET IE G+ V ++ + ET
Sbjct: 438 VMKECPHVYFVGNQPKFETSVIEGPHGQKVRLVAVPKFKET 478
>gi|255711228|ref|XP_002551897.1| KLTH0B02464p [Lachancea thermotolerans]
gi|238933275|emb|CAR21459.1| KLTH0B02464p [Lachancea thermotolerans CBS 6340]
Length = 486
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 22/188 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFP-------EASKYSTFHPVTNPYIFEMEGKLL 209
S+ +DLMPG D ++ +LPQQPLH LF E S F P TNP F++ G L
Sbjct: 300 SMPIDLMPGPRDLSDQSLPQQPLHKALFGPMISPFFEESNKELFCPTTNPAWFQLNGVQL 359
Query: 210 MGTSGQPVSDIAKF--------------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPF 255
+GTSGQ + D+ K+ +N++ +DI+E LR ++APTAPDTL CYP+
Sbjct: 360 LGTSGQNIDDMCKYVLPFEPDSQENLAEANIATRMDIIEGCLRWQNIAPTAPDTLWCYPY 419
Query: 256 YDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
D DP +++ P V+F GNQ +F +K +++E V+ I+VP+F + V IL+L TL+
Sbjct: 420 KDEDPFVLKKWPHVFFVGNQPQFASKDVQLEGGVKVKAIAVPEFSKTGQVVILDLETLDT 479
Query: 316 HSLVVEDL 323
+LV D+
Sbjct: 480 -TLVTIDM 486
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGN 103
E C +GT++ + KPNIL+E+ ++ P + D +DE++LEDE R+ L G
Sbjct: 117 EPCWCVGTIYCEMKYKPNILEEVVNDVYGAPDLVKGYLDEDGTDEVMLEDESGRVLLVGE 176
Query: 104 I-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
+ V+G VV I G G F+V D+C+ + + P+T L
Sbjct: 177 LAKTKPLVSGTVVGILGMEADAGTFQVLDICFPSAL--PQTEL 217
>gi|324511905|gb|ADY44945.1| DNA polymerase delta small subunit [Ascaris suum]
Length = 451
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEMEGKLLMGTSG 214
S +EVD+MPG DPA +PQQP+H +FP AS + + VTNPY F + G +MGTSG
Sbjct: 277 SLLEVDVMPGLGDPATHLMPQQPIHRAVFPNASYHGKMLNLVTNPYYFTLNGIHIMGTSG 336
Query: 215 QPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC-PDVYFTG 273
VSD+ +FS ++ DILE L H+APT PDT+ +PF D DP IIE P + F
Sbjct: 337 NNVSDLKRFSTKASSTDILERILLWQHLAPTVPDTVDGFPFIDRDPFIIEDAFPHILFAA 396
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
NQS E+ E E + L+SVP F +++ ++NL TLE
Sbjct: 397 NQSVAESAVREFEGGRRTLLVSVPSFAKTKSALLVNLRTLEV 438
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNIDIH 107
+IGT+ K +L+P++L++++EE ++P+P V+D D L EDE Q + L G ID+
Sbjct: 77 VIGTVEKRIKLRPSVLRDLAEEQLILPKPILEDRLVTDEDFLEFEDENQIVHLTGAIDMD 136
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP 141
+ TG V+ ++GT + + F+V ++ + P
Sbjct: 137 DVATGCVIGLRGTQLRDDIFRVDEIIWPKMAIQP 170
>gi|358389752|gb|EHK27344.1| hypothetical protein TRIVIDRAFT_73251 [Trichoderma virens Gv29-8]
Length = 503
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 12/176 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------STFHP-----VTNPYIFEM 204
SI V L+PG DPAN + PQQP+H +FP + Y ST P VTNP+ E+
Sbjct: 325 SIPVTLLPGAQDPANASYPQQPIHTAMFPLSRAYASDPGAASTSQPGWLDTVTNPWEAEV 384
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
EG ++GT GQ V D+ K+ + L ++E R APTAPDTL YPF ++DP +++
Sbjct: 385 EGWRILGTGGQNVDDVFKYVESDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQEDDPFVLK 444
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
SCP VYF G Q +F TK I +D+ VRLI+VP F ++ +++ TLE + +
Sbjct: 445 SCPHVYFVGCQPEFATKVIHGPEDQAVRLIAVPSFSKTKEFVLMDTETLEVTKIKI 500
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSD-SDELILEDELQ 96
L+ E C + GT++ +LKPNIL+++S++ L P ++ D SD+++LED+
Sbjct: 86 LDVRQGELCWVAGTVYMDMKLKPNILEDVSKDQWLSAPMSSQKYYSDDGSDQIMLEDDSG 145
Query: 97 RIPLHGNIDIHNQ---VTGVVVAIKGTPVGNGKFKVSDV 132
R+ L G D+ N VTG +VA+ GT NG+F+V D+
Sbjct: 146 RVRLVG--DLLNSIPLVTGCIVAVMGTENTNGEFEVIDL 182
>gi|429852039|gb|ELA27194.1| DNA polymerase delta subunit [Colletotrichum gloeosporioides Nara
gc5]
Length = 417
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 9/207 (4%)
Query: 123 GNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPC 182
GN K V Y +NP + +E S+ V LMPG DPAN + PQQP+H
Sbjct: 207 GNKKATVKKYGYDASAYNPLPSQLFDEFLADLLPSMPVTLMPGAQDPANASYPQQPIHSA 266
Query: 183 LFPEASKYST---------FHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDIL 233
+FP A Y+ F TNP+ E++G ++GT GQ V D+ K+ + + L ++
Sbjct: 267 MFPRARPYAAGPDAKEAGWFDTTTNPWEAEVDGWRMLGTGGQNVDDVFKYVDSDDRLGMM 326
Query: 234 EYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRL 293
E R APTAPDTL YPF DNDP +++ P V+F G Q +F T+ I+ + RL
Sbjct: 327 EAMCRWRCSAPTAPDTLWAYPFQDNDPFVMKEAPHVFFVGCQPEFGTRVIQGADGQTTRL 386
Query: 294 ISVPDFFSSRTVAILNLSTLECHSLVV 320
I+VP F ++ + +++ TLE + +
Sbjct: 387 ITVPSFSETKEIVLVDTETLEVSKVKI 413
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSD---SDELILEDELQRIPL 100
E C + GT++ LKPNIL+++S++ + + P T + SD ++++LED+ RI L
Sbjct: 7 ELCWVTGTVYMDMPLKPNILEDVSKD-RWISAPISTDRYYSDDVEKNQIMLEDDSGRIRL 65
Query: 101 HGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
G++ IH VTG ++ + GT +G+ +V DV +
Sbjct: 66 VGDVLKSIH-LVTGCIIGVMGTENASGELEVIDVKF 100
>gi|358401336|gb|EHK50642.1| hypothetical protein TRIATDRAFT_297022 [Trichoderma atroviride IMI
206040]
Length = 404
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 12/170 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST------------FHPVTNPYIFEM 204
SI V L+PG DPAN + PQQP+H +FP + Y+ F PVTNP+ E+
Sbjct: 226 SIPVTLLPGAQDPANASYPQQPVHSAMFPLSRAYAAELGAKAASQPGWFDPVTNPWEAEV 285
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
EG ++GT GQ V D+ K+ + L ++E R APTAPDTL YPF ++DP +++
Sbjct: 286 EGWRILGTGGQNVDDVFKYVESDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQEDDPFVLK 345
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+CP VYF G Q +F T+ I ++VRLI+VP F ++ +++ TLE
Sbjct: 346 TCPHVYFVGCQPEFATRVIHGPDGQSVRLIAVPSFSKTKEFVLMDTETLE 395
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 58 QLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQRIPLHGNIDIHN--QVTGV 113
+LKPNIL+++S++ L + SD SD+++LED+ R+ L G++ ++N VTG
Sbjct: 4 RLKPNILEDVSKDRWLSAPISSQKYYSDDGSDQIMLEDDSGRVRLVGDV-LNNIPLVTGC 62
Query: 114 VVAIKGTPVGNGKFKVSDV 132
++A+ GT NG+F+V D+
Sbjct: 63 IIAVMGTENTNGEFEVIDL 81
>gi|296421699|ref|XP_002840402.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636617|emb|CAZ84593.1| unnamed protein product [Tuber melanosporum]
Length = 430
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 6/208 (2%)
Query: 114 VVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTT 173
VVA+ P G+ K Y + +N L+ + S+ V ++PG DPAN +
Sbjct: 214 VVAL---PPVKGEEKHKKYGYDSTTYNANPVLALDNLLTTLLPSLPVTILPGPTDPANVS 270
Query: 174 LPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLD 231
LPQ+PLHP +F A Y S+ H TNP +++G +GT+GQ + D+ K+ + L
Sbjct: 271 LPQKPLHPAIFRNAKHYAASSLHTATNPCCVDIDGLKFLGTAGQNLDDVYKYVEGEDRLG 330
Query: 232 ILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIE-KDKN 290
+ E LR VAPTAPDTL +PF D D +I+ CP V+F GNQ +F ++ +E+ +++
Sbjct: 331 MCERLLRWRCVAPTAPDTLWSFPFEDKDMYVIKECPHVFFIGNQEEFASRLVEVGPQNQL 390
Query: 291 VRLISVPDFFSSRTVAILNLSTLECHSL 318
R+I VP F + V +L+L TLEC S+
Sbjct: 391 CRIILVPKFSETNEVVLLDLDTLECESV 418
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGN 103
E C I+GT++ LKPNIL++I+++ + P P+ + +D+ +LEDE R+ L G
Sbjct: 44 ELCWIVGTIYMEMPLKPNILEDITKDQWIAAPPPRDKYVTPGADQTMLEDESGRLRLVGR 103
>gi|399218766|emb|CCF75653.1| unnamed protein product [Babesia microti strain RI]
Length = 443
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 168/382 (43%), Gaps = 103/382 (26%)
Query: 39 LNETDT-EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 97
L + DT CVII +FK + P+ L E + ++ + ++S+ D + LED R
Sbjct: 65 LKDVDTVNSCVIIAAIFKEMKNCPSALDEYTGKMY---KRDLNSYISEDDIVYLEDYTSR 121
Query: 98 IPLHGN-IDIHNQVTGVVV----------------AIKGTPVG------NGKFK------ 128
I L GN I++ + V+G+++ A+ G P+ N F+
Sbjct: 122 IVLGGNKINVQSFVSGLIIAVLGKLEDGKFIVEDLALPGPPINMYKPLPNNNFQGYLAII 181
Query: 129 ---------------------VSDVCYATPVFNPRTTLSNNENKYVNH------------ 155
+ VC T + L N + N+
Sbjct: 182 SGLELSAENSCYNTLQMLRDIILGVCGPTEIMKNVVRLVIAGNTFKNYKFDVDLLKKADT 241
Query: 156 ------SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLL 209
+SI +D+MPG DP N LPQQP+HP LF +S+ +TF TNPY FE+EG
Sbjct: 242 FLAQIAASIHIDIMPGLNDPTNLNLPQQPIHPYLFEHSSRLNTFRSTTNPYTFEIEGIRF 301
Query: 210 MGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII------ 263
+GTSG+ V I SNLS+ L+ L+ + +APTA DTL CYPF NDP+ I
Sbjct: 302 LGTSGENVKMIKMSSNLSD-LESLQLAINSRCIAPTAGDTLGCYPFKQNDPLNICLPMHK 360
Query: 264 -ESCPDVYFTGNQSKFETKTI-------------EIE----------KDKNVRLISVPDF 299
E P V F GN K+ T + E+ K NVRL+ VP F
Sbjct: 361 DEEFPHVIFAGNCDKYATGLLCDSDSLLSTRASNEVTNHISKNTFDFKQANVRLVCVPKF 420
Query: 300 FSSRTVAILNLSTLECHSLVVE 321
++ ++ ++TLE +++E
Sbjct: 421 VDKPSITLVKIATLETSQILIE 442
>gi|164663043|ref|XP_001732643.1| hypothetical protein MGL_0418 [Malassezia globosa CBS 7966]
gi|159106546|gb|EDP45429.1| hypothetical protein MGL_0418 [Malassezia globosa CBS 7966]
Length = 192
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
V +MPG DP TLPQQPL L P AS+ ++ H TNP F + G+ ++ TSGQ + D
Sbjct: 23 VVVMPGMHDPCTLTLPQQPLLRTLLPRASQRTSLHLSTNPTWFSLNGRAILATSGQNLDD 82
Query: 220 IAKF------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ K+ + S LD+ TLR H+APTAPDTL CYPF D +I + PDVY G
Sbjct: 83 LLKYMPDDAKRDSSAALDMAVATLRWSHMAPTAPDTLWCYPFKAADAFVIRATPDVYVIG 142
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
NQ+ F T T + VR+I VP F S+ V +L+ TLE H
Sbjct: 143 NQAAFATTTFQASPTHQVRVILVPTFASTHQVVVLDTETLEPH 185
>gi|402224606|gb|EJU04668.1| hypothetical protein DACRYDRAFT_93140 [Dacryopinax sp. DJM-731 SS1]
Length = 418
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 105/187 (56%)
Query: 134 YATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTF 193
Y + ++ TL+ + + ++ V LMPG DPA TLPQQ L +F E + S F
Sbjct: 218 YDSSSYSATPTLTLSSHLLDLSRTMPVHLMPGASDPAGATLPQQALPKAMFGEVRRASGF 277
Query: 194 HPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACY 253
TNP +EG L++G GQ + DI K+ + S+ L++ TL H+APTAPDTL C+
Sbjct: 278 SCETNPCWIPLEGCLMLGVGGQTIDDIFKYVDSSDRLEMARSTLLWRHIAPTAPDTLWCH 337
Query: 254 PFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
PF D DP II PDVYF GNQ FET + + + R+I +P F + +++ TL
Sbjct: 338 PFADKDPFIIPRTPDVYFVGNQPAFETGMVRGVEGQRSRVILLPRFSKTGKFVLVHTGTL 397
Query: 314 ECHSLVV 320
E +L +
Sbjct: 398 EVKTLTI 404
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
L+ E C IIGT++ LKPN+L++IS++ + P S D ++LEDE R+
Sbjct: 28 LDVQKGELCFIIGTIYMDMPLKPNVLEDISKDHWIAAPPPRPKIFSPDDSVMLEDESGRV 87
Query: 99 PLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
L G + + VTGV++ G G F+V DVC+A
Sbjct: 88 RLVGERVSKAHLVTGVIMGALGAETAKGDFEVVDVCFA 125
>gi|452837166|gb|EME39108.1| hypothetical protein DOTSEDRAFT_159262 [Dothistroma septosporum
NZE10]
Length = 504
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY------------STFHPVTNPYIFEM 204
SI V L+PG DP +T+LPQQP+H +FP + Y + F +TNP F++
Sbjct: 319 SIPVTLLPGATDPTSTSLPQQPIHAAMFPHSRTYMDSIAPTSSCTPNWFDSITNPGEFDL 378
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
+G +G GQ + D+ K+ + L+++E LR APTAPDTL C+PF D D +++
Sbjct: 379 DGWRFLGAGGQTLDDVYKYVHGEERLEMMESMLRWRLTAPTAPDTLPCFPFQDGDKFVLK 438
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
P VYF GNQ KFET IE + VRL++VP F + V +++L TL + +E
Sbjct: 439 ESPHVYFVGNQPKFETSEIEGPHGETVRLVAVPSFRKTGQVVLIDLETLVPEVITIE 495
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS--DSDELILEDELQRIPL-HGN 103
C ++GT + LKPN+L +I +E + P + S + +LEDE R+ L G+
Sbjct: 96 CWVVGTCYMELPLKPNVLDDIGKEHWISAPPNREKYASANGQESFMLEDESGRLKLTGGS 155
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ VTG ++A+ GT +G F+V D+
Sbjct: 156 LQGFLLVTGAIIAVMGTENSDGDFEVLDL 184
>gi|380483266|emb|CCF40727.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 504
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 9/196 (4%)
Query: 134 YATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--- 190
Y +NP + ++ SI V L+PG DPAN + PQQP+HP +FP + Y
Sbjct: 301 YDASAYNPLPSQLLDDFLADLLPSIPVTLIPGAEDPANASYPQQPIHPAMFPRSRPYCAA 360
Query: 191 ------STFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAP 244
TNP+ E++G ++GT GQ V D+ K+ + + L ++E R AP
Sbjct: 361 PGAKETGWLDTTTNPWEAEVDGWRVLGTGGQNVDDVFKYVDSDDRLGMMEAMCRWRCSAP 420
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRT 304
TAPDTL YPF D+DP +++ P +YF G Q +F TK I+ + + VRLI+VP F S+
Sbjct: 421 TAPDTLWAYPFQDDDPFVMKEAPHLYFVGCQPEFSTKVIQGDNGQQVRLITVPSFAESKE 480
Query: 305 VAILNLSTLECHSLVV 320
+ +++ TLE + +
Sbjct: 481 LVLVDTETLEVSKVKI 496
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVS---DSDELILEDE 94
L+ E C + GT++ LKPNIL+++S++ + + P T + S D D ++LED+
Sbjct: 89 LDVRQGELCWVTGTVYIDMALKPNILEDVSKD-RWISAPISTDRYYSNEDDKDMIMLEDD 147
Query: 95 LQRIPLHGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP-RTTLSNNENK 151
RI L G++ IH VTG ++ + G+ NG+ +V DV + P R TL+++ ++
Sbjct: 148 SGRIRLVGDVLKSIH-LVTGTIIGVLGSENANGELEVIDVKFPDLAPQPSRWTLTDSPSE 206
Query: 152 YVNHSS 157
N S
Sbjct: 207 DHNMSG 212
>gi|195169613|ref|XP_002025615.1| GL20742 [Drosophila persimilis]
gi|194109108|gb|EDW31151.1| GL20742 [Drosophila persimilis]
Length = 227
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 114/220 (51%), Gaps = 25/220 (11%)
Query: 110 VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS---------NNENKYVNH----- 155
TG+V A+ G G F V D + N R + S + V H
Sbjct: 8 ATGIVCAVLGGTDSEGFFNVEDYWPNGSLGNGRDSKSLVRLIIAGNSVRGSAVAHVLTLQ 67
Query: 156 ---------SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEG 206
+ +D+MPG +DP N LPQQP H C+FP+A++ ++F VT Y ++
Sbjct: 68 LDSWFASWAQCLPIDVMPGAYDPVNFMLPQQPFHKCMFPQAAQLTSFQAVT--YNCRLDD 125
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
L++GT+GQ V+D+ + +++ + L+ L TL GHVAPT+PDTLACYP+ + DP I+ C
Sbjct: 126 ALIVGTAGQNVADLLRITSMESSLEALRCTLTWGHVAPTSPDTLACYPYIERDPFIMREC 185
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
P V F GN ET + K L+ VP F ++ V+
Sbjct: 186 PHVCFAGNCESLETALHVTSERKRTCLVCVPSFGKTKRVS 225
>gi|320583347|gb|EFW97562.1| DNA polymerase III (delta) subunit [Ogataea parapolymorpha DL-1]
Length = 488
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 27/192 (14%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ V +MPG+ DP +LP+QPLHP F +A Y+ F TNP E++G L+GTSG+
Sbjct: 295 NSVPVTIMPGDSDPCEVSLPKQPLHPSFFAKAGSYANFVRSTNPVWLEIDGVRLLGTSGE 354
Query: 216 PVSDIAKF-------------SNLSNP----------LDILEYTLRCGHVAPTAPDTLAC 252
++D+ K+ S + +P L +LE T+ +V PTAPDTL C
Sbjct: 355 NINDMFKYFIPNIQVDLNGEGSGMDSPVRNEIVNESRLKLLEATMHWQNVVPTAPDTLTC 414
Query: 253 YPFYDNDPMIIESCPDVYFTGNQSKFETK--TIEIEKDK--NVRLISVPDFFSSRTVAIL 308
YP+ +DP ++ P VYF GNQ KFET T+ +D +VR+++VPDF + +A+L
Sbjct: 415 YPYDVDDPFTLDETPHVYFVGNQPKFETAEMTLHCARDAPIHVRIVAVPDFCETGQMAVL 474
Query: 309 NLSTLECHSLVV 320
+L +L+C ++ +
Sbjct: 475 DLDSLQCEAIKI 486
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 47 CVIIGTLFKHQQLKPNILKEISE------------ELKLVPQPQHTHFVS-DSDELILED 93
C IGT+F + KPNIL+E+S EL + Q + T + +D+++LED
Sbjct: 84 CYTIGTVFMDMKYKPNILEEVSNNVYGANDVQESAELSKLDQLRATAYSDPQNDQVMLED 143
Query: 94 ELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
E R+ L G I D VTG VV + G V G F V DV Y P
Sbjct: 144 ESGRMILDGEILDKILLVTGAVVGVLGMEVEAGIFTVVDVVYPEP 188
>gi|270011510|gb|EFA07958.1| hypothetical protein TcasGA2_TC005539 [Tribolium castaneum]
Length = 295
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 137/258 (53%), Gaps = 38/258 (14%)
Query: 23 IEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
I + G + KL L+E + +CV+IGTLFK+Q+LKP+ILK+++EE +LVPQP THF
Sbjct: 46 IAKKWGTQYPICKLHKLSEENHPKCVVIGTLFKNQKLKPSILKQLAEEDQLVPQPIVTHF 105
Query: 83 VSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR 142
SDEL +EDELQR + I VTG+ A+ GT G+F V D +A F P+
Sbjct: 106 TDKSDELFIEDELQRYLIISCIPCDYLVTGISCALLGTADDKGRFIVEDYTFAD--FRPQ 163
Query: 143 TTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFP------------EASKY 190
+ + S V + G D N+ PQ L+ LF ASK
Sbjct: 164 IP------RPLLDDSAFVIFLSG-LDLVNS--PQCDLNLQLFTFWLSGLCDVAPFRASKI 214
Query: 191 S---------------TFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEY 235
+ + + V+NPY + + G ++GTSGQPV D+ ++ +++PL++LE
Sbjct: 215 TRVIIAGNSIRNTPEQSVNQVSNPYFYSLGGVRILGTSGQPVRDVMRYCEITDPLEVLEN 274
Query: 236 TLRCGHVAPTAPDTLACY 253
L+ GH+APTAP +
Sbjct: 275 CLKWGHLAPTAPRYFGVF 292
>gi|367025627|ref|XP_003662098.1| hypothetical protein MYCTH_2302249 [Myceliophthora thermophila ATCC
42464]
gi|347009366|gb|AEO56853.1| hypothetical protein MYCTH_2302249 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 12/176 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST------------FHPVTNPYIFEM 204
+I V L+PG DPAN + PQQP+H + P A Y++ PVTNP+ E+
Sbjct: 324 TIPVTLLPGAHDPANASYPQQPIHSAMLPTARTYTSPPGQSREEQPGWLDPVTNPWEGEI 383
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
EG ++GTSGQ + DI K+ + S+ L ++E R APTAPDTL YPF +++P +++
Sbjct: 384 EGWRVLGTSGQNLDDICKYVDNSDRLGMMEAMCRWRCSAPTAPDTLWAYPFQEDEPFVMK 443
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
CP +YF G Q +F TK IE + + VRL+ VP F +++ + +++ TL+ + +
Sbjct: 444 ECPHLYFVGCQPEFGTKVIEGPQGQMVRLVLVPSFAATKEIVLIDTETLDVSKVKI 499
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDELQRIPLHGNI 104
C + GT++ LKP++L++++++ + H+ S++ + ++LED+ RI L G++
Sbjct: 97 CWVAGTIYMDMPLKPSVLEDVAKDRWISAPTTADHYYSEAGGESIMLEDDSGRIRLVGDV 156
Query: 105 -DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ VTG ++A+ GT NG+F+V D+ +A
Sbjct: 157 LKSYFLVTGCIIAVMGTENVNGEFEVIDLKFA 188
>gi|260948094|ref|XP_002618344.1| hypothetical protein CLUG_01803 [Clavispora lusitaniae ATCC 42720]
gi|238848216|gb|EEQ37680.1| hypothetical protein CLUG_01803 [Clavispora lusitaniae ATCC 42720]
Length = 540
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 28/227 (12%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNH---------SSI 158
Q++ +++A G V K VSD + + S V+H +S+
Sbjct: 316 RQISRLIIA--GDSVSESKPVVSDTSFGS------KNTSRFSGSAVSHFSTWLAQIATSL 367
Query: 159 EVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-----FHPVTNPYIFEME-GKLLMGT 212
V +MPG+ DPA T LPQQP+H L + ++S H TNP E++ G ++GT
Sbjct: 368 PVTIMPGQSDPAETCLPQQPIHRALLGASGRFSGGPESLVHAATNPAWIELDTGARVLGT 427
Query: 213 SGQPVSDIAKFS----NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPD 268
+GQ +SDI K+S +L L ++E TLR H+APTAPDTL CYP+ + DP ++ P
Sbjct: 428 AGQNISDILKYSPGTPSLDQILTVMERTLRWQHIAPTAPDTLFCYPYEECDPFALDETPH 487
Query: 269 VYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
VYF GNQ + + +++ +K V++ISVP F S+ + +++++TLE
Sbjct: 488 VYFAGNQMEAGWRDVDVSGNK-VKVISVPRFCESKQIVLVDVATLEA 533
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDELILEDELQR 97
L+ E C + GT+F + K NIL ++ + + ++P T+ D L+LED+ R
Sbjct: 162 LDIASGELCWVSGTVFADSRKKLNILNDVEKGIDDVMPASPPTYVDPDDGLLMLEDDSGR 221
Query: 98 IPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS--NNENKYV 153
LH + + N VTG VA+ G + G F+ ++ TP P+ L E +Y+
Sbjct: 222 AVLHNDELLQNSGLVTGCFVAVLGIEIQAGIFEAMEIICPTPA--PQRPLGELKPEKRYL 279
Query: 154 NHSSIEVDLMPGEFDPANTTLPQQPL 179
+I +M + +T L QQ L
Sbjct: 280 ---AIVSGIMFSDAGDLSTVLLQQWL 302
>gi|403166950|ref|XP_003326790.2| hypothetical protein PGTG_08327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166794|gb|EFP82371.2| hypothetical protein PGTG_08327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 550
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 128/246 (52%), Gaps = 17/246 (6%)
Query: 83 VSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGK--FKVSDVCYATPVFN 140
+ +E L + R+ + GN+ V ++ PV N K K+ Y +
Sbjct: 217 IGGDEERRLARSVGRLVIAGNLT-------RVPSVNEPPVQNSKEATKLKRSAYEPAISA 269
Query: 141 PRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT--- 197
P T + ++ ++ + VDLMPG DP +LPQQ LH CLFP+A+ T HP+
Sbjct: 270 PPPT--DPADQLLSQLDLPVDLMPGPTDPTIQSLPQQALHRCLFPKATALRTAHPLNHGP 327
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
NP+ E+ G +GTSGQ + DI K+ + L + L H+APTAPDTL CYPF +
Sbjct: 328 NPWWAEIGGASFLGTSGQNLDDIYKYVVDEDRLSLATQMLEWSHIAPTAPDTLHCYPFRE 387
Query: 258 NDPMIIESCPDVYFTGNQSKFETKTIEI---EKDKNVRLISVPDFFSSRTVAILNLSTLE 314
DP ++ P VYF GNQ +F+T E E R+I +P F S T+ +++ +L
Sbjct: 388 RDPFVLSELPQVYFVGNQPEFKTHLQEYGPPENRSRTRIILLPRFSRSGTIVLVDPISLV 447
Query: 315 CHSLVV 320
C ++++
Sbjct: 448 CQTVLL 453
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 84
+E+ K+ + ++ D++ + V+IGTL+ +LKPN+L++++ E L P +VS
Sbjct: 54 LERWKAQTPCRVLDIDPSRI--SVVIGTLYCEMKLKPNVLEDLAREHHLGPALGPRKWVS 111
Query: 85 -DSDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR 142
D D ++LEDE R+ L G + + VTG++V + G G F+V D+ YA PR
Sbjct: 112 TDEDSIMLEDESGRVRLVGIDREKFTLVTGIIVGVMGRETSKGDFQVHDLIYAGVPDQPR 171
>gi|346976885|gb|EGY20337.1| DNA polymerase subunit delta-2 [Verticillium dahliae VdLs.17]
Length = 503
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 9/177 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------FHPVTNPYIFEMEGK 207
S+ + L+PG DPAN + PQQP+H +FP+A +S F TNP+ E++G
Sbjct: 327 SMPITLLPGAQDPANASYPQQPIHTAMFPKARPWSVHPDANEAGWFDNTTNPWEGEIDGW 386
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
++GT GQ V D+ K+ + + L ++E R APTAPDTL YPF D+DP +I+S P
Sbjct: 387 RVLGTGGQNVDDVFKYIDSEDRLGMMEAMCRWRCSAPTAPDTLWSYPFQDDDPFVIKSAP 446
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDLT 324
+YF G Q +F TK ++ + + +RLI+VP F ++ V +++ TLE + + T
Sbjct: 447 HLYFVGCQPEFSTKVVQGPEGQQIRLITVPSFSETKEVVLVDTETLEVSKVRISTAT 503
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT---HFVSDSDELILEDEL 95
L+ E C + GT++ +LKPNIL+++S++ + + P T + D D++++ED+
Sbjct: 87 LDVRQGELCWVAGTIYMEMRLKPNILEDVSKD-RWISAPISTEKYYSDDDQDQVMIEDDS 145
Query: 96 QRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
RI L G++ N VTG V+A+ G+ NG+ +V D+ +A
Sbjct: 146 GRIRLVGDVLKTVNLVTGCVIAVMGSENANGELEVIDIKFA 186
>gi|443894116|dbj|GAC71466.1| mitochondrial polypeptide chain release factor [Pseudozyma
antarctica T-34]
Length = 500
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 8/193 (4%)
Query: 137 PVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPV 196
P F+ TL+ ++ S++ V L+PGE DPA+ +PQQP+H L P A ++ + H
Sbjct: 305 PTFSSAPTLALDQLLSDLCSAMPVHLLPGERDPASVAIPQQPIHFALLPRAGRFDSLHRH 364
Query: 197 TNPYIFEMEGKLLMGTSGQPVSDIAKFSNL--SNPLDILEYTLRCGHVAPTAPDTLACYP 254
TNP + L+GTSGQ + DI K+ + S +D+ TL GH+APTAPDTL CYP
Sbjct: 365 TNPAWLSLGNLKLLGTSGQNIDDIFKYVDEPDSARIDMALRTLEWGHLAPTAPDTLWCYP 424
Query: 255 FYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKD------KNVRLISVPDFFSSRTVAIL 308
F DP +++ PDV F GNQ + + + D + R++ VP+F +R V +L
Sbjct: 425 FKSTDPFVLKDRPDVLFVGNQPSYASAMYTFDPDADDKAQQGCRVVLVPEFARTRQVVLL 484
Query: 309 NLSTLECHSLVVE 321
NL++L+ + ++
Sbjct: 485 NLASLDTKLVTID 497
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDELILEDELQRIPLHGNID 105
C ++G ++ LKP++L++++ E L PQP +V + DEL +ED+ R+ L G+
Sbjct: 113 CYVVGNIYCAMPLKPDVLEDLTREQWLAPQPVRAKYVDYEKDELFIEDQSGRVKLVGDAI 172
Query: 106 IHNQ------VTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLSNNE 149
+TGVV A+ GT G F V D +A+ PV P +S+ +
Sbjct: 173 RSGGPLRSMLITGVVAAVLGTETRTGNFDVVDAVFASLPVLQPAAPISHKK 223
>gi|308809712|ref|XP_003082165.1| DPOD2_ORYSA DNA polymerase delta small subunit (ISS) [Ostreococcus
tauri]
gi|116060633|emb|CAL57111.1| DPOD2_ORYSA DNA polymerase delta small subunit (ISS) [Ostreococcus
tauri]
Length = 453
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 17/177 (9%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHPVTNPYIFEMEGKLLMGTSG 214
S++ VD+M G+ DP N +PQQPLHP F EA+++ T TNP+ F ++ +GTSG
Sbjct: 273 SAVPVDVMSGKSDPTNKAMPQQPLHPVYFTEATRFEKTMRLATNPHEFSVDNISFLGTSG 332
Query: 215 QPVSDIAKFSNLSN---------------PLDILEYTLRCGHVAPTAPDTLACYPFYDND 259
Q V D+ FS + + L TLR HVAP+APDTLACYPF D D
Sbjct: 333 QNVDDVLTFSTIGADDVSSSFSGDDAAKPAVAALSQTLRWQHVAPSAPDTLACYPFKDRD 392
Query: 260 PMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
P +I++ P VYF G Q F + E+ + + ++SVP F ++ V ++++ TLEC
Sbjct: 393 PFVIDTIPRVYFAGCQEAFGADRVAHERGETL-VVSVPRFSTTGCVVLIDVRTLECR 448
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 45 EECVIIGTLFKHQQLKPNIL----KEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 100
E CV++GT++K + KP IL K+ E+ + + ++ + D L EDE R+ +
Sbjct: 70 EPCVVVGTVYKEMKDKPIILDEYVKDFEREVYEAKRIERGNYCREDDRLEFEDEGARVRV 129
Query: 101 HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR--TTLSNNENKYV 153
G +D VTGVV A KG G+F+V D P T ++ + KYV
Sbjct: 130 LG-VDAGRFVTGVVCAFKGRATSKGEFEVEDAAVFAPARGGEDAVTTADGDAKYV 183
>gi|302910988|ref|XP_003050394.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731331|gb|EEU44681.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 500
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST----------FHPVTNPYIFEMEG 206
SI V ++PG+ DPAN + PQQP+H +FP + Y+ F VTNP+ E+EG
Sbjct: 324 SIPVTMLPGDQDPANASYPQQPVHSAMFPNSRVYARDPSSPTKPGWFDTVTNPWEAEVEG 383
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
+GT GQ V D+ K+ + L ++E R APTAPDTL YPF ++DP ++++C
Sbjct: 384 WRFLGTGGQNVDDVFKYVGSDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQEDDPFVMKTC 443
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
P +YF G Q +F TK ++VRLI+VP F +++ + +++ TLE + +
Sbjct: 444 PHLYFAGCQPQFSTKVAHGPDGQSVRLITVPSFSTTKEIVLVDTETLEVERVKI 497
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDELQR 97
L+ E C + GT++ LKPNIL+++S++ + + P T + SD D+++LEDE R
Sbjct: 88 LDVRQGELCWVTGTVYMEMPLKPNILEDVSKD-RWISAPISTPKYFSDDDQVMLEDESGR 146
Query: 98 IPLHGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP-RTTLSNNENK 151
I L G++ +H VTG ++ + GT NG+ +V DV + P R +L+N K
Sbjct: 147 IRLVGDLLKSLH-LVTGCIIGVMGTENSNGELEVIDVKFPDLAPQPERWSLTNGTGK 202
>gi|294659973|ref|XP_462427.2| DEHA2G20350p [Debaryomyces hansenii CBS767]
gi|199434373|emb|CAG90937.2| DEHA2G20350p [Debaryomyces hansenii CBS767]
Length = 487
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 18/177 (10%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEME--GKLLMG 211
S+ + +MPG DPA LPQQPLH +F +Y ST +TNP E++ G L+G
Sbjct: 304 SVPISIMPGNNDPAEICLPQQPLHKSIFSSNKRYVGGSTLQTLTNPTWMEVQESGLRLLG 363
Query: 212 TSGQPVSDIAKF---SNLSNP---LDILEYTLRCGHVAPTAPDTLACYPFYDNDPM-IIE 264
TSGQ +SDI K+ L++P L I+E ++ ++ PTAPDTL CYPF + DP + +
Sbjct: 364 TSGQNISDILKYLTAETLTDPQVVLTIMESNIKWQNIIPTAPDTLYCYPFDNADPFTLAD 423
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKN------VRLISVPDFFSSRTVAILNLSTLEC 315
P VYF GNQ + TKTI ++KD + + LIS+PDF + + +L+L+TLEC
Sbjct: 424 ETPHVYFVGNQKSYHTKTINLQKDHDNHETAQITLISIPDFSQTGQIVLLDLTTLEC 480
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDELQRIPLHG 102
C + GT+F + K NIL+++ + ++P+ T+ +S+ E+ +LEDE R L+
Sbjct: 98 CWVSGTIFSDMKNKLNILQDVENGVDDVLPKVPETYTLSEVKEMPVVMLEDESGRAILNN 157
Query: 103 NIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
+ + VTG +VAI G + G F++ DV Y P +P+ L
Sbjct: 158 DDFLKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PSVSPQKPL 200
>gi|85101224|ref|XP_961110.1| hypothetical protein NCU03763 [Neurospora crassa OR74A]
gi|16944625|emb|CAC28660.2| related to DNA POLYMERASE DELTA SMALL SUBUNIT [Neurospora crassa]
gi|28922649|gb|EAA31874.1| hypothetical protein NCU03763 [Neurospora crassa OR74A]
Length = 525
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 20/213 (9%)
Query: 128 KVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA 187
++ Y + +NP + + ++ V L+PG DPAN + PQQP+HP +FP++
Sbjct: 310 QIKKYGYDSSSYNPVPSQLLDSFLSDLLPTMPVTLLPGALDPANASYPQQPIHPAMFPQS 369
Query: 188 SKY--------------------STFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLS 227
Y F VTNP+ E+EG ++GT GQ + D+ K+
Sbjct: 370 RTYMPPPKAGAGKDRDVPGEEEPGWFDNVTNPWEGEIEGWRVLGTGGQNLDDVFKYVESE 429
Query: 228 NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK 287
+ L ++E R VAPTAPDTL YPF +++P +I+ CP ++F G Q +F TK I
Sbjct: 430 DRLGMMEAMCRWRCVAPTAPDTLWSYPFQEDEPFVIKECPHLFFVGCQPEFGTKVIHGPD 489
Query: 288 DKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
+ VRLI+VP F +R V +++ TL+ + +
Sbjct: 490 GQAVRLIAVPSFSETREVVLVDTETLDVERVKI 522
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
+E + EK K V + L+ E C + GT++ LKP+IL+++S++ +
Sbjct: 72 WEGTVLGGEKVKRVERV----LDVRQGELCWVAGTVYMDMPLKPSILEDVSKDRWISAPT 127
Query: 78 QHTHFVSDS--DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
H+ S + D ++LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +
Sbjct: 128 SVGHYYSGNGEDSVMLEDDSGRIRLVGNALQNHFMVTGCIVAVMGTENANGEFEVIDLLF 187
Query: 135 ATPVFNP-RTTLSNNENKYVNHSSIEVDLMPGEF 167
A P R +LS + + SS +V++M F
Sbjct: 188 AELPPQPERWSLSKGKKE--ADSSEDVEMMDASF 219
>gi|145352809|ref|XP_001420728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580963|gb|ABO99021.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 429
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 19/182 (10%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHPVTNPYIFEMEGKLLMGTSG 214
S++ VD+M G+ DP N +PQQPLHP FPEASKY T VTNP+ ++ +GTSG
Sbjct: 245 SAVPVDVMSGKTDPTNKAMPQQPLHPVYFPEASKYEKTMCLVTNPHDLTVDQTSFLGTSG 304
Query: 215 QPVSDIAKFSNL---------------SNPLDILEYTLRCGHVAPTAPDTLACYPFYDND 259
Q V D+ KFS + P+ L TLR H+AP APDTLACYPF D D
Sbjct: 305 QNVEDVMKFSTIDADDVSSAFVGAAAAKRPVAALTQTLRWQHIAPGAPDTLACYPFKDRD 364
Query: 260 PMIIESCPDVYFTGNQSKFETKTIEIEKDKNVR---LISVPDFFSSRTVAILNLSTLECH 316
P +IE P VYF G Q F + + + V +++VP F S+ ++++ TL C
Sbjct: 365 PFVIERTPRVYFAGCQDAFGYERVSHDPAAGVADTLVVAVPKFSSTGIAVLVDIDTLSCR 424
Query: 317 SL 318
S+
Sbjct: 425 SI 426
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 45 EECVIIGTLFKHQQLKPNILKEI-------SEELKLVPQPQHTHFVSDSDELILEDELQR 97
E CVI+GT++K + KP IL E +E + + + + D L EDE R
Sbjct: 43 EACVIVGTIYKDMKDKPIILDEYVKGYGEEAEGAAATTREERATYTREDDGLEFEDEGAR 102
Query: 98 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSD-VCYATP 137
+ L G +D VTGVV A+KG V G F V D V YA P
Sbjct: 103 VKLLG-VDAGKFVTGVVCAVKGKAV-KGDFLVDDVVAYAPP 141
>gi|328859185|gb|EGG08295.1| hypothetical protein MELLADRAFT_35023 [Melampsora larici-populina
98AG31]
Length = 480
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEAS---KYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+DL+PG DP LPQQPLH CL P+++ + + NP+ ++ G+ +GTSGQ
Sbjct: 280 IDLIPGSNDPTTQALPQQPLHQCLLPKSNFEKQNNNLVNGPNPWWAKIGGQTFLGTSGQN 339
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ D+ ++ + L + L H++PT+PDTL CYPF D+DP I+E P V+F GNQ
Sbjct: 340 LDDVYRYVTHEDRLKLAIQMLEWNHISPTSPDTLWCYPFKDHDPFILEELPKVFFIGNQP 399
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
KFET+ + D ++I VP F + + ++ STLEC S+ +
Sbjct: 400 KFETELVTFPSDDQTKMILVPRFSKTGIIVLIKPSTLECKSITL 443
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE---LILEDELQRIP-L 100
++ V+IGT++ + KPN+L ++S E+ + +VS D+ ++LEDE RI L
Sbjct: 75 QKMVVIGTVYCDLKFKPNVLDDLSREVSTTSSLK--KWVSKDDQQITVMLEDESGRIKLL 132
Query: 101 HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFNPRTTLSNNE 149
+ + N VTG V+A+ G NG FKV ++ A P + R+ L E
Sbjct: 133 FDHPEEFNFVTGTVMAVLGEETENGDFKVHEIVNAGVPKQSIRSDLKEEE 182
>gi|254568372|ref|XP_002491296.1| DNA polymerase III (delta) subunit, essential for cell viability
[Komagataella pastoris GS115]
gi|238031093|emb|CAY69016.1| DNA polymerase III (delta) subunit, essential for cell viability
[Komagataella pastoris GS115]
Length = 461
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 13/173 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSG 214
+I VD++PG DPA LPQQPLH F + ++ + + TNP +++ G ++GTSG
Sbjct: 283 TIPVDILPGAEDPAEIALPQQPLHKAFFNSSRQFVGNRLNTKTNPQWWDLAGTEILGTSG 342
Query: 215 QPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
+ + DI K+ ++ + I+E T+R H+ PTAPDTL CYP+ D+DP ++
Sbjct: 343 ENIDDIFKYVVPNDYHVDEDGCENSRIKIIESTIRWQHILPTAPDTLWCYPYQDDDPFVL 402
Query: 264 ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
ES P VYF GNQ++FE+K I ++ V+L+S+P F + V IL+L+ L +
Sbjct: 403 ESTPHVYFVGNQARFESKDIILDNGFKVKLLSLPRFDQTGEVVILDLNDLSTN 455
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 11 FTGNQSKFETKTIEI----EKGKSVSVLKLSD----LNETDTEECVIIGTLFKHQQLKPN 62
+T +K + + IE KG+ ++ + +S LN + + +GT+F + KPN
Sbjct: 41 YTARANKLKPRLIEKCSEKWKGEKINGIPVSHTEKVLNISSNKATWCVGTVFCDLKYKPN 100
Query: 63 ILKEISEELK---LVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIK 118
ILK++SE + +V + T+ +SD+L+LEDE RI L G ID VTG +V +
Sbjct: 101 ILKDVSESMYGGPVVKKVDGTYADRESDQLMLEDESGRIALDGELIDKILLVTGCIVGVL 160
Query: 119 GTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVD 161
G + G F V D+ Y P LSN+ V+ I D
Sbjct: 161 GMEINPGVFTVVDIVYPEPGLQKPRLLSNHRIALVSGLGINGD 203
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
++ES P VYF GNQ++FE+K I ++ G V +L L ++T E VI+
Sbjct: 400 FVLESTPHVYFVGNQARFESKDIILDNGFKVKLLSLPRFDQTG--EVVIL 447
>gi|328352186|emb|CCA38585.1| DNA polymerase delta subunit 2 [Komagataella pastoris CBS 7435]
Length = 459
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 13/170 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSG 214
+I VD++PG DPA LPQQPLH F + ++ + + TNP +++ G ++GTSG
Sbjct: 281 TIPVDILPGAEDPAEIALPQQPLHKAFFNSSRQFVGNRLNTKTNPQWWDLAGTEILGTSG 340
Query: 215 QPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
+ + DI K+ ++ + I+E T+R H+ PTAPDTL CYP+ D+DP ++
Sbjct: 341 ENIDDIFKYVVPNDYHVDEDGCENSRIKIIESTIRWQHILPTAPDTLWCYPYQDDDPFVL 400
Query: 264 ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
ES P VYF GNQ++FE+K I ++ V+L+S+P F + V IL+L+ L
Sbjct: 401 ESTPHVYFVGNQARFESKDIILDNGFKVKLLSLPRFDQTGEVVILDLNDL 450
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 11 FTGNQSKFETKTIEI----EKGKSVSVLKLSD----LNETDTEECVIIGTLFKHQQLKPN 62
+T +K + + IE KG+ ++ + +S LN + + +GT+F + KPN
Sbjct: 39 YTARANKLKPRLIEKCSEKWKGEKINGIPVSHTEKVLNISSNKATWCVGTVFCDLKYKPN 98
Query: 63 ILKEISEELK---LVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIK 118
ILK++SE + +V + T+ +SD+L+LEDE RI L G ID VTG +V +
Sbjct: 99 ILKDVSESMYGGPVVKKVDGTYADRESDQLMLEDESGRIALDGELIDKILLVTGCIVGVL 158
Query: 119 GTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVD 161
G + G F V D+ Y P LSN+ V+ I D
Sbjct: 159 GMEINPGVFTVVDIVYPEPGLQKPRLLSNHRIALVSGLGINGD 201
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVII 50
++ES P VYF GNQ++FE+K I ++ G V +L L ++T E VI+
Sbjct: 398 FVLESTPHVYFVGNQARFESKDIILDNGFKVKLLSLPRFDQTG--EVVIL 445
>gi|116198135|ref|XP_001224879.1| hypothetical protein CHGG_07223 [Chaetomium globosum CBS 148.51]
gi|88178502|gb|EAQ85970.1| hypothetical protein CHGG_07223 [Chaetomium globosum CBS 148.51]
Length = 497
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
Query: 165 GEFDPANTTLPQQPLHPCLFPEASKYST----------FHPVTNPYIFEMEGKLLMGTSG 214
G DPAN + PQQP+HP +FP A Y+ F PVTNP+ E+EG ++GT G
Sbjct: 330 GAQDPANVSYPQQPIHPAMFPNARTYTAAPGASEQPGWFDPVTNPWEGEVEGWRVLGTGG 389
Query: 215 QPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
Q + DI K+ + + L ++E R APTAPDTL YPF D++P +++ CP +YF G
Sbjct: 390 QNLDDICKYVDSEDRLGMMEAMCRWRCSAPTAPDTLWSYPFQDDEPFVMKDCPHLYFVGC 449
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
Q +F TK IE + + VRL+ +P F +++ + +++ TL+ + +
Sbjct: 450 QPEFGTKIIESPQGQMVRLVLIPSFAATKEIVLIDTETLDVSKVKI 495
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV--SDSDELILEDELQRIPLHGNI 104
C +IGT++ LKP++L+++S++ + H+ + ++ ++LED+ R+PL G++
Sbjct: 97 CWVIGTVYMEMPLKPSVLEDVSKDRWISAPTMADHYYDGAGAESIMLEDDSGRVPLVGSV 156
Query: 105 -DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP-RTTLSNNENK-YVNHSSIEVD 161
+ VTG ++A+ GT +G+F+V D+ +A P R +LS K V +E+
Sbjct: 157 LKDYFLVTGCIIAVMGTENSDGQFEVIDLKFADLPSQPGRWSLSKGPKKPKVKDEDVEM- 215
Query: 162 LMPGEFDPANTTLPQQP 178
A+++ PQ P
Sbjct: 216 --------ADSSRPQPP 224
>gi|310794252|gb|EFQ29713.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 500
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 9/173 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------STFHPVTNPYIFEMEGK 207
SI V LMPG DPAN + PQQP+H +FP + Y F VTNP+ E++G
Sbjct: 320 SIPVTLMPGAEDPANASYPQQPIHAAMFPRSRPYCAAPGAKEPGWFDTVTNPWEGEIDGW 379
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
++GT GQ V D+ K+ + + L ++E R APTAPDTL YPF DNDP +++ P
Sbjct: 380 RVLGTGGQNVDDVFKYVDSDDRLGMMEAMCRWRCSAPTAPDTLWAYPFQDNDPFVMKDAP 439
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
+YF G Q F T I+ + VRL++VP F ++ + +++ TLE + +
Sbjct: 440 HLYFVGCQPDFSTTVIQGGDGQQVRLVTVPSFAETKELVLVDTETLEVSRVKI 492
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 8 DVYF---TGNQSKFETKTIEIEKGKSVSVLKLSDLNET----DTEECVIIGTLFKHQQLK 60
DVYF T Q E G + + +N E C + GT++ LK
Sbjct: 51 DVYFLRLTSIQPAVNAVAAEAWDGTVIGGEEAKHVNRVLDVRQGELCWVTGTVYMDMALK 110
Query: 61 PNILKEISEELKLVPQPQHT-HFVSDSDE--LILEDELQRIPLHGNI--DIHNQVTGVVV 115
PNIL++++++ + + P T + SD D+ ++LED+ RI L G++ IH VTG ++
Sbjct: 111 PNILEDVTKD-RWISAPVSTDRYYSDDDKDTIMLEDDSGRIRLVGDVLKSIH-LVTGTII 168
Query: 116 AIKGTPVGNGKFKVSDVCYATPVFNP-RTTLSNNENK 151
+ GT NG+ +V DV + P R TL+++ ++
Sbjct: 169 GVMGTENANGELEVIDVKFPDLAPQPSRWTLTDSPSQ 205
>gi|340522408|gb|EGR52641.1| hypothetical protein TRIREDRAFT_102401 [Trichoderma reesei QM6a]
Length = 504
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFP------------EASKYSTFHPVTNPYIFEM 204
SI V L+PG DPAN + PQQP+H +FP AS+ F VTNP+ E+
Sbjct: 326 SIPVTLLPGAQDPANASYPQQPIHTAMFPISRAYAADAAAASASQPGWFDTVTNPWEAEV 385
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
EG ++GT GQ V D+ K+ + L ++E R APTAPDTL YPF ++DP +++
Sbjct: 386 EGWRVLGTGGQNVDDVFKYVESDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQEDDPFVLK 445
Query: 265 SCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
SCP VYF G Q +F TK I ++VRLI+VP F S+ +++ TLE + +
Sbjct: 446 SCPHVYFVGCQPEFATKVIHGPDGQSVRLIAVPSFSKSKEFVLVDTETLEVSKVRI 501
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
++ I E+ K V + L+ E C + GT++ +LKPNIL+++S++ L
Sbjct: 70 WQDTQIGGERAKRVDRV----LDVRQGELCWVAGTVYMDMKLKPNILEDVSKDRWLSAPI 125
Query: 78 QHTHFVSD--SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+ SD SD+ +LED+ R+ L G+ + VTG ++A+ GT +G+F+V D+
Sbjct: 126 SSQKYYSDDGSDQTMLEDDSGRVRLVGDLLSTIPLVTGCIIAVMGTENTHGEFEVIDI 183
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGT 52
+++SCP VYF G Q +F TK I G+SV ++ + ++ ++E V++ T
Sbjct: 443 VLKSCPHVYFVGCQPEFATKVIHGPDGQSVRLIAVPSFSK--SKEFVLVDT 491
>gi|343425859|emb|CBQ69392.1| related to HYS2-DNA-directed DNA polymerase delta, 55 KD subunit
[Sporisorium reilianum SRZ2]
Length = 506
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 6/172 (3%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ V L+PGE DPA+ +PQQP+H L P A ++ + TNP ++ + L+GTSGQ
Sbjct: 332 SSMPVHLLPGERDPASVAVPQQPIHFALLPRAGRFDSLQRHTNPAWMQLGERTLLGTSGQ 391
Query: 216 PVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K+ + + +++ TL GHVAPTAPDTL CYPF +DP +++ PD+ G
Sbjct: 392 NIDDIFKYVDEPDDARIEMAMRTLEWGHVAPTAPDTLWCYPFKASDPFVLKHRPDILVVG 451
Query: 274 NQSKFETKTIEIEKD----KNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
NQ K+ + +K+ K R++ VP+F + V ++NL++LE + +E
Sbjct: 452 NQPKYASAVYGFDKEDGEGKGCRVVLVPEFAKIKQVVLVNLASLETRLVCIE 503
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 33 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDELIL 91
V ++ D+ + D C ++G ++ LKP++L++++ E L PQP + FV DEL +
Sbjct: 103 VDRILDVRQGDI--CYVVGNVYCAMPLKPDVLEDLTREQWLAPQPVRSKFVDYAKDELFI 160
Query: 92 EDELQRIPL-----HGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
ED+ R+ L G + + +TGVV A+ GT G F V D +A+ P L
Sbjct: 161 EDQSGRVKLVGDAIRGGTALRSMLITGVVAAVLGTETRAGDFDVVDAVFASLPPAPSKPL 220
Query: 146 SNNEN 150
+ EN
Sbjct: 221 TKAEN 225
>gi|312093875|ref|XP_003147835.1| pold2-prov protein [Loa loa]
Length = 451
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEMEGKLLMGTSG 214
S +EVD+MPG DP+ +PQQP+H +F SK+ + VTNPY F +EG ++GTSG
Sbjct: 277 SLLEVDVMPGLGDPSTYLMPQQPIHRAVFVMGSKHGKMLNLVTNPYQFSLEGVHIVGTSG 336
Query: 215 QPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
+ +SD+ +F+ N +++L L H+APT PDT+ +PF D DP IIES P + F N
Sbjct: 337 ECLSDLKRFTKRLNGIELLSKILDWQHLAPTIPDTVDGFPFMDRDPFIIESFPHILFAAN 396
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC--HSLVVEDLT 324
Q + +E E ++ L+S+P F + +V ++NL LE HS V+ L
Sbjct: 397 QPEASHALVEFEGNRRTLLLSIPSFTKTLSVVLVNLRNLEVVEHSFAVDRLV 448
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNI 104
+ ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+ Q + L G+
Sbjct: 74 KVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDDDQIVRLSGDF 133
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
+ TG VV I G N F+V++V + + P + N+ ++YV
Sbjct: 134 VMDEFATGCVVGIYGMQFDNDIFQVNEVIWPSKAPQPTYPILND-DRYV 181
>gi|393911544|gb|EJD76356.1| hypothetical protein LOAG_16701 [Loa loa]
Length = 414
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEMEGKLLMGTSG 214
S +EVD+MPG DP+ +PQQP+H +F SK+ + VTNPY F +EG ++GTSG
Sbjct: 240 SLLEVDVMPGLGDPSTYLMPQQPIHRAVFVMGSKHGKMLNLVTNPYQFSLEGVHIVGTSG 299
Query: 215 QPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
+ +SD+ +F+ N +++L L H+APT PDT+ +PF D DP IIES P + F N
Sbjct: 300 ECLSDLKRFTKRLNGIELLSKILDWQHLAPTIPDTVDGFPFMDRDPFIIESFPHILFAAN 359
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC--HSLVVEDLT 324
Q + +E E ++ L+S+P F + +V ++NL LE HS V+ L
Sbjct: 360 QPEASHALVEFEGNRRTLLLSIPSFTKTLSVVLVNLRNLEVVEHSFAVDRLV 411
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNI 104
+ ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+ Q + L G+
Sbjct: 37 KVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDDDQIVRLSGDF 96
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
+ TG VV I G N F+V++V + + P + N+++YV
Sbjct: 97 VMDEFATGCVVGIYGMQFDNDIFQVNEVIWPSKAPQPTYPIL-NDDRYV 144
>gi|451848592|gb|EMD61897.1| hypothetical protein COCSADRAFT_147056 [Cochliobolus sativus
ND90Pr]
Length = 519
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 11/169 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-----------TFHPVTNPYIFEME 205
++ + ++PG DP+N LPQQPLHP LFP Y+ F VTNP+ +++
Sbjct: 316 TLPITMLPGASDPSNVALPQQPLHPALFPNTRLYAEPPIASNETLNGFDAVTNPWTGDID 375
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++ T GQ V D+ K+ +D +E LR VAPTAPDTL CYPF D+DP+++
Sbjct: 376 GYRVLSTGGQTVKDLLKYFKHVKSVDAMEMMLRWRCVAPTAPDTLWCYPFQDHDPLMLTE 435
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
CP +Y G Q KFE K I+ + V ++SVP F ++ + ++++ + +
Sbjct: 436 CPHMYIAGCQKKFEKKIIKDPAGQKVLIVSVPKFHTTGKIVLVDMESWD 484
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 4 ESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
E+ + G ++ F + +++ +G E C ++GT++ KPN+
Sbjct: 69 EAWHNFELGGQKASFVDRVLDVRQG----------------ELCWVVGTVYMEMAQKPNV 112
Query: 64 LKEISEELKLVPQPQHTHFVSDS--DELILEDELQRI-----PLHGNIDIHNQVTGVVVA 116
L +I ++ + PQ ++S S DE++LEDE R+ PLHG+ VTG ++A
Sbjct: 113 LDDIGKDHWIADPPQRDTYISPSGGDEMMLEDESGRLRVTGEPLHGHF-----VTGCILA 167
Query: 117 IKGTPVGNGKFKV-SDVCYATPVFNPR 142
GT +G FKV + C P PR
Sbjct: 168 ALGTEEADGTFKVIATQCADLPRQPPR 194
>gi|401842457|gb|EJT44667.1| POL31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 514
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 33/197 (16%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 318 SISVDMMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNDSNKEILNLVTNPYEFTYSGVDV 377
Query: 210 MGTSGQPVSDIAKF-------------------------SNLSNPLDILEYTLRCGHVAP 244
+ SG+ ++DI K+ N+ + +D++E T++ ++AP
Sbjct: 378 LAISGKNINDICKYVIPSNEIVKEGQEKFMQGENNDDFKDNIEHRMDLMECTMKWQNIAP 437
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRT 304
TAPDTL CYP+ D DP +++ P VY GNQ F T++I+I KN+R+ISVP+F S+
Sbjct: 438 TAPDTLWCYPYTDKDPFVLDKWPHVYVVGNQPYFGTRSIDI-GGKNIRIISVPEFSSTGV 496
Query: 305 VAILNLSTLECHSLVVE 321
V +L+L TLE ++ ++
Sbjct: 497 VVLLDLETLEVETVKID 513
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L+E+ + P +T SDE++LEDE R+ L G+
Sbjct: 127 CWCVGSIYCEMKYKPNVLEEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 186
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP-VFNPRTTLSNNENKYVNHSSIEVDL 162
I +TGVVV I G G F+V D+CY TP V NP T + + +HS ++ L
Sbjct: 187 IRSAPFITGVVVGILGMEAEAGTFQVLDICYPTPLVQNPLPTRNAS-----SHSRGKIAL 241
Query: 163 MPG 165
+ G
Sbjct: 242 VSG 244
>gi|365759921|gb|EHN01679.1| Pol31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 489
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 33/197 (16%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDMMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNDSNKEILNLVTNPYEFTYSGVDV 352
Query: 210 MGTSGQPVSDIAKF-------------------------SNLSNPLDILEYTLRCGHVAP 244
+ SG+ ++DI K+ N+ + +D++E T++ ++AP
Sbjct: 353 LAISGKNINDICKYVIPSNENVKEGQEKFMQGENNDDFKDNIEHRMDLMECTMKWQNIAP 412
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRT 304
TAPDTL CYP+ D DP +++ P VY GNQ F T++I+I KN+R+ISVP+F S+
Sbjct: 413 TAPDTLWCYPYTDKDPFVLDKWPHVYVVGNQPYFGTRSIDI-GGKNIRIISVPEFSSTGV 471
Query: 305 VAILNLSTLECHSLVVE 321
V +L+L TLE ++ ++
Sbjct: 472 VVLLDLETLEVETVKID 488
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L+E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGSIYCEMKYKPNVLEEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP-VFNPRTTLSNNENKYVNHSSIEVDL 162
I +TG+VV I G G F+V D+CY TP V NP T + + +HS ++ L
Sbjct: 162 IRSAPFITGLVVGILGMEAEAGTFQVLDICYPTPLVQNPLPTRNAS-----SHSRGKIAL 216
Query: 163 MPG 165
+ G
Sbjct: 217 VSG 219
>gi|452980265|gb|EME80026.1| hypothetical protein MYCFIDRAFT_155847 [Pseudocercospora fijiensis
CIRAD86]
Length = 502
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-----------FHPVTNPYIFEME 205
SI + L+PG DP +T LPQQP+HP +F Y F TNP F+++
Sbjct: 323 SIPITLLPGLTDPTSTALPQQPIHPAMFTRCRAYMAAPLATETDSPWFDSTTNPAEFDLQ 382
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G +G GQ V D+ K+ + L+++E LR APTAPDTL C+PF D D +I+
Sbjct: 383 GWRFLGAGGQTVEDVYKYVDGEERLEMMEAMLRWRLSAPTAPDTLWCFPFQDGDKFVIQE 442
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
CP VYF G Q FE+ TIE + V+LI+VP F + V +++L L + E
Sbjct: 443 CPHVYFAGCQPNFESSTIEGPHGQLVKLIAVPSFKETGQVVLMDLEELSVEVVTFE 498
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 4 ESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
E+ D + G Q++ + +++ +G C +IGT+F LKPN+
Sbjct: 73 EAFSDFHIGGEQARKVDRVLDVRQGHL----------------CWVIGTVFVEMPLKPNV 116
Query: 64 LKEISEELKLVPQPQHTHFVSDSD--ELILEDELQRIPLHGNIDIHN-QVTGVVVAIKGT 120
L++I +E + P + ++LEDE R+ L G VTG +VA+ GT
Sbjct: 117 LEDIGKEHWIAAPPARQKYNPGEGNVSMMLEDESGRLKLTGGFLASVLLVTGAIVAVLGT 176
Query: 121 PVGNGKFKVSDV 132
+G F+V D+
Sbjct: 177 ENSDGDFEVLDI 188
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
+I+ CP VYF G Q FE+ TIE G+ V ++ + ET
Sbjct: 439 VIQECPHVYFAGCQPNFESSTIEGPHGQLVKLIAVPSFKET 479
>gi|213410357|ref|XP_002175948.1| DNA polymerase subunit delta-2 [Schizosaccharomyces japonicus
yFS275]
gi|212003995|gb|EEB09655.1| DNA polymerase subunit delta-2 [Schizosaccharomyces japonicus
yFS275]
Length = 452
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 134 YATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--S 191
Y T +++P + + Y SSI+V LMPG FD + LPQQPLHP L + ++ S
Sbjct: 258 YDTSLYDPNPMVHTDNLLYELCSSIDVTLMPGAFDFSTRVLPQQPLHPALLTRSKEWLQS 317
Query: 192 TFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA 251
+ TNP E+EG+ ++ TSGQ + D+ K+ ++PL ++E +L H+APT PDTL
Sbjct: 318 SLQTTTNPTWLEIEGRSILATSGQNIEDLHKYYPDNSPLALMEASLNWNHIAPTTPDTLW 377
Query: 252 CYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLS 311
CYPF D D II+ P VY GNQ F TK K + P+F T+ +LNL
Sbjct: 378 CYPFPDKDVFIIDKMPHVYMCGNQPSFGTKPNNTSKWWLLPAYLGPNFSEPGTLVLLNLK 437
Query: 312 TLECHSL 318
LE ++
Sbjct: 438 NLEVKTV 444
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 9 VYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECV-IIGTLFKHQQLKPNILKEI 67
+YF +K +TI+ + K +L + E ++ I+GT++ LKPN+L ++
Sbjct: 31 IYF-ARLNKLMPRTIDAARTKWPKYKQLDRVLEVKKDQVAWIVGTVYLSLALKPNVLADV 89
Query: 68 SEELKLVPQPQHTHFVSDSD------ELILEDELQRIP-LHGNIDIHNQVTGVVVAIKGT 120
+ + + + +V+ ++ + +ED R+ + ++ +N VTGVVVA G
Sbjct: 90 TSTHTINTELDDSLYVNPNEADPSNMKCFIEDGFGRVECVLSSVIPYNLVTGVVVAALGH 149
Query: 121 PVGNGKFKVSDVCYA 135
G F V DVC A
Sbjct: 150 EDEQGLFLVQDVCTA 164
>gi|328768289|gb|EGF78336.1| hypothetical protein BATDEDRAFT_13201, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 434
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 11/163 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ VD++PG DP + LPQQP+H +F A ++ VTNPY +G + Q
Sbjct: 268 SMPVDVVPGATDPTTSFLPQQPIHSSIFHSACNLTSLSMVTNPY------TATVGGTRQS 321
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ D+ K +N++ +D+ L+ GHVAPTAPDTL CYPF NDPM+I P +Y GNQ+
Sbjct: 322 LDDMYKMTNVAEGVDLASEVLKWGHVAPTAPDTLPCYPFSQNDPMVITVRPHLYIIGNQT 381
Query: 277 KFETKTIEIEKD-----KNVRLISVPDFFSSRTVAILNLSTLE 314
KF+TK IE+ D + R+I VP F ++ TV ++NL+TL+
Sbjct: 382 KFDTKVIELCGDGEPTLETTRVILVPSFSNTGTVVLVNLATLD 424
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 47 CVIIGTLFKHQQLKPNILKEIS-EELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 105
C IIGT+F KPNIL E+S EE +P P++ +VS+ D ++LEDE RI L G+I
Sbjct: 59 CYIIGTVFLDMSEKPNILDEVSREEWTALPTPKN-KYVSEKDAVLLEDESGRIVLTGDI- 116
Query: 106 IHNQV--TGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSI 158
I V TGV+ A+ G+ G+F+V DVCYA F+P+ L + + +N +I
Sbjct: 117 IKTTVFMTGVIAALLGSENQEGEFQVLDVCYA--AFDPQPPLPISTDSGINGCNI 169
>gi|336473003|gb|EGO61163.1| hypothetical protein NEUTE1DRAFT_76964 [Neurospora tetrasperma FGSC
2508]
gi|350293747|gb|EGZ74832.1| hypothetical protein NEUTE2DRAFT_155420 [Neurospora tetrasperma
FGSC 2509]
Length = 525
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 20/184 (10%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--------------------STFHPV 196
++ V L+PG DPAN + PQQP+HP +FP++ Y F V
Sbjct: 339 TMPVTLLPGALDPANASYPQQPIHPAMFPQSRTYMPPPKAGAGKDRDVPGEEEPGWFDNV 398
Query: 197 TNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFY 256
TNP+ E+EG ++GT GQ + D+ K+ + L ++E R VAPTAPDTL YPF
Sbjct: 399 TNPWEGEIEGWRVLGTGGQNLDDVFKYVESEDRLGMMEAMCRWRCVAPTAPDTLWSYPFQ 458
Query: 257 DNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
+++P +I+ CP ++F G Q +F TK I + VRLI+VP F +R V +++ TL+
Sbjct: 459 EDEPFVIKECPHLFFVGCQPEFGTKVIHGPDGQAVRLIAVPSFSETREVVLVDTETLDVE 518
Query: 317 SLVV 320
+ +
Sbjct: 519 RVKI 522
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
+E + EK K V + L+ E C + GT++ LKP+IL+++S++ +
Sbjct: 72 WEGTVLGGEKVKRVERV----LDVRQGELCWVAGTVYMDMPLKPSILEDVSKDRWISAPT 127
Query: 78 QHTHFVSDS--DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
H+ S + D ++LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +
Sbjct: 128 SVGHYYSGNGEDSVMLEDDSGRIRLVGNALQNHFMVTGCIVAVMGTENANGEFEVIDLLF 187
Query: 135 ATPVFNP-RTTLSNNENKYVNHSSIEVDLMPGEF 167
A P R +LS + + SS +V++M F
Sbjct: 188 AELPPQPERWSLSKGKKE--ADSSEDVEMMDASF 219
>gi|366992752|ref|XP_003676141.1| hypothetical protein NCAS_0D01980 [Naumovozyma castellii CBS 4309]
gi|342302007|emb|CCC69779.1| hypothetical protein NCAS_0D01980 [Naumovozyma castellii CBS 4309]
Length = 473
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 22/187 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKLL 209
SI + LMPG DP++ +LPQQPLH LF EA + + VTNPY F + G L
Sbjct: 286 SISIALMPGAGDPSDRSLPQQPLHKALFKEALRPYFDKMNNEILNLVTNPYQFNINGIEL 345
Query: 210 MGTSGQPVSDIAKF---------------SNLSNPLDILEYTLRCGHVAPTAPDTLACYP 254
+ +GQ ++DI K+ ++L + LD++E TL+ ++APTAPDTL YP
Sbjct: 346 LAIAGQNINDIHKYVISSQDLDSNSEVEKTDLEHRLDLMECTLKWQNIAPTAPDTLWAYP 405
Query: 255 FYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+ D DP +++ P VY GNQ +F T+ + + +++IS+P+F S+ + +L+L+TLE
Sbjct: 406 YKDFDPFVLDEWPHVYVVGNQPEFGTRDVTLNGGTKIKIISIPEFSSTGGIVLLDLNTLE 465
Query: 315 CHSLVVE 321
+ +E
Sbjct: 466 TELVQIE 472
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGN-I 104
C IGT++ + KPNIL+E+ + P ++ + +DE++LEDE R+ L G+ I
Sbjct: 96 CWCIGTIYCEMKYKPNILEEVVNDTYGAPDLVKSYMDPEGADEIMLEDESGRVLLVGDFI 155
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEV 160
+TG VV + G G F+V D+CY P P+ LS +K NH I +
Sbjct: 156 KSTPFITGTVVGVLGMEADAGTFQVLDICY--PAAIPQKPLSLPTDKK-NHGKIAL 208
>gi|330801695|ref|XP_003288860.1| hypothetical protein DICPUDRAFT_153145 [Dictyostelium purpureum]
gi|325081106|gb|EGC34635.1| hypothetical protein DICPUDRAFT_153145 [Dictyostelium purpureum]
Length = 526
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
SI VD+MPG DP N +LPQ PL+ CLFP + + + TNPY + G++L+GTSGQ
Sbjct: 350 SIPVDIMPGPNDPTNVSLPQLPLNSCLFPFSIQNTNTTFATNPYESLVGGRVLLGTSGQN 409
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ + +++ + + I E TL H+APTAPDTL C D DP +IE CP + F GNQ
Sbjct: 410 IENASRYMKSESKMKIAENTLVWRHLAPTAPDTLTCSAL-DQDPFVIEQCPHILFFGNQD 468
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+E+K ++ D+ VRLI +P F + T+ +NL TL+
Sbjct: 469 HYESKLLKGPNDEVVRLIFIPKFSETNTIVCVNLKTLD 506
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH-FVSDSDELILEDELQRIPLHGN 103
+ECV+IGTL+K +LKPNILK+ +++ ++P P + F+S+ D+L ED+ R+ L G
Sbjct: 144 DECVMIGTLYKEMELKPNILKQYAQDRAMLPLPDNRESFISEKDKLFFEDDTGRVKLIGE 203
Query: 104 ID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ + VTG+ VAI+G + + +F++ +V +
Sbjct: 204 KGMVDSLVTGLNVAIRGRGLTDAEFEIQEVLF 235
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTL 53
+IE CP + F GNQ +E+K ++ + V ++ + +ET+T CV + TL
Sbjct: 453 FVIEQCPHILFFGNQDHYESKLLKGPNDEVVRLIFIPKFSETNTIVCVNLKTL 505
>gi|145542454|ref|XP_001456914.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424728|emb|CAK89517.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEA-SKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
V +MPGE +P + LPQ PLH FPE K ++NP F + ++GTSGQ +S
Sbjct: 302 VAVMPGENEPVSQMLPQTPLHRSHFPETFEKEHQLILLSNPTEFTLGDLKILGTSGQNIS 361
Query: 219 DIAKFSNLSNP--LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
DI K S + N +D+LE T+ G++APTAPDTL +P D DP +++ P++YF GN
Sbjct: 362 DIKKCSQVKNQEDVDLLEMTMFYGNIAPTAPDTLISFPQKDQDPFVLQELPNIYFVGNMQ 421
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
KF TK + NVR++SVP F + T+ ++NLSTLEC ++++
Sbjct: 422 KFGTKMVA----DNVRIVSVPAFSETGTICLINLSTLECFPVIIQ 462
>gi|47212927|emb|CAF90299.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 9/161 (5%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPG++DP N LPQQPLH C+FP +S YST H V+NPY +++G +GTSGQ
Sbjct: 290 ASVPVDVMPGQYDPTNYNLPQQPLHHCMFPLSSAYSTLHLVSNPYQADIDGVRFLGTSGQ 349
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
VSDI ++S++ + L+ILE TL H+APTAPDTL F + + D +F+ Q
Sbjct: 350 NVSDIHRYSSMDSHLEILEETLHLRHLAPTAPDTLVKVRFQNRE--------DFHFSRWQ 401
Query: 276 SKF-ETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
S + V L+++P+F S+ ++NL TL C
Sbjct: 402 STIPAGGGELGPGGQEVLLVTIPEFSHSQAACLVNLRTLSC 442
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
Query: 20 TKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQH 79
++T + G V V KL DL ET E C I+GTLFK L+P+ILKEIS+E L+PQP
Sbjct: 68 SETARQKWGSDVPVKKLCDL-ETG-ERCCIVGTLFKSMDLQPSILKEISDEHNLLPQPAR 125
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PV 138
++S++D LILEDELQRI L G ID VTG V+AI G+ +GKF V D C A P+
Sbjct: 126 AKYISETDNLILEDELQRIKLGGKIDKDKCVTGSVIAIYGSERNDGKFTVEDFCLAGFPL 185
Query: 139 FNPRTTLS 146
PR LS
Sbjct: 186 QTPRPALS 193
>gi|171692853|ref|XP_001911351.1| hypothetical protein [Podospora anserina S mat+]
gi|170946375|emb|CAP73176.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 124 NGKFKVSDVCYATPVFNPRTTLSNNENKYVNH--SSIEVDLMPGEFDPANTTLPQQPLHP 181
N K Y +NP S + ++N S+ + L+PG DPAN + PQQP+H
Sbjct: 290 NTKTHAKKYGYDASAYNPAP--SQLLDSFLNELLPSLPITLLPGANDPANVSYPQQPIHS 347
Query: 182 CLFPEASKY--STFHP--------VTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLD 231
+FPE+ Y + HP TNP+ E+EG ++GTSGQ + DI K+ + L
Sbjct: 348 AMFPESRYYGPTPTHPDQTGWLDATTNPFESEIEGWRVLGTSGQNLDDICKYMEDPDRLG 407
Query: 232 ILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNV 291
++E R APTAPDTL YPF D++P +++ CP +YF G+Q KF +K IE + V
Sbjct: 408 LMEAMCRWRCSAPTAPDTLWSYPFQDDEPFVMKECPHLYFVGSQPKFGSKVIEGPDGQIV 467
Query: 292 RLISVPDFFSSRTVAILNLSTLECHSLV 319
RL+ VP F ++ V +++ TL+ SLV
Sbjct: 468 RLVLVPKFSETKEVVLVDTETLDV-SLV 494
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 4 ESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
E+ D G +K + +++ +G E C + GT++ LKP+I
Sbjct: 72 EAWDDTVLGGENAKKVERVLDVRQG----------------ELCWVAGTVYMDMPLKPSI 115
Query: 64 LKEISEELKLVPQPQHTHFVSD--SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGT 120
L+++S++ + H+ S+ D+++LED+ RI L G + + VTG ++A+ GT
Sbjct: 116 LEDVSKDRWISAPTSVGHYYSEDGKDQVMLEDDSGRIRLVGEPLKNYFLVTGCIIAVMGT 175
Query: 121 PVGNGKFKVSDVCYAT-PVFNPRTTLSNNENKYVNHSSIEV 160
NG+F+V D+ +A P PR LS+ + K + S ++V
Sbjct: 176 ENANGEFEVIDLKFADLPPQPPRWALSDKKPKSEDVSMVDV 216
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGT 52
+++ CP +YF G+Q KF +K IE G+ V ++ + +E T+E V++ T
Sbjct: 437 FVMKECPHLYFVGSQPKFGSKVIEGPDGQIVRLVLVPKFSE--TKEVVLVDT 486
>gi|45184692|ref|NP_982410.1| AAL132Cp [Ashbya gossypii ATCC 10895]
gi|44980038|gb|AAS50234.1| AAL132Cp [Ashbya gossypii ATCC 10895]
Length = 415
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 18/184 (9%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKL 208
+S+ + ++PG DP+ +LPQQPLH LF +A K F VTNPY F++EG
Sbjct: 231 TSLPITILPGANDPSERSLPQQPLHKALFKQALKPYFAEVNSEVFESVTNPYWFDLEGIQ 290
Query: 209 LMGTSGQPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
++ +SGQ V D+ K+ + + LD++E +L+ ++APTAPDTL CYP+ D
Sbjct: 291 VLVSSGQNVDDMCKYVIPYLGTEQLRDTIEHRLDLIEASLKWQNIAPTAPDTLWCYPYKD 350
Query: 258 NDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHS 317
NDP I+ P VY GNQ + + + +E + V LI++P F SS IL+L TL
Sbjct: 351 NDPFIMNEWPHVYIIGNQHAYGYRKVLLENEVEVVLITLPKFSSSGQFVILDLDTLNAEV 410
Query: 318 LVVE 321
+ ++
Sbjct: 411 ITID 414
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD- 85
+GK V V K L+ E C +GT++ + KPN+L+E+ + P ++ +
Sbjct: 33 QGKPV-VQKAKVLDIQAGEPCWCVGTIYCEMKYKPNVLEEVVNDTYGTKAPVKSYTDPEG 91
Query: 86 SDELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
+DE++LEDE R+ L G+I VTG VV + G G F+V D+CY
Sbjct: 92 TDEIMLEDESGRVLLVGDIITSTPFVTGTVVGVLGMEAEAGTFQVVDICY 141
>gi|396458314|ref|XP_003833770.1| similar to DNA polymerase subunit delta-2 [Leptosphaeria maculans
JN3]
gi|312210318|emb|CBX90405.1| similar to DNA polymerase subunit delta-2 [Leptosphaeria maculans
JN3]
Length = 522
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 165 GEFDPANTTLPQQPLHPCLFPEASKYS--------TFHP---VTNPYIFEMEGKLLMGTS 213
G DPAN LPQQ LH L P++ Y+ T H VTNP+ +++G +GT+
Sbjct: 349 GASDPANVALPQQTLHTALLPKSRLYANPPAQTNETLHGLDTVTNPWSADIDGYRFLGTA 408
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ V+D+ K+ + PL+ +E LR VAPTAPDTL CYPF D+DPM+++ CP VYF G
Sbjct: 409 GQTVADLLKYVDDVQPLEAMEMMLRWRCVAPTAPDTLWCYPFQDDDPMLLKDCPHVYFAG 468
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
Q++ +K +E + V L++VP F + + +L++ + E
Sbjct: 469 CQNRAASKLVEGPAGQRVLLVTVPRFRETGQLVVLDMESWE 509
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 4 ESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
E+ D G ++ F + +++ +G E C I+GT++ LKPN+
Sbjct: 94 EAWSDFELGGEKATFIERVLDVRQG----------------ELCWIVGTVYMEMALKPNV 137
Query: 64 LKEISEELKLVPQPQHTHFVS--DSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTP 121
L +IS+E + P +VS DE++LEDE R+ + G + VTG ++A GT
Sbjct: 138 LDDISKEHWIAAPPPRETYVSPNGQDEMMLEDESGRLRVTGESLNSHYVTGCILAALGTE 197
Query: 122 VGNGKFKVSDVCYA 135
+G F+V YA
Sbjct: 198 QADGTFQVIATQYA 211
>gi|374105608|gb|AEY94519.1| FAAL132Cp [Ashbya gossypii FDAG1]
Length = 415
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 18/184 (9%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKL 208
+S+ + ++PG DP+ +LPQQPLH LF +A K F VTNPY F++EG
Sbjct: 231 TSLPITILPGANDPSERSLPQQPLHKALFKQALKPYFAEVNSELFESVTNPYWFDLEGIQ 290
Query: 209 LMGTSGQPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
++ +SGQ V D+ K+ + + LD++E +L+ ++APTAPDTL CYP+ D
Sbjct: 291 VLVSSGQNVDDMCKYVIPYLGTEQLRDTIEHRLDLIEASLKWQNIAPTAPDTLWCYPYKD 350
Query: 258 NDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHS 317
NDP I+ P VY GNQ + + + +E + V LI++P F SS IL+L TL
Sbjct: 351 NDPFIMNEWPHVYIIGNQHAYGYRKVLLENEVEVVLITLPKFSSSGQFVILDLDTLNAEV 410
Query: 318 LVVE 321
+ ++
Sbjct: 411 ITID 414
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD- 85
+GK V V K L+ E C +GT++ + KPN+L+E+ + P ++ +
Sbjct: 33 QGKPV-VQKAKVLDIQAGEPCWCVGTIYCEMKYKPNVLEEVVNDTYGTKAPVKSYTDPEG 91
Query: 86 SDELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
+DE++LEDE R+ L G+I VTG VV + G G F+V D+CY
Sbjct: 92 TDEIMLEDESGRVLLVGDIITSTPFVTGTVVGVLGMEAEAGTFQVVDICY 141
>gi|58263352|ref|XP_569086.1| DNA polymerase Delta, small subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108624|ref|XP_776965.1| hypothetical protein CNBB4930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259648|gb|EAL22318.1| hypothetical protein CNBB4930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223736|gb|AAW41779.1| DNA polymerase Delta, small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 510
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ + L+PG DPA TLPQQPL LF +K TNP E+ G+ + T GQ
Sbjct: 323 SSLPIHLIPGPSDPAGATLPQQPLPKILFGGKAKTEGLECETNPTWMEVGGRSFLTTGGQ 382
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI K+ ++ L + + TL H+APTAPDTL YPF D DP I+ PDVY GNQ
Sbjct: 383 AIDDIFKYVPGNSRLGMTQRTLEWRHMAPTAPDTLWIYPFPDTDPFIMNYRPDVYIVGNQ 442
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+FET TI ++D RL+ +P F + +A + L TLEC +L E
Sbjct: 443 PEFET-TIIGDEDAPTRLVLLPSFAKTGVIAFVCLETLECRTLEFE 487
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN T ++ C I+GT++ LKPNIL++++ + L T F S D + LEDE R+
Sbjct: 80 LNLTRSQLCYIVGTVYMEMPLKPNILEDMARDHWLAAPIPRTKFFSAQDSIHLEDESGRV 139
Query: 99 PLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP----VFNPRTTLSN 147
L G+ + VTGV++A G +G F+V D+C+A V NP + +
Sbjct: 140 RLIGDAIQRERDREGGGLVTGVIMAALGMETPSGDFEVIDICFAGMPDKLVLNPAPSSAK 199
Query: 148 NENKYVNHSSIEVDL 162
+ K + ++D+
Sbjct: 200 RKGKEKVENDEDIDM 214
>gi|401624997|gb|EJS43023.1| hys2p [Saccharomyces arboricola H-6]
Length = 490
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 36/199 (18%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHP--------VTNPYIFEMEGKL 208
SI VD+MPG DP++ +LPQQP H LF E+ + S FH VTNPY F G
Sbjct: 293 SISVDVMPGTNDPSDKSLPQQPFHKSLFDESLE-SFFHGSNKEILNLVTNPYEFCYNGVD 351
Query: 209 LMGTSGQPVSDIAKF--------------------------SNLSNPLDILEYTLRCGHV 242
++ SG+ ++DI K+ ++ + LD++E T++ ++
Sbjct: 352 VLAISGKNINDICKYVIPSNEKVDNDSENKVAQDQNSDDFKDDIEHRLDLMECTMKWQNI 411
Query: 243 APTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSS 302
APTAPDTL CYP+ + DP +++ P VY GNQ F T+ ++I DK++R+ISVP+F S+
Sbjct: 412 APTAPDTLWCYPYTEKDPFVLQKWPHVYVVGNQPNFGTRLMKI-GDKSIRIISVPEFSST 470
Query: 303 RTVAILNLSTLECHSLVVE 321
V +LNL TLE ++ ++
Sbjct: 471 GVVVLLNLETLEVETVKID 489
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C IG+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCIGSIYCEMKYKPNVLDEVINDTYGAPDLAKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF-NPRTTLS 146
I +TGVVV I G G F+V D+CY TP+ NP T S
Sbjct: 162 IRSAPFITGVVVGILGMEADAGTFQVLDICYPTPLLQNPLPTPS 205
>gi|403375590|gb|EJY87771.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 504
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
++VD+MPG+ D +++ LPQQPL+ CLFP+ + + VTNP+ FEM G +G SGQ +
Sbjct: 296 VDVDIMPGQDDFSSSFLPQQPLNSCLFPQLQDKQSINLVTNPHKFEMNGLKFLGCSGQNL 355
Query: 218 SDIAKFSN---LSN-------PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
+DI ++ L+N L L+ TL HV PTAPDTL YP + DP II+ P
Sbjct: 356 NDIYSYTKGNLLANSTEQNYDALSGLQLTLEMRHVCPTAPDTLRAYPQLEEDPFIIDKAP 415
Query: 268 DVYFTGNQSKFETKTIEIEKD---------KNVRLISVPDFFSSRTVAILNLSTLECHSL 318
VYF GNQ+ ++ + + + + V+LISVP F ++++ +L+LSTL+ +
Sbjct: 416 HVYFAGNQAAYQEDILLADNNQKHSNSSFIQGVKLISVPTFSQTKSIVLLDLSTLQSYE- 474
Query: 319 VVEDLTE 325
V DL+E
Sbjct: 475 VKFDLSE 481
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI 106
VIIGT+FK LKP+ILK + L + +H +V + D +LED RI L +
Sbjct: 78 TVIIGTIFKEMPLKPSILKNVLGVLG-TQKFKHGLYVGEEDYAVLEDSSGRIRLKKGLKF 136
Query: 107 HNQ--VTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ V+G ++ +KG NG F+V D YA
Sbjct: 137 NPDFFVSGSILGLKGVVDTNGFFEVHDHTYA 167
>gi|170583253|ref|XP_001896497.1| pold2-prov protein [Brugia malayi]
gi|158596279|gb|EDP34654.1| pold2-prov protein, putative [Brugia malayi]
Length = 449
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEMEGKLLMGTSGQP 216
+EVD+MPG DP+ +PQQP+H +F SKY + VTNPY F +EG ++GTSG+
Sbjct: 277 LEVDVMPGLGDPSTYLMPQQPIHRAVFVMGSKYGRMLNLVTNPYEFSVEGVHILGTSGEC 336
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+SD+ +F+ + +++L L H+APT PDT+ +PF D DP IIES P + F NQ
Sbjct: 337 LSDLKRFTKTLSGVELLSKVLDWQHLAPTIPDTVDGFPFIDRDPFIIESFPHILFAANQP 396
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC--HSLVVEDL 323
+ +E E ++ L+SVP F + ++ ++NL LE H+ V+ L
Sbjct: 397 EASHALVEFEGNRRTLLLSVPSFTKTFSMVLVNLRNLEVIEHNFFVDRL 445
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGN 103
+E ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+ Q + L G+
Sbjct: 73 DEVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDDDQIVRLSGD 132
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSS 157
+ TG VV I G + N F+V + + + P T N+++Y+ S
Sbjct: 133 FVMDEVATGCVVGIYGRQLDNDIFQVIKIIWPSKAPQP-TYPVLNDDRYIAFVS 185
>gi|403359564|gb|EJY79446.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 504
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+++D+MPG+ D +++ LPQQPL+ CLFP+ + + VTNP+ FEM G +G SGQ +
Sbjct: 296 VDIDIMPGQDDFSSSFLPQQPLNSCLFPQLQDKQSINLVTNPHKFEMNGLQFLGCSGQNL 355
Query: 218 SDIAKFSN---LSN-------PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
+DI ++ L+N L L+ TL HV PTAPDTL YP + DP II+ P
Sbjct: 356 NDIYSYTKGNLLANSTEQNYDALSGLQLTLEMRHVCPTAPDTLRAYPQLEEDPFIIDKAP 415
Query: 268 DVYFTGNQSKFETKTIEIEKD---------KNVRLISVPDFFSSRTVAILNLSTLECHSL 318
VYF GNQ+ ++ + + + + V+LISVP F ++++ +L+LSTL+ +
Sbjct: 416 HVYFAGNQAAYQEDVLLADNNQKHSNSSFIQGVKLISVPTFSQTKSIVLLDLSTLQSYE- 474
Query: 319 VVEDLTE 325
V DL+E
Sbjct: 475 VKFDLSE 481
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI 106
VIIGT+FK LKP+ILK + L + +H +V + D +LED RI L +
Sbjct: 78 TVIIGTIFKEMPLKPSILKNVLGVLG-TQKFKHGLYVGEEDYAVLEDSSGRIRLKKGLKF 136
Query: 107 HNQ--VTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ V+G ++ +KG NG F+V D YA
Sbjct: 137 NPDFFVSGSILGLKGVVDTNGFFEVHDHTYA 167
>gi|367038615|ref|XP_003649688.1| hypothetical protein THITE_2108468 [Thielavia terrestris NRRL 8126]
gi|346996949|gb|AEO63352.1| hypothetical protein THITE_2108468 [Thielavia terrestris NRRL 8126]
Length = 518
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 21/177 (11%)
Query: 165 GEFDPANTTLPQQPLHPCLFPEASKYST---------------------FHPVTNPYIFE 203
GE DPANT+ PQQP+HP +FP + Y+ VTNP+ E
Sbjct: 340 GELDPANTSYPQQPIHPAMFPRSRSYTAAPVTAPEEAQQQQQQQKQPGWLDNVTNPWEGE 399
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
+EG ++GT GQ + DI K+ + + L ++E R APTAPDTL YPF +++P ++
Sbjct: 400 VEGWRVLGTGGQNLDDICKYIDSDDRLGMMEAMCRWRCCAPTAPDTLWAYPFQEDEPFVM 459
Query: 264 ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
CP +YF G Q +F TK IE + + VRLI VP F ++R + +++ TL+ + +
Sbjct: 460 RECPHLYFVGCQPEFGTKVIEGPQGQMVRLILVPSFAATREIVLVDTETLDVSKVKI 516
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQRIPLHGNI 104
C + GT++ LKP++L+++S++ + H+ S+ + ++LED+ RI L G I
Sbjct: 97 CWVAGTVYMDMPLKPSVLEDVSKDRWISAPTTVGHYYSENGGESIMLEDDSGRIRLVGAI 156
Query: 105 -DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ VTG ++A+ GT NG+F+V D+ +A
Sbjct: 157 LKDYFLVTGCIIAVMGTENVNGEFEVIDLKFA 188
>gi|254583408|ref|XP_002497272.1| ZYRO0F01738p [Zygosaccharomyces rouxii]
gi|238940165|emb|CAR28339.1| ZYRO0F01738p [Zygosaccharomyces rouxii]
Length = 470
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 24/189 (12%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKL 208
SI +DLMPG DP + +LPQQPLH LF ++ + F+ VTNPY F EG
Sbjct: 282 QSIPIDLMPGMKDPTDKSLPQQPLHKALFRDSLRPLFEEVNKQLFNVVTNPYCFTFEGLK 341
Query: 209 LMGTSGQPVSDIAKF----------------SNLSNPLDILEYTLRCGHVAPTAPDTLAC 252
L+ +GQ ++DI K+ + + LD++E T++ ++APTAPDTL
Sbjct: 342 LLAIAGQNINDICKYIIPYQEDGKSEDSQLEDTVDHRLDLMECTMKWQNLAPTAPDTLWT 401
Query: 253 YPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLST 312
YP+ D+DP ++ P +Y GNQ F T+ +++ K + +++ISVP+F S+ + +L++ T
Sbjct: 402 YPYKDDDPFLLAEWPHIYAVGNQPDFGTRELDL-KGRRIKMISVPEFSSTGKIVLLDIKT 460
Query: 313 LECHSLVVE 321
LE + +E
Sbjct: 461 LETEIVNIE 469
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 33 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELIL 91
V+K L+ + C IG+++ + KPNIL+E+ + P ++ V +DE++L
Sbjct: 82 VMKQKVLDIQAGQPCWAIGSIYCEMKYKPNILEEVINDTYGAPDLTKSYTDVEGTDEVML 141
Query: 92 EDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNEN 150
EDE R+ L G+ I VTG V+ + G G F+V D+CY TP+ P++ L
Sbjct: 142 EDESGRVLLVGDYISKTPFVTGTVIGVLGMEAEAGTFQVLDICYPTPL--PQSPLP---- 195
Query: 151 KYVNHSSIEVDLMPG 165
K+ H + ++ L+ G
Sbjct: 196 KHDKHDNRKIALISG 210
>gi|363752703|ref|XP_003646568.1| hypothetical protein Ecym_4733 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890203|gb|AET39751.1| hypothetical protein Ecym_4733 [Eremothecium cymbalariae
DBVPG#7215]
Length = 462
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLF-PEASKY------STFHPVTNPYIFEMEGKLL 209
S+ + ++PG DP +LPQQPL+ LF P Y F PVTNPY F++EG +
Sbjct: 276 SLPITMLPGASDPTEISLPQQPLNKALFKPSLKPYFAEINDDLFEPVTNPYWFDIEGTQI 335
Query: 210 MGTSGQPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDN 258
+ TSGQ + DI K+ + + L+++E TL+ ++APTAPDTL +PF D
Sbjct: 336 LATSGQNIDDICKYIIPYYEGSDKNDAIEHRLNLMEATLKWQNIAPTAPDTLWSFPFKDR 395
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
DP I++ P VY GNQ +F + + +E V +IS+P F + +L+L TLE ++
Sbjct: 396 DPFILKEWPHVYIVGNQPEFGHRKVTLENSITVHIISLPAFSETGQFLVLDLGTLESETI 455
Query: 319 VVE 321
+E
Sbjct: 456 TIE 458
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV 74
Q K++ +I+ V K+ D+ T+ CV GT++ + KPNIL+E+ + V
Sbjct: 66 QEKWD-DGFQIQGKTVVQKKKVLDIQATEPSWCV--GTIYCEMKYKPNILEEVINDTYGV 122
Query: 75 PQPQHTHF-VSDSDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSD 131
++ + SDE++LEDE RI L G++ I N VTG+VV + G G F+V D
Sbjct: 123 TGVVKSYTDIQGSDEVMLEDESGRILLIGDL-IKNTIFVTGIVVGVLGMEAEAGTFQVLD 181
Query: 132 VCYATPVFNPRTTLSNNENKYV 153
+CY + P+ LSN K V
Sbjct: 182 ICYPKSI--PQAPLSNVNGKKV 201
>gi|290771209|emb|CBK33737.1| Pol31p [Saccharomyces cerevisiae EC1118]
gi|323347911|gb|EGA82171.1| Pol31p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764809|gb|EHN06329.1| Pol31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 487
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|6322465|ref|NP_012539.1| Pol31p [Saccharomyces cerevisiae S288c]
gi|1170421|sp|P46957.1|DPOD2_YEAST RecName: Full=DNA polymerase delta small subunit; AltName:
Full=Hydroxyurea-sensitive protein 2
gi|854579|emb|CAA60928.1| ORF YJR83.7 [Saccharomyces cerevisiae]
gi|1015630|emb|CAA89528.1| HUS2 [Saccharomyces cerevisiae]
gi|285812899|tpg|DAA08797.1| TPA: Pol31p [Saccharomyces cerevisiae S288c]
gi|392298434|gb|EIW09531.1| Pol31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 487
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|151945082|gb|EDN63333.1| DNA polymerase delta subunit [Saccharomyces cerevisiae YJM789]
gi|190409493|gb|EDV12758.1| DNA polymerase delta subunit [Saccharomyces cerevisiae RM11-1a]
gi|207343903|gb|EDZ71219.1| YJR006Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 487
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|349579196|dbj|GAA24359.1| K7_Hys2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 487
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDISLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGENINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +GT++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGTIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|321252422|ref|XP_003192401.1| DNA polymerase delta, small subunit [Cryptococcus gattii WM276]
gi|317458869|gb|ADV20614.1| DNA polymerase delta, small subunit, putative [Cryptococcus gattii
WM276]
Length = 508
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ + L+PG DPA TLPQQPL LF +K TNP E+ G+ + T GQ
Sbjct: 321 TSLPIHLIPGPSDPAGATLPQQPLPKILFGGKAKTEGLECETNPTWMEVGGRSFLTTGGQ 380
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI K+ + L + + TL H+APTAPDTL YPF D DP I++ PDVY GNQ
Sbjct: 381 AIDDIFKYIPGKSRLGMTQRTLEWRHMAPTAPDTLWIYPFPDADPFIMKHRPDVYIVGNQ 440
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+FET TI D RL+ +P F + T+A + L TLEC +L E
Sbjct: 441 PEFET-TIIGGDDAPTRLVLLPSFAKTGTLAFVCLETLECKTLEFE 485
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN T ++ C I+GT++ LKPNIL++++ + L T F S D + LEDE R+
Sbjct: 80 LNLTRSQLCYIVGTIYMEMPLKPNILEDMARDHWLSAPIPRTKFFSAQDSVHLEDESGRV 139
Query: 99 PLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
L G++ + VTGV++A G +G F+V D+C+A
Sbjct: 140 RLIGDVIQKERDREGGGLVTGVIMAALGMETPSGDFEVIDICFA 183
>gi|256270211|gb|EEU05433.1| Pol31p [Saccharomyces cerevisiae JAY291]
Length = 487
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKLLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGKNINDICKYVIPSNDNGESENKIEESESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +GT++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGTIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVV+ I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVLGILGMEAEAGTFQVLDICYPTPL 196
>gi|323354326|gb|EGA86166.1| Pol31p [Saccharomyces cerevisiae VL3]
Length = 472
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 278 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 337
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 338 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 397
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 398 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 456
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 457 LLDLETLEAETVKID 471
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 87 CWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 146
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 147 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 181
>gi|323304341|gb|EGA58114.1| Pol31p [Saccharomyces cerevisiae FostersB]
Length = 487
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKXLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGENINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G ++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGXIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|1256943|dbj|BAA08859.1| HYS2 [Saccharomyces cerevisiae]
Length = 487
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 293 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 352
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 353 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 412
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 413 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFNSTGMII 471
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 472 LLDLETLEAETVKID 486
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN- 103
C +G+++ + KPN+L E+ + P +T SDE++LEDE R+ L G+
Sbjct: 102 CWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVHLVGDF 161
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
I +TGVVV I G G F+V D+CY TP+
Sbjct: 162 IRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|323336923|gb|EGA78180.1| Pol31p [Saccharomyces cerevisiae Vin13]
Length = 376
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 31/195 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEA-------SKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQP H LF ++ S + VTNPY F G +
Sbjct: 182 SISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDV 241
Query: 210 MGTSGQPVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTA 246
+ SG+ ++DI K+ ++ + LD++E T++ ++APTA
Sbjct: 242 LAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTA 301
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDTL CYP+ D DP +++ P VY NQ F T+ +EI KN+++ISVP+F S+ +
Sbjct: 302 PDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEI-GGKNIKIISVPEFSSTGMII 360
Query: 307 ILNLSTLECHSLVVE 321
+L+L TLE ++ ++
Sbjct: 361 LLDLETLEAETVKID 375
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 57 QQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGV 113
+ KPN+L E+ + P +T SDE++LEDE R+ L G+ I +TGV
Sbjct: 1 MKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDFIRSTPFITGV 60
Query: 114 VVAIKGTPVGNGKFKVSDVCYATPV 138
VV I G G F+V D+CY TP+
Sbjct: 61 VVGILGMEAEAGTFQVLDICYPTPL 85
>gi|353235258|emb|CCA67274.1| related to dna polymerase delta small subunit [Piriformospora
indica DSM 11827]
Length = 480
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 4/204 (1%)
Query: 125 GKFKVSDVCYATPVFN--PRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPC 182
K Y + F+ P +LS + ++ ++ V L+PG DP++ TLPQQPL
Sbjct: 279 AKRAAKKFSYQSSAFSMHPTQSLSGHLSELAR--AMIVHLVPGANDPSSATLPQQPLPRA 336
Query: 183 LFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHV 242
+F A Y +FH TNP ++G GQP+ D+ ++ S+ L + L+ H+
Sbjct: 337 MFGAAKDYESFHTETNPCWIGAGACHILGNGGQPLDDVFRYVKSSDRLALACEMLKWRHM 396
Query: 243 APTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSS 302
APTAPDTL CYP++ +DP I+ P V+F GNQ +FET ++ R++ +P F +
Sbjct: 397 APTAPDTLWCYPYFSSDPFIMTKAPHVFFVGNQPRFETAIVDHGGGSKTRVVLLPRFSDN 456
Query: 303 RTVAILNLSTLECHSLVVEDLTEE 326
V ++N +TLE ++ ++ L E
Sbjct: 457 GEVILVNPATLEVKAVRMDCLWNE 480
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 8 DVYFTGNQSKFETKTIEIEK-------GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 60
++YF+ S + IE K G ++ V ++ D+ + E C I+GT++K LK
Sbjct: 43 NLYFS-RLSLLRKQVIERAKQQWRSAIGNAIFVNRILDIKKG--ERCWIVGTVYKEMPLK 99
Query: 61 PNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKG 119
N+L ++++E + P P F S D +LEDE R+PL G +D N VTG+++A+ G
Sbjct: 100 DNVLNDLAKEHGVEPPPPRLKFHSKEDMAVLEDESGRVPLGGEFLDSINIVTGLILAVLG 159
Query: 120 TPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVD 161
G+F V DVCY P +T L+ + K ++++VD
Sbjct: 160 VETTAGEFHVVDVCY--PGVAEQTPLAQHGTK----ATMDVD 195
>gi|154321061|ref|XP_001559846.1| hypothetical protein BC1G_01405 [Botryotinia fuckeliana B05.10]
Length = 447
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 28/223 (12%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
N + + +I VGN + Y FNP T + S+ + L+PG
Sbjct: 232 NSIASDLDSIAHDTVGNTRKAQKKYGYDASAFNPAPTTHFDNFLTELLPSLPITLLPGPS 291
Query: 168 DPANTTLPQQPLHPCLFPEASKY--------------STFHPVTNPYIFEMEGKLLMGTS 213
DPAN +LPQQP+HP +FP+A Y F VTNP+ E+EG ++GT
Sbjct: 292 DPANASLPQQPIHPAMFPQARAYCGSAPSVIGEEREAGWFDTVTNPWEGEIEGWRVLGTG 351
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ V D+ K+ + L ++E + YPF D DP II +CP ++F G
Sbjct: 352 GQNVDDVFKYVEGEDRLRMME--------------AMWSYPFQDADPFIINTCPHIFFAG 397
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
NQ F+T +IE + VRLIS+P F + + +L+ TLE
Sbjct: 398 NQPSFDTASIEGPDGQTVRLISIPSFEETGEIVLLDAETLEAE 440
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 65 KEISEELKLVPQPQHTHFVSDS-DELILEDELQRIPL-HGNIDIHNQVTGVVVAIKGTPV 122
+E+ + P P+ + D DE++LEDE R+ L G + VTG +VA+ GT
Sbjct: 78 EEVRKHWISAPPPRRKYLSGDGEDEIMLEDESGRLRLIGGQLSKELLVTGCIVAVMGTEN 137
Query: 123 GNGKFKVSDVCYAT-PVFNPRTTLSNNENK 151
NG F+V D+ P PR +S + +
Sbjct: 138 ANGDFEVVDIKVPDLPPQEPRWEISGEKEE 167
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNET 42
II +CP ++F GNQ F+T +IE G++V ++ + ET
Sbjct: 385 FIINTCPHIFFAGNQPSFDTASIEGPDGQTVRLISIPSFEET 426
>gi|448532815|ref|XP_003870507.1| Hys2 DNA polymerase III (delta) subunit [Candida orthopsilosis Co
90-125]
gi|380354862|emb|CCG24378.1| Hys2 DNA polymerase III (delta) subunit [Candida orthopsilosis]
Length = 477
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 106/197 (53%), Gaps = 21/197 (10%)
Query: 146 SNNENKYVNHSSIEVD-------------LMPGEFDPANTTLPQQPLHPCLFPEASKY-- 190
S N +KY N S ++D +MPGE DPA LPQQPLH LF
Sbjct: 280 SKNISKYNNESLKQLDQFINELIVTMPIAVMPGEHDPAEICLPQQPLHKSLFKSNQSVLG 339
Query: 191 -STFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTA 246
+TNP E ++GTSGQ V+D+ K+ + S+ L I+ +++ + PTA
Sbjct: 340 SERLSRLTNPTWIEASNVRMLGTSGQNVNDVKKYVTRQSDSDSLKIIRSSMKWQNFVPTA 399
Query: 247 PDTLACYPFYDNDPMIIES-CPDVYFTGNQSKFETKTIEI-EKDKNVRLISVPDFFSSRT 304
PDTL CYPF D DP + ES P VYF GNQ KF+T T + + VRLIS+P F S+
Sbjct: 400 PDTLYCYPFEDADPFVFESELPHVYFVGNQDKFQTDTYKCPDSGAQVRLISIPQFKSTGE 459
Query: 305 VAILNLSTLECHSLVVE 321
IL+L TLE + +E
Sbjct: 460 FIILDLDTLEVELVKIE 476
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE---LILEDELQRIPLHGN 103
C +IGT+F + K NIL ++ V + ++ D DE ++LEDE R LH N
Sbjct: 96 CWVIGTVFVDAKYKLNILNDVERGTDDVLPLEPVSYL-DGDEQPVVMLEDESGRAILH-N 153
Query: 104 IDIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
D Q VTG +VA+ G + G F++ DV Y P P+ LS+ + +
Sbjct: 154 EDFLQQNLLVTGCIVAVLGIEIQAGIFEIMDVAY--PECAPQRPLSSADTR 202
>gi|405118300|gb|AFR93074.1| DNA polymerase Delta [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ + L+PG DPA TLPQQPL LF +K TNP E+ G+ + T GQ
Sbjct: 321 SSLPIHLIPGPSDPAGATLPQQPLPKILFGGKAKTEGLECETNPTWMEVGGRSFLTTGGQ 380
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ DI K+ ++ L + + TL H+APTAPDTL YPF D DP I++ PDVY GNQ
Sbjct: 381 AIDDIFKYVPGNSRLAMTQRTLEWRHMAPTAPDTLWIYPFPDADPFILKYRPDVYIVGNQ 440
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+FET TI ++D RLI + F + +A + L TLEC +L E
Sbjct: 441 PEFET-TIIGDEDAPTRLILLSSFAKTGVLAFVCLETLECRTLEFE 485
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN T ++ C I+GT++ LKPNIL++++ + L T F S D + LEDE R+
Sbjct: 80 LNLTRSQLCYIVGTIYMEMPLKPNILEDMARDHWLAAPIPRTKFFSAQDSIHLEDESGRV 139
Query: 99 PLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP----VFNPRTTLSN 147
L G++ + VTGV++A G +G F+V D+C+A V NP +
Sbjct: 140 RLIGDVIQRERDREGGGLVTGVIMAALGMETPSGDFEVIDICFAGMPDKLVLNPGPPNAK 199
Query: 148 NENKYVNHSSIEV 160
+ K N I++
Sbjct: 200 GKGKVENDEDIDM 212
>gi|134058506|emb|CAL00715.1| unnamed protein product [Aspergillus niger]
Length = 516
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 30/190 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
S+ V LMPGE DPAN +LPQQ +H +FP+A Y F VTNP+ +
Sbjct: 313 SMPVTLMPGESDPANFSLPQQGIHRAMFPQARAYCAPPPAGEDKKEPGWFDSVTNPWEGD 372
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP--------------LDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V DI ++ N ++ + ++E LR PTAPDT
Sbjct: 373 VEGWRLWGSSGQNVDDILRYLNFADEEGNVADGAGDSEARMRVMEAMLRWRCGVPTAPDT 432
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKN---VRLISVPDFFSSRTVA 306
L YPF +DP +I++CP ++F GNQ +F+T IE + + + VRL+S+P F + +
Sbjct: 433 LWSYPFQTHDPFVIQTCPHIFFAGNQPQFKTAVIEDDDNTSGPRVRLLSIPKFKETGELV 492
Query: 307 ILNLSTLECH 316
+++ TLE
Sbjct: 493 LVDTETLEVE 502
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E + V + L+ E C + GT++ LKPNIL ++++E L P
Sbjct: 69 WEGFSIAGENARRVERV----LDVRQGELCWVAGTIYMDMPLKPNILDDLTKENYTLAPP 124
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSD 131
P+ T+ EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 125 PRPTYQDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVID 183
>gi|325181440|emb|CCA15856.1| DNA polymerase alpha/epsilon subunit B putative [Albugo laibachii
Nc14]
Length = 477
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VDLMPG DP+N +LPQQ H CL P +S YS+ VTNPY E+ +G +GQP
Sbjct: 293 TMRVDLMPGHSDPSNYSLPQQAFHECLLPNSSSYSSLRLVTNPYDAEVGNIRFLGHAGQP 352
Query: 217 VSDIAKFSN---------------LSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPM 261
V I + + N LD LE L H+APTAPD L+C+P +DP
Sbjct: 353 VESIMQSTGNGIQELDTCHPSKVAKDNVLDCLERCLLWNHLAPTAPDMLSCFPAAQDDPF 412
Query: 262 IIESCPDVYFTGNQSKFETKTIEIEKDKN-VRLISVPDF 299
I++ P V+F GNQ FET+ ++N VR++SVP F
Sbjct: 413 IVDEMPHVFFAGNQKHFETRMWNGAGNENGVRIVSVPSF 451
>gi|71021785|ref|XP_761123.1| hypothetical protein UM04976.1 [Ustilago maydis 521]
gi|46100573|gb|EAK85806.1| hypothetical protein UM04976.1 [Ustilago maydis 521]
Length = 510
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 13/179 (7%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S + V L+PGE DPA+ +PQQP+H L P + ++ + H TNP + + L+GTSGQ
Sbjct: 329 SVMPVHLLPGERDPASVAVPQQPIHFALLPRSGRFDSLHRHTNPAWISLGDRNLLGTSGQ 388
Query: 216 PVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K+ + S+ +++ TL GH+APTAPDTL CYPF DP ++++ PDV G
Sbjct: 389 NIDDIFKYVDESDDARIEMALRTLEWGHLAPTAPDTLWCYPFKSTDPFVLKNRPDVLIVG 448
Query: 274 NQSKFETKTIEIEKDKN-----------VRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
NQ + + + D + R++ VP+F + V LNL +LE + +E
Sbjct: 449 NQPAYASAVYRFDSDDDEQSQAPELQNGCRVVLVPEFAKTGQVVWLNLGSLETKLVCIE 507
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 33 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDELIL 91
V ++ D+ + D C ++G L+ LKP++L++++ E L PQP + +V DEL +
Sbjct: 101 VDRILDVRQGDI--CYVVGNLYCAMPLKPDVLEDLTREQWLAPQPVRSKYVDYAKDELFI 158
Query: 92 EDELQRIPL-----HGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
ED+ R+ L G + + +TGVV A+ GT G F V D +A+ P T
Sbjct: 159 EDQSGRVKLVGEAIRGGTALRSMLITGVVAAVLGTETRAGDFDVVDAVFASLPNQPSTKK 218
Query: 146 SNNENKYVNHSSIEVD----LMPG 165
S + H+ D LM G
Sbjct: 219 SLQDPSRTKHADASQDQWVVLMSG 242
>gi|302692486|ref|XP_003035922.1| hypothetical protein SCHCODRAFT_84485 [Schizophyllum commune H4-8]
gi|300109618|gb|EFJ01020.1| hypothetical protein SCHCODRAFT_84485 [Schizophyllum commune H4-8]
Length = 504
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 128 KVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA 187
K Y F+P TLS + S+ + L+PG DP+ +PQQPL +F
Sbjct: 264 KARRFGYDATTFSPHPTLSLSATLLDIGRSMPIHLLPGANDPSGAIMPQQPLPRRMFGMV 323
Query: 188 SKYSTFHPVTNPYIFEMEG----KLLMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCGH 241
SK STF TNP ++ + L+ SGQP+ D+ K+ S + L I E TLR H
Sbjct: 324 SKLSTFKCETNPTFIDLAAGPRKRQLLVHSGQPLDDMFKYLPSPPARRLGIAEATLRWRH 383
Query: 242 VAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFS 301
+APTAPDTL C+PF+ +P ++++ PD+Y GNQ KF T+ + D R++ VP F S
Sbjct: 384 MAPTAPDTLWCHPFFHAEPFVLQNTPDLYIIGNQKKFATR-LAGPSDGQCRIVLVPQFSS 442
Query: 302 SRTVAILNLSTLECHSLVVE 321
+ V ++N+ TL+ ++ ++
Sbjct: 443 TGMVVLVNMRTLKVKTVTLK 462
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-NID 105
C ++GT++ LKP+++++I+ + + P P S D ++LEDE RI L G +
Sbjct: 85 CYVVGTVYMEMPLKPSVMEDIARDHSIAPPPPPPKICSKEDHVMLEDESGRIRLVGARVT 144
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
VTGV++ G NG F+V D+CYA
Sbjct: 145 AAPLVTGVIIGALGVETPNGDFEVVDICYA 174
>gi|342866430|gb|EGU72091.1| hypothetical protein FOXB_17335 [Fusarium oxysporum Fo5176]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 85/145 (58%), Gaps = 11/145 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-----------FHPVTNPYIFEME 205
SI + ++PG DPAN + PQQP+HP +FP A Y+ F VTNP+ E+E
Sbjct: 326 SIPITMLPGAQDPANASYPQQPVHPAMFPSARAYARDPAAPATQPGWFDTVTNPWEAELE 385
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G +GT GQ V D+ K+ + L ++E R APTAPDTL YPF D+DP ++++
Sbjct: 386 GWRFLGTGGQNVDDVFKYVGSDDRLGMMEAMCRWRCCAPTAPDTLWSYPFQDDDPFVMQT 445
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKN 290
CP +YF GNQ F TK I + +N
Sbjct: 446 CPHLYFVGNQPHFTTKVIHGPEGQN 470
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDELQR 97
L+ E C + GT++ LKPNIL+++S++ + + P T + S D+++LEDE R
Sbjct: 88 LDVRQGELCWVTGTVYMEMPLKPNILEDVSKD-RWISAPILTPKYFSKDDQVMLEDESGR 146
Query: 98 IPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
I L G++ N VTG ++ + GT NG+ +V D+ +
Sbjct: 147 IRLVGDVLKTVNLVTGCIIGVMGTENANGELEVIDIKF 184
>gi|302418784|ref|XP_003007223.1| DNA polymerase subunit delta-2 [Verticillium albo-atrum VaMs.102]
gi|261354825|gb|EEY17253.1| DNA polymerase subunit delta-2 [Verticillium albo-atrum VaMs.102]
Length = 497
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 28/196 (14%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------FHPVTNPYIFEMEGK 207
SI + L+PG DPAN + PQQP+H +FP+A +S F TNP+ E++G
Sbjct: 302 SIPITLLPGAQDPANASYPQQPIHTAMFPKARPWSVNPDTNEAGWFDNTTNPWEGEIDGW 361
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTL--------AC------- 252
++GT GQ V D+ K+ + + L ++E R APTAPDTL AC
Sbjct: 362 RVLGTGGQNVDDVFKYIDSEDRLGMMEAMCRWRCSAPTAPDTLCEFPPSDMACRDTIADA 421
Query: 253 ----YPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAIL 308
YPF D+DP +I+S P +YF G Q +F TK I+ + + +RLI+VP F ++ + ++
Sbjct: 422 AAGSYPFQDDDPFVIKSAPHLYFVGCQPEFSTKVIQGPEGQQIRLITVPSFSETKELVLV 481
Query: 309 NLSTLECHSLVVEDLT 324
+ TLE + + T
Sbjct: 482 DTETLEVSKVRISTAT 497
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT---HFVSDSDELILEDEL 95
L+ E C + GT++ +LKPNIL+++S++ + + P T + D D++++ED+
Sbjct: 87 LDVRQGELCWVAGTIYMEMRLKPNILEDVSKD-RWISAPVSTEKYYSEDDQDQVMIEDDS 145
Query: 96 QRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
RI L G++ N VTG V+A+ G+ NG+ +V D+ +A
Sbjct: 146 GRIRLVGDVLKTVNLVTGCVIAVMGSENANGELEVIDIKFA 186
>gi|340914791|gb|EGS18132.1| DNA polymerase delta small subunit-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 526
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 30/222 (13%)
Query: 129 VSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEAS 188
V Y + FNP + ++ ++ V L+PG DPA + PQQP+H +FP A
Sbjct: 302 VKKYGYDSSSFNPLPSQLLDQFLSTLLPTMPVTLLPGILDPATASYPQQPIHSAMFPRAR 361
Query: 189 KYST------------------------------FHPVTNPYIFEMEGKLLMGTSGQPVS 218
+ F VTNP+ E+EG +GT GQ +
Sbjct: 362 TFGPTPKPPPPPPPPGKEAEAAQQEMQEEKEPGWFDAVTNPWEGEIEGWRFLGTGGQNLD 421
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
DI K+ + + L ++E R APTAPDTL YPF +++P + CP VYF G Q +F
Sbjct: 422 DICKYIDSEDRLGMMEAMCRWRCTAPTAPDTLWAYPFQEDEPFTMLECPHVYFIGCQPQF 481
Query: 279 ETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVV 320
T+ IE + + VRLI VP F S+R + +++ TLE ++ +
Sbjct: 482 GTRVIEGPQGQTVRLILVPSFASTREIVLVDAETLEVSTVKI 523
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDE---LILEDELQRIPLHG 102
C ++GT++ LKP++L++IS++ + + P T H+ D ++LED+ RI L G
Sbjct: 97 CWMVGTVYMDMPLKPSVLEDISKD-RWIGNPITTGHYFQDDGSGTTIMLEDDSGRIRLVG 155
Query: 103 N-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ + VTG ++A+ GT NG+F+V D+ +A
Sbjct: 156 SRLQDFFLVTGCIIAVLGTENVNGEFEVIDLKFA 189
>gi|365984701|ref|XP_003669183.1| hypothetical protein NDAI_0C02800 [Naumovozyma dairenensis CBS 421]
gi|343767951|emb|CCD23940.1| hypothetical protein NDAI_0C02800 [Naumovozyma dairenensis CBS 421]
Length = 471
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Query: 151 KYVNHS--SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYI 201
K++ +S SI +DLMPG DP+ LPQQP + LF EA + + VTNPY
Sbjct: 277 KFLGNSLQSISIDLMPGVKDPSARALPQQPFNKALFSEALRPYFDKVNNKLLNLVTNPYQ 336
Query: 202 FEMEGKLLMGTSGQPVSDIAKF--------------SNLSNPLDILEYTLRCGHVAPTAP 247
F + L+ SGQ V+DI K+ ++ + LD++E T++ ++APTAP
Sbjct: 337 FNINDVDLLTVSGQSVNDIHKYVIPMKNNSLDETPKEDIEHRLDLMECTMKWQNIAPTAP 396
Query: 248 DTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAI 307
DT+ CYPF + DP +++ P VY NQ ++ T+ + + NV++ISVP+F + +V +
Sbjct: 397 DTVWCYPFKEEDPFVLKEWPHVYIVANQPEYGTRDLTLNDGVNVKIISVPEFSKTGSVIL 456
Query: 308 LNLSTLECHSLVVE 321
L+L+ LE + +E
Sbjct: 457 LDLNNLESEVVTIE 470
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 27 KGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSD 85
KG+SV + K L+ E C IGT++ + KPNIL+E++ + P ++ +
Sbjct: 77 KGRSV-IKKEKVLDIQGNEPCWCIGTIYCEMKYKPNILEEVTNDTYGAPDIVKSYTDLEG 135
Query: 86 SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTT 144
SDE++LEDE R+ L G+ I +TG V+ I G G F+V D+CY P P+
Sbjct: 136 SDEIMLEDESGRVLLVGDYIRSTPFITGTVIGILGMEADAGTFQVLDICY--PAALPQKP 193
Query: 145 LSNNENK 151
L ++N+
Sbjct: 194 LLLDKNR 200
>gi|145480785|ref|XP_001426415.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393490|emb|CAK59017.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEA---SKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
V +MPG +P + PQ PLH FPE+ SK F +TNP F + ++GTSGQ
Sbjct: 296 VAIMPGVNEPVSQMFPQTPLHRSFFPESLEKSKQLIF--LTNPSEFSLGELKVLGTSGQN 353
Query: 217 VSDIAKFSNLSNP--LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
+ DI K S + + +D+LE TL GH+APTAPDTL YP DP ++ P++YF GN
Sbjct: 354 IQDIKKCSLIKDQSDVDLLEMTLFYGHIAPTAPDTLISYPQQKQDPFVLSELPNIYFAGN 413
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
SKF TK +NVR++SVP F + T+ ++NL TLEC
Sbjct: 414 MSKFGTKI----AAENVRIVSVPAFSETGTICLINLHTLEC 450
>gi|392867633|gb|EAS29117.2| DNA polymerase delta subunit 2 [Coccidioides immitis RS]
Length = 559
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 102/197 (51%), Gaps = 39/197 (19%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------------FHPVTNPYI 201
SI V +MPGE DPAN LPQQ +H + P + Y + VTNP+
Sbjct: 336 SIPVTIMPGENDPANFALPQQEIHRAMLPRSRNYCSAPRLGIDEPPSEPGWLDTVTNPWQ 395
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSN-------------PLDILEYTLRCGHVAPTAPD 248
++EG L G SGQ V D+ ++ L + L ++E LR PTAPD
Sbjct: 396 GDVEGWRLWGCSGQNVDDVLRYMYLDDDQTGNGQDIEGDTRLRLMEAMLRWRCAVPTAPD 455
Query: 249 TLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE---------IEKDK--NVRLISVP 297
T+ CYPF DNDP ++++CP V+FTGNQ F T IE IE D+ VRL+++P
Sbjct: 456 TIWCYPFQDNDPFVLQACPHVFFTGNQPAFRTTVIEKSVSASSMDIEGDQPSKVRLLALP 515
Query: 298 DFFSSRTVAILNLSTLE 314
F + + +L+ TLE
Sbjct: 516 KFRETGELVLLDAETLE 532
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 22 TIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH 81
TI E + V + L+ E C ++GT++ LKPNIL +IS+E P
Sbjct: 77 TIAGENARRVDRV----LDVRQGELCWVVGTVYMDLPLKPNILDDISKEHWTAAPPSRKT 132
Query: 82 FVSDSD----ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
++ S+ + +LED R+ L G + VTG VVA+ GT NG F+V DV
Sbjct: 133 YLDPSNQGGTQTMLEDGSGRLRLTGTLLQSALLVTGAVVAVLGTENANGDFEVVDV--KV 190
Query: 137 PVFNPRTTLSNNENKYVNHSSIEVDLMPGE 166
P P+ + E++Y + +S + P E
Sbjct: 191 PDLAPQP--ARWESQYADSASGKRKRSPSE 218
>gi|449015469|dbj|BAM78871.1| DNA polymerase delta, subunit B [Cyanidioschyzon merolae strain
10D]
Length = 425
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEAS----KYSTFHPVTNPYIFEMEGKLLMGTS 213
+ VDLMPGE DP + PQQP H L P+++ + +NP+ F++ G L +GTS
Sbjct: 253 VPVDLMPGEEDPVHAAFPQQPWHRLLLPQSASQDDAQNRLVRCSNPHAFQINGCLFLGTS 312
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ V + +FS + N L+ L+ L CGH+APT PDT+AC P D+DP++I P V FTG
Sbjct: 313 GQNVKNFCRFSRVRNELEALQRLLECGHLAPTCPDTMACVPRGDHDPLVIREVPHVLFTG 372
Query: 274 NQSKFETKTIEIEKDKN------VRLISVPDFFSSRTVAILNLSTL 313
N F + +N V L++VP F ++ T +L L L
Sbjct: 373 NADTFRYQQRVFGAARNAGTAAPVTLLTVPRFDATGTAVLLALPEL 418
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDEL 89
++ + +S LN T+ ++G +FK LKP+ILK ++++ L VP+ + ++ S D +
Sbjct: 68 ITRVAISQLNPVQTQW--VVGIIFKQMPLKPSILKSYADDIMLTVPELRLLNYTSGDDRV 125
Query: 90 ILEDELQRIP--LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
+EDE RI H H+ VTG+V+A++G +G F+V+++
Sbjct: 126 YVEDETGRIECVFHPEDRKHDVVTGMVIALQGLVGADGLFRVNEI 170
>gi|355712614|gb|AES04407.1| polymerase , delta 2, regulatory subunit 50kDa [Mustela putorius
furo]
Length = 382
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 75/95 (78%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VD+MPGEFDP N TLPQQPLHPC+FP A+ YST VTNPY ++G +GTSGQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 347
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTL 250
VSDI ++S++ + L+ILE+TLR H++PTAPDTL
Sbjct: 348 NVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GGGVQVKKLCELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G++D VTG V+A+ G+ +GKF V D C+A
Sbjct: 132 ELVLEDELQRIRLEGDVDASRLVTGTVLAVLGSARDSGKFVVEDHCFA 179
>gi|119177185|ref|XP_001240404.1| hypothetical protein CIMG_07567 [Coccidioides immitis RS]
Length = 542
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 102/197 (51%), Gaps = 39/197 (19%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------------FHPVTNPYI 201
SI V +MPGE DPAN LPQQ +H + P + Y + VTNP+
Sbjct: 319 SIPVTIMPGENDPANFALPQQEIHRAMLPRSRNYCSAPRLGIDEPPSEPGWLDTVTNPWQ 378
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSN-------------PLDILEYTLRCGHVAPTAPD 248
++EG L G SGQ V D+ ++ L + L ++E LR PTAPD
Sbjct: 379 GDVEGWRLWGCSGQNVDDVLRYMYLDDDQTGNGQDIEGDTRLRLMEAMLRWRCAVPTAPD 438
Query: 249 TLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE---------IEKDK--NVRLISVP 297
T+ CYPF DNDP ++++CP V+FTGNQ F T IE IE D+ VRL+++P
Sbjct: 439 TIWCYPFQDNDPFVLQACPHVFFTGNQPAFRTTVIEKSVSASSMDIEGDQPSKVRLLALP 498
Query: 298 DFFSSRTVAILNLSTLE 314
F + + +L+ TLE
Sbjct: 499 KFRETGELVLLDAETLE 515
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD----ELILEDELQRIPL 100
E C ++GT++ LKPNIL +IS+E P ++ S+ + +LED R+ L
Sbjct: 79 ELCWVVGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQGGTQTMLEDGSGRLRL 138
Query: 101 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIE 159
G + VTG VVA+ GT NG F+V DV P P+ + E++Y + +S +
Sbjct: 139 TGTLLQSALLVTGAVVAVLGTENANGDFEVVDV--KVPDLAPQP--ARWESQYADSASGK 194
Query: 160 VDLMPGE 166
P E
Sbjct: 195 RKRSPSE 201
>gi|354543385|emb|CCE40104.1| hypothetical protein CPAR2_101420 [Candida parapsilosis]
Length = 477
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 27/200 (13%)
Query: 146 SNNENKYVNHSSIEVD-------------LMPGEFDPANTTLPQQPLHPCLFP------E 186
S N +KY N S ++D +MPG+ DPA +PQQPLH LF E
Sbjct: 280 SKNISKYNNESLKQLDQFINDLIVTMPISVMPGDHDPAEICIPQQPLHKSLFKTNRAILE 339
Query: 187 ASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNL---SNPLDILEYTLRCGHVA 243
+ + S +TNP E++ ++GTSGQ V+D+ K+ S+ L +++ +++ +
Sbjct: 340 SDRLSR---LTNPTWLELDKVRMLGTSGQNVNDVKKYVTREADSDSLKVMKSSMKWQNFV 396
Query: 244 PTAPDTLACYPFYDNDPMIIES-CPDVYFTGNQSKFETKTIEI-EKDKNVRLISVPDFFS 301
PTAPDTL CYPF ++DP I ES P VYF GNQ KFET + + VRLIS+P F +
Sbjct: 397 PTAPDTLYCYPFDNSDPFIFESELPHVYFVGNQDKFETDVYKCPDSGAQVRLISIPQFKA 456
Query: 302 SRTVAILNLSTLECHSLVVE 321
+ IL+L+TLE + +E
Sbjct: 457 TGEFVILDLNTLEVELVRIE 476
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGNI 104
C +IGT+F + K NIL ++ + V + ++SDS++ ++LEDE R LH +
Sbjct: 96 CWVIGTVFVDAKYKLNILNDVEKGTDDVLPLEPVSYLSDSEQPVVMLEDESGRAILHNDE 155
Query: 105 DIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
+ + VTG +VA+ G + G F++ DV Y P P+ LSN E +
Sbjct: 156 FLQHNLLVTGCIVAVLGIEIQAGIFEIMDVAY--PECAPQKPLSNGETR 202
>gi|397571779|gb|EJK47956.1| hypothetical protein THAOC_33287 [Thalassiosira oceanica]
Length = 533
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 27/195 (13%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEM------EGKL 208
S I +D +PG DP N PQ+P+H CL P A YS +F TNPY ++ G
Sbjct: 338 SGIPLDYIPGMHDPTNANWPQRPIHSCLLPNACGYSKSFGRPTNPYEGQLTVEGESSGVR 397
Query: 209 LMGTSGQPVSDIAKF------------SNLSNP---LDILEYTLRCGHVAPTAPDTLACY 253
++GT G ++D+ ++ + S P +D L TLR GH+APT P +L +
Sbjct: 398 VLGTDGLNIADLRRYLATRSDESGEGEGDTSEPASCIDALNQTLRYGHIAPTGPSSLPTF 457
Query: 254 PFYDNDPMIIESCPDVYFTGNQSKFETKTI-----EIEKDKNVRLISVPDFFSSRTVAIL 308
P YD+DP +++S PD+YF GN FET+ I E ++ RLI VP+F + V ++
Sbjct: 458 PAYDSDPFVLKSRPDIYFAGNCHSFETRMIDDNCNEAKEGGKTRLICVPNFALTGEVVLV 517
Query: 309 NLSTLECHSLVVEDL 323
L +LEC + D
Sbjct: 518 KLHSLECEVIEFNDW 532
>gi|190346775|gb|EDK38941.2| hypothetical protein PGUG_03039 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 15/181 (8%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS---TFHPVTNPYIFEMEGKLLMGT 212
SS+ V +MPGE DP LPQQPLH +FP +Y+ TNP E+ G ++GT
Sbjct: 300 SSVPVSVMPGEDDPTEICLPQQPLHRSIFPSTKRYANGPNLQYRTNPTWLEVNGIRMLGT 359
Query: 213 SGQPVSDIAKF--SNLSNP---LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESC 266
+G+ V+DI K+ +L+ P +DI+ ++ + PTAPDTL CYPF D+DP + +
Sbjct: 360 AGENVNDICKYLPESLTTPESTIDIMRANIKWQNFTPTAPDTLYCYPFKDSDPFTLSDET 419
Query: 267 PDVYFTGNQSKFETKTIEIEKDKN------VRLISVPDFFSSRTVAILNLSTLECHSLVV 320
P +YF GNQ KFE+ ++D N V+L+S+P F ++ V +++ L + + +
Sbjct: 420 PHLYFVGNQEKFESAEFRAQRDHNSDDEVTVQLVSIPKFATTGQVVLVDTGDLSTNVVRI 479
Query: 321 E 321
+
Sbjct: 480 D 480
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDE-LILEDELQRIPLHG 102
E C + GT+F K NILK++ + ++P+ + ++ D L+LED+ R LH
Sbjct: 93 EMCWVSGTIFSDMNNKQNILKDVENGVDDVLPKAKQSYVSGDVPPVLMLEDDSGRAILHN 152
Query: 103 NIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
+ + VTG VA+ G V G F++ DV Y PV +P+ L
Sbjct: 153 DDFLKKNLLVTGCFVAVLGIEVQAGIFEILDVVY--PVISPQLPL 195
>gi|303316123|ref|XP_003068066.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107742|gb|EER25921.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320032434|gb|EFW14387.1| DNA polymerase delta subunit 2 [Coccidioides posadasii str.
Silveira]
Length = 559
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 102/199 (51%), Gaps = 39/199 (19%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------------FHPVTNPYI 201
SI V +MPGE DPAN LPQQ +H + P + Y + VTNP+
Sbjct: 336 SIPVTIMPGENDPANFALPQQEIHRAMLPRSRNYCSAPRLGIDEPPSEPGWLDTVTNPWQ 395
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSN-------------PLDILEYTLRCGHVAPTAPD 248
++EG L G SGQ V D+ ++ +L + L ++E LR PTAPD
Sbjct: 396 GDVEGWRLWGCSGQNVDDVLRYMSLDDDQTENGQDIEGDTRLRLMEAMLRWRCAVPTAPD 455
Query: 249 TLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE---------IEKDK--NVRLISVP 297
T+ CYPF D DP ++++CP V+FTGNQ F T IE +E D+ VRL+++P
Sbjct: 456 TIWCYPFQDKDPFVLQACPHVFFTGNQPAFRTTVIEKSVSASSMDVEGDQPSKVRLLALP 515
Query: 298 DFFSSRTVAILNLSTLECH 316
F + + +L+ TLE
Sbjct: 516 KFRETGELVLLDAETLEVE 534
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 22 TIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH 81
TI E + V + L+ E C ++GT++ LKPNIL +IS+E P
Sbjct: 77 TIAGENARRVDRV----LDVRQGELCWVVGTVYMDLPLKPNILDDISKEHWTAAPPSRKT 132
Query: 82 FVSDSD----ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
++ S+ + +LED R+ L G + VTG VVA+ GT NG F+V DV
Sbjct: 133 YLDPSNQGGTQTMLEDGSGRLRLTGTLLQSALLVTGAVVAVLGTENANGDFEVVDV--KV 190
Query: 137 PVFNPRTTLSNNENKYVNHSSIEVDLMPGE 166
P P+ + E++Y + +S + P E
Sbjct: 191 PDLAPQP--ARWESQYADSASGKRKRSPSE 218
>gi|146418689|ref|XP_001485310.1| hypothetical protein PGUG_03039 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 15/181 (8%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS---TFHPVTNPYIFEMEGKLLMGT 212
SS+ V +MPGE DP LPQQPLH +FP +Y+ TNP E+ G ++GT
Sbjct: 300 SSVPVSVMPGEDDPTEICLPQQPLHRSIFPSTKRYANGPNLQYRTNPTWLEVNGIRMLGT 359
Query: 213 SGQPVSDIAKF--SNLSNP---LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESC 266
+G+ V+DI K+ +L+ P +DI+ ++ + PTAPDTL CYPF D+DP + +
Sbjct: 360 AGENVNDICKYLPESLTTPESTIDIMRANIKWQNFTPTAPDTLYCYPFKDSDPFTLSDET 419
Query: 267 PDVYFTGNQSKFETKTIEIEKDKN------VRLISVPDFFSSRTVAILNLSTLECHSLVV 320
P +YF GNQ KFE+ ++D N V+L+S+P F ++ V +++ L + + +
Sbjct: 420 PHLYFVGNQEKFESAEFRAQRDHNSDDEVTVQLVSIPKFATTGQVVLVDTGDLSTNVVRI 479
Query: 321 E 321
+
Sbjct: 480 D 480
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDE-LILEDELQRIPLHG 102
E C + GT+F K NILK++ + ++P+ + ++ D L+LED+ R LH
Sbjct: 93 EMCWVSGTIFLDMNNKQNILKDVENGVDDVLPKAKQSYVSGDVPPVLMLEDDSGRAILHN 152
Query: 103 NIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
+ + VTG VA+ G V G F++ DV Y PV +P+ L
Sbjct: 153 DDFLKKNLLVTGCFVAVLGIEVQAGIFEILDVVY--PVISPQLPL 195
>gi|50285409|ref|XP_445133.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524436|emb|CAG58033.1| unnamed protein product [Candida glabrata]
Length = 479
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 107/195 (54%), Gaps = 32/195 (16%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPE-ASKY------STFHPVTNPYIFEMEGKLL 209
SI +D+MPG DP++ TLPQQPLH LF E +Y + + VTNPY+F + G L
Sbjct: 283 SISIDIMPGANDPSDRTLPQQPLHKALFRENLGQYFDKVNANLLNLVTNPYVFSINGLEL 342
Query: 210 MGTSGQPVSDIAKF-----------SNLSNP-------------LDILEYTLRCGHVAPT 245
+ T+GQ ++DI K+ +N+S LD++E TL+ ++APT
Sbjct: 343 LTTAGQNITDICKYVIPAKSDTESTTNVSTDDTDAKCAKTTEHILDLMECTLKWQNIAPT 402
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTV 305
APDTL CYP+ D DP I+ P VY GNQ F T+ + ++ V +ISVP F + +
Sbjct: 403 APDTLWCYPYKDRDPFILNKWPHVYIVGNQPYFGTRKVSLDG-VEVVMISVPTFSETGQI 461
Query: 306 AILNLSTLECHSLVV 320
+L+L L + +
Sbjct: 462 VLLDLEDLSTEVVTI 476
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL--KLVPQPQHTHFVSD 85
GK V V K + L+ E C IGT+++ + KPN+L+E+ + + P+
Sbjct: 79 GKEV-VEKKNVLDIQGKEPCWCIGTIYREMKYKPNVLEEVMNDTYGTVDINPESYTDPDG 137
Query: 86 SDELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
+DE++LEDE R+ L G++ +TG V+ + G G F+V D+CY
Sbjct: 138 TDEIMLEDESGRLILVGDMIAETPFITGTVIGVLGMEADAGTFQVLDLCY 187
>gi|296807268|ref|XP_002844189.1| DNA polymerase subunit delta-2 [Arthroderma otae CBS 113480]
gi|238843672|gb|EEQ33334.1| DNA polymerase subunit delta-2 [Arthroderma otae CBS 113480]
Length = 549
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 102/194 (52%), Gaps = 39/194 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------------STFHPVTNPYI 201
SI V LMPGE DPAN +LPQQ +H + P++ Y VTNP+
Sbjct: 332 SIPVTLMPGETDPANFSLPQQEIHTAMLPQSKAYCAPIAPRREALLAEPGWLDSVTNPWE 391
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTL--RCGHVAPTA 246
++EG GTSGQ V D+ ++ + L I++Y L RCG PTA
Sbjct: 392 GDIEGWRFWGTSGQNVDDVLRYVDTEELEGEEDEDVQNGVRLRIMDYMLKWRCG--VPTA 449
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE----IEKDKN---VRLISVPDF 299
PDT+ CYPF D DP +I+SCP V+FTGNQ F++ IE D N VRLI++P F
Sbjct: 450 PDTIWCYPFQDKDPFVIQSCPHVFFTGNQPHFQSSIIEGGDWGSGDDNITKVRLIALPKF 509
Query: 300 FSSRTVAILNLSTL 313
+ + +L+ TL
Sbjct: 510 HETGEIVLLDSETL 523
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKL 73
+S +E I E + V + L+ E ++GT++ LKP+I+ +IS+E
Sbjct: 68 KSAWEGYNIAGEYARRVDRV----LDVRQGELSWVVGTVYMELPLKPSIMDDISKENWTA 123
Query: 74 VPQPQHTHFVSDSD---ELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKV 129
P PQ T+ +S + ++EDE R+ L G++ VTGVVVA+ GT +G+F+V
Sbjct: 124 APIPQKTYNDPNSTKPTQTMVEDESGRLVLTGSLLQSSFLVTGVVVAVLGTENADGEFEV 183
Query: 130 SDV 132
D+
Sbjct: 184 VDI 186
>gi|451998402|gb|EMD90866.1| hypothetical protein COCHEDRAFT_1194606 [Cochliobolus
heterostrophus C5]
Length = 519
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 11/169 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-----------TFHPVTNPYIFEME 205
++ + ++PG DPAN LPQQPLHP LFP Y+ F VTNP+ +++
Sbjct: 316 TLPITMLPGASDPANVALPQQPLHPALFPNTRLYAEPPIASNETLNGFDAVTNPWTGDID 375
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
G ++ T GQ V D+ K+ +D +E LR VAPTAPDTL CYPF D+DP+++
Sbjct: 376 GYRVLSTGGQTVKDLLKYFEHVKSVDAMEMMLRWRCVAPTAPDTLWCYPFQDHDPLMLTE 435
Query: 266 CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
CP +Y G Q KF+ K I+ + V ++SVP F ++ + ++++ + +
Sbjct: 436 CPHMYIAGCQKKFDKKIIKDPAGQKVLIVSVPKFRTTGKIVLVDMESWD 484
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 4 ESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
E+ + G ++ F + +++ +G E C ++GT++ KPN+
Sbjct: 69 EAWHNFELGGQKASFVDRVLDVRQG----------------ELCWVVGTVYMEMAQKPNV 112
Query: 64 LKEISEELKLVPQPQHTHFVSDS--DELILEDELQRI-----PLHGNIDIHNQVTGVVVA 116
L +I ++ + PQ ++S S DE++LEDE R+ PLHG+ VTG ++A
Sbjct: 113 LDDIGKDHWIADPPQRDTYISPSGGDEMMLEDESGRLRVTGEPLHGHF-----VTGCILA 167
Query: 117 IKGTPVGNGKFKV-SDVCYATPVFNPR 142
GT +G FKV + C P PR
Sbjct: 168 ALGTEEADGTFKVIATQCADLPRQPPR 194
>gi|358366085|dbj|GAA82706.1| DNA polymerase delta subunit 2 [Aspergillus kawachii IFO 4308]
Length = 532
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 47/205 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
S+ V LMPGE DPAN +LPQQ +H +FP+A Y S F VTNP+ +
Sbjct: 312 SMPVTLMPGESDPANFSLPQQGIHRAMFPQARAYCAPPPAGDNKQEPSWFDSVTNPWEGD 371
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP--------------LDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V DI ++ N ++ + ++E LR PTAPDT
Sbjct: 372 VEGWRLWGSSGQNVDDILRYLNFADEEGNVADGAGDIEARMRVMEAMLRWRCGVPTAPDT 431
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK---------------DKN---- 290
L YPF +DP +I++CP ++F GNQ +F+T IE + D N
Sbjct: 432 LWSYPFQTHDPFVIQTCPHIFFAGNQPQFKTAVIEGDAPLKLNGADTEMTGTDDDNTSGP 491
Query: 291 -VRLISVPDFFSSRTVAILNLSTLE 314
VRL+S+P F + + +++ TLE
Sbjct: 492 RVRLLSIPKFKETGELVLVDTETLE 516
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E + V + L+ E C + GT++ LKPNIL ++++E L P
Sbjct: 68 WEGFSIAGENARRVERV----LDVRQGELCWVAGTIYMDMPLKPNILDDLTKENYTLAPP 123
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 124 PRPTYQDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVIDT 183
>gi|327304261|ref|XP_003236822.1| DNA polymerase delta subunit [Trichophyton rubrum CBS 118892]
gi|326459820|gb|EGD85273.1| DNA polymerase delta subunit [Trichophyton rubrum CBS 118892]
Length = 552
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 109/212 (51%), Gaps = 43/212 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------------STFHPVTNPYI 201
SI V LMPGE DPAN +LPQQ +H + P + Y VTNP+
Sbjct: 335 SIPVTLMPGETDPANFSLPQQEIHTAMLPRSKAYCPPIAPKRQALPSEPGWLDNVTNPWE 394
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNL-------------SNPLDILEYTL--RCGHVAPTA 246
++EG GTSGQ V D+ ++ NL L ++E+ L RCG PTA
Sbjct: 395 GDIEGWRFWGTSGQNVDDVLRYVNLEELEDDEVEDIENGARLKLMEHLLKWRCG--VPTA 452
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE-----IEKDK--NVRLISVPDF 299
PDT+ CYP+ D DP +I+SCP V+FTGNQ +F++ IE +D VRLI++P F
Sbjct: 453 PDTIWCYPYQDKDPFVIQSCPHVFFTGNQPRFQSTIIEGGDWGTAEDSITKVRLIALPKF 512
Query: 300 FSSRTVAILNLSTLECH----SLVVEDLTEER 327
+ + +L+ TL V +D T E+
Sbjct: 513 HETGEIVLLDTETLAIEVVKFGTVTKDGTTEK 544
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 49 IIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILEDELQRIPLHGNI 104
I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++EDE R+ L G++
Sbjct: 98 IVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVEDESGRLVLTGSL 157
Query: 105 DIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
VTGVVVA+ GT +G+F+V D+
Sbjct: 158 LQSTFLVTGVVVAVLGTENADGQFEVVDI 186
>gi|425765731|gb|EKV04389.1| DNA polymerase delta subunit 2, putative [Penicillium digitatum
Pd1]
gi|425777618|gb|EKV15778.1| DNA polymerase delta subunit 2, putative [Penicillium digitatum
PHI26]
Length = 544
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 131/269 (48%), Gaps = 49/269 (18%)
Query: 94 ELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFN--PRTTLSNNENK 151
++ R+ + GN + V G V +I K + Y +N P T L N +
Sbjct: 265 KISRLIIAGN-SLGASVIGDVASISSGDAAAKKAQPKKYGYDASAYNAAPITQLDNFLAE 323
Query: 152 YVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-------------FHPVTN 198
+ SI + LMPGE DPAN +LPQQ +H +FP+A YS F VTN
Sbjct: 324 IL--PSIPITLMPGEKDPANFSLPQQGIHRTMFPQARAYSAPPVRGDETPEVGWFDSVTN 381
Query: 199 PYIFEMEGKLLMGTSGQPVSDIAKFSNL----SNP---------LDILEYTLRCGHVAPT 245
P+ ++EG L G SGQ V D+ ++ ++ S P + I+E LR PT
Sbjct: 382 PWDGDVEGWRLWGCSGQNVDDVLRYISIEDGDSTPDKEKDSDDRMRIMEAMLRWRCGVPT 441
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE------IEKD----------- 288
APDTL YP+ +DP +IESCP ++F GNQ +F+T TIE ++ D
Sbjct: 442 APDTLWSYPYQSDDPFVIESCPHIFFAGNQPQFKTATIEGDTPLRLDGDTEMVGAADGSD 501
Query: 289 -KNVRLISVPDFFSSRTVAILNLSTLECH 316
VRL+++P F + + +++ TLE
Sbjct: 502 AARVRLLALPKFSETGELILVDTETLEVE 530
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD----ELILED 93
L+ E C + GT++ H LKPNIL+++S+E P P+ T + SD ++++ED
Sbjct: 91 LDVRQGELCWVAGTVYMHLPLKPNILEDLSKENFTSAPPPRRT-YTDPSDPSLTQIMMED 149
Query: 94 ELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
E R+ L GN Q+ TG ++A GT NG F+V D+
Sbjct: 150 ESGRLRLTGNFLQSTQLATGAIIAALGTENANGDFEVIDI 189
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MIIESCPDVYFTGNQSKFETKTIE 24
+IESCP ++F GNQ +F+T TIE
Sbjct: 457 FVIESCPHIFFAGNQPQFKTATIE 480
>gi|119500938|ref|XP_001267226.1| DNA polymerase delta subunit 2, putative [Neosartorya fischeri NRRL
181]
gi|119415391|gb|EAW25329.1| DNA polymerase delta subunit 2, putative [Neosartorya fischeri NRRL
181]
Length = 554
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 44/204 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LMPGE DPAN LPQQ +H +FP A Y F VTNP+ +
Sbjct: 337 SIPVTLMPGESDPANFALPQQGIHRAMFPRARAYCAPPPSGEETPEPGWFDSVTNPWEGD 396
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG L G+SGQ V D+ ++ + ++ + I+E LR PTAPDT+
Sbjct: 397 VEGWRLWGSSGQNVDDVLRYLDFADRDALDAGDGDIEARMRIMEAMLRWRCGVPTAPDTI 456
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIE------------------KDKNVR 292
YPF NDP +++SCP ++F GNQ +F+T +E + VR
Sbjct: 457 WSYPFQTNDPFVMQSCPHIFFAGNQPRFKTAVLEGDSPLRLKGADTKMTDAAENAGARVR 516
Query: 293 LISVPDFFSSRTVAILNLSTLECH 316
L+S+P F + + ++N TLE
Sbjct: 517 LLSIPKFKETGELILVNSETLEVE 540
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQ 76
+E +I E+ + V + L+ E C + GT++ LKPNIL ++S E L P
Sbjct: 94 WEGFSIAGERARRVERV----LDVRQGELCWVGGTVYMDMPLKPNILDDLSRESHTLAPP 149
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L GN+ Q+ TG ++A+ GT NG F+ D+
Sbjct: 150 PRRTYQDPAHPELTQIMLEDESGRLRLTGNLLRSTQLATGAIIAVLGTENANGDFETIDI 209
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 IIESCPDVYFTGNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEE 46
+++SCP ++F GNQ +F+T +E G S LK +D TD E
Sbjct: 468 VMQSCPHIFFAGNQPRFKTAVLE---GDSPLRLKGADTKMTDAAE 509
>gi|403214436|emb|CCK68937.1| hypothetical protein KNAG_0B05030 [Kazachstania naganishii CBS
8797]
Length = 477
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 109/194 (56%), Gaps = 29/194 (14%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPE-------ASKYSTFHPVTNPYIFEMEGKLL 209
SI VD+MPG DP++ +LPQQPLH LF E A + +TNP F + G +
Sbjct: 283 SIPVDVMPGANDPSDKSLPQQPLHTALFDESMRPYFSAENRQLLNLMTNPCSFSLNGWDV 342
Query: 210 MGTSGQPVSDIAKF-----SNLSNP-----------------LDILEYTLRCGHVAPTAP 247
+ SGQ ++DI K+ S+P LD++E T++ ++APTAP
Sbjct: 343 LAMSGQSINDICKYIIPYTKEGSDPNSEASSETMPTDTTEHRLDLMECTMKWQNIAPTAP 402
Query: 248 DTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAI 307
DTL CYP+ ++DP I++ P VY GNQ +F ++ I + +++I++P+F ++ + +
Sbjct: 403 DTLWCYPYKNDDPFILKRWPHVYCVGNQPEFGSRVITMNNGAKIKMIAIPEFSTTGKIVL 462
Query: 308 LNLSTLECHSLVVE 321
LNL +L+ + ++
Sbjct: 463 LNLKSLDTEVVRID 476
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELILEDELQRIPLHGN 103
E C +GT++ + KPNIL+E+ + VP ++ DE++LEDE R+ L G
Sbjct: 95 EPCWCVGTIYCEMKYKPNILEEVVNDTYGVPDLVKSYTDPQGEDEIMLEDESGRVILVGE 154
Query: 104 -IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
I +TG VV I G G F+V D+CY +
Sbjct: 155 YIRTTPFITGTVVGILGMEADPGTFQVLDICYPS 188
>gi|393245851|gb|EJD53361.1| hypothetical protein AURDEDRAFT_54409 [Auricularia delicata
TFB-10046 SS5]
Length = 454
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 90/155 (58%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
V LMPG DP + TLPQQP+ +F TNP F+++ ++ +GQ + D
Sbjct: 285 VHLMPGPSDPTSATLPQQPIPSAVFGPVHGAENLRCETNPCSFDIDECSILAIAGQNIDD 344
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
I ++S + L I TLR H+APTAPDTL CYPF +DP +++ P VY GNQ+ F+
Sbjct: 345 ICRYSANEDRLAIARDTLRWRHIAPTAPDTLWCYPFVADDPFVLKESPHVYAIGNQAAFQ 404
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
T ++ E +R++ VP F + T+ +LN TLE
Sbjct: 405 TDIVKDEAGNPIRVVLVPRFSKTGTLVLLNTKTLE 439
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 19 ETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ 78
+ K + SV V K+ L + + I+GTL+ +LKPN+L +I + +V
Sbjct: 48 KAKWASTDGAWSVHVPKV--LEVSKGQRSYIVGTLYMEMRLKPNVLDDIGHDHNIVSTTV 105
Query: 79 HTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
SD D L+LEDE RI L G+ + +N VTGV+VA G G+F+V+D+C+ P
Sbjct: 106 RDKIYSDEDALMLEDESGRIKLIGDALSKYNLVTGVIVAALGCENIQGEFEVADLCFTAP 165
Query: 138 VFNPRTTLSNNENKYVN 154
PR +L + + V+
Sbjct: 166 A--PRASLKSEDAMDVD 180
>gi|348674378|gb|EGZ14197.1| hypothetical protein PHYSODRAFT_254404 [Phytophthora sojae]
Length = 433
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 23/152 (15%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+++ VD+MPG DP+N TLPQQ HPCLFP +S + +F VTNPY ++ G G +GQ
Sbjct: 276 AAMCVDVMPGPSDPSNYTLPQQSFHPCLFPRSSHFKSFRCVTNPYEAQVGGVQFFGDAGQ 335
Query: 216 PVSDIAKF-----------------------SNLSNPLDILEYTLRCGHVAPTAPDTLAC 252
P+ + + + LD LE + H APTAPD LAC
Sbjct: 336 PLHSMLQCTLPKGEGDGDGDADLTTDEDKEKAEQERSLDYLERCVEWRHAAPTAPDILAC 395
Query: 253 YPFYDNDPMIIESCPDVYFTGNQSKFETKTIE 284
+P + DP I+E+CP VYF+GNQ +F T+ ++
Sbjct: 396 FPMANEDPFILETCPHVYFSGNQPRFSTRLVK 427
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 9 VYFTGNQSKFETKTIEIEK--GKSVSVL-KLSDLNETDTEECVIIGTLFKHQQLKPNILK 65
+Y + Q + ++++E+ G V VL K+ DL + D ECV+IGTL K + KP++
Sbjct: 35 IYVSRLQQLRDVVSVQVEERTGGRVPVLAKVIDL-KADGRECVLIGTLLKVLEAKPDLFD 93
Query: 66 EISEELKLVP-QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKG---TP 121
++ E + P + +D DEL+LEDE R+ L G ID+ VTGVV+ ++G
Sbjct: 94 ALTSETGVTPIEKIDKSLATDKDELLLEDESGRVQLVGGIDVARLVTGVVLGVRGRVPRD 153
Query: 122 VGNGKFKVSDVCYATPVFNPRTTL-SNNENKYV 153
G G+F V +V P F P+ L E++YV
Sbjct: 154 GGGGQFFVEEVFL--PSFPPQHPLPERQESEYV 184
>gi|344231946|gb|EGV63825.1| hypothetical protein CANTEDRAFT_130212 [Candida tenuis ATCC 10573]
Length = 478
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 13/170 (7%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTS 213
++ V +MPGE DP + LPQQ LH F Y +TNP E+EG +GTS
Sbjct: 303 ATCSVAIMPGESDPTDICLPQQSLHKSFFLTCKNYVGKNIKALTNPAWLEVEGVRYLGTS 362
Query: 214 GQPVSDIAKFSNLSNPL--------DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
GQ V+DI K+ L+N + ++ TL+ ++APTAPDTL CYPF + DP + +
Sbjct: 363 GQNVNDILKY--LTNEMRQDPQIVFKVMAGTLKWQNIAPTAPDTLFCYPFDNCDPFTLSN 420
Query: 266 -CPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
P VYF GNQSKF K I ++ + +V+L+S+P F + + +L+ TLE
Sbjct: 421 ETPHVYFVGNQSKFIDKCINLQNNISVKLLSIPKFSQTGEIVLLDTCTLE 470
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDELI-LEDELQ 96
LN T + C + GT+F K NIL ++ ++PQ ++ D E++ LEDE
Sbjct: 91 LNITSNKLCWVSGTVFCDLGNKLNILNDVKGGTDDVLPQIPDSYRSQDVGEVVMLEDESG 150
Query: 97 RIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
R L G+ VTGV+VA+ G + G F++ DV Y P P+ +L
Sbjct: 151 RAVLEGDEFFKENILVTGVIVAVLGIELQAGVFEIIDVIY--PSVAPQRSL 199
>gi|317038112|ref|XP_001401596.2| DNA polymerase delta subunit 2 [Aspergillus niger CBS 513.88]
Length = 533
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 47/207 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
S+ V LMPGE DPAN +LPQQ +H +FP+A Y F VTNP+ +
Sbjct: 313 SMPVTLMPGESDPANFSLPQQGIHRAMFPQARAYCAPPPAGEDKKEPGWFDSVTNPWEGD 372
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP--------------LDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V DI ++ N ++ + ++E LR PTAPDT
Sbjct: 373 VEGWRLWGSSGQNVDDILRYLNFADEEGNVADGAGDSEARMRVMEAMLRWRCGVPTAPDT 432
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK---------------DKN---- 290
L YPF +DP +I++CP ++F GNQ +F+T IE + D N
Sbjct: 433 LWSYPFQTHDPFVIQTCPHIFFAGNQPQFKTAVIEGDAPLKLNGADTEMTGTDDDNTSGP 492
Query: 291 -VRLISVPDFFSSRTVAILNLSTLECH 316
VRL+S+P F + + +++ TLE
Sbjct: 493 RVRLLSIPKFKETGELVLVDTETLEVE 519
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E + V + L+ E C + GT++ LKPNIL ++++E L P
Sbjct: 69 WEGFSIAGENARRVERV----LDVRQGELCWVAGTIYMDMPLKPNILDDLTKENYTLAPP 124
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 125 PRPTYQDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVIDT 184
>gi|367005664|ref|XP_003687564.1| hypothetical protein TPHA_0J03100 [Tetrapisispora phaffii CBS 4417]
gi|357525868|emb|CCE65130.1| hypothetical protein TPHA_0J03100 [Tetrapisispora phaffii CBS 4417]
Length = 468
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKLL 209
S+ + +MP DP++ LPQ+P + LF E K H TNP I+E G +
Sbjct: 284 SLPISIMPSTSDPSDKALPQRPFNKILFSELLKPYFADISRDLLHLATNPSIYEFNGIRI 343
Query: 210 MGTSGQPVSDI-------------AKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFY 256
+ TSG+ +SDI +K +++ + LD++E TL+ +VAPT PDTL YPF
Sbjct: 344 LATSGENISDICRYVIPGNSSENESKLNSVEHRLDLMECTLKWQNVAPTIPDTLWAYPFI 403
Query: 257 DNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
D DP I+ P VY GNQ +F T+ IE+ +K V+LI +P+F S ++ LNL TL
Sbjct: 404 DKDPFILNEMPHVYIAGNQPRFGTRDIEL-YNKKVKLICLPEFNKSSSLVTLNLKTL 459
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-S 86
GK+V V K L+ + C IGT++ + KPN+L+E+ + P ++ D +
Sbjct: 79 GKTV-VEKKKVLDIQANQPCWCIGTIYCEMKYKPNVLEEVVNDTYGAPDLLKSYTDPDGT 137
Query: 87 DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
DE++LEDE R+ L G+ + VTG VV + G G F++ D+CY + V +
Sbjct: 138 DEIMLEDESGRVLLVGDFLQSTPFVTGTVVGLLGMEAEAGTFQILDICYPSEVPQKEYQV 197
Query: 146 -SNNENKYV 153
+++E KY+
Sbjct: 198 PTSDEEKYI 206
>gi|255936291|ref|XP_002559172.1| Pc13g07420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583792|emb|CAP91811.1| Pc13g07420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 541
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 44/204 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-------------FHPVTNPYIFE 203
SI V LMPGE DPAN +LPQQ +H +FP+A YS F VTNP+ +
Sbjct: 324 SIPVTLMPGEKDPANFSLPQQGIHRTMFPQARAYSAPPVRGDEKPEAGWFDSVTNPWDGD 383
Query: 204 MEGKLLMGTSGQPVSDIAKFSNL----SNP---------LDILEYTLRCGHVAPTAPDTL 250
+EG L G SGQ V D+ ++ ++ S P + I+E LR PTAPDT+
Sbjct: 384 VEGWRLWGCSGQNVDDVLRYISIEGGNSTPDEEKDSDARIRIMEAMLRWRCGVPTAPDTI 443
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE------IEKD------------KNVR 292
YP+ +DP +IESCP ++F GNQ +F+T TIE ++ D VR
Sbjct: 444 WSYPYQSDDPYVIESCPHIFFVGNQPQFKTATIEGDVPLRLDGDTEMTGTADGSDAARVR 503
Query: 293 LISVPDFFSSRTVAILNLSTLECH 316
L+++P F + + +++ TLE
Sbjct: 504 LLALPKFSETGELILVDTETLEVE 527
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
++ TI EK + V + L+ E C + GT++ H +KPNIL+++S+E P
Sbjct: 74 WDGLTIAGEKVRRVDRV----LDVRQGELCWVAGTVYMHLPMKPNILEDLSKENFTSAPP 129
Query: 77 PQHTHFVSDSD----ELILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSD 131
P T + SD +++LEDE R+ L GN Q+ TG ++A GT NG F+V D
Sbjct: 130 PLRT-YTDPSDPSLTQIMLEDESGRLRLTGNFLQSTQLATGAIIAALGTENANGDFEVID 188
Query: 132 V 132
+
Sbjct: 189 I 189
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 2 IIESCPDVYFTGNQSKFETKTIE 24
+IESCP ++F GNQ +F+T TIE
Sbjct: 455 VIESCPHIFFVGNQPQFKTATIE 477
>gi|159125059|gb|EDP50176.1| DNA polymerase delta subunit 2, putative [Aspergillus fumigatus
A1163]
Length = 554
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 44/204 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LMPGE DPAN LPQQ +H +FP + Y F VTNP+ +
Sbjct: 337 SIPVTLMPGESDPANFALPQQGIHRAMFPRSRAYCAPPPPGDEAPEPGWFDSVTNPWEGD 396
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG L G+SGQ V D+ ++ + ++ + I+E LR APTAPDT+
Sbjct: 397 VEGWRLWGSSGQNVDDVLRYLDFADSDAPDAGDGDIEARMRIMEAMLRWRCGAPTAPDTI 456
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK------------------DKNVR 292
YPF NDP +++SCP ++F GNQ +F+T +E + VR
Sbjct: 457 WSYPFQTNDPFVMQSCPHIFFAGNQPRFKTAVLESDSPLRLNGADTKMTDTAENPGARVR 516
Query: 293 LISVPDFFSSRTVAILNLSTLECH 316
L+S+P F + + +++ TLE
Sbjct: 517 LLSIPKFKDTGELILVDSETLEVE 540
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQ 76
+E +I E+ + V + L+ E C + GT++ LKPNIL ++S E L P
Sbjct: 94 WEGFSIAGERARRVERV----LDVRQGELCWVAGTVYMDMPLKPNILDDLSRESHTLAPP 149
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L G++ Q+ TGV++A+ GT NG F+ D+
Sbjct: 150 PRRTYQDPAHPELTQIMLEDESGRLRLTGSLLTSTQLATGVIIAVLGTENANGDFETIDI 209
Query: 133 CYATPVFNPRTTLSNNENK 151
PR NEN+
Sbjct: 210 RVPDLPPQPR-RWERNENR 227
>gi|70994498|ref|XP_752028.1| DNA polymerase delta subunit 2 [Aspergillus fumigatus Af293]
gi|66849662|gb|EAL89990.1| DNA polymerase delta subunit 2, putative [Aspergillus fumigatus
Af293]
Length = 554
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 44/203 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LMPGE DPAN LPQQ +H +FP + Y F VTNP+ +
Sbjct: 337 SIPVTLMPGESDPANFALPQQGIHRAMFPRSRAYCAPPPPGDEAPEPGWFDSVTNPWEGD 396
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG L G+SGQ V D+ ++ + ++ + I+E LR APTAPDT+
Sbjct: 397 VEGWRLWGSSGQNVDDVLRYLDFADRDAPDAGDGDIEARMRIMEAMLRWRCGAPTAPDTI 456
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK------------------DKNVR 292
YPF NDP +++SCP ++F GNQ +F+T +E + VR
Sbjct: 457 WSYPFQTNDPFVMQSCPHIFFAGNQPRFKTAVLESDSPLRLNGADTKMTDTAENPGARVR 516
Query: 293 LISVPDFFSSRTVAILNLSTLEC 315
L+S+P F + + +++ TLE
Sbjct: 517 LLSIPKFKDTGELILVDSETLEV 539
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQ 76
+E +I E+ + V + L+ E C + GT++ LKPNIL ++S E L P
Sbjct: 94 WEGFSIAGERARRVERV----LDVRQGELCWVAGTVYMDMPLKPNILDDLSRESHTLAPP 149
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L G++ Q+ TGV++A+ GT NG F+ D+
Sbjct: 150 PRRTYQDPAHPELTQIMLEDESGRLRLTGSLLTSTQLATGVIIAVLGTENANGDFETIDI 209
Query: 133 CYATPVFNPRTTLSNNENK 151
PR NEN+
Sbjct: 210 RVPDLPPQPR-RWERNENR 227
>gi|350632136|gb|EHA20504.1| hypothetical protein ASPNIDRAFT_213157 [Aspergillus niger ATCC
1015]
Length = 609
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 47/204 (23%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
S+ V LMPGE DPAN +LPQQ +H +FP+A Y F VTNP+ +
Sbjct: 173 SMPVTLMPGESDPANFSLPQQGIHRAMFPQARAYCAPPPAGEDKKEPGWFDSVTNPWEGD 232
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP--------------LDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V DI ++ N ++ + ++E LR PTAPDT
Sbjct: 233 VEGWRLWGSSGQNVDDILRYLNFADEEGNVADGAGDSEARMRVMEAMLRWRCGVPTAPDT 292
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK---------------DKN---- 290
L YPF +DP +I++CP ++F GNQ +F+T IE + D N
Sbjct: 293 LWSYPFQTHDPFVIQTCPHIFFAGNQPQFKTAVIEGDAPLKLNGADTEMTGTDDDNTSGP 352
Query: 291 -VRLISVPDFFSSRTVAILNLSTL 313
VRL+S+P F + + ++ ST+
Sbjct: 353 RVRLLSIPKFKETGELTAISTSTV 376
>gi|239611589|gb|EEQ88576.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis ER-3]
Length = 563
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 43/201 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP--------------VTNPYI 201
SI V LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 299 SIPVTLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGAAEQAADPGWLDNVTNPWE 358
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSNPLDI----------------LEYTLRCGHVAPT 245
E+EG G SGQ V D+ ++ +L DI +E LR PT
Sbjct: 359 GEVEGWRFWGCSGQNVDDVLRYIDLEAEGDIIQGSESDKDGEARLQLMETMLRWRCAVPT 418
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI------------EKDKNVRL 293
APDTL CYP+ +DP +++CP V+F GNQ F T +E E+ VR+
Sbjct: 419 APDTLWCYPYQSHDPFTLQACPHVFFAGNQPSFRTGIVEGSAAALSSSDNGEEQSTRVRV 478
Query: 294 ISVPDFFSSRTVAILNLSTLE 314
I++P F + + +++ TLE
Sbjct: 479 IALPKFSETGEIVLVDAETLE 499
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE----LILEDE 94
L+ E C + GT++ LKPNIL +IS+E P +V S++ +LEDE
Sbjct: 48 LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPSRKTYVDSSNQSLTKTMLEDE 107
Query: 95 LQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 108 SGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 146
>gi|315045352|ref|XP_003172051.1| DNA polymerase subunit delta-2 [Arthroderma gypseum CBS 118893]
gi|311342437|gb|EFR01640.1| DNA polymerase subunit delta-2 [Arthroderma gypseum CBS 118893]
Length = 552
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 39/194 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST----------FHP-----VTNPYI 201
SI V LMPGE DPAN +LPQQ +H + P + Y + P VTNP+
Sbjct: 335 SIPVTLMPGETDPANFSLPQQEIHTAMLPRSKAYCAPVAPKLQAIPYEPGWLDNVTNPWE 394
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTL--RCGHVAPTA 246
++EG G+SGQ V DI ++ +L L ++E+ L RCG PTA
Sbjct: 395 GDIEGWRFWGSSGQNVDDILRYVSLEELEDDEDEDTQNGVRLKLMEHMLKWRCG--VPTA 452
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE-----IEKDK--NVRLISVPDF 299
PDT+ CYPF D DP +I+SCP V+F GNQ F++ IE E D VRLI++P F
Sbjct: 453 PDTIWCYPFQDKDPFVIQSCPHVFFAGNQPCFQSTVIEGGDWGTEDDSITKVRLIALPKF 512
Query: 300 FSSRTVAILNLSTL 313
+ + +L+ TL
Sbjct: 513 HETGEIVLLDTETL 526
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKL 73
++ +E I E + V + L+ E ++GT++ LKP+I+ +IS+E
Sbjct: 68 RAAWEGYNIAGEYARRVDRV----LDVRQGELSWVVGTVYMELPLKPSIMDDISKENWTA 123
Query: 74 VPQPQHTHFVSDSD---ELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKV 129
P PQ T+ +S + ++EDE R+ L G++ VTGVVVA+ GT +G+F+V
Sbjct: 124 APVPQKTYNDPNSKKPTQTMVEDESGRLVLTGSLLQSSFLVTGVVVAVLGTENADGEFEV 183
Query: 130 SDV 132
D+
Sbjct: 184 VDI 186
>gi|115397999|ref|XP_001214591.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192782|gb|EAU34482.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 541
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 46/206 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LMPG DPAN +LPQQ +H +FP+A Y F VTNP+ +
Sbjct: 322 SIPVTLMPGASDPANFSLPQQGIHRAMFPQARAYCAPPPTAGQAPEPGWFDSVTNPWEGD 381
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP--------------LDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V D+ ++ + ++ + I+E LR PTAPDT
Sbjct: 382 VEGWRLWGSSGQNVDDVLRYLDFADEYGTGESANGDAEARMKIMEAMLRWRCAVPTAPDT 441
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE--------------IEKDKN----- 290
+ YPF +DP +++SCP ++F GNQ +F+T IE + D++
Sbjct: 442 IWSYPFQTDDPFVMQSCPHIFFAGNQPQFKTAVIEGDSPLRLNGGDTEMTDADEDNSGPR 501
Query: 291 VRLISVPDFFSSRTVAILNLSTLECH 316
VRL+S+P F + + +++ TLE
Sbjct: 502 VRLLSIPSFSKTGELVLVDAETLEVE 527
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E+ + V + L+ E C + GT++ LKPNIL ++++E L P
Sbjct: 72 WEGFSIAGERARRVDRV----LDVRQGELCWVAGTIYMDMPLKPNILDDLTKENFTLAPP 127
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L G++ Q+ TG ++A+ GT NG F+ D+
Sbjct: 128 PRRTYLDPAHPELTQIMLEDESGRLRLTGSMLQSTQLATGAIIAVLGTENANGDFEAIDI 187
>gi|261204916|ref|XP_002627195.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis SLH14081]
gi|239592254|gb|EEQ74835.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis SLH14081]
gi|327348397|gb|EGE77254.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 566
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 43/201 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP--------------VTNPYI 201
SI V LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 341 SIPVTLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGAAEQAADPGWLDNVTNPWE 400
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSNPLDI----------------LEYTLRCGHVAPT 245
E+EG G SGQ V D+ ++ +L DI +E LR PT
Sbjct: 401 GEVEGWRFWGCSGQNVDDVLRYIDLEAEGDIIQGSESDKDGEARLQLMETMLRWRCAVPT 460
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI------------EKDKNVRL 293
APDTL CYP+ +DP +++CP V+F GNQ F T +E E+ VR+
Sbjct: 461 APDTLWCYPYQSHDPFTLQACPHVFFAGNQPSFRTGIVEGSAAALSSSDNGEEQSTRVRV 520
Query: 294 ISVPDFFSSRTVAILNLSTLE 314
I++P F + + +++ TLE
Sbjct: 521 IALPKFSETGEIVLVDAETLE 541
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE----LILEDE 94
L+ E C + GT++ LKPNIL +IS+E P +V S++ +LEDE
Sbjct: 90 LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPSRKTYVDSSNQSLTKTMLEDE 149
Query: 95 LQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 150 SGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|224003461|ref|XP_002291402.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973178|gb|EED91509.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 558
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 26/194 (13%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHPVTNPYIFEMEGKL-LMGTS 213
S + VD +PG DP N PQ+P+H CL P A Y F TNPY + G + ++G+
Sbjct: 363 SGVPVDYIPGWHDPTNANWPQRPIHSCLLPNACSYVDLFSRSTNPYEGVVGGNVRVLGSD 422
Query: 214 GQPVSDIAKF-----SN-------LSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPM 261
G V+D+ ++ SN ++ +D L+ T +CGH+APT PD+L +P ++DP
Sbjct: 423 GLNVADLRRYLVEGESNDGEEKVVAASSIDTLQTTFQCGHIAPTGPDSLPTFPSSESDPF 482
Query: 262 IIESCPDVYFTGNQSKFETKTIE------------IEKDKNVRLISVPDFFSSRTVAILN 309
++++ P+V+F GN KFET+ + ++ + RLI VP F + ++N
Sbjct: 483 VLQTRPNVFFAGNCEKFETRLVGADGNEVEGGAKYVDGENGTRLICVPSFALTGEAVLIN 542
Query: 310 LSTLECHSLVVEDL 323
L TL+C + D+
Sbjct: 543 LKTLKCDVVSFNDV 556
>gi|388580940|gb|EIM21251.1| hypothetical protein WALSEDRAFT_57598 [Wallemia sebi CBS 633.66]
Length = 508
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 12/170 (7%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPV-----TNPYIFEMEGKLLMGT 212
+EVD++PG DPA T LPQQP +F A +++F TNP F ++ + +
Sbjct: 296 VEVDILPGSVDPAGTLLPQQPFPKAMFKGA--FNSFEQGAINCHTNPTWFSVDDTRFLVS 353
Query: 213 SGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
GQ + D K+ + L + +L+ H+APTAPDTL CYPF D DP I+ CP V+
Sbjct: 354 GGQTLDDSFKYIRGQDRLGLAVDSLKWRHIAPTAPDTLWCYPFTDRDPFILSECPHVFVN 413
Query: 273 GNQSKFETKTIEIE-----KDKNVRLISVPDFFSSRTVAILNLSTLECHS 317
GNQ F ++ ++ + + R++++P+F S T+A+++L TL C +
Sbjct: 414 GNQDSFASELVDGSLSIGPEGQQTRVVNLPEFTESSTIALVDLDTLSCET 463
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-SDSDELILEDELQRIPLHGNIDIH 107
++GT++ +LKPN+L +++ V P+ T + S++DEL LEDE RI L G ++
Sbjct: 96 VVGTVYMDMKLKPNVLDDLARN-HWVAAPEPTEKIYSNNDELCLEDESGRIKLVGETILN 154
Query: 108 NQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
+Q VTGV++ + G G+F V D+CY
Sbjct: 155 SQLVTGVIIGVLGIEKDPGEFTVIDICY 182
>gi|238882848|gb|EEQ46486.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 474
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 10/174 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEMEGKLLMGTS 213
S+ V +MPG+ DPA LPQQPLH LF S + +TNP + + ++GTS
Sbjct: 301 SLPVAVMPGKNDPAEICLPQQPLHRSLFKNNSSLLDGNRLTRLTNPQWIDAQTVKILGTS 360
Query: 214 GQPVSDIAKF-----SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCP 267
GQ V DI K+ + ++I+E ++ + PTAPDTL CYP+ + DP I + P
Sbjct: 361 GQNVDDIQKYIVPKKDHQFTSIEIMENNIKWQNFVPTAPDTLYCYPYENYDPFIFSDDLP 420
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
VYF GNQ +F++K +E NVRLIS+P F S +L+L TLE + +E
Sbjct: 421 HVYFVGNQQQFDSKLLE-HDGVNVRLISIPKFKESGQFVLLDLDTLETEVVTIE 473
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGNI 104
C +IGT+F + K +IL ++ + V + +V++ ++ ++LEDE R L+ +
Sbjct: 93 CWVIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVNEDEQPIVMLEDESGRAILNNDN 152
Query: 105 DIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
+ VTG +VA+ G + G F++ D+ Y P P+ L ENK
Sbjct: 153 FLAKNLLVTGCIVAVLGIEIQAGIFEIMDIAY--PDCAPQKPLPLGENK 199
>gi|392577101|gb|EIW70231.1| hypothetical protein TREMEDRAFT_68559 [Tremella mesenterica DSM
1558]
Length = 489
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
+ L+PG DPA TLPQQPL + +K + TNP E+ + + GQ V D
Sbjct: 321 ITLIPGPSDPAGATLPQQPLPKVMLGGKAKMTGLESCTNPSWIEVGDRSFFLSGGQTVDD 380
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
I K+ S L + + TL HVAPTAPDTL YPF D DP +I PDVY G Q +FE
Sbjct: 381 IYKYIPSSGRLGMAKRTLEWRHVAPTAPDTLWIYPFPDADPFVIHHRPDVYIIGCQPEFE 440
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
T+ + D R+I VP F + V +L L TLEC ++ E
Sbjct: 441 --TVIVGDDSPTRIILVPGFVKTGQVVLLCLETLECKTVEFE 480
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
LN ++ C I+GT++ LKPNIL++++ + + P F S D + LEDE R+
Sbjct: 79 LNLQRSQLCYIVGTVYMEMPLKPNILEDMARDHWIAPPAPRPKFYSAQDAVHLEDESGRV 138
Query: 99 PLHG-------NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT--PVFNPRTTLSNN 148
L G + + VTGV++A G +G F+V D+C+A V+ P SN
Sbjct: 139 KLIGEKIKKERDREGGGLVTGVIMAALGMETSSGDFEVIDLCFAGMPDVYKPAAGPSNG 197
>gi|241956019|ref|XP_002420730.1| DNA polymerase III (delta) small subunit, putative [Candida
dubliniensis CD36]
gi|223644072|emb|CAX41815.1| DNA polymerase III (delta) small subunit, putative [Candida
dubliniensis CD36]
Length = 474
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 10/174 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEMEGKLLMGTS 213
S+ V +MPG+ DPA LPQQPLH LF S + +TNP +++ ++GTS
Sbjct: 301 SLPVAVMPGKNDPAEICLPQQPLHRSLFKNNSSLLNGDRLNRLTNPQWIDVQTVKILGTS 360
Query: 214 GQPVSDIAKFSNLSN-----PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCP 267
GQ V DI K+ N ++I+E ++ + PTAPDTL CYP+ + DP I + P
Sbjct: 361 GQNVDDIKKYIAPQNDHQFTSIEIMENNIKWQNFIPTAPDTLYCYPYENYDPFIFCDDLP 420
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
VYF GNQ +++K ++ + N+RLISVP F S +L+L TLE + +E
Sbjct: 421 HVYFVGNQQSYDSKLLQYD-GVNIRLISVPKFKESGQFVLLDLDTLETEVVTIE 473
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGN- 103
C +IGT+F + K +IL ++ + V + +V +++ ++LEDE R L+ +
Sbjct: 93 CWVIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVDKNEQPIVMLEDESGRAILNNDN 152
Query: 104 -IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
+ + VTG +VA+ G V G F++ D+ Y P P+ L+ ENK
Sbjct: 153 FLTKNLLVTGCIVAVLGIEVQAGIFEIMDIAY--PDCAPQKPLTLGENK 199
>gi|68066984|ref|XP_675463.1| DNA polymerase delta small subunit [Plasmodium berghei strain ANKA]
gi|56494663|emb|CAH94472.1| DNA polymerase delta small subunit, putative [Plasmodium berghei]
Length = 477
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 19/220 (8%)
Query: 98 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSS 157
+ LHG+ I + +V+ G +GN V+D+ + SS
Sbjct: 262 LGLHGDKFISQNLIRLVIV--GNSLGNINSDVNDINVIDTFLSSLC------------SS 307
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+ VDLMPGE DP++ LPQQP F ++ KY +F VTNPY+F ++ + SG+PV
Sbjct: 308 VYVDLMPGEKDPSDAILPQQPFPNMFFKKSKKYDSFQCVTNPYMFSIDNVNICCMSGEPV 367
Query: 218 SDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES---CPDVYFTGN 274
++I +S ++ LD L+ + ++PT+PDTL CYP+ DNDP I+ P ++ GN
Sbjct: 368 NNIISYSKVT-KLDALKMIAKSRILSPTSPDTLGCYPYIDNDPFCIKDDNIYPHIFVNGN 426
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
SK E + +E EK K L+ +PDF + +N+ +E
Sbjct: 427 CSKLEMQYLENEK-KLPFLVCLPDFSITPKALAINIKNME 465
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 19 ETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ 78
++K E E+ K + LK +NE +C IGT+FK L+P+ILKE EL +
Sbjct: 108 KSKGGENEQVKVLQYLKDIKINE----KCYCIGTIFKKMDLRPSILKEYISELDYLDTV- 162
Query: 79 HTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
++ D L LEDE R+ L GNI+ N VTG+ + IKG + NG V ++ Y+
Sbjct: 163 -INYSQYQDILFLEDETARLKLEGNINSDNYVTGLTIIIKGVGMSNGSLYVEELIYS 218
>gi|225562395|gb|EEH10674.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 565
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 42/202 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP--------------VTNPYI 201
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 341 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGAAEPAAEPGWLDNVTNPWE 400
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLS----------------NPLDILEYTLRCGHVAPT 245
++EG G SGQ V D+ ++ +L L ++E LR PT
Sbjct: 401 GDVEGWRFWGCSGQNVDDVLRYIDLEVEGDTLQGSESDKDGEARLRLMEAMLRWRCAVPT 460
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI-----------EKDKNVRLI 294
APDTL CYP+ +DP ++SCP V+F GNQ F T +E E+ VR+I
Sbjct: 461 APDTLWCYPYQTHDPFTLQSCPHVFFAGNQPSFRTGIVEASTTLSSEDNGEEQGTRVRVI 520
Query: 295 SVPDFFSSRTVAILNLSTLECH 316
++P F + + +++ TLE
Sbjct: 521 ALPKFSQTGEIVLVDAETLEVE 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
+ +E I E K V + L+ E C + GT++ LKPNIL +IS+E
Sbjct: 71 AAWEGFNIAGEYAKRVDRV----LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAA 126
Query: 76 QPQHTHFVSDSDELI----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVS 130
P +V S++ + LEDE R+ L G + + VTG +VA+ GT NG F+V
Sbjct: 127 PPVRRTYVDPSNQALTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVI 186
Query: 131 DV 132
D+
Sbjct: 187 DI 188
>gi|240281243|gb|EER44746.1| DNA polymerase delta small subunit [Ajellomyces capsulatus H143]
Length = 565
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 99/200 (49%), Gaps = 42/200 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP--------------VTNPYI 201
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 341 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGVAEPAAEPGWLDNVTNPWE 400
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLS----------------NPLDILEYTLRCGHVAPT 245
++EG G SGQ V D+ ++ +L L ++E LR PT
Sbjct: 401 GDVEGWRFWGCSGQNVDDVLRYIDLEVEGDTLQGSESDKDGEARLRLMEAMLRWRCAVPT 460
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI-----------EKDKNVRLI 294
APDTL CYP+ +DP ++SCP V+F GNQ F T +E E+ VR+I
Sbjct: 461 APDTLWCYPYQTHDPFTLQSCPHVFFAGNQPSFRTGIVEASTTLSSADNGEEQGTRVRVI 520
Query: 295 SVPDFFSSRTVAILNLSTLE 314
++P F + + +++ TLE
Sbjct: 521 ALPKFSQTGEIVLVDAETLE 540
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
+ +E I E K V + L+ E C + GT++ LKPNIL +IS+E
Sbjct: 71 AAWEGFNIAGEYAKRVDRV----LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAA 126
Query: 76 QPQHTHFVSDSDELI----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVS 130
P +V S++ + LEDE R+ L G + + VTG +VA+ GT NG F+V
Sbjct: 127 PPVRRTYVDPSNQALTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVI 186
Query: 131 DV 132
D+
Sbjct: 187 DI 188
>gi|242223029|ref|XP_002477193.1| predicted protein [Postia placenta Mad-698-R]
gi|220723408|gb|EED77603.1| predicted protein [Postia placenta Mad-698-R]
Length = 503
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNP-YIFEMEG---KLLMGT 212
++ + ++PG DPA T LPQQP +F A+ +++F TNP Y+ + + + +
Sbjct: 328 TMPIHVLPGASDPAGTLLPQQPFPRAMFGSAAAFASFTCETNPTYLRAVSATPFRTFLVS 387
Query: 213 SGQPVSDIAKF--SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
SGQPV D+ K+ S LS L I E +LR H+APTAPDTL C+P++ +DP +I PDVY
Sbjct: 388 SGQPVDDMLKYLPSPLSTRLSIAEASLRWRHIAPTAPDTLWCHPYFGSDPFVISETPDVY 447
Query: 271 FTGNQSKFETKTIEIEKD------KNVRLISVPDFFSSRTVAILNLSTLECHSL 318
G Q +F T+ E K R++ VP F + T+ +LN+ TL ++
Sbjct: 448 IVGCQPRFGTRVEGEEDMEGEGGVKRCRVVLVPGFRETGTLVLLNMRTLAVKTV 501
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHG-NIDI 106
+IGT++ +KPN+L++++ + L P P+ T + S D+ +LEDE RI L G I
Sbjct: 84 VIGTVYMDMPMKPNVLEDLARDHSLPAPAPRMT-YCSQDDQPMLEDESGRIALVGERIRS 142
Query: 107 HNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNEN 150
VTGVV+ I G G+F+V D+C A P + L+ E+
Sbjct: 143 ARLVTGVVLGILGIETSGGEFEVVDICTAGMAPQPYSDLNWGES 186
>gi|325092264|gb|EGC45574.1| DNA polymerase delta small subunit [Ajellomyces capsulatus H88]
Length = 565
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 42/202 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP--------------VTNPYI 201
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 341 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGVAEPAAEPGWLDNVTNPWE 400
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLS----------------NPLDILEYTLRCGHVAPT 245
++EG G SGQ V D+ ++ +L L ++E LR PT
Sbjct: 401 GDVEGWRFWGCSGQNVDDVLRYIDLEVEGDTLQGSESDKDGEARLRLMEAMLRWRCAVPT 460
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI-----------EKDKNVRLI 294
APDTL CYP+ +DP ++SCP V+F GNQ F T +E E+ VR+I
Sbjct: 461 APDTLWCYPYQTHDPFTLQSCPHVFFAGNQPSFRTGIVEASTTLSSADNSEEQGTRVRVI 520
Query: 295 SVPDFFSSRTVAILNLSTLECH 316
++P F + + +++ TLE
Sbjct: 521 ALPKFSQTGEIVLVDAETLEVE 542
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
+ +E +I E K V + L+ E C + GT++ LKPNIL +IS+E
Sbjct: 71 AAWEGFSIAGEYAKRVDRV----LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAA 126
Query: 76 QPQHTHFVSDSDELI----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVS 130
P +V S++ + LEDE R+ L G + + VTG +VA+ GT NG F+V
Sbjct: 127 PPVRRTYVDPSNQALTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVI 186
Query: 131 DV 132
D+
Sbjct: 187 DI 188
>gi|68467741|ref|XP_722029.1| hypothetical protein CaO19.11442 [Candida albicans SC5314]
gi|68468060|ref|XP_721869.1| hypothetical protein CaO19.3960 [Candida albicans SC5314]
gi|46443811|gb|EAL03090.1| hypothetical protein CaO19.3960 [Candida albicans SC5314]
gi|46443976|gb|EAL03254.1| hypothetical protein CaO19.11442 [Candida albicans SC5314]
Length = 474
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEMEGKLLMGTS 213
S+ V +MPG+ DPA LPQQPLH LF S + +TNP + + ++GTS
Sbjct: 301 SLPVAVMPGKNDPAEICLPQQPLHRSLFKNNSSLLDGNRLTRLTNPQWIDAQTVKILGTS 360
Query: 214 GQPVSDIAKF-----SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCP 267
GQ V DI K+ + ++I+E ++ + PTAPDTL CYP+ + DP I + P
Sbjct: 361 GQNVDDIQKYIVPKKDHQFTSIEIMENNIKWQNFVPTAPDTLYCYPYENYDPFIFSDDLP 420
Query: 268 DVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
VYF GNQ +F++K E NVRLIS+P F S +L+L TLE + +E
Sbjct: 421 HVYFVGNQQQFDSKLFE-HDGVNVRLISIPKFKESGQFVLLDLDTLETEVVTIE 473
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGNI 104
C +IGT+F + K +IL ++ + V + +V++ ++ ++LEDE R L+ +
Sbjct: 93 CWVIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVNEDEQPIVMLEDESGRAILNNDN 152
Query: 105 DIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENK 151
+ VTG +VA+ G + G F++ D+ Y P P+ L ENK
Sbjct: 153 FLAKNLLVTGCIVAVLGIEIQAGIFEIMDIAY--PDCAPQKPLPLGENK 199
>gi|259481579|tpe|CBF75230.1| TPA: DNA polymerase III (delta) subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 538
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 45/202 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI + LMPGE DPAN LPQQP+H +FP + Y F VTNP+ +
Sbjct: 320 SIPITLMPGESDPANFALPQQPIHRAMFPRSRAYCSAPPIGEDKVEPGWFDSVTNPWEGD 379
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG G+SGQ V D+ ++ + ++ + ++E LR PTAPDTL
Sbjct: 380 VEGWRFWGSSGQNVDDVLRYLDFADEDGNVDMNGDTEARIRVMEAMLRWRCGVPTAPDTL 439
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE----IEKDK---------------NV 291
YPF +DP ++ESCP ++F GNQ +F+T IE + D V
Sbjct: 440 WSYPFQTHDPFVMESCPHLFFAGNQPQFKTAVIEGDLPLRPDGEDTEMGGTAQNAAVPTV 499
Query: 292 RLISVPDFFSSRTVAILNLSTL 313
RLIS+P F + + +++ TL
Sbjct: 500 RLISLPKFRETGELVLVDTETL 521
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E + V + L+ E C + GT++ LKPNIL +++++ P
Sbjct: 72 WEGFSIAGEHARRVERV----LDVRQGELCWVAGTIYMEMPLKPNILDDLAKDNFTSAPP 127
Query: 77 PQHTH---FVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ + E++LEDE R+ L G+ + TGV++A+ GT NG F+ D+
Sbjct: 128 PRRTYQDPAHPELTEIMLEDESGRLRLTGSKLQSVQLATGVIIAVLGTENANGDFEAIDI 187
Query: 133 CYATPVFNPR 142
PR
Sbjct: 188 KVPDLARQPR 197
>gi|367014817|ref|XP_003681908.1| hypothetical protein TDEL_0E04540 [Torulaspora delbrueckii]
gi|359749569|emb|CCE92697.1| hypothetical protein TDEL_0E04540 [Torulaspora delbrueckii]
Length = 461
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 19/183 (10%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKLL 209
SI V LMPG DP N +LPQ+P H LF ++ K + VTNPY F +EG +
Sbjct: 279 SIPVALMPGASDPTNKSLPQEPFHKALFQKSLKDHFEEINRNILDLVTNPYRFHIEGLEI 338
Query: 210 MGTSGQPVSDIAKF-----------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDN 258
+ +GQ ++D+ K+ L + LD++E T++ ++ PTAPDTL YP+ D
Sbjct: 339 LALAGQSINDLCKYVIPAQGSSQDQDTLEHRLDLMECTMKWQNIIPTAPDTLWSYPYSDA 398
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
P +++ P VY GNQ + ++ +E+ K VRLISVP + S V + + +T E +
Sbjct: 399 SPFVLDEWPHVYVVGNQPSYGSRDLEMH-GKKVRLISVPKYSLSGNVVLFDPATFETEII 457
Query: 319 VVE 321
+E
Sbjct: 458 NIE 460
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-S 86
GK V + K L+ E +IG+++ + KPNIL+E+ ++ P ++ + S
Sbjct: 72 GKHVEMRK-KVLDIQGNEPVWVIGSVYCEMKYKPNILEEVINDVYGAPDLTKSYTDPEGS 130
Query: 87 DELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY--ATPVFNPRT 143
DE++LEDE R+ L G NI VTG V+ + G G F+V D+CY A P + R
Sbjct: 131 DEIMLEDESGRVLLVGENIRATPFVTGAVIGVLGMEADAGTFQVLDICYPAALPQKSLRL 190
Query: 144 TLSNNENK----YVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFP--EASKYSTFHPVT 197
++ N K +V+ I PG L Q+ L L P EAS+
Sbjct: 191 SVPNGSKKKKIAFVSGLGINT-TSPGNL--LKLQLLQEYLMGRLGPVDEASQIGKLIICG 247
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKFSN-LSNPLDILEYTLRCGHVAPT 245
+ F + G+SG+ V+ + F + LSN L + L G PT
Sbjct: 248 DSLSFTFD----EGSSGELVNCLETFGDFLSNVLQSIPVALMPGASDPT 292
>gi|83282443|ref|XP_729773.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23488516|gb|EAA21338.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 485
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 19/220 (8%)
Query: 98 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSS 157
+ LHG+ I + +V+ G +GN V+D+ + SS
Sbjct: 270 LGLHGDKFISQNLIRLVIV--GNSLGNINSDVNDINVIDTFLSSLC------------SS 315
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+ VDLMPGE DP++ LPQQP F ++ KY +F VTNPY+F ++ + SG+PV
Sbjct: 316 VYVDLMPGEKDPSDAILPQQPFPNMFFKKSKKYDSFQCVTNPYMFSIDNVNICCMSGEPV 375
Query: 218 SDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES---CPDVYFTGN 274
++I +S + LD L+ + ++PT+PDTL CYP+ DNDP I+ P ++ GN
Sbjct: 376 NNIISYSK-TTKLDALKMIAKSRILSPTSPDTLGCYPYIDNDPFCIKDDNIYPHIFVNGN 434
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
SK E + +E EK K L+ +PDF + +N+ +E
Sbjct: 435 CSKLEMEYLENEK-KLPFLVCLPDFSVTPKALAINIKNME 473
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 19 ETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ 78
+ K E +GK + LK +NE +C IGT+FK L+P+ILKE E++ +
Sbjct: 115 QGKKGERGQGKVLQYLKDIKINE----KCYCIGTIFKKMDLRPSILKEYISEIEYLDDTV 170
Query: 79 HTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
++ D D L LEDE R+ L GNI+ + VTG+ + IKG + NG V +V Y+
Sbjct: 171 -INYSQDQDILFLEDETARLKLEGNINSDHYVTGLTIIIKGVGMSNGSLYVEEVIYS 226
>gi|145539045|ref|XP_001455217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423016|emb|CAK87820.1| unnamed protein product [Paramecium tetraurelia]
Length = 459
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEA-SKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
I V +MPG+ +P + LPQ L F E+ S +TNP F + L +GTSGQ
Sbjct: 297 IPVAIMPGQNEPVSQILPQTSLQKAHFGESFENNSQVSFLTNPAEFSLGNILFVGTSGQN 356
Query: 217 VSDIAKFSNLSNP--LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
+ DI K+ + + +D++E L GH+APT DTL + NDP II P+VYF GN
Sbjct: 357 IQDIKKYQTIKDQPDIDLIEMNLFYGHLAPTLQDTLIQQQQFTNDPFIINQLPNVYFVGN 416
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
F TK + N+R+IS+P F S T+ +LNLSTL+C S ++
Sbjct: 417 MKSFGTKRL----SNNLRIISIPSFSESGTICLLNLSTLDCFSFEIQ 459
>gi|295672612|ref|XP_002796852.1| DNA polymerase subunit delta-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282224|gb|EEH37790.1| DNA polymerase subunit delta-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 576
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 105/214 (49%), Gaps = 45/214 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP---------------VTNPY 200
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 358 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGTTGEPTAEPGWLDNVTNPW 417
Query: 201 IFEMEGKLLMGTSGQPVSDIAKFSNLSNPLD----------------ILEYTLRCGHVAP 244
++EG G SGQ V D+ ++ +L D ++E LR P
Sbjct: 418 EGDVEGWRFWGCSGQNVDDMLRYIDLEAEGDGLGGNESDRDGEARLRLMEAMLRWRCAVP 477
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETK-----------TIEIEKDKNVRL 293
TAPDTL CYP+ +DP I++SCP V+F GNQ F T I E+ VR+
Sbjct: 478 TAPDTLWCYPYQTHDPFILQSCPHVFFAGNQPSFRTAIVESSAAVSSSGIGDEQGMRVRI 537
Query: 294 ISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
I++P F + + ++++ TLE VV T ER
Sbjct: 538 ITLPKFSETGEIVLVDVDTLEVE--VVRFGTFER 569
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL----ILEDE 94
L+ E C + GT++ LKPNIL +IS+E P ++ S++ +LEDE
Sbjct: 101 LDVRQGELCWVAGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQASAKTMLEDE 160
Query: 95 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 132
R+ L G + VTG +VA+ GT NG F+V D+
Sbjct: 161 SGRLQLTGTLLQSALLVTGAIVAVLGTENVNGDFEVIDI 199
>gi|294941698|ref|XP_002783195.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239895610|gb|EER14991.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 498
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Query: 147 NNENKYVNH--SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM 204
N +K++ S+ V ++PG DPAN LPQQPLH LFPE+ K TNP F++
Sbjct: 299 NGVDKFLARVAKSVPVTILPGAQDPANFALPQQPLHSALFPESRKIMDLTAETNPARFQV 358
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII- 263
+ +G++G V ++ ++S +N LD LE T R +APTAPDT+ACYPF DP++I
Sbjct: 359 GDCVFLGSTGACVKEVTQYSTTTNVLDALELTARGRVIAPTAPDTIACYPFPSFDPLVIT 418
Query: 264 --ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
E V F+ N K E + ++ D V L+SV F S + ++N+
Sbjct: 419 DEEPVGHVMFSANHDKAEFRVVDF-GDAKVTLLSVSAFTSDPVLLLVNI 466
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 42 TDTEECV---IIGTLFKHQQLKPNILKEISEELKLVP-QPQHTH--------FVSDSDEL 89
TD E V I G + K +L+P++L EI + + P T + SD D++
Sbjct: 115 TDRERGVTVAIYGCVVKEVKLRPSVLAEIQKTAGISGIHPAMTSEGYSMTDSYTSDEDKI 174
Query: 90 ILEDELQRIPL----HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
LED RI L +D++ G+V+A KGT G G F+V ++ Y +P+
Sbjct: 175 YLEDSSSRIRLVVREGATVDLNRLCQGLVLAFKGTR-GRGCFEVDEMVYPLS-LSPKAIP 232
Query: 146 SNNENKYVNHSS 157
S+ + +YV S
Sbjct: 233 SSRDAEYVGFVS 244
>gi|154279190|ref|XP_001540408.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412351|gb|EDN07738.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 565
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 98/202 (48%), Gaps = 42/202 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------------FHPVTNPYI 201
SI + LMPGE DPAN +LPQQ +H +FP + Y + VTNP+
Sbjct: 341 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAALPGAAEPAAEPGWLDNVTNPWE 400
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLS----------------NPLDILEYTLRCGHVAPT 245
++EG G SGQ V D+ ++ +L L ++E LR PT
Sbjct: 401 GDVEGWRFWGCSGQNVDDVLRYIDLEVEGDTLQGSESDKDGEARLRLMEAMLRWRCAVPT 460
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI-----------EKDKNVRLI 294
APDTL CYP+ +DP ++SCP V+F GNQ F T +E E+ VR+I
Sbjct: 461 APDTLWCYPYQTHDPFTLQSCPHVFFAGNQPSFRTGIVEASTILSSEDNGEEQGTRVRVI 520
Query: 295 SVPDFFSSRTVAILNLSTLECH 316
++P F + + +++ TLE
Sbjct: 521 ALPKFSQTGEIVLVDAETLEVE 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
+ +E I E K V + L+ E C + GT++ LKPNIL +IS+E
Sbjct: 71 AAWEGFNIAGEYAKRVDRV----LDVRQGELCWVAGTIYMDLPLKPNILDDISKEHWTAA 126
Query: 76 QPQHTHFVSDSDELI----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVS 130
P +V S++ + LEDE R+ L G + + VTG +VA+ GT NG F+V
Sbjct: 127 PPVRRTYVDPSNQALTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVI 186
Query: 131 DVCYATPVFNPR-----TTLSNNENKYVNHSSIEV 160
D+ P P+ + + E+ HSS+E
Sbjct: 187 DI--KVPDLPPQPERWERSSAPQESAKRKHSSLEA 219
>gi|209876912|ref|XP_002139898.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209555504|gb|EEA05549.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 493
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 8/167 (4%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S I VDLM G DP ++PQ +HP LFP + Y TF P TNPY F + ++G SG
Sbjct: 328 SVINVDLMSGPQDPVPISMPQPQMHPSLFPNSKDYDTFRPTTNPYSFSINDVRIIGVSGH 387
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII----ESCPDVYF 271
+ D+ +S+ P+D L+Y + +APTAPDTL CYP +D+D + + + P + F
Sbjct: 388 SIDDVMAYSSYKEPIDALKYCVESRSLAPTAPDTLPCYPLFDDDVLSLDYPDDQFPHLIF 447
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
GNQSKF++ I++P F T+ ++++++L+ ++
Sbjct: 448 AGNQSKFQS----FRFPNGPLCITIPKFSEIATLVLVDINSLKTKTI 490
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPL---H 101
EC+IIG ++K +L+P +L E +++ + + + T+F S +D+L +ED RI L +
Sbjct: 116 ECIIIGLIYKEMKLRPTVLDEYLQDIDVETNENKITNFCSSTDKLYIEDTSSRICLSSPN 175
Query: 102 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
+D V+G ++A+KG +G F V+D C
Sbjct: 176 NILDSSKYVSGTMIAVKGVQTDSGIFIVNDYC 207
>gi|67526799|ref|XP_661461.1| hypothetical protein AN3857.2 [Aspergillus nidulans FGSC A4]
gi|40739932|gb|EAA59122.1| hypothetical protein AN3857.2 [Aspergillus nidulans FGSC A4]
Length = 606
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 45/188 (23%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI + LMPGE DPAN LPQQP+H +FP + Y F VTNP+ +
Sbjct: 177 SIPITLMPGESDPANFALPQQPIHRAMFPRSRAYCSAPPIGEDKVEPGWFDSVTNPWEGD 236
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG G+SGQ V D+ ++ + ++ + ++E LR PTAPDTL
Sbjct: 237 VEGWRFWGSSGQNVDDVLRYLDFADEDGNVDMNGDTEARIRVMEAMLRWRCGVPTAPDTL 296
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE----IEKDK---------------NV 291
YPF +DP ++ESCP ++F GNQ +F+T IE + D V
Sbjct: 297 WSYPFQTHDPFVMESCPHLFFAGNQPQFKTAVIEGDLPLRPDGEDTEMGGTAQNAAVPTV 356
Query: 292 RLISVPDF 299
RLIS+P F
Sbjct: 357 RLISLPKF 364
>gi|390594258|gb|EIN03671.1| hypothetical protein PUNSTDRAFT_139385 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 522
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 39/212 (18%)
Query: 139 FNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTN 198
F+P+ + E+ S++ + ++PGE DP+ T LPQQ + AS++S+FHP TN
Sbjct: 292 FSPKPINTLAEHLLDIASAVPIHILPGEIDPSGTMLPQQKFPRAMLGPASRFSSFHPETN 351
Query: 199 PYIFEME-----------------------------GKLLMGTSGQPVSDIAKFSNLSNP 229
P + + L+ SGQP+ D+ K+ L P
Sbjct: 352 PTYLRLSVGSPDATASQDLPGTSKAAAARRRRLRQIDRTLLVHSGQPLDDMFKY--LPTP 409
Query: 230 ----LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI 285
L + E TLR H+APTAPDTL C+P++ DP +I PDVY GNQ +F TK +
Sbjct: 410 PFSRLAVAERTLRWRHMAPTAPDTLWCHPYFSADPFVIAQTPDVYVIGNQPEFRTKVVAD 469
Query: 286 E----KDKNVRLISVPDFFSSRTVAILNLSTL 313
E VR++ VP F + + ++NL TL
Sbjct: 470 EGPGKSGARVRIVLVPRFSETGLLVLVNLRTL 501
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 21 KTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 80
K E G V V ++ D+ ++ C I+GT++ LKPN+L++I + P
Sbjct: 67 KRWEGIAGSPVLVPRVLDV--VKSQLCYIVGTVYMDMPLKPNVLEDIGRHHSIPVPPPRE 124
Query: 81 HFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
F S++D ++LEDE R+ L G + VTGV++ G G F+V D+CYA
Sbjct: 125 KFYSETDCVMLEDESGRVRLVGKAVTEAGLVTGVILGALGIETPGGDFEVVDLCYA 180
>gi|255723331|ref|XP_002546599.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130730|gb|EER30293.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 477
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 11/175 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHPVTNPYIFEMEGKLLMGTS 213
S+ V +MPG+ DPA LPQQ LH LF TNP E+ G ++GTS
Sbjct: 303 SLPVAVMPGDHDPAEVCLPQQALHKMLFRTNKALLGSDRLIRTTNPQWMEVNGVRMLGTS 362
Query: 214 GQPVSDIAKFSNLSN------PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESC 266
GQ V D+ ++ +N + ++E ++ + APT PDTL CYP+ + DP I E
Sbjct: 363 GQNVDDVMRYIPDTNGSISPTSIQVMESNIKWQNFAPTCPDTLYCYPYDNYDPFIFAEEL 422
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
P VYF GNQ K++ K + E K V LISVP+F S + +L+L+TLE + +E
Sbjct: 423 PHVYFVGNQKKYDFKKLAYE-GKTVSLISVPNFKESGEIVLLDLNTLETEVVTIE 476
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 17 KFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ 76
K+ T EI+ V K+ D+ T + C ++GT++ + K NIL ++ + V
Sbjct: 69 KWGNGTQEIDGQTIVRTNKILDI--TSGKLCWVVGTVYCDAKYKLNILDDVEKGTDDVMP 126
Query: 77 PQHTHFVSDSDE---LILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSD 131
P ++ D DE ++LEDE R LH + + VTG +VA+ G + G F++ D
Sbjct: 127 PVPVTYM-DGDESPIMMLEDESGRAILHNDEYLKKNLLVTGCIVAVLGMELQAGIFEIMD 185
Query: 132 VCY 134
V Y
Sbjct: 186 VVY 188
>gi|294900658|ref|XP_002777052.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239884506|gb|EER08868.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 498
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 98/169 (57%), Gaps = 6/169 (3%)
Query: 147 NNENKYVNH--SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM 204
N +K++ S+ V ++PG DPAN LPQQPLH LFPE+ K TNP F++
Sbjct: 299 NGVDKFLARVARSVPVTILPGAQDPANFALPQQPLHSALFPESRKIMDLTAETNPARFQV 358
Query: 205 EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII- 263
+ +G++G V ++ ++S +N LD LE T R +APTAPDT+ACYPF DP++I
Sbjct: 359 GDCVFLGSTGACVKEVTQYSTTTNVLDALELTARGRVIAPTAPDTIACYPFPSFDPLVIT 418
Query: 264 --ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
E V F+ N K E + +++ K V L+SV F S + ++N+
Sbjct: 419 DEEPVGHVMFSANHDKAEFRVVDLGNAK-VTLLSVSAFTSDPILFLVNI 466
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 42 TDTEECV---IIGTLFKHQQLKPNILKEISEELKLVP-QPQHTH--------FVSDSDEL 89
TD E V I G + K +L+P++L EI + + P T + SD D++
Sbjct: 115 TDRERGVTVAIYGCVVKEVKLRPSVLAEIQKTAGISGIHPAMTSEGYSMTDSYASDEDKI 174
Query: 90 ILEDELQRIPL----HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
LED RI L +D++ G+V+A KGT G G F+V ++ P+ P+
Sbjct: 175 YLEDSSSRIRLVVREGATVDLNRLCQGLVLAFKGTR-GRGCFEVDEMVCPLPLI-PKGIP 232
Query: 146 SNNENKYVNHSS 157
S+ + +YV S
Sbjct: 233 SSRDAEYVGFVS 244
>gi|389749277|gb|EIM90454.1| hypothetical protein STEHIDRAFT_154278 [Stereum hirsutum FP-91666
SS1]
Length = 519
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 30/255 (11%)
Query: 87 DELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS 146
D+ + ++ R+ + GN + + V + A + +P K K Y F+P T++
Sbjct: 248 DDQVSASQISRLVILGN-SLSDAVNAQIAA-EDSPKDKDK-KGKRYGYDNASFSPHPTIN 304
Query: 147 NNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNP-YIFEME 205
+ + + ++ + L+PG DP+ T LPQQPL +F A+ +S+F TNP YI
Sbjct: 305 LSGHLHDLARTLPIHLLPGASDPSGTILPQQPLPRMMFGPAAAFSSFTCETNPTYIRLSP 364
Query: 206 GK-----------------------LLMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCG 240
GK ++ TSGQP+ D+ K+ S + L + E TLR
Sbjct: 365 GKPQEQENIPPSAPSPAKKSDSWARTILATSGQPLDDMFKYVPSPPATRLGLAESTLRWR 424
Query: 241 HVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFF 300
H+APTAPDTL C+PF+ DP I+ PDVY G Q KF TK ++ + ++ R++ VP+F
Sbjct: 425 HMAPTAPDTLWCHPFFTKDPFILSQTPDVYAIGCQPKFSTKLVK-DDERRCRIVLVPNFA 483
Query: 301 SSRTVAILNLSTLEC 315
+ + ++ + L+
Sbjct: 484 ETGVLVLVGMRRLDA 498
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-NID 105
C ++GT++ LK N+L+++ + + P S D + LEDE RI L G I+
Sbjct: 89 CFVVGTVYMEMPLKANVLEDVGRDHSIPAPPPRDKIYSADDHVTLEDESGRIQLVGEKIE 148
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
VTGV++ G NG F+V DVCYA
Sbjct: 149 RERLVTGVILGALGYENANGDFQVVDVCYA 178
>gi|401882114|gb|EJT46387.1| DNA polymerase delta, small subunit [Trichosporon asahii var.
asahii CBS 2479]
Length = 490
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ ++L+PG DP LPQQP+ +F K TNP E+ + + + GQ
Sbjct: 313 SSLPMNLVPGPSDPGGAVLPQQPMPKVMF-GGKKMEGLECNTNPTWLEIGDRSFLCSGGQ 371
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+ + L + + TL H+APTAPDTL YPF DNDP II P+VY GNQ
Sbjct: 372 TIDDVFKYLPGKSRLPMAKRTLEWRHIAPTAPDTLWIYPFPDNDPFIIRERPNVYVVGNQ 431
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+FET + ++DK R++ +P F ++ TVA++ L TLE ++ E
Sbjct: 432 PEFETALVG-DEDKT-RIVMLPSFAATGTVALVCLETLEVKTVAFE 475
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 35 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 94
++ DLN + C I+GT++ LKPN+L++++ + P F S D + LEDE
Sbjct: 89 RILDLNRG--QPCYIVGTVYMDMPLKPNVLEDMARSNWIAPPAPRPKFYSSQDAVHLEDE 146
Query: 95 LQRIPLHGNIDIHNQ-------VTGVVVAIKGTPVGNGKFKVSDVCYAT--PVFNPRTTL 145
R+ L G++ + VTGV++ + G +G F+V ++C+A V++P ++
Sbjct: 147 SGRVRLVGDVIRKERDREGGGFVTGVIMGVLGFENSSGDFEVMELCFAGMPDVYHPSSSG 206
Query: 146 SNNENKYVNHSSIEVD 161
+ N K S++VD
Sbjct: 207 TAN-GKGKARESMDVD 221
>gi|242808483|ref|XP_002485173.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715798|gb|EED15220.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 493
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 126/271 (46%), Gaps = 53/271 (19%)
Query: 94 ELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV-SDVCYATPVFN--PRTTLSNNEN 150
+ R+ + GN + + A+ G G K KV Y +N P T L N +
Sbjct: 212 RISRLIIAGNSLGNLETATAAAAMNGD--GTAKKKVPKKYGYDASSYNASPITQLDNFLS 269
Query: 151 KYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-------------FHPVT 197
+ + S+ V LMPGE DPAN +LPQQ +H + P A YS+ F VT
Sbjct: 270 ELL--PSLPVTLMPGENDPANFSLPQQGIHRAMLPRAKAYSSDGLPGDTSVEPGWFDNVT 327
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKFSNLSN--------------PLDILEYTLRCGHVA 243
NP+ ++G G SGQ V D+ ++ + ++ + I+E LR
Sbjct: 328 NPWEGYVDGWRFWGCSGQNVDDVLRYLDFADEDGNATNSDGDGETSVQIMEAMLRWRCAV 387
Query: 244 PTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK---------------- 287
PTAPDTL CYPF +DP I+++CP ++F GNQS F+T + E
Sbjct: 388 PTAPDTLWCYPFQTHDPFILQACPHLFFIGNQSHFKTVVVVSEPAFRLDGPDTEMSNSAD 447
Query: 288 ---DKNVRLISVPDFFSSRTVAILNLSTLEC 315
+VRL+S+P F + + +++ TLE
Sbjct: 448 EPLATHVRLVSIPKFHETGELILVDSETLEV 478
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS----DSDELILEDELQRIPLHG 102
C + GT++ LKPNIL +++++ P T ++ D +++LEDE R+ + G
Sbjct: 45 CWVTGTVYMDLPLKPNILDDVAKDNYAAAPPPRTTYIDPLNPDKTQVMLEDESGRLRMTG 104
Query: 103 N-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLSNNE 149
+ + VTGV++A+ GT NG F+V D+ PV PR L++ +
Sbjct: 105 TMLRTTHLVTGVIIAVLGTENSNGDFEVIDIKVPDFPVQPPRWELASTD 153
>gi|317146095|ref|XP_003189770.1| DNA polymerase delta subunit 2 [Aspergillus oryzae RIB40]
Length = 540
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 45/205 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LM G DPAN +LPQQ +H +FP + Y F VTNP+ +
Sbjct: 322 SIPVTLMAGASDPANFSLPQQGIHRAMFPRSRAYCSGPTSAGETPEPGWFDSVTNPWEGD 381
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG L G+SGQ V D+ ++ + +N + I+E LR PTAPDT+
Sbjct: 382 IEGWRLWGSSGQNVDDVLRYLDFANSSGTVGADGDAEARVKIMEAMLRWRCGVPTAPDTI 441
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIE-------------------KDKNV 291
YPF +DP ++E+CP ++F GNQ +F+T IE + V
Sbjct: 442 WSYPFQTHDPFVMEACPHIFFAGNQPQFKTAVIEGDAPLKLNGTDTEMTGTNDNISGPRV 501
Query: 292 RLISVPDFFSSRTVAILNLSTLECH 316
RL+S+P F + + +++ TLE
Sbjct: 502 RLLSIPTFKETGELVLVDAETLEVE 526
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQ 76
+E +I E + V + L+ E C + GT++ LKPNIL ++++E L P
Sbjct: 72 WEGFSIAGEHARRVERV----LDVRQGELCWVAGTIYMDLPLKPNILDDLTKENFTLAPP 127
Query: 77 PQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
P+ T+ EL +LEDE R+ L GN+ Q+ TG +VA+ GT NG F+V DV
Sbjct: 128 PRPTYLDPAHPELTQIMLEDESGRLRLTGNMLRSIQLATGAIVAVLGTENSNGDFEVIDV 187
>gi|406700838|gb|EKD04000.1| DNA polymerase delta, small subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 617
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SS+ ++L+PG DP LPQQP+ +F K TNP E+ + + + GQ
Sbjct: 440 SSLPMNLVPGPSDPCGAVLPQQPMPKVMF-GGKKMEGLECNTNPTWLEIGDRSFLCSGGQ 498
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQ 275
+ D+ K+ + L + + TL H+APTAPDTL YPF DNDP II P+VY GNQ
Sbjct: 499 TIDDVFKYLPGKSRLPMAKRTLEWRHIAPTAPDTLWIYPFPDNDPFIIRERPNVYVVGNQ 558
Query: 276 SKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
+FET + ++DK R++ +P F ++ TVA++ L TLE ++ E
Sbjct: 559 PEFETALVG-DEDKT-RIVMLPSFAATGTVALVCLETLEVKTVAFE 602
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 35 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 94
++ DLN + C I+GT++ LKPN+L++++ + P F S D + LEDE
Sbjct: 216 RILDLNRG--QPCYIVGTVYMDMPLKPNVLEDMARSNWIAPPAPRPKFYSSQDAVHLEDE 273
Query: 95 LQRIPLHGNIDIHNQ-------VTGVVVAIKGTPVGNGKFKVSDVCYAT--PVFNPRTTL 145
R+ L G++ + VTGV++ + G +G F+V ++C+A V++P ++L
Sbjct: 274 SGRVRLVGDVIRKERDREGGGFVTGVIMGVLGFENSSGDFEVMELCFAGMPDVYHP-SSL 332
Query: 146 SNNENKYVNHSSIEVD 161
K S++VD
Sbjct: 333 GTANGKGKARESMDVD 348
>gi|242808477|ref|XP_002485172.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715797|gb|EED15219.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 545
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 129/277 (46%), Gaps = 57/277 (20%)
Query: 92 EDE----LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV-SDVCYATPVFN--PRTT 144
EDE + R+ + GN + + A+ G G K KV Y +N P T
Sbjct: 258 EDESPARISRLIIAGNSLGNLETATAAAAMNGD--GTAKKKVPKKYGYDASSYNASPITQ 315
Query: 145 LSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST------------ 192
L N ++ + S+ V LMPGE DPAN +LPQQ +H + P A YS+
Sbjct: 316 LDNFLSELL--PSLPVTLMPGENDPANFSLPQQGIHRAMLPRAKAYSSDGLPGDTSVEPG 373
Query: 193 -FHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSN--------------PLDILEYTL 237
F VTNP+ ++G G SGQ V D+ ++ + ++ + I+E L
Sbjct: 374 WFDNVTNPWEGYVDGWRFWGCSGQNVDDVLRYLDFADEDGNATNSDGDGETSVQIMEAML 433
Query: 238 RCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK---------- 287
R PTAPDTL CYPF +DP I+++CP ++F GNQS F+T + E
Sbjct: 434 RWRCAVPTAPDTLWCYPFQTHDPFILQACPHLFFIGNQSHFKTVVVVSEPAFRLDGPDTE 493
Query: 288 ---------DKNVRLISVPDFFSSRTVAILNLSTLEC 315
+VRL+S+P F + + +++ TLE
Sbjct: 494 MSNSADEPLATHVRLVSIPKFHETGELILVDSETLEV 530
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 14 NQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL 73
+ ++ TI EK + V + L+ C + GT++ LKPNIL +++++
Sbjct: 68 GREAWDGFTIAGEKARKVDRV----LDVRQGALCWVTGTVYMDLPLKPNILDDVAKDNYA 123
Query: 74 VPQPQHTHFVS----DSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFK 128
P T ++ D +++LEDE R+ + G + + VTGV++A+ GT NG F+
Sbjct: 124 AAPPPRTTYIDPLNPDKTQVMLEDESGRLRMTGTMLRTTHLVTGVIIAVLGTENSNGDFE 183
Query: 129 VSDVCYAT-PVFNPRTTLSNNE 149
V D+ PV PR L++ +
Sbjct: 184 VIDIKVPDFPVQPPRWELASTD 205
>gi|226292616|gb|EEH48036.1| DNA polymerase delta small subunit [Paracoccidioides brasiliensis
Pb18]
Length = 526
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 105/214 (49%), Gaps = 45/214 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP---------------VTNPY 200
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 308 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGTTGEPTAEPGWLDNVTNPW 367
Query: 201 IFEMEGKLLMGTSGQPVSDIAKFSNLSNPLD----------------ILEYTLRCGHVAP 244
++EG G SGQ V D+ ++ +L D ++E LR P
Sbjct: 368 EGDVEGWRFWGCSGQNVDDMLRYIDLETEGDGLGGNESDKDGEARLRLMEAMLRWRCAVP 427
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI-----------EKDKNVRL 293
TAPDTL CYP+ +DP ++SCP V+F GNQ F T +E E+ VR+
Sbjct: 428 TAPDTLWCYPYQTHDPFTLQSCPHVFFAGNQPSFRTAIVESSAAVSSSGTGDEQGMRVRI 487
Query: 294 ISVPDFFSSRTVAILNLSTLECHSLVVEDLTEER 327
I++P F + + ++++ TLE VV T ER
Sbjct: 488 ITLPKFSETGEIVLVDVDTLEVE--VVRFGTFER 519
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL----ILEDE 94
L+ E C + GT++ LKPNIL +IS+E P ++ S++ +LEDE
Sbjct: 91 LDVRQGELCWVAGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQASAKTMLEDE 150
Query: 95 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY----ATPVFNPRTTLSNNE 149
R+ L G + VTG +VA+ GT NG F+V D+ A P R++ + E
Sbjct: 151 SGRLQLTGTLLQSALLVTGAIVAVLGTENVNGDFEVIDIKVPDLPAQPERWERSSAAPQE 210
Query: 150 NKYVNHSSIE 159
+ H S+E
Sbjct: 211 SAKRKHDSLE 220
>gi|238491652|ref|XP_002377063.1| DNA polymerase delta subunit 2, putative [Aspergillus flavus
NRRL3357]
gi|220697476|gb|EED53817.1| DNA polymerase delta subunit 2, putative [Aspergillus flavus
NRRL3357]
Length = 442
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 45/205 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LM G DPAN +LPQQ +H +FP + Y F VTNP+ +
Sbjct: 224 SIPVTLMAGASDPANFSLPQQGIHRAMFPRSRAYCSGPTSAGETPEPGWFDSVTNPWEGD 283
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNP-------------LDILEYTLRCGHVAPTAPDTL 250
+EG L G+SGQ V D+ ++ + +N + I+E LR PTAPDT+
Sbjct: 284 IEGWRLWGSSGQNVDDVLRYLDFANSSGTVGADGDAEARVKIMEAMLRWRCGVPTAPDTI 343
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIE-------------------KDKNV 291
YPF +DP ++E+CP ++F GNQ +F+T IE + V
Sbjct: 344 WSYPFQTHDPFVMEACPHIFFAGNQPQFKTAVIEGDAPLKLNGTDTEMTGTNDNISGPRV 403
Query: 292 RLISVPDFFSSRTVAILNLSTLECH 316
RL+S+P F + + +++ TLE
Sbjct: 404 RLLSIPTFKETGELVLVDAETLEVE 428
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 59 LKPNILKEISEELK-------LVPQPQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHN 108
LKPNIL ++++E P P+ T+ EL +LEDE R+ L GN+
Sbjct: 5 LKPNILDDLTKEASRQCLLPYTSPPPRPTYLDPAHPELTQIMLEDESGRLRLTGNMLRSI 64
Query: 109 QV-TGVVVAIKGTPVGNGKFKVSDV 132
Q+ TG +VA+ GT NG F+V DV
Sbjct: 65 QLATGAIVAVLGTENSNGDFEVIDV 89
>gi|409046235|gb|EKM55715.1| hypothetical protein PHACADRAFT_173871 [Phanerochaete carnosa
HHB-10118-sp]
Length = 508
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 101/195 (51%), Gaps = 33/195 (16%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNP-YI----FE-------- 203
S+ + L+PG DP+ T +PQQ L +F A+ Y++F TNP YI FE
Sbjct: 290 SVPIHLLPGAADPSGTIIPQQSLPRAMFGAAASYASFSCETNPTYIHVGAFEDTSSSNTK 349
Query: 204 ----------------MEGKLLMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCGHVAPT 245
+ ++ SGQP+ D+ K+ S + L I E TLR H+APT
Sbjct: 350 SNGRASTSKPKSGRSSTPSRTILAHSGQPLDDMFKYLPSPPATRLSIAEATLRWRHIAPT 409
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEI--EKDKNVRLISVPDFFSSR 303
APDTL C+P++ DP I+ PD+Y GNQ +F TK + E + R++ VP F S
Sbjct: 410 APDTLWCHPYFTTDPFILTETPDLYIVGNQPEFGTKMVRATEESEGRCRIVLVPQFKHSG 469
Query: 304 TVAILNLSTLECHSL 318
TV ++NL TL ++
Sbjct: 470 TVVLVNLRTLSVRTV 484
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-NID 105
C ++GT++ LKPN+L +++ + + P + S+ D ++LEDE RI L G +
Sbjct: 88 CYVVGTVYMDMPLKPNVLDDVARDHSIPAPPPQQKYCSEKDSVMLEDESGRIRLVGERLK 147
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEV--DLM 163
VTGV++ G NG F+V D C+A P+ ++N+ + + I V L
Sbjct: 148 SARVVTGVIMGALGLETANGDFEVVDFCFAE--MPPQHKEADNDRESNSDEWIAVVSGLD 205
Query: 164 PGEFDPANTTL 174
G DP + L
Sbjct: 206 VGALDPPDAQL 216
>gi|121706972|ref|XP_001271691.1| DNA polymerase delta subunit 2, putative [Aspergillus clavatus NRRL
1]
gi|119399839|gb|EAW10265.1| DNA polymerase delta subunit 2, putative [Aspergillus clavatus NRRL
1]
Length = 540
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 45/204 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------------STFHPVTNPYIFE 203
SI V LMPG+ DPAN LPQQ +H +FP + Y F VTNP+ +
Sbjct: 322 SIPVTLMPGDSDPANFALPQQGIHRAMFPRSRAYCAAPPSKDETPEPGWFDSVTNPWEGD 381
Query: 204 MEGKLLMGTSGQPVSDIAKF--------------SNLSNPLDILEYTLRCGHVAPTAPDT 249
+EG L G+SGQ V D+ ++ ++ + I+E LR PTAPDT
Sbjct: 382 VEGWRLWGSSGQNVDDVLRYLDFADGDADQDAGDGDIEARMRIMEAMLRWRCGVPTAPDT 441
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE------------------IEKDKNV 291
+ YPF +DP +I+SCP ++F GNQ +F T +E + V
Sbjct: 442 IWSYPFQTSDPFVIQSCPHIFFAGNQPRFRTALLEGDLPLKLNGTDTEMSDAPGDAGPRV 501
Query: 292 RLISVPDFFSSRTVAILNLSTLEC 315
RL+S+P F + + +++ +LE
Sbjct: 502 RLLSIPKFKETGELILIDTESLEV 525
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV-PQPQHTHFVSDSDEL---ILEDE 94
L+ E C + GT++ LKPNIL ++S+E ++ P P+ T+ EL +LEDE
Sbjct: 86 LDVRQGELCWVAGTVYMDMPLKPNILDDLSKENHIIAPPPRRTYIDPAHPELTQIMLEDE 145
Query: 95 LQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 132
R+ L GN+ Q+ TG ++A+ GT NG F+ D+
Sbjct: 146 SGRLRLTGNLLRSTQLATGAIIAVLGTENANGDFETIDI 184
>gi|448121642|ref|XP_004204261.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
gi|358349800|emb|CCE73079.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
Length = 493
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 21/185 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS---TFHPVTNPYIFEME--GKLLMG 211
S+ + +MPG DPA LPQQ +H +F ++ +Y + +TNP E E G +G
Sbjct: 306 SMPISVMPGLNDPAEICLPQQKMHRSIFHKSKQYVNSPSLRILTNPAWIEFENSGLRFLG 365
Query: 212 TSGQPVSDIAKF--SNLSNPLDI----LEYTLRCGHVAPTAPDTLACYPFYDNDPM-IIE 264
TSGQ +SDI K+ +++ DI +E T++ ++ PTAPDTL CYPF ++DP ++
Sbjct: 366 TSGQNISDIRKYLTKDIATSADIDMRIMENTVKWQNIVPTAPDTLYCYPFDNSDPFTLVT 425
Query: 265 SCPDVYFTGNQSKFETKTIEI---------EKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
P VYF NQS F KTI + +D V LI++P F ++ + +L+L +L C
Sbjct: 426 ETPHVYFAANQSSFSCKTITLPHTEQSNKNTQDSTVTLITIPCFSTTGQIVVLDLQSLTC 485
Query: 316 HSLVV 320
++ +
Sbjct: 486 EAISI 490
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDE 94
L+ + + C ++GT++ + K NIL+++ + ++P+ ++ +SDE+ ++EDE
Sbjct: 94 LDISSGQLCWVVGTIYTEMKNKLNILQDVEMGVDDVLPEIPESYVDQESDEMPIVMIEDE 153
Query: 95 LQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
R LH + + VTG +VAI G + G F++ DV Y P +P+ L
Sbjct: 154 SGRAVLHNDDFLKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PAMSPQKPL 204
>gi|170094006|ref|XP_001878224.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646678|gb|EDR10923.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 544
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 33/190 (17%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEG------------- 206
+ ++PGE DP+ +PQQPL +F EASK +TF TNP ++
Sbjct: 327 IHILPGESDPSGVIMPQQPLPRAMFGEASKLTTFSCETNPTYLKIATSEESPNSSSAAPN 386
Query: 207 -----KLLMGTSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTAPDTLACYPFYD 257
+ L+ SGQP++DI K+ L +P L ILE T+R H+APTAPDTL C+P++
Sbjct: 387 RPIVERTLLINSGQPLNDIFKY--LPSPPHTRLSILESTIRWRHMAPTAPDTLWCHPYFA 444
Query: 258 NDPMIIESCPDVYFTGNQSKFETKTI-----EIEKDKN----VRLISVPDFFSSRTVAIL 308
DP +I PD+Y G Q F TK + E E+ + R++ +P F + T+ ++
Sbjct: 445 EDPFLISETPDIYIVGGQKAFGTKLLLDNSKEAEEKGSSRPRCRIVMIPSFARTGTLVLV 504
Query: 309 NLSTLECHSL 318
NL +L+ +
Sbjct: 505 NLRSLDVRRV 514
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 84
+ KG V + ++ L T + C ++GT++ LKPN++++I+ + + P P F S
Sbjct: 85 LSKGNPVLIPRV--LEVTKSHLCYVVGTVYMDMPLKPNVMEDIARDNSIPPPPPPLTFYS 142
Query: 85 DSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
D ++LEDE RI L G+ + VTGV++ G NG F+V D+C A PR
Sbjct: 143 PDDNVMLEDESGRIRLVGDRLKDARLVTGVIIGALGMETPNGDFEVVDICCAE--MAPRP 200
Query: 144 TLSNNEN 150
+ S N
Sbjct: 201 SASEGTN 207
>gi|448124019|ref|XP_004204814.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
gi|358249447|emb|CCE72513.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
Length = 489
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS---TFHPVTNPYIFEME--GKLLMG 211
S+ + +MPG DPA LPQQ +H +F + +Y + +TNP E E G +G
Sbjct: 302 SMPISVMPGLNDPAEICLPQQKMHRSIFQRSKQYVNSPSLRILTNPAWMEFENSGLRFLG 361
Query: 212 TSGQPVSDIAKF--SNLSNPLDI----LEYTLRCGHVAPTAPDTLACYPFYDNDPM-IIE 264
TSGQ +SDI K+ +++ DI +E T++ ++ PTAPDTL CYPF ++DP ++
Sbjct: 362 TSGQNISDIRKYLTKDIATSPDIDMCIMENTVKWQNIVPTAPDTLYCYPFDNSDPFTLVT 421
Query: 265 SCPDVYFTGNQSKFETKTIEI---------EKDKNVRLISVPDFFSSRTVAILNLSTLEC 315
P VYF NQS F KTI + D +V LI++P F ++ + +L+L +L C
Sbjct: 422 ETPHVYFAANQSSFSCKTITLPHTEQSNKNTHDASVTLITIPSFSATGQIVLLDLQSLTC 481
Query: 316 HSLVV 320
++ +
Sbjct: 482 EAISI 486
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDE 94
L+ + + C ++GT++ + K NIL+++ + ++P+ ++ +S+E+ ++EDE
Sbjct: 90 LDISSGQLCWVVGTIYTEMKNKLNILQDVEMGVDDVLPKIPESYVDQESEEMPIVMIEDE 149
Query: 95 LQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTL 145
R LH + + VTG +VAI G + G F++ DV Y P +P+ L
Sbjct: 150 SGRAVLHNDDFLKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PAMSPQKPL 200
>gi|149238157|ref|XP_001524955.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451552|gb|EDK45808.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 479
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---FHPVTNPYIFEMEGKLLMGTSGQP 216
+ +MPG+ DP+ +PQQPLH +F + + +TNP E++G ++GTSGQ
Sbjct: 308 ISIMPGDHDPSEICIPQQPLHRSIFKSSLSLVSDDRLERLTNPVWLEIDGVKILGTSGQN 367
Query: 217 VSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCPDVYFT 272
V+D+ ++ S + + I++ ++ + PTAPDTL CYP+ D DP I ++ P VYF
Sbjct: 368 VNDVKRYMTRSTAQDSMKIMKSSMSWQNFVPTAPDTLYCYPYDDYDPFIFTDTLPHVYFA 427
Query: 273 GNQSKFETKTIEI-EKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
GNQ+K+E T E V L+S+P+F ++ + +L T++ + V+
Sbjct: 428 GNQTKYEADTYTCPESGSKVSLVSIPEFKTTGEFVVFDLGTMQSEVVKVK 477
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 31/195 (15%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEE----LKLVPQPQHTHFVSDSDE---LILEDELQRIP 99
C ++GT+F + K NIL ++ + L LVP ++ ++DE ++LEDE R
Sbjct: 96 CWVVGTVFCDAKYKLNILNDVEKGTDDVLPLVP----VSYLDENDEQPVVMLEDESGRAV 151
Query: 100 LHGNIDIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS---NNENKYV 153
LH N + N+ VTG +VA+ G V G F++ DV Y P P+ LS + K
Sbjct: 152 LH-NEEFLNRNLLVTGCIVAVLGIEVQAGIFEIMDVAY--PECAPQKPLSPPQSRAKKIA 208
Query: 154 NHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTS 213
S + + G++D L + L L E S +N + ++ G S
Sbjct: 209 IVSGLNIG-AEGDYD-----LKIELLKQFLLGETGSSSDSEYSSN-----IARLIIAGDS 257
Query: 214 GQPVSDIAKFSNLSN 228
+P+ D+A +L N
Sbjct: 258 IEPIRDVAAEEDLRN 272
>gi|212537697|ref|XP_002149004.1| DNA polymerase delta subunit 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210068746|gb|EEA22837.1| DNA polymerase delta subunit 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 544
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 45/205 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-------------FHPVTNPYIFE 203
SI V +MPGE DPAN +LPQQ +H + P A Y + F VTNP+
Sbjct: 326 SIPVTIMPGETDPANFSLPQQGIHRAMLPRAKTYCSDGLPGDTSVEPGWFDNVTNPWEGY 385
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSN-------------PLDILEYTLRCGHVAPTAPDTL 250
++G L G SGQ V D+ ++ + ++ + ++E LR PTAPDTL
Sbjct: 386 VDGWRLWGCSGQNVDDVLRYLDFADENGNTDGDSARETSVQVMEAMLRWRCAVPTAPDTL 445
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK-------------------DKNV 291
CYPF +DP I+++CP ++F GNQ F+T +E E V
Sbjct: 446 WCYPFQTHDPFILQACPHLFFIGNQPHFKTVVVESEPPFRLDGPDTEMSNSADEPLATRV 505
Query: 292 RLISVPDFFSSRTVAILNLSTLECH 316
RL+S+P F + + +++ TLE
Sbjct: 506 RLVSIPKFHETGELILVDSETLEVE 530
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 14 NQSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LK 72
+ ++ TI EK + V + L+ C + GT++ + LKPNIL +++++
Sbjct: 68 GREAWDGFTIAGEKARKVDRV----LDVRQGALCWVTGTVYMNLPLKPNILDDVAKDNYA 123
Query: 73 LVPQPQHTHF---VSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFK 128
P P+ T+ D +++LEDE R+ + G+ + + VTGV++A+ GT NG F+
Sbjct: 124 AAPPPRKTYLDPSNPDQTQVMLEDESGRLRMTGSMLRTTHLVTGVIIAVLGTENSNGDFE 183
Query: 129 VSDVCYATPVFNPR 142
V D+ P F P+
Sbjct: 184 VIDI--KVPDFPPQ 195
>gi|301605980|ref|XP_002932622.1| PREDICTED: DNA polymerase delta subunit 2-like [Xenopus (Silurana)
tropicalis]
Length = 335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V+V KL +L E+C ++GTLFK +L+P+IL+EISEE L+PQP ++SDSD
Sbjct: 74 GDDVAVRKLCELQ--GEEKCCVVGTLFKSMELQPSILREISEEHNLLPQPARHKYISDSD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLS 146
ELILEDELQRI L G D+ VTG V+A+ G+ GKF V D C + P +P LS
Sbjct: 132 ELILEDELQRIKLEGATDVQQLVTGAVLAVLGSEGDAGKFMVEDFCLTSLPAQSPLPRLS 191
Query: 147 NNENKYV 153
E+++V
Sbjct: 192 --EDRFV 196
>gi|124504825|ref|XP_001351155.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
gi|3649756|emb|CAB11105.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
Length = 498
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SSI +DLMPG+ DP+++ LPQQP F +A +++F VTNPY+F ++ + SG+
Sbjct: 326 SSIHIDLMPGDKDPSDSNLPQQPFPNIFFKKARNFNSFQCVTNPYLFSIDNINICCMSGE 385
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII---ESCPDVYFT 272
PV +I +S +N ++ L+ + ++PT+PDTL CYPF NDP + + P ++
Sbjct: 386 PVHNITSYSK-NNKMNALKLIAQSRILSPTSPDTLGCYPFTKNDPFCLNDDNTYPHIFIN 444
Query: 273 GNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
GN SK E + ++ + L+ +P+F S ++NL LE
Sbjct: 445 GNCSKLEVQYMQDHNKQLPLLVCLPNFHISPKAFLINLKNLE 486
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E+C IGT+FK +L+P+IL E E+ ++ ++ D D L LEDE R+ L GNI
Sbjct: 150 EKCYCIGTIFKKMELRPSILNEYLSEISILNNT--INYTHDEDILFLEDETARLKLEGNI 207
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN---NENKYV 153
+ +TG+ V +KG + NG V ++ Y+ + P+ + N N++K++
Sbjct: 208 NSDFYITGLTVIVKGIGMSNGSLYVEEIIYS---YIPKLDIPNCISNDDKFI 256
>gi|444322766|ref|XP_004182024.1| hypothetical protein TBLA_0H02190 [Tetrapisispora blattae CBS 6284]
gi|387515070|emb|CCH62505.1| hypothetical protein TBLA_0H02190 [Tetrapisispora blattae CBS 6284]
Length = 480
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 23/185 (12%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK-------YSTFHPVTNPYIFEMEGKLL 209
SI ++++PGE DP++ PQQP + LF + K TNPY ++E +
Sbjct: 298 SIPIEIIPGEKDPSDKGWPQQPFNKSLFGDELKPYFDVINDELLKCGTNPYSIKLEQYNI 357
Query: 210 MGTSGQPVSDIAKF-------------SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFY 256
+ TSG + DI K+ + + LDI+E T+R ++AP APDT+ YP+
Sbjct: 358 LITSGTNIDDICKYIVTDDGEDNDEKADTIEHRLDIMESTMRWQNIAPNAPDTIISYPYL 417
Query: 257 DNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
+ DP I++ P++Y GNQ +F + + D N+++ISVP F S+ V I++L TL+C+
Sbjct: 418 NKDPFILDEWPNLYVVGNQKEFGVRDM---TDPNIKIISVPVFSSTGEVVIMDLETLDCN 474
Query: 317 SLVVE 321
L E
Sbjct: 475 VLKFE 479
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 16 SKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEI-SEELKLV 74
SK+ + + K V ++ D+ E C IGT++ + KPN+ +EI S++
Sbjct: 68 SKWNSNGFTLSNKKVVEKKRVLDV--QGNEPCWCIGTIYCEMKFKPNVFEEIVSDQYSNT 125
Query: 75 PQPQHTHFVSD---SDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKV 129
++ +D SDE++LEDE RI L G + I N +TG VV + G G F+V
Sbjct: 126 NNIKNIKNYTDPDGSDEIMLEDESGRIILCGEL-IKNTPFITGTVVGLLGMEAEAGSFQV 184
Query: 130 SDVCYATPV 138
D+CY +
Sbjct: 185 LDICYPQAI 193
>gi|299753847|ref|XP_001833575.2| DNA polymerase subunit delta-2 [Coprinopsis cinerea okayama7#130]
gi|298410490|gb|EAU88120.2| DNA polymerase subunit delta-2 [Coprinopsis cinerea okayama7#130]
Length = 537
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 38/202 (18%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME----------- 205
S+ + ++PGEFDP+ T LPQ+PL +F A K TF +NP +
Sbjct: 292 SLPIHVLPGEFDPSATILPQRPLPRAMFGPAGKQPTFFCESNPTYLRIAPGEIVQDNSVP 351
Query: 206 -----------GKLLMGTSGQPVSDIAKF-SNLSNP-LDILEYTLRCGHVAPTAPDTLAC 252
+ L+ SGQP++D+ ++ N SN L ILE TL+ H+APTAPDTL C
Sbjct: 352 EEQASNQRVKGARTLLINSGQPLNDLFRYLPNKSNSRLAILESTLKWRHMAPTAPDTLWC 411
Query: 253 YPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIE--------------KDKNVRLISVPD 298
+P+ DP I+ PD+Y G Q +F TK +E++ K R+I VP
Sbjct: 412 HPYVSEDPFILYELPDLYIVGGQRRFGTKLVEVDERSSGATNGQSQGGKKSRCRIILVPH 471
Query: 299 FFSSRTVAILNLSTLECHSLVV 320
F + + ++NL TL+ L +
Sbjct: 472 FSRTGVLVLVNLKTLDVKCLQI 493
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-ID 105
C IIGT++ LKPN++++++ + + P F S +D+++LEDE RI L G+ +
Sbjct: 76 CYIIGTVYMEMPLKPNVMEDLTRDRSIQAPPPPAKFYSPTDKVMLEDESGRIHLVGDCLA 135
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR-TTLSNNEN 150
VTGV++A G NG+F+V D+C A F P+ ++L+ +E+
Sbjct: 136 DKRLVTGVIIAALGMETPNGEFEVVDICTAG--FPPQPSSLAQDED 179
>gi|66359782|ref|XP_627069.1| DNA polymerase delta2, inactive calcineurin like phosphatase
subunit [Cryptosporidium parvum Iowa II]
gi|46228503|gb|EAK89373.1| DNA polymerase delta2, inactive calcineurin like phosphatase
subunit [Cryptosporidium parvum Iowa II]
Length = 475
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 7/167 (4%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+I + +MPGE DP +LPQ P P +F + Y +F+ TNP +F + + G SGQ
Sbjct: 304 STISLAIMPGEDDPVPISLPQPPFQPYIFKNSRNYQSFNSFTNPCLFSINNVRVTGVSGQ 363
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII----ESCPDVYF 271
+S I+ FS+ S P+D L++ + ++APT PD + YPF+D DP + ES P V F
Sbjct: 364 CISKISLFSSYSKPIDALKFCVESRNIAPTCPDVIPTYPFFDRDPFALDYTDESFPQVIF 423
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
GNQS+F + + ++P+F ++ T+ +L++++ E ++
Sbjct: 424 AGNQSEFGSYRF---PNNGPLCFTIPEFSNNPTLVLLDINSYELKTI 467
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 36 LSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDELILED 93
L++L + E EC+I+G + K + +P IL E ++++ Q +++ S+ D++ +ED
Sbjct: 86 LNELKDMKIESECIIMGFVTKEMKNRPTILDEYLQDIEEATKNSQLSNYTSNDDKVYIED 145
Query: 94 ELQRIPLHGNIDI---HNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
RIPL D+ +N ++G ++A++G G F VSD+ +A+P
Sbjct: 146 SSSRIPLTLKEDVFSMNNLISGTILAVRGVQNSGGNFLVSDLTFASP 192
>gi|67608601|ref|XP_666890.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657959|gb|EAL36659.1| hypothetical protein Chro.80190 [Cryptosporidium hominis]
Length = 476
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 7/167 (4%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S+I + +MPGE DP +LPQ P P +F + Y +F+ TNP +F + + G SGQ
Sbjct: 305 STISLAIMPGEDDPVPISLPQPPFQPYIFKNSRNYQSFNSFTNPCLFSINNIRVTGVSGQ 364
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII----ESCPDVYF 271
+S I+ FS+ S P+D L++ + ++APT PD + YPF+D DP + ES P V F
Sbjct: 365 CISKISLFSSYSKPIDALKFCVESRNIAPTCPDVIPTYPFFDRDPFALDYTDESFPQVIF 424
Query: 272 TGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
GNQS+F + + ++P+F ++ T+ +L++++ E ++
Sbjct: 425 AGNQSEFGSYRF---PNNGPLCFTIPEFSNNPTLVLLDINSYELKTI 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 36 LSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDELILED 93
L++L + E EC+I+G + K + +P IL E ++++ Q +++ S+ D++ +ED
Sbjct: 87 LNELKDMKMESECIIMGFVTKEMKNRPTILDEYLQDIEETTKNSQLSNYTSNDDKVYIED 146
Query: 94 ELQRIPLHGN---IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
RIPL ++N ++G ++A++G G F VSD+ +A+P
Sbjct: 147 SSSRIPLTLKEEVFSVNNLISGTILAVRGVQNSGGNFLVSDLTFASP 193
>gi|302662784|ref|XP_003023043.1| hypothetical protein TRV_02865 [Trichophyton verrucosum HKI 0517]
gi|291187019|gb|EFE42425.1| hypothetical protein TRV_02865 [Trichophyton verrucosum HKI 0517]
Length = 573
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 104/214 (48%), Gaps = 59/214 (27%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------------STFHPVTNPYI 201
SI V LMPGE DPAN +LPQQ +H + P + Y VTNP+
Sbjct: 336 SIPVTLMPGETDPANFSLPQQEIHTAMLPRSKIYCAPIAPKRQALPSEPGWLDNVTNPWE 395
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNL-------------SNPLDILEYTL--RCGHVAPTA 246
++EG GTSGQ V D+ ++ NL L ++E+ L RCG PTA
Sbjct: 396 GDIEGWRFWGTSGQNVDDVLRYVNLEELEDDEVEDIENGARLKLMEHLLKWRCG--VPTA 453
Query: 247 PDTL--------------------ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE-- 284
PDT+ CYP+ D DP +I+SCP V+FTGNQ +F++ IE
Sbjct: 454 PDTICKSPSHSAHHAAGSLLTVDPGCYPYQDKDPFVIQSCPHVFFTGNQPRFQSTIIEGG 513
Query: 285 -IEKDKN----VRLISVPDFFSSRTVAILNLSTL 313
D++ VRLI++P F + + +L+ TL
Sbjct: 514 DWGSDEDSITKVRLIALPKFHETGEIVLLDTETL 547
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 49 IIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILEDELQRIPLHGNI 104
I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++EDE R+ L G++
Sbjct: 100 IVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVEDESGRLVLTGSL 159
Query: 105 DIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
VTGVVVA+ GT +G+F+V D+
Sbjct: 160 LQSTFLVTGVVVAVLGTENADGQFEVVDI 188
>gi|156088409|ref|XP_001611611.1| DNA polymerase alpha subunit B family protein [Babesia bovis]
gi|154798865|gb|EDO08043.1| DNA polymerase alpha subunit B family protein [Babesia bovis]
Length = 425
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 27/176 (15%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SI VDLMPG DP+N +PQQP+HP +S+YS+F TNPY F ++G +GTS Q
Sbjct: 253 GSIPVDLMPGNDDPSNRNIPQQPIHPTFLEHSSRYSSFQSTTNPYAFSVDGIRFLGTSSQ 312
Query: 216 PVSDIAKFSNLSNP----------LDILEYTLRCGHVAPTAPDTLACYP-------FYDN 258
V I ++S+L+ L+ L T +APTAPDTL C+P DN
Sbjct: 313 AVRGICEYSHLNELGMLRDSNLTFLEALRLTASARFIAPTAPDTLGCHPEAAVLHLTEDN 372
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+ P V F+GN ++ T T+ D RLI VP F V +++LSTLE
Sbjct: 373 E------FPHVMFSGNSHEYATSTM----DGLPRLICVPAFSKQPCVILVSLSTLE 418
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI- 104
+CVIIGTL+K +L+P+ L+E SEELKL QP + S D L +ED+ R+ + G+I
Sbjct: 80 DCVIIGTLYKDMKLRPSPLEEYSEELKLR-QPMKAKYTSPDDRLFIEDQSIRVAIRGSIL 138
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP---VFNPRTTLSNNENKYVNHSS 157
D VTG+V+ +KG G+F+ D + P PR+ E KYV S
Sbjct: 139 DPQRLVTGLVICLKGRINDQGEFECEDYMHPGPPLMCLEPRS-----EEKYVAFVS 189
>gi|403222064|dbj|BAM40196.1| DNA polymerase delta small subunit [Theileria orientalis strain
Shintoku]
Length = 420
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 23/214 (10%)
Query: 105 DIHNQVTGVVVAIKGTPVGNGK-FKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLM 163
+ + ++ +VVA G N + K SD+ YA SSI VDLM
Sbjct: 217 EFNKKLVRLVVAGNGIGECNAESLKNSDIFYAQLA-----------------SSINVDLM 259
Query: 164 PG--EFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
PG E DP N LPQQ ++P L + +Y TF TNPY F ++G +G SGQ V++I
Sbjct: 260 PGNSELDPTNGNLPQQVINPVLMEHSKRYGTFRSTTNPYFFSVDGVRFLGVSGQSVANIC 319
Query: 222 KFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES-CPDVYFTGNQSKFET 280
KFS LS ++ L R +APT D+L C+ D + +S P V+F+GN +F
Sbjct: 320 KFSRLS-EIEALRLVARSRCIAPTGTDSLPCHSELDVFNLTEDSEYPHVFFSGNCKEFAA 378
Query: 281 KTIEIEKDKNV-RLISVPDFFSSRTVAILNLSTL 313
+E + RL+ VP F + T+ +++LSTL
Sbjct: 379 GEVENGNGTKLPRLVCVPSFKNDPTLVLVSLSTL 412
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGN- 103
+CVIIGT+FKH + +P+ L+E +++ L V + + + D D L LED QR+ L G+
Sbjct: 77 KCVIIGTVFKHMKYQPSPLEEYTQKFNLMVKKEKRNEYTDDEDFLFLEDHTQRLMLIGDC 136
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS-NNENKYVNHSS 157
++ H V+G+V+A++G KF D Y P +L N+E K++ +S
Sbjct: 137 LNPHEFVSGLVIAVRGYMNEQMKFVTED--YTLPEVPDELSLQVNDEEKFIAFTS 189
>gi|302501704|ref|XP_003012844.1| hypothetical protein ARB_01095 [Arthroderma benhamiae CBS 112371]
gi|291176404|gb|EFE32204.1| hypothetical protein ARB_01095 [Arthroderma benhamiae CBS 112371]
Length = 574
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 103/214 (48%), Gaps = 59/214 (27%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------------STFHPVTNPYI 201
SI V LMPGE DPAN +LPQQ +H + P + Y VTNP+
Sbjct: 337 SIPVTLMPGETDPANFSLPQQEIHTAMLPRSKIYCPPIAPKRQALPSEPGWLDNVTNPWE 396
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNL-------------SNPLDILEYTL--RCGHVAPTA 246
++EG GTSGQ V D+ ++ NL L ++E+ L RCG PTA
Sbjct: 397 GDIEGWRFWGTSGQNVDDVLRYVNLEELEDDEVEDIENGARLKLMEHLLKWRCG--VPTA 454
Query: 247 PDTL--------------------ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE-- 284
PDT+ CYP+ D DP +I+SCP V+FTGNQ +F++ E
Sbjct: 455 PDTICKSPSHNAHHAAGSLLTVDPGCYPYQDKDPFVIQSCPHVFFTGNQPRFQSTIFEGG 514
Query: 285 ---IEKDK--NVRLISVPDFFSSRTVAILNLSTL 313
++D VRLI++P F + + +L+ TL
Sbjct: 515 DWGTDEDSITKVRLIALPKFHETGEIVLLDTETL 548
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 49 IIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILEDELQRIPLHGNI 104
I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++EDE R+ L G++
Sbjct: 100 IVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVEDESGRLVLTGSL 159
Query: 105 DIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
VTGVVVA+ GT +G+F+V D+
Sbjct: 160 LQSTFLVTGVVVAVLGTENADGQFEVVDI 188
>gi|241169598|ref|XP_002410434.1| DNA polymerase delta small subunit, putative [Ixodes scapularis]
gi|215494812|gb|EEC04453.1| DNA polymerase delta small subunit, putative [Ixodes scapularis]
Length = 416
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 208 LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
L++GTSGQ VSD+ +FSN+ +PLD+LE TL+ H+APTAPDTL+CYPF D DP I+++CP
Sbjct: 330 LVLGTSGQTVSDVRRFSNIDDPLDVLEKTLQWRHMAPTAPDTLSCYPFLDKDPFIVDACP 389
Query: 268 DVYFTGNQSKFETKTIE 284
+YF GNQ + T+T +
Sbjct: 390 HLYFVGNQDSYATRTFK 406
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 24 EIEKGKS-VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 82
E + GK V V L DL E + V++GTLFK +L+P+ILKEISEE + PQP+ TH
Sbjct: 61 EQKWGKQKVQVTSLGDLVED--KRSVVVGTLFKVMELQPSILKEISEEHHVAPQPRRTHL 118
Query: 83 VSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+SD L+LED+ QR+PL GNID+ VTG+ VA+ G +G+F V D+CYA
Sbjct: 119 TDNSDSLVLEDDRQRLPLSGNIDVAAHVTGIPVAVLGRVGDDGRFAVEDICYA 171
>gi|150863804|ref|XP_001382402.2| DNA polymerase delta small subunit (Hydroxyurea sensitive protein
HYS2) [Scheffersomyces stipitis CBS 6054]
gi|149385060|gb|ABN64373.2| DNA polymerase delta small subunit (Hydroxyurea sensitive protein
HYS2) [Scheffersomyces stipitis CBS 6054]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 139 FNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---STFHP 195
+NP + + +E S+ V +MPG D LPQQPLH LF ++Y
Sbjct: 289 YNPESLVKFDEFLREILVSLPVSVMPGNNDMGEICLPQQPLHKSLFHSNARYLNGEYLER 348
Query: 196 VTNPYIFEMEGKLLMGTSGQPVSDIAKF---SNLSNP---LDILEYTLRCGHVAPTAPDT 249
+TNPY F ++GTSGQ V DI K+ + + P L I+E ++ + PTAPDT
Sbjct: 349 LTNPYWFNFGELRVLGTSGQNVHDILKYLSKNTTAAPELILKIMESHIKWQNFIPTAPDT 408
Query: 250 LACYPFYDNDPM-IIESCPDVYFTGNQSKFETK-----TIEIEKDKNVRLISVPDFFSSR 303
L CYPF ++DP +++ P VYF GNQ ++ ++ + +VRL+SVP F +
Sbjct: 409 LYCYPFDNSDPFTLVDETPHVYFVGNQQQYASEVYTYASTTTGNSGSVRLVSVPRFSETG 468
Query: 304 TVAILNLSTLE 314
+ +L+L TLE
Sbjct: 469 ELVLLDLDTLE 479
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNIL----KEISEELKLVPQPQHTHFVSDSDE---LIL 91
L+ T + C ++GT+F + K NI K I + L LVP +V D + +L
Sbjct: 90 LDITSGKLCWVVGTVFCDLKDKLNIFQDVEKGIDDVLPLVPD----SYVGDDENSMTTML 145
Query: 92 EDELQRIPLHGN--IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNE 149
EDE R LH + + VTG +V + G + G F++ D+ Y TL +E
Sbjct: 146 EDESGRAILHNEEFLSKNILVTGCIVGVLGIEISAGIFEIMDIVYPEASPQKPLTLKASE 205
Query: 150 NK 151
K
Sbjct: 206 GK 207
>gi|409082633|gb|EKM82991.1| hypothetical protein AGABI1DRAFT_118391 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 520
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 20/182 (10%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEAS-KYSTFHPVTNPYIFEMEG-------KLLMG 211
+ ++PG DP T +PQQP +F +AS ++STFH +NP + + ++
Sbjct: 301 IHILPGPGDPTGTMMPQQPFPRGIFGDASTRFSTFHLESNPAYINIASTSQPSCKRHILV 360
Query: 212 TSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
SGQP+ D+ K+ L P L +LE TLR H+APTAPDTL C+P++ DP +I P
Sbjct: 361 NSGQPLDDMFKY--LPTPPVTRLSVLESTLRWRHMAPTAPDTLWCHPYFVADPFVIRETP 418
Query: 268 DVYFTGNQSKFETKTI----EIEKDKNVRLISVPDFFSSRTVAILNLSTLE--CHSLVVE 321
+Y G Q +F T I +I + R++ VP+F S + ++N TLE C + V+
Sbjct: 419 HLYVVGGQPEFGTNLITDETQIGRRIKSRIVLVPNFAKSGMLVVVNAKTLEVRCVNFAVD 478
Query: 322 DL 323
+
Sbjct: 479 GM 480
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
GK V V ++ D+ +++ C IIGT++ H LKPN++ +I+ + + P P T F SD+D
Sbjct: 70 GKPVMVPRVLDV--INSQLCYIIGTVYLHMPLKPNVMIDIARDHSIPPPPPPTKFYSDND 127
Query: 88 ELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
++LEDE RI L G + N VTG+++ + G G FKV D+C+
Sbjct: 128 SIMLEDESGRIRLVGEVLKGKNIVTGIIIGVLGAETAEGDFKVVDICF 175
>gi|344300780|gb|EGW31101.1| hypothetical protein SPAPADRAFT_63028 [Spathaspora passalidarum
NRRL Y-27907]
Length = 427
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S+ V +MPG DP LPQQPLH L S +TNP ++G ++GTSGQ
Sbjct: 291 SLPVAVMPGSNDPGEICLPQQPLHRSLLGNFSYGDRLTRLTNPQWISIDGVKVLGTSGQN 350
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCPDVYFTGNQ 275
V DI K++ S DI++ +++ ++APTAPDTL CYP+ + DP I+ + P VYF GNQ
Sbjct: 351 VDDIKKYAKRSEVTDIMKASIKWQNLAPTAPDTLYCYPYDNADPFILTDEVPHVYFVGNQ 410
Query: 276 SKFETKTIE 284
K+ ++ +
Sbjct: 411 EKYASEVFQ 419
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGN- 103
C +IGT++ K NILK++ + V +VS+ + ++LEDE R LHG+
Sbjct: 90 CWVIGTVYIDAPGKLNILKDVENGVDDVLPGVPEAYVSEENTGVVMLEDESGRAILHGSE 149
Query: 104 -IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV 153
+D + VTG VV + G V G F++ DV Y + + N +K V
Sbjct: 150 FLDKNLLVTGCVVGVLGIEVQAGVFEIMDVVYPASAPQSKRAVDNEPSKIV 200
>gi|392567417|gb|EIW60592.1| hypothetical protein TRAVEDRAFT_165502 [Trametes versicolor
FP-101664 SS1]
Length = 536
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 49/211 (23%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------------ 204
SI V L+PG DPA T LPQQPL +F AS Y+TF +NP ++
Sbjct: 312 SIPVHLLPGPSDPAATILPQQPLPRAMFGGASHYATFLSESNPTYIQLAPNDPSAQSSSR 371
Query: 205 --------------------EG-----KLLMGTSGQPVSDIAKF--SNLSNPLDILEYTL 237
EG + + SGQPV D+ K+ S + + ++E TL
Sbjct: 372 ASQPGASSSKPKTNGTSAASEGTTRPTRTIFVHSGQPVDDMFKYVPSPPISRMTLVEATL 431
Query: 238 RCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE----------IEK 287
R H+APTAPDTL C+P++ DP +I PDVY GNQ F TK +
Sbjct: 432 RWRHMAPTAPDTLWCHPYFAKDPFVITQTPDVYVVGNQPAFATKLVRDDEQDEDESGARA 491
Query: 288 DKNVRLISVPDFFSSRTVAILNLSTLECHSL 318
K R++ +P F S T+ ++N+ TL +
Sbjct: 492 QKRCRIVLLPSFKDSGTLVLVNMRTLAVRKV 522
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-ID 105
C IIGT++ LKPN+L++++ + L P F SD D ++LEDE RI L G+ I
Sbjct: 88 CFIIGTVYMDMPLKPNVLEDVARDRSLPAPPPREKFYSDEDSIMLEDESGRICLVGDRIR 147
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
VTGV++ G NG F+V D+CY
Sbjct: 148 SACLVTGVILGALGIETHNGDFEVVDLCY 176
>gi|426200498|gb|EKV50422.1| hypothetical protein AGABI2DRAFT_183500 [Agaricus bisporus var.
bisporus H97]
Length = 520
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 20/182 (10%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEAS-KYSTFHPVTNPYIFEMEG-------KLLMG 211
+ ++PG DP T +PQQP +F +AS ++STFH +NP + + ++
Sbjct: 301 IHILPGPGDPTGTMMPQQPFPRGIFGDASTRFSTFHLESNPAYINITSTSQPSCKRHILV 360
Query: 212 TSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
SGQP+ D+ K+ L P L +LE TLR H+APTAPDTL C+P++ DP +I P
Sbjct: 361 NSGQPLDDMFKY--LPTPPVTRLSVLESTLRWRHMAPTAPDTLWCHPYFVADPFVIRETP 418
Query: 268 DVYFTGNQSKFETKTI----EIEKDKNVRLISVPDFFSSRTVAILNLSTLE--CHSLVVE 321
+Y G Q +F T I +I + R++ VP+F S + ++N TLE C + V+
Sbjct: 419 HLYVVGGQPEFGTNLITDETQIGRRIKSRIVLVPNFAKSGMLVVVNAKTLEVRCVNFAVD 478
Query: 322 DL 323
+
Sbjct: 479 GM 480
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
GK V V ++ D+ +++ C IIGT++ H LKPN++ +I+ + + P P T F SD+D
Sbjct: 70 GKPVMVPRVLDV--INSQLCYIIGTVYLHMPLKPNVMIDIARDHSIPPPPPPTKFYSDND 127
Query: 88 ELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
++LEDE RI L G + N VTG+++ + G G FKV D+C+
Sbjct: 128 SIMLEDESGRIRLVGEVLKGKNIVTGIIIGVLGAETAEGDFKVVDICF 175
>gi|225680909|gb|EEH19193.1| DNA polymerase subunit delta-2 [Paracoccidioides brasiliensis Pb03]
Length = 738
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 81/156 (51%), Gaps = 32/156 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHP---------------VTNPY 200
SI + LMPGE DPAN +LPQQ +H +FP + Y S P VTNP+
Sbjct: 304 SIPITLMPGETDPANFSLPQQEIHRAMFPRSKAYCSAARPGTTGEPTAEPGWLDNVTNPW 363
Query: 201 IFEMEGKLLMGTSGQPVSDIAKF-----------SNLSNP-----LDILEYTLRCGHVAP 244
++EG G SGQ V D+ ++ N SN L ++E LR P
Sbjct: 364 EGDVEGWRFWGCSGQNVDDMLRYIDLETEGDGLGGNESNKDGEARLRLMEAMLRWRCAVP 423
Query: 245 TAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFET 280
TAPDTL CYP+ +DP ++SCP V+F GNQ +F T
Sbjct: 424 TAPDTLWCYPYQTHDPFTLQSCPHVFFAGNQPRFRT 459
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL----ILEDE 94
L+ E C + GT++ LKPNIL +IS+E P ++ S++ +LEDE
Sbjct: 48 LDVRQGELCWVAGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQASAKTMLEDE 107
Query: 95 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY----ATPVFNPRTTLSNNE 149
R+ L G + VTG +VA+ GT NG F+V D+ A P R++ + E
Sbjct: 108 SGRLQLTGTLLQSALLVTGAIVAVLGTENVNGDFEVIDIKVPDLPAQPQRWERSSAAPQE 167
Query: 150 NKYVNHSSIE 159
+ H S+E
Sbjct: 168 SAKRKHDSLE 177
>gi|156054518|ref|XP_001593185.1| hypothetical protein SS1G_06107 [Sclerotinia sclerotiorum 1980]
gi|154703887|gb|EDO03626.1| hypothetical protein SS1G_06107 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 475
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
N + + +I VGN + Y +NP T + S+ + L+PG
Sbjct: 268 NSIASDLDSIAHDTVGNTRKAQKKYGYDASAYNPAPTAHFDNFLAELLPSLPITLLPGAS 327
Query: 168 DPANTTLPQQPLHPCLFPEASKY--------------STFHPVTNPYIFEMEGKLLMGTS 213
DPAN +LPQQP+HP +FP+A Y F VTNP+ E+EG ++GT+
Sbjct: 328 DPANASLPQQPIHPAMFPQARAYCGSAPSVIGEEREAGWFDIVTNPWEGEIEGWRVLGTA 387
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
GQ V D+ K+ + L ++E R APTAPDTL
Sbjct: 388 GQNVDDVFKYVEGEDRLSMMEAMCRWRCCAPTAPDTLC---------------------- 425
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECH 316
NQ F+T +IE + VRLIS+P F + + +L+ TLE
Sbjct: 426 NQPSFDTASIEGPNGQTVRLISIPSFEETGEIVLLDTETLEAE 468
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDELQRIPL-HGN 103
C + GT++ + LKPNIL++IS++ + P ++S + DE++LEDE R+ L G
Sbjct: 95 CWVAGTIYMNMPLKPNILEDISKDHWISAPPPRGKYLSGNGDDEIMLEDESGRLRLIGGQ 154
Query: 104 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFNPRTTLSN 147
+ + VTG +VA+ GT NG F+V D+ P PR +S
Sbjct: 155 LSMELLVTGCIVAVMGTENANGDFEVVDIKVPDLPPQEPRWEMSG 199
>gi|242209589|ref|XP_002470641.1| predicted protein [Postia placenta Mad-698-R]
gi|220730320|gb|EED84179.1| predicted protein [Postia placenta Mad-698-R]
Length = 523
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 43/205 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------EG---- 206
++ + ++PG DPA T LPQQP +F A+ +++F TNP + EG
Sbjct: 306 TMPIHVLPGASDPAGTLLPQQPFPRAMFGSAAAFASFTCETNPTYLRVGPSPNTEGTPDG 365
Query: 207 -----------------------KLLMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCGH 241
+ + +SGQPV D+ K+ S LS L I E +LR H
Sbjct: 366 EKGKQKASASASKSAQAVSATPFRTFLVSSGQPVDDMLKYLPSPLSTRLSIAEASLRWRH 425
Query: 242 VAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKD--------KNVRL 293
+APTAPDTL C+P++ +DP +I PDVY G Q +F T+ E ++ K R+
Sbjct: 426 IAPTAPDTLWCHPYFGSDPFVISETPDVYIVGCQPRFGTRVGEEGEEDMEGEGGVKRCRV 485
Query: 294 ISVPDFFSSRTVAILNLSTLECHSL 318
+ VP F + T+ +LN+ TL ++
Sbjct: 486 VLVPGFRETGTLVLLNMRTLAVKTV 510
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHG-NIDI 106
+IGT++ +KPN+L++++ + L P P+ T + S D+ +LEDE RI L G I
Sbjct: 77 VIGTVYMDMPMKPNVLEDLARDHSLPAPAPRMT-YCSQDDQPMLEDESCRIALVGERIRS 135
Query: 107 HNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNEN 150
VTGVV+ I G G+F+V D+C A P + L+ E+
Sbjct: 136 ARLVTGVVLGILGIETSGGEFEVVDICTAGMAPQPYSDLNWGES 179
>gi|336372615|gb|EGO00954.1| hypothetical protein SERLA73DRAFT_159552 [Serpula lacrymans var.
lacrymans S7.3]
Length = 543
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 97/192 (50%), Gaps = 36/192 (18%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME---------- 205
S + V ++PG DPA LPQQP +F +AS TF+ TNP +E
Sbjct: 330 SVLPVHILPGPDDPAGAILPQQPFPRAMFGKASSSETFYCETNPVWLNIECENTKHLPPS 389
Query: 206 ---------------GKLLMGTSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTA 246
+ ++ TSGQPV D+ K+ LS+P L I TL H+APTA
Sbjct: 390 KRTSTSRSKSSSLHLKRNILITSGQPVLDMYKY--LSSPPSTCLSIAMSTLMWQHIAPTA 447
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTI-----EIEKDKNVRLISVPDFFS 301
PDTL C+PF D DP ++ PD+Y GN +F T + + +K++ R++ VP F
Sbjct: 448 PDTLWCHPFRDRDPFVLHQTPDIYVVGNAPEFATALVRSGDEDAKKEQRCRVVLVPSFAE 507
Query: 302 SRTVAILNLSTL 313
+ + ++NL TL
Sbjct: 508 TGLLVLVNLRTL 519
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
GK V ++ D+ ++ C I+GT++ LKPN+L++I + + P P F SD D
Sbjct: 97 GKPTYVRRVLDV--VKSQLCWIVGTVYIDMPLKPNVLQDIGRDHSIAPPPPPVKFNSDKD 154
Query: 88 ELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
++LEDE RI L G + + VTGV+VA+ G NG+F+ DV A
Sbjct: 155 VVMLEDESGRITLVGEKVKVACLVTGVIVAVLGVETLNGEFEAIDVSIA 203
>gi|336385426|gb|EGO26573.1| hypothetical protein SERLADRAFT_414551 [Serpula lacrymans var.
lacrymans S7.9]
Length = 515
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 97/192 (50%), Gaps = 36/192 (18%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME---------- 205
S + V ++PG DPA LPQQP +F +AS TF+ TNP +E
Sbjct: 302 SVLPVHILPGPDDPAGAILPQQPFPRAMFGKASSSETFYCETNPVWLNIECENTKHLPPS 361
Query: 206 ---------------GKLLMGTSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTA 246
+ ++ TSGQPV D+ K+ LS+P L I TL H+APTA
Sbjct: 362 KRTSTSRSKSSSLHLKRNILITSGQPVLDMYKY--LSSPPSTCLSIAMSTLMWQHIAPTA 419
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTI-----EIEKDKNVRLISVPDFFS 301
PDTL C+PF D DP ++ PD+Y GN +F T + + +K++ R++ VP F
Sbjct: 420 PDTLWCHPFRDRDPFVLHQTPDIYVVGNAPEFATALVRSGDEDAKKEQRCRVVLVPSFAE 479
Query: 302 SRTVAILNLSTL 313
+ + ++NL TL
Sbjct: 480 TGLLVLVNLRTL 491
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
GK V ++ D+ ++ C I+GT++ LKPN+L++I + + P P F SD D
Sbjct: 69 GKPTYVRRVLDV--VKSQLCWIVGTVYIDMPLKPNVLQDIGRDHSIAPPPPPVKFNSDKD 126
Query: 88 ELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
++LEDE RI L G + + VTGV+VA+ G NG+F+ DV A
Sbjct: 127 VVMLEDESGRITLVGEKVKVACLVTGVIVAVLGVETLNGEFEAIDVSIA 175
>gi|156094127|ref|XP_001613101.1| DNA polymerase delta small subunit [Plasmodium vivax Sal-1]
gi|148801975|gb|EDL43374.1| DNA polymerase delta small subunit, putative [Plasmodium vivax]
Length = 514
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VDLMPGE DP++ LPQQP F A YS+F VTNPY+F ++G + SG+P
Sbjct: 340 AVYVDLMPGEKDPSDAILPQQPFPNLFFKTARSYSSFQCVTNPYLFSIDGVNVCCMSGEP 399
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII---ESCPDVYFTG 273
V++I +S + PLD L+ + ++PT+PDTL CYPF + DP + + P ++ G
Sbjct: 400 VNNIVSYSK-NCPLDALKMIAKSRILSPTSPDTLGCYPFIEKDPFCLPDDDKYPHIFVNG 458
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
N ++ E + + EK + L +P F + ++N+ ++
Sbjct: 459 NCAQLEVQHLHGEKTLPL-LACLPSFDVTPKALLVNIRNMQ 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E C IGTLFK +L+P+IL E E+ + ++ D D L LEDE R+ L GNI
Sbjct: 162 ENCYCIGTLFKKMELRPSILNEYISEINEA-EDVVVNYSHDEDVLFLEDETARLKLEGNI 220
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ + VTG+ V IKGT + NG V ++ YA
Sbjct: 221 NSDHYVTGLTVIIKGTGMSNGSLYVEELIYA 251
>gi|148708618|gb|EDL40565.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_c [Mus musculus]
Length = 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ D
Sbjct: 74 GSRVEVKKLCELQPG--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|403416179|emb|CCM02879.1| predicted protein [Fibroporia radiculosa]
Length = 556
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 112/255 (43%), Gaps = 66/255 (25%)
Query: 128 KVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA 187
K + T F+P+ +L +E + ++ V ++PG DPA T LPQQP +F A
Sbjct: 290 KARRYGHDTANFSPQPSLILSEYLHDIARAMPVHILPGASDPAGTLLPQQPFPRAMFRGA 349
Query: 188 SKYSTFHPVTNPYIFEM----------------EGK----------------------LL 209
S +S+F TNP + +GK L
Sbjct: 350 SAFSSFSCETNPTYIHLGPSAFDALQETSPQNTKGKKASTSAFASGVPSASGSCTPSRTL 409
Query: 210 MGTSGQPVSDIAKFSNLSNP----LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES 265
+ +SGQPV D+ K+ LS+P L I TLR H+APTAPDTL C+P++ DP I
Sbjct: 410 LVSSGQPVDDMFKY--LSSPPATRLSIATSTLRWRHLAPTAPDTLWCHPYFGADPFAIRE 467
Query: 266 CPDVYFTGNQSKFETKTI----------------------EIEKDKNVRLISVPDFFSSR 303
PDVY GNQ F T+ + +DK R++ VP F +
Sbjct: 468 TPDVYVVGNQPGFGTRVVTERGWGTDSDAVSDEVEEEGLEGEGRDKRCRVVLVPGFRETG 527
Query: 304 TVAILNLSTLECHSL 318
+ +LN+ TL ++
Sbjct: 528 ILVLLNMRTLAVRTV 542
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-ID 105
C IIGT++ LKPN+L++++ + L + S+ D++ LEDE RI L G +
Sbjct: 89 CYIIGTVYLDMPLKPNVLEDLARDHSLPAPAPRPKYHSEDDQVTLEDESGRIVLVGAPLR 148
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHS-SIEVDLMP 164
VTGVV+ + G G+F+V DVCYA P + +S ++ + +++VD P
Sbjct: 149 AAQLVTGVVLGVLGAETNGGEFEVIDVCYAGMAPQPDSDVSWEQSGATGAADAMDVDGAP 208
>gi|402583229|gb|EJW77173.1| hypothetical protein WUBG_11918 [Wuchereria bancrofti]
Length = 393
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS-TFHPVTNPYIFEMEGKLLMGTSGQP 216
+EVD+MPG DP+ +PQQP+H +F SKY + VTNPY F +EG ++GTSG+
Sbjct: 277 LEVDVMPGLGDPSTYLMPQQPIHRAVFVMGSKYGRMLNLVTNPYEFSVEGVHILGTSGEC 336
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYF 271
+SD+ +++ N +++L L H+APT PDT+ +PF D DP IIES P + F
Sbjct: 337 LSDLKRYTKTLNGVELLSKILDWQHLAPTIPDTVDGFPFIDRDPFIIESFPHILF 391
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDS 86
G + +L+ + D E ++IGT+ K +L+P++L++++EE ++PQP + +
Sbjct: 58 GDGIEPCRLTKAKKDD--EVLVIGTITKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEE 115
Query: 87 DELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS 146
D + ED+ Q + L G+ + TG VV I G + N F+VS + + + P +
Sbjct: 116 DFVEFEDDDQIVRLSGDFVMDEVATGCVVGIYGRQLDNDIFQVSKMIWPSKAPQPTYPIL 175
Query: 147 NNENKYVNHSS 157
N+ ++Y+ S
Sbjct: 176 ND-DRYIAFVS 185
>gi|221055653|ref|XP_002258965.1| DNA polymerase delta small subunit [Plasmodium knowlesi strain H]
gi|193809035|emb|CAQ39738.1| DNA polymerase delta small subunit, putative [Plasmodium knowlesi
strain H]
Length = 477
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSD 219
VDLMPGE DP + LPQQP F + YS+F VTNPY+F ++ + SG+PV++
Sbjct: 312 VDLMPGENDPTDAILPQQPFPNLFFKTSRNYSSFQCVTNPYLFSIDNVNVCCMSGEPVNN 371
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE---SCPDVYFTGNQS 276
I +S ++PLD L + ++PT PDTL CYPF D DP ++ P ++ GN +
Sbjct: 372 IVSYSK-NSPLDALRMIAKSRILSPTCPDTLGCYPFVDQDPFCLQDDDKYPHIFVNGNCT 430
Query: 277 KFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+ E + + EK K L+ +P F + ++N+ ++
Sbjct: 431 ELEVQYMHEEK-KLPLLVCLPSFDVTPKALLVNIRNMQ 467
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 104
E C IGTLFK +L+P+IL E E+ + ++ D D L LEDE R+ L GNI
Sbjct: 131 ENCYCIGTLFKKMELRPSILNEYISEINET-EDIVVNYSHDEDVLFLEDETARLKLEGNI 189
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
+ + VTG+ V IKG+ + NG V ++ YA
Sbjct: 190 NSDHYVTGLTVIIKGSGMSNGSLYVDELIYA 220
>gi|395333295|gb|EJF65672.1| hypothetical protein DICSQDRAFT_165382 [Dichomitus squalens
LYAD-421 SS1]
Length = 520
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 44/204 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEG---------- 206
S+ V L+PG DPA T LPQQP+ +F AS Y+ F +NP +
Sbjct: 305 SLSVHLLPGPLDPAATILPQQPIPRAMFGGASHYANFSSESNPTYINVSPSREPPSTSRT 364
Query: 207 --------------------KLLMGTSGQPVSDIAKFSNLSNP----LDILEYTLRCGHV 242
+ ++ SGQP+ D+ K+ + P + + E TLR H+
Sbjct: 365 SQPGASSSKANGHVEKVDAVRSILVHSGQPLDDMFKY--VPTPPITRMALAEATLRWRHI 422
Query: 243 APTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTI--------EIEKDKNVRLI 294
APTAPDTL C+P++ DP +I PD+Y GNQ F TK + E K R++
Sbjct: 423 APTAPDTLWCHPYFAKDPFVIPETPDIYVVGNQPAFATKLVSDDGSADGEEGSPKRCRIV 482
Query: 295 SVPDFFSSRTVAILNLSTLECHSL 318
VP+F S + ++N+ TL+ +
Sbjct: 483 LVPNFRQSGVLVLVNMRTLDVRRV 506
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
F + +++EKGK C +IGT++ LKPN+L++I+ + + P
Sbjct: 75 FVPRVLDVEKGK----------------LCFVIGTVYMEMPLKPNVLEDIARDRSIPAPP 118
Query: 78 QHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 136
+ SDSD + LEDE RI L G+ + VTGV++ G G F+V D+CY
Sbjct: 119 PREKYYSDSDSVTLEDESGRICLVGSRVTSTCLVTGVILGALGIETHTGDFEVVDLCY-- 176
Query: 137 PVFNPRTT 144
P P+ T
Sbjct: 177 PGMAPQPT 184
>gi|149047648|gb|EDM00318.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_c [Rattus norvegicus]
Length = 369
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D
Sbjct: 74 GSQVEVKKLCELQPG--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDD 131
Query: 88 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
EL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 132 ELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVKDDGKFQVEDHCFA 179
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 156 SSIEVDLMPGEFDPANTTLPQ 176
+S+ VD+MPGEFDP N TLPQ
Sbjct: 288 ASVPVDVMPGEFDPTNYTLPQ 308
>gi|340052578|emb|CCC46859.1| putative DNA polymerase delta subunit 2 [Trypanosoma vivax Y486]
Length = 559
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 43/206 (20%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF------EME---GKL 208
IEVDLMPGE D PQQP+HP L P AS+ ST VTNPY F +ME GK
Sbjct: 345 IEVDLMPGENDMTTAFHPQQPIHPLLLPAASRCSTVRLVTNPYEFSLFPGDDMETPVGKS 404
Query: 209 L----------MGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDN 258
L +SG ++ + + ++ S+ LD + LR G PTAP+TL CYPF D+
Sbjct: 405 LDDDTKGETTFFVSSGSALNSLCRETSFSSRLDAMSMILRSGCACPTAPNTLFCYPFVDS 464
Query: 259 DPMIIESCPDVYFTGNQSKFETKTIEIEK-----DKN-------------------VRLI 294
DP + + P + +Q ++ET+ ++ D N +RL+
Sbjct: 465 DPFVFQRAPHCFVCCDQPRWETRWEPLDAFAPVDDSNRTTLDEECSAAASGVGSDGIRLV 524
Query: 295 SVPDFFSSRTVAILNLSTLECHSLVV 320
VP F + +A++++++ + H+ V
Sbjct: 525 CVPPFSQTGILALIDINSPKLHTTYV 550
>gi|401408277|ref|XP_003883587.1| hypothetical protein NCLIV_033420 [Neospora caninum Liverpool]
gi|325118004|emb|CBZ53555.1| hypothetical protein NCLIV_033420 [Neospora caninum Liverpool]
Length = 626
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 40/199 (20%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLL------ 209
SSI +DLMPG DP +LPQQPLH L P + Y + V+NP+ F ++ ++
Sbjct: 419 SSIPIDLMPGSGDPTTYSLPQQPLHAALLPISRTYGSIRGVSNPHAFSLDKVVVAWCAFF 478
Query: 210 -------MGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMI 262
+G+SGQPVS++ FS+LS PL+ L +APTAPD+L+ YPF DP
Sbjct: 479 LPFQIRFIGSSGQPVSNVCAFSDLS-PLEALRLCAEGRCLAPTAPDSLSLYPFVREDPCC 537
Query: 263 IESCPD---VYFTGNQSKFETKTI----------------------EIEKDKNVRLISVP 297
I + PD VYF+ N + + E E + L+ +P
Sbjct: 538 I-APPDYHHVYFSANHEALSFERLQKITRNVQTTSADGAEKAMDVDEAEDSEGPLLLCIP 596
Query: 298 DFFSSRTVAILNLSTLECH 316
F + T+ +++L +L H
Sbjct: 597 SFAKTSTLVLVDLQSLAVH 615
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 33/120 (27%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI------ 98
++CVI+GTLFK LKP+ LKE +++++ P F+SDSD L LED+ R+
Sbjct: 166 QQCVIVGTLFKDMVLKPSALKEYLDDIQVQVTP--NSFLSDSDSLFLEDQTARVRLVVDA 223
Query: 99 --PLHGNID-----------------------IHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
P + D ++ VTG++VA++G NG+F V D C
Sbjct: 224 APPASSDADEETAEETHAEGDAREETEGHQLRVNGVVTGLIVAVRGVATDNGRFLVQDFC 283
>gi|429327599|gb|AFZ79359.1| DNA polymerase delta small subunit, putative [Babesia equi]
Length = 414
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
SSI VDLMPG DP N LPQQ + P + +Y TF TNPY+F ++ +G SGQ
Sbjct: 249 SSIPVDLMPGAKDPTNANLPQQMISPSFMDHSKRYGTFKSTTNPYLFTVDDVRFLGISGQ 308
Query: 216 PVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES-CPDVYFTGN 274
V DI +S LS LD L+ +APT D+L C+ D + + P V+F+GN
Sbjct: 309 SVQDICNYSRLSE-LDALKIIADSRCIAPTGIDSLPCHSEMDVFNLADDDEYPHVFFSGN 367
Query: 275 QSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
+F T I ++K ++I VP F S T+ +++LS+L+
Sbjct: 368 AKEFAAGT--IGENKLPKVICVPSFNDSPTLVLVSLSSLD 405
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-I 104
C++IGT++K + P+ L + + + T F +D D L LED+ QR+ + G+ +
Sbjct: 77 RCIVIGTVYKEMKRHPSPLNAYKHDFAF-KKEEITEFTNDDDYLTLEDQTQRLIITGDFM 135
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 137
D H +G+V+A+KG G F D +A P
Sbjct: 136 DPHRFTSGMVLAMKGYITPEGLFNAEDYTFAGP 168
>gi|256085258|ref|XP_002578839.1| DNA polymerase delta small subunit [Schistosoma mansoni]
gi|353228760|emb|CCD74931.1| putative DNA polymerase delta small subunit [Schistosoma mansoni]
Length = 537
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 27/198 (13%)
Query: 146 SNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS------TFHPVTNP 199
S ++ + + I +DL+PG DP + +PQQP+H P A S TNP
Sbjct: 325 SGCKDNGTDFNGISIDLLPGPSDPTSVLMPQQPIHSAALPCAVSRSGGVGSGNLCGRTNP 384
Query: 200 YIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDND 259
Y F + + ++ TSGQ V+++ +++ L N D +E TL GH+APT PDTL YP + D
Sbjct: 385 YSFMLRNRSILATSGQGVNELYRYTKLENACDRMETTLLWGHLAPTCPDTLGGYPMINVD 444
Query: 260 PMIIESC------------PDVYFTGNQSK----FETKTIEI--EKDKN---VRLISVPD 298
P+++ S PD+Y G QS+ + ++ E DKN L+SVP
Sbjct: 445 PLLLRSSSTSSAQNFSPDYPDIYVAGCQSEDQPSWRRARLKWNEEIDKNNCGCLLVSVPR 504
Query: 299 FFSSRTVAILNLSTLECH 316
F + ++ ++NL +L+C
Sbjct: 505 FDLTFSLVLINLKSLDCR 522
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 20/125 (16%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEIS--------EELKLVPQPQHT-- 80
+ V L+DLN E+C+IIGTLFK +LKP++L +I+ ++++ +
Sbjct: 65 IPVRTLADLN--GDEKCIIIGTLFKEMRLKPSVLHDIAAVEIENIESDIRISSTDTQSLV 122
Query: 81 HFVSDSDELILEDELQRIPLHGNIDIH------NQVTGVVVAIKGTPVGN--GKFKVSDV 132
H SD D L LEDE+QRI L I N VTGVVVA G + G F V D+
Sbjct: 123 HLTSDDDVLFLEDEVQRIALSFCSQISKLWSPANLVTGVVVAALGYEPESQPGSFCVEDM 182
Query: 133 CYATP 137
+ P
Sbjct: 183 LFLEP 187
>gi|449547653|gb|EMD38621.1| hypothetical protein CERSUDRAFT_123186 [Ceriporiopsis subvermispora
B]
Length = 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 47/207 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNP-YI-------------- 201
S+ + L+PG DP+ T LPQQ + +F A+ +S+F TNP YI
Sbjct: 309 SMPIHLLPGASDPSGTILPQQSVPRAMFGRAATFSSFSCETNPAYIRIGTGPATAPAAAP 368
Query: 202 ------------------FEMEGKLLMGTSGQPVSDIAKFSNLSNP----LDILEYTLRC 239
+ + L+ SGQP+ D+ K+ + P L + TL
Sbjct: 369 AVAPSKGKQAAASTSASTSDAPARTLLVHSGQPLDDLFKY--VPTPPVTRLALAARTLHW 426
Query: 240 GHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE--------IEKDKNV 291
HVAPTAPDTL C+P++ DP +I PD+Y GNQ +F T+ ++ E++K
Sbjct: 427 RHVAPTAPDTLWCHPYFTADPFVITQTPDIYVIGNQPEFATQLVKEEHAGEGAEEREKRC 486
Query: 292 RLISVPDFFSSRTVAILNLSTLECHSL 318
R++ VP F S T+ ++NL TL ++
Sbjct: 487 RVVLVPGFRESGTLVLVNLRTLAVKTV 513
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 87
G V ++ D+N+ + C IIGT++ LKPN+L+++ + L + S+ D
Sbjct: 74 GNPTYVPRVLDVNKG--QLCFIIGTVYMDMPLKPNVLEDLGRDHSLPAPAPRAKYNSEED 131
Query: 88 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLS 146
+++LEDE R+ L GN + VTGVV+ G G F+V D+C+A P + L
Sbjct: 132 KVMLEDESGRLCLVGNRVRDTPLVTGVVLGALGMETAGGDFEVVDLCFAGIAPQPSSGLP 191
Query: 147 NNE 149
+
Sbjct: 192 QRD 194
>gi|358333387|dbj|GAA51907.1| serine/threonine-protein kinase VRK1 [Clonorchis sinensis]
Length = 1281
Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 16/136 (11%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEA------SKYSTFHPVTNPYIFEMEGKLL 209
+ + VDL+PG D A+ LPQQP+HP FP A + TNPY + G+ +
Sbjct: 967 NGLPVDLLPGPSDAASQLLPQQPIHPSAFPLAVARAGGASCGGLCGRTNPYACCLFGRKI 1026
Query: 210 MGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC--- 266
+ TSGQ V+D++ +++L P D +E TL GH+APT PDTL YP ND +++E+
Sbjct: 1027 LATSGQAVNDLSLYTDLETPCDRMEATLLWGHLAPTCPDTLPGYPLLKNDLLLMETSSAD 1086
Query: 267 -------PDVYFTGNQ 275
PD+Y G Q
Sbjct: 1087 SRLSPDYPDIYVAGCQ 1102
>gi|392595944|gb|EIW85267.1| hypothetical protein CONPUDRAFT_141916 [Coniophora puteana
RWD-64-598 SS2]
Length = 517
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 32/191 (16%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKL--------- 208
+ V ++PG DP+ + LPQQP +F EA+ + TF TNP + L
Sbjct: 296 LPVHILPGPDDPSGSILPQQPFPRAMFGEAAGFDTFRCETNPVWLRVGSGLDPPEHDDDE 355
Query: 209 -------------LMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCGHVAPTAPDTLACY 253
+ +SGQP+ D+ K+ + S + + TL+ H+APTAPDTL C+
Sbjct: 356 PSTSKVAGNTVRSFLVSSGQPILDMYKYLPTPPSTLVTMAASTLKWRHMAPTAPDTLWCH 415
Query: 254 PFYDNDPMIIESCPDVYFTGNQSKFETKTI--------EIEKDKNVRLISVPDFFSSRTV 305
PF + DP ++ PDVY GN +F T + +D+ R++ VP F + +
Sbjct: 416 PFREKDPFVLRQTPDVYIIGNMPQFGTTLVYAGDKTEGRTTEDRPCRVVLVPSFLETGVL 475
Query: 306 AILNLSTLECH 316
++NL +L
Sbjct: 476 VLVNLRSLAVR 486
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQR 97
L+ ++ C IIGT++ LKPN+L+++S + P P+ F S +D +++ED R
Sbjct: 73 LDVVKSQLCWIIGTVYIDMPLKPNVLEDLSRNHSIPAPNPRE-KFYSSNDSVMIEDSSGR 131
Query: 98 IPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHS 156
I L G ++ VTGV+VA G G F+V D+C+A SN+E V+ S
Sbjct: 132 IKLVGAAVTKSRLVTGVIVAALGMETDKGDFEVVDLCFADLAPFAEEAPSNDETMDVDDS 191
Query: 157 S 157
S
Sbjct: 192 S 192
>gi|156844124|ref|XP_001645126.1| hypothetical protein Kpol_538p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115783|gb|EDO17268.1| hypothetical protein Kpol_538p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 474
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 27/191 (14%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY-------STFHPVTNPYIFEMEGKLL 209
S+ + LMP DP++ +LPQQP H LF + + TNP F+ G
Sbjct: 284 SLPIALMPSLNDPSDQSLPQQPFHKALFDMSLAHYFNEDNKQILSLTTNPSNFDFNGVDA 343
Query: 210 MGTSGQPVSDIAKF-------------------SNLSNPLDILEYTLRCGHVAPTAPDTL 250
+ SG ++DI K+ + + LD++E T++ ++ PT+PDTL
Sbjct: 344 LVISGDNINDICKYMIPYQESETDSQENKFDKLDTIEHRLDLMECTMKWQNIVPTSPDTL 403
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
YP+ ++DP + P VY GNQ + K ++I KDK +++ISVP + + +V IL+L
Sbjct: 404 WSYPYKESDPFNLTQWPHVYIVGNQPLYGAKDVQI-KDKTIKIISVPQYSETGSVVILDL 462
Query: 311 STLECHSLVVE 321
T + ++
Sbjct: 463 ETFNTEEIKIQ 473
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-S 86
GK+V V K L+ + C +GT++ + KPNIL E+ ++ P ++ S+ S
Sbjct: 79 GKTV-VEKQKVLDIQGNQPCWCVGTIYCEMKYKPNILNEVISDVYGAPDLVKSYTDSEGS 137
Query: 87 DELILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 134
DE++LEDE R+ L G+ VTG +V + G G F+V D+CY
Sbjct: 138 DEIMLEDESGRVLLVGDFITSTPFVTGAIVGLLGMEAEAGTFQVLDICY 186
>gi|407406419|gb|EKF30788.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi
marinkellei]
Length = 647
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 42/206 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFE-MEGK-------- 207
+IEVD+MPG+ D N PQQPLHP L PEA++ S+ VTNPY F GK
Sbjct: 432 TIEVDVMPGDQDVTNAFQPQQPLHPLLLPEAARRSSLKLVTNPYEFHAFPGKTPTAAAER 491
Query: 208 ----------------LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA 251
+ +SG ++D+++ + LD + LRCG PTAP+TL
Sbjct: 492 TATTTTTTTTMAEGGTIFFISSGSNLNDVSRETRYRTRLDAMSMLLRCGCACPTAPNTLF 551
Query: 252 CYPFYDNDPMIIESCPDVYFTGNQSKFETKTIE-----------------IEKDKNVRLI 294
YPF +DP + + P + +Q +T+ + +E VRLI
Sbjct: 552 SYPFKISDPFVFPNAPHCFVCCDQPDMQTRWVPLEGFNPAGEETTNEEALVEDSAGVRLI 611
Query: 295 SVPDFFSSRTVAILNLSTLECHSLVV 320
VP F + + ++++++ + ++VV
Sbjct: 612 CVPPFSQTGALVLVDVNSPQLDTVVV 637
>gi|71424337|ref|XP_812760.1| DNA polymerase delta subunit 2 [Trypanosoma cruzi strain CL Brener]
gi|70877580|gb|EAN90909.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi]
Length = 571
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 42/206 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------------ 204
+IEVD+MPG+ D N PQQPLHP L PEA++ S+ VTNPY F
Sbjct: 356 TIEVDVMPGDQDVTNAFQPQQPLHPLLLPEAARRSSLKLVTNPYEFHAFPCKKPTATATA 415
Query: 205 -------------EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA 251
G + +SG ++D+++ + LD + LRCG PTAP+TL
Sbjct: 416 ERTATTTTTTTAEGGTIFFISSGSNLNDVSRETRYRTRLDAMSMLLRCGCACPTAPNTLF 475
Query: 252 CYPFYDNDPMIIESCPDVYFTGNQSKFETKTI-----------------EIEKDKNVRLI 294
YPF DP + S P + +Q + +T+ + +E VRLI
Sbjct: 476 SYPFKILDPFVFPSAPHCFVCCDQPEMQTRWVPLEGFNPAGDDTTNEEAPVEDSAGVRLI 535
Query: 295 SVPDFFSSRTVAILNLSTLECHSLVV 320
VP F + + ++++++ + ++VV
Sbjct: 536 CVPPFSQTGALVLVDVNSPQLDTVVV 561
>gi|71650862|ref|XP_814120.1| DNA polymerase delta subunit 2 [Trypanosoma cruzi strain CL Brener]
gi|70879066|gb|EAN92269.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi]
Length = 636
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 44/208 (21%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFE-MEGK-------- 207
+IEVD+MPG+ D N PQQPLHP L PEA++ S+ VTNPY F GK
Sbjct: 419 TIEVDVMPGDQDVTNAFQPQQPLHPLLLPEAARRSSLKLVTNPYEFHAFPGKKPTATATA 478
Query: 208 ------------------LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDT 249
+ +SG ++D+++ + LD + LRCG PTAP+T
Sbjct: 479 TAERTATTTTTTTAEGGTIFFISSGSNLNDVSRETRYRTRLDAMSMLLRCGCACPTAPNT 538
Query: 250 LACYPFYDNDPMIIESCPDVYFTGNQSKFETKTI-----------------EIEKDKNVR 292
L YPF DP + S P + +Q + +T+ + +E VR
Sbjct: 539 LFSYPFKILDPFVFPSAPHCFVCCDQPEMQTRWVPLEGFNPAGDDNTNEEAPVEDSAGVR 598
Query: 293 LISVPDFFSSRTVAILNLSTLECHSLVV 320
LI VP F + + ++++++ ++VV
Sbjct: 599 LICVPPFSQTGALVLVDVNSPRLDTVVV 626
>gi|407846691|gb|EKG02704.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi]
Length = 619
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 42/206 (20%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFE-MEGK-------- 207
+IEVD+MPG+ D N PQQPLHP L PEA++ S+ VTNPY F GK
Sbjct: 404 TIEVDVMPGDQDVTNAFQPQQPLHPLLLPEAARRSSLKLVTNPYEFHAFPGKKPTATATA 463
Query: 208 ----------------LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLA 251
+ +SG ++D+++ + LD + LRCG PTAP+TL
Sbjct: 464 ERTATTTTTTTAEGGTIFFISSGSNLNDVSRETRYRTRLDAMSMLLRCGCACPTAPNTLF 523
Query: 252 CYPFYDNDPMIIESCPDVYFTGNQSKFETKTI-----------------EIEKDKNVRLI 294
YPF DP + + P + +Q + +T+ + +E VRLI
Sbjct: 524 SYPFKILDPFVFPNAPHCFVCCDQPEMQTRWVPLEGFNPAGDDTTNEEAPVEDSAGVRLI 583
Query: 295 SVPDFFSSRTVAILNLSTLECHSLVV 320
VP F + + ++++++ + ++VV
Sbjct: 584 CVPPFSQTGALVLVDVNSPQLDTVVV 609
>gi|84995054|ref|XP_952249.1| DNA polymerase delta small subunit [Theileria annulata strain
Ankara]
gi|65302410|emb|CAI74517.1| DNA polymerase delta small subunit, putative [Theileria annulata]
Length = 437
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 156 SSIEVDLMPGE----FDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLL-- 209
SS+ VDLMPG DP N+ LPQQ ++P L + +Y TF TNPY F ++G ++
Sbjct: 251 SSVNVDLMPGTTDRPMDPTNSNLPQQVINPILMENSKRYGTFRSTTNPYFFSIDGLVIWK 310
Query: 210 --------------MGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPF 255
+G SGQ V D+ KFS LS LD L+ R +APT D+L +
Sbjct: 311 GVSSTQFIIDQVRFLGVSGQTVEDMCKFSRLSE-LDALKLIARSRCIAPTGTDSLPIHSE 369
Query: 256 YDNDPMIIES-CPDVYFTGNQSKFETKTIEIEKDKNV-RLISVPDFFSSRTVAILNLSTL 313
D + +S P V+FTGN ++E + +L+ VP F T+ +++L TL
Sbjct: 370 MDVFNLTEDSEYPHVFFTGNCKEYEVGDFGTSGTTKLPKLVCVPSFRREPTLVLISLRTL 429
Query: 314 ECHSL 318
E +L
Sbjct: 430 EVTAL 434
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-I 104
+CV+IGT+FK + P+ L E ++ + Q + D D L LED QR+ L GN +
Sbjct: 77 KCVVIGTIFKQMKNHPSPLDEYIQKFD-IKVEQRLEYTDDDDYLFLEDHTQRLVLVGNCL 135
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSD 131
+ H V+G+V+A++G KF D
Sbjct: 136 NPHKFVSGLVIAVRGYMNDENKFVTED 162
>gi|308491108|ref|XP_003107745.1| hypothetical protein CRE_12625 [Caenorhabditis remanei]
gi|308249692|gb|EFO93644.1| hypothetical protein CRE_12625 [Caenorhabditis remanei]
Length = 452
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHP-CLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
VD+ PG DP ++ P P+H CL A + VTNPY FE+ G +M SG+ V+
Sbjct: 286 VDVTPGVGDPCSSMWPLPPIHRVCLQRCAMSQKKVNLVTNPYEFEVNGLRVMTMSGENVT 345
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
++ + S+ D+L ++ HVAP PDTL +P + DP+++E+ P + GNQ +
Sbjct: 346 ELLRTSHKWTGADVLANLVKWQHVAPNCPDTLDAFPMAERDPLVMETTPHIIVCGNQPQA 405
Query: 279 ETKTIEIE-KDKNVRLISVPDFFSSRTVAILNLSTL 313
E + + I+ D ++ +P F +R LNL L
Sbjct: 406 EFRRVPIDGSDSTCLVVCLPKFSKTRVACFLNLKDL 441
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 24 EIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ----- 78
+I KGK + LSD + EE +IG + K +P+ILK + E K+
Sbjct: 55 DIGKGK-FKHISLSDAKQD--EEIFVIGVIVKRIAARPSILKSLLNEDKVAYDDYEGDEE 111
Query: 79 ---HTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ S D + LE E Q + L G I + TG V + G G F V+ + +
Sbjct: 112 DDVKRYAGSSEDRIELESEKQTVRLDGAITMDECATGCCVGVLGKLGKEGVFHVNRLIW 170
>gi|219122961|ref|XP_002181804.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407080|gb|EEC47018.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 470
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEAS-KYSTFHPVT-NPYIFEMEGKLLMGTS 213
S + +D++PGE DP PQ+ LH L P + +Y T T NPY + + +GT
Sbjct: 274 SGVPIDVLPGEHDPTTANWPQRSLHRALLPHTTTRYGTLVARTPNPYAARHDHVVCLGTD 333
Query: 214 GQPVSDIAKFSNLSNPLD---------------ILEYTLRCGHVAPTAPDTLACYPFYDN 258
G+ V D+ + + P+D LE TL GHV PT PD++ P
Sbjct: 334 GRNVRDLC--TRVGVPVDDHDSPGAWRPVTELQALERTLAWGHVCPTGPDSVPTVPHALQ 391
Query: 259 DPMIIE-SCPDVYFTGNQSKFETKTI---------EIEKDKNV---RLISVPDFFSSRTV 305
DPM+IE P +YF GN KF T+ + ++ D V RL+ VP F +
Sbjct: 392 DPMVIEPHLPHLYFAGNAKKFATQRVVAAHADTATAVDTDDRVAFTRLVCVPQFSETGQA 451
Query: 306 AILNLSTLECHSLVVED 322
++NL TL+ + +D
Sbjct: 452 VLVNLQTLDVEVVRFQD 468
>gi|336274849|ref|XP_003352178.1| hypothetical protein SMAC_02613 [Sordaria macrospora k-hell]
gi|380092257|emb|CCC10033.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 492
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 20/131 (15%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--------------------STFHPV 196
++ V L+PG DPAN + PQQP+HP +FP++ Y F V
Sbjct: 337 TMPVTLLPGALDPANASYPQQPIHPAMFPQSRTYMSPPKVGVGKDGDVPEAEEPGWFDNV 396
Query: 197 TNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFY 256
TNP+ E+EG ++GT GQ + D+ K+ + L ++E R VAPTAPDTL YPF
Sbjct: 397 TNPWEGEIEGWRVLGTGGQNLDDVFKYVESEDRLGMMEAMCRWRCVAPTAPDTLWSYPFQ 456
Query: 257 DNDPMIIESCP 267
+++P + + P
Sbjct: 457 EDEPFVTKIVP 467
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
+E + EK K V + L+ E C + GT++ LKP+IL+++S++ +
Sbjct: 73 WEGTVLGGEKVKRVERV----LDVRQGELCWVAGTVYMDMPLKPSILEDVSKDRWISAPT 128
Query: 78 QHTHFVSDS--DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
H+ S + D ++LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +
Sbjct: 129 SIGHYYSGNGDDSIMLEDDSGRIRLVGNALQDHFMVTGCIVAVMGTENTNGEFEVIDLLF 188
Query: 135 AT-PVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
A P R +LS + + S +V++M F
Sbjct: 189 AELPPQPERWSLSKGKKE----ESEDVEMMDASF 218
>gi|17539782|ref|NP_502177.1| Protein F12F6.7 [Caenorhabditis elegans]
gi|13431470|sp|Q19366.1|DPOD2_CAEEL RecName: Full=Probable DNA polymerase delta small subunit
gi|3875793|emb|CAA97785.1| Protein F12F6.7 [Caenorhabditis elegans]
Length = 451
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEASKY-STFHPVTNPYIFEMEGKLLMGTSGQPVS 218
VD+ PG DP ++ P P+H P + VTNPY FE+ G +M SG+ VS
Sbjct: 287 VDVTPGVGDPCSSMWPLPPIHRVCLPRCGMSDKKVNLVTNPYEFEVNGLRVMTMSGENVS 346
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
++ + S D +E ++ HVAP PDTL +P + DP+I++ P V GNQ
Sbjct: 347 ELLRTSLKWTGADAIENIIKWQHVAPNCPDTLDAFPVAERDPLIMDITPHVIICGNQPHA 406
Query: 279 ETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTL 313
E + I I+ N ++ +P F +R LNLS L
Sbjct: 407 EFRHIPID-GSNCLVVCLPKFSKTRVACFLNLSDL 440
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 18 FETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
E EI KGK +LSD + EE ++G + K +P+ILK + E K+
Sbjct: 49 LENAEREIGKGKFTHS-QLSDAKQD--EEIFVVGVIVKRIAARPSILKSLLNEDKVAYDD 105
Query: 78 Q---------HTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFK 128
+ S D + LE + Q + L GNI + TG V + G G F
Sbjct: 106 YEEDAEEDEVKRYAGSIEDRIELESDKQTVRLEGNISMDECATGCCVGVLGKLGKEGVFH 165
Query: 129 VSDVCY 134
V+ + +
Sbjct: 166 VNRLVW 171
>gi|268536488|ref|XP_002633379.1| Hypothetical protein CBG06130 [Caenorhabditis briggsae]
Length = 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPEAS-KYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
+D+ P DP ++ P P+H P + VTNPY FE++G +M SG+ V+
Sbjct: 284 IDVTPAVGDPCSSMWPLPPIHRVCLPRCGMNEKKVNLVTNPYEFEVDGLRIMTMSGENVT 343
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
++ + S+ + D+L ++ H+AP PDTL +P + DP+++ S P V GNQ +
Sbjct: 344 ELLRTSHKWSGADVLSNLVKWQHIAPNCPDTLDAFPIAERDPLVMSSTPHVIICGNQPQA 403
Query: 279 ETKTIEIEK-DKNVRLISVPDFFSSRTVAILNLSTL 313
E + ++ D + L+ +P F +R L+LS L
Sbjct: 404 EVRRFSVDGTDASCLLVCLPKFSKTRVACFLDLSDL 439
>gi|449691738|ref|XP_004212780.1| PREDICTED: DNA polymerase delta subunit 2-like, partial [Hydra
magnipapillata]
Length = 215
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Query: 11 FTGNQSKFETKTIEIEK---GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEI 67
+T S + I++ K GK + +++LSD+ E E+CV++G LF+ +L+P+ILKEI
Sbjct: 36 YTVRLSAMRQRIIDVAKKKWGKDIKIMELSDIKEG--EDCVVVGILFRKMELQPSILKEI 93
Query: 68 SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKF 127
++E ++P P H + S D L LE + QRI L G+I++ + +TG VVA++G +GKF
Sbjct: 94 AQEEGVIPLPPHEKYTSTDDILYLEAQQQRIVLIGDIEVSSSITGSVVAVRGHEDSSGKF 153
Query: 128 KVSDVCYATPVFNP 141
V + Y + P
Sbjct: 154 VVVNFSYCGLPYLP 167
>gi|393216600|gb|EJD02090.1| hypothetical protein FOMMEDRAFT_109238 [Fomitiporia mediterranea
MF3/22]
Length = 519
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 22/181 (12%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF----------EME 205
S + V L+ G DP+ T LPQQ L +F E + F TNP +
Sbjct: 317 SVMPVHLLAGARDPSGTLLPQQALPRAMFGEVKTFENFSCETNPAWLGFNADPSSGKDAR 376
Query: 206 GKLLMGTSGQPVSDIAKF--SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
+ ++ SGQ V D+ K+ S + LD+ TL+ H+APTAPDTL CYP+ DP ++
Sbjct: 377 QRAVLVHSGQSVEDMYKYVPSPPTTRLDLACATLQWRHIAPTAPDTLWCYPYQTTDPFVL 436
Query: 264 ESCPDVYFTGNQSKFETKTIEI----------EKDKNVRLISVPDFFSSRTVAILNLSTL 313
+ PD+Y Q +F T+ + + ++ R++ VP+F + + ++N+ +L
Sbjct: 437 KRTPDLYVVSCQPEFGTRLVSSNDFGETATSEDGERKCRVVLVPNFNETGCLVLVNMRSL 496
Query: 314 E 314
E
Sbjct: 497 E 497
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 23/139 (16%)
Query: 19 ETKTIEIEKGKSVSV-LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 77
E K E KG S S L L+ ++ C IIGT++ + KPN+L+++ + + +P+P
Sbjct: 57 EKKAKERWKGLSGSPPLVPRVLDVAKSQVCFIIGTVYLNMPQKPNVLEDVGRD-RYLPEP 115
Query: 78 Q-HTHFVSDSDELILEDELQRIPLHG---------------NIDIHNQ-----VTGVVVA 116
++S DE++LED+ R+ L G N D N V+GV++A
Sbjct: 116 APREKYLSPEDEIVLEDDSGRVQLVGEALQRVIDYSSSEEANGDKPNGWGNVLVSGVIMA 175
Query: 117 IKGTPVGNGKFKVSDVCYA 135
G +G F+V DVC+A
Sbjct: 176 ALGRETSSGAFEVKDVCFA 194
>gi|401423419|ref|XP_003876196.1| putative DNA polymerase delta subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492437|emb|CBZ27711.1| putative DNA polymerase delta subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 592
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME----------- 205
++EV+LMPG D +N PQQPLHP L P+A K+ST V+NP+ F +
Sbjct: 356 TVEVELMPGANDMSNAFQPQQPLHPLLLPKAGKHSTLRLVSNPFCFTAQPPAAVTAEVEV 415
Query: 206 -------------------GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTA 246
G TSGQ ++D+A+ S LD + + G PTA
Sbjct: 416 RSEECVESEAKKHKAEVADGVNFFVTSGQNINDVARESRFPTRLDTMCMVVVSGCACPTA 475
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETK--TIEIEKDKNVRLISVPDFFSSRT 304
P+TL YPF + DP + P +Q +FET+ T+E ++ R + P S R+
Sbjct: 476 PNTLFSYPFCNQDPFLFHHTPHCVVACDQPQFETRYATLEELHEETHRSFTAPASLSVRS 535
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 73 LVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 129
L +H + +DEL+LED R+ L G +D TG+V+ + GT + NG KV
Sbjct: 161 LAATDEHYSVCNSADELMLEDSSGRVLLQG-LDAERFCTGIVLGVYGTLLPNGCIKV 216
>gi|341881730|gb|EGT37665.1| hypothetical protein CAEBREN_08130 [Caenorhabditis brenneri]
Length = 452
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHPCLFPE-ASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
VD+ PG DP ++ P P+H P A + VTNPY F + ++ SG+ V+
Sbjct: 286 VDVTPGVGDPCSSMWPLPPIHRVCLPRCAMSQKKVNLVTNPYEFAVNEIRVITMSGENVT 345
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
++ + S + D+L ++ H+AP PDTL +P D DP+++E+ P + GNQ
Sbjct: 346 ELLRTSPKWSGADVLANLVKWQHLAPNCPDTLDGFPMSDRDPLVMETTPHIIICGNQPHA 405
Query: 279 ETKTIEIEK-DKNVRLISVPDFFSSRTVAILNLSTL 313
E + + IE D ++ +P F +R LNL+ L
Sbjct: 406 EFRRVSIEGTDATCLVVCLPKFSKTRVACFLNLADL 441
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 25 IEKGKSVSVLKLSDLNETDT-EECVIIGTLFKHQQLKPNILKEISEELKLV--------P 75
I KGK K + L+E EE ++G + K + +P+ILK + E K+
Sbjct: 56 IGKGK----YKFTQLSEAKQDEEVFVVGVIVKRIEARPSILKTLLNEDKVTYDDYEEDDG 111
Query: 76 QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
Q + S D + LE + Q + L G I + + TG V + G G F VS + +
Sbjct: 112 QAVKRYAGSSEDRIDLESDKQTVRLEGAISMDDCATGCCVGVLGKLGKEGTFHVSKLVWP 171
Query: 136 TPVFNPRTT 144
P+ +
Sbjct: 172 AAKCAPKMS 180
>gi|308446195|ref|XP_003087117.1| hypothetical protein CRE_30357 [Caenorhabditis remanei]
gi|308261965|gb|EFP05918.1| hypothetical protein CRE_30357 [Caenorhabditis remanei]
Length = 440
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 160 VDLMPGEFDPANTTLPQQPLHP-CLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS 218
VD+ PG DP ++ P P+H CL A + VTNPY FE+ G +M SG+ V+
Sbjct: 286 VDVTPGVGDPCSSMWPLPPIHRVCLQRCAMSQKKVNLVTNPYEFEVNGLRVMTMSGENVT 345
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKF 278
++ + S+ D+L ++ HVAP PDTL +P + DP+++E+ P + GNQ +
Sbjct: 346 ELLRTSHKWTGADVLANLVKWQHVAPNCPDTLDAFPMAERDPLVMETTPHIIVCGNQPQA 405
Query: 279 ETKTIEIE-KDKNVRLISVPDFFSSRTVAILNL 310
E + + I+ D ++ +P F + +L L
Sbjct: 406 EFRRVPIDGSDSTCLVVCLPKFSMNPCCMLLKL 438
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 24 EIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ----- 78
+I KGK + LSD + EE +IG + K +P+ILK + E K+
Sbjct: 55 DIGKGK-FKHISLSDAKQD--EEIFVIGVIVKRIAARPSILKSLLNEDKVAYDDYEGDEE 111
Query: 79 ---HTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ S D + LE E Q + L G I + TG V + G G F V+ + +
Sbjct: 112 DDVKRYAGSSEDRIELESEKQTVRLDGAISMDECATGCCVGVLGKLGKEGVFHVNRLIW 170
>gi|146088898|ref|XP_001466176.1| putative DNA polymerase delta subunit 2 [Leishmania infantum JPCM5]
gi|134070278|emb|CAM68615.1| putative DNA polymerase delta subunit 2 [Leishmania infantum JPCM5]
Length = 591
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 32/188 (17%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF----------EME- 205
++EV+LMPG D ++ PQQPLHP L P+A K+ST V+NP+ F E+E
Sbjct: 355 TVEVELMPGANDMSDAFQPQQPLHPLLLPKAGKHSTLRLVSNPFCFTAQPPAAATAELEV 414
Query: 206 -------------------GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTA 246
G TSGQ ++D+A+ S LD + + G PTA
Sbjct: 415 RSEERVGSEAKKHKVEVADGVNFFVTSGQNINDVARESRFPTRLDTMCMVVVSGCACPTA 474
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETK--TIEIEKDKNVRLISVPDFFSSRT 304
P+TL YPF ++DP + + P +Q +FET+ T+E ++ R + P S R+
Sbjct: 475 PNTLFSYPFCNHDPFLFQHTPHCVVACDQPQFETRYATLEELHEETHRSFTGPASLSVRS 534
Query: 305 VAILNLST 312
L+ ++
Sbjct: 535 KEKLSAAS 542
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 73 LVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 129
L +H + +DEL+LED R+ L G +D TGVV+ + GT + NG KV
Sbjct: 160 LAAADEHYSVCNSADELMLEDSSGRVLLQG-LDAERFCTGVVLGVYGTLLPNGSIKV 215
>gi|157870692|ref|XP_001683896.1| putative DNA polymerase delta subunit 2 [Leishmania major strain
Friedlin]
gi|68126963|emb|CAJ05268.1| putative DNA polymerase delta subunit 2 [Leishmania major strain
Friedlin]
Length = 592
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 30/161 (18%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME----------- 205
++EV+LMPG D ++ PQQPLHP L P+A K+ST V+NP+ F +
Sbjct: 356 TVEVELMPGANDMSDAFQPQQPLHPLLLPKAGKHSTLRLVSNPFCFTAQPPAAASAESEV 415
Query: 206 -------------------GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTA 246
G TSGQ ++D+A+ S LD + + G PTA
Sbjct: 416 RGEERVESEAKKHKVEVADGVNFFVTSGQNINDVARESRFPTRLDTMCMVVVSGCACPTA 475
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK 287
P+TL YPF ++DP + + P +Q +FET+ +E+
Sbjct: 476 PNTLFSYPFCNHDPFLFQHTPHCVVACDQPQFETRYATLEE 516
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 73 LVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 129
L +H + + +DEL+LED R+ L G +D TGVV+ + GT + NG KV
Sbjct: 161 LAAADEHYNVCNSADELMLEDSSGRVLLQG-LDAERFCTGVVLGVYGTLLSNGSIKV 216
>gi|398016574|ref|XP_003861475.1| DNA polymerase delta subunit 2, putative [Leishmania donovani]
gi|322499701|emb|CBZ34775.1| DNA polymerase delta subunit 2, putative [Leishmania donovani]
Length = 590
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 30/161 (18%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF----------EME- 205
++EV+LMPG D ++ PQQPLHP L P+A K+ST V+NP+ F E+E
Sbjct: 355 TVEVELMPGANDMSDAFQPQQPLHPLLLPKAGKHSTLRLVSNPFCFTAQPPAAATAELEV 414
Query: 206 -------------------GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTA 246
G TSGQ ++D+A+ S LD + + G PTA
Sbjct: 415 RSEERVGSEAKKHKVEVADGVNFFVTSGQNINDVARESRFPTRLDTMCMVVVSGCACPTA 474
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK 287
P+TL YPF ++DP + + P +Q +FET+ +E+
Sbjct: 475 PNTLFSYPFCNHDPFLFQHTPHCVVACDQPQFETRYATLEE 515
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 73 LVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 129
L +H + +DEL+LED R+ L G +D TGVV+ + GT + NG KV
Sbjct: 160 LAAADEHYSVCNSADELMLEDSSGRVLLQG-LDAERFCTGVVLGVYGTLLPNGSIKV 215
>gi|154338970|ref|XP_001565707.1| DNA polymerase delta subunit 2, putative [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062759|emb|CAM39205.1| DNA polymerase delta subunit 2, putative [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------------ 204
++EV+LMPG D ++ PQQPLHP L P+A K+ST V+NP+ F
Sbjct: 317 TVEVELMPGANDMSDAFQPQQPLHPLLLPKAGKHSTLRLVSNPFCFTAQPGAATVATTEL 376
Query: 205 -------------------EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPT 245
EG TSGQ ++D+A+ S LD + + G PT
Sbjct: 377 LKSEECVESEAKKHKTEVAEGVNFFVTSGQNINDVARESRFPTRLDTMCMVVVSGCACPT 436
Query: 246 APDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEK 287
AP+TL YPF ++DP + ++ P +Q +FET+ +++
Sbjct: 437 APNTLFSYPFCNHDPFLFQNTPHCVVACDQPQFETRYATLDE 478
>gi|389583517|dbj|GAB66252.1| DNA polymerase delta small subunit [Plasmodium cynomolgi strain B]
Length = 461
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++ VDLMPGE DP++ LPQQP F A Y++F VTNPY+F ++ + SG+P
Sbjct: 301 AVYVDLMPGEKDPSDAILPQQPFPNLFFKTARNYNSFQCVTNPYLFSIDNVNICCMSGEP 360
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE---SCPDVYFTG 273
V++I +S + P+D L+ + TL CYPF + DP ++ P ++ G
Sbjct: 361 VNNIVSYSK-NCPMDALKMIAK--------SHTLGCYPFIEKDPFCLQDDDKYPHIFVNG 411
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLE 314
N ++ E + + EK + L+ +P F + ++N+ ++
Sbjct: 412 NCAQLEVQHLHGEKTLPL-LVCLPSFDITPKALLVNIRNMQ 451
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 13 GNQSKFETKTIEIEKGKSVSVLKLSDLNETDTEE-CVIIGTLFKHQQLKPNILKEISEEL 71
G +K K GK +L L E T E C IGTLFK +L+P+IL E E+
Sbjct: 92 GGDAKDHVKGHAGGGGKEYPLLHY--LKEIKTNENCYCIGTLFKKMELRPSILNEYISEI 149
Query: 72 KLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSD 131
+ ++ D D L LEDE R+ L GNI+ + VTG+ V +KGT + NG V +
Sbjct: 150 N-EAEDVVVNYSHDEDVLFLEDETARLKLEGNINSDHYVTGLTVIVKGTGMSNGSLYVDE 208
Query: 132 VCYA 135
+ YA
Sbjct: 209 LIYA 212
>gi|72386565|ref|XP_843707.1| DNA polymerase delta subunit 2 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175746|gb|AAX69874.1| DNA polymerase delta subunit 2, putative [Trypanosoma brucei]
gi|70800239|gb|AAZ10148.1| DNA polymerase delta subunit 2, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 566
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 47/203 (23%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------------ 204
SIEV+LMPG+ D N PQQP+HP L PEA++ S+ VTNPY F
Sbjct: 346 SIEVELMPGDNDMTNAFHPQQPIHPLLLPEAARRSSIGFVTNPYEFVAFPSDDEENHVER 405
Query: 205 -------EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
G + +SG ++ + + + + LD + L+ G PTAP+T+ YPF D
Sbjct: 406 SGADATEGGTIFFVSSGSNLNCVNRETRFDSRLDAMSLILQSGCACPTAPNTVFSYPFTD 465
Query: 258 NDPMIIESCPDVYFTGNQSKFETK---------------------------TIEIEKD-K 289
DP + P + +Q ++ET+ + EIE D
Sbjct: 466 TDPFVFPKAPHCFVCCDQPEWETRWEPLATFDPTRDTNGCGILLNEEMEGQSQEIESDGA 525
Query: 290 NVRLISVPDFFSSRTVAILNLST 312
VRL+ VP F + + ++++++
Sbjct: 526 GVRLVCVPTFAQTGKLVLVDVNS 548
>gi|261326774|emb|CBH09747.1| DNA polymerase delta subunit 2, putative [Trypanosoma brucei
gambiense DAL972]
Length = 566
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 47/203 (23%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEM------------ 204
SIEV+LMPG+ D N PQQP+HP L PEA++ S+ VTNPY F
Sbjct: 346 SIEVELMPGDNDMTNAFHPQQPIHPLLLPEAARRSSIGFVTNPYEFVAFPSDDEENHVER 405
Query: 205 -------EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
G + +SG ++ + + + + LD + L+ G PTAP+T+ YPF D
Sbjct: 406 SGADATEGGTIFFVSSGSNLNCVNRETRFDSRLDAMSLILQSGCACPTAPNTVFSYPFTD 465
Query: 258 NDPMIIESCPDVYFTGNQSKFETK---------------------------TIEIEKD-K 289
DP + P + +Q ++ET+ + EIE D
Sbjct: 466 TDPFVFPKAPHCFVCCDQPEWETRWEPLATFDPTRDTNGCGILLNEEMEGQSQEIESDGA 525
Query: 290 NVRLISVPDFFSSRTVAILNLST 312
VRL+ VP F + + ++++++
Sbjct: 526 GVRLVCVPTFAQTGKLVLVDVNS 548
>gi|342180146|emb|CCC89622.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 561
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 45/201 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF-------------- 202
S+EV+LMPG+ D N PQQP+HP L E+++ S+ VTNPY F
Sbjct: 347 SVEVELMPGDNDMTNAFHPQQPMHPLLLSESARCSSMRLVTNPYEFVALSSDESGVDASD 406
Query: 203 ----EMEGK-LLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYD 257
+G+ L +SG + +++ +N+++ LD + + LR G PTAP+TL YPF D
Sbjct: 407 GTNTTSKGETLFFVSSGSNIHCVSRETNINSRLDAMSFVLRSGCACPTAPNTLFSYPFKD 466
Query: 258 NDPMIIESCPDVYFTGNQSKFETK--------------TIEI------------EKDKNV 291
DP + P + +Q +++T+ T EI E V
Sbjct: 467 VDPFVFPQAPHCFVCCDQPEWQTRWEPLESFSPTYDANTNEIHVNEEGGETGKDETAAGV 526
Query: 292 RLISVPDFFSSRTVAILNLST 312
RL+ VP F + + ++++++
Sbjct: 527 RLVCVPPFVQTGILVLVDVNS 547
>gi|408397529|gb|EKJ76671.1| hypothetical protein FPSE_03221 [Fusarium pseudograminearum CS3096]
Length = 436
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST-----------FHPVTNPYIFEME 205
SI V ++PG DPAN + PQQP+HP +FP A Y+ F VTNP+ E+E
Sbjct: 326 SIPVTMLPGARDPANASYPQQPVHPAMFPAARAYTRDPAAPVDQPGWFDTVTNPWEAELE 385
Query: 206 GKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTL 250
G ++GT GQ V D+ K+ + L ++E R APTAPDTL
Sbjct: 386 GWRVLGTGGQNVDDVFKYVGSDDRLGMMEAMCRWRCCAPTAPDTL 430
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDELQR 97
L+ E C + GT++ LKPNIL+++S++ + + P T + SD D+++LEDE R
Sbjct: 88 LDVRQGELCYVTGTVYMEMPLKPNILEDVSKD-RWISAPISTPKYFSDDDQIMLEDESGR 146
Query: 98 IPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP---RTTLSN 147
I L G+I Q VTG +V + GT NG+F++ D+ + P P R +LSN
Sbjct: 147 IRLVGDILKTVQLVTGCIVGVMGTENSNGEFEIIDIKF--PDLPPQPERWSLSN 198
>gi|322711483|gb|EFZ03056.1| DNA polymerase delta small subunit [Metarhizium anisopliae ARSEF
23]
Length = 438
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS----------TFHPVTNPYIFEMEG 206
SI + L+PG DPAN + PQQP+H +FP A Y F VTNP+ E+EG
Sbjct: 333 SIPITLLPGAQDPANASYPQQPIHMAMFPRARAYGPEPTKPKEPGWFDAVTNPWEGELEG 392
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTL 250
++GT GQ V D+ K+ + + L ++E R APTAPDTL
Sbjct: 393 WRVLGTGGQNVDDVFKYVDSDDRLGMMEAMCRWRCCAPTAPDTL 436
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQP-QHTHFVSD-SDELILEDEL 95
L+ E C + GT++ LKPNIL+++S++ + P P Q T+F D SD+++LED+
Sbjct: 88 LDVRQGELCWVAGTVYMEMSLKPNILEDVSKDRWISAPIPTQQTYFSPDGSDQIMLEDDS 147
Query: 96 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
RI L G+ + VTG ++A+ GT +G+F+V D +
Sbjct: 148 GRIRLVGDLLQSVPLVTGCIIAVMGTENSSGEFEVIDTKF 187
>gi|322694605|gb|EFY86430.1| DNA polymerase delta subunit 2, putative [Metarhizium acridum CQMa
102]
Length = 485
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYS----------TFHPVTNPYIFEMEG 206
SI + L+PG DPAN + PQQP+H +FP A Y F VTNP+ E+EG
Sbjct: 380 SIPITLLPGAQDPANASYPQQPIHMAMFPRARAYGPEPTKPKEPGWFDAVTNPWEGELEG 439
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTL 250
++GT GQ V D+ K+ + + L ++E R APTAPDTL
Sbjct: 440 WRVLGTGGQNVDDVFKYVDSDDRLGMMEAMCRWRCCAPTAPDTL 483
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQP-QHTHFVSD-SDELILEDEL 95
L+ E C + GT++ LKPNIL+++S++ + P P Q T+F D SD+++LED+
Sbjct: 135 LDVRQGELCWVAGTVYMEMPLKPNILEDVSKDRWISAPIPTQQTYFSHDGSDQIMLEDDS 194
Query: 96 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
RI L G+ + VTG ++A+ GT +G+F+V D Y
Sbjct: 195 GRIRLVGDLVQSVPLVTGCIIAVMGTENSSGEFEVIDTKY 234
>gi|300122138|emb|CBK22712.2| unnamed protein product [Blastocystis hominis]
Length = 184
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+ + L+PG D ++ +PQQPLHP L P ++++S+ TNP+ ++ + ++GT+GQ +
Sbjct: 47 VSISLIPGPTDAVSSLVPQQPLHPSLLPRSARFSSLERATNPFHALIQNRDVLGTAGQNI 106
Query: 218 SDIAKFSNLSNP---LDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDV 269
DI + ++ P LD++ TL+ G + PT P+T +P +DP I+ + PDV
Sbjct: 107 QDILR--QIAPPLSVLDVMALTLQWGVLFPTTPNTCPGFPLTTHDPFIVRTVPDV 159
>gi|440297741|gb|ELP90382.1| DNA polymerase delta small subunit, putative [Entamoeba invadens
IP1]
Length = 398
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 137/347 (39%), Gaps = 79/347 (22%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVP----QPQHTHFVSDSDELILEDELQRIPLH 101
E +IGT+FK + P +L + ++ K + QP F +D D LED + L
Sbjct: 60 ETSLIGTIFKKSKKLPTVLAQHKKDPKHIKIDFTQPP---FHADDDSAYLEDLIGHTDLV 116
Query: 102 GNIDIHNQVT-GVVVAIKGTPVGNGKFKVSDVCY------ATPVFNPRTTLSNNENKYVN 154
++ N +T G V+A+ GT G F V+DV + T V N T + +
Sbjct: 117 MKPEVLNTITSGTVIAVIGTINTEGFFNVTDVIFPYEEPIETTVMNCDATKNITVISDIR 176
Query: 155 HSSIEVDLM--------------------------------------------------- 163
S+ + DLM
Sbjct: 177 FSACKTDLMLYDVLKNKKIELGTDVFVIGNHYLESMGSPLVDEYDGFLSEVSKGIPVTVI 236
Query: 164 PGEFDPANTTLPQQPLHPCLFPEASKYST-----FHPVTNPYIFEMEGKLLMGTSGQPVS 218
P DP N LP QP H +F ++ K +T F+ V+NP I + +M S +
Sbjct: 237 PEGDDPTNAVLPFQPFHRAMFVKSMKNNTETQKSFNLVSNPSIVTLGDITIMFLSQEVFV 296
Query: 219 DIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII-ESCPDVYFTGNQSK 277
+ L P D+ + L+ GH+ P AP CYP Y+ DP ++ E PD + G
Sbjct: 297 RAMDLTILKTPQDVFCFFLKAGHLCPFAPSMFPCYP-YEKDPFVLNEPFPDFFIVGG--- 352
Query: 278 FETKTIEIE-KDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVEDL 323
FE + K + L++VP F+ + +LN + H VV DL
Sbjct: 353 FEEMCYSVNFMGKTICLVTVPSFYKEKKFVVLN---TDSHENVVVDL 396
>gi|183230790|ref|XP_001913482.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802748|gb|EDS89734.1| hypothetical protein EHI_141410 [Entamoeba histolytica HM-1:IMSS]
gi|449704541|gb|EMD44767.1| DNA polymerase delta small subunit, putative [Entamoeba histolytica
KU27]
Length = 395
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 125/327 (38%), Gaps = 75/327 (22%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTH--FVSDSDELILEDELQRIPLHGNID- 105
+IGTLFK + P +L + + +K V +V DSD LED + L + D
Sbjct: 68 LIGTLFKKSKKIPTLLNQY-KSIKSVDSISFDEDSYVDDSDTCYLEDITSHVNLIIDKDQ 126
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV------NHSSIE 159
+ + V+G +A+ G + F++ + Y P + + Y+ +SS +
Sbjct: 127 LAHIVSGTALAVIGELSNDSSFEIKSILYPYDKPKPTKLIEDETRCYIALVNDIQYSSEK 186
Query: 160 VDLM-------------------------------------------------PGEFDPA 170
DL+ P DP
Sbjct: 187 KDLILHNILSNELPFPLIAHAILIGKHVSDPSFIPQYDWFLSSVCNNLNIVTIPSRDDPT 246
Query: 171 NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPL 230
N P QP+HP +F AS ST+H TNP I G + SG + K +
Sbjct: 247 NAVYPYQPIHPSIFAHASSKSTYHSTTNPSIISFNGVRTLILSGDVIQHYMKLTTFKTVN 306
Query: 231 DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES-CPDVYFTG------NQSKFETKTI 283
+++ +CGH+ P AP T C+P +DP I+E PDV G + F KTI
Sbjct: 307 EVILQLFQCGHLCPCAPSTFPCFP-ASSDPFILEEPFPDVIVIGGFPEQCDSFNFMGKTI 365
Query: 284 EIEKDKNVRLISVPDFFSSRTVAILNL 310
I ++VP F +T+ + +
Sbjct: 366 TI--------VTVPSFAKQKTIILFDF 384
>gi|407043539|gb|EKE42004.1| DNA polymerase epsilon subunit B domain containing protein
[Entamoeba nuttalli P19]
Length = 395
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 125/327 (38%), Gaps = 75/327 (22%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTH--FVSDSDELILEDELQRIPLHGNID- 105
+IGTLFK + P +L + + +K V +V DSD LED + L + D
Sbjct: 68 LIGTLFKKSKKIPTLLNQY-KSIKSVDSINFDEDSYVDDSDTCYLEDITSHVNLIIDKDQ 126
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV------NHSSIE 159
+ + V+G +A+ G + F++ + Y P + + Y+ +SS +
Sbjct: 127 LAHIVSGTALAVIGELSNDSSFEIKSILYPYDKPKPTKLIEDETRCYIALVNDIQYSSEK 186
Query: 160 VDLM-------------------------------------------------PGEFDPA 170
DL+ P DP
Sbjct: 187 KDLILHNILSNELPFPLIAHAILIGKHVSDPSFIPQYDWFLSSVCNNLNIVTIPSRDDPT 246
Query: 171 NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPL 230
N P QP+HP +F AS ST+H TNP I G + SG + K +
Sbjct: 247 NAVYPYQPIHPSIFAHASSKSTYHSTTNPSIISFNGVRTLILSGDVIQHYMKLTTFKTVN 306
Query: 231 DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES-CPDVYFTG------NQSKFETKTI 283
+++ +CGH+ P AP T C+P +DP I+E PDV G + F KTI
Sbjct: 307 EVILQLFQCGHLCPCAPSTFPCFP-ASSDPFILEEPFPDVIVIGGFPEQCDSFDFMGKTI 365
Query: 284 EIEKDKNVRLISVPDFFSSRTVAILNL 310
I ++VP F +T+ + +
Sbjct: 366 TI--------VTVPSFAKQKTIILFDF 384
>gi|167393588|ref|XP_001740638.1| DNA polymerase delta small subunit [Entamoeba dispar SAW760]
gi|165895179|gb|EDR22929.1| DNA polymerase delta small subunit, putative [Entamoeba dispar
SAW760]
Length = 395
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 125/327 (38%), Gaps = 75/327 (22%)
Query: 49 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTH--FVSDSDELILEDELQRIPLHGNID- 105
+IGTLFK + P +L + + +K V +V DSD LED + L N D
Sbjct: 68 LIGTLFKKSKKIPTLLNQ-YKSIKSVDSISFNEDSYVDDSDTCYLEDITSHVNLIINKDQ 126
Query: 106 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYV------NHSSIE 159
+ + V+G +A+ G + + F++ + Y P + + + Y+ +SS +
Sbjct: 127 LAHIVSGTALAVIGELINDLSFEIKSILYPYDKPKPTKLIESETHCYIALVNDIQYSSEK 186
Query: 160 VDLM-------------------------------------------------PGEFDPA 170
DL+ P DP
Sbjct: 187 KDLILHNILSNELPFPLIAHAILIGKHVSDPSFIPQYDWFLSSVCNNLNIITIPSRDDPT 246
Query: 171 NTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPL 230
N P QP+HP +F AS ST+H TNP I + SG + K +
Sbjct: 247 NAVYPYQPIHPSIFAHASSKSTYHSTTNPSIISFNDVRTLILSGDIIQHYLKLTTFKTVN 306
Query: 231 DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIES-CPDVYFTG------NQSKFETKTI 283
+++ +CGH+ P AP T C+P DP I+E PDV G + F KTI
Sbjct: 307 EVILQLFQCGHLCPCAPSTFPCFP-ASTDPFILEEPFPDVIVIGGFPEQCDSFDFMGKTI 365
Query: 284 EIEKDKNVRLISVPDFFSSRTVAILNL 310
I ++VP F +T+ + +
Sbjct: 366 TI--------VTVPSFAKQKTLVLFDF 384
>gi|339264829|ref|XP_003366458.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
gi|316963190|gb|EFV48949.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
Length = 323
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 22/157 (14%)
Query: 10 YFTGNQSKFE-TKTIEIEK-----GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNI 63
YF +S+ E + IEK G+S + ++S+L E EECV IGT+ K Q L+PN+
Sbjct: 61 YFYIYRSRLEYGRRALIEKAHKTYGESKPIRRISELVER--EECVTIGTVCKIQDLRPNV 118
Query: 64 LKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPV 122
LKEI++E ++PQP SD+DE++LEDE RI L G+++ +VVA+ G
Sbjct: 119 LKEIADEGHVIPQPIAPLKCTSDTDEVVLEDENLRIKLIGSVE------SIVVAVCGMVT 172
Query: 123 GNGKFKVSDVCY------ATPVFNPRTTLSNNENKYV 153
GKF V D+ + PV +P +T S +++YV
Sbjct: 173 SGGKFHVDDIIFLPVSAPTKPVADPGST-SQVDSRYV 208
>gi|123454576|ref|XP_001315040.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897705|gb|EAY02817.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 388
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
S ++ ++PG+ DP +LPQQP HP L +SK F +NP F +G L + +G+
Sbjct: 233 SKKIVVIPGQNDPCTNSLPQQPYHPVLL--SSK--KFVLASNPSKFTADGLLFLCDAGES 288
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
DI K + + D L+ H+APTAPD L P + D +++E P+V G
Sbjct: 289 PRDIMKTTRYTFS-DAQFSILQWHHIAPTAPDQLPAVPVIEKDVLVMEDTPNVLVCGLAP 347
Query: 277 KFETKTIEIEKDKN-VRLISVPDFFSSRTVAILNLSTLECHSLVV 320
+FE + D N V+LISVP F ++T+ + T E + +
Sbjct: 348 EFE------QNDYNDVKLISVPSFKDTQTIVAYDTKTNEAKPIQI 386
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 39 LNETDTEE-CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 97
LN+ + ++ C IIG L+K+ + NIL E +++ Q SD D L LEDE R
Sbjct: 48 LNQMEPDKPCTIIGVLYKNLSSRQNILDEY-KDIGYESQAPEELTQSDKDTLFLEDESGR 106
Query: 98 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNP 141
+ L G + + VTG+V+ ++G P + F+V+ V Y P +NP
Sbjct: 107 VQLVG-LQNNEFVTGIVIGVQGVPSAS-TFEVTKVIY--PQYNP 146
>gi|402580374|gb|EJW74324.1| hypothetical protein WUBG_14769 [Wuchereria bancrofti]
Length = 136
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 214 GQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
G+ +SD+ +++ N +++L L H+APT PDT+ +PF D DP IIES P + F
Sbjct: 21 GECLSDLKRYTKTLNGVELLSKILDWQHLAPTIPDTVDGFPFIDRDPFIIESFPHILFAA 80
Query: 274 NQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLEC--HSLVVEDL 323
NQ + +E E ++ L+SVP F + ++ ++NL LE H+ V+ L
Sbjct: 81 NQPEASHALVEFEGNRRTLLLSVPSFTKTFSMVLVNLRNLEVIEHNFSVDRL 132
>gi|326472656|gb|EGD96665.1| DNA polymerase subunit delta-2 [Trichophyton tonsurans CBS 112818]
gi|326482101|gb|EGE06111.1| DNA polymerase subunit delta-2 [Trichophyton equinum CBS 127.97]
Length = 530
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 47/190 (24%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY---------------STFHPVTNPYI 201
S+ V LMPGE DPAN +LPQQ +H + P + Y VTNP+
Sbjct: 335 SLPVTLMPGETDPANFSLPQQEIHTAMLPRSKAYCPPIAPKRQALPSEPGWLDNVTNPWE 394
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNL-------------SNPLDILEYTL--RCGHVAPTA 246
++EG GTSGQ V D+ ++ N L ++E+ L RCG PTA
Sbjct: 395 GDIEGWRFWGTSGQNVDDVLRYVNFEELEDDEVEDIENGARLKLMEHLLKWRCG--VPTA 452
Query: 247 PDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVA 306
PDT+ P + + IIE + T I K VRLI++P F + +
Sbjct: 453 PDTIWNQPRFQS--TIIEG----------GDWGTDDDSITK---VRLIALPKFHETGEIV 497
Query: 307 ILNLSTLECH 316
+L+ TL
Sbjct: 498 LLDTETLAVE 507
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 49 IIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILEDELQRIPLHGNI 104
I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++EDE R+ L G++
Sbjct: 98 IVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVEDESGRLVLTGSL 157
Query: 105 DIHN-QVTGVVVAIKGTPVGNGKFKVSDV 132
VTGVVVA+ GT +G+F+V D+
Sbjct: 158 LQSTFLVTGVVVAVLGTENADGQFEVVDI 186
>gi|71030786|ref|XP_765035.1| DNA polymerase delta small subunit [Theileria parva strain Muguga]
gi|68351991|gb|EAN32752.1| DNA polymerase delta small subunit, putative [Theileria parva]
Length = 419
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 33/229 (14%)
Query: 92 EDELQRIPLH--GNIDIHNQVTGVVVAIKGTPVGN---GKFKVSDVCYATPVFNPRTTLS 146
E L I LH N + + ++ +VVA G +G K SD+ YA
Sbjct: 211 ERYLLNIFLHIFSNSEYNKRLVRLVVA--GNGIGRCDTESLKKSDLFYAQLA-------- 260
Query: 147 NNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEG 206
S+I VDLMPG DP N+ LPQQ ++P L + +Y TF TNPY F ++G
Sbjct: 261 ---------STINVDLMPGSLDPTNSNLPQQVINPILMENSRRYGTFRSTTNPYFFSIDG 311
Query: 207 KLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
+ + + A F L + ++ RC + L + ++
Sbjct: 312 -VYQAKQWKISVNSADFQKLVIFIKLI--PCRCTEASCKIHSELDVFNLTEDSEY----- 363
Query: 267 PDVYFTGNQSKFETKTIEIEKDKNV-RLISVPDFFSSRTVAILNLSTLE 314
P V+FTGN +FE + +L+ VP F T+ +++L TLE
Sbjct: 364 PHVFFTGNCKEFEVGDFGTSGSTKLPKLVCVPSFKRDPTLVLISLRTLE 412
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 46 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-I 104
+CV+IGT+FK + P L E ++ + + + + D D L LED QR+ L GN I
Sbjct: 75 KCVVIGTVFKQMKYHPTPLDEYIQKFD-IKVEEKSEYTDDEDYLFLEDHTQRLILVGNCI 133
Query: 105 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSN 147
+ H V+G+V+A++G KF D Y P TL N
Sbjct: 134 NPHKFVSGLVIAVRGYMNDENKFVTED--YTLPEIPDSLTLYN 174
>gi|221488496|gb|EEE26710.1| NBP2B protein, putative [Toxoplasma gondii GT1]
Length = 503
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+S+ VDLMPG+ DP +LPQQPLH L P + Y + V+NP+ F ++ +G++GQ
Sbjct: 426 ASVPVDLMPGDADPTTFSLPQQPLHGALLPISRTYGSIRAVSNPHAFALDQIRFIGSAGQ 485
Query: 216 PVSDIAKFSNLSNPLDIL 233
PVS++ FS+L PL L
Sbjct: 486 PVSNVCAFSDL-RPLGKL 502
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 34/129 (26%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI------ 98
+ECVI+GTLFK LKP++LKE +++++ P F+SDSD L LED+ R+
Sbjct: 173 QECVIVGTLFKDMVLKPSVLKEYLDDIQVQATP--NSFLSDSDALFLEDQTARVRLVVDA 230
Query: 99 -------------------------PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
P + ++ VTG+VVA++G NG+F V D C
Sbjct: 231 ASSSSAEENGETAEETDALADAGEQPEKQKLRVNGVVTGLVVAVRGVATDNGRFLVRDFC 290
Query: 134 Y-ATPVFNP 141
P F P
Sbjct: 291 LGGAPAFPP 299
>gi|322789096|gb|EFZ14530.1| hypothetical protein SINV_13987 [Solenopsis invicta]
Length = 174
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 41 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 100
E+ + ++IG L+K Q+LK ++L+++S+EL+L QP ++ S D+L LEDE R+ L
Sbjct: 13 ESSEKSYILIGVLYKDQKLKSSLLRDLSKELQLEAQPS-SNCASVDDKLFLEDETLRVRL 71
Query: 101 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR 142
GN ID+ VTG+V A+ G + NG F V D C+ P + P+
Sbjct: 72 VGNHIDVQEIVTGLVCAVLGHELENGNFWVEDWCF--PGYYPK 112
>gi|258564392|ref|XP_002582941.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908448|gb|EEP82849.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 410
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 28/122 (22%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYST---------------FHPVTNPYI 201
SI V LMPGE DPAN LPQQ +H +FP + Y + VTNP+
Sbjct: 284 SIPVTLMPGETDPANFALPQQAIHRAMFPRSRNYCSPPRSSLEEVQSEPGWLDTVTNPWQ 343
Query: 202 FEMEGKLLMGTSGQPVSDIAKFSNLSN-------------PLDILEYTLRCGHVAPTAPD 248
++EG L G SGQ V D+ K+ +L + L ++E LR PTAPD
Sbjct: 344 GDVEGWRLWGCSGQNVDDVLKYISLDDDEIETSRDPEGDTRLRLMEAMLRWRCAVPTAPD 403
Query: 249 TL 250
T+
Sbjct: 404 TI 405
>gi|396082121|gb|AFN83733.1| DNA polymerase delta regulatory subunit B [Encephalitozoon romaleae
SJ-2008]
Length = 425
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 137/374 (36%), Gaps = 114/374 (30%)
Query: 41 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 100
E CVIIGTLF LKP I +I+ + K + + + + S + LED R+ +
Sbjct: 50 EPGNRRCVIIGTLFIASDLKPTIFDKINRKSKKIKEMEAKTYYSQEIKYFLEDGSGRVEV 109
Query: 101 HGNIDI-----HNQV--TGVVVAIKGTPVGNGKFKVSDVC----------YATPVFNPRT 143
+DI N V TG+ + + G KF D+ Y + N R
Sbjct: 110 EF-LDISWIYQRNFVISTGMCIGVAGAMTERTKFLAEDILFPFSHPQSFPYISRNLNSRQ 168
Query: 144 TLS-------NNENK----------YVNHSSIEVDLMPGEF------------------- 167
+ +NENK Y+ + ++ +M G F
Sbjct: 169 RVCFISGPSISNENKNRERMMVIIDYLRMTGVKEYIMIGNFFAESKEVSKQMLSLLDSVL 228
Query: 168 --------------DPANTTLPQQPLHPCLF--PEASKYSTFHPVTNPYIFEMEGKLLMG 211
D + LP P+HP LF P + TNP E++G+ ++
Sbjct: 229 KYAGGRINLIPNIRDFGSRVLPLSPVHPKLFTLPVGAN-------TNPCHLEVDGRKVLI 281
Query: 212 TSGQPVSDIAKF--------------------------------SNLSNPLDILEYTLRC 239
T+ V D+ K+ SN N + LE ++
Sbjct: 282 TTRFVVEDLLKYLPQDLENVQGNNFEYKMHLDMEKINEAAPRSMSNEGNIIRALEVLMKA 341
Query: 240 GHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRL-ISVPD 298
GHV PTAPDT+ PF DP ++ D G+ +F +E + + L ++P
Sbjct: 342 GHVCPTAPDTIQSVPFSGKDPFVVTGQVDYLCVGDTDEF----LEGQSENGTTLFFTIPR 397
Query: 299 FFSSRTVAILNLST 312
F V +L++ T
Sbjct: 398 FSERHEVVVLDMET 411
>gi|432118135|gb|ELK38020.1| DNA polymerase delta subunit 2 [Myotis davidii]
Length = 163
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 31 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 90
V + KL +L E C + GTL K +L P+ L+E+S+E L+P P + ++ DEL+
Sbjct: 28 VQIKKLYELQ--PRERCCVEGTLLKAMELWPSNLQEVSKEHSLLPTPPWSKYIHADDELV 85
Query: 91 LEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
LE+ELQ I L ID+ + TG+++ + G+ +GKF V + C+
Sbjct: 86 LEEELQCIKLEVTIDMFSLATGMLLTVLGSMRDDGKFLVEEHCF 129
>gi|237837865|ref|XP_002368230.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
ME49]
gi|211965894|gb|EEB01090.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
ME49]
gi|221509002|gb|EEE34571.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
VEG]
Length = 492
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 34/129 (26%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI------ 98
+ECVI+GTLFK LKP++LKE +++++ P F+SDSD L LED+ R+
Sbjct: 173 QECVIVGTLFKDMVLKPSVLKEYLDDIQVQATP--NSFLSDSDALFLEDQTARVRLVVDA 230
Query: 99 -------------------------PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 133
P + ++ VTG+VVA++G NG+F V D C
Sbjct: 231 ASSSSAEENGENAEETDALADAGEQPEKQKLRVNGVVTGLVVAVRGVATDNGRFLVRDFC 290
Query: 134 Y-ATPVFNP 141
P F P
Sbjct: 291 LGGAPAFPP 299
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEME 205
+S+ VDLMPG+ DP +LPQQPLH L P + Y + V+NP+ F ++
Sbjct: 426 ASVPVDLMPGDADPTTFSLPQQPLHGALLPISRTYGSIRAVSNPHAFALD 475
>gi|238583563|ref|XP_002390281.1| hypothetical protein MPER_10466 [Moniliophthora perniciosa FA553]
gi|215453515|gb|EEB91211.1| hypothetical protein MPER_10466 [Moniliophthora perniciosa FA553]
Length = 253
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 35 KLSDLNET-DTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED 93
+ DL+E ++ C I+GT++ LKPN++++I+ + + P + S D+++LED
Sbjct: 41 RWKDLDEVLKSQLCYIVGTVYMEMPLKPNVMEDIARDRSIPSLPPPSKLWSPEDKVMLED 100
Query: 94 ELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNEN 150
E RI L G+ + VTGV++ G NG+F+V D+CY NP N N
Sbjct: 101 ESGRIRLVGDCVKKAKLVTGVILGALGMETPNGEFEVVDICYPGMAPNPTEESGNKMN 158
>gi|429964639|gb|ELA46637.1| hypothetical protein VCUG_01863 [Vavraia culicis 'floridensis']
Length = 386
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 151 KYVNHSSIEVDLMPGEFDPANTTLPQQPL------HPCLF-PEASKYSTFHPVTNPYIFE 203
+++ + + ++P DP N LPQQP+ + CLF P +++ T
Sbjct: 229 QFIENFGADTFIIPNTNDPTNKLLPQQPISNRLIDYNCLFLPSPAQFET----------- 277
Query: 204 MEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMII 263
G ++ V+DI + S + I++ +R H+ PTAPDT+ C P+ D DP I+
Sbjct: 278 --GTKMLFIPPVAVNDIKLYGETS-AIKIMKMLVRTRHICPTAPDTVGCIPYKDEDPFIL 334
Query: 264 ESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNLSTLECHSLVVE 321
PD FT KFE EI K + +P F ++ V IL L ++ +E
Sbjct: 335 NEMPDYVFTLG-DKFEK---EIGK---ITYFVLPSFSKTKKVIILTLDKCNFETIALE 385
>gi|401828473|ref|XP_003887950.1| DNA polymerase delta subunit B [Encephalitozoon hellem ATCC 50504]
gi|392998958|gb|AFM98969.1| DNA polymerase delta subunit B [Encephalitozoon hellem ATCC 50504]
Length = 424
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 132/372 (35%), Gaps = 109/372 (29%)
Query: 40 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 99
E + VI+GTLF LKP I +I + K + + + + S + LED RI
Sbjct: 49 QEPGDRKSVIVGTLFIVSDLKPTIFDKIDRKSKEIKKIEAKTYYSRGMKYFLEDGSGRIE 108
Query: 100 LH----GNIDIHNQV--TGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR-----TTLS-- 146
L + N V TG+ + + G G+F D+ + P PR +LS
Sbjct: 109 LEFPDISRVYQRNFVISTGMCIGVSGVMAERGRFLAEDILF--PFSYPRDLPVSKSLSSG 166
Query: 147 -----------NNENK----------YVNHSSIEVDLMPGEF------------------ 167
++ENK Y+ ++ +M G F
Sbjct: 167 KKICFISGPSISSENKSRERMMVIIDYLRTVGVKEYIMIGGFFDESKEVDKHMLSSLDDV 226
Query: 168 ---------------DPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGT 212
D + LP P+HP LF K + TNP E++ + ++ T
Sbjct: 227 LRYVEGRIDLVPNIKDFGSRVLPLLPIHPKLFTSPVKTN-----TNPCRLEVDNRNVLIT 281
Query: 213 SGQPVSDIAKF--------------------------------SNLSNPLDILEYTLRCG 240
+ + D+ K+ SN N + L ++ G
Sbjct: 282 TRFVIEDLLKYLPQDLGDVQGKSFEYKMHLDMEKIDGAVPRSMSNEGNIVSALAVLMKAG 341
Query: 241 HVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFF 300
H+ PTAPDT+ PF DP ++ D + G+ +F E D ++P F
Sbjct: 342 HICPTAPDTIQSVPFSGRDPFVVTEQVDYFCVGDTDEFLEGRSE---DGTTLFFTIPRFT 398
Query: 301 SSRTVAILNLST 312
V +L++ T
Sbjct: 399 KRHEVVVLDMET 410
>gi|429962362|gb|ELA41906.1| hypothetical protein VICG_01090 [Vittaforma corneae ATCC 50505]
Length = 392
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 26/194 (13%)
Query: 138 VFNPRTTLSNNENKYVNHSSI---------EVDLMPGEFDPANTTLPQQPLHPCLFPEAS 188
VF T SN E + + ++I ++ L+PG DP LPQ PLH LF +
Sbjct: 196 VFGDIYTESNREPDFSDFNNIFNELNDFKGQIVLVPGPNDPTTKMLPQNPLHQ-LFFDQR 254
Query: 189 KYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSN--LSNP--------LDILEYTLR 238
+ +++P + GK ++ + Q ++D+ K++ ++ P DILE +R
Sbjct: 255 LSTCLRNLSHPAQETVCGKKVVFMNNQILNDLRKYTMNIVAGPQTPIVLGDADILEQLIR 314
Query: 239 CGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPD 298
+AP PDT+ PF+++DP +I+ C + G K +I++ + + +PD
Sbjct: 315 IRLIAPNCPDTVGSTPFFEHDPFLIDDCNYLVCGG------CKEFQIKRVGKIVAVCIPD 368
Query: 299 FFSSRTVAILNLST 312
F S + + + S+
Sbjct: 369 FSKSHSAVLADFSS 382
>gi|387213714|gb|AFJ69168.1| hypothetical protein NGATSA_3043900, partial [Nannochloropsis
gaditana CCMP526]
Length = 83
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 233 LEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETK 281
+E TL H+APTAPDTLACY F D+DP ++ S P VYF GNQ F +
Sbjct: 1 MEKTLHWRHLAPTAPDTLACYSFCDDDPFVLPSLPHVYFAGNQPAFAAR 49
>gi|269861193|ref|XP_002650310.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Enterocytozoon bieneusi H348]
gi|220066258|gb|EED43748.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Enterocytozoon bieneusi H348]
Length = 367
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 141/350 (40%), Gaps = 67/350 (19%)
Query: 15 QSKFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV 74
Q +F+ + I K++ + + + + +TE C+I LF +K +I I++
Sbjct: 20 QYRFKVLSNYIFLPKNIDI-PIKKIGKVNTELCMIKAILFIKSNIKSSIFNTINQVSNKK 78
Query: 75 PQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDV 132
+++ + +ED+ I ++ D++N +TG+V+ G NG F + +
Sbjct: 79 NNNTKEVYINSDTKYFIEDDDCTIDINFICDLYNNYLITGMVLGFIGR-CENGIFNCTQI 137
Query: 133 CYATPVFNPRTTLSN------------NEN------------------------------ 150
Y + + N N N
Sbjct: 138 VYPSDALGNSNNIKNEKRLLLFSNILINNNFEYILPILDLFKNKFDDVVLIGTIFDINMH 197
Query: 151 --------KYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIF 202
+++N + + ++PG DP + LPQ PLH +F + K ++NP
Sbjct: 198 NWDFSRFERFLNTFNGMMYIIPGYGDPTSCFLPQTPLHRMIFNNSKKVIL---LSNPSQI 254
Query: 203 EM-EGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPM 261
++ E + ++D+ ++ + PL+ LE + C H P +PDTL P + DP
Sbjct: 255 QINEKHFIFLDHNYILTDLLRYKHKGIPLNALEALINCRHAVPCSPDTLPSIPSSECDPF 314
Query: 262 IIESCPDVYFTGNQSKFETKTIEIEKD-KNVRLISVPDFFSSRTVAILNL 310
II+ D G +I ++ KN +I+VPDF ++T + ++
Sbjct: 315 IIDKV-DFVVAG-------ASITSHREFKNKFIITVPDFNKTKTAILFSM 356
>gi|313236510|emb|CBY11824.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+I VD+ G D + +P HP LFP A + P + + G ++ S +
Sbjct: 67 NISVDIFTGTGDSGSLHVPTAAFHPLLFPNA-RQGALKCFPTPVQYNVNGTSILHISNKV 125
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ + ++ N N ++ ++ L C H P APD + PF DP I + PD+ + +
Sbjct: 126 MDKLFEYGNFKNTIEAMKKLLICSHSCPIAPDVIPLAPFQTIDPFTIMTAPDIMWCVGED 185
Query: 277 KFETKTIEIEKDK-NVRLISVPDFFSSRTVAIL 308
++ E + K +V LI VP F R A+L
Sbjct: 186 FYQE---EFKYGKISVLLIQVP-CFKDRKQAVL 214
>gi|440492470|gb|ELQ75034.1| DNA polymerase delta, regulatory subunit 55 [Trachipleistophora
hominis]
Length = 353
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 122 VGNGKFKVSDVCYATPVFNPRTTLSNNE-NKYVNHSSIEVDLMPGEFDPANTTLPQQPL- 179
+ N K KV+D+ +F+ T + + +++ + ++P DP N LPQQP+
Sbjct: 167 ISNSK-KVTDLVIIGDIFDEVTKENADLLAQFLEDFGADAFIIPNINDPTNKLLPQQPIS 225
Query: 180 -----HPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILE 234
+ CLF + +P +FE+ K+L ++DI + S ++I++
Sbjct: 226 NRIIDYNCLF-----------LPSPALFEVGAKMLF-IPPVVINDIKLYGEPS-AINIMK 272
Query: 235 YTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLI 294
++ H+ PTAPDT+ C P+ DP I+ P+ FT KFE + E V
Sbjct: 273 MLVKIRHICPTAPDTVGCVPYNGEDPFILYEMPNYVFTLG-DKFEKEMGE------VSYF 325
Query: 295 SVPDFFSSRTVAILNLSTLECHSLVVE 321
+P F S+ V +L L ++ +E
Sbjct: 326 VLPSFSKSKQVILLTLDKRNFETVALE 352
>gi|313214758|emb|CBY41028.1| unnamed protein product [Oikopleura dioica]
Length = 183
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+I VD+ G D + +P HP LFP A + P + + G ++ S +
Sbjct: 14 NISVDIFTGTGDSGSLHVPTAAFHPLLFPNA-RQGALKCFPTPVQYNVNGTSILHISNKV 72
Query: 217 VSDIAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQS 276
+ + ++ N N ++ ++ L C H P APD + PF DP I + PD+ + +
Sbjct: 73 MDKLFEYGNFKNTIEAMKKLLICSHSCPIAPDVIPLAPFQTIDPFTIMTAPDIMWCVGED 132
Query: 277 KFETKTIEIEKDK-NVRLISVPDFFSSRTVAIL 308
++ E + K +V LI VP F R A+L
Sbjct: 133 FYQE---EFKYGKISVLLIQVP-CFKDRKQAVL 161
>gi|449330175|gb|AGE96437.1| DNA polymerase delta small subunit [Encephalitozoon cuniculi]
Length = 424
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 41/235 (17%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
N+ +V+A VG ++ + + P R LS + + + + L+P
Sbjct: 183 NRERMMVIADYLRMVGVHEYVIIGCLFGGPREVDRQILSELDG-ILGYLGTSISLVPNIG 241
Query: 168 DPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKF---- 223
D + LP +P+HP LF T HP NP ++GK ++ T+ V D+ K+
Sbjct: 242 DFGSRILPLEPIHPKLFASPV---TSHP--NPSSLVVDGKRILVTTRFVVEDLLKYLPQD 296
Query: 224 --------------------SNL--------SNPLDILEYTLRCGHVAPTAPDTLACYPF 255
NL N ++ L ++ GHV PTAPDTL PF
Sbjct: 297 LRDVQGEAFEYKMHLDMAEIGNLVPRNMADEKNIINALSTLVKVGHVCPTAPDTLQSVPF 356
Query: 256 YDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
+ DP ++ D + G+ +F E D L +VP F V IL++
Sbjct: 357 SEKDPFVVTDQTDYFCVGDTDRFLDGQSE---DGATLLFTVPRFSRKHEVVILDM 408
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED-----ELQRIP 99
E CVI+GTLF LKP I I + K + + + + + + LED EL+ +
Sbjct: 53 ERCVIVGTLFIASDLKPTIFDRIDRKSKKIKEIEAKTYHTQEVKYFLEDGSGKIELEFLD 112
Query: 100 LHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR 142
+ H + TG+ + + G G+F DV + P +PR
Sbjct: 113 MKAVYRKHFVISTGMCIGVTGRMAEKGRFLAEDVLF--PFSSPR 154
>gi|85014271|ref|XP_955631.1| DNA polymerase delta regulatory subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171325|emb|CAD27050.1| DNA POLYMERASE DELTA SMALL SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 424
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 41/235 (17%)
Query: 108 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEF 167
N+ +V+A VG ++ + + P R LS + + + + L+P
Sbjct: 183 NRERMMVIADYLRMVGVHEYVIIGCLFGGPREVDRQILSELDG-ILGYLGTSISLVPNIG 241
Query: 168 DPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKF---- 223
D + LP +P+HP LF T HP NP ++G+ ++ T+ V D+ K+
Sbjct: 242 DFGSRILPLEPIHPKLFASPV---TSHP--NPSSLVVDGRRILVTTRFVVEDLLKYLPQD 296
Query: 224 --------------------SNL--------SNPLDILEYTLRCGHVAPTAPDTLACYPF 255
NL N ++ L ++ GHV PTAPDTL PF
Sbjct: 297 LRDVQGEAFEYKMHLDMAEIGNLVPRNMADEKNIINALSTLVKVGHVCPTAPDTLQSVPF 356
Query: 256 YDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
+ DP ++ D + G+ +F E D L +VP F V IL++
Sbjct: 357 SEKDPFVVTDQTDYFCVGDTDRFLDGQSE---DGATLLFTVPRFSRKHEVVILDM 408
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED-----ELQRIP 99
E CVI+GTLF LKP I I + K + + + + S + LED EL+ +
Sbjct: 53 ERCVIVGTLFIASDLKPTIFDRIDRKSKKIKEIEAKTYHSQEVKYFLEDGSGKIELEFLD 112
Query: 100 LHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFNPR 142
+ H + TG+ + + G G+F DV + P +PR
Sbjct: 113 MKAVYRKHFVISTGMCIGVTGRMAEKGRFLAEDVLF--PFSSPR 154
>gi|358336103|dbj|GAA54662.1| DNA polymerase delta subunit 2 [Clonorchis sinensis]
Length = 341
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 19/144 (13%)
Query: 11 FTGNQ---SKFETKTIEIEKGKSVSVLKLSDLNETDTEE-CVIIGTLFKHQQLKPNILKE 66
FT Q S T+ + S L + LN T+E CVI+GTL+K +LKP+IL++
Sbjct: 42 FTAAQPVLSAAATRQWAASEHPSRDQLPIRSLNSLVTDEKCVILGTLYKEMKLKPSILRD 101
Query: 67 ISEE------LKLVPQPQHTHFVSDSDELILEDELQRI-----PLHGNIDIHNQVTGVVV 115
++ ++L +T SD D + LED +QRI LHG + + N TGVVV
Sbjct: 102 LANSEFGQGGVQLQGDTLNTLMSSD-DSIFLEDNVQRIRVVMDGLHG-VSVTNLATGVVV 159
Query: 116 AIKGT--PVGNGKFKVSDVCYATP 137
A+ G G F V D+ + P
Sbjct: 160 ALLGVEPEHAQGSFHVEDILFLEP 183
>gi|219564285|dbj|BAH03711.1| DNA polymerase III (delta) subunit [Saccharomyces pastorianus]
Length = 195
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 39 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQ 96
L+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE
Sbjct: 42 LDIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESG 101
Query: 97 RIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 138
R+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 102 RVLLVGDFIRSTPFITGVVVGILGVEAEAGTFQVLDICYPTPL 144
>gi|303390663|ref|XP_003073562.1| DNA polymerase delta regulatory subunit B [Encephalitozoon
intestinalis ATCC 50506]
gi|303302709|gb|ADM12202.1| DNA polymerase delta regulatory subunit B [Encephalitozoon
intestinalis ATCC 50506]
Length = 425
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 41 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 100
E DT CVI+GTLF LKP+I +I + K + + + + ++ + +LED RI L
Sbjct: 50 ELDTSTCVIVGTLFVASDLKPSIFDKIDRKSKKLKEVETKTYYTEDIKYLLEDGSGRIEL 109
Query: 101 H----GNIDIHNQV--TGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRT 143
G+I + V TG+ V ++G GKF D+ + P NPR+
Sbjct: 110 EFLDVGDIYRKHFVLCTGMCVGVQGRRAKKGKFLAEDIIF--PFSNPRS 156
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 153 VNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGT 212
+ ++ +++L+P D + LP P+HP LF A NP +++G+ ++ T
Sbjct: 228 LGYAKAKINLVPNTGDFGSKILPLMPVHPKLFTFAVASHA-----NPCRLDIDGRKVLTT 282
Query: 213 SGQPVSDIAKF--------------------------------SNLSNPLDILEYTLRCG 240
+ + DI ++ ++ N ++ + ++ G
Sbjct: 283 TRFVIEDILRYLPQDLKDVQGEAFEYKMHLDMEKIEDIRPKSMNSERNIINAMRVLMKAG 342
Query: 241 HVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFF 300
HV PTAPDT+ PF D ++ D + G +F E D + ++P F
Sbjct: 343 HVCPTAPDTVPSVPFSGKDLFVVADPIDYFCVGGTDEFLDGQSE---DNSTLFFTIPKFS 399
Query: 301 SSRTVAILNLSTLE 314
V +L+ T E
Sbjct: 400 KRHEVVVLDTGTRE 413
>gi|164663045|ref|XP_001732644.1| hypothetical protein MGL_0419 [Malassezia globosa CBS 7966]
gi|159106547|gb|EDP45430.1| hypothetical protein MGL_0419 [Malassezia globosa CBS 7966]
Length = 218
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGN 103
+ C+++GT + QLKP++L++I+ +L L P P+ ++ ++ DEL LED+ R+ + G+
Sbjct: 74 QMCMVVGTFYSAMQLKPDVLQDIARDLSLPAPPPRTSYVDTEHDELFLEDQSGRVRVVGD 133
Query: 104 I------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 134
+ VTGVV + G +G +V V +
Sbjct: 134 LLRPGTQLAQTCVTGVVACVIGIETPDGDLEVHHVFF 170
>gi|170061747|ref|XP_001866370.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
gi|167879867|gb|EDS43250.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
Length = 237
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 55 KHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 98
KH +LKPNIL+EISEE +L PQP + + + D LILED LQ I
Sbjct: 47 KHHELKPNILREISEEGQLAPQPPRSRYTIEGDILILEDALQHI 90
>gi|340345786|ref|ZP_08668918.1| DNA-directed DNA polymerase [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339520927|gb|EGP94650.1| DNA-directed DNA polymerase [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 484
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
S I++ +MPG DP LPQ + + V NP + + G +M GQ
Sbjct: 299 SYIKIFIMPGNHDPGRRALPQPAIPKKYNSGLWERENVFMVGNPAVVSLNGVKVMMFHGQ 358
Query: 216 PVSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
+ DI K + + P ++++ LR H++P P + D M+I+ PD++
Sbjct: 359 SIDDIVKTTPGLSYDKPTKVMKHLLRARHLSPIYGSQTPIAPEME-DLMVIDDIPDIFHV 417
Query: 273 GNQSKFE 279
G+ + E
Sbjct: 418 GHVHRAE 424
>gi|329766187|ref|ZP_08257746.1| DNA polymerase II small subunit [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137458|gb|EGG41735.1| DNA polymerase II small subunit [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 481
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
I++ +MPG DP LPQ + + V NP + + G +M GQ +
Sbjct: 300 IKIFIMPGNHDPGRRALPQPAIPKKYNSGLWERENVFMVGNPAVVSLNGVKVMMFHGQSI 359
Query: 218 SDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
DI K + + P +++++ LR H++P P + D M+I+ PD++ G+
Sbjct: 360 DDIVKTTPGLSYDKPTNVMKHLLRARHLSPIYGSQTPIAPEIE-DLMVIDEIPDIFHVGH 418
Query: 275 QSKFE 279
+ E
Sbjct: 419 VHRAE 423
>gi|407463389|ref|YP_006774706.1| DNA polymerase II small subunit [Candidatus Nitrosopumilus
koreensis AR1]
gi|407047011|gb|AFS81764.1| DNA polymerase II small subunit [Candidatus Nitrosopumilus
koreensis AR1]
Length = 481
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+I++ +MPG DP LPQ + V NP + + G +M GQ
Sbjct: 298 NIKIVIMPGNHDPGRRALPQPAIPKKYNSGLWDRENVIMVGNPAVVSLNGVKVMMFHGQS 357
Query: 217 VSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K + + P +++++ LR H++P P D M+IE PD++ G
Sbjct: 358 IDDIVKTTPGLSYDKPTNVMKHLLRARHLSPIYGSQTPIAPEM-QDLMVIEDIPDIFHVG 416
Query: 274 NQSK 277
+ K
Sbjct: 417 HVHK 420
>gi|161527514|ref|YP_001581340.1| DNA polymerase II small subunit [Nitrosopumilus maritimus SCM1]
gi|160338815|gb|ABX11902.1| DNA-directed DNA polymerase [Nitrosopumilus maritimus SCM1]
Length = 481
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+I++ +MPG DP LPQ + V NP + + G +M GQ
Sbjct: 298 NIKIIIMPGNHDPGRRALPQPAIPKKYNSGLWDRENVIMVGNPAVVSLNGVKVMMFHGQS 357
Query: 217 VSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K + + P +++++ LR H++P P D M+IE PD++ G
Sbjct: 358 IDDIVKTTPGLSYDKPTNVMKHLLRARHLSPIYGSQTPIAPEM-QDLMVIEDIPDIFHVG 416
Query: 274 NQSK 277
+ K
Sbjct: 417 HVHK 420
>gi|386874777|ref|ZP_10117003.1| nucleic acid-binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386807400|gb|EIJ66793.1| nucleic acid-binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 481
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++++ +MPG DP LPQ + V NP + + G +M GQ
Sbjct: 298 NVKIIIMPGNHDPGRRALPQPAIPKKYNSGLWDRENVIMVGNPAVVSLNGVRVMMFHGQS 357
Query: 217 VSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K + + P +++++ LR H++P P + D ++IE PD++ G
Sbjct: 358 IDDIVKTTPGLSYDKPTNVMKHLLRARHLSPIYGSQTPIAPEME-DLLVIEDIPDIFHVG 416
Query: 274 NQSKFE 279
+ + E
Sbjct: 417 HVHRAE 422
>gi|123448441|ref|XP_001312951.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121894816|gb|EAY00022.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 162 LMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVS--D 219
L+PG DP + +P QP +P + T TNP + ++G L+G +G + D
Sbjct: 214 LIPGFGDPTESVIPIQPFNPAFISPLNMECT----TNPGLINIDGMKLLGMTGNIIDKID 269
Query: 220 IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGNQSKFE 279
+ S IL + ++AP++P + C + D + ++ P V+ G
Sbjct: 270 CDQLSFHERQKMILSWR----YIAPSSPTRIPC-EVCEKDILSLDFMPQVFVAGG----- 319
Query: 280 TKTIEIEKDKNVRLISVPDFFSSRTVAILN 309
++ +E + +IS+PD+ +S + A+LN
Sbjct: 320 SQNLEYSMADDTLVISIPDYITSHSAALLN 349
>gi|407465777|ref|YP_006776659.1| DNA polymerase II small subunit [Candidatus Nitrosopumilus sp. AR2]
gi|407048965|gb|AFS83717.1| DNA polymerase II small subunit [Candidatus Nitrosopumilus sp. AR2]
Length = 481
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
++++ +MPG DP LPQ + + V NP + + G + GQ
Sbjct: 298 NVKIIIMPGNHDPGRRALPQPAIPEKYNSGLWERENVFMVGNPAVVSLNGVKVSMFHGQS 357
Query: 217 VSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTG 273
+ DI K + + P D++ + LR H++P P + D M+I+ PD++ G
Sbjct: 358 IDDIVKTTPGLSYDRPTDVMRHLLRARHLSPIYGSQTPIAPEME-DLMVIQDIPDIFHVG 416
Query: 274 N 274
+
Sbjct: 417 H 417
>gi|52548908|gb|AAU82757.1| DNA-directed DNA polymerase, subunit 1 [uncultured archaeon
GZfos19C8]
Length = 492
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPL---HPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGT 212
S I V + PG D + PQ PL LFP + + V+NP ++ +L++
Sbjct: 314 SHIHVIIAPGNHDAVRSAEPQPPLPDDLKKLFPGDTCF-----VSNPSYIKIGDRLVLIY 368
Query: 213 SGQPVSD----IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPD 268
GQ D +++ S S P D++ LR HVAP ++ P +D +I+ PD
Sbjct: 369 HGQSYDDFVNSVSRLS-YSKPEDVMVEMLRRRHVAPIYGTNISIVP-NGHDYGVIDQVPD 426
Query: 269 VYFTGNQSKFETKTIEIEKDKNVRLIS 295
++ G+ T T+ + K +NV LI+
Sbjct: 427 IFHCGH-----THTVGVSKYRNVLLIN 448
>gi|403339974|gb|EJY69249.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 497
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 35/268 (13%)
Query: 48 VIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDELQRIPLHGNIDI 106
V+IGTLFK LKP IL + + ++ + + S D L+LED RI + I
Sbjct: 111 VLIGTLFKEMPLKPCILSNL---VGVISDDKSVDRYCSPEDYLVLEDSSGRIKIKKQRKI 167
Query: 107 H--NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMP 164
+ VTG +V G NG F+V D C+A K ++++ +L+
Sbjct: 168 NPDEFVTGAIVGFLGQVDKNGNFEVYDFCFAGLDLAQSGLQIPQTVKVDKNTAVLEELIK 227
Query: 165 GEFDPANTTLPQQPL-------HPCLFPEASKYSTFHPVTNPYIFEMEGKL--------L 209
G D +N+ + + ++ + + Y + + E E KL +
Sbjct: 228 GINDNSNSNQGKNIVAFISGLEFGSVYNKQTIYQLLQFLRGDFGTEQEQKLSASIKRLIV 287
Query: 210 MGTSGQPVSD---IAKFSNLSNPL------DILEYTLRCGHVAPTAP-----DTLACYPF 255
G S Q V + + + S + + ++ E T + A D +
Sbjct: 288 CGNSIQEVEEQDLVNRGSFRTQKINDNVYTELFEVTDQFEEFLNKAAQFIDIDIMPGEND 347
Query: 256 YDNDPMIIESCPDVYFTGNQSKFETKTI 283
+ DP +I+ P VYF GNQ + TI
Sbjct: 348 FQKDPFVIQEIPHVYFCGNQETYAEDTI 375
>gi|57641837|ref|YP_184315.1| DNA polymerase II small subunit [Thermococcus kodakarensis KOD1]
gi|57160161|dbj|BAD86091.1| DNA polymerase II, small subunit [Thermococcus kodakarensis KOD1]
Length = 735
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK--YSTFHP 195
+F+ L+N + +H I + + PG D A T LPQ P + E +K Y +
Sbjct: 537 IFDQYEALANLLKQVPDH--ITMFIGPGNHDAARTALPQ----PGFYEEYAKPLYKLKNA 590
Query: 196 V--TNPYIFEMEGKLLMGTSGQPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTL 250
V +NP + + G+ + G+ + D+ F + P + + L+ H+APT + +
Sbjct: 591 VIISNPAVIRLHGRDFLVAHGRGIEDVVDFVPNRSHHRPAEAMVELLKLRHIAPTFGNKV 650
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKT 282
P + D ++IES PD++ G+ + KT
Sbjct: 651 PIAPDPE-DTLVIESVPDLFQAGHVHVMQYKT 681
>gi|198463260|ref|XP_002135465.1| GA28305 [Drosophila pseudoobscura pseudoobscura]
gi|198151182|gb|EDY74092.1| GA28305 [Drosophila pseudoobscura pseudoobscura]
Length = 97
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 23/77 (29%)
Query: 179 LHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPLDILEYTLR 238
+H C+FP++++ ++F VTNPY FE G G + P
Sbjct: 1 MHKCMFPQSAQLTSFQAVTNPYYFE--GIFSGGPTLHP---------------------N 37
Query: 239 CGHVAPTAPDTLACYPF 255
G P APDTLACYP+
Sbjct: 38 MGACGPIAPDTLACYPY 54
>gi|70914220|ref|XP_731769.1| DNA polymerase delta small subunit [Plasmodium chabaudi chabaudi]
gi|56501978|emb|CAH87757.1| DNA polymerase delta small subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 104
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 81 HFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 135
++ D D L EDE R+ L GNI+ + VTG+ V IKG + NG V ++ YA
Sbjct: 6 NYSQDQDVLFFEDETARLKLEGNINSDHYVTGLTVIIKGVGMSNGSIYVDELIYA 60
>gi|149047650|gb|EDM00320.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_e [Rattus norvegicus]
Length = 133
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 28 GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 75
G V V KL +L E+C ++GTLFK L+P+IL+EISEE L+P
Sbjct: 74 GSQVEVKKLCELQ--PGEQCCVVGTLFKAMPLQPSILREISEEHNLIP 119
>gi|300701918|ref|XP_002995059.1| hypothetical protein NCER_102193 [Nosema ceranae BRL01]
gi|239603743|gb|EEQ81388.1| hypothetical protein NCER_102193 [Nosema ceranae BRL01]
Length = 351
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 80/324 (24%)
Query: 25 IEKGKSVSVL-KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 83
I K +S+ + ++ DLN+ TE+C IIG LF LK I +++ K V + T ++
Sbjct: 27 ISKPQSIDICNRIHDLNK-QTEKCFIIGILFISSDLKTTIFDKLNTNKKKVEFKKST-YI 84
Query: 84 SDSDELILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATP----- 137
S + +EDE RI + N + + TG+ + G + N F V ++ +
Sbjct: 85 SKDIKYFVEDETGRIEIMLNSKQKDFLCTGMCLGFIGN-LKNNIFNVEEIVFPNAPEKKE 143
Query: 138 --------VFNPRTTLSNNEN--------KYVNHSSIEVDLMPGEFDPANTTLPQQPLHP 181
+F ++NN+N Y+ I+ ++ G F + L ++ L
Sbjct: 144 TVLSTKKVIFVSGLFIANNKNLTGIKVITDYLFMHGIDELVIFGRFFDDDFNLFKKCLES 203
Query: 182 C-----LFPEASKYSTFH----PV------------TNPYIFEMEGKLLMGTSGQPVSDI 220
L PE +S PV +NP I ++ GK + TS + + D+
Sbjct: 204 LHSNIILIPEYRDFSCMSFPLLPVHKKLFKKNIISYSNPCIVDLCGKSVAFTSHKILQDL 263
Query: 221 AKF---------------------------------SNLSNPLDILEYTLRCGHVAPTAP 247
K+ N N L +++ +R +AP P
Sbjct: 264 LKYIDQDIQGIQYEADGYRMHLKEEKMDTTPVHVQDFNTLNLLKVVKGLIRARLLAPNGP 323
Query: 248 DTLACYPFYDNDPMIIESCPDVYF 271
DTL+ P+ +++ I+ + +F
Sbjct: 324 DTLSIIPYSESEVFFIDKKIETFF 347
>gi|341582523|ref|YP_004763015.1| DNA polymerase II small subunit [Thermococcus sp. 4557]
gi|340810181|gb|AEK73338.1| DNA polymerase II small subunit [Thermococcus sp. 4557]
Length = 715
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+F+ L+N +H I + + PG D A T LPQ + K ++
Sbjct: 517 IFDQYEALANLLRNVPDH--ITMFIGPGNHDAARTALPQPGFYDEYARPLKKLKNAVMIS 574
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKF-SNLSN--PLDILEYTLRCGHVAPTAPDTLACYP 254
NP + + G+ + G+ + D+ F N S+ P + + L+ H+APT + + P
Sbjct: 575 NPAVVRLHGRDFLIAHGRGIEDVVSFIPNRSHHRPAEAMLDLLKLRHLAPTFGEKVPVAP 634
Query: 255 FYDNDPMIIESCPDVYFTGNQSKFETK 281
D ++IES PD++ G+ E K
Sbjct: 635 -DSEDTLVIESVPDLFQAGHVHVMEYK 660
>gi|312137398|ref|YP_004004735.1| DNA polymerase ii small subunit [Methanothermus fervidus DSM 2088]
gi|311225117|gb|ADP77973.1| DNA polymerase II small subunit [Methanothermus fervidus DSM 2088]
Length = 470
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 155 HSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSG 214
I++ + PG D + PQQPL V+NP I ++G +M G
Sbjct: 292 RKDIKIIIAPGNHDASRIAEPQQPLEKEYAKALYDLPNAEFVSNPSIICIDGLKIMIYHG 351
Query: 215 QPVSDIAKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
+ D+A +N S+ P +I+ L H+AP P D ++I++ PD++
Sbjct: 352 RSFDDMAISANFSHDKPAEIMAELLEKRHLAPIYGLRTPIAP-EPEDHLVIDTIPDIFHA 410
Query: 273 GN 274
G+
Sbjct: 411 GH 412
>gi|385304640|gb|EIF48649.1| dna polymerase delta subunit [Dekkera bruxellensis AWRI1499]
Length = 170
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 17 KFETKTIEIEKGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ 76
K++ +TI +K K V+ L L+ +IGT+F + KPNIL+E++ + P+
Sbjct: 7 KWKDETINGQKAKYVNKL----LDVKSMVPSYVIGTVFMDMKYKPNILQEVTGNIYAAPE 62
Query: 77 PQ-----------HTHFVSD--SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPV 122
+ H SD +D+++LED+ R+ L G +D +TGVVV G
Sbjct: 63 FKEDSEYDELERTRIHSYSDPATDQVMLEDDSGRLLLDGELLDKVVLMTGVVVGALGDDC 122
Query: 123 GNGKF 127
G F
Sbjct: 123 GCWCF 127
>gi|268324173|emb|CBH37761.1| probable DNA polymerase II small subunit [uncultured archaeon]
Length = 492
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 158 IEVDLMPGEFDPANTTLPQQPL---HPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSG 214
I V + PG D + PQ PL LFP+ + + V++P ++ +L++ G
Sbjct: 316 IHVIIAPGNHDAVRSAEPQPPLPDDLKKLFPDDTCF-----VSSPSYIKIGDRLVLIYHG 370
Query: 215 QPVSD----IAKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
Q D +++ S S P +++ LR HVAP ++ P +D +I+ PD++
Sbjct: 371 QSYDDFVNSVSRLS-YSKPEEVMVEMLRRRHVAPIYGTNISIVP-NGHDYGVIDPVPDIF 428
Query: 271 FTGNQSKFETKTIEIEKDKNVRLIS 295
G+ T T+ + K +NV LI+
Sbjct: 429 HCGH-----THTVGVSKYRNVLLIN 448
>gi|212224794|ref|YP_002308030.1| DNA polymerase II small subunit [Thermococcus onnurineus NA1]
gi|212009751|gb|ACJ17133.1| DNA polymerase II, small subunit [Thermococcus onnurineus NA1]
Length = 701
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+F+ L+N + +H I + + PG D A T LPQ + K ++
Sbjct: 503 IFDQYEALANLLSNVPDH--ITMFIGPGNHDAARTALPQPGFYEEYARPLLKLKNAVIIS 560
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYP 254
NP + ++ G+ + G+ + D+ F P + + L+ H+APT + + P
Sbjct: 561 NPAVVKLHGRDFLIAHGRGIEDVVSFIPNRTHHRPAEAMLDLLKLRHLAPTFGEKVPIAP 620
Query: 255 FYDNDPMIIESCPDVYFTGN 274
D ++IES PD++ G+
Sbjct: 621 -DPEDTLVIESVPDLFQAGH 639
>gi|315426861|dbj|BAJ48482.1| DNA polymerase II small subunit [Candidatus Caldiarchaeum
subterraneum]
gi|343485579|dbj|BAJ51233.1| DNA polymerase II small subunit [Candidatus Caldiarchaeum
subterraneum]
gi|374854912|dbj|BAL57782.1| DNA polymerase II small subunit [uncultured crenarchaeote]
Length = 492
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+IE+ +PG +P LPQ PL +Y ++NP +G+ + GQ
Sbjct: 313 NIEIVFIPGNHEPVRKALPQPPLQDRYRKLLDEYRRMIHLSNPAELVFDGRRVTVYHGQG 372
Query: 217 VSDIAK------FSNL-SNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDV 269
+ DI + +S L N +++ LR H+AP ++ P ++ +I+E P++
Sbjct: 373 LDDIIQSLPTTSYSTLPENAAEVVTALLRYRHLAPIYGGSVQLLPSKEDRLVIVEQ-PNL 431
Query: 270 YFTGN 274
TG+
Sbjct: 432 LQTGH 436
>gi|336475962|ref|YP_004615103.1| DNA-directed DNA polymerase [Methanosalsum zhilinae DSM 4017]
gi|335929343|gb|AEH59884.1| DNA-directed DNA polymerase [Methanosalsum zhilinae DSM 4017]
Length = 513
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHP-----VTNPYIFEMEGKLLMG 211
+I+V + PG D PQ L PE + +F P V NP + +EG ++
Sbjct: 341 NIQVVISPGNHDAVRQAEPQPKL-----PE--RIRSFFPDHITFVGNPALLNLEGVKVLM 393
Query: 212 TSGQPVSD-IAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPD 268
G+ + D +A +S NP + +R H++P ++ P ND +IE PD
Sbjct: 394 YHGRSIDDMVAAVPGVSYQNPTTAMVEMMRRRHISPIYGSRVSIAP-EKNDHFVIEQVPD 452
Query: 269 VYFTGNQSKFETKTIEIEKDKNVRLIS 295
+ G+ T+ E+ +NV LI+
Sbjct: 453 IVHCGH-----VHTVGAERYRNVVLIN 474
>gi|361124771|gb|EHK96842.1| putative DNA polymerase subunit delta-2 [Glarea lozoyensis 74030]
Length = 318
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 25/88 (28%)
Query: 47 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI 106
C IIGT+F LKPNIL +IS+ +D+ RI L G+ +
Sbjct: 94 CWIIGTIFMDMPLKPNILDDISK----------------------DDKSGRIRLVGHA-L 130
Query: 107 HNQ--VTGVVVAIKGTPVGNGKFKVSDV 132
N+ VTG +VA+ GT NG+F+V D+
Sbjct: 131 ENEMLVTGCIVAVMGTENSNGEFEVVDI 158
>gi|240102185|ref|YP_002958493.1| DNA polymerase II small subunit [Thermococcus gammatolerans EJ3]
gi|239909738|gb|ACS32629.1| DNA polymerase II small subunit (dp1/polB) [Thermococcus
gammatolerans EJ3]
Length = 660
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+F+ L+N +H I V + PG D A T LPQ + + ++
Sbjct: 462 IFDQYEALANLLRNVPDH--IHVFIGPGNHDAARTALPQPGFYEEYARPIYRLKNVTIIS 519
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIA-KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYP 254
NP + ++ G+ + G+ + D+ + N S+ P + + L+ H+APT + P
Sbjct: 520 NPALIKLHGREFLIAHGRGIEDVVTEIPNRSHHRPAEAMVELLKLRHLAPTFGGKVPIAP 579
Query: 255 FYDNDPMIIESCPDVYFTGN 274
+ D ++IES PD++ G+
Sbjct: 580 DPE-DLLVIESVPDLFQAGH 598
>gi|118577011|ref|YP_876754.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Cenarchaeum symbiosum A]
gi|118195532|gb|ABK78450.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Cenarchaeum symbiosum A]
Length = 476
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 18/127 (14%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+++ + PG DP LPQ + + + NP + + G + GQ +
Sbjct: 302 VQIFITPGNHDPGRRALPQPAIPKKYHAGLWERGNVEMLGNPAMISLNGVKVGIFHGQSI 361
Query: 218 SDIAKFS---NLSNPLDILEYTLRCGHVA-------PTAPDTLACYPFYDNDPMIIESCP 267
DI K + + P+D++ + L+ H + P AP+T D M+I+ P
Sbjct: 362 DDIVKTTPGLSYDRPVDVMRHLLKVRHYSPIFGSQTPIAPET--------EDMMVIDEVP 413
Query: 268 DVYFTGN 274
D++ G+
Sbjct: 414 DIFHMGH 420
>gi|432328333|ref|YP_007246477.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Aciduliprofundum sp. MAR08-339]
gi|432135042|gb|AGB04311.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Aciduliprofundum sp. MAR08-339]
Length = 478
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 158 IEVDLMPGEFDPANTTLPQQPL-H--PCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSG 214
I+V ++PG D T PQ PL H LF +++ ++NP +F + G + G
Sbjct: 308 IKVIMIPGNHDLVRNTEPQPPLPHDIQSLFNGNAEF-----LSNPSVFSLHGYTFLIYHG 362
Query: 215 QPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYF 271
++D+ + ++ N I+ + L H+ P+ + P D M I+ PDV+
Sbjct: 363 ATINDLVELIPGASYENIAPIMSHILEMRHLGPSYGGKVPIAPL-PRDFMAIDLVPDVFI 421
Query: 272 TGNQSKF 278
TG+ F
Sbjct: 422 TGHVHAF 428
>gi|315425095|dbj|BAJ46767.1| DNA polymerase II small subunit [Candidatus Caldiarchaeum
subterraneum]
gi|315428039|dbj|BAJ49627.1| DNA polymerase II small subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 492
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 157 SIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQP 216
+IE+ +PG +P LPQ PL +Y ++NP +G+ + GQ
Sbjct: 313 NIEIVFIPGNHEPVRKALPQPPLQDRYRKLLDEYRRMIHLSNPAELVFDGRRVTVYHGQG 372
Query: 217 VSDIAK------FSNL-SNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDV 269
+ DI + +S L N +++ LR H+AP ++ P + D ++I P +
Sbjct: 373 LDDIIQSLPTTSYSTLPENAAEVVTALLRYRHLAPIYGGSVQLLPSKE-DRLVIVDQPHL 431
Query: 270 YFTGN 274
TG+
Sbjct: 432 LQTGH 436
>gi|409096352|ref|ZP_11216376.1| DNA polymerase II small subunit [Thermococcus zilligii AN1]
Length = 690
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+F+ L+N H I + + PG D A T +PQ + + ++
Sbjct: 492 IFDQYEALANLLRNVPKH--IHMFIGPGNHDAARTAVPQPGFYEEYARPIFRLKNATIIS 549
Query: 198 NPYIFEMEGKLLMGTSGQPVSDI-AKFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYP 254
NP + + G+ + G+ + D+ ++ N S+ P + + L+ H+APT + P
Sbjct: 550 NPAVIRLHGRDFLVAHGRGIEDVVSEIPNRSHHRPAEAMVNLLKLRHLAPTFGGKVPIAP 609
Query: 255 FYDNDPMIIESCPDVYFTGNQSKFETK 281
D D ++IES PD++ G+ E +
Sbjct: 610 DPD-DLLVIESVPDLFQAGHVHVLEYR 635
>gi|375083614|ref|ZP_09730633.1| DNA polymerase II small subunit [Thermococcus litoralis DSM 5473]
gi|374741807|gb|EHR78226.1| DNA polymerase II small subunit [Thermococcus litoralis DSM 5473]
Length = 668
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK--YSTFHP 195
+F+ L+N + H I + + PG D A T LPQ P + E +K Y +
Sbjct: 471 IFDQYEALANLLSNVPEH--ITMFIGPGNHDAARTALPQ----PEFYREYAKPLYDLKNA 524
Query: 196 V--TNPYIFEMEGKLLMGTSGQPVSDIAKFS-NLSN--PLDILEYTLRCGHVAPTAPDTL 250
V +NP + ++ G+ + G+ + D+ + N+S+ P+ + L+ H+APT +
Sbjct: 525 VIISNPAVIDLHGREFLIVHGRGIEDVVSYVPNMSHHQPVKPMVQLLKLRHLAPTFGGKV 584
Query: 251 ACYPFYDNDPMIIESCPDVYFTGNQSKFETKTIEIEKDKNVRLISVPDFFSSRTVAILNL 310
P D ++IES PD+ G+ + V D+ R V ++N
Sbjct: 585 PIAP-DPEDLLVIESVPDLVQMGH-------------------VHVLDYQIYRGVFLINS 624
Query: 311 STLECHS 317
+T + +
Sbjct: 625 ATWQAQT 631
>gi|390961222|ref|YP_006425056.1| DNA polymerase II small subunit [Thermococcus sp. CL1]
gi|390519530|gb|AFL95262.1| DNA polymerase II small subunit [Thermococcus sp. CL1]
Length = 718
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 162 LMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIA 221
+ PG D A T LPQ + + ++NP + + G+ + G+ + D+
Sbjct: 542 IGPGNHDAARTALPQPGFYDEYARPLKRLKNAVIISNPAVIRLHGRDFLIAHGRGIEDVV 601
Query: 222 -KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
N S+ P + + L+ H+APT + + P D ++IES PD++ G+
Sbjct: 602 TALPNRSHHRPAEAMLDLLKLRHLAPTFGEKVPIAP-DPEDTLVIESVPDLFQAGH 656
>gi|350525927|ref|YP_004885463.1| DNA polymerase II small subunit [Thermococcus sp. AM4]
gi|345650746|gb|AEO14025.1| Archaeal DNA polymerase II small subunit [Thermococcus sp. AM4]
Length = 651
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT 197
+F+ L+N H I + PG D A T LPQ + + ++
Sbjct: 453 IFDQYEALANLLRNVPGH--IHTFIGPGNHDAARTALPQPGFYEEYARPIYRLKNVTIIS 510
Query: 198 NPYIFEMEGKLLMGTSGQPVSDIA-KFSNLSN--PLDILEYTLRCGHVAPTAPDTLACYP 254
NP + + G+ + G+ + D+ + N S+ P + + L+ H+APT + P
Sbjct: 511 NPAVIRLHGRDFLIAHGRGIEDVVTEIPNRSHHRPAEAMVELLKLRHLAPTFGGKVPVAP 570
Query: 255 FYDNDPMIIESCPDVYFTGN 274
D ++IES PD++ G+
Sbjct: 571 -DPEDLLVIESVPDLFQAGH 589
>gi|408402626|ref|YP_006860609.1| DNA polymerase II small subunit [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408363222|gb|AFU56952.1| DNA polymerase II small subunit [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 487
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 158 IEVDLMPGEFDPANTTLPQQPL-------HPCLFPEASKYSTFHPVTNPYIFEMEGKLLM 210
I++ ++PG DP LPQ + H P + + NP ++ G L+
Sbjct: 313 IKMLVIPGNHDPGRRALPQPAIPGKDLADHLYGLPNCTM------LGNPAFVDLNGVKLL 366
Query: 211 GTSGQPVSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
GQ + D+ + + S P + ++ L+ H+APT + P D M+I P
Sbjct: 367 MFHGQSLDDVIATTPGLSYSRPAEAMKVLLKARHLAPTYGERTPVAP-EQEDMMVITDVP 425
Query: 268 DVYFTGN 274
D++ G+
Sbjct: 426 DIFHAGH 432
>gi|300521508|gb|ADK25965.1| DNA polymerase D small subunit [Candidatus Nitrososphaera
gargensis]
Length = 487
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 158 IEVDLMPGEFDPANTTLPQQPL-------HPCLFPEASKYSTFHPVTNPYIFEMEGKLLM 210
I++ ++PG DP LPQ + H P + + NP ++ G L+
Sbjct: 313 IKMLVIPGNHDPGRRALPQPAIPGKDLADHLYGLPNCTM------LGNPAFVDLNGVKLL 366
Query: 211 GTSGQPVSDIAKFS---NLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCP 267
GQ + D+ + + S P + ++ L+ H+APT + P D M+I P
Sbjct: 367 MFHGQSLDDVIATTPGLSYSRPAEAMKVLLKARHLAPTYGERTPVAP-EQEDMMVITDVP 425
Query: 268 DVYFTGN 274
D++ G+
Sbjct: 426 DIFHAGH 432
>gi|424813581|ref|ZP_18238769.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Candidatus Nanosalina sp. J07AB43]
gi|339758527|gb|EGQ43782.1| archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Candidatus Nanosalina sp. J07AB43]
Length = 395
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEG------KLLM- 210
I++ + PG D PQ L+ + A++YS H V NP + + G K LM
Sbjct: 216 IQIIIGPGNHDIVRLAEPQPKLNENVLERATEYSNVHLVNNPQMVRLHGIRSKGIKNLMY 275
Query: 211 -GTSGQPVSDIAK---FSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESC 266
G S D K + P ++ L+ H+APT L D+ ++IE
Sbjct: 276 HGHSFDEQIDAIKELRENAYEEPYRVMVDLLKRRHLAPTYGSNLLSPEAEDH--LVIEEK 333
Query: 267 PDVYFTGN 274
PDV+ +G+
Sbjct: 334 PDVFVSGH 341
>gi|449267353|gb|EMC78302.1| Contactin-associated protein-like 5, partial [Columba livia]
Length = 1280
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 9 VYFTGNQSKFETKTIEIEKGKSVSVLKLSD--LNETDTEECVIIGTLFKHQQLKPNILKE 66
V F G + + T+E++KGK + L D L+ +++ V +G+L QQ +++
Sbjct: 191 VLFHGEGQRGDYITLELQKGKLSLHISLGDSNLHFSNSHTSVTLGSLLDDQQWHSVLIER 250
Query: 67 ISEELKLVPQPQHTHFVS--DSDELILEDEL--------------QRIPLHGNID--IHN 108
++++ HF + DSD L ++ EL QR HG I+ +N
Sbjct: 251 FNKQVNFTVDKHTQHFRTKGDSDHLDIDYELSFGGIPVPGKPGTFQRKNFHGCIENLYYN 310
Query: 109 QVTGVVVAIKGTP----VGNGKFKVSD 131
V + +A + P VGN F S+
Sbjct: 311 GVNIIDLAKRRKPQIYTVGNVTFSCSE 337
>gi|48477541|ref|YP_023247.1| DNA polymerase II small subunit [Picrophilus torridus DSM 9790]
gi|48430189|gb|AAT43054.1| DNA polymerase II small subunit [Picrophilus torridus DSM 9790]
Length = 466
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSGQ 215
I++ L PG D PQ P + S + H + NP+ E+ GK ++ G
Sbjct: 294 IDIFLTPGNHDNVRLAEPQ----PVFSKKISDFFNKNVHLIPNPFNIEINGKNVLIYHGM 349
Query: 216 PVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
++D+ + +N ++ +E L+ H+AP P D +IE PD++ T
Sbjct: 350 SLNDMIELVPGANYASVGSAIEELLKRRHLAPVYGGKTPIIP-SKVDYHVIEKIPDIFIT 408
Query: 273 GN 274
G+
Sbjct: 409 GH 410
>gi|315231635|ref|YP_004072071.1| Archaeal DNA polymerase II small subunit [Thermococcus barophilus
MP]
gi|315184663|gb|ADT84848.1| Archaeal DNA polymerase II small subunit [Thermococcus barophilus
MP]
Length = 677
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 138 VFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASK--YSTFHP 195
+F+ L+N +H I + + PG D A T LPQ P + E +K Y +
Sbjct: 481 IFDQYEALANLLANVPDH--ITMFIGPGNHDAARTALPQ----PEFYREYAKPLYELKNA 534
Query: 196 V--TNPYIFEMEGKLLMGTSGQPVSDIAKF----SNLSNPLDILEYTLRCGHVAPTAPDT 249
V +NP + + G+ + G+ + D+ + S+L +P++ + L+ HVAPT
Sbjct: 535 VIISNPAVINLHGRDFLIVHGRGIEDVVSYIPGKSHL-HPVEPMIELLKLRHVAPTFGGK 593
Query: 250 LACYPFYDNDPMIIESCPDVYFTGN 274
+ P D ++IE PD+ G+
Sbjct: 594 VPIAP-DPEDLLVIEEVPDLVQMGH 617
>gi|317419123|emb|CBN81160.1| Integrin beta-4 [Dicentrarchus labrax]
Length = 1904
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 96/244 (39%), Gaps = 22/244 (9%)
Query: 25 IEKGKSVSVLKLSDLNETDTEECVII-GTL----FKHQQLKPNILKEISEELKLVPQPQH 79
IE G++ + DL D ++ V + G L + Q+ P L E+ E+ L+ Q
Sbjct: 1035 IEDGRTQVTYRTRDLTAKDKKDYVTVEGDLTYGPGETQKTVPVRLLELGEKDGLLEDKQV 1094
Query: 80 THFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF 139
FV D +L R P + I +Q V+ K G F SD Y PV
Sbjct: 1095 KQFVMDLSNPRQGAKLGRYP-RTTVTIADQPEPSVMMFKK---GTQNFTTSDPTYTIPVV 1150
Query: 140 NPRTTLSNNENKYVNHSSIEVDLM-PGEFDPANT---TLPQQPLHPC-LFPEASKYSTFH 194
R S K+ + +L P +F P T + HP + PE + F
Sbjct: 1151 RTRNQDSPATVKWRTKKAQRFELSGPLKFAPGETEKNIVIDPRAHPGPIQPETIQLELFE 1210
Query: 195 PVTNPYIFEMEGKLLMGTSGQPVS-DIAKFSNLS--NPLDILEYTLRCGH-VAPTAPDTL 250
P +N + E + L+ T G P S ++A+ NP + T GH +AP P
Sbjct: 1211 PSSNASVGERKTTLVNVTEGAPRSPEVAQMQQKGYINP----KATSPGGHLIAPDNPKAK 1266
Query: 251 ACYP 254
A P
Sbjct: 1267 ATGP 1270
>gi|14325637|dbj|BAB60540.1| archaeal DNA polymerase II subunit 1 [Thermoplasma volcanium GSS1]
Length = 466
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHP----CLFPEASKYSTFHPVTNPYIFEMEGKLLMGTS 213
I V +MPG D + PQ P+ P +FP + F P NPY ++EGK ++
Sbjct: 291 ITVFIMPGNHDTVRLSEPQ-PVFPEKIRKMFPSNA---VFLP--NPYNLKLEGKNVLVYH 344
Query: 214 GQPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
G ++D+ + +N + +E L H++P P D +IE PD++
Sbjct: 345 GMSLNDMIELIPGANYDSIGKAIEAILVRRHLSPRYGGNTPLIP-SSVDYHVIEEVPDIF 403
Query: 271 FTGN 274
TG+
Sbjct: 404 ITGH 407
>gi|13542203|ref|NP_111891.1| DNA polymerase II small subunit [Thermoplasma volcanium GSS1]
Length = 464
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHP----CLFPEASKYSTFHPVTNPYIFEMEGKLLMGTS 213
I V +MPG D + PQ P+ P +FP + F P NPY ++EGK ++
Sbjct: 289 ITVFIMPGNHDTVRLSEPQ-PVFPEKIRKMFPSNA---VFLP--NPYNLKLEGKNVLVYH 342
Query: 214 GQPVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
G ++D+ + +N + +E L H++P P D +IE PD++
Sbjct: 343 GMSLNDMIELIPGANYDSIGKAIEAILVRRHLSPRYGGNTPLIP-SSVDYHVIEEVPDIF 401
Query: 271 FTGN 274
TG+
Sbjct: 402 ITGH 405
>gi|313236509|emb|CBY11823.1| unnamed protein product [Oikopleura dioica]
Length = 209
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-- 102
+ V+ G K +P IL E E+ + + +++S+ D L EDE QRI G
Sbjct: 89 QRAVVYGIFIKTITNQPEILHEYDED---KSEFEGDNYLSEGDILGFEDESQRIECSGIT 145
Query: 103 NIDIHNQVTGVVVAIKGTPVGNGKFKVSD 131
I +TG VVA+ G + +G F++ D
Sbjct: 146 AEKIRTILTGEVVAVYGRVIDSGTFEIED 174
>gi|313222642|emb|CBY41664.1| unnamed protein product [Oikopleura dioica]
Length = 233
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 45 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-- 102
+ V+ G K +P IL E E+ + + +++S+ D L EDE QRI G
Sbjct: 89 QRAVVYGIFIKTITNQPEILHEYDED---KSEFEGDNYLSEGDILGFEDESQRIECSGIT 145
Query: 103 NIDIHNQVTGVVVAIKGTPVGNGKFKVSD 131
I +TG VVA+ G + +G F++ D
Sbjct: 146 AEKIRTILTGEVVAVYGRVIDSGTFEIED 174
>gi|449506893|ref|XP_002190922.2| PREDICTED: LOW QUALITY PROTEIN: contactin-associated protein-like 5
[Taeniopygia guttata]
Length = 1290
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 9 VYFTGNQSKFETKTIEIEKGKSVSVLKLSD--LNETDTEECVIIGTLFKHQQLKPNILKE 66
V F G + + T+E++KGK L L D L+ +++ V +G+L Q +++
Sbjct: 196 VLFHGEGQRGDYITLELQKGKLSLHLNLGDSNLHFSNSHTSVTLGSLLDDQHWHSVLIER 255
Query: 67 ISEELKLVPQPQHTHFVS--DSDELILEDEL--------------QRIPLHGNID--IHN 108
++++ HF + DSD L ++ EL QR HG I+ +N
Sbjct: 256 FNKQVNFTVDKHTQHFRTKGDSDHLDIDYELSFGGIPVPGKPGTFQRKNFHGCIENLYYN 315
Query: 109 QVTGVVVAIKGTP----VGNGKFKVSD 131
V + +A + P VGN F S+
Sbjct: 316 GVNIIDLAKRRKPQIYTVGNVTFSCSE 342
>gi|374724921|gb|EHR77001.1| DNA polymerase II small subunit [uncultured marine group II
euryarchaeote]
Length = 544
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
+E ++PG D PQ + ++T V NP F + G L+ G+ +
Sbjct: 374 VECVMLPGNHDAVRPAEPQPTFEKDI---QQDFNTTTFVGNPCDFSLHGVRLLSYHGKSI 430
Query: 218 SDIA---KFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
D + ++P++ + LR H+AP P D ++I PD++ TG+
Sbjct: 431 DDFVAGLRTVTYADPVEAMRQMLRRRHLAPQWGGKTPLSP-EPEDGLVIREVPDIFVTGH 489
>gi|326922960|ref|XP_003207710.1| PREDICTED: contactin-associated protein-like 5-like [Meleagris
gallopavo]
Length = 1304
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 9 VYFTGNQSKFETKTIEIEKGKSVSVLKLSD--LNETDTEECVIIGTLFKHQQLKPNILKE 66
V F G + + T+E++KGK + L D L+ T++ + +G+L Q +++
Sbjct: 216 VLFHGEGQRGDYITLELQKGKLSLHINLGDSNLHFTNSHTSITLGSLLDDQHWHSVLIER 275
Query: 67 ISEELKLVPQPQHTHFVS--DSDELILEDEL--------------QRIPLHGNID--IHN 108
++++ HF + DSD L ++ EL QR HG I+ +N
Sbjct: 276 FNKQVNFTVDKHTQHFRTKGDSDHLDIDYELSFGGIPVPGKPGTFQRKNFHGCIENLYYN 335
Query: 109 QVTGVVVAIKGTP----VGNGKFKVSD 131
V + +A + P VGN F S+
Sbjct: 336 GVNIIDLAKRRKPQIYTVGNVTFSCSE 362
>gi|410670930|ref|YP_006923301.1| DNA-directed DNA polymerase [Methanolobus psychrophilus R15]
gi|409170058|gb|AFV23933.1| DNA-directed DNA polymerase [Methanolobus psychrophilus R15]
Length = 512
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPV 217
I + + PG D PQ L C+ + TF V NP + +++G ++ G+ +
Sbjct: 340 IRIVISPGNHDAVRQAEPQPKLPECIRADFPDNVTF--VGNPAMVDLDGARVLLYHGRSI 397
Query: 218 SD-IAKFSNLS--NPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
D +A +S P + ++ H++P ++ P D ++ PD+ G+
Sbjct: 398 DDLVAAVPGVSYHAPTKGMVEMMKFRHLSPIYGSRVSIAP-EKQDHFVLSQVPDILHCGH 456
Query: 275 QSKFETKTIEIEKDKNVRLIS 295
TI +E KNV LI+
Sbjct: 457 -----VHTIGVEWYKNVLLIN 472
>gi|358332968|dbj|GAA51555.1| peptidase inhibitor 16 [Clonorchis sinensis]
Length = 1865
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 59 LKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIK 118
L PN+ S E + +H + DS IL E + I N+D+ + G + AIK
Sbjct: 1153 LMPNLTWSDSLE----QEAKHQAEMCDSPTRILPGEARAISRVANLDLFGLIRGKLDAIK 1208
Query: 119 GT-------PVGNGKFKVSDVCYATPVFNPRTTLSNNENKYVNHSSIEVDLMPGEFDPAN 171
T G +F V VC P +N + + NKY N + +PG+ P
Sbjct: 1209 LTVRTFGYASTGKQEFTVQFVCTGQPSYNAKIAYLTDHNKYRN--MVLEGQVPGQ--PQA 1264
Query: 172 TTLP 175
T +P
Sbjct: 1265 TVMP 1268
>gi|333988605|ref|YP_004521212.1| DNA-directed DNA polymerase [Methanobacterium sp. SWAN-1]
gi|333826749|gb|AEG19411.1| DNA-directed DNA polymerase [Methanobacterium sp. SWAN-1]
Length = 500
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 156 SSIEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQ 215
+ +++ + PG D PQ L E K V+NP + +EG + G+
Sbjct: 327 NGVKIVISPGNHDACRLAEPQPALPEHYASELYKLKNTEFVSNPAVVSLEGINTLMYHGR 386
Query: 216 PVSDIAKFSN-LSNPLD--ILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
D A N +S+ I++ L H+AP + Y+ D ++IE PDV+ T
Sbjct: 387 SFDDFAMTVNGMSHEHTDLIMKELLEKRHLAPIYGERTPLASEYE-DHLVIEEIPDVFHT 445
Query: 273 GN 274
G+
Sbjct: 446 GH 447
>gi|71483066|gb|AAZ32499.1| DNA polymerase II small subunit [uncultured euryarchaeote Alv-FOS4]
Length = 466
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKY--STFHPVTNPYIFEMEGKLLMGTSGQ 215
I++ ++PG D PQ P L E K ++NP F + G M G
Sbjct: 296 IKMVIIPGNHDLVRNAEPQ----PALPREIEKMFNGNVELLSNPTTFTIHGYRFMMYHGA 351
Query: 216 PVSDIAKF---SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFT 272
++++ + + + +I++Y L H++P + + P D ++I++ PDV T
Sbjct: 352 SLNNLVELIPGMDYTKTTEIMQYMLDMRHLSPVYGEKVPIVP-TPRDYLVIDTVPDVLIT 410
Query: 273 GNQSKF 278
G+ F
Sbjct: 411 GHVHIF 416
>gi|426227006|ref|XP_004007621.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor C/D-like
[Ovis aries]
Length = 613
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 173 TLPQQPLHPCLFPEA--SKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDIAKFSNLSNPL 230
T +Q H L P A + ST+HP+ +P+I ++ KLL T + + + L
Sbjct: 462 TFFEQHTHSTLVPLALLDEVSTYHPLLHPHILQLLIKLL-ETKYPELDAMKQLEVKKTLL 520
Query: 231 DILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIE 264
D + + L CGHV P C D D +I
Sbjct: 521 DRMVHLLSCGHVLPVVAYIRRCLEKLDTDLSLIR 554
>gi|300122139|emb|CBK22713.2| unnamed protein product [Blastocystis hominis]
Length = 122
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 45 EECVIIGTLFKHQQLKPNILKE-ISEELKLVPQPQHTHFV----------SDSDELILED 93
E+C+IIGT++K L +IL E +S PQ T F+ + D +ILED
Sbjct: 30 EDCIIIGTIYKDLSLFKSILNEKVSSAFN--PQLIGTQFLPKNSLHGPLSQEGDPIILED 87
Query: 94 ELQRIPLHGNIDIHNQVTGVVVAIKG 119
RI + D VTGVV+AI+G
Sbjct: 88 STTRIMIKDFKD--PIVTGVVMAIRG 111
>gi|354609831|ref|ZP_09027787.1| DNA-directed DNA polymerase [Halobacterium sp. DL1]
gi|353194651|gb|EHB60153.1| DNA-directed DNA polymerase [Halobacterium sp. DL1]
Length = 552
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 18/145 (12%)
Query: 159 EVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPVT---NPYIFEMEGKLLMGTSGQ 215
E+ ++PG D PQ P E + H NP +EG ++ G
Sbjct: 379 EIVMIPGNHDAVRLAEPQ----PAFDEELRSIMSAHDARFTGNPSTVTVEGVNILMYHGV 434
Query: 216 PVSDI-----AKFSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVY 270
+ +I ++ + NP +E LR HVAP P + D ++++ PDV+
Sbjct: 435 SIDEIIAEHPSEDVSYDNPHRAMELLLRKRHVAPQFGGRTRLAP-EEEDYLVMDEVPDVF 493
Query: 271 FTGNQSKFETKTIEIEKDKNVRLIS 295
TG+ K T NVR+++
Sbjct: 494 HTGHVHKLGVGTY-----HNVRMVN 513
>gi|257386882|ref|YP_003176655.1| DNA-directed DNA polymerase [Halomicrobium mukohataei DSM 12286]
gi|257169189|gb|ACV46948.1| DNA-directed DNA polymerase [Halomicrobium mukohataei DSM 12286]
Length = 527
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 158 IEVDLMPGEFDPANTTLPQQPLHPCLFPEASKYSTFHPV---TNPYIFEMEGKLLMGTSG 214
IE+ ++PG D PQ P E T H +NP + +EG ++ G
Sbjct: 353 IEIRMIPGNHDAVRLAEPQ----PAFDEELRDIMTAHDAQVHSNPALVTIEGVTVLMYHG 408
Query: 215 QPVSD-IAKF----SNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDV 269
+ + IA+ ++ P + L+ HVAP P D D +++E PDV
Sbjct: 409 VSLDEVIAELPDEKASYDEPHKAMYQLLKKRHVAPQYGGHTRLAP-EDRDYLVMEEVPDV 467
Query: 270 YFTGNQSKF 278
+ TG+ K
Sbjct: 468 FHTGHVHKL 476
>gi|395644603|ref|ZP_10432463.1| metallophosphoesterase [Methanofollis liminatans DSM 4140]
gi|395441343|gb|EJG06100.1| metallophosphoesterase [Methanofollis liminatans DSM 4140]
Length = 470
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 164 PGEFDPANTTLPQQPLHPCL---FPEASKYSTFHPVTNPYIFEMEGKLLMGTSGQPVSDI 220
PG D PQ + P +P + V NP + ++G ++ G+ D+
Sbjct: 301 PGNHDVVRGAEPQPAIPPAFRIGYPANCVW-----VENPALVSLQGVRVLIYHGRSFDDM 355
Query: 221 AK---FSNLSNPLDILEYTLRCGHVAPTAPDTLACYPFYDNDPMIIESCPDVYFTGN 274
++ + P +I+E L+ H+AP P DP+II+ P+V FTG+
Sbjct: 356 IGTIPGASYNRPAEIMEEMLKRRHLAPIFGMRTPIAP-GKKDPLIIDPVPEVLFTGH 411
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,356,072,879
Number of Sequences: 23463169
Number of extensions: 234762990
Number of successful extensions: 545505
Number of sequences better than 100.0: 499
Number of HSP's better than 100.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 543331
Number of HSP's gapped (non-prelim): 1311
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)