BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8637
(216 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328715058|ref|XP_001950214.2| PREDICTED: DNA polymerase delta subunit 2-like [Acyrthosiphon
pisum]
Length = 451
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 135/191 (70%), Gaps = 8/191 (4%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS 60
+ N + + R + +Y ++S F L +Y++QFAHIYA RL +MR+ L ++ QKWG+
Sbjct: 5 VGNFDQTEFERSSFNYADMSSVFHLKDVNYTRQFAHIYAHRLVQMRDILQEKIQQKWGER 64
Query: 61 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 120
+ KLS+L++ +EC+I+GTLFKHQ+LKP+ILKEISEE L+PQP THFVSD+DE+I
Sbjct: 65 CDIYKLSELHDKIGKECIIVGTLFKHQELKPSILKEISEENNLIPQPPRTHFVSDTDEII 124
Query: 121 LEDELQRIP-----LHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP--VFKPR 172
LEDELQR+P L+GN + ++N +TG ++A+KG P GKF V D C+ TP +K
Sbjct: 125 LEDELQRVPLTFDGLNGNSLSLNNIMTGCIIAVKGIPQDGGKFDVLDFCWPTPSAAYKAL 184
Query: 173 TTLSNNENKYV 183
TT S+ +++++
Sbjct: 185 TTRSSGDDRFL 195
>gi|28279582|gb|AAH45410.1| Pold2 protein [Danio rerio]
gi|182891524|gb|AAI64684.1| Pold2 protein [Danio rerio]
Length = 467
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R Y S+ FR+ + +S+Q+AHIYA RL +MR+ L R + KWG V + KL D
Sbjct: 23 FERAEPAYSGCSERFRIGERSFSRQYAHIYATRLMQMRQILTERATHKWGTEVPIRKLCD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L EECVI+GT+FKH +L+P+IL+EISEE L+PQP ++S SDELILEDELQRI
Sbjct: 83 LQMG--EECVIVGTIFKHMELQPSILREISEEHNLLPQPPRAKYISQSDELILEDELQRI 140
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKYVNHVD 187
L GNID VTG V+AIKG +GKF V D C A P PR LS+
Sbjct: 141 KLEGNIDAPKFVTGSVIAIKGAEQNDGKFTVEDFCMADVPPQTPRQPLSS---------- 190
Query: 188 AFTDDDFIRLWEGLFFSMWMSD 209
D F+ L GL + +D
Sbjct: 191 ----DRFVLLASGLGLNGSRAD 208
>gi|47086937|ref|NP_998468.1| DNA polymerase delta subunit 2 [Danio rerio]
gi|16501182|emb|CAD10079.1| novel protein similar to human DNA directed polymerase delta 2,
regulatory subunit (50kD) (POLD2) [Danio rerio]
gi|42744580|gb|AAH66617.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
gi|213624856|gb|AAI71676.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
gi|213625950|gb|AAI71678.1| Polymerase (DNA directed), delta 2, regulatory subunit [Danio
rerio]
Length = 467
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R Y S+ FR+ + +S+Q+AHIYA RL +MR+ L R + KWG V + KL D
Sbjct: 23 FERAEPAYSGCSERFRIGERSFSRQYAHIYATRLMQMRQILTERATHKWGTEVPIRKLCD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L EECVI+GT+FKH +L+P+IL+EISEE L+PQP ++S SDELILEDELQRI
Sbjct: 83 LQMG--EECVIVGTIFKHMELQPSILREISEEHNLLPQPPRAKYISQSDELILEDELQRI 140
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKYVNHVD 187
L GNID VTG V+AIKG +GKF V D C A P PR LS+
Sbjct: 141 KLEGNIDAPKFVTGSVIAIKGAEQNDGKFTVEDFCMADVPPQTPRQPLSS---------- 190
Query: 188 AFTDDDFIRLWEGLFFSMWMSD 209
D F+ L GL + +D
Sbjct: 191 ----DRFVLLASGLGLNGSRAD 208
>gi|218505643|ref|NP_001136183.1| DNA polymerase subunit delta-2 [Salmo salar]
gi|209155382|gb|ACI33923.1| DNA polymerase subunit delta-2 [Salmo salar]
gi|223648556|gb|ACN11036.1| DNA polymerase subunit delta-2 [Salmo salar]
Length = 474
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 113/171 (66%), Gaps = 3/171 (1%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R Y S+ F+L + +++Q+AHIYA RL +M L R QKWG V + KL D
Sbjct: 30 FDRVKPAYSPCSERFKLGERSFNRQYAHIYATRLMQMSPLLTERAQQKWGADVRIRKLCD 89
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L E+C I+GTLFKH +L+P+ILKEISEE L+PQP T ++SDSDELILEDELQRI
Sbjct: 90 LQMG--EQCCIVGTLFKHMELQPSILKEISEEHNLLPQPPRTRYISDSDELILEDELQRI 147
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNN 178
L GNID+ VTG V+AI G +GKF V D C A P PRTTLS++
Sbjct: 148 KLEGNIDVDKFVTGSVIAIYGAEKNDGKFTVDDFCTADLPPQTPRTTLSSD 198
>gi|157116366|ref|XP_001658442.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108876529|gb|EAT40754.1| AAEL007541-PB [Aedes aegypti]
Length = 455
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
K + R Y N S F SKD+SKQF+HIYA RL++M + RV +KWG + +L
Sbjct: 16 KDFKRLDVAYVNKSDKFLFKSKDFSKQFSHIYASRLSEMVGLVTERVKEKWGTEHPIKQL 75
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP +H+ D+D LILED LQ
Sbjct: 76 AELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPRSHYTDDADILILEDALQ 135
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
RI L G ID+H+ VTG V A+ G G+G+F+V D +
Sbjct: 136 RIRLMGKIDVHSVVTGAVCAVLGYEDGDGRFRVEDYLF 173
>gi|157133194|ref|XP_001662794.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108870916|gb|EAT35141.1| AAEL012669-PA [Aedes aegypti]
Length = 455
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
K + R Y N S F SKD+SKQF+HIYA RL++M + RV +KWG + +L
Sbjct: 16 KDFKRLDVAYVNKSDKFLFKSKDFSKQFSHIYASRLSEMVGLVTERVKEKWGTEHPIKQL 75
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP +H+ D+D LILED LQ
Sbjct: 76 AELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPRSHYTDDADILILEDALQ 135
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
RI L G +D+H+ VTG V A+ G G+G+F+V D +
Sbjct: 136 RIRLMGKMDVHSVVTGAVCAVLGYEDGDGRFRVEDYLF 173
>gi|291238172|ref|XP_002738996.1| PREDICTED: DNA-directed DNA polymerase delta 2-like [Saccoglossus
kowalevskii]
Length = 465
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 15/193 (7%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R + YKNLS FR+ ++ +S+Q+AH+YA RL MR L +KWG ++ + KL D
Sbjct: 19 FQRQSCSYKNLSDRFRVKNRSFSRQYAHLYAERLLSMRPMLTRAAKKKWGDAIRLKKLCD 78
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L E+C +IGTLFKH LKP+ILKEISEE+ L+PQP + + +SD LILEDELQRI
Sbjct: 79 LKLG--EKCCVIGTLFKHMNLKPSILKEISEEINLMPQPVKSKYTDESDVLILEDELQRI 136
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDA 188
L G +D+H VTG++VA+ G G F+V D CYA + + +LS
Sbjct: 137 TLVGKLDVHTAVTGIIVAVYGCEKDGGLFQVDDFCYAELPEQVKPSLSK----------- 185
Query: 189 FTDDDFIRLWEGL 201
DD F+ L GL
Sbjct: 186 --DDKFVALVSGL 196
>gi|327279029|ref|XP_003224261.1| PREDICTED: DNA polymerase delta subunit 2-like [Anolis
carolinensis]
Length = 473
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 110/167 (65%), Gaps = 7/167 (4%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P + Y N SQ FRL + +++Q+AHIYA RL +MR L+ R +KWG +++V KL +L
Sbjct: 29 PASSYTNCSQNFRLGERTFNRQYAHIYATRLIQMRPLLVERARRKWGSNITVKKLCELQV 88
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK QL+P+IL+EISEE L PQP T ++ SDELILEDELQRI L
Sbjct: 89 A--EKCCVVGTLFKSMQLQPSILREISEEHNLPPQPPRTKYIHQSDELILEDELQRIKLE 146
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-----TPVFKPRT 173
GNI I VTG ++A+ G+ +GKF V D C+A P+ P T
Sbjct: 147 GNIQIDKLVTGTILAVYGSEGDDGKFLVEDHCFADMPTQLPMMGPNT 193
>gi|301605980|ref|XP_002932622.1| PREDICTED: DNA polymerase delta subunit 2-like [Xenopus (Silurana)
tropicalis]
Length = 335
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 8 SYTRPT-ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
++TR + Y N S FRL + +++Q+AHIYA RL +MR L+ R Q WG V+V KL
Sbjct: 23 TFTRVSNTQYANCSSVFRLGERTFTRQYAHIYATRLEQMRPLLIKRAKQLWGDDVAVRKL 82
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+L E+C ++GTLFK +L+P+IL+EISEE L+PQP ++SDSDELILEDELQ
Sbjct: 83 CELQ--GEEKCCVVGTLFKSMELQPSILREISEEHNLLPQPARHKYISDSDELILEDELQ 140
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYV 183
RI L G D+ VTG V+A+ G+ GKF V D C + P P LS E+++V
Sbjct: 141 RIKLEGATDVQQLVTGAVLAVLGSEGDAGKFMVEDFCLTSLPAQSPLPRLS--EDRFV 196
>gi|395850111|ref|XP_003797642.1| PREDICTED: DNA polymerase delta subunit 2 [Otolemur garnettii]
Length = 543
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L+ R Q+WG V V KL +L
Sbjct: 102 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVNRAKQQWGSGVEVKKLCELQP 161
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 162 G--EKCCVVGTLFKAMQLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 219
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVF-KPRTTLSNNE 179
G ID+ VTG V+A+ G+ +GKF V D C+A KP TL ++
Sbjct: 220 GTIDVSKLVTGTVLAVLGSVRDDGKFLVEDHCFADLALQKPMPTLDTDQ 268
>gi|157116364|ref|XP_001658441.1| DNA polymerase delta small subunit [Aedes aegypti]
gi|108876528|gb|EAT40753.1| AAEL007541-PA [Aedes aegypti]
Length = 458
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 109/161 (67%), Gaps = 3/161 (1%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
K + R Y N S F SKD+SKQF+HIYA RL++M + RV +KWG + +L
Sbjct: 16 KDFKRLDVAYVNKSDKFLFKSKDFSKQFSHIYASRLSEMVGLVTERVKEKWGTEHPIKQL 75
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
++L E E+C+IIGTLFKHQ+LKP+IL+EISEE +LVPQP +H+ D+D LILED LQ
Sbjct: 76 AELKEDSPEKCIIIGTLFKHQELKPSILREISEENQLVPQPPRSHYTDDADILILEDALQ 135
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPV---GNGKFKVSDVCY 164
RI L G ID+H+ VTG V A+ G G+G+F+V D +
Sbjct: 136 RIRLMGKIDVHSVVTGAVCAVLGVDSYEDGDGRFRVEDYLF 176
>gi|170047774|ref|XP_001851385.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
gi|167870072|gb|EDS33455.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
Length = 455
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
E + R Y+ S F +KD+ KQFAHIYA RL +M + RV KWG V
Sbjct: 15 EGGEFKRLQVPYQYRSDKFHFKTKDF-KQFAHIYATRLEEMVRLMKVRVEHKWGSKYPVK 73
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
+L+DL E + E+CV+IGTLFKHQ+LKP+IL+EISEE +L PQP +H+ D+D LILED
Sbjct: 74 QLADLKEDNPEQCVLIGTLFKHQELKPSILREISEENQLAPQPPRSHYTDDADILILEDA 133
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
LQRI L G +D+H+ VTGVV A++G G+G+F V + +
Sbjct: 134 LQRIRLFGKLDVHSVVTGVVCAVRGYEDGDGRFHVEEYLF 173
>gi|432874732|ref|XP_004072565.1| PREDICTED: DNA polymerase delta subunit 2-like [Oryzias latipes]
Length = 471
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLS 67
++ R + Y+ S +R+ + +S+Q+AHIYA RL +MR L R QKWG +V + KL
Sbjct: 26 TFERISLPYELYSDRYRVGQRSFSRQYAHIYAARLMQMRPLLAERAQQKWGSNVLIKKLC 85
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
DL E+C I+GTLFK +L+P+ILKEISEE L+PQP ++S++DELILEDELQR
Sbjct: 86 DLEPG--EQCCIVGTLFKRMELQPSILKEISEEHNLLPQPARAKYISEADELILEDELQR 143
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNN 178
I L G D VTG VVAI G +GKF V D C A P+ PR LS++
Sbjct: 144 IKLEGKFDKDKCVTGSVVAIYGAEKNDGKFTVEDFCMADLPLQTPRPALSSD 195
>gi|148233344|ref|NP_001080101.1| DNA polymerase delta subunit 2 [Xenopus laevis]
gi|13431459|sp|O93610.1|DPOD2_XENLA RecName: Full=DNA polymerase delta subunit 2; AltName: Full=XlCdc1
gi|3718033|emb|CAA09373.1| XlCdc1 [Xenopus laevis]
gi|28703913|gb|AAH47262.1| Pold2-prov protein [Xenopus laevis]
Length = 463
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 8 SYTRPT-ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
++TR + Y N S FRL + +++Q+AHIYA RL +MR L+ Q+WG ++V KL
Sbjct: 23 TFTRVSNTQYSNCSSIFRLGERTFTRQYAHIYATRLEQMRPLLIKSAKQRWGDDIAVRKL 82
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+L E+C +IGTLFK +L+P+IL+EISEE L+PQP ++SDSDELILEDELQ
Sbjct: 83 CELQ--GGEKCCVIGTLFKSMELQPSILREISEEHNLLPQPARQKYISDSDELILEDELQ 140
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYV 183
RI L G D+ VTG V+A+ G GKF V D C + PV P LS E+++V
Sbjct: 141 RIKLEGATDVQQLVTGAVLAVLGAEEDAGKFVVEDFCLTSLPVQSPLPRLS--EDRFV 196
>gi|312378279|gb|EFR24900.1| hypothetical protein AND_10208 [Anopheles darlingi]
Length = 453
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLS 67
++ R +Y S+ F S+D+SKQF+ IY+ RL++M + RV +KWGK + + +L+
Sbjct: 15 NFERLKVEYVYRSEKFHFQSRDFSKQFSFIYSSRLDEMVPLISGRVVEKWGKEMPIKRLA 74
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
DL E ++CVIIGTLFKHQ+LKP+IL+EISEE +L PQP +H+ D D LILED LQR
Sbjct: 75 DLREECPQKCVIIGTLFKHQELKPSILREISEENQLAPQPPRSHYTDDKDILILEDALQR 134
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSD-VCYATPVFKPRTTLSNN 178
I L GNID+H+ VTGVV A+ G +G+F V D + Y KP +L N+
Sbjct: 135 IRLVGNIDVHSVVTGVVCALLGYQESDGRFFVEDYLFYEGGPQKPLKSLENS 186
>gi|126303407|ref|XP_001379694.1| PREDICTED: DNA polymerase delta subunit 2-like [Monodelphis
domestica]
Length = 471
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 3 NIECKSYTR-PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
+ E ++ R P Y N SQ FRL + +S+Q+AHIYA RL M L+ R Q+W V
Sbjct: 18 STESSTFARVPVTTYTNSSQPFRLGERSFSRQYAHIYATRLIHMTPLLVKRARQRWSSEV 77
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
SV KL +L E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++ DELIL
Sbjct: 78 SVRKLCELQPG--EKCCVVGTLFKSMQLQPSILREISEEHNLLPQPPRSKYIHPDDELIL 135
Query: 122 EDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRT 173
EDELQRI L G ID+ VTG+V+A+ G+ +GKF V D C+A P KP T
Sbjct: 136 EDELQRIKLEGTIDVSKLVTGIVLAVLGSVQDDGKFLVEDHCFADLPPQKPMT 188
>gi|54262198|ref|NP_001005794.1| DNA-directed DNA polymerase delta 2 [Xenopus (Silurana) tropicalis]
gi|49522345|gb|AAH75341.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[Xenopus (Silurana) tropicalis]
gi|89272894|emb|CAJ83206.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[Xenopus (Silurana) tropicalis]
Length = 463
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 8 SYTRPT-ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
++TR + Y N S FRL + +++Q+AHIYA RL +MR L+ R Q WG V+V KL
Sbjct: 23 TFTRVSNTQYANCSSVFRLGERTFTRQYAHIYATRLEQMRPLLIKRAKQLWGDDVAVRKL 82
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+L E+C ++GTLFK +L+P+IL+EISEE L+PQP ++SDSDELILEDELQ
Sbjct: 83 CELQ--GEEKCCVVGTLFKSMELQPSILREISEEHNLLPQPARHKYISDSDELILEDELQ 140
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYV 183
RI L G D+ VTG V+A+ G+ GKF V D C + P P LS E+++V
Sbjct: 141 RIKLEGATDVQQLVTGAVLAVLGSEGDAGKFMVEDFCLTSLPAQSPLPRLS--EDRFV 196
>gi|432092626|gb|ELK25161.1| DNA polymerase delta subunit 2 [Myotis davidii]
Length = 469
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q+WG V V KL +L
Sbjct: 28 PVATYTNCSQPFRLGERSFSRQYAHIYATRLLQMRPFLVSRAQQQWGSGVLVRKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 A--EQCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIRLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSRLVTGTVLAVLGSVRDDGKFLVEDHCFA 179
>gi|148708618|gb|EDL40565.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_c [Mus musculus]
Length = 367
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|226423863|ref|NP_032920.2| DNA polymerase delta subunit 2 [Mus musculus]
gi|341940459|sp|O35654.2|DPOD2_MOUSE RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|13097135|gb|AAH03342.1| Polymerase (DNA directed), delta 2, regulatory subunit [Mus
musculus]
gi|148708616|gb|EDL40563.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_a [Mus musculus]
Length = 469
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|194209519|ref|XP_001915605.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta subunit 2-like
[Equus caballus]
Length = 469
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + + +Q+AHIYA RL +MR L++R Q+WG V + KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFGRQYAHIYATRLIQMRPFLVSRAQQRWGSGVQIKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSVRDDGKFQVEDHCFA 179
>gi|395506992|ref|XP_003757812.1| PREDICTED: DNA polymerase delta subunit 2 [Sarcophilus harrisii]
Length = 537
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 3 NIECKSYTR-PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
+ E ++ R P Y N SQ FRL + +S+Q+AHIYA RL M L+ R Q+W V
Sbjct: 84 SAESSTFARVPVTTYTNSSQPFRLGERSFSRQYAHIYATRLIHMTPLLVNRARQRWSSEV 143
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
SV KL +L E+C ++GTLFK QL+P+IL+EISEE L+PQP + ++ DELIL
Sbjct: 144 SVKKLCELQPG--EKCCVVGTLFKSMQLQPSILREISEEHNLLPQPPRSKYIHPDDELIL 201
Query: 122 EDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRT 173
EDELQRI L G ID+ VTG+V+A+ G+ +GKF V D C+A P KP T
Sbjct: 202 EDELQRIRLEGTIDVSRLVTGIVLAVLGSVQDDGKFLVEDHCFADLPPQKPMT 254
>gi|291394901|ref|XP_002713893.1| PREDICTED: DNA-directed DNA polymerase delta 2 [Oryctolagus
cuniculus]
Length = 469
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL +++++Q+AHIYA RL++MR L++R Q+WG V KL +L
Sbjct: 28 PVATYTNASQPFRLGERNFNRQYAHIYATRLSQMRPFLVSRARQRWGSGTEVKKLCELQS 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + +V D+L+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYVHPDDQLVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSVKDDGKFLVEDHCFA 179
>gi|2398725|emb|CAA96567.1| DNA polymerase delta small subunit [Mus musculus]
Length = 469
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L+ R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVTRAQQHWGSRVEVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE LVPQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAKDDGRFQVEDHCFA 179
>gi|417401440|gb|JAA47606.1| Putative dna polymerase delta regulatory subunit 55 [Desmodus
rotundus]
Length = 467
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L+ R Q+WG +V V KL +L
Sbjct: 28 PVATYTNASQPFRLGERSFSRQYAHIYATRLIQMRPFLVTRAQQQWGAAVRVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIRLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAMLGAVGDDGKFLVEDHCFA 179
>gi|149047648|gb|EDM00318.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_c [Rattus norvegicus]
Length = 369
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQHWGSQVEVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVKDDGKFQVEDHCFA 179
>gi|61556801|ref|NP_001013068.1| DNA polymerase delta subunit 2 [Rattus norvegicus]
gi|81884493|sp|Q6AXY4.1|DPOD2_RAT RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|50926203|gb|AAH79267.1| Polymerase (DNA directed), delta 2, regulatory subunit [Rattus
norvegicus]
gi|149047646|gb|EDM00316.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_a [Rattus norvegicus]
Length = 469
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQHWGSQVEVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVKDDGKFQVEDHCFA 179
>gi|354485255|ref|XP_003504799.1| PREDICTED: DNA polymerase delta subunit 2-like [Cricetulus griseus]
Length = 469
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L +R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLESRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGRFQVEDHCFA 179
>gi|149557343|ref|XP_001520117.1| PREDICTED: DNA polymerase delta subunit 2-like [Ornithorhynchus
anatinus]
Length = 471
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL M L+ R Q+WG V+V KL +L
Sbjct: 28 PVTTYTNSSQPFRLGERSFSRQYAHIYATRLIHMTPLLVNRARQRWGSGVNVRKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
EEC ++GTL+K QL+P+IL+EISEE L+PQP T ++ DELILEDELQRI L
Sbjct: 88 G--EECCVVGTLYKAMQLQPSILREISEEHNLLPQPTRTKYLHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A++G+ +GKF V + C+A
Sbjct: 146 GTIDVSRLVTGTVLAVRGSVKDDGKFLVEEHCFA 179
>gi|344252518|gb|EGW08622.1| DNA polymerase delta subunit 2 [Cricetulus griseus]
Length = 487
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L +R Q WG V V KL +L
Sbjct: 46 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLESRAQQHWGSGVGVKKLCELQP 105
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 106 G--EQCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLK 163
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +G+F+V D C+A
Sbjct: 164 GTIDVSKLVTGTVLAVFGSVRDDGRFQVEDHCFA 197
>gi|348516100|ref|XP_003445577.1| PREDICTED: DNA polymerase delta subunit 2 [Oreochromis niloticus]
Length = 471
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 115/205 (56%), Gaps = 17/205 (8%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R + Y S+ +R+ + +S+Q+AHIYA RL +MR L R QKWG V + KL D
Sbjct: 27 FERTSLAYSQCSERYRVGERSFSRQYAHIYAARLMQMRPLLSERAQQKWGSDVVIKKLCD 86
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L E+C I+GTLFK L+P+ILKEISEE L+PQP ++ +SDELILEDELQRI
Sbjct: 87 LETA--EQCCIVGTLFKRMDLQPSILKEISEEHNLLPQPARAKYIHESDELILEDELQRI 144
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKYVNHVD 187
L G ID VTG V+A+ G +GKF V D C A P+ K R L +
Sbjct: 145 KLEGKIDKDKCVTGSVIAVYGAERNDGKFTVEDFCTADLPLQKARPPLDS---------- 194
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPL 212
D F+ L GL +D L
Sbjct: 195 ----DRFVLLASGLGLGSTHADSML 215
>gi|164450483|ref|NP_776853.2| DNA polymerase delta subunit 2 [Bos taurus]
gi|109940074|sp|P49004.2|DPOD2_BOVIN RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|88758648|gb|AAI13316.1| Polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Bos
taurus]
gi|296488357|tpg|DAA30470.1| TPA: DNA polymerase delta subunit 2 [Bos taurus]
Length = 469
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q+WG V V KL +L
Sbjct: 28 PVVTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQRWGSGVLVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|355712614|gb|AES04407.1| polymerase , delta 2, regulatory subunit 50kDa [Mustela putorius
furo]
Length = 382
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P + Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q+WG V V KL +L
Sbjct: 28 PVSSYTNSSQPFRLGERSFSRQYAHIYATRLLQMRPFLVSRAKQRWGGGVQVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIRLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G++D VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GDVDASRLVTGTVLAVLGSARDSGKFVVEDHCFA 179
>gi|440903070|gb|ELR53777.1| DNA polymerase delta subunit 2 [Bos grunniens mutus]
Length = 469
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q+WG V V KL +L
Sbjct: 28 PVVTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQRWGSGVLVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSVGDDGKFLVEDHCFA 179
>gi|260824487|ref|XP_002607199.1| hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae]
gi|229292545|gb|EEN63209.1| hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae]
Length = 449
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
E Y R Y+NLSQ F L +++ +Q+AHIYAVRL +M++ L +KWG V
Sbjct: 8 EFAQYERAQCSYENLSQRFMLKQRNFGRQYAHIYAVRLWEMKDRLKKAAKRKWG--VDAK 65
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
KLS++ +T CV+IGTLFKH +LKP+ILKEISEE +PQP + D+D LILEDE
Sbjct: 66 KLSEMETGET--CVVIGTLFKHMELKPSILKEISEEEGAMPQPPRAKYTEDADNLILEDE 123
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
+QR+ L G +D+ + VTG +VA+ G +GKF+V D CY
Sbjct: 124 VQRVSLAGKLDVQSSVTGTIVAVYGAEDESGKFQVKDFCY 163
>gi|332239430|ref|XP_003268906.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Nomascus
leucogenys]
gi|441650322|ref|XP_004091010.1| PREDICTED: DNA polymerase delta subunit 2 [Nomascus leucogenys]
Length = 469
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|343960915|dbj|BAK62047.1| DNA polymerase subunit delta 2 [Pan troglodytes]
Length = 469
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|350535889|ref|NP_001233397.1| DNA polymerase delta subunit 2 [Pan troglodytes]
gi|343958416|dbj|BAK63063.1| DNA polymerase subunit delta 2 [Pan troglodytes]
Length = 469
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|397467135|ref|XP_003805282.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Pan paniscus]
Length = 504
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 63 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 122
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 123 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 180
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 181 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|397467137|ref|XP_003805283.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Pan paniscus]
Length = 469
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|426356079|ref|XP_004045419.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 469
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|158299560|ref|XP_319657.4| AGAP008910-PA [Anopheles gambiae str. PEST]
gi|157013576|gb|EAA14861.4| AGAP008910-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 108/163 (66%), Gaps = 3/163 (1%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
E ++ R Y S+C+ A KD+SKQFA IYA RL +M + L V +KWG + +
Sbjct: 15 EGGAFERLKVPYTYRSECYHFAKKDFSKQFAFIYASRLEEMLKLLEDSVQKKWGTEMPIK 74
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
+L+DL E +CVIIGTLFKHQ+LKP+IL+EISEE +L PQP +H+ +D+D LILED
Sbjct: 75 RLADLREDCPHKCVIIGTLFKHQELKPSILREISEENQLAPQPPRSHYTNDNDILILEDA 134
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGT---PVGNGKFKVSDVCY 164
LQRI L G ID+H+ VTGVV A+ G +G+F V D +
Sbjct: 135 LQRIKLVGKIDVHSIVTGVVCAVMGKFWYEESDGRFFVEDYIF 177
>gi|426356077|ref|XP_004045418.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 504
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 63 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 122
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 123 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 180
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 181 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|449488069|ref|XP_002196136.2| PREDICTED: DNA polymerase delta subunit 2 [Taeniopygia guttata]
Length = 468
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 14 ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD 73
+ Y + SQ F+L + +++Q+AHIYAVRL MR L R +WG V + +LS+L E
Sbjct: 30 SGYSDCSQPFQLGERSFARQYAHIYAVRLAGMRPGLERRARSRWGNDVVLRRLSELQEG- 88
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
E+C ++GTLFK QL+P+IL+EISEE LVPQP ++ SDELILEDELQRI L G
Sbjct: 89 -EKCCVVGTLFKSMQLQPSILQEISEEHNLVPQPPLPKYIQPSDELILEDELQRIKLEGA 147
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
ID+ VTG +VA+ G NG+F V D C+A
Sbjct: 148 IDVQRLVTGTIVAVYGCEQDNGRFLVEDHCFA 179
>gi|1008460|gb|AAC48475.1| DNA polymerase delta small subunit [Bos taurus]
Length = 469
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA R +MR L++R Q+WG V V KL +L
Sbjct: 28 PVVTYTNSSQPFRLGERTFSRQYAHIYATRFIQMRPFLVSRAQQRWGSGVLVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|189055337|dbj|BAG35221.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|187828568|ref|NP_001120690.1| DNA polymerase delta subunit 2 isoform 1 [Homo sapiens]
gi|379056383|ref|NP_001243808.1| DNA polymerase delta subunit 2 isoform 1 [Homo sapiens]
gi|1352307|sp|P49005.1|DPOD2_HUMAN RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA
polymerase delta subunit p50
gi|1008458|gb|AAC50216.1| DNA polymerase delta small subunit [Homo sapiens]
gi|9963918|gb|AAG09763.1| DNA polymerase delta small subunit [Homo sapiens]
gi|12653379|gb|AAH00459.1| Polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|21430983|gb|AAM51148.1| polymerase (DNA directed), delta 2, regulatory subunit (50kD) [Homo
sapiens]
gi|51094511|gb|EAL23767.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|119581522|gb|EAW61118.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Homo
sapiens]
gi|123982305|gb|ABM82925.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
gi|123997027|gb|ABM86115.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
gi|158258126|dbj|BAF85036.1| unnamed protein product [Homo sapiens]
gi|208965368|dbj|BAG72698.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa
[synthetic construct]
Length = 469
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|218681781|pdb|3E0J|A Chain A, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681783|pdb|3E0J|C Chain C, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681785|pdb|3E0J|E Chain E, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
gi|218681787|pdb|3E0J|G Chain G, X-Ray Structure Of The Complex Of Regulatory Subunits Of
Human Dna Polymerase Delta
Length = 476
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 35 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 94
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 95 E--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 152
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 153 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 186
>gi|379056381|ref|NP_006221.2| DNA polymerase delta subunit 2 isoform 2 [Homo sapiens]
Length = 504
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 63 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 122
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 123 E--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 180
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 181 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|426227871|ref|XP_004008038.1| PREDICTED: DNA polymerase delta subunit 2 [Ovis aries]
Length = 469
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVVTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQCWGSGVLVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFA 179
>gi|348560136|ref|XP_003465870.1| PREDICTED: DNA polymerase delta subunit 2-like [Cavia porcellus]
Length = 469
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 107/159 (67%), Gaps = 3/159 (1%)
Query: 8 SYTR-PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
++TR P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q+WG V + KL
Sbjct: 23 TFTRVPVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQQWGSGVPLKKL 82
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+L E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQ
Sbjct: 83 CELQPG--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQ 140
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
RI L G ID+ VTG V+A+ G +GKF V D C+A
Sbjct: 141 RIKLKGAIDVSRLVTGTVLAVCGFVQDDGKFLVEDHCFA 179
>gi|301777308|ref|XP_002924069.1| PREDICTED: DNA polymerase delta subunit 2-like [Ailuropoda
melanoleuca]
gi|281340684|gb|EFB16268.1| hypothetical protein PANDA_013317 [Ailuropoda melanoleuca]
Length = 469
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P + Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVSTYTNSSQPFRLGERSFSRQYAHIYATRLLQMRPFLVSRAKQHWGGGVQVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G+ID VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GSIDSSKLVTGTVLAVLGSARDSGKFLVEDHCFA 179
>gi|350529379|ref|NP_001231925.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Sus
scrofa]
Length = 471
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q+WG V V KL +L
Sbjct: 30 PVVTYTNSSQPFRLGERSFNRQYAHIYATRLVQMRPFLVSRARQRWGGGVVVKKLCELQP 89
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DELILEDELQRI L
Sbjct: 90 G--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLE 147
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 148 GAIDVSKLVTGTVLALLGSAGDDGKFLVEDHCFA 181
>gi|351706194|gb|EHB09113.1| DNA polymerase delta subunit 2 [Heterocephalus glaber]
Length = 469
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L+++ Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSQARQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G IDI VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDISKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|380798219|gb|AFE70985.1| DNA polymerase delta subunit 2, partial [Macaca mulatta]
Length = 468
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 27 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 86
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 87 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 144
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 145 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 178
>gi|388453065|ref|NP_001253222.1| DNA polymerase delta subunit 2 [Macaca mulatta]
gi|67970282|dbj|BAE01484.1| unnamed protein product [Macaca fascicularis]
gi|355560661|gb|EHH17347.1| DNA polymerase delta subunit 2 [Macaca mulatta]
gi|355747662|gb|EHH52159.1| DNA polymerase delta subunit 2 [Macaca fascicularis]
gi|383414205|gb|AFH30316.1| DNA polymerase delta subunit 2 [Macaca mulatta]
Length = 469
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|297680544|ref|XP_002818049.1| PREDICTED: DNA polymerase delta subunit 2 isoform 4 [Pongo abelii]
Length = 469
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 179
>gi|297680540|ref|XP_002818047.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Pongo abelii]
Length = 504
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 63 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 122
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 123 E--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 180
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 181 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 214
>gi|410951892|ref|XP_003982626.1| PREDICTED: DNA polymerase delta subunit 2 [Felis catus]
Length = 469
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P + Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q WG V + KL +L
Sbjct: 28 PVSMYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAKQHWGAGVQIKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ GKF V D C+A
Sbjct: 146 GTIDVCKLVTGTVLAVLGSVRDTGKFLVEDHCFA 179
>gi|431909930|gb|ELK13026.1| DNA polymerase delta subunit 2 [Pteropus alecto]
Length = 469
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +S+Q+AHIY RL +MR L +R Q WG V + KL +L
Sbjct: 28 PVATYTNCSQPFRLGERSFSQQYAHIYTARLVQMRPFLASRAQQHWGSGVPIKKLFELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREVSEEHCLLPQPPRSKYIHPDDELVLEDELQRIRLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVLGSVRDDGKFAVEDRCFA 179
>gi|74010360|ref|XP_539802.2| PREDICTED: DNA polymerase delta subunit 2 [Canis lupus familiaris]
Length = 469
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P + Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q WG + + KL +L
Sbjct: 28 PVSTYTNSSQSFRLGERSFSRQYAHIYATRLLQMRPFLVSRAQQHWGDGIQIKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ D+L+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDQLVLEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G+ID VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GSIDASKLVTGTVLAVLGSVRDSGKFLVEDHCFA 179
>gi|402863616|ref|XP_003896103.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Papio anubis]
Length = 469
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 28 PVVTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 88 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 146 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|402863614|ref|XP_003896102.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Papio anubis]
Length = 504
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L R Q WG V V KL +L
Sbjct: 63 PVVTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP 122
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 123 G--EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLK 180
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 181 GTIDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 214
>gi|296209176|ref|XP_002751421.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Callithrix
jacchus]
Length = 469
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Query: 14 ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD 73
A Y N SQ FRL + +++Q+AHIYA RL +MR L R Q+WG V V KL +L
Sbjct: 30 ATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLENRAQQRWGSGVGVKKLCELQPG- 88
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L G
Sbjct: 89 -EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPSRSKYIHPDDELVLEDELQRIKLKGT 147
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 148 IDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|390343504|ref|XP_782368.2| PREDICTED: DNA polymerase delta subunit 2-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+++ R + DY+NLS F+L ++Y +Q+AH+Y+ RL MR L +KWG+ + L
Sbjct: 10 ETFQRLSCDYENLSSRFKLQDRNYQRQYAHLYSERLISMRPGLEKAARRKWGEDAPLCHL 69
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
L E+ +++GTLFK +LKP+ILKEISE+ L PQP F SDSD L+LEDELQ
Sbjct: 70 YQL--VSGEKQIVVGTLFKSMELKPSILKEISEDRNLTPQPVRERFFSDSDFLVLEDELQ 127
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
R+ L GNID+ +TG V+A+KG NGKF+V D CY
Sbjct: 128 RVVLTGNIDVQTAITGTVIAVKGFENDNGKFEVEDSCY 165
>gi|321479225|gb|EFX90181.1| hypothetical protein DAPPUDRAFT_299981 [Daphnia pulex]
Length = 444
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
Query: 4 IECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSV 63
+E Y R DY++LS F+L ++D+++Q+A IYAVRL K R L RV +KWGK +
Sbjct: 1 MEAVRYERKELDYEDLSSTFKLVNRDFNRQYAGIYAVRLTKFRTLLEERVEKKWGKQYPI 60
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED 123
KL DL E+ + GT++K Q+LKP+IL+E+S+E +++P P +VS +D LILED
Sbjct: 61 KKLVDL--VPNEKVFVFGTIYKQQELKPSILREVSDEHQVLPLPPKARYVSGTDILILED 118
Query: 124 ELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKY 182
ELQRI L GN ++ VTGVV+A+ G +GKF V D+C A PV + + ++
Sbjct: 119 ELQRILLVGNTNVGEFVTGVVIALLGHEDDSGKFIVEDICPADMPVVVNSPKIDFSTPRF 178
Query: 183 VNHVDAF----TDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + +D ++ + E +F M + P +Q+
Sbjct: 179 IALISGLDLGSGNDSYLLMQEMIFTLMGKTGTPEVQE 215
>gi|403278466|ref|XP_003930826.1| PREDICTED: DNA polymerase delta subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403278468|ref|XP_003930827.1| PREDICTED: DNA polymerase delta subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 469
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Query: 14 ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD 73
A Y N SQ FRL + +++Q+AHIYA RL +MR L R ++WG V V KL +L
Sbjct: 30 ATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLENRAQERWGSGVEVKKLCELQPG- 88
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
E+C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L G
Sbjct: 89 -EKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGT 147
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 148 IDVSKLVTGTVLAVFGSVRDDGKFLVEDHCFA 179
>gi|410928120|ref|XP_003977449.1| PREDICTED: DNA polymerase delta subunit 2-like [Takifugu rubripes]
Length = 471
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 115/205 (56%), Gaps = 17/205 (8%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R ++ Y S+ + + + +S+Q+AHIYA RL +M+ L QKWG V + KL D
Sbjct: 27 FERTSSRYCPRSERYTVGERSFSRQYAHIYAARLMQMKPLLSEAAQQKWGAEVPIKKLCD 86
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L E+C I+GTLFK +L+P+ILKEIS+EL L+PQP ++S++D+LILEDELQRI
Sbjct: 87 LQAG--EQCCIVGTLFKGMELQPSILKEISDELNLLPQPARVKYISETDKLILEDELQRI 144
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYVNHVD 187
L G ID VTG V+A+ G +G F V D C A P PR LS
Sbjct: 145 KLEGKIDRDKCVTGSVIAVYGAEKNDGIFTVEDFCTADFPAQTPRPALSC---------- 194
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPL 212
D F+ L GL +D L
Sbjct: 195 ----DTFVLLASGLGLGSSRADSML 215
>gi|47212927|emb|CAF90299.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 115/205 (56%), Gaps = 17/205 (8%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R ++ Y S+ + + + +S+Q+AHIYA RL +MR QKWG V V KL D
Sbjct: 27 FKRTSSTYHLRSERYSVGERSFSRQYAHIYAARLMQMRPLFSETARQKWGSDVPVKKLCD 86
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L ET E C I+GTLFK L+P+ILKEIS+E L+PQP ++S++D LILEDELQRI
Sbjct: 87 L-ETG-ERCCIVGTLFKSMDLQPSILKEISDEHNLLPQPARAKYISETDNLILEDELQRI 144
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYVNHVD 187
L G ID VTG V+AI G+ +GKF V D C A P+ PR LS
Sbjct: 145 KLGGKIDKDKCVTGSVIAIYGSERNDGKFTVEDFCLAGFPLQTPRPALSC---------- 194
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPL 212
D F+ L GL +D L
Sbjct: 195 ----DRFVLLASGLGLGSSHADSML 215
>gi|444517803|gb|ELV11799.1| DNA polymerase delta subunit 2 [Tupaia chinensis]
Length = 469
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +++Q+AHIYA RL +MR L+ R Q WG ++ V KL +L
Sbjct: 28 PVTTYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVHRAQQHWGSAIGVKKLCELQP 87
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
E C ++GTLFK L+P+IL+EISEE L+PQP + ++ DEL+LEDELQRI L+
Sbjct: 88 G--ERCCVVGTLFKAMPLQPSILREISEEHSLLPQPPRSKYIHPDDELVLEDELQRIKLN 145
Query: 132 GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G I++ VTG V+A+ G+ +G+F V D C A
Sbjct: 146 GTINVSLLVTGTVLAVLGSVGDDGRFLVEDHCLA 179
>gi|443695395|gb|ELT96314.1| hypothetical protein CAPTEDRAFT_168965 [Capitella teleta]
Length = 469
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 111/181 (61%), Gaps = 5/181 (2%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
E +++ R ADY+NLS+ F + + +Q+AHIYA RL R L +KWG S +
Sbjct: 20 EPETFNRLEADYENLSRKFLTKERTFQRQYAHIYAARLWTQRPGLEKVAKEKWGDSAPIR 79
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
KL DL +T CV+IGTLFKH LKP+ILKEISE+ L+P P + +SD LILEDE
Sbjct: 80 KLCDLQTGET--CVVIGTLFKHMDLKPSILKEISEDHSLMPLPPRAKYTDESDSLILEDE 137
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKG-TPVGN-GKFKVSDVCYATPVFKPRTTLSNNENKY 182
LQRI L G+ID+ VTG +VA+ G P N GKF V + + +P LS N +KY
Sbjct: 138 LQRIVLQGDIDVQALVTGALVAVYGEEPDDNRGKFNVKEFSFPPLPCQPERPLSGN-DKY 196
Query: 183 V 183
+
Sbjct: 197 I 197
>gi|241169598|ref|XP_002410434.1| DNA polymerase delta small subunit, putative [Ixodes scapularis]
gi|215494812|gb|EEC04453.1| DNA polymerase delta small subunit, putative [Ixodes scapularis]
Length = 416
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS-VSVLKLS 67
+TRP+ DY + S F L + +++Q+A Y R M L R QKWGK V V L
Sbjct: 16 FTRPSCDYLDRSDNFLLNDRTFNRQYASFYCARYKSMLPVLRQRAEQKWGKQKVQVTSLG 75
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
DL E + V++GTLFK +L+P+ILKEISEE + PQP+ TH +SD L+LED+ QR
Sbjct: 76 DLVED--KRSVVVGTLFKVMELQPSILKEISEEHHVAPQPRRTHLTDNSDSLVLEDDRQR 133
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFK-PRTTLSNNE 179
+PL GNID+ VTG+ VA+ G +G+F V D+CYA + + PR +L ++
Sbjct: 134 LPLSGNIDVAAHVTGIPVAVLGRVGDDGRFAVEDICYAGLLKQVPRPSLEADK 186
>gi|344293820|ref|XP_003418618.1| PREDICTED: DNA polymerase delta subunit 2-like [Loxodonta africana]
Length = 460
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P Y N SQ FRL + +S+Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVVAYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQHWGSGVRVRKLCELQ- 86
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
EEC ++GTLFK QL+P+IL+E+SEE L+PQP + ++ DEL+LEDELQRI L
Sbjct: 87 -PGEECCVVGTLFKAMQLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLE 145
Query: 132 GNIDIHNQVTGVVVAIKGT 150
G I++ VTG V+A+ G+
Sbjct: 146 GTIEVQKLVTGTVLAVLGS 164
>gi|346471337|gb|AEO35513.1| hypothetical protein [Amblyomma maculatum]
Length = 444
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK-SVSVLKLS 67
YTRP + ++S+ F L + +S+Q+A Y R N MR L R +KWGK + L
Sbjct: 14 YTRPECAFCDMSERFTLPERTFSRQYASFYCARYNAMRSILEGRAKEKWGKLKAPITSLC 73
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
+L E + +++GTLFK +L+P+ILKEISEE + PQPQ +HF ++D L+LED+ QR
Sbjct: 74 ELVED--KRSIVVGTLFKIMELQPSILKEISEEHHVAPQPQRSHFTDNADSLVLEDDKQR 131
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
+ L GNID+H VTGV VA+ G +G+F V + CYA
Sbjct: 132 LALAGNIDVHAHVTGVPVAVLGQVGTDGRFTVEEFCYA 169
>gi|357626913|gb|EHJ76811.1| DNA polymerase delta small subunit [Danaus plexippus]
Length = 439
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 2 KNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
K E R + Y + S F S+D+SKQ+AHIY+ RLN R L V++K+
Sbjct: 12 KQFEVVDVDRHSVQYADGSSRFYKVSRDFSKQYAHIYSARLNIFRNILAPVVNKKYSNKY 71
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
+LKL DL + T C+IIGTLFK Q+LKP+ILKE+S++L+++PQP THFV ++D L+L
Sbjct: 72 KILKLCDLRDKGTP-CIIIGTLFKLQELKPSILKELSDQLEILPQPTRTHFVHETDSLVL 130
Query: 122 EDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNN 178
EDELQRI L G+ ID++ VTGVVVAI G+ +G F V DVC+A V KP TL+N+
Sbjct: 131 EDELQRIKLSGDCIDVNKVVTGVVVAILGSEDEDGIFTVKDVCWAGCNVQKPLPTLNND 189
>gi|405975321|gb|EKC39895.1| DNA polymerase delta subunit 2 [Crassostrea gigas]
Length = 462
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
K+ R + ++ + S F L K +S+Q+AH+YA RL ++R + A +KWGK + + KL
Sbjct: 22 KTCERQSGNFSDCSDRFLLKDKTFSRQYAHLYAERLWEVRPKVEASARKKWGKDIVIRKL 81
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+L +T CV+IGTLFKH +LKP+IL+EISEE L+PQP T +V +SD+L LEDELQ
Sbjct: 82 HELKSDET--CVVIGTLFKHMELKPSILQEISEEHNLMPQPVRTKYVDESDKLYLEDELQ 139
Query: 127 RIPLHGNIDIHNQVTGVVVAIKGTPVGN--GKFKVSDVCY 164
RI L G++D+ VTGV++A+ G + GKF V C+
Sbjct: 140 RIILMGDLDVQTSVTGVIIAVYGKEPEDDQGKFHVEKYCF 179
>gi|195011536|ref|XP_001983197.1| GH15719 [Drosophila grimshawi]
gi|193896679|gb|EDV95545.1| GH15719 [Drosophila grimshawi]
Length = 435
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 13/210 (6%)
Query: 2 KNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
K +EC Y+NLS CF L + DY KQF H+Y RL +MR L KW V
Sbjct: 3 KRLECP--------YENLSSCFLLQTSDYQKQFCHLYTHRLAEMRRLLTPLAKSKWDNQV 54
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
++KL +L C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++ D++IL
Sbjct: 55 PIMKLCELRGEQNVNCIIIGTIYKHQAHKPSILRDISEENQLAPQPQRKNYSEPEDKVIL 114
Query: 122 EDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNEN 180
EDELQR+ L G+I D N TG+V A+KG +G V +V + + L +N
Sbjct: 115 EDELQRVRLQGDILDGRNLATGIVCAVKGGTDSDGYLNVEEVLFLESGPQKSLALRSNAG 174
Query: 181 KYV--NHVDAFTDDDFIRLWEGLFFSMWMS 208
K V + +D +++ F W+S
Sbjct: 175 KLVIISGLDQLQSHNYVDALN--MFQYWLS 202
>gi|198433881|ref|XP_002126992.1| PREDICTED: similar to XlCdc1 [Ciona intestinalis]
Length = 461
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+TR + + +NLS+ F + ++ Y +Q+AHIY VR MR ++ +KWG V + KLS+
Sbjct: 14 HTRQSCERENLSKRFTVINEPYERQYAHIYFVRSEIMRPKVIQAAQRKWGDGVKINKLSE 73
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
+ E E+C I+GTLFK +L+P+ILKEISEE+ + QP+ F+SD D+LILED +QRI
Sbjct: 74 IEEG--EKCCIVGTLFKQMELQPSILKEISEEVHVQIQPERKRFISDDDKLILEDTMQRI 131
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNEN 180
L GNI + TG VVA+ G +G F V D YA P P L N+N
Sbjct: 132 SLTGNISAGDCFTGTVVALLGKETKSGHFNVEDFTYAGLPSQIPAPDLVGNDN 184
>gi|156375394|ref|XP_001630066.1| predicted protein [Nematostella vectensis]
gi|156217079|gb|EDO38003.1| predicted protein [Nematostella vectensis]
Length = 514
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R T Y+NLS+ FRL + + +Q++ YAVRL MR+ L A +KWG S+ + KL++L
Sbjct: 38 RATCSYENLSERFRLKERSFGRQYSQFYAVRLMAMRKKLAAAARRKWGNSLPIKKLTELK 97
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
E+C IIGTLFK +LKP +LKE+S E L+ QP ++VSD D ++LEDE +R+ L
Sbjct: 98 LD--EKCCIIGTLFKKMELKPCVLKEMSAEQNLLLQPSRANYVSDDDFMVLEDESERVVL 155
Query: 131 HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFT 190
GNI++ + ++G ++A+ G +GKF V D C + ++ L + A
Sbjct: 156 TGNIEVGSSISGTIMALSGRTSDDGKFVVEDSCTSGLPYQVAPDLDQD--------IAEG 207
Query: 191 DDDFIRLWEGLFFSMWMSD 209
+D F+ L GL F D
Sbjct: 208 NDRFLVLVSGLGFGEESQD 226
>gi|340716985|ref|XP_003396970.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
terrestris]
Length = 448
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 4/168 (2%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R ADYK+LS+ F DYSKQ+AHIY+ RL ++R+ L RV KWG +V ++KL+D
Sbjct: 24 FEREQADYKDLSKKFVNMKNDYSKQYAHIYSARLAELRDVLTPRVKAKWG-NVPIVKLAD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++C+IIGTL+KHQQ KP+IL+E+SEE + ++ S+ D+ LEDE+ RI
Sbjct: 83 LENLENQQCIIIGTLYKHQQWKPSILRELSEEHQFNVSCSKPNYCSEKDQPFLEDEMLRI 142
Query: 129 PLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
L G +D+ VTGVV A+ G +G F V D C+ P P+ +L
Sbjct: 143 KLVGEQVDLKQIVTGVVCAVLGNENSDGAFTVKDWCF--PGCAPKESL 188
>gi|363747285|ref|XP_003643965.1| PREDICTED: DNA polymerase delta subunit 2-like [Gallus gallus]
Length = 466
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS 62
+ E ++ R +D+ + SQ FRL + +S+Q+AH+YA RL MR L + +WG V
Sbjct: 18 SAEPPTFARTGSDFADRSQPFRLGERSFSRQYAHLYATRLLCMRPRLEQQARLRWGDGVL 77
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 122
+ KL L E C ++GTLFK +L+P+IL+EI+EE LVPQP +V SDEL+LE
Sbjct: 78 LRKLCQLQVG--ERCCVVGTLFKAMRLQPSILQEINEEHNLVPQPSLAKYVDPSDELVLE 135
Query: 123 DELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
DELQRI L G+I+ VTG V+A+ G +GKF V + C+A
Sbjct: 136 DELQRIKLTGSIEASRLVTGAVLAVYGHEQEDGKFLVEEHCFA 178
>gi|380018199|ref|XP_003693022.1| PREDICTED: DNA polymerase delta small subunit-like [Apis florea]
Length = 444
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 111/168 (66%), Gaps = 4/168 (2%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R A YK+LS+ F + DYSKQFAHIY+ RL ++R+ L+ RV KW ++V ++KL+D
Sbjct: 24 FKRKRAQYKDLSEKFAITRSDYSKQFAHIYSARLAELRDILIPRVQTKW-ENVPIIKLAD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++C++IGTL+KHQQ KP+IL+E+SE+ +L + + S+ D+ LEDE+ RI
Sbjct: 83 LENLEGQQCILIGTLYKHQQWKPSILRELSEDHQLSLSCSKSDYCSEKDQSFLEDEMLRI 142
Query: 129 PLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
L G+ +++ VTGVV AI G +G F V D C+ P P+ +L
Sbjct: 143 KLVGDQVNLKQIVTGVVCAILGNENNDGTFMVKDWCF--PGCAPKESL 188
>gi|328789052|ref|XP_001121190.2| PREDICTED: DNA polymerase delta small subunit-like [Apis mellifera]
Length = 443
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R A YK+LS+ F + DYSKQFAHIY+ RL ++R+ L+ RV KW +++ ++KL+D
Sbjct: 24 FERKRAQYKDLSEKFAITKSDYSKQFAHIYSARLAELRDILIPRVQTKW-ENIPIIKLAD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++C++IGTL+KHQQ KP+IL+E+SE+ +L + + S+ D+ LEDE+ RI
Sbjct: 83 LENLEGQQCILIGTLYKHQQWKPSILRELSEDHQLSLSCSKSDYCSEKDQSFLEDEMLRI 142
Query: 129 PLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
L GN +++ VTGVV A+ G +G F V D C+ P P+ L
Sbjct: 143 KLVGNQVNLKQIVTGVVCAVLGNENSDGTFMVKDWCF--PGCAPKEPL 188
>gi|195125359|ref|XP_002007146.1| GI12543 [Drosophila mojavensis]
gi|193918755|gb|EDW17622.1| GI12543 [Drosophila mojavensis]
Length = 432
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R + Y+NLS + L + DY KQF H+Y RL +M L ++WG V ++KL +L
Sbjct: 4 RLSCAYENLSSSYLLTTTDYQKQFCHLYTHRLAEMTRLLTPLALKEWGTQVPIMKLCELR 63
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
+C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++ D+LILEDELQR+ L
Sbjct: 64 GEQNVQCIIIGTIYKHQAHKPSILRDISEENQLAPQPQRQNYSEPEDKLILEDELQRVRL 123
Query: 131 HGN--IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFKPRTTLSNNENKYVNHVD 187
G ++ H TG+V A+KG G F V + + + KP T N++ ++ +D
Sbjct: 124 QGGEFLESHKLATGIVCAVKGDTDSEGFFNVEKILFLESGPQKPLTVKRNSKLILISGLD 183
Query: 188 AFTDDDFIRLWEGLFFSMWMS 208
+F+ F W+S
Sbjct: 184 QLQSHNFVDALN--MFQYWLS 202
>gi|350408749|ref|XP_003488499.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
impatiens]
Length = 448
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R ADYK+LS+ F DYSKQ+AHIY+ RL ++R+ L RV KWG +V ++KL+D
Sbjct: 24 FEREQADYKDLSKKFVNMKSDYSKQYAHIYSARLAELRDVLTPRVKAKWG-NVPIVKLAD 82
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++C+IIGTL+KHQ KP+IL+E+SEE + ++ S+ D+ LEDE+ RI
Sbjct: 83 LENLENQQCIIIGTLYKHQPWKPSILRELSEEHQFNVSCSKPNYCSEKDQPFLEDEMLRI 142
Query: 129 PLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
L G +D+ VTGVV A+ G +G F V D C+ P P+ +L
Sbjct: 143 KLVGEQVDLKQIVTGVVCAVLGNENSDGTFMVKDWCF--PGCAPKESL 188
>gi|383853211|ref|XP_003702116.1| PREDICTED: DNA polymerase delta small subunit-like [Megachile
rotundata]
Length = 444
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 2/176 (1%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R A Y +LS+ F DYSKQFAHIYA RL ++R L+ RV KWG ++ ++KL++
Sbjct: 21 FDRKQAQYTDLSKKFVNTKNDYSKQFAHIYASRLAELRSVLIPRVQSKWG-NIPIVKLAE 79
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ECVIIGTL+KHQQ KP+IL+E+SE+ +L + + S+ D+ LEDE+ RI
Sbjct: 80 LENLEGRECVIIGTLYKHQQWKPSILRELSEDHQLSLPSSKSDYCSEKDQPFLEDEMLRI 139
Query: 129 PLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
L G +D+ VTGVV A+ G +G F V + C+ K T +E K V
Sbjct: 140 KLVGEEVDLKQIVTGVVCAVLGKENNDGTFMVKEWCFPDCAPKESVTNCTSEGKVV 195
>gi|195403405|ref|XP_002060280.1| GJ16059 [Drosophila virilis]
gi|194140619|gb|EDW57093.1| GJ16059 [Drosophila virilis]
Length = 432
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
+R Y+NLS + L + DY KQF H+YA RL +M L KWGK V ++KL +L
Sbjct: 3 SRLNCHYENLSSPYLLQTTDYQKQFCHLYAHRLAEMTRLLAPLGQTKWGKEVPIMKLCEL 62
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
+C+IIGT++KHQ KP+IL++ISEE +L PQPQ ++ D+++LEDELQR+
Sbjct: 63 RGEQNVQCIIIGTVYKHQAHKPSILRDISEENQLAPQPQRQNYSEPEDKVMLEDELQRVR 122
Query: 130 LHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
L G +++ N TG+V A+KG +G F V +V +
Sbjct: 123 LQGEHLEARNLATGIVCAVKGGTDNDGYFNVEEVLF 158
>gi|307192428|gb|EFN75644.1| DNA polymerase delta small subunit [Harpegnathos saltator]
Length = 459
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+ + R A Y++L+ + S D+SKQF +IYAVRL ++RE L+++V KWG + +LKL
Sbjct: 23 QEFQRQHAQYEDLTADLKNKSVDFSKQFCYIYAVRLAELREILISQVVAKWG-DIRILKL 81
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
++L + + +ECVIIGTL+KHQ+ KP+IL+E+SE+ +L ++ S+ D+L LEDE+
Sbjct: 82 AELEDFEGQECVIIGTLYKHQKSKPSILQELSEDHQLTLLEPKPNYCSEKDQLFLEDEML 141
Query: 127 RIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
RI L +I D+ N VTGVV A+ G +G F + + C+ P PR+ L + ++K
Sbjct: 142 RIKLMVDIADLKNYVTGVVCAVLGYKEKDGTFAIKEWCF--PGCIPRSLLVSPQSK 195
>gi|270011510|gb|EFA07958.1| hypothetical protein TcasGA2_TC005539 [Tribolium castaneum]
Length = 295
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R + +Y+NLS+ + + DY KQ+ +IY RL +M L +++KWG + KL L+
Sbjct: 4 RLSLEYENLSRKWSEVAPDYHKQYFNIYLARLKEMTALLEVNIAKKWGTQYPICKLHKLS 63
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
E + +CV+IGTLFK+Q+LKP+ILK+++EE +LVPQP THF SDEL +EDELQR +
Sbjct: 64 EENHPKCVVIGTLFKNQKLKPSILKQLAEEDQLVPQPIVTHFTDKSDELFIEDELQRYLI 123
Query: 131 HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
I VTG+ A+ GT G+F V D +A F+P+
Sbjct: 124 ISCIPCDYLVTGISCALLGTADDKGRFIVEDYTFAD--FRPQ 163
>gi|332016886|gb|EGI57695.1| DNA polymerase delta small subunit [Acromyrmex echinatior]
Length = 458
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 115/182 (63%), Gaps = 4/182 (2%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS 60
+ N + + R Y++LS F S D+S+QF IYAVRL ++RE L+ RV KWG
Sbjct: 16 LGNENSQEFKRQDVQYEDLSSDFDNKSIDFSRQFCSIYAVRLAELRETLIPRVVAKWG-D 74
Query: 61 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELI 120
V ++KL++L + + ++CVIIGTL+KHQ+ KP+IL E+SE+ +L +++ S+ D+L
Sbjct: 75 VQIVKLAELEDFERQKCVIIGTLYKHQKCKPSILHELSEDHQLTLSEPKSNYCSEKDQLF 134
Query: 121 LEDELQRIPLH-GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNE 179
LEDE+ RI L + D+ N VTGVV AI G NG F++ + C+ P PR+ + +
Sbjct: 135 LEDEMLRIKLVIEDADLKNYVTGVVCAILGYKDKNGSFEIKEWCF--PGCVPRSLPAQPK 192
Query: 180 NK 181
+K
Sbjct: 193 SK 194
>gi|156537658|ref|XP_001607856.1| PREDICTED: DNA polymerase delta small subunit-like [Nasonia
vitripennis]
Length = 449
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R +A++++ + F++ S+ +S+QF+ IY RL+ ++ +L R KW K VL + DL
Sbjct: 6 RKSAEFEDFGR-FQIESRSFSRQFSGIYKARLSSLKAKVLKRARAKWSKH-KVLHIVDLT 63
Query: 71 ETDTEEC--VIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
+ + EE +IIGTL+KHQ+LKP+ILKEI+EEL+ VPQP ++ S D L LED++ R+
Sbjct: 64 KDEYEEVPSIIIGTLYKHQELKPSILKEIAEELQAVPQPSRLNYCSTKDSLYLEDDVSRV 123
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
L GN+ VTG++ A+ G +G F V DVCY P +
Sbjct: 124 KLVGNLTAEALVTGLICAVCGHQTKDGSFWVEDVCYPGPYLR 165
>gi|195587048|ref|XP_002083277.1| GD13645 [Drosophila simulans]
gi|194195286|gb|EDX08862.1| GD13645 [Drosophila simulans]
Length = 431
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS FRL DY KQF H+YA RL +M L +KWG + KL +L
Sbjct: 9 YENLSSIFRLKGHDYQKQFCHLYAHRLAEMTRLLTPLAQKKWGSKEPIKKLCELRGEQDV 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G ++
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGELN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G +G F V D+ +
Sbjct: 129 GQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|195336716|ref|XP_002034979.1| GM14443 [Drosophila sechellia]
gi|194128072|gb|EDW50115.1| GM14443 [Drosophila sechellia]
Length = 418
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS FRL DY KQF H+YA RL +M L +KWG + KL +L
Sbjct: 9 YENLSSIFRLKGHDYQKQFCHLYAHRLAEMTRLLTPLAQKKWGSKEPIKKLCELRGEQDV 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G ++
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGELN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G +G F V D+ +
Sbjct: 129 GQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|21358653|ref|NP_647659.1| CG12018 [Drosophila melanogaster]
gi|13431497|sp|Q9W088.1|DPOD2_DROME RecName: Full=DNA polymerase delta small subunit
gi|7292154|gb|AAF47566.1| CG12018 [Drosophila melanogaster]
Length = 431
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS FRL DY KQF H+YA RL +M L +KWG + KL +L
Sbjct: 9 YENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKWGNKEPIKKLCELRGEQDV 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G ++
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGKLN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G +G F V D+ +
Sbjct: 129 GQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|21064173|gb|AAM29316.1| AT27586p [Drosophila melanogaster]
Length = 431
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS FRL DY KQF H+YA RL +M L +KWG + KL +L
Sbjct: 9 YENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKWGNKEPIKKLCELRGEQDV 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G ++
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGKLN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G +G F V D+ +
Sbjct: 129 GQLLATGVVCAALGGTDSDGFFNVEDILF 157
>gi|194864974|ref|XP_001971198.1| GG14822 [Drosophila erecta]
gi|190652981|gb|EDV50224.1| GG14822 [Drosophila erecta]
Length = 431
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS FRL DY KQF H+YA RL +M L +KWG + KL +L
Sbjct: 9 YENLSSIFRLKGHDYQKQFCHLYAHRLAEMTRLLTPLAQKKWGNKEPIKKLCELRGEQDV 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G ++
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGQLN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G G F V D+ +
Sbjct: 129 GQFLATGVVCAALGGTDSEGFFNVEDMLF 157
>gi|194747040|ref|XP_001955962.1| GF24834 [Drosophila ananassae]
gi|190623244|gb|EDV38768.1| GF24834 [Drosophila ananassae]
Length = 432
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R +Y+NLS FRL + DY KQF H+YA RL +M L +KWG+ + KL +L
Sbjct: 4 RRETNYENLSAQFRLKAHDYQKQFCHLYAHRLAEMTRLLSPLAQEKWGRQEPIKKLCELR 63
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
C++IGT++KHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L
Sbjct: 64 GEQDVHCILIGTIYKHQAHKPSILRDISEENQLAPQPPRQNYSEPEDKVVLEDELQRVRL 123
Query: 131 HGNIDIHNQV--TGVVVAIKGTPVGNGKFKVSDVCY 164
G + + +Q+ TGVV A+ G G F V D+ Y
Sbjct: 124 QGEL-LQSQLMATGVVCAVLGGTDSEGFFNVEDMLY 158
>gi|195998648|ref|XP_002109192.1| hypothetical protein TRIADDRAFT_52972 [Trichoplax adhaerens]
gi|190587316|gb|EDV27358.1| hypothetical protein TRIADDRAFT_52972 [Trichoplax adhaerens]
Length = 448
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 11 RPTADYKNLSQCFRLA--SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
R +A NLSQ F + +++++ Q+ +IY RL MR+ LL + WG ++ KL +
Sbjct: 13 RLSASVDNLSQRFYFSEQNRNFTTQYCNIYTSRLVAMRDSLLQAAKRAWGNDINYCKLME 72
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L +T C IIGTLFK +PNIL+EIS+E L+P P T + DSDEL+ EDE QRI
Sbjct: 73 L-KTGITSC-IIGTLFKRMSARPNILQEISDEYNLIPLPPRTKYADDSDELVAEDETQRI 130
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYV 183
L GNI++ VTGV+VA+ G + GKF V+++ A P PR + N +KY+
Sbjct: 131 SLTGNINVTKSVTGVIVALLGKELDGGKFYVNEMVSAGLPKQIPRPFIHN--DKYI 184
>gi|195490562|ref|XP_002093191.1| GE21185 [Drosophila yakuba]
gi|194179292|gb|EDW92903.1| GE21185 [Drosophila yakuba]
Length = 431
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE 75
Y+NLS F L DY KQF H+YA RL +M L V +KWG + KL +L
Sbjct: 9 YENLSSIFLLKGHDYQKQFCHLYAHRLAEMTRLLTPLVQKKWGNKEPIKKLCELRGEQDI 68
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
C++IGT+FKHQ KP+IL++ISEE +L PQP ++ D+++LEDELQR+ L G I+
Sbjct: 69 HCILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGEIN 128
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
TGVV A G +G F V D+ +
Sbjct: 129 GQFLATGVVCAALGGTDSDGFFNVEDMLF 157
>gi|242023263|ref|XP_002432055.1| DNA polymerase delta small subunit, putative [Pediculus humanus
corporis]
gi|212517413|gb|EEB19317.1| DNA polymerase delta small subunit, putative [Pediculus humanus
corporis]
Length = 328
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 85/120 (70%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R Y+N S F KD+ KQFAHIYA RL M++ + S KWG + + KLS+L
Sbjct: 26 RNEVKYQNHSSRFLCLKKDFKKQFAHIYAGRLKIMKQRTIQACSAKWGSQIPIRKLSELA 85
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
+ E+C++IGTLFKHQ+LKP++LKEISEE ++ PQP + F+S++D+LILEDE+QRI L
Sbjct: 86 DESKEKCIVIGTLFKHQELKPSVLKEISEEHQITPQPVLSKFISENDQLILEDEMQRISL 145
>gi|125976758|ref|XP_001352412.1| GA11341 [Drosophila pseudoobscura pseudoobscura]
gi|54641158|gb|EAL29908.1| GA11341 [Drosophila pseudoobscura pseudoobscura]
Length = 431
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 6/201 (2%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R + Y+NLS + L +Y KQF H+YA RL +M L +KWGK+ + KL +L
Sbjct: 4 RFESSYENLSSQYLLKEYNYQKQFCHLYAHRLAEMTRLLTPLAQKKWGKTEPIKKLCELR 63
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
C++IGT++KHQ KP+IL++ISEE +L PQP ++ D++ILEDELQR+ L
Sbjct: 64 GEQDVHCILIGTIYKHQAHKPSILRDISEENQLAPQPPRQNYSEPEDKVILEDELQRVRL 123
Query: 131 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC-YATPVFKPRTTLSNNENKYVNHVDA 188
G + TG+V A+ G G F V DV Y + KP +T+ N V+ +D
Sbjct: 124 QGKMLQTQLMATGIVCAVLGGTDNEGFFNVDDVMYYESGPQKPLSTIRNRLLVLVSGLDQ 183
Query: 189 FTDDDFIRLWEGL-FFSMWMS 208
++ E L F W+S
Sbjct: 184 LQAHTYV---EALNLFQYWLS 201
>gi|195170791|ref|XP_002026195.1| GL16053 [Drosophila persimilis]
gi|194111075|gb|EDW33118.1| GL16053 [Drosophila persimilis]
Length = 431
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 6/201 (2%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R + Y+NLS + L +Y KQF H+YA RL +M L +KWGK+ + KL +L
Sbjct: 4 RFESSYENLSSQYLLKEYNYQKQFCHLYAHRLAEMTRLLTPLAQKKWGKTEPIKKLCELR 63
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
C++IGT++KHQ KP+IL++ISEE +L PQP ++ D++ILEDELQR+ L
Sbjct: 64 GEQDVHCILIGTIYKHQAHKPSILRDISEENQLAPQPPRQNYSEPEDKVILEDELQRVRL 123
Query: 131 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC-YATPVFKPRTTLSNNENKYVNHVDA 188
G + TG+V A+ G G F V DV Y + KP +T+ N V+ +D
Sbjct: 124 QGKMLQTQLMATGIVCAVLGGTDNEGFFNVDDVMYYESGPQKPLSTIRNRLLVLVSGLDQ 183
Query: 189 FTDDDFIRLWEGL-FFSMWMS 208
++ E L F W+S
Sbjct: 184 LQAHTYV---EALNLFQYWLS 201
>gi|307175177|gb|EFN65270.1| DNA polymerase delta small subunit [Camponotus floridanus]
Length = 460
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 114/176 (64%), Gaps = 4/176 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+ + R Y++L+ F D+SKQF HIY+VRL +++ L+ R+ KWGK V +LKL
Sbjct: 22 EEFERQQVQYEDLTVDFNDKLIDFSKQFCHIYSVRLAELKAILIPRIIAKWGK-VKILKL 80
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
++L + + ++CVI+GTL+KHQ+ KP+IL E+SE+ +L +++ S+ D+L LEDE+
Sbjct: 81 AELEDFEGQQCVIVGTLYKHQKWKPSILHELSEDYQLTLPELRSNYCSEKDQLFLEDEML 140
Query: 127 RIPLH-GNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
RI L + ++ N VTG+V AI G +G F V + C+ P P+++L+ ++K
Sbjct: 141 RIRLLIEDAEMKNYVTGIVCAILGHKEKDGNFVVKEWCF--PGCVPKSSLTQLKSK 194
>gi|195435810|ref|XP_002065872.1| GK16535 [Drosophila willistoni]
gi|194161957|gb|EDW76858.1| GK16535 [Drosophila willistoni]
Length = 434
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R + Y+NLS + + + DY KQF H+YA RL +M L +KWG + KL +L+
Sbjct: 5 RVKSSYENLSGQYLVKAYDYQKQFCHLYAHRLAEMTRLLTPLAQKKWGTKEPIKKLCELH 64
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
C++IGT++KHQ KP+IL++ISEE +L PQP ++ D++ILEDELQR+ L
Sbjct: 65 AEQDIHCILIGTIYKHQVHKPSILRDISEENQLAPQPPRQNYSEPEDKVILEDELQRVRL 124
Query: 131 HG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
G ++ TG+V AI G P +G F V DV Y
Sbjct: 125 RGEHLTGQLMATGIVCAIIGVPDNDGFFNVEDVLY 159
>gi|449691738|ref|XP_004212780.1| PREDICTED: DNA polymerase delta subunit 2-like, partial [Hydra
magnipapillata]
Length = 215
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 11 RPTADYKNLSQCFRLA-SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R T YKN+S F + + + Q+ +Y VRL+ MR+ ++ +KWGK + +++LSD+
Sbjct: 8 RDTCSYKNVSDKFYFSKQRKFDLQYFQLYTVRLSAMRQRIIDVAKKKWGKDIKIMELSDI 67
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E E+CV++G LF+ +L+P+ILKEI++E ++P P H + S D L LE + QRI
Sbjct: 68 KEG--EDCVVVGILFRKMELQPSILKEIAQEEGVIPLPPHEKYTSTDDILYLEAQQQRIV 125
Query: 130 LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP 171
L G+I++ + +TG VVA++G +GKF V + Y + P
Sbjct: 126 LIGDIEVSSSITGSVVAVRGHEDSSGKFVVVNFSYCGLPYLP 167
>gi|383853092|ref|XP_003702058.1| PREDICTED: DNA polymerase delta small subunit-like [Megachile
rotundata]
Length = 445
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 115/177 (64%), Gaps = 6/177 (3%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R + ++++ + F++ SK+++KQ+ +IY RL +++ LL + KW + V+ +S+
Sbjct: 9 HRRKSVEFQDFEK-FKILSKNFTKQYCNIYNARLTALKDHLLQQAKIKWAQ-YKVVTISE 66
Query: 69 LNE-TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
++E T+ + ++IGTL+KHQ+LKP+IL+E+SEEL+L QP +++ S D L LEDE R
Sbjct: 67 VSERTENNDSIVIGTLYKHQELKPSILRELSEELQLATQPARSNYASFKDVLYLEDESLR 126
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRT--TLSNNENK 181
I L GN ++I + VTGVV A+ G + NG F V D CY KP LS+++ K
Sbjct: 127 IKLVGNHMNIQDAVTGVVCAVLGHELENGSFLVIDWCYPGCCPKPSAFNKLSSDKGK 183
>gi|156548446|ref|XP_001605019.1| PREDICTED: DNA polymerase delta small subunit-like [Nasonia
vitripennis]
Length = 451
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
+ R T Y + + F +Y+KQFA +Y RL ++ L ++++KWGK V ++ LSD
Sbjct: 17 FERATVKYTDQTDRFSKEGDNYTKQFASLYVKRLEELYPILKEKLTKKWGKDVHLIPLSD 76
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQR 127
+ + + C IIGTL+KHQ KP+IL+E+SEE ++ VP P+ + SD D+L LED+ R
Sbjct: 77 IEDQHGKRCAIIGTLYKHQPNKPSILQELSEEHQMTVPVPK-PDYCSDEDQLFLEDQTSR 135
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
I L G+ +++ VTGVV A+ G+ F+V D C+A
Sbjct: 136 IRLTGDKVNVRESVTGVVCAVIGSENQKSTFEVEDWCFA 174
>gi|380018443|ref|XP_003693138.1| PREDICTED: DNA polymerase delta small subunit-like [Apis florea]
Length = 420
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSVLKL 66
Y R + + + + F + ++ +Q+ +IY RL +++ +L +V KW + VS+ +L
Sbjct: 8 YNRKSFKFDDFKK-FEIFTQCSKQQYCNIYNARLKALKDHILQKVKIKWAHYEIVSLSQL 66
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+ N+ +T CVIIGTL+KHQ+L+P+IL E+SEEL+L+PQP ++ S D L LEDE
Sbjct: 67 CERNQNNT--CVIIGTLYKHQELRPSILNELSEELQLIPQPARINYASFKDILYLEDETL 124
Query: 127 RIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNE 179
RI L G +I+I + VTG+V A+ G + G F V+D C+ P P+ ++ N++
Sbjct: 125 RIKLVGTHINIQDIVTGIVCAVCGHELETGAFLVTDWCF--PGCCPKLSILNSQ 176
>gi|328789089|ref|XP_001122961.2| PREDICTED: DNA polymerase delta small subunit-like [Apis mellifera]
Length = 444
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSVLKL 66
Y R + + + + F + ++ +Q+ +IY RL +++ +L +V KW + VS+ +L
Sbjct: 8 YNRKSFKFDDFKK-FEIFTQCSKQQYCNIYNARLKALKDHILEKVKIKWAHYEIVSLSQL 66
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
+ N+ +T C+IIGTL+KHQ+L+ +IL E+SEEL+L+PQP T++ S D L LEDE
Sbjct: 67 CERNQNNT--CIIIGTLYKHQELRSSILNELSEELQLIPQPARTNYASFKDILYLEDETL 124
Query: 127 RIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNE 179
RI L G + +I + VTG+V A+ G + NG F V+D C+ P P+ ++ N++
Sbjct: 125 RIKLVGTHKNIQDIVTGIVCAVCGHELENGAFLVTDWCF--PGCYPKLSIFNSQ 176
>gi|350406313|ref|XP_003487727.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
impatiens]
Length = 445
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 6/159 (3%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSVLK 65
+Y R + +++ + F ++ + + +Q+ IY RL +++ LL + KWG K V++ +
Sbjct: 8 TYRRKSCIFEDFKK-FNISEQRFEQQYCSIYKARLKALKDYLLQKAKIKWGHNKIVTLEQ 66
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
LS+ NE DT C+IIGTL+KHQ+LKP++L+E+S EL+L QP ++ S D L LEDE
Sbjct: 67 LSERNENDT--CIIIGTLYKHQELKPSLLRELSTELQLQTQPARANYASFKDILYLEDET 124
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 163
RI L N I+I + VTG+V A+ G + +G+ V D C
Sbjct: 125 LRIKLVDNHINIQDVVTGIVCAVLGHELKDGELSVIDWC 163
>gi|340716397|ref|XP_003396685.1| PREDICTED: DNA polymerase delta small subunit-like [Bombus
terrestris]
Length = 445
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 6/159 (3%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSVLK 65
+Y R + +++ + F ++ + + +Q+ IY RL +++ LL + KWG K V++ +
Sbjct: 8 TYHRKSCVFEDFKK-FNISEQRFEQQYCSIYKARLKALKDHLLQKAKIKWGHNKIVTLEQ 66
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
LS+ NE DT C+IIGTL+KHQ+LKP++L+E+S EL+L QP ++ S D L LEDE
Sbjct: 67 LSERNENDT--CIIIGTLYKHQELKPSLLRELSTELQLQTQPARANYASFKDILYLEDET 124
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 163
RI L N I+I + VTG+V A+ G + +G+ V D C
Sbjct: 125 LRIKLVDNHINIQDVVTGIVCAVLGHDLKDGELSVIDWC 163
>gi|115450481|ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|13431489|sp|Q9LRE5.1|DPOD2_ORYSJ RecName: Full=DNA polymerase delta small subunit
gi|9188572|dbj|BAA99574.1| OsPol delta small subunit [Oryza sativa Japonica Group]
gi|108705983|gb|ABF93778.1| DNA polymerase delta small subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113547312|dbj|BAF10755.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|215695508|dbj|BAG90699.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624129|gb|EEE58261.1| hypothetical protein OsJ_09265 [Oryza sativa Japonica Group]
Length = 429
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 7/182 (3%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R A+Y NL + + + + Y +Q++HIY RL+ MR L A V W + V + L
Sbjct: 3 RKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVP-SWKPHLPVTTVLGL 61
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 62 EEG--KDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVT 119
Query: 130 LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVDA 188
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV V
Sbjct: 120 LAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYVVFVSG 177
Query: 189 FT 190
+
Sbjct: 178 LS 179
>gi|6063533|dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 7/182 (3%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R A+Y NL + + + + Y +Q++HIY RL+ MR L A V W + V + L
Sbjct: 3 RKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVP-SWKPHLPVTTVLGL 61
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 62 EEG--KDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVT 119
Query: 130 LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVDA 188
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV V
Sbjct: 120 LAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYVVFVSG 177
Query: 189 FT 190
+
Sbjct: 178 LS 179
>gi|218192011|gb|EEC74438.1| hypothetical protein OsI_09828 [Oryza sativa Indica Group]
Length = 429
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 7/182 (3%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R A+Y NL + + + + Y +Q++HIY RL+ MR L A V W + V + L
Sbjct: 3 RKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVP-SWKPHLPVTTVLGL 61
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E ++C+I+GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 62 EEG--KDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVT 119
Query: 130 LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVDA 188
L G I VTGVV+A+ G G F V D+ A P+ TL S NE+KYV V
Sbjct: 120 LAGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAG--IPPQITLPSINEDKYVVFVSG 177
Query: 189 FT 190
+
Sbjct: 178 LS 179
>gi|242037091|ref|XP_002465940.1| hypothetical protein SORBIDRAFT_01g048590 [Sorghum bicolor]
gi|241919794|gb|EER92938.1| hypothetical protein SORBIDRAFT_01g048590 [Sorghum bicolor]
Length = 435
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K R A Y NL + + + + Y +Q++HIY RL+ MR L A V W + V
Sbjct: 5 KPMERKQAAYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVP-SWKPQLPVTT 63
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE
Sbjct: 64 VLGLEEG--KDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDES 121
Query: 126 QRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN-NENKYVN 184
R+ L G I VTGVVVA+ G G F V DV A P+T LS+ E+KYV
Sbjct: 122 GRVTLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQTALSSAAEDKYVV 179
Query: 185 HVDAFT 190
V +
Sbjct: 180 FVSGLS 185
>gi|357114246|ref|XP_003558911.1| PREDICTED: DNA polymerase delta small subunit-like [Brachypodium
distachyon]
Length = 429
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARV-SQKWGKSVSVLKLSD 68
R ADY L + + + + Y +Q++HIY RL+ MR L A V S+K V+ +
Sbjct: 3 RKQADYSTLDERYTIQGERYQGQQYSHIYFTRLHHMRNILRALVPSRKPHLPVTTV---- 58
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++CV++GTL+KH +LKP+IL E S+E +P + +F+ D LILEDE R+
Sbjct: 59 LGLEEGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDNLILEDESGRV 118
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVD 187
L G I VTGVVVA+ G G F V DV A P+T L S NE+KYV V
Sbjct: 119 ALAGAISPAAYVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQTALPSINEDKYVVFVS 176
Query: 188 AFT 190
+
Sbjct: 177 GLS 179
>gi|293335627|ref|NP_001168398.1| uncharacterized protein LOC100382167 [Zea mays]
gi|223948007|gb|ACN28087.1| unknown [Zea mays]
gi|414864557|tpg|DAA43114.1| TPA: hypothetical protein ZEAMMB73_615392 [Zea mays]
Length = 435
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K R A Y NL + + + + Y +Q++HIY RL+ MR L A V W + V
Sbjct: 5 KPMERKQAAYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVP-SWKPQLPVTT 63
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE
Sbjct: 64 VLGLEEG--KDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDES 121
Query: 126 QRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN-NENKYVN 184
R+ L G I VTGVVVA+ G G F V DV A P++ LS+ E+KYV
Sbjct: 122 GRVTLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQSALSSAEEDKYVV 179
Query: 185 HVDAFT 190
+ +
Sbjct: 180 FISGLS 185
>gi|326433133|gb|EGD78703.1| hypothetical protein PTSG_01682 [Salpingoeca sp. ATCC 50818]
Length = 456
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 92/160 (57%), Gaps = 6/160 (3%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFK 85
+S D+ +Q+AH+Y R N ++ + + KW V KL D+ + +ECV+ G L+K
Sbjct: 42 SSHDFDRQYAHVYFTRYNSFKKLIETAATNKWPSKHVVPKLLDIEKE--KECVVFGVLYK 99
Query: 86 HQQLKPNILKEI-SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGV 143
LKPNIL E + E P P+ + + SD D L+LED RI L G+ +D+ V+GV
Sbjct: 100 DMPLKPNILDEYHARENYEAPPPERSKYNSDEDALVLEDMSGRIVLIGDALDVGTHVSGV 159
Query: 144 VVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
VVA+ G + +G+F+++DVCY P F P+ L YV
Sbjct: 160 VVAVLGKALPSGEFQIADVCY--PRFPPQKRLPKIPPSYV 197
>gi|440804352|gb|ELR25229.1| DNA polymerase epsilon subunit B protein [Acanthamoeba castellanii
str. Neff]
Length = 482
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD-- 68
R T DY FR +K+YS+Q+A +Y RL KMR LL ++W + V S
Sbjct: 51 RETGDYDAAHHRFRTLTKEYSQQYAPLYYHRLQKMRPRLLQAAKERWEGKLGVSSSSSST 110
Query: 69 ----------LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE 118
L EE ++ GTL+K L+PNIL+ ++E ++P P +++VS+ D
Sbjct: 111 AKLPRIVNKILELRADEEVIVAGTLYKEMPLRPNILESYAKERSIIPPPLRSNYVSEKDR 170
Query: 119 LILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFKPRTTL 175
LI+EDE RI L G +D+ VTG++VAI+G + +G F+V D+ + P+ R L
Sbjct: 171 LIIEDESGRISLVG-VDLPTDLVVTGIIVAIRGVELKDGDFQVDDIIFTGIPMQLKRPIL 229
Query: 176 SNNENKYVNHVDAFTDDDFIR 196
++KYV V + +R
Sbjct: 230 --EKDKYVALVSGINIGEEVR 248
>gi|348674378|gb|EGZ14197.1| hypothetical protein PHYSODRAFT_254404 [Phytophthora sojae]
Length = 433
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL-KLSDL 69
R + +Y Q F L K Y++QF+HIY RL ++R+ + +V ++ G V VL K+ DL
Sbjct: 9 RRSVEYTPTYQRFVLKQKSYAQQFSHIYVSRLQQLRDVVSVQVEERTGGRVPVLAKVIDL 68
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP-QPQHTHFVSDSDELILEDELQRI 128
+ D ECV+IGTL K + KP++ ++ E + P + +D DEL+LEDE R+
Sbjct: 69 -KADGRECVLIGTLLKVLEAKPDLFDALTSETGVTPIEKIDKSLATDKDELLLEDESGRV 127
Query: 129 PLHGNIDIHNQVTGVVVAIKG-TP--VGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVN 184
L G ID+ VTGVV+ ++G P G G+F V +V P F P+ L E++YV
Sbjct: 128 QLVGGIDVARLVTGVVLGVRGRVPRDGGGGQFFVEEVFL--PSFPPQHPLPERQESEYVA 185
Query: 185 HVDAFT 190
V +
Sbjct: 186 LVSGLS 191
>gi|194389848|dbj|BAG60440.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 54 SQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 113
SQ + V V KL +L E+C ++GTLFK L+P+IL+E+SEE L+PQP + ++
Sbjct: 36 SQPFRLGVGVKKLCELQPE--EKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYI 93
Query: 114 SDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
DEL+LEDELQRI L G ID+ VTG V+A+ G+ +GKF V D C+A
Sbjct: 94 HPDDELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFA 145
>gi|353235258|emb|CCA67274.1| related to dna polymerase delta small subunit [Piriformospora
indica DSM 11827]
Length = 480
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 17/204 (8%)
Query: 9 YTRPTADY----KNLSQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKW----G 58
YTRP A K L+ F L + D Y Q+A++Y RL+ +R+ ++ R Q+W G
Sbjct: 10 YTRPDALSSTLPKELANAFVLETNDASYKHQYANLYFSRLSLLRKQVIERAKQQWRSAIG 69
Query: 59 KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE 118
++ V ++ D+ + E C I+GT++K LK N+L ++++E + P P F S D
Sbjct: 70 NAIFVNRILDIKKG--ERCWIVGTVYKEMPLKDNVLNDLAKEHGVEPPPPRLKFHSKEDM 127
Query: 119 LILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN 177
+LEDE R+PL G +D N VTG+++A+ G G+F V DVCY P +T L+
Sbjct: 128 AVLEDESGRVPLGGEFLDSINIVTGLILAVLGVETTAGEFHVVDVCY--PGVAEQTPLAQ 185
Query: 178 NENKYVNHVDAFTDDDFIRLWEGL 201
+ K VD +++I L GL
Sbjct: 186 HGTKATMDVD--NANEWIALVSGL 207
>gi|320169509|gb|EFW46408.1| DNA polymerase delta small subunit [Capsaspora owczarzaki ATCC
30864]
Length = 484
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 11 RPTADYKNLSQCFRLASKD-YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL-SD 68
R A Y + ++ F++ + + +Q++HIY RL+ ++ +L R +W K + L S
Sbjct: 44 RAEASYASFNERFQVTQQRLFERQYSHIYFDRLHALKPIVLKRAQDRWTKPAAGLPAPSF 103
Query: 69 LNETDTEE----CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
+N+ E C +GTL+K LKP+ILKEI+EE LVPQP + SD D ++LED
Sbjct: 104 VNQLVHLEIGRRCFAVGTLYKEMTLKPSILKEIAEERDLVPQPPRARYTSDDDFIVLEDS 163
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP 171
R+ L GN VTG VVA+ GT G+F V + A P +P
Sbjct: 164 SGRVRLGGNFPSSELVTGDVVAVLGTEQSGGEFVVEEWLMAGPAPQP 210
>gi|332020437|gb|EGI60857.1| DNA polymerase delta subunit 2 [Acromyrmex echinatior]
Length = 447
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-- 58
M+ + Y R +K+L + F+L + Y+ +IY RLN +RE L R KW
Sbjct: 1 MEVDDSSEYDRKIVSFKDLGR-FKLTERRYNDNSLNIYTARLNDLREDTLHRAKLKWTDY 59
Query: 59 KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE 118
+ V V +LS E+ + ++IG L+K Q+LKP++L+++S+EL+L Q + ++ S D+
Sbjct: 60 QHVEVSRLS--LESSEKSYILIGVLYKDQRLKPSLLRDLSKELQLEAQLSN-NYASIDDQ 116
Query: 119 LILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN 177
L LEDE R+ L GN +DI VTG+V A+ G + NG F V D C+ KP + S+
Sbjct: 117 LFLEDETLRVKLVGNHMDIQEVVTGLVCAVLGHELENGTFLVEDWCFPGYYLKPSSVSSS 176
>gi|356504864|ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 13/184 (7%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGK 59
M+ ++C Y +L + F + + Y +Q++ IY RL+ MR L + V W
Sbjct: 3 MERVQCA--------YASLDEAFEIGKEAYQGQQYSQIYFARLHLMRTLLYSLVPH-WKP 53
Query: 60 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
+ V + L E +ECVI+GTL+KH +LKP IL E S+E +VP + +F+ D L
Sbjct: 54 NFPVCTVLGLEEG--KECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHL 111
Query: 120 ILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN 178
+LEDE R+ L G+I + ++ VTG+VVA+ G G G F V DV A + L
Sbjct: 112 VLEDESGRVKLSGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKPR 171
Query: 179 ENKY 182
E+KY
Sbjct: 172 EDKY 175
>gi|339264829|ref|XP_003366458.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
gi|316963190|gb|EFV48949.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
Length = 323
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 16/171 (9%)
Query: 29 DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQ 88
D+ +Q+ +IY RL R L+ + + +G+S + ++S+L E EECV IGT+ K Q
Sbjct: 56 DFQRQYFYIYRSRLEYGRRALIEKAHKTYGESKPIRRISELVER--EECVTIGTVCKIQD 113
Query: 89 LKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAI 147
L+PN+LKEI++E ++PQP SD+DE++LEDE RI L G+++ +VVA+
Sbjct: 114 LRPNVLKEIADEGHVIPQPIAPLKCTSDTDEVVLEDENLRIKLIGSVE------SIVVAV 167
Query: 148 KGTPVGNGKFKVSDVCY------ATPVFKPRTTLSNNENKYVNHVDAFTDD 192
G GKF V D+ + PV P +T S +++YV V D
Sbjct: 168 CGMVTSGGKFHVDDIIFLPVSAPTKPVADPGST-SQVDSRYVLLVSGLGFD 217
>gi|307189556|gb|EFN73926.1| DNA polymerase delta subunit 2 [Camponotus floridanus]
Length = 445
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 10/179 (5%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS 62
N CK Y R +K+ + F+L+ K Y +IY RLN +RE ++ R KW + S
Sbjct: 4 NDSCK-YNRKVVSFKDFGR-FKLSEKKYDDNSLNIYTARLNDLREDMIHRAKLKW-TNYS 60
Query: 63 VLKLSDLNETDTEEC-VIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELI 120
+++S L D E+ ++IG L+K Q+LKP++L+E+S+EL+L V QP ++ S +D+L
Sbjct: 61 YIEISRLALEDPEKSYILIGVLYKDQKLKPSLLRELSKELQLKVAQPSK-NYASANDKLF 119
Query: 121 LEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN 178
LEDE RI L GN +++ VTG+V AI G NG V D C+ P + P+ +S+
Sbjct: 120 LEDETLRIRLVGNHVNVQEVVTGLVCAILGHE-ENGTLWVEDWCF--PGYCPKPCISSG 175
>gi|255085562|ref|XP_002505212.1| predicted protein [Micromonas sp. RCC299]
gi|226520481|gb|ACO66470.1| predicted protein [Micromonas sp. RCC299]
Length = 455
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R DY + F L K Y + F +Y RL + L V KW V +K+ DL
Sbjct: 17 RAVLDYSARDERFALDKKIYGQYF-QLYFQRLMLLGPRLKQAVGAKW-PGVPAVKVLDLK 74
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKE-ISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E EECV++GTL+K +LKP+IL E + E + FVSD D L+LEDE R+
Sbjct: 75 EG--EECVVMGTLYKDMKLKPSILDEYVKEAGAKASEVAAKKFVSDDDSLVLEDEGARVR 132
Query: 130 LHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSNNENKYVNHV 186
L G + + VTGVV+A+KG V NG+F+V ++CY P + R + ++ + HV
Sbjct: 133 LTGKGVAVDCFVTGVVLAVKGRVVANGEFEVDEICYPAPAPQATRPSATDEASSAGRHV 191
>gi|148906690|gb|ABR16494.1| unknown [Picea sitchensis]
gi|148907279|gb|ABR16778.1| unknown [Picea sitchensis]
Length = 446
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGK--SVSVLKLS 67
R ADYK + + L + Y +Q++H+Y RL+K RE L + ++W S ++L L
Sbjct: 15 RKQADYKGQDERYLLRMQRYRGQQYSHLYYFRLHKFREILNTLIQKRWPNLPSCTILGLE 74
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
D +EC+I+GT++K QLKP++L E S+E + P Q +F+ D LILED+ R
Sbjct: 75 D-----GKECIIVGTVYKQMQLKPSVLDEYSKERSVTPIAQPHNFMHPDDYLILEDDSGR 129
Query: 128 IPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT--PVFKPRTTLSNNENKYV 183
+ L GN+ VTGVV A+ G +G F V + A P + S +NKY+
Sbjct: 130 VKLTGNVLSPSMYVTGVVAALHGKEGSDGDFYVQSILEAGLPPQHPLHSGYSLKDNKYI 188
>gi|28317170|gb|AAD46843.2|AF160903_1 HL03874p, partial [Drosophila melanogaster]
Length = 398
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%)
Query: 41 RLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE 100
RL +M L +KWG + KL +L C++IGT+FKHQ KP+IL++ISEE
Sbjct: 1 RLAEMTRLLTPLAQKKWGNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEE 60
Query: 101 LKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVS 160
+L PQP ++ D+++LEDELQR+ L G ++ TGVV A G +G F V
Sbjct: 61 NQLAPQPPRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFFNVE 120
Query: 161 DVCY 164
D+ +
Sbjct: 121 DILF 124
>gi|339244651|ref|XP_003378251.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
gi|316972858|gb|EFV56504.1| DNA polymerase subunit delta-2 [Trichinella spiralis]
Length = 474
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKH 86
+ D+ +Q+ +IY RL R L+ + + +G+S + ++S+L E EECV IGT+ K
Sbjct: 27 NADFQRQYFYIYRSRLEYGRTALIEKAHKTYGESKPIRRISELVER--EECVTIGTVCKI 84
Query: 87 QQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVV 145
Q L+PN+LKEI++E ++PQP SD+DE++LEDE RI L G+++ +VV
Sbjct: 85 QDLRPNVLKEIADEGHVIPQPIAPLKCTSDTDEVVLEDENLRIKLIGSVE------SIVV 138
Query: 146 AIKGTPVGNGKFKVSDVCY------ATPVFKPRTTLSNNENKYVNHVDAFTDD 192
A+ G GKF V D+ + PV P +T S +++YV V D
Sbjct: 139 AVCGMVTSGGKFHVDDIIFLPVSAPTKPVADPGST-SQVDSRYVLLVSGLGFD 190
>gi|356572096|ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGK 59
M+ ++C Y +L + F + + Y +Q++ IY RL+ MR L + + W
Sbjct: 3 MERVQCA--------YASLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPH-WKP 53
Query: 60 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
+ V + L E +ECVI+GTL+KH +LKP IL E S+E +VP + +F+ D L
Sbjct: 54 NSPVCTVLGLEEG--KECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHL 111
Query: 120 ILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN 178
+LEDE R+ L G I ++ VTG+VVA+ G G G F V DV A + L +
Sbjct: 112 VLEDESGRVKLSGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSR 171
Query: 179 ENKY 182
E+KY
Sbjct: 172 EDKY 175
>gi|149047650|gb|EDM00320.1| polymerase (DNA directed), delta 2, regulatory subunit, isoform
CRA_e [Rattus norvegicus]
Length = 133
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 12 PTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE 71
P A Y N SQ FRL + +++Q+AHIYA RL +MR L++R Q WG V V KL +L
Sbjct: 28 PVATYTNSSQPFRLGERSFNRQYAHIYATRLIQMRPFLVSRAQQHWGSQVEVKKLCELQ- 86
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVP 105
E+C ++GTLFK L+P+IL+EISEE L+P
Sbjct: 87 -PGEQCCVVGTLFKAMPLQPSILREISEEHNLIP 119
>gi|393245851|gb|EJD53361.1| hypothetical protein AURDEDRAFT_54409 [Auricularia delicata
TFB-10046 SS5]
Length = 454
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 12/203 (5%)
Query: 10 TRPTADYKNLSQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK-----SVS 62
TRP + + + F L + Y QFA++Y RL+K+R +L + KW SV
Sbjct: 2 TRPQSSLREAANPFLLDEGGRSYKHQFANLYFARLHKLRGDVLKQAKAKWASTDGAWSVH 61
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 122
V K+ L + + I+GTL+ +LKPN+L +I + +V SD D L+LE
Sbjct: 62 VPKV--LEVSKGQRSYIVGTLYMEMRLKPNVLDDIGHDHNIVSTTVRDKIYSDEDALMLE 119
Query: 123 DELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
DE RI L G+ + +N VTGV+VA G G+F+V+D+C+ P PR +L + +
Sbjct: 120 DESGRIKLIGDALSKYNLVTGVIVAALGCENIQGEFEVADLCFTAPA--PRASLKSEDAM 177
Query: 182 YVNHVDAFTDDDFIRLWEGLFFS 204
V+ + + + L GL F
Sbjct: 178 DVDSMCSSEVARHVALISGLDFG 200
>gi|301095655|ref|XP_002896927.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
gi|262108574|gb|EEY66626.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
Length = 458
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL-KLSD 68
+R + +Y Q F L K Y++QF+HIY RL ++R+ + +V + + VL K+ D
Sbjct: 8 SRHSVEYTPTYQRFVLKQKSYAQQFSHIYVSRLQQLRDVVSVQVQEHTAGRIPVLAKVID 67
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVP-QPQHTHFVSDSDELILEDELQR 127
L + D +ECV+IGTL K + KP+I ++ E + P + + DEL+LEDE R
Sbjct: 68 L-KADGQECVLIGTLLKVLEAKPDIFDALTSESGVKPIETIGRPLATKDDELLLEDESGR 126
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPV---GNGKFKVSDVCYATPVFKPRTTL-SNNENKYV 183
+ L GNID+ VTGVV+ ++G +G F V +V P F P+ L E++YV
Sbjct: 127 VQLVGNIDVARFVTGVVLGVRGRVARDGPDGHFLVEEVYL--PSFPPQHPLPERQESEYV 184
Query: 184 NHVDAF 189
V
Sbjct: 185 ALVSGL 190
>gi|42571181|ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit
gi|22531160|gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana]
gi|31376377|gb|AAP49515.1| At2g42120 [Arabidopsis thaliana]
gi|62320658|dbj|BAD95325.1| DNA polymerase delta small subunit like protein [Arabidopsis
thaliana]
gi|330254978|gb|AEC10072.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
Length = 440
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K + R +DY +L + F + + Y +Q++ IY RL+ MR LL ++ W + V K
Sbjct: 7 KIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMR-TLLYSLAPTWKSHLPVCK 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L + +EC+I+GTLFKH +LKP +L E S+E + P + +F+ D LILEDE
Sbjct: 66 VLGLEKG--KECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDES 123
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
R+ L G+ + VTGVVVA+ G G+F V DV A + + E+KYV
Sbjct: 124 GRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDKYV 182
>gi|326504838|dbj|BAK06710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 31 SKQFAHIYAVRLNKMRECLLARV-SQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQL 89
+Q++HIY RL+ MR L A V S+K V+ + L ++CV++GTL+KH +L
Sbjct: 20 GQQYSHIYYTRLHHMRTLLHALVPSRKPHLPVTTV----LGLEKGKDCVLVGTLYKHMKL 75
Query: 90 KPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKG 149
KP+IL E S+E +P + +F+ D LILEDE R+ L G I VTGVVVA+ G
Sbjct: 76 KPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVALAGAIPPAAYVTGVVVALHG 135
Query: 150 TPVGNGKFKVSDVCYATPVFKPRTTLSN-NENKYVNHVDAFT 190
G F V DV A P++ L NE+KYV V +
Sbjct: 136 KETSAGNFLVEDVMEAG--LPPQSVLPCINEDKYVVFVSGLS 175
>gi|302838033|ref|XP_002950575.1| hypothetical protein VOLCADRAFT_81183 [Volvox carteri f.
nagariensis]
gi|300264124|gb|EFJ48321.1| hypothetical protein VOLCADRAFT_81183 [Volvox carteri f.
nagariensis]
Length = 514
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLS 67
S+ R +A Y NL FR A + Y +Q+A +Y RL ++E +LARV Q W V V +
Sbjct: 34 SFNRASATYSNLDDRFRAAKRSYERQYAQLYFSRLMLLKEVMLARVQQLW-PGVPVCTIL 92
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
++ E ++E +IGT++K+ +LKP+IL E S++ L +F S D L+LEDE R
Sbjct: 93 EVPE--SKEVAVIGTVYKNMKLKPSILDEYSKDRGLKAALGAANFCSGDDSLVLEDEGAR 150
Query: 128 IPLHG------------------NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
+ L +++ VTG+V+A++G G F V+ VC+
Sbjct: 151 MVLRDVAGPGPAGGSTTSGGGSEPLNVQEIVTGLVLAVRGVHEPGGDFIVNAVCF 205
>gi|452823828|gb|EME30835.1| DNA polymerase delta subunit 2 [Galdieria sulphuraria]
Length = 454
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R T DY+ F L S++YS+Q++ IY RL +R + KW + + + L+
Sbjct: 13 RQTVDYEEEHNPFLLHSRNYSQQYSQIYFCRLAALRPVVENAARNKWTDGI-LFRDRLLH 71
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVP-QPQHTHFVSDSDELILEDELQRI 128
+ CVIIG ++K LKP+ILKE S+ + VP P FVSDSD +ILEDE RI
Sbjct: 72 LQQGDNCVIIGVIYKEMDLKPSILKEYSKNPAEPVPILPVKPSFVSDSDVVILEDETGRI 131
Query: 129 PLHGN---IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFKPRTTLSNN 178
L+ + + ++ +TG VVA+KG +G F V ++C+ P K +L N+
Sbjct: 132 RLNFDRCCLGVNILLTGTVVAVKGQETSSGDFSVDELCFPGIPPLKVPRSLDND 185
>gi|357509943|ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
gi|355500275|gb|AES81478.1| DNA polymerase delta small subunit [Medicago truncatula]
Length = 454
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 9 YTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLS 67
+ R Y++L + F + + Y +Q++ IY RL+ MR L + V W + V +
Sbjct: 5 FKRMQCSYESLDESFEIGKEMYRGQQYSQIYFARLHLMRTLLYSLVPH-WKPNTPVCTVL 63
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
L E +ECVI+GTLFK+ +LKP IL E S++ + VP H +FV + D L+LEDE R
Sbjct: 64 GLEEG--KECVIVGTLFKNMKLKPCILDEYSKQ-RSVPVKSH-NFVHEDDYLVLEDESGR 119
Query: 128 IPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHV 186
+ L G+I + + VTG+VVA+ G G G F V +V A + + + E+KYV V
Sbjct: 120 VKLGGSIIVPSVYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDKYVVLV 179
Query: 187 DAFT 190
+
Sbjct: 180 SGLS 183
>gi|403416179|emb|CCM02879.1| predicted protein [Fibroporia radiculosa]
Length = 556
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIG 81
A++ Y Q+A IY VRL +R+ +LAR ++W G V V ++ D+ + + C IIG
Sbjct: 36 ANRSYKHQYASIYFVRLQLLRKFVLARARRRWRGLSGNPVFVPRVLDVEKGNL--CYIIG 93
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQV 140
T++ LKPN+L++++ + L + S+ D++ LEDE RI L G + V
Sbjct: 94 TVYLDMPLKPNVLEDLARDHSLPAPAPRPKYHSEDDQVTLEDESGRIVLVGAPLRAAQLV 153
Query: 141 TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIR 196
TGVV+ + G G+F+V DVCYA +P + +S ++ DA D R
Sbjct: 154 TGVVLGVLGAETNGGEFEVIDVCYAGMAPQPDSDVSWEQSGATGAADAMDVDGAPR 209
>gi|255579737|ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
gi|223529721|gb|EEF31661.1| DNA polymerase delta small subunit, putative [Ricinus communis]
Length = 425
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 5/185 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
KS R Y +L + + + ++ Y +Q++ IY RL+ +R L + V W + V
Sbjct: 7 KSLHRKQCTYASLDETYEIQNETYRGQQYSQIYFARLHMIRTLLYSLVPL-WKSHLPVCT 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E +EC+I+GTL+KH +LKP IL E S+E +P + +F+ D L+LEDE
Sbjct: 66 VLGLVEG--KECIIVGTLYKHMKLKPCILDEYSKERSAIPLVKPHNFMHLDDHLVLEDES 123
Query: 126 QRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
R+ L G++ + VTG+VVA+ G G G F V DV A + L + E+KYV
Sbjct: 124 GRVKLGGDMLTPSAYVTGLVVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDKYVV 183
Query: 185 HVDAF 189
V
Sbjct: 184 FVSGL 188
>gi|224091621|ref|XP_002309305.1| predicted protein [Populus trichocarpa]
gi|222855281|gb|EEE92828.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 9/180 (5%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K+ R + Y++L + F + ++ Y +Q++ IY RL+ MR L + V+ W V V
Sbjct: 10 KNIQRKRSTYQSLDETFDIQNETYRGQQYSQIYFARLHLMRTLLYSLVTH-WKPHVPVCT 68
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E +EC+I+GTL+KH +LKP +L E S+E VP + +F+ D L+LEDE
Sbjct: 69 VLGLEEG--KECIIVGTLYKHMKLKPCVLDEYSKERSAVPLVKPHNFMHPDDHLVLEDES 126
Query: 126 QRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA--TPVFKPRTTLSNNENKY 182
R+ L G + VTG VVA+ G G F V DV A P +P+ L + E+KY
Sbjct: 127 GRVKLGGTVLSPSKYVTGGVVALHGKETTAGDFLVLDVFEAGLAPQIEPQ--LKSREDKY 184
>gi|225441449|ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K R + Y++L + FR+ + Y +Q++ IY RL+ MR L+ + W + V
Sbjct: 7 KHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMR-TLIYSLIPNWKPHLPVCT 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E +EC+I+GTL+KH +LKP IL E S+E + P + +F+ D L+LEDE
Sbjct: 66 VLGLEEG--KECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDES 123
Query: 126 QRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
R+ L G + + + VTG VV + G G+F V D+ A + L + E+KYV
Sbjct: 124 GRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVV 183
Query: 185 HVDAFT 190
V +
Sbjct: 184 FVSGLS 189
>gi|147776498|emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
K R + Y++L + FR+ + Y +Q++ IY RL+ MR L+ + W + V
Sbjct: 7 KHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMR-TLIYSLIPNWKPHLPVCT 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+ L E +EC+I+GTL+KH +LKP IL E S+E + P + +F+ D L+LEDE
Sbjct: 66 VLGLEEG--KECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDES 123
Query: 126 QRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
R+ L G + + + VTG VV + G G+F V D+ A + L + E+KYV
Sbjct: 124 GRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYV 182
>gi|426200498|gb|EKV50422.1| hypothetical protein AGABI2DRAFT_183500 [Agaricus bisporus var.
bisporus H97]
Length = 520
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECV 78
R +K Y Q+++IY +RL +R+ + KW GK V V ++ D+ +++ C
Sbjct: 31 IRKGNKSYKHQYSNIYFLRLRSLRQSVEEAALAKWKNLSGKPVMVPRVLDV--INSQLCY 88
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI-DIH 137
IIGT++ H LKPN++ +I+ + + P P T F SD+D ++LEDE RI L G +
Sbjct: 89 IIGTVYLHMPLKPNVMIDIARDHSIPPPPPPTKFYSDNDSIMLEDESGRIRLVGEVLKGK 148
Query: 138 NQVTGVVVAIKGTPVGNGKFKVSDVCY 164
N VTG+++ + G G FKV D+C+
Sbjct: 149 NIVTGIIIGVLGAETAEGDFKVVDICF 175
>gi|409082633|gb|EKM82991.1| hypothetical protein AGABI1DRAFT_118391 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 520
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECV 78
R +K Y Q+++IY +RL +R+ + KW GK V V ++ D+ +++ C
Sbjct: 31 IRKGNKSYKHQYSNIYFLRLRSLRQSVEEAALAKWKNLSGKPVMVPRVLDV--INSQLCY 88
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI-DIH 137
IIGT++ H LKPN++ +I+ + + P P T F SD+D ++LEDE RI L G +
Sbjct: 89 IIGTVYLHMPLKPNVMIDIARDHSIPPPPPPTKFYSDNDSIMLEDESGRIRLVGEVLKGK 148
Query: 138 NQVTGVVVAIKGTPVGNGKFKVSDVCY 164
N VTG+++ + G G FKV D+C+
Sbjct: 149 NIVTGIIIGVLGAETAEGDFKVVDICF 175
>gi|167537048|ref|XP_001750194.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771356|gb|EDQ85024.1| predicted protein [Monosiga brevicollis MX1]
Length = 999
Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 11 RPTADYKNLSQCFRL-ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-----GKSVSVL 64
R +A Y++ + FRL A ++Y KQ++++Y R +R+ ++AR KW G
Sbjct: 25 RASATYESHADRFRLPAHRNYDKQYSNLYFSRYMTLRKSVIARAKSKWQLDQPGAPPLAD 84
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEI-SEELKLVPQPQHTHFVSDSDELILED 123
+ L + CV++GT++K +LKPNIL E + E P P+ + + +D D +ILED
Sbjct: 85 NILGLAAMRGKPCVVVGTVYKDMKLKPNILDEFNARENYEAPPPERSKYFADDDVIILED 144
Query: 124 ELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
+ R L G + + V+GVV+A KG G+F+V++ C+
Sbjct: 145 QTGRTVLSGAGLPVGELVSGVVMAAKGVENDKGEFEVNECCF 186
>gi|297827879|ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
lyrata]
gi|297327661|gb|EFH58081.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 7 KSYTRPTADYKNLS-QCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
K + R +DY +L + F + + Y +Q++ IY VRL+ MR LL ++ W + V
Sbjct: 7 KIHERKHSDYNSLQDERFEIQKEMYRGQQYSQIYFVRLHLMR-TLLYSLAPTWKPHLPVC 65
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
K+ L + +ECVI+GTLFKH +LKP +L E S+E + P + +F+ D LILEDE
Sbjct: 66 KVLGLEKG--KECVIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDE 123
Query: 125 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
R+ L G+ + VTGVVVA+ G G+F V DV A + + ++KYV
Sbjct: 124 SGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQDDKYV 183
>gi|42569857|ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
Length = 441
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 7 KSYTRPTADYKNLS-QCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
K + R +DY +L + F + + Y +Q++ IY RL+ MR LL ++ W + V
Sbjct: 7 KIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMR-TLLYSLAPTWKSHLPVC 65
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDE 124
K+ L + +EC+I+GTLFKH +LKP +L E S+E + P + +F+ D LILEDE
Sbjct: 66 KVLGLEKG--KECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDE 123
Query: 125 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
R+ L G+ + VTGVVVA+ G G+F V DV A + + E+KYV
Sbjct: 124 SGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDKYV 183
>gi|384253871|gb|EIE27345.1| DNA polymerase delta small subunit like protein [Coccomyxa
subellipsoidea C-169]
Length = 396
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 45 MRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV 104
M L RV Q+W V V K+ DL E +E ++GTL+K +LKP+IL E ++E +
Sbjct: 1 MAPRLKQRVEQQW-PGVPVTKILDLPEN--QEVAVLGTLYKEMKLKPSILNEYNKERGIE 57
Query: 105 PQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
HT FVSD D L+LEDE R+ L G ID VTGV+ A++G NG+F V D+ +
Sbjct: 58 TLTGHTGFVSDDDSLVLEDESARMALRG-IDAGPLVTGVIAAVRGVSAANGEFHVKDMLF 116
Query: 165 ATPVFKPRTTLSN-NENKYVNHVDAFT 190
P +P+ L +KYV V +
Sbjct: 117 IGP--QPQQPLPEATGDKYVALVSGLS 141
>gi|324511905|gb|ADY44945.1| DNA polymerase delta small subunit [Ascaris suum]
Length = 451
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 10 TRPTADYKNLSQCFRLASKD-----YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
TR T DY+N+S F + KD + +QF H Y R + MR ++A +K+GK +
Sbjct: 5 TRGTLDYENVSTRFLINEKDLRDNCFQRQFFHAYRARASIMRPKIIAAAKEKFGKDIEPC 64
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILED 123
L+ + +IGT+ K +L+P++L++++EE ++P+P V+D D L ED
Sbjct: 65 GLT--KAVKSGSSFVIGTVEKRIKLRPSVLRDLAEEQLILPKPILEDRLVTDEDFLEFED 122
Query: 124 ELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP 171
E Q + L G ID+ + TG V+ ++GT + + F+V ++ + +P
Sbjct: 123 ENQIVHLTGAIDMDDVATGCVIGLRGTQLRDDIFRVDEIIWPKMAIQP 170
>gi|328768289|gb|EGF78336.1| hypothetical protein BATDEDRAFT_13201, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 434
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 18/186 (9%)
Query: 29 DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNE-----TDTEE---CVII 80
+Y+ Q+A +Y VRLN +R +LA ++W +VS + L + D + C II
Sbjct: 4 NYASQYASLYFVRLNLLRPRVLAAAQKRW-STVSCKQSDSLPQHVPRVVDVQTGVLCYII 62
Query: 81 GTLFKHQQLKPNILKEIS-EELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ 139
GT+F KPNIL E+S EE +P P++ +VS+ D ++LEDE RI L G+I I
Sbjct: 63 GTVFLDMSEKPNILDEVSREEWTALPTPKN-KYVSEKDAVLLEDESGRIVLTGDI-IKTT 120
Query: 140 V--TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRL 197
V TGV+ A+ G+ G+F+V DVCYA F P+ L + + +N + + +I L
Sbjct: 121 VFMTGVIAALLGSENQEGEFQVLDVCYA--AFDPQPPLPISTDSGINGCNIY--HPWIAL 176
Query: 198 WEGLFF 203
GL F
Sbjct: 177 VSGLNF 182
>gi|224139798|ref|XP_002323281.1| predicted protein [Populus trichocarpa]
gi|222867911|gb|EEF05042.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 21 QCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVI 79
+ F + ++ Y +Q++ IY RL+ MR L + V+ W V V + +L E +EC+I
Sbjct: 31 ETFEIQNETYRGQQYSQIYFARLHTMRTLLYSLVTH-WKPHVPVCTVLELEEG--KECII 87
Query: 80 IGTLFKHQQLKPNILKEISEEL--KLVPQPQHTHFVSDSDELILEDELQRIPLHGNI-DI 136
+GTL+KH +LKP IL E S+E +P + +F+ D L+LEDE R+ L G +
Sbjct: 88 VGTLYKHMKLKPCILDEYSKEACRSALPLVKPHNFMHPDDHLVLEDESGRVKLGGTVLSP 147
Query: 137 HNQVTGVVVAIKGTPVGNGKFKVSDVCYA--TPVFKPRTTLSNNENKYV 183
VTGVVVA+ G G G F V DV A P +P+ L + E+KYV
Sbjct: 148 SVYVTGVVVALHGKETGAGDFMVLDVLEAGLAPQIEPQ--LKSREDKYV 194
>gi|156088409|ref|XP_001611611.1| DNA polymerase alpha subunit B family protein [Babesia bovis]
gi|154798865|gb|EDO08043.1| DNA polymerase alpha subunit B family protein [Babesia bovis]
Length = 425
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 29/199 (14%)
Query: 10 TRPTADYKN-LSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----------- 57
TR A Y + LSQ FR+ YS Q+ +L ++R C + +W
Sbjct: 3 TREIAVYDDSLSQRFRIIGVPYSNQYYTYSMEKLERLRPCFFPLIESRWRDTIIDTTDSV 62
Query: 58 ---GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 114
G+ V V + D +CVIIGTL+K +L+P+ L+E SEELKL QP + S
Sbjct: 63 PKPGRYVYVPSIKDAKG----DCVIIGTLYKDMKLRPSPLEEYSEELKLR-QPMKAKYTS 117
Query: 115 DSDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP---VFK 170
D L +ED+ R+ + G+I D VTG+V+ +KG G+F+ D + P +
Sbjct: 118 PDDRLFIEDQSIRVAIRGSILDPQRLVTGLVICLKGRINDQGEFECEDYMHPGPPLMCLE 177
Query: 171 PRTTLSNNENKYVNHVDAF 189
PR+ E KYV V
Sbjct: 178 PRS-----EEKYVAFVSGL 191
>gi|307106804|gb|EFN55049.1| hypothetical protein CHLNCDRAFT_35821 [Chlorella variabilis]
Length = 468
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGT 82
F L ++DY +Q++ +Y RL +MR+ + W + V+ + L+ + E I GT
Sbjct: 52 FLLKNRDYDRQYSQLYYYRLEQMRKHAEEAAQRAW-PGIQVVHI--LSVPEEGEVAIAGT 108
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVT 141
L+K LKP+IL E ++ + Q F D LILEDE R+ L G+ + + VT
Sbjct: 109 LYKEMALKPSILDEYVKDRTMSQQLGRARFTQPDDRLILEDEGARLALCGDKLPVGECVT 168
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVDAFTDDD 193
GVV A++G + NG F+ D+CYA P+ L + E+KYV V D
Sbjct: 169 GVVAAVRGHVLPNGDFEALDLCYAG--LPPQAPLPAVGEDKYVALVSGLGVGD 219
>gi|301095643|ref|XP_002896921.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
gi|262108568|gb|EEY66620.1| DNA polymerase alpha/epsilon subunit B, putative [Phytophthora
infestans T30-4]
Length = 473
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL-KLSDLNETDTEECVIIGTLFKH 86
K Y++QF+HIY RL ++R+ + +V + + VL K+ DL + D +ECV+IGTL K
Sbjct: 41 KSYAQQFSHIYVSRLQQLRDVVSVQVQEHTAGRIPVLAKVIDL-KADGQECVLIGTLLKV 99
Query: 87 QQLKPNILKEISEELKLVP-QPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVV 145
+ KP+I ++ E + P + + DEL+LEDE R+ L GNID+ VTGVV+
Sbjct: 100 LEAKPDIFDALTSESGVKPIETIGRPLATKDDELLLEDESGRVQLVGNIDVARFVTGVVL 159
Query: 146 AIKGTPV---GNGKFKVSDVCYATPVFKPRTTL-SNNENKYVNHVDAF 189
++G +G F V +V P F P+ L E++YV V
Sbjct: 160 GVRGRVARDGPDGHFHVEEVYL--PSFPPQHPLPERQESEYVALVSGL 205
>gi|449437575|ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus]
gi|449526900|ref|XP_004170451.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus]
Length = 438
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 11 RPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R Y+ + +++ + Y +Q++HIY RL+ MR L + VS W + V + L
Sbjct: 11 RKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVS-NWKPHLPVSTVLGL 69
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIP 129
E +ECVI+GT++KH +LKP IL E S+E +P + +F+ D L+LEDE R+
Sbjct: 70 EEG--KECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVK 127
Query: 130 LHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYV 183
L G++ + + VTG+V+A+ G G F V D+ A + L ++E+KYV
Sbjct: 128 LSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYV 182
>gi|168040943|ref|XP_001772952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675685|gb|EDQ62177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDY-SKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
+++ + R A Y + Q + L+ + Y +Q++ +Y +R+ +R+ L + ++W S+
Sbjct: 4 DMDPATIPRLHAPYVSQDQKYGLSMQRYKGQQYSQLYFIRIVTIRQHLTPCIQERW-PSL 62
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
V + L E + CV+IGTL+K QLKP++L E S+E +VP F D LIL
Sbjct: 63 PVCNILALEED--KACVVIGTLYKQMQLKPSVLDEYSKERSVVPLASPNKFTHKDDYLIL 120
Query: 122 EDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNE- 179
EDE R+ L G+ + + VTGVVVAI G +G+F V DV A P+ L N++
Sbjct: 121 EDESGRVKLTGSAVLSSMYVTGVVVAIVGREEKDGEFFVEDVMVAG--LPPQKPLKNSDV 178
Query: 180 NKYVNHVDAF 189
+K+V V
Sbjct: 179 DKFVLFVSGL 188
>gi|340385463|ref|XP_003391229.1| PREDICTED: DNA polymerase delta subunit 2-like [Amphimedon
queenslandica]
Length = 506
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKS--------VSVLKLSDLNET------DTE--- 75
Q+ IY RL++M++ + +KWGK + L + ++T D E
Sbjct: 30 QYNQIYYTRLHEMKDVSMKSAQRKWGKKKGSHFYPHTATLHYTTGSDTVFRNLKDLEPGL 89
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
CV+IGTLFK L+P+ +K+IS+ +L+P P S +D++ LED QR+ L D
Sbjct: 90 ACVVIGTLFKEMSLRPSTIKQISDNQRLLPYPPKGKLSSSTDKIFLEDYSQRVILSNLSD 149
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFI 195
TG++VA+KG +G F+VSD C P L N+ + + +D ++
Sbjct: 150 NTALTTGMIVAVKGVQNADGNFEVSDYCL------PGMPLKNDP------LPSLNNDRYV 197
Query: 196 RLWEGLFFSMWMSDKPLIQK 215
+ GL SD+ IQ+
Sbjct: 198 AIVSGLMVGSDWSDQWAIQQ 217
>gi|392577101|gb|EIW70231.1| hypothetical protein TREMEDRAFT_68559 [Tremella mesenterica DSM
1558]
Length = 489
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 16/184 (8%)
Query: 11 RPTADYKNLSQC---FRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSV 63
RPT Y +L++ F L ++++Y Q+++IY VRL ++R + R +++WG +
Sbjct: 14 RPTTSYSSLTELSAPFLLDPSTRNYKHQYSNIYFVRLVELRPIVEERATERWGNIRGKPP 73
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED 123
L LN ++ C I+GT++ LKPNIL++++ + + P F S D + LED
Sbjct: 74 LLPRILNLQRSQLCYIVGTVYMEMPLKPNILEDMARDHWIAPPAPRPKFYSAQDAVHLED 133
Query: 124 ELQRIPLHG-------NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA--TPVFKPRTT 174
E R+ L G + + VTGV++A G +G F+V D+C+A V+KP
Sbjct: 134 ESGRVKLIGEKIKKERDREGGGLVTGVIMAALGMETSSGDFEVIDLCFAGMPDVYKPAAG 193
Query: 175 LSNN 178
SN
Sbjct: 194 PSNG 197
>gi|2673906|gb|AAB88640.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana]
Length = 456
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 16/190 (8%)
Query: 7 KSYTRPTADYKNLSQC---FRLASKDY---------SKQFAHIYAVRLNKMRECLLARVS 54
K + R +DY +L + +RL + +Q++ IY RL+ MR LL ++
Sbjct: 7 KIHERKQSDYNSLVRTLLLYRLVQDERFEIQKEMYRGQQYSQIYFARLHLMR-TLLYSLA 65
Query: 55 QKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 114
W + V K+ L + +EC+I+GTLFKH +LKP +L E S+E + P + +F+
Sbjct: 66 PTWKSHLPVCKVLGLEKG--KECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMH 123
Query: 115 DSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRT 173
D LILEDE R+ L G+ + VTGVVVA+ G G+F V DV A +
Sbjct: 124 PDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIER 183
Query: 174 TLSNNENKYV 183
+ E+KYV
Sbjct: 184 PIDLQEDKYV 193
>gi|336385426|gb|EGO26573.1| hypothetical protein SERLADRAFT_414551 [Serpula lacrymans var.
lacrymans S7.9]
Length = 515
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGT 82
+K Y QF++IY RL +R+ + R ++W GK V ++ D+ ++ C I+GT
Sbjct: 34 NKSYKHQFSNIYFTRLTMLRKAVEQRAEKRWKNVAGKPTYVRRVLDV--VKSQLCWIVGT 91
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVT 141
++ LKPN+L++I + + P P F SD D ++LEDE RI L G + + VT
Sbjct: 92 VYIDMPLKPNVLQDIGRDHSIAPPPPPVKFNSDKDVVMLEDESGRITLVGEKVKVACLVT 151
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYA 165
GV+VA+ G NG+F+ DV A
Sbjct: 152 GVIVAVLGVETLNGEFEAIDVSIA 175
>gi|254568372|ref|XP_002491296.1| DNA polymerase III (delta) subunit, essential for cell viability
[Komagataella pastoris GS115]
gi|238031093|emb|CAY69016.1| DNA polymerase III (delta) subunit, essential for cell viability
[Komagataella pastoris GS115]
Length = 461
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 2 KNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKS 60
+ + + R + K L +++Y +Q+A IY R NK++ L+ + S+KW G+
Sbjct: 5 QEVRRREVVRSSDSNKALLYTLNKNNRNYDRQYASIYTARANKLKPRLIEKCSEKWKGEK 64
Query: 61 VSVLKLSD----LNETDTEECVIIGTLFKHQQLKPNILKEISEEL---KLVPQPQHTHFV 113
++ + +S LN + + +GT+F + KPNILK++SE + +V + T+
Sbjct: 65 INGIPVSHTEKVLNISSNKATWCVGTVFCDLKYKPNILKDVSESMYGGPVVKKVDGTYAD 124
Query: 114 SDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
+SD+L+LEDE RI L G ID VTG +V + G + G F V D+ Y P +
Sbjct: 125 RESDQLMLEDESGRIALDGELIDKILLVTGCIVGVLGMEINPGVFTVVDIVYPEPGLQKP 184
Query: 173 TTLSNNENKYVNHVDAFTDD-DFIRL 197
LSN+ V+ + D+ D RL
Sbjct: 185 RLLSNHRIALVSGLGINGDNLDLSRL 210
>gi|328352186|emb|CCA38585.1| DNA polymerase delta subunit 2 [Komagataella pastoris CBS 7435]
Length = 459
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLK 65
+ R + K L +++Y +Q+A IY R NK++ L+ + S+KW G+ ++ +
Sbjct: 8 REVVRSSDSNKALLYTLNKNNRNYDRQYASIYTARANKLKPRLIEKCSEKWKGEKINGIP 67
Query: 66 LSD----LNETDTEECVIIGTLFKHQQLKPNILKEISEEL---KLVPQPQHTHFVSDSDE 118
+S LN + + +GT+F + KPNILK++SE + +V + T+ +SD+
Sbjct: 68 VSHTEKVLNISSNKATWCVGTVFCDLKYKPNILKDVSESMYGGPVVKKVDGTYADRESDQ 127
Query: 119 LILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN 177
L+LEDE RI L G ID VTG +V + G + G F V D+ Y P + LSN
Sbjct: 128 LMLEDESGRIALDGELIDKILLVTGCIVGVLGMEINPGVFTVVDIVYPEPGLQKPRLLSN 187
Query: 178 NENKYVNHVDAFTDD-DFIRL 197
+ V+ + D+ D RL
Sbjct: 188 HRIALVSGLGINGDNLDLSRL 208
>gi|392567417|gb|EIW60592.1| hypothetical protein TRAVEDRAFT_165502 [Trametes versicolor
FP-101664 SS1]
Length = 536
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 4 IECKSYTRPTADY----KNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-- 57
+ TRP++ ++ S + K Y Q+++IY VRL +R+ + R +W
Sbjct: 9 VPSAPRTRPSSAVIPPPEDASFIIKSTDKSYKHQYSNIYFVRLRALRQHVEQRAKGRWNE 68
Query: 58 --GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 115
G V V ++ D+ + + C IIGT++ LKPN+L++++ + L P F SD
Sbjct: 69 VAGNPVFVPRVLDVEKG--QLCFIIGTVYMDMPLKPNVLEDVARDRSLPAPPPREKFYSD 126
Query: 116 SDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
D ++LEDE RI L G+ I VTGV++ G NG F+V D+CY
Sbjct: 127 EDSIMLEDESGRICLVGDRIRSACLVTGVILGALGIETHNGDFEVVDLCY 176
>gi|58263352|ref|XP_569086.1| DNA polymerase Delta, small subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108624|ref|XP_776965.1| hypothetical protein CNBB4930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259648|gb|EAL22318.1| hypothetical protein CNBB4930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223736|gb|AAW41779.1| DNA polymerase Delta, small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 510
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 11 RPTADY---KNLSQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSV 63
RP A Y LS+ F + AS+ Y Q+A+IY VRL + R + + ++KW K
Sbjct: 15 RPAASYDPLTELSKPFTIDPASRSYKHQYANIYFVRLVEQRPAVEKKATEKWKDVKGNPP 74
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED 123
L LN T ++ C I+GT++ LKPNIL++++ + L T F S D + LED
Sbjct: 75 LLPRILNLTRSQLCYIVGTVYMEMPLKPNILEDMARDHWLAAPIPRTKFFSAQDSIHLED 134
Query: 124 ELQRIPLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
E R+ L G+ + VTGV++A G +G F+V D+C+A
Sbjct: 135 ESGRVRLIGDAIQRERDREGGGLVTGVIMAALGMETPSGDFEVIDICFA 183
>gi|336372615|gb|EGO00954.1| hypothetical protein SERLA73DRAFT_159552 [Serpula lacrymans var.
lacrymans S7.3]
Length = 543
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 30 YSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGTLFK 85
Y QF++IY RL +R+ + R ++W GK V ++ D+ ++ C I+GT++
Sbjct: 65 YKHQFSNIYFTRLTMLRKAVEQRAEKRWKNVAGKPTYVRRVLDV--VKSQLCWIVGTVYI 122
Query: 86 HQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVV 144
LKPN+L++I + + P P F SD D ++LEDE RI L G + + VTGV+
Sbjct: 123 DMPLKPNVLQDIGRDHSIAPPPPPVKFNSDKDVVMLEDESGRITLVGEKVKVACLVTGVI 182
Query: 145 VAIKGTPVGNGKFKVSDVCYA 165
VA+ G NG+F+ DV A
Sbjct: 183 VAVLGVETLNGEFEAIDVSIA 203
>gi|330801695|ref|XP_003288860.1| hypothetical protein DICPUDRAFT_153145 [Dictyostelium purpureum]
gi|325081106|gb|EGC34635.1| hypothetical protein DICPUDRAFT_153145 [Dictyostelium purpureum]
Length = 526
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 97/171 (56%), Gaps = 15/171 (8%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPN 92
Q+ IY+ RL K+R L+ +V K+ +V V K+ + D ECV+IGTL+K +LKPN
Sbjct: 105 QYNTIYSSRLEKLRPVLMEQVESKFS-NVPVQKILQMKPGD--ECVMIGTLYKEMELKPN 161
Query: 93 ILKEISEELKLVPQPQHTH-FVSDSDELILEDELQRIPLHGNID-IHNQVTGVVVAIKGT 150
ILK+ +++ ++P P + F+S+ D+L ED+ R+ L G + + VTG+ VAI+G
Sbjct: 162 ILKQYAQDRAMLPLPDNRESFISEKDKLFFEDDTGRVKLIGEKGMVDSLVTGLNVAIRGR 221
Query: 151 PVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
+ + +F++ +V + P P+ + ++ DD +I L G+
Sbjct: 222 GLTDAEFEIQEVLF--PGLPPQ--------PHSRDLEKIKDDVYICLVSGI 262
>gi|391335034|ref|XP_003741902.1| PREDICTED: DNA polymerase delta subunit 2-like [Metaseiulus
occidentalis]
Length = 450
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS 62
+ E K ++R D+K+LS F L ++D+ Q+A++Y R + L RV ++WG S
Sbjct: 7 DFEEKEFSRTKCDFKSLSTRFELCTRDFRMQYANLYKKRYERCLPALRKRVDEEWGSSKC 66
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL----KLVPQPQHTHFVSDSDE 118
++ N + +++GTLFK +P+IL+EISE++ + +P +F SD DE
Sbjct: 67 PIE-EVCNLKCGVQTIVMGTLFKTMPKQPSILREISEDIPEDAECTVEPTD-NFTSDEDE 124
Query: 119 LILEDELQRIPLHGN--IDIHNQVTGVVVAIKGT-PVGNGKFKVSDVCY 164
L+LED QR+ + + + H VTGV +A+ G + F V DV Y
Sbjct: 125 LVLEDLRQRVAIRSSDLLSPHKLVTGVPIALMGAVDEEDAHFVVKDVLY 173
>gi|71021785|ref|XP_761123.1| hypothetical protein UM04976.1 [Ustilago maydis 521]
gi|46100573|gb|EAK85806.1| hypothetical protein UM04976.1 [Ustilago maydis 521]
Length = 510
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 43/241 (17%)
Query: 3 NIECKSYTRPT--ADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW- 57
IE ++ P+ A LS+ F L S+ YSKQ+A +Y RL +++ +LAR +W
Sbjct: 4 TIERQTVAPPSDEATASELSKAFLMPLGSRSYSKQYAQLYDYRLAYLKKRVLARAKSRWI 63
Query: 58 ----------------------GKSVSVLKLSD--------LNETDTEECVIIGTLFKHQ 87
G S + +++ + L+ + C ++G L+
Sbjct: 64 DNFDSFFQSQSQPLSQLDSSDAGPSSNTVRMDEPPKFVDRILDVRQGDICYVVGNLYCAM 123
Query: 88 QLKPNILKEISEELKLVPQPQHTHFVSDS-DELILEDELQRIPL-----HGNIDIHNQ-V 140
LKP++L++++ E L PQP + +V + DEL +ED+ R+ L G + + +
Sbjct: 124 PLKPDVLEDLTREQWLAPQPVRSKYVDYAKDELFIEDQSGRVKLVGEAIRGGTALRSMLI 183
Query: 141 TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEG 200
TGVV A+ GT G F V D +A+ +P T S + H DA + D ++ L G
Sbjct: 184 TGVVAAVLGTETRAGDFDVVDAVFASLPNQPSTKKSLQDPSRTKHADA-SQDQWVVLMSG 242
Query: 201 L 201
L
Sbjct: 243 L 243
>gi|83282443|ref|XP_729773.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23488516|gb|EAA21338.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 485
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 49/225 (21%)
Query: 15 DYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECL---LARVSQKWGKSVSVLKLSDLNE 71
+Y+N S F L + Y++QF+ IY++R+N MR+ L L R++ + G ++ E
Sbjct: 43 NYENHSNNFILTNPTYTQQFSSIYSIRINIMRKLLMKTLERLNVEMGDDSKGAIKQEIEE 102
Query: 72 TDT-------------------------------EECVIIGTLFKHQQLKPNILKEISEE 100
++ E+C IGT+FK L+P+ILKE E
Sbjct: 103 AESGEIERGESGQGKKGERGQGKVLQYLKDIKINEKCYCIGTIFKKMDLRPSILKEYISE 162
Query: 101 LKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVS 160
++ + ++ D D L LEDE R+ L GNI+ + VTG+ + IKG + NG V
Sbjct: 163 IEYLDD-TVINYSQDQDILFLEDETARLKLEGNINSDHYVTGLTIIIKGVGMSNGSLYVE 221
Query: 161 DVCYA-TPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
+V Y+ P + +SN DD +I GL+ S
Sbjct: 222 EVIYSYLPKLEIPKCISN-------------DDKYILFVSGLYIS 253
>gi|68066984|ref|XP_675463.1| DNA polymerase delta small subunit [Plasmodium berghei strain ANKA]
gi|56494663|emb|CAH94472.1| DNA polymerase delta small subunit, putative [Plasmodium berghei]
Length = 477
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 43/218 (19%)
Query: 15 DYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQ------------------- 55
+Y+N S F L + Y++QF+ IY +R+N MR+ L+ + +
Sbjct: 43 NYENNSNNFILTNPTYTQQFSSIYNIRINIMRKLLMKTIEKLNVGISDDSKGIIKQEVKE 102
Query: 56 -------KWGKSVSVLKLSDLNETD-TEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 107
K G++ V L L + E+C IGT+FK L+P+ILKE EL +
Sbjct: 103 PENGQKSKGGENEQVKVLQYLKDIKINEKCYCIGTIFKKMDLRPSILKEYISELDYLDT- 161
Query: 108 QHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-T 166
++ D L LEDE R+ L GNI+ N VTG+ + IKG + NG V ++ Y+
Sbjct: 162 -VINYSQYQDILFLEDETARLKLEGNINSDNYVTGLTIIIKGVGMSNGSLYVEELIYSYL 220
Query: 167 PVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
P + +SN DD +I GL+ S
Sbjct: 221 PKIEIPKCISN-------------DDKYILFVSGLYIS 245
>gi|405118300|gb|AFR93074.1| DNA polymerase Delta [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 11 RPTADY---KNLSQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSV 63
R T Y LS+ F + AS+ Y Q+A+IY VRL + R + + ++KW K
Sbjct: 15 RSTPSYDPLAGLSKPFTIDPASRSYKHQYANIYFVRLVEQRPTVEEKATEKWKDVKGHPP 74
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED 123
L LN T ++ C I+GT++ LKPNIL++++ + L T F S D + LED
Sbjct: 75 LLPRILNLTRSQLCYIVGTIYMEMPLKPNILEDMARDHWLAAPIPRTKFFSAQDSIHLED 134
Query: 124 ELQRIPLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
E R+ L G++ + VTGV++A G +G F+V D+C+A
Sbjct: 135 ESGRVRLIGDVIQRERDREGGGLVTGVIMAALGMETPSGDFEVIDICFA 183
>gi|237837865|ref|XP_002368230.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
ME49]
gi|211965894|gb|EEB01090.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
ME49]
gi|221509002|gb|EEE34571.1| DNA polymerase delta small subunit, putative [Toxoplasma gondii
VEG]
Length = 492
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 37/197 (18%)
Query: 8 SYTRPTADYKNL-SQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+ R ADY++ S F + ++ Y +Q++ +Y RL + L + +W +
Sbjct: 107 GFLRAVADYEDRGSDRFVVRTRKYQQQYSAVYYSRLAALSGTLFKQAENRWPGLCIHPCI 166
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
D+ +ECVI+GTLFK LKP++LKE +++++ P F+SDSD L LED+
Sbjct: 167 RDMQTG--QECVIVGTLFKDMVLKPSVLKEYLDDIQVQATP--NSFLSDSDALFLEDQTA 222
Query: 127 RI-------------------------------PLHGNIDIHNQVTGVVVAIKGTPVGNG 155
R+ P + ++ VTG+VVA++G NG
Sbjct: 223 RVRLVVDAASSSSAEENGENAEETDALADAGEQPEKQKLRVNGVVTGLVVAVRGVATDNG 282
Query: 156 KFKVSDVCY-ATPVFKP 171
+F V D C P F P
Sbjct: 283 RFLVRDFCLGGAPAFPP 299
>gi|395333295|gb|EJF65672.1| hypothetical protein DICSQDRAFT_165382 [Dichomitus squalens
LYAD-421 SS1]
Length = 520
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 20 SQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETD 73
S F + S D Y Q+++IY VRL +R+ + + +KW G V V ++ D+ +
Sbjct: 27 SASFLIGSNDKSYRHQYSNIYFVRLRALRQHVEQQAQRKWSGVAGNPVFVPRVLDVEKG- 85
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
+ C +IGT++ LKPN+L++I+ + + P + SDSD + LEDE RI L G+
Sbjct: 86 -KLCFVIGTVYMEMPLKPNVLEDIARDRSIPAPPPREKYYSDSDSVTLEDESGRICLVGS 144
Query: 134 -IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLS------NNENKYVNHV 186
+ VTGV++ G G F+V D+CY +P L ++E V+
Sbjct: 145 RVTSTCLVTGVILGALGIETHTGDFEVVDLCYPGMAPQPTAGLEWPSWKVSDEIMDVDGT 204
Query: 187 DAFTDDDFIRLWEGL 201
D+ I L GL
Sbjct: 205 APQVSDECIALVSGL 219
>gi|321252422|ref|XP_003192401.1| DNA polymerase delta, small subunit [Cryptococcus gattii WM276]
gi|317458869|gb|ADV20614.1| DNA polymerase delta, small subunit, putative [Cryptococcus gattii
WM276]
Length = 508
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 14/175 (8%)
Query: 5 ECKSYTRPTADYK---NLSQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG- 58
E RP Y LS+ F + AS+ Y Q+A+IY VRL + R + + +KW
Sbjct: 9 EGSPSLRPAPSYDPLIELSKPFTIDPASRSYKHQYANIYFVRLVEQRPTVEEKAREKWKN 68
Query: 59 -KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD 117
K L LN T ++ C I+GT++ LKPNIL++++ + L T F S D
Sbjct: 69 VKGHPPLLPRILNLTRSQLCYIVGTIYMEMPLKPNILEDMARDHWLSAPIPRTKFFSAQD 128
Query: 118 ELILEDELQRIPLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
+ LEDE R+ L G++ + VTGV++A G +G F+V D+C+A
Sbjct: 129 SVHLEDESGRVRLIGDVIQKERDREGGGLVTGVIMAALGMETPSGDFEVIDICFA 183
>gi|390594258|gb|EIN03671.1| hypothetical protein PUNSTDRAFT_139385 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 522
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNE 71
YK S +++ Y Q+A+IY VRL +R+ + R ++W G V V ++ D+
Sbjct: 28 YKPPSFTINASNRSYKHQYANIYFVRLRMLRKFVEDRAQKRWEGIAGSPVLVPRVLDV-- 85
Query: 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH 131
++ C I+GT++ LKPN+L++I + P F S++D ++LEDE R+ L
Sbjct: 86 VKSQLCYIVGTVYMDMPLKPNVLEDIGRHHSIPVPPPREKFYSETDCVMLEDESGRVRLV 145
Query: 132 GN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
G + VTGV++ G G F+V D+CYA
Sbjct: 146 GKAVTEAGLVTGVILGALGIETPGGDFEVVDLCYA 180
>gi|221488496|gb|EEE26710.1| NBP2B protein, putative [Toxoplasma gondii GT1]
Length = 503
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 37/197 (18%)
Query: 8 SYTRPTADYKNL-SQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+ R ADY++ S F + ++ Y +Q++ +Y RL + L + +W +
Sbjct: 107 GFLRAVADYEDRGSDRFVVRTRKYQQQYSAVYYSRLAALSGTLFKQAENRWPGLCIHPCI 166
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
D+ +ECVI+GTLFK LKP++LKE +++++ P F+SDSD L LED+
Sbjct: 167 RDMQTG--QECVIVGTLFKDMVLKPSVLKEYLDDIQVQATP--NSFLSDSDALFLEDQTA 222
Query: 127 RI-------------------------------PLHGNIDIHNQVTGVVVAIKGTPVGNG 155
R+ P + ++ VTG+VVA++G NG
Sbjct: 223 RVRLVVDAASSSSAEENGETAEETDALADAGEQPEKQKLRVNGVVTGLVVAVRGVATDNG 282
Query: 156 KFKVSDVCY-ATPVFKP 171
+F V D C P F P
Sbjct: 283 RFLVRDFCLGGAPAFPP 299
>gi|242223029|ref|XP_002477193.1| predicted protein [Postia placenta Mad-698-R]
gi|220723408|gb|EED77603.1| predicted protein [Postia placenta Mad-698-R]
Length = 503
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 9/162 (5%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIG 81
A++ Y Q++ IY VRL +R+ ++AR ++W G+ + V ++ D+ + +IG
Sbjct: 29 ANRSYKHQYSSIYYVRLQVLRKYVMARARRRWHDVAGRPIYVGRVLDV--IKGQLSYVIG 86
Query: 82 TLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHG-NIDIHNQ 139
T++ +KPN+L++++ + L P P+ T + S D+ +LEDE RI L G I
Sbjct: 87 TVYMDMPMKPNVLEDLARDHSLPAPAPRMT-YCSQDDQPMLEDESGRIALVGERIRSARL 145
Query: 140 VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
VTGVV+ I G G+F+V D+C A +P + L+ E+
Sbjct: 146 VTGVVLGILGIETSGGEFEVVDICTAGMAPQPYSDLNWGESS 187
>gi|302779876|ref|XP_002971713.1| hypothetical protein SELMODRAFT_441552 [Selaginella moellendorffii]
gi|300160845|gb|EFJ27462.1| hypothetical protein SELMODRAFT_441552 [Selaginella moellendorffii]
Length = 427
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
YTR D++ Q ++ +Q++H+Y RL+K+R +L+ + Q V V +
Sbjct: 16 YTRKDEDFERRVQRYK------GQQYSHLYYCRLHKLRG-VLSSLVQSGFPGVPVCPI-- 66
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L D + CV+IGT++K +LKP+IL E ++E +P ++F+ D L+LEDE R+
Sbjct: 67 LGLEDGKRCVVIGTIYKQMKLKPSILDEYAKERSKLPLATASNFMHPDDYLVLEDESGRV 126
Query: 129 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 162
L G++ + N VTG+V+A G +G F V ++
Sbjct: 127 KLVGSVVVPSNYVTGIVIAACGAAGKDGDFFVQEI 161
>gi|302819832|ref|XP_002991585.1| hypothetical protein SELMODRAFT_429905 [Selaginella moellendorffii]
gi|300140618|gb|EFJ07339.1| hypothetical protein SELMODRAFT_429905 [Selaginella moellendorffii]
Length = 448
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD 68
YTR D++ Q ++ +Q++H+Y RL+K+R L + V Q V V +
Sbjct: 21 YTRKDEDFERRVQRYK------GQQYSHLYYCRLHKLRGALSSLV-QSGFPGVPVCPI-- 71
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L D + CV+IGT++K +LKP+IL E ++E +P ++F+ D L+LEDE R+
Sbjct: 72 LGLEDGKRCVVIGTIYKQMKLKPSILDEYAKERSKLPLATASNFMHPDDYLVLEDESGRV 131
Query: 129 PLHGNIDI-HNQVTGVVVAIKGTPVGNGKFKVSDV 162
L G++ + N VTG+V+A G +G F V ++
Sbjct: 132 KLVGSVVVPSNYVTGIVIAACGAAGKDGDFFVQEI 166
>gi|299753847|ref|XP_001833575.2| DNA polymerase subunit delta-2 [Coprinopsis cinerea okayama7#130]
gi|298410490|gb|EAU88120.2| DNA polymerase subunit delta-2 [Coprinopsis cinerea okayama7#130]
Length = 537
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGT 82
+K Y Q+++IY +RL +RE + ++W G V ++ L T C IIGT
Sbjct: 24 NKSYKHQYSNIYFIRLRLLREHVEKNAQKRWKNINGNPRLVPRV--LEVTKGNLCYIIGT 81
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVT 141
++ LKPN++++++ + + P F S +D+++LEDE RI L G+ + VT
Sbjct: 82 VYMEMPLKPNVMEDLTRDRSIQAPPPPAKFYSPTDKVMLEDESGRIHLVGDCLADKRLVT 141
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKPR-TTLSNNENKYVNHVDAFTDDDFIRLWEG 200
GV++A G NG+F+V D+C A F P+ ++L+ +E+ + D +I + G
Sbjct: 142 GVIIAALGMETPNGEFEVVDICTAG--FPPQPSSLAQDEDVEMEVDTESQPDSWIAIASG 199
Query: 201 L 201
L
Sbjct: 200 L 200
>gi|449547653|gb|EMD38621.1| hypothetical protein CERSUDRAFT_123186 [Ceriporiopsis subvermispora
B]
Length = 527
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS----VLKLSDLNETDTEECVIIG 81
A+K Y Q+++IY VRL ++ + + ++WG V ++ D+N+ + C IIG
Sbjct: 38 ANKSYKHQYSNIYFVRLRLLQSYVEEQARRRWGSIAGNPTYVPRVLDVNKG--QLCFIIG 95
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQV 140
T++ LKPN+L+++ + L + S+ D+++LEDE R+ L GN + V
Sbjct: 96 TVYMDMPLKPNVLEDLGRDHSLPAPAPRAKYNSEEDKVMLEDESGRLCLVGNRVRDTPLV 155
Query: 141 TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLS--NNENKYVNHVDAFTDDDFIRLW 198
TGVV+ G G F+V D+C+A +P + L + + ++++ D + D+++ +
Sbjct: 156 TGVVLGALGMETAGGDFEVVDLCFAGIAPQPSSGLPQRDTDAEHMDVDDQESSDEWVAIV 215
Query: 199 EGL 201
GL
Sbjct: 216 SGL 218
>gi|66812748|ref|XP_640553.1| DNA polymerase delta subunit 2 [Dictyostelium discoideum AX4]
gi|60468579|gb|EAL66582.1| DNA polymerase delta subunit 2 [Dictyostelium discoideum AX4]
Length = 521
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPN 92
Q++ IYA RL K+ L+ V K+ + K+ + D EC++IGTL+K +LKPN
Sbjct: 102 QYSSIYASRLEKLNPILVENVESKY-PGIPTQKILHMKPGD--ECIMIGTLYKEMELKPN 158
Query: 93 ILKEISEELKLVPQPQHTH-FVSDSDELILEDELQRIPLHGNID-IHNQVTGVVVAIKGT 150
ILK +++ ++P P + F+ + D+L ED R+ L G+ + + + VTG+ VAI G
Sbjct: 159 ILKAYAQDRAMLPIPDNRESFIGEKDKLFFEDNTGRVKLIGSKEMVDSLVTGLNVAILGK 218
Query: 151 PVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
+ + +F+V D+ + P P+ + +++ DD +I L GL
Sbjct: 219 GLPDAEFEVRDIVF--PGIPPQ--------PHSRDLESLKDDAYICLISGL 259
>gi|414864556|tpg|DAA43113.1| TPA: hypothetical protein ZEAMMB73_615392 [Zea mays]
Length = 426
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
L + ++C+I+GTL+KH +LKP+IL E ++E +P + +F+ D LILEDE R+
Sbjct: 56 LGLEEGKDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDESGRV 115
Query: 129 PLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN-NENKYVNHVD 187
L G I VTGVVVA+ G G F V DV A P++ LS+ E+KYV +
Sbjct: 116 TLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAG--LPPQSALSSAEEDKYVVFIS 173
Query: 188 AFT 190
+
Sbjct: 174 GLS 176
>gi|443894116|dbj|GAC71466.1| mitochondrial polypeptide chain release factor [Pseudozyma
antarctica T-34]
Length = 500
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 46/216 (21%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-----------------------GKSV 61
L S+ YSKQ+A +Y RL +++ +L R +W G S
Sbjct: 30 LGSRSYSKQYAQLYDYRLAYLKKRILPRAKARWVDNFEAFSQSQSQPASQLDTSDAGPSS 89
Query: 62 SVLKLSD--------LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV 113
L++ D L+ + C ++G ++ LKP++L++++ E L PQP +V
Sbjct: 90 PRLRMQDPPKLVDRILDVRHGDICYVVGNIYCAMPLKPDVLEDLTREQWLAPQPVRAKYV 149
Query: 114 S-DSDELILEDELQRIPLHGNIDIHNQ------VTGVVVAIKGTPVGNGKFKVSDVCYAT 166
+ DEL +ED+ R+ L G+ +TGVV A+ GT G F V D +A+
Sbjct: 150 DYEKDELFIEDQSGRVKLVGDAIRSGGPLRSMLITGVVAAVLGTETRTGNFDVVDAVFAS 209
Query: 167 -PVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
PV +P +S+ + A DD ++ L G+
Sbjct: 210 LPVLQPAAPISHKKA-------AAGDDQWVVLMSGM 238
>gi|303282229|ref|XP_003060406.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457877|gb|EEH55175.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 466
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R T Y F L +K Y + F +Y RL + L V KW ++ K+ DL
Sbjct: 17 RATLPYVARDSKFNLDAKIYGQYF-QLYFNRLKILAPRLEDAVQAKW-PNLPRAKVLDLK 74
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKE------ISEELKLVPQPQHTHFVSDSDELILEDE 124
E EECV+ GTL+K +LKP IL E +S + + T FV + D ++LEDE
Sbjct: 75 EG--EECVLSGTLYKDMKLKPCILDEYVKEAGVSASAVAIEDSKKTKFVGEDDSIVLEDE 132
Query: 125 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
R+ L G ID++ VTGVV+A +G V G+F+ ++C+
Sbjct: 133 GARVKLTGAAIDVNALVTGVVLAARGRVVPGGEFEADEICF 173
>gi|302692486|ref|XP_003035922.1| hypothetical protein SCHCODRAFT_84485 [Schizophyllum commune H4-8]
gi|300109618|gb|EFJ01020.1| hypothetical protein SCHCODRAFT_84485 [Schizophyllum commune H4-8]
Length = 504
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGTL 83
K + KQ+A+IY +RL+ +R+ ++ +KW G V + ++ L + + C ++GT+
Sbjct: 34 KSFHKQYANIYYLRLHSLRDAVIENAQRKWKDLDGSPVHIPRV--LEVSKAKLCYVVGTV 91
Query: 84 FKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG-NIDIHNQVTG 142
+ LKP+++++I+ + + P P S D ++LEDE RI L G + VTG
Sbjct: 92 YMEMPLKPSVMEDIARDHSIAPPPPPPKICSKEDHVMLEDESGRIRLVGARVTAAPLVTG 151
Query: 143 VVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
V++ G NG F+V D+CYA P T ++ V+ +D ++ GL
Sbjct: 152 VIIGALGVETPNGDFEVVDICYAE---MPPPTYPKEDDSAAMEVEE--EDSYVAFVSGL 205
>gi|349579196|dbj|GAA24359.1| K7_Hys2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 487
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L ++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYDSQYYHIYQYRLKTFRERILKECDKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +GT++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGTIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|171692853|ref|XP_001911351.1| hypothetical protein [Podospora anserina S mat+]
gi|170946375|emb|CAP73176.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 15/207 (7%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SV 63
R ++YK+L+ ++ Y +QFA IY +RL K++ + + W +V V
Sbjct: 28 RAPSNYKSLNTFALPKARQYQQQFADIYFLRLTKIKPAVEQIAHEAWDDTVLGGENAKKV 87
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELIL 121
++ D+ + E C + GT++ LKP+IL+++S++ + H+ S+ D+++L
Sbjct: 88 ERVLDVRQ--GELCWVAGTVYMDMPLKPSILEDVSKDRWISAPTSVGHYYSEDGKDQVML 145
Query: 122 EDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNE 179
ED+ RI L G + + VTG ++A+ GT NG+F+V D+ +A P PR LS+ +
Sbjct: 146 EDDSGRIRLVGEPLKNYFLVTGCIIAVMGTENANGEFEVIDLKFADLPPQPPRWALSDKK 205
Query: 180 NKY--VNHVDAFTDDDFIRLWEGLFFS 204
K V+ VD + I + GL FS
Sbjct: 206 PKSEDVSMVDVGSPSKKIAIISGLEFS 232
>gi|343425859|emb|CBQ69392.1| related to HYS2-DNA-directed DNA polymerase delta, 55 KD subunit
[Sporisorium reilianum SRZ2]
Length = 506
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 48/245 (19%)
Query: 3 NIECKSYTRPT--ADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW- 57
IE +S P+ A LS+ F L S+ YSKQ+A +Y RL +++ +L R +W
Sbjct: 4 TIERQSVAPPSDAATASELSKAFLAPLGSRSYSKQYAQLYDYRLAYLKKRILPRAKSRWI 63
Query: 58 ----------------------GKSVS------------VLKLSDLNETDTEECVIIGTL 83
G S + V ++ D+ + D C ++G +
Sbjct: 64 DNFDAFSQSQSQPLSQLDSSDAGPSSADARVRMQDPPKFVDRILDVRQGDI--CYVVGNV 121
Query: 84 FKHQQLKPNILKEISEELKLVPQPQHTHFVSDS-DELILEDELQRIPL-----HGNIDIH 137
+ LKP++L++++ E L PQP + FV + DEL +ED+ R+ L G +
Sbjct: 122 YCAMPLKPDVLEDLTREQWLAPQPVRSKFVDYAKDELFIEDQSGRVKLVGDAIRGGTALR 181
Query: 138 NQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIR 196
+ +TGVV A+ GT G F V D +A+ P L+ EN ++ D ++
Sbjct: 182 SMLITGVVAAVLGTETRAGDFDVVDAVFASLPPAPSKPLTKAENGTSAKHESSAKDQWVV 241
Query: 197 LWEGL 201
L GL
Sbjct: 242 LMSGL 246
>gi|225709974|gb|ACO10833.1| DNA polymerase subunit delta-2 [Caligus rogercresseyi]
Length = 436
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 15 DYKNLSQCFRLAS-KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD 73
DY NLS+ F S K+YS Q+ H+Y R ++ + A G + +LS+L+
Sbjct: 30 DYSNLSERFLYPSGKNYSIQYYHVYRSRFAALKPLVEASARSSLGPKAPIKRLSELSSGV 89
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
T+ ++IGTL+K Q+ KPNIL+++ E QP ++ S DELILEDE QRI L G+
Sbjct: 90 TDTVLLIGTLYKLQKNKPNILRQLEGE----EQPSRGNYTSSEDELILEDEEQRIKLVGD 145
Query: 134 -IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
I+ VTG+++ + G +GKF V + Y
Sbjct: 146 GINKETLVTGIILGVYGRQSQSGKFTVEKIFY 177
>gi|401624997|gb|EJS43023.1| hys2p [Saccharomyces arboricola H-6]
Length = 490
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 17 KNLSQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD- 68
+N S F+L KD Y+ Q+ H+Y RL RE +L ++W + VLK +
Sbjct: 34 RNESNPFQLCYKDRNYASQYYHMYQYRLKTFRERVLEECDKRWDAGFTLNGKLVLKKNKV 93
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQ 126
L+ + C IG+++ + KPN+L E+ + P +T SDE++LEDE
Sbjct: 94 LDIQGHQPCWCIGSIYCEMKYKPNVLDEVINDTYGAPDLAKSYTDKEGGSDEIMLEDESG 153
Query: 127 RIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
R+ L G+ I +TGVVV I G G F+V D+CY TP+ +
Sbjct: 154 RVLLVGDFIRSAPFITGVVVGILGMEADAGTFQVLDICYPTPLLQ 198
>gi|23306120|gb|AAN17387.1| Putataive DNA polymerase delta small subunit [Oryza sativa Japonica
Group]
Length = 404
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 31 SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 90
+Q++HIY RL+ MR L A V W + V + L E ++C+I+GTL+KH +LK
Sbjct: 20 GQQYSHIYFTRLHHMRNLLHALVP-SWKPHLPVTTVLGLEEG--KDCIIVGTLYKHMKLK 76
Query: 91 PNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTG---VVVAI 147
P+IL E S+E +P + +F+ D LILEDE R+ L G I VT VV +
Sbjct: 77 PSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTLAGAIPPAAYVTDEDKYVVFV 136
Query: 148 KGTPVGNGKF 157
G +G+ KF
Sbjct: 137 SGLSIGSEKF 146
>gi|392595944|gb|EIW85267.1| hypothetical protein CONPUDRAFT_141916 [Coniophora puteana
RWD-64-598 SS2]
Length = 517
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGTL 83
K Y Q+++IY RL +R + R KW G + V ++ D+ ++ C IIGT+
Sbjct: 30 KSYRHQYSNIYFTRLAMLRGAVEERAKNKWKDVDGSPLFVERVLDV--VKSQLCWIIGTV 87
Query: 84 FKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ-VT 141
+ LKPN+L+++S + P P+ F S +D +++ED RI L G ++ VT
Sbjct: 88 YIDMPLKPNVLEDLSRNHSIPAPNPRE-KFYSSNDSVMIEDSSGRIKLVGAAVTKSRLVT 146
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
GV+VA G G F+V D+C+A SN+E V+ D+ D+++ GL
Sbjct: 147 GVIVAALGMETDKGDFEVVDLCFADLAPFAEEAPSNDETMDVD--DSSQPDEYVAAISGL 204
Query: 202 FFSMWMSDKPLIQ 214
F +S IQ
Sbjct: 205 SFGSPVSADSQIQ 217
>gi|151945082|gb|EDN63333.1| DNA polymerase delta subunit [Saccharomyces cerevisiae YJM789]
gi|190409493|gb|EDV12758.1| DNA polymerase delta subunit [Saccharomyces cerevisiae RM11-1a]
gi|207343903|gb|EDZ71219.1| YJR006Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 487
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L +++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERILKECNKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|256270211|gb|EEU05433.1| Pol31p [Saccharomyces cerevisiae JAY291]
Length = 487
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L ++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERILKECDKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +GT++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGTIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVV+ I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVLGILGMEAEAGTFQVLDICYPTPL 196
>gi|290771209|emb|CBK33737.1| Pol31p [Saccharomyces cerevisiae EC1118]
gi|323347911|gb|EGA82171.1| Pol31p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764809|gb|EHN06329.1| Pol31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 487
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L ++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERILKECDKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|403214436|emb|CCK68937.1| hypothetical protein KNAG_0B05030 [Kazachstania naganishii CBS
8797]
Length = 477
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS------VSVLKLSDLNETDTEE 76
+ A +DYS QF H+Y RLN +RE ++ KW + V K L+ E
Sbjct: 37 LKWADRDYSSQFYHMYQYRLNVLRERVVKECKDKWDNGFKLNGRLVVQKEKVLDIQGREP 96
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELILEDELQRIPLHGN-I 134
C +GT++ + KPNIL+E+ + VP ++ DE++LEDE R+ L G I
Sbjct: 97 CWCVGTIYCEMKYKPNILEEVVNDTYGVPDLVKSYTDPQGEDEIMLEDESGRVILVGEYI 156
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 166
+TG VV I G G F+V D+CY +
Sbjct: 157 RTTPFITGTVVGILGMEADPGTFQVLDICYPS 188
>gi|1256943|dbj|BAA08859.1| HYS2 [Saccharomyces cerevisiae]
Length = 487
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L ++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERVLKECDKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VHLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|402583229|gb|EJW77173.1| hypothetical protein WUBG_11918 [Wuchereria bancrofti]
Length = 393
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 11 RPTADYKNLSQCFRLASKD-----YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
R A Y+NLS + + KD + +Q+ HIY R+ ++ ++ G + +
Sbjct: 6 RRPAQYQNLSIKYIIGKKDLEAECFHRQYYHIYRARIKLLKNRIIDNAKLLLGDGIEPCR 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDE 124
L+ + D E ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+
Sbjct: 66 LTKAKKDD--EVLVIGTITKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDD 123
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
Q + L G+ + TG VV I G + N F+VS + + + +P + N+ ++Y+
Sbjct: 124 DQIVRLSGDFVMDEVATGCVVGIYGRQLDNDIFQVSKMIWPSKAPQPTYPILND-DRYIA 182
Query: 185 HVDAFT 190
V F+
Sbjct: 183 FVSGFS 188
>gi|116198135|ref|XP_001224879.1| hypothetical protein CHGG_07223 [Chaetomium globosum CBS 148.51]
gi|88178502|gb|EAQ85970.1| hypothetical protein CHGG_07223 [Chaetomium globosum CBS 148.51]
Length = 497
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 13/190 (6%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV- 61
N S RP ++YK+L + Y +QFA IY +RL K+R + + W +V
Sbjct: 18 NTPTASLERPESNYKSLGNFSLPNDRQYKQQFADIYFLRLTKIRPAVEEVATAAWQDTVL 77
Query: 62 ------SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-- 113
V ++ D+ + + C +IGT++ LKP++L+++S++ + H+
Sbjct: 78 GGETATKVDRVLDVRQ--GQLCWVIGTVYMEMPLKPSVLEDVSKDRWISAPTMADHYYDG 135
Query: 114 SDSDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP- 171
+ ++ ++LED+ R+PL G++ + VTG ++A+ GT +G+F+V D+ +A +P
Sbjct: 136 AGAESIMLEDDSGRVPLVGSVLKDYFLVTGCIIAVMGTENSDGQFEVIDLKFADLPSQPG 195
Query: 172 RTTLSNNENK 181
R +LS K
Sbjct: 196 RWSLSKGPKK 205
>gi|6322465|ref|NP_012539.1| Pol31p [Saccharomyces cerevisiae S288c]
gi|1170421|sp|P46957.1|DPOD2_YEAST RecName: Full=DNA polymerase delta small subunit; AltName:
Full=Hydroxyurea-sensitive protein 2
gi|854579|emb|CAA60928.1| ORF YJR83.7 [Saccharomyces cerevisiae]
gi|1015630|emb|CAA89528.1| HUS2 [Saccharomyces cerevisiae]
gi|285812899|tpg|DAA08797.1| TPA: Pol31p [Saccharomyces cerevisiae S288c]
gi|392298434|gb|EIW09531.1| Pol31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 487
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE +L ++W + VLK L
Sbjct: 35 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERVLKECDKRWDAGFTLNGQLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|396458314|ref|XP_003833770.1| similar to DNA polymerase subunit delta-2 [Leptosphaeria maculans
JN3]
gi|312210318|emb|CBX90405.1| similar to DNA polymerase subunit delta-2 [Leptosphaeria maculans
JN3]
Length = 522
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKWG-------KSVSVLKLSDLNETDTEECVII 80
K Y +QFA +Y +RL ++++C++ + + W K+ + ++ D+ + E C I+
Sbjct: 67 KHYGQQFADMYFLRLAQLKKCVMQKAEEAWSDFELGGEKATFIERVLDVRQG--ELCWIV 124
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS--DSDELILEDELQRIPLHGNIDIHN 138
GT++ LKPN+L +IS+E + P +VS DE++LEDE R+ + G +
Sbjct: 125 GTVYMEMALKPNVLDDISKEHWIAAPPPRETYVSPNGQDEMMLEDESGRLRVTGESLNSH 184
Query: 139 QVTGVVVAIKGTPVGNGKFKVSDVCYA 165
VTG ++A GT +G F+V YA
Sbjct: 185 YVTGCILAALGTEQADGTFQVIATQYA 211
>gi|323354326|gb|EGA86166.1| Pol31p [Saccharomyces cerevisiae VL3]
Length = 472
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ HIY RL RE L ++W + VLK L
Sbjct: 20 NKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERXLKECBKRWDAGFTLNGQLVLKKDKVL 79
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 80 DIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 139
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 140 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 181
>gi|66359782|ref|XP_627069.1| DNA polymerase delta2, inactive calcineurin like phosphatase
subunit [Cryptosporidium parvum Iowa II]
gi|46228503|gb|EAK89373.1| DNA polymerase delta2, inactive calcineurin like phosphatase
subunit [Cryptosporidium parvum Iowa II]
Length = 475
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 28/189 (14%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYS--KQFAHIYAVRLNKMRECLLARVSQKWGKSVS 62
+ KS RP D KN +C R KDYS Q+ H+ R +R LL V +KW +S
Sbjct: 6 DVKSLKRPEVDIKN--ECERFRVKDYSFPHQYCHLCFSRFMSLRPFLLKAVQRKWKCHLS 63
Query: 63 VLK-------------------LSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL- 101
V + L++L + E EC+I+G + K + +P IL E +++
Sbjct: 64 VEQEKVEKIASQGNPEDRSIPILNELKDMKIESECIIMGFVTKEMKNRPTILDEYLQDIE 123
Query: 102 KLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI---HNQVTGVVVAIKGTPVGNGKFK 158
+ Q +++ S+ D++ +ED RIPL D+ +N ++G ++A++G G F
Sbjct: 124 EATKNSQLSNYTSNDDKVYIEDSSSRIPLTLKEDVFSMNNLISGTILAVRGVQNSGGNFL 183
Query: 159 VSDVCYATP 167
VSD+ +A+P
Sbjct: 184 VSDLTFASP 192
>gi|170583253|ref|XP_001896497.1| pold2-prov protein [Brugia malayi]
gi|158596279|gb|EDP34654.1| pold2-prov protein, putative [Brugia malayi]
Length = 449
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 9/186 (4%)
Query: 11 RPTADYKNLSQCFRLASKD-----YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
R A Y+NLS + + KD + +Q+ H+Y R+ +R ++ G + +
Sbjct: 6 RRPAQYQNLSIKYIIGKKDLEAECFHRQYYHVYRARIKLLRNRIIDNAKLLLGDDIEPCR 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDE 124
L+ + D E ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+
Sbjct: 66 LTKAKKGD--EVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDD 123
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
Q + L G+ + TG VV I G + N F+V + + + +P T N+++Y+
Sbjct: 124 DQIVRLSGDFVMDEVATGCVVGIYGRQLDNDIFQVIKIIWPSKAPQP-TYPVLNDDRYIA 182
Query: 185 HVDAFT 190
V F+
Sbjct: 183 FVSGFS 188
>gi|323304341|gb|EGA58114.1| Pol31p [Saccharomyces cerevisiae FostersB]
Length = 487
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSV---LKLSD---L 69
N S F+L K DY Q+ HIY RL RE +L ++W ++ L L L
Sbjct: 35 NKSNPFQLCYKKRDYDSQYYHIYQYRLKTFRERILKECDKRWDAGFTLNGQLXLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G ++ + KPN+L E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGXIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
+ L G+ I +TGVVV I G G F+V D+CY TP+
Sbjct: 155 VLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPL 196
>gi|242209589|ref|XP_002470641.1| predicted protein [Postia placenta Mad-698-R]
gi|220730320|gb|EED84179.1| predicted protein [Postia placenta Mad-698-R]
Length = 523
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFK 85
A++ Y Q++ IY VRL +R+ ++AR ++W ++ + +IGT++
Sbjct: 36 ANRSYKHQYSSIYYVRLQVLRKYVMARARRRW------------HDVAGQLSYVIGTVYM 83
Query: 86 HQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHG-NIDIHNQVTGV 143
+KPN+L++++ + L P P+ T + S D+ +LEDE RI L G I VTGV
Sbjct: 84 DMPMKPNVLEDLARDHSLPAPAPRMT-YCSQDDQPMLEDESCRIALVGERIRSARLVTGV 142
Query: 144 VVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
V+ I G G+F+V D+C A +P + L+ E+
Sbjct: 143 VLGILGIETSGGEFEVVDICTAGMAPQPYSDLNWGESS 180
>gi|170094006|ref|XP_001878224.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646678|gb|EDR10923.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 544
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD----------------- 68
A K Y Q+++IY VRL +RE + R + W ++ SD
Sbjct: 34 AKKSYKHQYSNIYFVRLRLLREVVEKRAKKLWEHLNGMVHFSDMLTLANASLSKGNPVLI 93
Query: 69 ---LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
L T + C ++GT++ LKPN++++I+ + + P P F S D ++LEDE
Sbjct: 94 PRVLEVTKSHLCYVVGTVYMDMPLKPNVMEDIARDNSIPPPPPPLTFYSPDDNVMLEDES 153
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
RI L G+ + VTGV++ G NG F+V D+C A PR + S N +
Sbjct: 154 GRIRLVGDRLKDARLVTGVIIGALGMETPNGDFEVVDICCAE--MAPRPSASEGTNSAGD 211
Query: 185 HVD------AFTDDDFIRLWEGL 201
+D + D++I + GL
Sbjct: 212 EMDVDDQTTSPASDEWIGVVSGL 234
>gi|365984701|ref|XP_003669183.1| hypothetical protein NDAI_0C02800 [Naumovozyma dairenensis CBS 421]
gi|343767951|emb|CCD23940.1| hypothetical protein NDAI_0C02800 [Naumovozyma dairenensis CBS 421]
Length = 471
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVI 79
+DY+ QF HIY RL+ +E + ++W G+SV + K L+ E C
Sbjct: 40 GRDYNSQFYHIYKYRLDTFKERVTKECVKRWDNGFKLKGRSV-IKKEKVLDIQGNEPCWC 98
Query: 80 IGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELILEDELQRIPLHGN-IDIH 137
IGT++ + KPNIL+E++ + P ++ + SDE++LEDE R+ L G+ I
Sbjct: 99 IGTIYCEMKYKPNILEEVTNDTYGAPDIVKSYTDLEGSDEIMLEDESGRVLLVGDYIRST 158
Query: 138 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
+TG V+ I G G F+V D+CY P P+ L ++N+
Sbjct: 159 PFITGTVIGILGMEADAGTFQVLDICY--PAALPQKPLLLDKNR 200
>gi|401842457|gb|EJT44667.1| POL31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 514
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ H+Y RL R+ +L +W + VLK L
Sbjct: 60 NESNPFQLCHKERDYGSQYYHMYQYRLKTFRDRVLKECDNRWDAGFTLNGKLVLKKDKVL 119
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L+E+ + P +T SDE++LEDE R
Sbjct: 120 DIQGNQPCWCVGSIYCEMKYKPNVLEEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 179
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
+ L G+ I +TGVVV I G G F+V D+CY TP+ +
Sbjct: 180 VLLVGDFIRSAPFITGVVVGILGMEAEAGTFQVLDICYPTPLVQ 223
>gi|281210659|gb|EFA84825.1| DNA polymerase delta subunit 2 [Polysphondylium pallidum PN500]
Length = 535
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 26/173 (15%)
Query: 32 KQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKP 91
+QF IY RL K R L + K+ VS+ K+ L+ EEC++IGTL+K LKP
Sbjct: 135 RQFNKIYYDRLEKFRPILFSLAETKY-PGVSINKI--LHLKPGEECILIGTLYKEMPLKP 191
Query: 92 NILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN---IDIHNQVTGVVVAIK 148
NILK+ +++ + + D LILEDE R+ L G+ +D H +TG+ VAI+
Sbjct: 192 NILKQYAQD--------KSSLIDVGDLLILEDETGRVKLVGDKSLVDSH--LTGLGVAIR 241
Query: 149 GTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
G + + +F++ ++ TP P+ Y+ + + DD ++ + GL
Sbjct: 242 GVGLASAEFEIKEIF--TPGLPPQ--------PYLRNFEKLEDDTYVCIVSGL 284
>gi|298711679|emb|CBJ32730.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 508
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 13/160 (8%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS------VLKLSDL 69
Y+ Q F + K +++QF+H+Y RL ++ + ++WGK V +L ++
Sbjct: 43 YEPRYQRFIVKKKSFTQQFSHVYNKRLLALKGAVRQAAEKRWGKEGEGGGVKFVDRLVNM 102
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKL---VPQPQHTHFVSDSDELILEDELQ 126
E D E V+IGT +K +L+P+IL E E+ + V P + F S+ D L+LEDE
Sbjct: 103 REGD--EWVVIGTTYKAMKLRPSILNEFREDRGISMAVVAPVGS-FTSEDDSLVLEDESG 159
Query: 127 RIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
R+ + G I + V+G+V+A+KGT +G+ V D C A
Sbjct: 160 RVSISGPGIQSSSLVSGLVIAVKGTVTASGEMLVDDWCPA 199
>gi|389749277|gb|EIM90454.1| hypothetical protein STEHIDRAFT_154278 [Stereum hirsutum FP-91666
SS1]
Length = 519
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIG 81
A+K + Q+A+IY +RL +RE + +KW G V V ++ L + C ++G
Sbjct: 36 ANKSFKHQYANIYFIRLKLLREHVEREAERKWREVSGSPVLVPRV--LEVVRGQLCFVVG 93
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQV 140
T++ LK N+L+++ + + P S D + LEDE RI L G I+ V
Sbjct: 94 TVYMEMPLKANVLEDVGRDHSIPAPPPRDKIYSADDHVTLEDESGRIQLVGEKIERERLV 153
Query: 141 TGVVVAIKGTPVGNGKFKVSDVCYA 165
TGV++ G NG F+V DVCYA
Sbjct: 154 TGVILGALGYENANGDFQVVDVCYA 178
>gi|238583563|ref|XP_002390281.1| hypothetical protein MPER_10466 [Moniliophthora perniciosa FA553]
gi|215453515|gb|EEB91211.1| hypothetical protein MPER_10466 [Moniliophthora perniciosa FA553]
Length = 253
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPN 92
+++IY RL +R+ + R ++W VLK ++ C I+GT++ LKPN
Sbjct: 18 HYSNIYFARLRHLRDLVEERARKRWKDLDEVLK--------SQLCYIVGTVYMEMPLKPN 69
Query: 93 ILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTP 151
++++I+ + + P + S D+++LEDE RI L G+ + VTGV++ G
Sbjct: 70 VMEDIARDRSIPSLPPPSKLWSPEDKVMLEDESGRIRLVGDCVKKAKLVTGVILGALGME 129
Query: 152 VGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
NG+F+V D+CY P P T E+ ++D T D++I + GL
Sbjct: 130 TPNGEFEVVDICY--PGMAPNPT---EESGNKMNIDGET-DEWIAVVSGL 173
>gi|401408277|ref|XP_003883587.1| hypothetical protein NCLIV_033420 [Neospora caninum Liverpool]
gi|325118004|emb|CBZ53555.1| hypothetical protein NCLIV_033420 [Neospora caninum Liverpool]
Length = 626
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 36/188 (19%)
Query: 8 SYTRPTADYKNL-SQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKL 66
+ R ADY++ S+ F + + Y +Q++ +Y RL + + L + +W +
Sbjct: 100 GFFRAAADYEDRGSERFVVRPRKYQQQYSAVYYSRLAALSDTLFKQAESRWPGVCIHPCI 159
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQ 126
D+ ++CVI+GTLFK LKP+ LKE +++++ P F+SDSD L LED+
Sbjct: 160 RDVQTG--QQCVIVGTLFKDMVLKPSALKEYLDDIQVQVTP--NSFLSDSDSLFLEDQTA 215
Query: 127 RI--------PLHGNID-----------------------IHNQVTGVVVAIKGTPVGNG 155
R+ P + D ++ VTG++VA++G NG
Sbjct: 216 RVRLVVDAAPPASSDADEETAEETHAEGDAREETEGHQLRVNGVVTGLIVAVRGVATDNG 275
Query: 156 KFKVSDVC 163
+F V D C
Sbjct: 276 RFLVQDFC 283
>gi|378725420|gb|EHY51879.1| DNA polymerase delta subunit 2 [Exophiala dermatitidis NIH/UT8656]
Length = 509
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 96/165 (58%), Gaps = 16/165 (9%)
Query: 11 RPTADYKNLSQCFRLA---SKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-------KS 60
R ++DY L +RL+ SK Y +Q+ +Y +RL K++ + + W K+
Sbjct: 22 RASSDYNPL-YSYRLSRGDSKHYVQQYGDMYFLRLAKLKPVVERIAGEDWEDFEIAGEKA 80
Query: 61 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV-PQPQHTHFVSDSD-E 118
V ++ D+ + C ++GT++ LKPNIL++I++E + P P+H++F +D + +
Sbjct: 81 QRVERVLDVRQGQL--CWVVGTIYMDMPLKPNILEDIAKEHWIAGPPPRHSYFSADIETQ 138
Query: 119 LILEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
++LEDE R+ L G + +N VTGV+VA+ GT NG F+V D+
Sbjct: 139 VMLEDESGRLRLTGPMLENNLLVTGVIVAVLGTENANGDFEVLDL 183
>gi|67608601|ref|XP_666890.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657959|gb|EAL36659.1| hypothetical protein Chro.80190 [Cryptosporidium hominis]
Length = 476
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 25/188 (13%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
+ KS RP D KN + FR+ + Q+ H+ R +R LL V +KW +SV
Sbjct: 6 DVKSLKRPEVDIKNKCERFRVKDYSFPHQYCHLCFSRFMSLRPFLLKAVQRKWKCHLSVE 65
Query: 65 K--------------------LSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL-K 102
+ L++L + E EC+I+G + K + +P IL E +++ +
Sbjct: 66 QEKVEEKIASQGNPEDRLIPILNELKDMKMESECIIMGFVTKEMKNRPTILDEYLQDIEE 125
Query: 103 LVPQPQHTHFVSDSDELILEDELQRIPL---HGNIDIHNQVTGVVVAIKGTPVGNGKFKV 159
Q +++ S+ D++ +ED RIPL ++N ++G ++A++G G F V
Sbjct: 126 TTKNSQLSNYTSNDDKVYIEDSSSRIPLTLKEEVFSVNNLISGTILAVRGVQNSGGNFLV 185
Query: 160 SDVCYATP 167
SD+ +A+P
Sbjct: 186 SDLTFASP 193
>gi|328872180|gb|EGG20547.1| DNA polymerase delta subunit 2 [Dictyostelium fasciculatum]
Length = 495
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKH 86
S + QF IY RL K+R L +V++ W K V K+ + D E +++GTL+K
Sbjct: 64 SMNPDNQFNKIYTDRLEKLRPVLADKVAKIW-KGTPVNKILHVKPGD--EGILVGTLYKE 120
Query: 87 QQLKPNILKEISEELKLVPQP--QHTHFVSDSDELILEDELQRIPLHGNIDIHNQV-TGV 143
LKPNILK+ +E ++P P + + ++SD+D L+ EDE RI L + + + + TG+
Sbjct: 121 MPLKPNILKQYAENRAILPLPVKKVSSYISDADVLLFEDETGRIKLICDKSMVDGLPTGL 180
Query: 144 VVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN----ENKYVNHVDAFTDDDFIRLWE 199
VAI+G + +F+V ++ TP + ++N +NK +N DD ++ L
Sbjct: 181 NVAIRGKGLPGAEFQVYEII--TPGLPSQMFVTNGVHGPDNKDIN------DDVYVCLAS 232
Query: 200 GL 201
GL
Sbjct: 233 GL 234
>gi|388580940|gb|EIM21251.1| hypothetical protein WALSEDRAFT_57598 [Wallemia sebi CBS 633.66]
Length = 508
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 13/184 (7%)
Query: 10 TRPTADYKNL---SQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKS 60
TR ++Y NL S F++ ++ Y QFA +Y +RL K+++ R KW G+S
Sbjct: 17 TRIKSNYDNLDELSSAFKVKHTNQSYQAQFASLYYLRLAKLKKLTQKRSIDKWSEIPGQS 76
Query: 61 VSVLKLSDLNETDTEE-CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-SDSDE 118
S + + D + ++GT++ +LKPN+L +++ V P+ T + S++DE
Sbjct: 77 QKPKFYSRVLDVDQNQLSYVVGTVYMDMKLKPNVLDDLARN-HWVAAPEPTEKIYSNNDE 135
Query: 119 LILEDELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN 177
L LEDE RI L G +++Q VTGV++ + G G+F V D+CY +P S
Sbjct: 136 LCLEDESGRIKLVGETILNSQLVTGVIIGVLGIEKDPGEFTVIDICYPGIPPQPSKVSSM 195
Query: 178 NENK 181
+ +K
Sbjct: 196 DSDK 199
>gi|406606925|emb|CCH41647.1| DNA polymerase delta subunit 2 [Wickerhamomyces ciferrii]
Length = 453
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 14 ADYKNLS-QCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD---- 68
+D+KN + Y KQ+A IYA RL +R +L +KWG+ V K
Sbjct: 23 SDFKNKDLYSLEFNDRPYGKQYASIYATRLAHLRPRVLHNAKKKWGEEVVNGKKVVKKEK 82
Query: 69 -LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQR 127
L+ E ++GT+F + KPNIL E+S ++ T+ D D+++LEDE R
Sbjct: 83 VLDIHSDEPSWVVGTIFCDMKYKPNILDEVSSGIQGADTSIKTYTDPDLDQIMLEDESGR 142
Query: 128 IPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCY 164
+ L G++ + N VTG VV I G G F+V D+ Y
Sbjct: 143 VALEGDL-VKNTILVTGTVVGILGMESRPGVFQVVDIVY 180
>gi|347830780|emb|CCD46477.1| similar to DNA polymerase subunit delta-2 [Botryotinia fuckeliana]
Length = 497
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSV-S 62
TR + YK LS SK Y +Q+ +Y +RL +++ + S W G+ V
Sbjct: 23 TRVPSSYKPLSTFALSKSKQYQQQYGDMYFLRLTSLKKPVEEIASAAWDGFQISGEEVRK 82
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDS-DELI 120
V ++ D+ + C + GT++ + LKPNIL++IS++ + P P+ + D DE++
Sbjct: 83 VERVLDVRQGKL--CWVAGTIYMNMPLKPNILEDISKDHWISAPPPRRKYLSGDGEDEIM 140
Query: 121 LEDELQRIPL-HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNN 178
LEDE R+ L G + VTG +VA+ GT NG F+V D+ P +PR +S
Sbjct: 141 LEDESGRLRLIGGQLSKELLVTGCIVAVMGTENANGDFEVVDIKVPDLPPQEPRWEISGE 200
Query: 179 ENKYVNHVDAF-TDDDFIRLWEGLFFS 204
+ + +D I L GL FS
Sbjct: 201 KEEEDTDMDTGKAGRKKIALVSGLSFS 227
>gi|365759921|gb|EHN01679.1| Pol31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 489
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 18 NLSQCFRLASK--DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-L 69
N S F+L K DY Q+ H+Y RL R+ +L +W + VLK L
Sbjct: 35 NESNPFQLCHKERDYGSQYYHMYQYRLTTFRDRVLKECDNRWDAGFTLNGKLVLKKDKVL 94
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQR 127
+ + C +G+++ + KPN+L+E+ + P +T SDE++LEDE R
Sbjct: 95 DIQGNQPCWCVGSIYCEMKYKPNVLEEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGR 154
Query: 128 IPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
+ L G+ I +TG+VV I G G F+V D+CY TP+ +
Sbjct: 155 VLLVGDFIRSAPFITGLVVGILGMEAEAGTFQVLDICYPTPLVQ 198
>gi|336274849|ref|XP_003352178.1| hypothetical protein SMAC_02613 [Sordaria macrospora k-hell]
gi|380092257|emb|CCC10033.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 492
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Query: 11 RPTADYKNLSQCFRLA-SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------S 62
R +YK L Q F+L ++ Y +Q+A IY +RL K+R + A W +V
Sbjct: 27 RQITNYKPL-QTFKLEKTRPYQQQYADIYFLRLTKIRPAVEAAARAAWEGTVLGGEKVKR 85
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELI 120
V ++ D+ + E C + GT++ LKP+IL+++S++ + H+ S + D ++
Sbjct: 86 VERVLDVRQG--ELCWVAGTVYMDMPLKPSILEDVSKDRWISAPTSIGHYYSGNGDDSIM 143
Query: 121 LEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSNN 178
LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +A +P R +LS
Sbjct: 144 LEDDSGRIRLVGNALQDHFMVTGCIVAVMGTENTNGEFEVIDLLFAELPPQPERWSLSKG 203
Query: 179 ---ENKYVNHVDA 188
E++ V +DA
Sbjct: 204 KKEESEDVEMMDA 216
>gi|256085258|ref|XP_002578839.1| DNA polymerase delta small subunit [Schistosoma mansoni]
gi|353228760|emb|CCD74931.1| putative DNA polymerase delta small subunit [Schistosoma mansoni]
Length = 537
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 33/192 (17%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS--------VSVLKLSDLNETDTEECV 78
S +++Q+ IY RL + L Q+W S + V L+DLN E+C+
Sbjct: 23 SFSFNRQYTQIYLARLTAAKPVLKTLAEQRWSTSSTKSEVSYIPVRTLADLN--GDEKCI 80
Query: 79 IIGTLFKHQQLKPNILKEIS--------EELKLVPQPQHT--HFVSDSDELILEDELQRI 128
IIGTLFK +LKP++L +I+ ++++ + H SD D L LEDE+QRI
Sbjct: 81 IIGTLFKEMRLKPSVLHDIAAVEIENIESDIRISSTDTQSLVHLTSDDDVLFLEDEVQRI 140
Query: 129 PLHGNIDIH------NQVTGVVVAIKGTPVGN--GKFKVSDVCYATPVFKPRTTLSNNEN 180
L I N VTGVVVA G + G F V D+ + P +P + E
Sbjct: 141 ALSFCSQISKLWSPANLVTGVVVAALGYEPESQPGSFCVEDMLFLEP--QPEKPIYVQE- 197
Query: 181 KYVNHVDAFTDD 192
++H+D T D
Sbjct: 198 --ISHIDVNTTD 207
>gi|312093875|ref|XP_003147835.1| pold2-prov protein [Loa loa]
Length = 451
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 11 RPTADYKNLSQCFRLASKD-----YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLK 65
R +A Y+NLS + + D + +Q+ H+Y R+ +++ ++ Q G + +
Sbjct: 6 RRSAHYQNLSDKYLIGKTDIEAECFHRQYYHMYRARVKLLQKRIIDNAKQLLGDDIEPCR 65
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDE 124
L+ + + ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+
Sbjct: 66 LTKAGKD--SKVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDD 123
Query: 125 LQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
Q + L G+ + TG VV I G N F+V++V + + +P + N+ ++YV
Sbjct: 124 DQIVRLSGDFVMDEFATGCVVGIYGMQFDNDIFQVNEVIWPSKAPQPTYPILND-DRYVV 182
Query: 185 HVDAFT 190
V F+
Sbjct: 183 FVSGFS 188
>gi|409046235|gb|EKM55715.1| hypothetical protein PHACADRAFT_173871 [Phanerochaete carnosa
HHB-10118-sp]
Length = 508
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 17 KNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNET 72
K S A+K Y Q+A+IY VRL +R + + W G V V ++ L
Sbjct: 26 KTPSFAINSANKSYKHQYANIYFVRLRLLRGFVEENAKRLWKEAAGDPVFVPRV--LEVQ 83
Query: 73 DTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG 132
+ C ++GT++ LKPN+L +++ + + P + S+ D ++LEDE RI L G
Sbjct: 84 TGQLCYVVGTVYMDMPLKPNVLDDVARDHSIPAPPPQQKYCSEKDSVMLEDESGRIRLVG 143
Query: 133 -NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
+ VTGV++ G NG F+V D C+A
Sbjct: 144 ERLKSARVVTGVIMGALGLETANGDFEVVDFCFA 177
>gi|156844124|ref|XP_001645126.1| hypothetical protein Kpol_538p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115783|gb|EDO17268.1| hypothetical protein Kpol_538p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 474
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVII 80
+DYS QF ++Y RL RE L QKW GK+V V K L+ + C +
Sbjct: 42 RDYSSQFFNLYQTRLKATRERLREECFQKWNNGFKLNGKTV-VEKQKVLDIQGNQPCWCV 100
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNIDIHNQ 139
GT++ + KPNIL E+ ++ P ++ S+ SDE++LEDE R+ L G+
Sbjct: 101 GTIYCEMKYKPNILNEVISDVYGAPDLVKSYTDSEGSDEIMLEDESGRVLLVGDFITSTP 160
Query: 140 -VTGVVVAIKGTPVGNGKFKVSDVCY 164
VTG +V + G G F+V D+CY
Sbjct: 161 FVTGAIVGLLGMEAEAGTFQVLDICY 186
>gi|430813520|emb|CCJ29133.1| unnamed protein product [Pneumocystis jirovecii]
Length = 439
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV----SVLKLSDLNE-TDTEECVIIGT 82
+ Y +Q+A++Y +RL +R ++ + Q WG V V + S L + E C I+GT
Sbjct: 10 RTYQQQYANMYFLRLVHIRPKIVHQAQQNWGDMVIKDWKVKRASRLLDIVHGEICWIVGT 69
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHN-QVT 141
++ LKPNIL +I ++ +V + S + +ILEDE RI L G+ + VT
Sbjct: 70 VYVDAPLKPNILDDIKKDYWMVGPKNEKYIDSTNSNVILEDEYGRIRLVGSKILQEFLVT 129
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNEN----KYVNHVDAFTDDD 193
G V+ G + NG F+V D+C+ P + +L N N KYV V D
Sbjct: 130 GCVIGALGFEIQNGNFEVIDLCF--PELPNQISLPNRNNTDTHKYVALVSGLNITD 183
>gi|45184692|ref|NP_982410.1| AAL132Cp [Ashbya gossypii ATCC 10895]
gi|44980038|gb|AAS50234.1| AAL132Cp [Ashbya gossypii ATCC 10895]
Length = 415
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVIIGTLFK 85
QF +YA RLN+ R+ +LA +KW GK V V K L+ E C +GT++
Sbjct: 2 QFYQMYAYRLNESRKRVLANCQRKWDDGFRIQGKPV-VQKAKVLDIQAGEPCWCVGTIYC 60
Query: 86 HQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNIDIHNQ-VTGV 143
+ KPN+L+E+ + P ++ + +DE++LEDE R+ L G+I VTG
Sbjct: 61 EMKYKPNVLEEVVNDTYGTKAPVKSYTDPEGTDEIMLEDESGRVLLVGDIITSTPFVTGT 120
Query: 144 VVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
VV + G G F+V D+CY P P+ L K V +
Sbjct: 121 VVGVLGMEAEAGTFQVVDICY--PQAIPQAPLVRAPGKSVALISGI 164
>gi|374105608|gb|AEY94519.1| FAAL132Cp [Ashbya gossypii FDAG1]
Length = 415
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVIIGTLFK 85
QF +YA RLN+ R+ +LA +KW GK V V K L+ E C +GT++
Sbjct: 2 QFYQMYAYRLNESRKRVLANCQRKWDDGFRIQGKPV-VQKAKVLDIQAGEPCWCVGTIYC 60
Query: 86 HQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNIDIHNQ-VTGV 143
+ KPN+L+E+ + P ++ + +DE++LEDE R+ L G+I VTG
Sbjct: 61 EMKYKPNVLEEVVNDTYGTKAPVKSYTDPEGTDEIMLEDESGRVLLVGDIITSTPFVTGT 120
Query: 144 VVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
VV + G G F+V D+CY P P+ L K V +
Sbjct: 121 VVGVLGMEAEAGTFQVVDICY--PQAIPQAPLVRAPGKSVALISGI 164
>gi|410083373|ref|XP_003959264.1| hypothetical protein KAFR_0J00610 [Kazachstania africana CBS 2517]
gi|372465855|emb|CCF60129.1| hypothetical protein KAFR_0J00610 [Kazachstania africana CBS 2517]
Length = 481
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVII 80
+DYS QF IY RLN ++E + +++W G+ V + K L+ E C I
Sbjct: 41 RDYSNQFYSIYQHRLNVLKERVEKECNKRWDDHFRLNGRPV-MRKNKVLDIEGNEPCWCI 99
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNIDIHNQ 139
GT++ + KPNIL+E+ + P ++ + SDE++LEDE R+ L G+
Sbjct: 100 GTIYCEMKYKPNILEEVINDTYNAPDLAKSYTDPEGSDEIMLEDESGRVLLVGDFIRQTP 159
Query: 140 -VTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
+TG VV + G G F+V D+CY +P+ +
Sbjct: 160 FITGAVVGLLGMEADAGTFQVLDICYPSPLIQ 191
>gi|302814917|ref|XP_002989141.1| hypothetical protein SELMODRAFT_129338 [Selaginella moellendorffii]
gi|300143041|gb|EFJ09735.1| hypothetical protein SELMODRAFT_129338 [Selaginella moellendorffii]
Length = 425
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 31 SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 90
+Q++H+Y RL+K RE +L + Q V V + L D + CV+IGT++K +LK
Sbjct: 13 GQQYSHLYYCRLHKFRE-VLGSIVQSSLPRVPVSPI--LGLKDGKRCVVIGTVYKQMKLK 69
Query: 91 PNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI-HNQVTGVVVAIKG 149
P+IL E ++E + P + F+ D L+LED R+ L G++ + N VTG+V+A G
Sbjct: 70 PSILDEYAKE-RTKPLATASSFMHSEDYLVLEDASGRVKLVGSMIVPSNYVTGIVIAAWG 128
Query: 150 TPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
+G F V + P P++ L + K F D ++ L GL
Sbjct: 129 QGGKDGDFFVRQII--EPGLPPQSPLPSITGKPACPYLKFR-DKYVALVSGL 177
>gi|159472516|ref|XP_001694397.1| DNA polymerase delta small subunit [Chlamydomonas reinhardtii]
gi|158277060|gb|EDP02830.1| DNA polymerase delta small subunit [Chlamydomonas reinhardtii]
Length = 431
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGT 82
FR + + Y +Q+A +Y RL +++ + RV Q W + V V + ++ E +E +IGT
Sbjct: 4 FRASKRTYDRQYAQLYFSRLMLLKDVMHKRVEQLW-RGVPVCSILEVQEG--KEVAVIGT 60
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL---------HGN 133
L+K+ +LKP+IL E +++ L +F +D D +++ED+ R+ L H
Sbjct: 61 LYKNMKLKPSILDEYTKDRGLKAALGAANFCADDDSVVMEDDGARMVLSDWGLFLSRHTL 120
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
TG+V+A++G G F VS V +A
Sbjct: 121 PGTPQPRTGLVMAVRGVHEPGGDFFVSAVAFA 152
>gi|302811339|ref|XP_002987359.1| hypothetical protein SELMODRAFT_125908 [Selaginella moellendorffii]
gi|300144994|gb|EFJ11674.1| hypothetical protein SELMODRAFT_125908 [Selaginella moellendorffii]
Length = 442
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 31 SKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLK 90
+Q++H+Y RL+K RE +L + Q V V + L D + CV+IGT++K +LK
Sbjct: 13 GQQYSHLYYCRLHKFRE-VLGSIVQSSLPRVPVSPI--LGLKDGKRCVVIGTVYKQMKLK 69
Query: 91 PNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI-HNQVTGVVVAIKG 149
P+IL E ++E + P + F+ D L+LED R+ L G++ + N VTG+V+A G
Sbjct: 70 PSILDEYAKE-RTKPLATASSFMHSEDYLVLEDASGRVKLVGSMIVPSNYVTGIVIAAWG 128
Query: 150 TPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
+G F V + P P++ L + K F D ++ L GL
Sbjct: 129 QGGKDGDFFVRQI--IEPGLPPQSPLPSITGKPACPYLKFR-DKYVALVSGL 177
>gi|346976885|gb|EGY20337.1| DNA polymerase subunit delta-2 [Verticillium dahliae VdLs.17]
Length = 503
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV--- 61
E R + YK L+ + Y +QFA +Y +RL +++ + ++ W +V
Sbjct: 18 ETTQLARAPSTYKPLATFLLKKDRSYQQQFADVYFLRLTRIKPAVEKIAAEAWDGTVIGG 77
Query: 62 ----SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT---HFVS 114
V ++ D+ + E C + GT++ +LKPNIL+++S++ + + P T +
Sbjct: 78 EPAKQVNRVLDVRQG--ELCWVAGTIYMEMRLKPNILEDVSKD-RWISAPISTEKYYSDD 134
Query: 115 DSDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
D D++++ED+ RI L G++ N VTG V+A+ G+ NG+ +V D+ +A
Sbjct: 135 DQDQVMIEDDSGRIRLVGDVLKTVNLVTGCVIAVMGSENANGELEVIDIKFA 186
>gi|408397529|gb|EKJ76671.1| hypothetical protein FPSE_03221 [Fusarium pseudograminearum CS3096]
Length = 436
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------ 62
+R ++ Y+ L+ + Y +Q+ +Y +RL K++ + + W G +V
Sbjct: 24 SRSSSAYRPLNSFALDKQRSYKQQYGDMYFLRLTKIKPAVDQVAATAWDGTTVGDEEVQR 83
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 122
V ++ D+ + E C + GT++ LKPNIL+++S++ + + SD D+++LE
Sbjct: 84 VDRVLDVRQG--ELCYVTGTVYMEMPLKPNILEDVSKDRWISAPISTPKYFSDDDQIMLE 141
Query: 123 DELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSN 177
DE RI L G+I Q VTG +V + GT NG+F++ D+ + P R +LSN
Sbjct: 142 DESGRIRLVGDILKTVQLVTGCIVGVMGTENSNGEFEIIDIKFPDLPPQPERWSLSN 198
>gi|451998402|gb|EMD90866.1| hypothetical protein COCHEDRAFT_1194606 [Cochliobolus
heterostrophus C5]
Length = 519
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSVS-VLKLSDLNETDTEECVII 80
+ YS+QFA +Y +RL ++++ + R + W G+ S V ++ D+ + E C ++
Sbjct: 42 RHYSQQFADMYFLRLMQLKKTVKERAEEAWHNFELGGQKASFVDRVLDVRQG--ELCWVV 99
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDELQRI-----PLHGN 133
GT++ KPN+L +I ++ + PQ ++S S DE++LEDE R+ PLHG+
Sbjct: 100 GTVYMEMAQKPNVLDDIGKDHWIADPPQRDTYISPSGGDEMMLEDESGRLRVTGEPLHGH 159
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKV-SDVCYATPVFKPR 172
VTG ++A GT +G FKV + C P PR
Sbjct: 160 F-----VTGCILAALGTEEADGTFKVIATQCADLPRQPPR 194
>gi|156054518|ref|XP_001593185.1| hypothetical protein SS1G_06107 [Sclerotinia sclerotiorum 1980]
gi|154703887|gb|EDO03626.1| hypothetical protein SS1G_06107 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 475
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSV-S 62
TR + YK L K+Y +Q+ +Y +RL +++ + S W G+ V
Sbjct: 23 TRVPSSYKPLPTFALSKVKNYQQQYGDMYFLRLTTLKKPVEEIASAAWDGFQISGEEVRK 82
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELI 120
V ++ D+ + + C + GT++ + LKPNIL++IS++ + P ++S + DE++
Sbjct: 83 VERVLDVRQG--QLCWVAGTIYMNMPLKPNILEDISKDHWISAPPPRGKYLSGNGDDEIM 140
Query: 121 LEDELQRIPL-HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNN 178
LEDE R+ L G + + VTG +VA+ GT NG F+V D+ P +PR +S
Sbjct: 141 LEDESGRLRLIGGQLSMELLVTGCIVAVMGTENANGDFEVVDIKVPDLPPQEPRWEMSGV 200
Query: 179 ENKYVNHVDAFTDDDF---IRLWEGLFFS 204
+ + +D TD I L GL FS
Sbjct: 201 KEE--EDIDMDTDKAGRKKIALISGLSFS 227
>gi|85101224|ref|XP_961110.1| hypothetical protein NCU03763 [Neurospora crassa OR74A]
gi|16944625|emb|CAC28660.2| related to DNA POLYMERASE DELTA SMALL SUBUNIT [Neurospora crassa]
gi|28922649|gb|EAA31874.1| hypothetical protein NCU03763 [Neurospora crassa OR74A]
Length = 525
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 11 RPTADYKNLSQCFRLA-SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------S 62
R +YK L F+L ++ Y +Q+A IY +RL K+R + A S W +V
Sbjct: 26 RQITNYKPL-HTFKLEKTRPYQQQYADIYFLRLTKIRPAVEAAASAAWEGTVLGGEKVKR 84
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELI 120
V ++ D+ + E C + GT++ LKP+IL+++S++ + H+ S + D ++
Sbjct: 85 VERVLDVRQG--ELCWVAGTVYMDMPLKPSILEDVSKDRWISAPTSVGHYYSGNGEDSVM 142
Query: 121 LEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSNN 178
LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +A +P R +LS
Sbjct: 143 LEDDSGRIRLVGNALQNHFMVTGCIVAVMGTENANGEFEVIDLLFAELPPQPERWSLSKG 202
Query: 179 ENKYVNHVDA-FTDDDFIR 196
+ + + D D F R
Sbjct: 203 KKEADSSEDVEMMDASFSR 221
>gi|336473003|gb|EGO61163.1| hypothetical protein NEUTE1DRAFT_76964 [Neurospora tetrasperma FGSC
2508]
gi|350293747|gb|EGZ74832.1| hypothetical protein NEUTE2DRAFT_155420 [Neurospora tetrasperma
FGSC 2509]
Length = 525
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Query: 7 KSYTRPTADYKNLSQCFRLA-SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV---- 61
++ R +YK L F+L ++ Y +Q+A IY +RL K+R + A S W +V
Sbjct: 22 EALQRQITNYKPL-HTFKLEKTRPYQQQYADIYFLRLTKIRPAVEAAASAAWEGTVLGGE 80
Query: 62 ---SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS-- 116
V ++ D+ + E C + GT++ LKP+IL+++S++ + H+ S +
Sbjct: 81 KVKRVERVLDVRQG--ELCWVAGTVYMDMPLKPSILEDVSKDRWISAPTSVGHYYSGNGE 138
Query: 117 DELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
D ++LED+ RI L GN + H VTG +VA+ GT NG+F+V D+ +A
Sbjct: 139 DSVMLEDDSGRIRLVGNALQNHFMVTGCIVAVMGTENANGEFEVIDLLFA 188
>gi|451848592|gb|EMD61897.1| hypothetical protein COCSADRAFT_147056 [Cochliobolus sativus
ND90Pr]
Length = 519
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSVS-VLKLSDLNETDTEECVII 80
+ YS+QFA +Y +RL ++++ + R + W G+ S V ++ D+ + E C ++
Sbjct: 42 RHYSQQFADMYFLRLIQLKKTVKERAEEAWHNFELGGQKASFVDRVLDVRQG--ELCWVV 99
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDELQRI-----PLHGN 133
GT++ KPN+L +I ++ + PQ ++S S DE++LEDE R+ PLHG+
Sbjct: 100 GTVYMEMAQKPNVLDDIGKDHWIADPPQRDTYISPSGGDEMMLEDESGRLRVTGEPLHGH 159
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKV-SDVCYATPVFKPR 172
VTG ++A GT +G FKV + C P PR
Sbjct: 160 F-----VTGCILAALGTEEADGTFKVIATQCADLPRQPPR 194
>gi|121706972|ref|XP_001271691.1| DNA polymerase delta subunit 2, putative [Aspergillus clavatus NRRL
1]
gi|119399839|gb|EAW10265.1| DNA polymerase delta subunit 2, putative [Aspergillus clavatus NRRL
1]
Length = 540
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Query: 11 RPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS---- 62
R T+ Y L FRL S + Y +Q+ +Y +RL K++ + A ++ W G S++
Sbjct: 21 RETSHYNPL-HTFRLPSGSERQYQQQYGDMYFLRLAKLKPVVEAVGTEAWEGFSIAGEHA 79
Query: 63 --VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV-PQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL ++S+E ++ P P+ T+ EL
Sbjct: 80 HRVERVLDVRQG--ELCWVAGTVYMDMPLKPNILDDLSKENHIIAPPPRRTYIDPAHPEL 137
Query: 120 ---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
+LEDE R+ L GN+ Q+ TG ++A+ GT NG F+ D+ +PR
Sbjct: 138 TQIMLEDESGRLRLTGNLLRSTQLATGAIIAVLGTENANGDFETIDIRVPDLAPQPR 194
>gi|302910988|ref|XP_003050394.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731331|gb|EEU44681.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 500
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 10 TRPTADYKNLSQCFRL-ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS----- 62
+R + YK + Q F L K Y +Q+ +Y +RL K++ + W G S+
Sbjct: 24 SRVPSAYKPM-QSFALDKQKSYQQQYGDMYFLRLTKIKPAVDQVAEAAWSGTSIGGETAQ 82
Query: 63 -VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELIL 121
V ++ D+ + E C + GT++ LKPNIL+++S++ + + SD D+++L
Sbjct: 83 RVERVLDVRQG--ELCWVTGTVYMEMPLKPNILEDVSKDRWISAPISTPKYFSDDDQVML 140
Query: 122 EDELQRIPLHGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSNN 178
EDE RI L G++ +H VTG ++ + GT NG+ +V DV + +P R +L+N
Sbjct: 141 EDESGRIRLVGDLLKSLH-LVTGCIIGVMGTENSNGELEVIDVKFPDLAPQPERWSLTNG 199
Query: 179 ENKYVNHVD 187
K D
Sbjct: 200 TGKKAKGED 208
>gi|46125573|ref|XP_387340.1| hypothetical protein FG07164.1 [Gibberella zeae PH-1]
Length = 502
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------ 62
+R + YK L+ + Y +Q+ +Y +RL K++ + + W G +V
Sbjct: 24 SRSASAYKPLNSFALDKQRSYKQQYGDMYFLRLTKIKPAVDQVAATAWDGTTVGDEEAQR 83
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 122
V ++ D+ + E C + GT++ LKPNIL+++S++ + + SD D+++LE
Sbjct: 84 VDRVLDVRQG--ELCYVTGTVYMEMPLKPNILEDVSKDRWISAPILTPKYFSDDDQIMLE 141
Query: 123 DELQRIPLHGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 164
DE RI L G+I Q VTG +V + GT NG+F++ D+ +
Sbjct: 142 DESGRIRLVGDILKTVQLVTGCIVGVMGTENSNGEFEIIDIKF 184
>gi|254583408|ref|XP_002497272.1| ZYRO0F01738p [Zygosaccharomyces rouxii]
gi|238940165|emb|CAR28339.1| ZYRO0F01738p [Zygosaccharomyces rouxii]
Length = 470
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECV 78
S++Y+ Q+ H+Y RL M+ + ++W G+ V V+K L+ + C
Sbjct: 39 GSRNYNAQYYHMYEHRLRTMKNRVRKECIERWNDDFKLNGEPV-VMKQKVLDIQAGQPCW 97
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELILEDELQRIPLHGN-IDI 136
IG+++ + KPNIL+E+ + P ++ V +DE++LEDE R+ L G+ I
Sbjct: 98 AIGSIYCEMKYKPNILEEVINDTYGAPDLTKSYTDVEGTDEVMLEDESGRVLLVGDYISK 157
Query: 137 HNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNE 179
VTG V+ + G G F+V D+CY TP+ P++ L ++
Sbjct: 158 TPFVTGTVIGVLGMEAEAGTFQVLDICYPTPL--PQSPLPKHD 198
>gi|50549919|ref|XP_502431.1| YALI0D05093p [Yarrowia lipolytica]
gi|49648299|emb|CAG80619.1| YALI0D05093p [Yarrowia lipolytica CLIB122]
Length = 469
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 5 ECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-KSVSV 63
E +S TA N + ++Y++Q+A IY +RL+++ +L + KW K+V
Sbjct: 3 EIRSNLPTTATSLNDGFTLPITKRNYNRQYAPIYYMRLHQLMSQVLDAATSKWADKNVKY 62
Query: 64 L-KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-------- 114
L K D+ DT ++GTLFK + KP++L+E++ P + +V
Sbjct: 63 LNKCLDVLVGDT--VFVVGTLFKDMKYKPSMLEEVTRSHWGAPPGKKPKYVDPQGDCEDG 120
Query: 115 ---DSDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT---P 167
D + LED RI L G + +TGVV + GT NG+F V DV +
Sbjct: 121 GHKDDSSIQLEDSSGRITLVGPKVQEFMLITGVVCGVLGTAGENGRFTVVDVVWGGFPEQ 180
Query: 168 VFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSD 209
+++P + +++ E+ + D +D +I L GL+ +D
Sbjct: 181 IYRPLSGVNDGEDVEMADNDT-PEDTYICLASGLYIGQKKTD 221
>gi|367014817|ref|XP_003681908.1| hypothetical protein TDEL_0E04540 [Torulaspora delbrueckii]
gi|359749569|emb|CCE92697.1| hypothetical protein TDEL_0E04540 [Torulaspora delbrueckii]
Length = 461
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 17 KNLSQ--CFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLK 65
+NL Q F L +KD Y KQ+ +Y RL ++E L ++W GK V + K
Sbjct: 20 ENLDQDNAFELTAKDRSYDKQYFLMYKRRLEILKERTLKECQRRWDDHFTLNGKHVEMRK 79
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDE 124
L+ E +IG+++ + KPNIL+E+ ++ P ++ + SDE++LEDE
Sbjct: 80 -KVLDIQGNEPVWVIGSVYCEMKYKPNILEEVINDVYGAPDLTKSYTDPEGSDEIMLEDE 138
Query: 125 LQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY--ATPVFKPRTTLSNNENK 181
R+ L G NI VTG V+ + G G F+V D+CY A P R ++ N K
Sbjct: 139 SGRVLLVGENIRATPFVTGAVIGVLGMEADAGTFQVLDICYPAALPQKSLRLSVPNGSKK 198
>gi|221055653|ref|XP_002258965.1| DNA polymerase delta small subunit [Plasmodium knowlesi strain H]
gi|193809035|emb|CAQ39738.1| DNA polymerase delta small subunit, putative [Plasmodium knowlesi
strain H]
Length = 477
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 47/217 (21%)
Query: 15 DYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLL---ARVSQKWGKSVSVLKLSDLN- 70
+Y+N S+ F ++ Y++Q+ IY+ R M+ L+ R++Q G + +K S +N
Sbjct: 31 NYENHSKGFVISKATYTQQYCEIYSARTKAMKGLLVKTVERLAQGSGWASHQIK-SQVNG 89
Query: 71 ----ETDT---------------------------------EECVIIGTLFKHQQLKPNI 93
E D+ E C IGTLFK +L+P+I
Sbjct: 90 KVEVELDSKVKREGGEIVKGFAGGGGKEYSLLHYLKEIKANENCYCIGTLFKKMELRPSI 149
Query: 94 LKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVG 153
L E E+ + ++ D D L LEDE R+ L GNI+ + VTG+ V IKG+ +
Sbjct: 150 LNEYISEINET-EDIVVNYSHDEDVLFLEDETARLKLEGNINSDHYVTGLTVIIKGSGMS 208
Query: 154 NGKFKVSDVCYA-TPVFK-PRTTLSNNENKYVNHVDA 188
NG V ++ YA P + PR ++++KY+ V
Sbjct: 209 NGSLYVDELIYAYVPKLEVPRCI--SDDDKYIMFVSG 243
>gi|393216600|gb|EJD02090.1| hypothetical protein FOMMEDRAFT_109238 [Fomitiporia mediterranea
MF3/22]
Length = 519
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW----GKSVSVLKLSDLNETDTEECVIIGTL 83
K Y QF++IY RL ++ + + ++W G V ++ D+ ++ C IIGT+
Sbjct: 35 KSYRHQFSNIYFARLTLLKNIVEKKAKERWKGLSGSPPLVPRVLDVAKSQV--CFIIGTV 92
Query: 84 FKHQQLKPNILKEISEELKLVPQPQ-HTHFVSDSDELILEDELQRIPLHG---------- 132
+ + KPN+L+++ + + +P+P ++S DE++LED+ R+ L G
Sbjct: 93 YLNMPQKPNVLEDVGRD-RYLPEPAPREKYLSPEDEIVLEDDSGRVQLVGEALQRVIDYS 151
Query: 133 -----NIDIHNQ-----VTGVVVAIKGTPVGNGKFKVSDVCYA--TP-VFKPRTTLSNNE 179
N D N V+GV++A G +G F+V DVC+A P +FK T N E
Sbjct: 152 SSEEANGDKPNGWGNVLVSGVIMAALGRETSSGAFEVKDVCFAGMAPMLFKSPKTGDNME 211
Query: 180 NKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
VD D +I GL S P +Q
Sbjct: 212 ------VDTEFPDSWIAFVSGLDMGESSSMDPRMQ 240
>gi|322789096|gb|EFZ14530.1| hypothetical protein SINV_13987 [Solenopsis invicta]
Length = 174
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPL 130
E+ + ++IG L+K Q+LK ++L+++S+EL+L QP ++ S D+L LEDE R+ L
Sbjct: 13 ESSEKSYILIGVLYKDQKLKSSLLRDLSKELQLEAQPS-SNCASVDDKLFLEDETLRVRL 71
Query: 131 HGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
GN ID+ VTG+V A+ G + NG F V D C+ P + P+ +
Sbjct: 72 VGNHIDVQEIVTGLVCAVLGHELENGNFWVEDWCF--PGYYPKPS 114
>gi|19115318|ref|NP_594406.1| DNA polymerase delta small subunit Cdc1 [Schizosaccharomyces pombe
972h-]
gi|13431469|sp|P87324.1|DPOD2_SCHPO RecName: Full=DNA polymerase subunit delta-2
gi|2052244|emb|CAA73148.1| Cdc1 protein [Schizosaccharomyces pombe]
gi|2052246|emb|CAA73149.1| Cdc1 protein [Schizosaccharomyces pombe]
gi|2388945|emb|CAB11679.1| DNA polymerase delta small subunit Cdc1 [Schizosaccharomyces pombe]
Length = 462
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGT 82
L+ + YS+Q+A IY RL +R + S+KW + ++ D+ E+C ++ T
Sbjct: 18 LSLSQQTYSQQYASIYFARLTALRPRITEAASKKWPDKQRLERVLDVKSD--EDCWVVAT 75
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD------ELILEDELQRIPLHGN-ID 135
+ LKPN++ ++++ +V + + +VS D E LED+ RI G+ +
Sbjct: 76 AYMTTALKPNVMNDVTQLHTIVTTTEESPYVSPEDAASGDIEYALEDDYGRIDCSGSFLY 135
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
VTGVV+A+ G G+F V DVC+ +F ++ +E++
Sbjct: 136 DAGVVTGVVLAVLGHEDEQGRFVVVDVCFPG-IFSHSIPMTTDESQ 180
>gi|302418784|ref|XP_003007223.1| DNA polymerase subunit delta-2 [Verticillium albo-atrum VaMs.102]
gi|261354825|gb|EEY17253.1| DNA polymerase subunit delta-2 [Verticillium albo-atrum VaMs.102]
Length = 497
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV- 61
+ E R + YK L + Y +QFA +Y +RL ++ + ++ W +V
Sbjct: 16 DAETTQLARAPSIYKPLPTFVLKKDRSYQQQFADVYFLRLTHIKPAVEKIAAEAWDGTVI 75
Query: 62 ------SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT---HF 112
V ++ D+ + E C + GT++ +LKPNIL+++S++ + + P T +
Sbjct: 76 GGEPAKQVNRVLDVRQG--ELCWVAGTIYMEMRLKPNILEDVSKD-RWISAPVSTEKYYS 132
Query: 113 VSDSDELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
D D++++ED+ RI L G++ N VTG V+A+ G+ NG+ +V D+ +A
Sbjct: 133 EDDQDQVMIEDDSGRIRLVGDVLKTVNLVTGCVIAVMGSENANGELEVIDIKFA 186
>gi|358336103|dbj|GAA54662.1| DNA polymerase delta subunit 2 [Clonorchis sinensis]
Length = 341
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS----VSVLKLSDLNETDTEE-CVIIG 81
S + +Q++ IY R + L A +++W S L + LN T+E CVI+G
Sbjct: 27 SLSFHRQYSKIYTARFTAAQPVLSAAATRQWAASEHPSRDQLPIRSLNSLVTDEKCVILG 86
Query: 82 TLFKHQQLKPNILKEISEE------LKLVPQPQHTHFVSDSDELILEDELQRI-----PL 130
TL+K +LKP+IL++++ ++L +T SD D + LED +QRI L
Sbjct: 87 TLYKEMKLKPSILRDLANSEFGQGGVQLQGDTLNTLMSSD-DSIFLEDNVQRIRVVMDGL 145
Query: 131 HGNIDIHNQVTGVVVAIKGTPV--GNGKFKVSDVCYATP-VFKPRTTLSNNENKYVNHVD 187
HG + + N TGVVVA+ G G F V D+ + P KP +L N K +
Sbjct: 146 HG-VSVTNLATGVVVALLGVEPEHAQGSFHVEDILFLEPQPEKPICSLPAN-TKRADWTQ 203
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKP 211
++ L GL F+ +P
Sbjct: 204 FRISGPWLALVSGLDFNGAGQTRP 227
>gi|320583347|gb|EFW97562.1| DNA polymerase III (delta) subunit [Ogataea parapolymorpha DL-1]
Length = 488
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 20 SQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS-------VSVLKLSDLN 70
S +RL ++ Y+ QF IY+ R+ K++ L R + KW + V V K+ D+
Sbjct: 20 SDAYRLPPGTRTYANQFNKIYSQRVKKLKSRCLKRANAKWKQETINNTNVVYVNKILDVK 79
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISE------------ELKLVPQPQHTHFVSD--S 116
+ C IGT+F + KPNIL+E+S EL + Q + T + SD +
Sbjct: 80 --NMTPCYTIGTVFMDMKYKPNILEEVSNNVYGANDVQESAELSKLDQLRATAY-SDPQN 136
Query: 117 DELILEDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 167
D+++LEDE R+ L G I D VTG VV + G V G F V DV Y P
Sbjct: 137 DQVMLEDESGRMILDGEILDKILLVTGAVVGVLGMEVEAGIFTVVDVVYPEP 188
>gi|440635650|gb|ELR05569.1| hypothetical protein GMDG_07489 [Geomyces destructans 20631-21]
Length = 516
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-------K 59
KS R +YK L K Y +Q+ +Y +RL K++ ++ W +
Sbjct: 22 KSIERLPCEYKPLYTFDLEKDKQYKQQYGDMYFLRLAKLKPAAEKVAAEAWAGFGIGGEE 81
Query: 60 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE--LKLVPQPQHTHFVSDSD 117
+ V ++ D+ + E C + GT++ LKPNIL +IS++ VP Q SD
Sbjct: 82 ATKVERVLDVRQG--ELCWVTGTIYMDMALKPNILDDISKDHWTSAVPPRQKYKSSDGSD 139
Query: 118 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
+LEDE R+ L G+ + VTG +V++ GT NG F+V D+ TP P+ T
Sbjct: 140 STMLEDESGRVRLIGSRLADEMMVTGCIVSVMGTENANGDFEVIDI--RTPDLAPQPT 195
>gi|134058506|emb|CAL00715.1| unnamed protein product [Aspergillus niger]
Length = 516
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-G 58
N E + TR + YK L FRL S + Y +Q+ +Y +RL K++ + + W G
Sbjct: 13 NEEFDATTRVPSHYKPL-DTFRLGSGQDRHYQQQYGDMYFLRLAKLKPAVEEIAVEAWEG 71
Query: 59 KSVS------VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTH 111
S++ V ++ D+ + E C + GT++ LKPNIL ++++E L P P+ T+
Sbjct: 72 FSIAGENARRVERVLDVRQG--ELCWVAGTIYMDMPLKPNILDDLTKENYTLAPPPRPTY 129
Query: 112 FVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 130 QDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVIDT 184
>gi|345567478|gb|EGX50410.1| hypothetical protein AOL_s00076g174 [Arthrobotrys oligospora ATCC
24927]
Length = 466
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSV----LKLSD--LNETDTEE 76
F+L + Y Q+ IY +RL K++ + A ++W +V V +K D L+ E
Sbjct: 21 FQLDTLSYQTQYVDIYFLRLAKLKRIVEAHGRERW-DAVEVNGDYVKRVDRVLDVRQGEL 79
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGN-I 134
C I GT++ + LKPN+L +I+++ + P P+ + + D++++EDE R+ L G+ I
Sbjct: 80 CWITGTIYMNMPLKPNVLDDIAKDHFISAPLPRQKYRDFEKDQIMIEDESGRLELVGSKI 139
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
+ VTG VV + GT +G+F+V D+
Sbjct: 140 KTEDLVTGCVVGVMGTETASGEFEVIDI 167
>gi|317038112|ref|XP_001401596.2| DNA polymerase delta subunit 2 [Aspergillus niger CBS 513.88]
Length = 533
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-G 58
N E + TR + YK L FRL S + Y +Q+ +Y +RL K++ + + W G
Sbjct: 13 NEEFDATTRVPSHYKPL-DTFRLGSGQDRHYQQQYGDMYFLRLAKLKPAVEEIAVEAWEG 71
Query: 59 KSVS------VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTH 111
S++ V ++ D+ + E C + GT++ LKPNIL ++++E L P P+ T+
Sbjct: 72 FSIAGENARRVERVLDVRQG--ELCWVAGTIYMDMPLKPNILDDLTKENYTLAPPPRPTY 129
Query: 112 FVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 130 QDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVIDT 184
>gi|403166950|ref|XP_003326790.2| hypothetical protein PGTG_08327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166794|gb|EFP82371.2| hypothetical protein PGTG_08327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 550
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 10 TRPTADYKNLSQ-----CFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
TRP Y LS+ ++ Y++QFA +Y +RL+++RE L + ++W K+ +
Sbjct: 5 TRPPQTYDPLSRLRDEFVVPFKARSYAQQFAKVYFLRLSRLRERLKEKCLERW-KAQTPC 63
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDELILED 123
++ D++ + V+IGTL+ +LKPN+L++++ E L P +VS D D ++LED
Sbjct: 64 RVLDIDPSRI--SVVIGTLYCEMKLKPNVLEDLAREHHLGPALGPRKWVSTDEDSIMLED 121
Query: 124 ELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
E R+ L G + + VTG++V + G G F+V D+ YA +PR
Sbjct: 122 ESGRVRLVGIDREKFTLVTGIIVGVMGRETSKGDFQVHDLIYAGVPDQPR 171
>gi|363752703|ref|XP_003646568.1| hypothetical protein Ecym_4733 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890203|gb|AET39751.1| hypothetical protein Ecym_4733 [Eremothecium cymbalariae
DBVPG#7215]
Length = 462
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 30 YSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSV-SVLKLSDLNETDTEECVIIG 81
Y Q+ +Y RL + R+ + +KW GK+V K+ D+ T+ CV G
Sbjct: 42 YDTQYFPLYQYRLEEFRKRVTLNCQEKWDDGFQIQGKTVVQKKKVLDIQATEPSWCV--G 99
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHF-VSDSDELILEDELQRIPLHGNIDIHNQ- 139
T++ + KPNIL+E+ + V ++ + SDE++LEDE RI L G++ I N
Sbjct: 100 TIYCEMKYKPNILEEVINDTYGVTGVVKSYTDIQGSDEVMLEDESGRILLIGDL-IKNTI 158
Query: 140 -VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
VTG+VV + G G F+V D+CY + P+ LSN K V +
Sbjct: 159 FVTGIVVGVLGMEAEAGTFQVLDICYPKSI--PQAPLSNVNGKKVAFISGL 207
>gi|219564285|dbj|BAH03711.1| DNA polymerase III (delta) subunit [Saccharomyces pastorianus]
Length = 195
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 34 FAHIYAVRLNKMRECLLARVSQKWGKSVS-----VLKLSD-LNETDTEECVIIGTLFKHQ 87
+ HIY RL RE +L ++W + VLK L+ + C +G+++
Sbjct: 1 YYHIYQYRLKTFRERVLKECDKRWDAGFTLNGQLVLKKDKVLDIQGNQPCWCVGSIYCEM 60
Query: 88 QLKPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVV 144
+ KPN+L E+ + P +T SDE++LEDE R+ L G+ I +TGVV
Sbjct: 61 KYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDFIRSTPFITGVV 120
Query: 145 VAIKGTPVGNGKFKVSDVCYATPV 168
V I G G F+V D+CY TP+
Sbjct: 121 VGILGVEAEAGTFQVLDICYPTPL 144
>gi|444322766|ref|XP_004182024.1| hypothetical protein TBLA_0H02190 [Tetrapisispora blattae CBS 6284]
gi|387515070|emb|CCH62505.1| hypothetical protein TBLA_0H02190 [Tetrapisispora blattae CBS 6284]
Length = 480
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 23 FRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKW---GKSVSVLKLSD----LNETD 73
F L KD Y Q+ +Y RL+K+RE + KW G ++S K+ + L+
Sbjct: 34 FYLGYKDRNYKSQYYEMYKFRLSKLRERVRKECLSKWNSNGFTLSNKKVVEKKRVLDVQG 93
Query: 74 TEECVIIGTLFKHQQLKPNILKEI-SEELKLVPQPQHTHFVSD---SDELILEDELQRIP 129
E C IGT++ + KPN+ +EI S++ ++ +D SDE++LEDE RI
Sbjct: 94 NEPCWCIGTIYCEMKFKPNVFEEIVSDQYSNTNNIKNIKNYTDPDGSDEIMLEDESGRII 153
Query: 130 LHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN 178
L G + I N +TG VV + G G F+V D+CY + + SNN
Sbjct: 154 LCGEL-IKNTPFITGTVVGLLGMEAEAGSFQVLDICYPQAIPQLPVPTSNN 203
>gi|388856329|emb|CCF50138.1| related to HYS2-DNA-directed DNA polymerase delta, 55 KD subunit
[Ustilago hordei]
Length = 514
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 42/217 (19%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKW--------------GKSVSV------- 63
L S+ YSKQFA +Y RL +++ +L R +W G +
Sbjct: 29 LGSRSYSKQFAQLYDYRLAYLKKRILPRAHSRWITNLDSFFQSQSQPGSELDPSPSSSSS 88
Query: 64 ----LKLSD--------LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH 111
+++ D L+ E C ++G ++ LKP++L++++ E L PQP
Sbjct: 89 ARGRMRMEDPPKLVDRILDIRQGEICYVVGNIYCAMPLKPDVLEDLTREQWLAPQPVRAK 148
Query: 112 FVSDS-DELILEDELQRIPL-----HGNIDIHNQ-VTGVVVAIKGTPVGNGKFKVSDVCY 164
FV + DEL +ED+ R+ L G + +TGVV A+ GT G F V D +
Sbjct: 149 FVDYAKDELFIEDQSGRVKLVGEAIRGGTALREMLITGVVAAVLGTETRAGDFDVVDAVF 208
Query: 165 ATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGL 201
A+ + P S+ + T D ++ L GL
Sbjct: 209 AS-LPSPAKAASSGRDGKAKGESGGT-DQWVVLISGL 243
>gi|401882114|gb|EJT46387.1| DNA polymerase delta, small subunit [Trichosporon asahii var.
asahii CBS 2479]
Length = 490
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 11 RPTADYKNLSQCFRLASKDYSK-----QFAHIYAVRLNKMRECLLARVSQKWG------- 58
RP+ Y +L + + D SK Q+A++Y VRL ++R + + W
Sbjct: 15 RPSVPYSSLPELSKPFLIDPSKRSFKHQYANVYFVRLVELRPIVEEHAKRLWAERHCGYI 74
Query: 59 --------KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 110
K + ++ DLN + C I+GT++ LKPN+L++++ + P
Sbjct: 75 FRNYLTLVKPRLLPRILDLNRG--QPCYIVGTVYMDMPLKPNVLEDMARSNWIAPPAPRP 132
Query: 111 HFVSDSDELILEDELQRIPLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVC 163
F S D + LEDE R+ L G++ + VTGV++ + G +G F+V ++C
Sbjct: 133 KFYSSQDAVHLEDESGRVRLVGDVIRKERDREGGGFVTGVIMGVLGFENSSGDFEVMELC 192
Query: 164 YA--TPVFKPRTT-LSNNENKYVNHVDAFTDDDFIRLWEGL 201
+A V+ P ++ +N + K +D DD + W L
Sbjct: 193 FAGMPDVYHPSSSGTANGKGKARESMDV---DDESKTWVAL 230
>gi|366992752|ref|XP_003676141.1| hypothetical protein NCAS_0D01980 [Naumovozyma castellii CBS 4309]
gi|342302007|emb|CCC69779.1| hypothetical protein NCAS_0D01980 [Naumovozyma castellii CBS 4309]
Length = 473
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS------VLKLSDLNETDTEECVIIG 81
+DYS QF H+Y RL +E + ++W V K L+ + C IG
Sbjct: 41 RDYSSQFYHMYKYRLVTFKERVNRECLKRWDNGFELKGNPVVKKEKVLDIQGNQPCWCIG 100
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGN-IDIHNQ 139
T++ + KPNIL+E+ + P ++ + +DE++LEDE R+ L G+ I
Sbjct: 101 TIYCEMKYKPNILEEVVNDTYGAPDLVKSYMDPEGADEIMLEDESGRVLLVGDFIKSTPF 160
Query: 140 VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLS 176
+TG VV + G G F+V D+CY P P+ LS
Sbjct: 161 ITGTVVGVLGMEADAGTFQVLDICY--PAAIPQKPLS 195
>gi|432118135|gb|ELK38020.1| DNA polymerase delta subunit 2 [Myotis davidii]
Length = 163
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
E C + GTL K +L P+ L+E+S+E L+P P + ++ DEL+LE+ELQ I L I
Sbjct: 40 ERCCVEGTLLKAMELWPSNLQEVSKEHSLLPTPPWSKYIHADDELVLEEELQCIKLEVTI 99
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
D+ + TG+++ + G+ +GKF V + C+
Sbjct: 100 DMFSLATGMLLTVLGSMRDDGKFLVEEHCF 129
>gi|322694605|gb|EFY86430.1| DNA polymerase delta subunit 2, putative [Metarhizium acridum CQMa
102]
Length = 485
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 14 ADYKNLSQCFRL-ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSVS-VLK 65
AD N F L + Y +Q+ +Y +RL K++ + S W G+ V V +
Sbjct: 74 ADSYNPLHAFDLDKQRSYKQQYGDMYFLRLTKIKPAVEEVASAAWEGTMIGGEEVKRVER 133
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQP-QHTHFVSD-SDELILE 122
+ D+ + E C + GT++ LKPNIL+++S++ + P P Q T+F D SD+++LE
Sbjct: 134 VLDVRQG--ELCWVAGTVYMEMPLKPNILEDVSKDRWISAPIPTQQTYFSHDGSDQIMLE 191
Query: 123 DELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
D+ RI L G+ + VTG ++A+ GT +G+F+V D Y
Sbjct: 192 DDSGRIRLVGDLVQSVPLVTGCIIAVMGTENSSGEFEVIDTKY 234
>gi|358366085|dbj|GAA82706.1| DNA polymerase delta subunit 2 [Aspergillus kawachii IFO 4308]
Length = 532
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-G 58
N E + TR + Y +L FRL S + Y +Q+ +Y +RL K++ + + W G
Sbjct: 12 NEEFDAITRVPSHYHSL-DTFRLGSGQDRHYQQQYGDMYFLRLAKLKPAVEEIAVEAWEG 70
Query: 59 KSVS------VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTH 111
S++ V ++ D+ + E C + GT++ LKPNIL ++++E L P P+ T+
Sbjct: 71 FSIAGENARRVERVLDVRQG--ELCWVAGTIYMDMPLKPNILDDLTKENYTLAPPPRPTY 128
Query: 112 FVSDSDEL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
EL +LEDE R+ L G++ + Q+ TG ++A+ GT NG F+V D
Sbjct: 129 QDPAHPELTQIMLEDESGRLRLTGSMLRNTQLCTGAIIAVLGTENANGDFEVIDT 183
>gi|169602154|ref|XP_001794499.1| hypothetical protein SNOG_03956 [Phaeosphaeria nodorum SN15]
gi|111068041|gb|EAT89161.1| hypothetical protein SNOG_03956 [Phaeosphaeria nodorum SN15]
Length = 499
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 1 MKNIECKSYTRPTADYKNLSQCFRL---ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW 57
+ +++ + R +DY L F L A + Y++QFA +Y +RL ++ + AR W
Sbjct: 15 LPDLQHYAPLRGASDYHPL-HTFDLPKGADRHYAQQFADMYFLRLAHLKAQVKARAQDAW 73
Query: 58 -------GKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 110
K+ V ++ D+ ++ E C ++GT+F +KPN+L +I++E + P+ T
Sbjct: 74 HDFELGGAKAQFVERVLDVRQS--ELCWVVGTVFMDLAMKPNVLDDITKEHWIAAPPKRT 131
Query: 111 HFVSDSD--ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKV 159
++ + +++LEDE R+ + G+ + VTG V+A GT +G F+V
Sbjct: 132 TYLEPAKPADMMLEDESGRLRVTGDPLRAHFVTGCVLAALGTEQADGTFQV 182
>gi|310794252|gb|EFQ29713.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 500
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SV 63
R + YK L+ + Y +Q+A +Y +RL ++ + A ++ W +V V
Sbjct: 26 RAPSHYKPLNTFALPKERSYQQQYADVYFLRLTSIQPAVNAVAAEAWDGTVIGGEEAKHV 85
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDE--LI 120
++ D+ + E C + GT++ LKPNIL++++++ + + P T + SD D+ ++
Sbjct: 86 NRVLDVRQG--ELCWVTGTVYMDMALKPNILEDVTKD-RWISAPVSTDRYYSDDDKDTIM 142
Query: 121 LEDELQRIPLHGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSN 177
LED+ RI L G++ IH VTG ++ + GT NG+ +V DV + +P R TL++
Sbjct: 143 LEDDSGRIRLVGDVLKSIH-LVTGTIIGVMGTENANGELEVIDVKFPDLAPQPSRWTLTD 201
Query: 178 NENK 181
+ ++
Sbjct: 202 SPSQ 205
>gi|406700838|gb|EKD04000.1| DNA polymerase delta, small subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 617
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 11 RPTADYKNL---SQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG------- 58
RP+ Y +L S+ F + + + + Q+A++Y VRL ++R + + W
Sbjct: 142 RPSVPYSSLPELSKPFLIDPSKRSFKHQYANVYFVRLVELRPIVEEHAKRLWAERHCGYI 201
Query: 59 --------KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT 110
K + ++ DLN + C I+GT++ LKPN+L++++ + P
Sbjct: 202 FRNYLTLVKPRLLPRILDLNRG--QPCYIVGTVYMDMPLKPNVLEDMARSNWIAPPAPRP 259
Query: 111 HFVSDSDELILEDELQRIPLHGNI-------DIHNQVTGVVVAIKGTPVGNGKFKVSDVC 163
F S D + LEDE R+ L G++ + VTGV++ + G +G F+V ++C
Sbjct: 260 KFYSSQDAVHLEDESGRVRLVGDVIRKERDREGGGFVTGVIMGVLGFENSSGDFEVMELC 319
Query: 164 YA--TPVFKPRT-TLSNNENKYVNHVDAFTDDDFIRLWEGL 201
+A V+ P + +N + K +D DD + W L
Sbjct: 320 FAGMPDVYHPSSLGTANGKGKARESMDV---DDESKTWVAL 357
>gi|156094127|ref|XP_001613101.1| DNA polymerase delta small subunit [Plasmodium vivax Sal-1]
gi|148801975|gb|EDL43374.1| DNA polymerase delta small subunit, putative [Plasmodium vivax]
Length = 514
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
E C IGTLFK +L+P+IL E E+ + ++ D D L LEDE R+ L GNI
Sbjct: 162 ENCYCIGTLFKKMELRPSILNEYISEINEA-EDVVVNYSHDEDVLFLEDETARLKLEGNI 220
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKYVNHVDAFTDDD 193
+ + VTG+ V IKGT + NG V ++ YA P + +S+ DD
Sbjct: 221 NSDHYVTGLTVIIKGTGMSNGSLYVEELIYAYVPKLEVPRCISD-------------DDK 267
Query: 194 FIRLWEGLFFS 204
+I GL+ S
Sbjct: 268 YILFVSGLYIS 278
>gi|406861039|gb|EKD14095.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 507
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 8 SYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSV 61
S TR + YK L K Y +Q+A +Y +RL K++ + A ++ W G+ V
Sbjct: 22 SLTRRPSAYKPLLTYALEKEKHYQQQYADMYFLRLAKLKPAVEAIAAEAWDGFCIGGEEV 81
Query: 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--L 119
+ L+ + C + GT++ LKPNIL +IS++ + P ++S + E +
Sbjct: 82 ERTERV-LDVRQGKLCWVAGTIYMEMPLKPNILDDISKDHWISALPPRQKYLSPTGEDLV 140
Query: 120 ILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
+LEDE R+ L G + VTG +VA+ GT NG F+V D+
Sbjct: 141 MLEDESGRLRLVGAPLASEMLVTGCIVAVMGTENANGDFEVVDI 184
>gi|389583517|dbj|GAB66252.1| DNA polymerase delta small subunit [Plasmodium cynomolgi strain B]
Length = 461
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
E C IGTLFK +L+P+IL E E+ + ++ D D L LEDE R+ L GN
Sbjct: 122 NENCYCIGTLFKKMELRPSILNEYISEINEA-EDVVVNYSHDEDVLFLEDETARLKLEGN 180
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDD 193
I+ + VTG+ V +KGT + NG V ++ YA + P+ + TDDD
Sbjct: 181 INSDHYVTGLTVIVKGTGMSNGSLYVDELIYA---YVPKLEVPR----------CITDDD 227
Query: 194 -FIRLWEGLFFS 204
++ GL+ S
Sbjct: 228 KYVMFVSGLYIS 239
>gi|358389752|gb|EHK27344.1| hypothetical protein TRIVIDRAFT_73251 [Trichoderma virens Gv29-8]
Length = 503
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 12/162 (7%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--VLKLS 67
R + YK L + Y +Q+ +Y +RL K++ + S+ W G + + K
Sbjct: 23 RADSAYKPLHSFALDKQRSYKQQYGDMYFLRLAKIKPAVEEVASKAWEGTEIGGELAKRV 82
Query: 68 D--LNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSD-SDELILED 123
D L+ E C + GT++ +LKPNIL+++S++ L P ++ D SD+++LED
Sbjct: 83 DRVLDVRQGELCWVAGTVYMDMKLKPNILEDVSKDQWLSAPMSSQKYYSDDGSDQIMLED 142
Query: 124 ELQRIPLHGNIDIHNQ---VTGVVVAIKGTPVGNGKFKVSDV 162
+ R+ L G D+ N VTG +VA+ GT NG+F+V D+
Sbjct: 143 DSGRVRLVG--DLLNSIPLVTGCIVAVMGTENTNGEFEVIDL 182
>gi|317146095|ref|XP_003189770.1| DNA polymerase delta subunit 2 [Aspergillus oryzae RIB40]
Length = 540
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 18/167 (10%)
Query: 11 RPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS---- 62
R ++ Y L F+L S + Y +Q+ +Y +RL K++ + + W G S++
Sbjct: 24 RSSSSYNPL-HTFQLPSGQERHYQQQYGDMYFLRLAKLKPAVEEIAVETWEGFSIAGEHA 82
Query: 63 --VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL ++++E L P P+ T+ EL
Sbjct: 83 RRVERVLDVRQG--ELCWVAGTIYMDLPLKPNILDDLTKENFTLAPPPRPTYLDPAHPEL 140
Query: 120 ---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
+LEDE R+ L GN+ Q+ TG +VA+ GT NG F+V DV
Sbjct: 141 TQIMLEDESGRLRLTGNMLRSIQLATGAIVAVLGTENSNGDFEVIDV 187
>gi|322711483|gb|EFZ03056.1| DNA polymerase delta small subunit [Metarhizium anisopliae ARSEF
23]
Length = 438
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 14 ADYKNLSQCFRL-ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW------GKSVS-VLK 65
AD N F L + Y +Q+ +Y +RL K++ + S W G+ V V +
Sbjct: 27 ADSYNPLHAFDLDKQRSYKQQYGDMYFLRLTKIKPAVEEVASAAWEGTMIGGEEVKRVER 86
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQP-QHTHFVSD-SDELILE 122
+ D+ + E C + GT++ LKPNIL+++S++ + P P Q T+F D SD+++LE
Sbjct: 87 VLDVRQG--ELCWVAGTVYMEMSLKPNILEDVSKDRWISAPIPTQQTYFSPDGSDQIMLE 144
Query: 123 DELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
D+ RI L G+ + VTG ++A+ GT +G+F+V D +
Sbjct: 145 DDSGRIRLVGDLLQSVPLVTGCIIAVMGTENSSGEFEVIDTKF 187
>gi|124504825|ref|XP_001351155.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
gi|3649756|emb|CAB11105.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
Length = 498
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
E+C IGT+FK +L+P+IL E E+ ++ ++ D D L LEDE R+ L GNI
Sbjct: 150 EKCYCIGTIFKKMELRPSILNEYLSEISILNNT--INYTHDEDILFLEDETARLKLEGNI 207
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVFKPRTTLSNNENKYVNHVDAFTDDD 193
+ +TG+ V +KG + NG V ++ Y+ P +SN DD
Sbjct: 208 NSDFYITGLTVIVKGIGMSNGSLYVEEIIYSYIPKLDIPNCISN-------------DDK 254
Query: 194 FIRLWEGLFFS 204
FI GL+ +
Sbjct: 255 FILFVSGLYIN 265
>gi|342866430|gb|EGU72091.1| hypothetical protein FOXB_17335 [Fusarium oxysporum Fo5176]
Length = 481
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------ 62
+R + YK L + Y +Q+ +Y +RL K++ + ++ W G +
Sbjct: 24 SRSASVYKPLQSFVLDKQRSYQQQYGDMYFLRLTKIKPAVDKVAAEAWTGTKIGEEEAQR 83
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILE 122
V ++ D+ + E C + GT++ LKPNIL+++S++ + + S D+++LE
Sbjct: 84 VERVLDVRQG--ELCWVTGTVYMEMPLKPNILEDVSKDRWISAPILTPKYFSKDDQVMLE 141
Query: 123 DELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
DE RI L G++ N VTG ++ + GT NG+ +V D+ +
Sbjct: 142 DESGRIRLVGDVLKTVNLVTGCIIGVMGTENANGELEVIDIKF 184
>gi|402081179|gb|EJT76324.1| DNA polymerase delta small subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 510
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 14 ADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SVLKL 66
+ YK L ++ Y +Q+ +Y +RL +R + S +G + V ++
Sbjct: 30 SSYKPLDSFVLPKNRQYKQQYGDMYFLRLTMVRPAVEQVASAAFGDVIIGGEPAQKVERV 89
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDE 124
D+ + E C + GT++ LKPNIL++++++ + P ++S+ D ++LED+
Sbjct: 90 LDVRQG--ELCWVTGTVYMDMPLKPNILEDVAKDRWISAPPTAQKYISEDGQDSIMLEDD 147
Query: 125 LQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTLSN 177
R+ L G++ + VTG ++A+ GT +G F+V DV Y +P R LSN
Sbjct: 148 SGRVRLVGDVLEGAILVTGCIIAVMGTENADGDFEVIDVRYPDLAPQPDRWALSN 202
>gi|354543385|emb|CCE40104.1| hypothetical protein CPAR2_101420 [Candida parapsilosis]
Length = 477
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 2 KNIECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV 61
KN+ K P+ K S+ Y +Q+ +Y R NK+++ +KWG
Sbjct: 14 KNVHRKEVRIPSEFAKRNEFFIDPKSRKYDQQYFSMYQYRYNKLQKRAWTNAMKKWGNGT 73
Query: 62 SVLKLSDLNETD-------TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS 114
+ + + D + C +IGT+F + K NIL ++ + V + ++S
Sbjct: 74 KKVDGQTITKQDKILDIVGGKLCWVIGTVFVDAKYKLNILNDVEKGTDDVLPLEPVSYLS 133
Query: 115 DSDE--LILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
DS++ ++LEDE R LH + + + VTG +VA+ G + G F++ DV Y P
Sbjct: 134 DSEQPVVMLEDESGRAILHNDEFLQHNLLVTGCIVAVLGIEIQAGIFEIMDVAY--PECA 191
Query: 171 PRTTLSNNENK 181
P+ LSN E +
Sbjct: 192 PQKPLSNGETR 202
>gi|260948094|ref|XP_002618344.1| hypothetical protein CLUG_01803 [Clavispora lusitaniae ATCC 42720]
gi|238848216|gb|EEQ37680.1| hypothetical protein CLUG_01803 [Clavispora lusitaniae ATCC 42720]
Length = 540
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS---- 62
KS T P D NL FRL ++ YS+QF +Y RL +++ A+ +KWG
Sbjct: 97 KSPTVP-GDKDNL---FRLNTRSYSRQFFALYQQRLQQLKPRTDAQALEKWGDGTRRVDG 152
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDE 118
V K L+ E C + GT+F + K NIL ++ + + ++P T+ D
Sbjct: 153 QTIVRKEKILDIASGELCWVSGTVFADSRKKLNILNDVEKGIDDVMPASPPTYVDPDDGL 212
Query: 119 LILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
L+LED+ R LH + + N VTG VA+ G + G F+ ++ TP
Sbjct: 213 LMLEDDSGRAVLHNDELLQNSGLVTGCFVAVLGIEIQAGIFEAMEIICPTPA 264
>gi|367025627|ref|XP_003662098.1| hypothetical protein MYCTH_2302249 [Myceliophthora thermophila ATCC
42464]
gi|347009366|gb|AEO56853.1| hypothetical protein MYCTH_2302249 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-----GKSVSVLK 65
R ++YK+L + Y +QFA IY +RL K++ + S W G +
Sbjct: 26 RSESNYKSLDNFALPKDRQYQQQFADIYFLRLAKIKPAVEEVASAAWEGTELGGETATKV 85
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILED 123
L+ + C + GT++ LKP++L++++++ + H+ S++ + ++LED
Sbjct: 86 DRVLDVRQGQLCWVAGTIYMDMPLKPSVLEDVAKDRWISAPTTADHYYSEAGGESIMLED 145
Query: 124 ELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
+ RI L G++ + VTG ++A+ GT NG+F+V D+ +A
Sbjct: 146 DSGRIRLVGDVLKSYFLVTGCIIAVMGTENVNGEFEVIDLKFA 188
>gi|307212533|gb|EFN88256.1| DNA polymerase delta subunit 2 [Harpegnathos saltator]
Length = 446
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 4 IECKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSV 63
+EC Y R + + + F+L + Y +IY RLN +RE L + KW S
Sbjct: 2 MECDEYKRKVVSFNDFGR-FKLLDRRYDNNSLNIYTARLNDLREDTLRKAKLKW-VGYSH 59
Query: 64 LKLSDLNETDTEEC-VIIGTLFKHQ---QLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
+++S L D E+ ++IG L K +LK ++L++I+ E + Q ++ S+ ++
Sbjct: 60 VEISHLVVEDKEKSYILIGVLCKDDLKEKLKLSLLRDINNEPQQGMQTSQ-NYTSNYIKI 118
Query: 120 ILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
LEDE R+ L GN +D+ +TGVV A+ G G F V D C+ KP T+
Sbjct: 119 FLEDETSRVRLMGNHMDMQEIITGVVCAVFGHETETGAFWVEDWCFPGYCSKPCTS 174
>gi|367038615|ref|XP_003649688.1| hypothetical protein THITE_2108468 [Thielavia terrestris NRRL 8126]
gi|346996949|gb|AEO63352.1| hypothetical protein THITE_2108468 [Thielavia terrestris NRRL 8126]
Length = 518
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SV 63
R ++YK+L + Y +QFA IY +RL K++ + S W ++ V
Sbjct: 26 RTASNYKSLDTFSLPKDRQYQQQFADIYFLRLTKIKPAVEEVASAAWEGTILGGETATKV 85
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELIL 121
++ D+ + + C + GT++ LKP++L+++S++ + H+ S+ + ++L
Sbjct: 86 DRVLDVRQ--GQLCWVAGTVYMDMPLKPSVLEDVSKDRWISAPTTVGHYYSENGGESIML 143
Query: 122 EDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
ED+ RI L G I + VTG ++A+ GT NG+F+V D+ +A
Sbjct: 144 EDDSGRIRLVGAILKDYFLVTGCIIAVMGTENVNGEFEVIDLKFA 188
>gi|71030786|ref|XP_765035.1| DNA polymerase delta small subunit [Theileria parva strain Muguga]
gi|68351991|gb|EAN32752.1| DNA polymerase delta small subunit, putative [Theileria parva]
Length = 419
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 31/197 (15%)
Query: 17 KNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE- 75
++ S+ F A + Y Q+ +L M++ LL + KW S LK+S E+D E
Sbjct: 12 ESYSERFVTAGEGYKSQYYLRSMSKLQSMKKLLLETIKTKW----SNLKIS---ESDPEA 64
Query: 76 ----------ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDEL 125
+CV+IGT+FK + P L E ++ + + + + + D D L LED
Sbjct: 65 YKLVESINYVKCVVIGTVFKQMKYHPTPLDEYIQKFDIKVE-EKSEYTDDEDYLFLEDHT 123
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
QR+ L GN I+ H V+G+V+A++G KF D Y P TL N + +
Sbjct: 124 QRLILVGNCINPHKFVSGLVIAVRGYMNDENKFVTED--YTLPEIPDSLTLYNIKQE--- 178
Query: 185 HVDAFTDDDFIRLWEGL 201
++ FI L GL
Sbjct: 179 ------EEKFIALISGL 189
>gi|50285409|ref|XP_445133.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524436|emb|CAG58033.1| unnamed protein product [Candida glabrata]
Length = 479
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECVII 80
+DYS Q+ +Y RL ++ + + +KW GK V V K + L+ E C I
Sbjct: 42 RDYSPQYHFLYQYRLTVLKNRIREQCYKKWDAGFQLNGKEV-VEKKNVLDIQGKEPCWCI 100
Query: 81 GTLFKHQQLKPNILKEISEEL--KLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHN 138
GT+++ + KPN+L+E+ + + P+ +DE++LEDE R+ L G++
Sbjct: 101 GTIYREMKYKPNVLEEVMNDTYGTVDINPESYTDPDGTDEIMLEDESGRLILVGDMIAET 160
Query: 139 Q-VTGVVVAIKGTPVGNGKFKVSDVCY 164
+TG V+ + G G F+V D+CY
Sbjct: 161 PFITGTVIGVLGMEADAGTFQVLDLCY 187
>gi|70994498|ref|XP_752028.1| DNA polymerase delta subunit 2 [Aspergillus fumigatus Af293]
gi|66849662|gb|EAL89990.1| DNA polymerase delta subunit 2, putative [Aspergillus fumigatus
Af293]
Length = 554
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 18 NLSQCFRLASKD---YSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N F+L D Y +Q+ +Y +RL +++ + + W G S++ V ++
Sbjct: 52 NPLHTFKLPPGDARHYQQQYGDMYFLRLARLKPVVEEVGTDAWEGFSIAGERARRVERVL 111
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDEL---ILED 123
D+ + E C + GT++ LKPNIL ++S E L P P+ T+ EL +LED
Sbjct: 112 DVRQG--ELCWVAGTVYMDMPLKPNILDDLSRESHTLAPPPRRTYQDPAHPELTQIMLED 169
Query: 124 ELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
E R+ L G++ Q+ TGV++A+ GT NG F+ D+ +PR NEN+
Sbjct: 170 ESGRLRLTGSLLTSTQLATGVIIAVLGTENANGDFETIDIRVPDLPPQPR-RWERNENR 227
>gi|159125059|gb|EDP50176.1| DNA polymerase delta subunit 2, putative [Aspergillus fumigatus
A1163]
Length = 554
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 18 NLSQCFRLASKD---YSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N F+L D Y +Q+ +Y +RL +++ + + W G S++ V ++
Sbjct: 52 NPLHTFKLPPGDARHYQQQYGDMYFLRLARLKPVVEEVGTDAWEGFSIAGERARRVERVL 111
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDEL---ILED 123
D+ + E C + GT++ LKPNIL ++S E L P P+ T+ EL +LED
Sbjct: 112 DVRQG--ELCWVAGTVYMDMPLKPNILDDLSRESHTLAPPPRRTYQDPAHPELTQIMLED 169
Query: 124 ELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
E R+ L G++ Q+ TGV++A+ GT NG F+ D+ +PR NEN+
Sbjct: 170 ESGRLRLTGSLLTSTQLATGVIIAVLGTENANGDFETIDIRVPDLPPQPR-RWERNENR 227
>gi|255936291|ref|XP_002559172.1| Pc13g07420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583792|emb|CAP91811.1| Pc13g07420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 541
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSDLNET----DTEECVII 80
A + Y +Q+ +Y +RL K++ + + W G +++ K+ ++ E C +
Sbjct: 43 AGRHYQQQYDDMYFLRLAKLKPTVEQVATDAWDGLTIAGEKVRRVDRVLDVRQGELCWVA 102
Query: 81 GTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD----ELILEDELQRIPLHGNID 135
GT++ H +KPNIL+++S+E P P T + SD +++LEDE R+ L GN
Sbjct: 103 GTVYMHLPMKPNILEDLSKENFTSAPPPLRT-YTDPSDPSLTQIMLEDESGRLRLTGNFL 161
Query: 136 IHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
Q+ TG ++A GT NG F+V D+
Sbjct: 162 QSTQLATGAIIAALGTENANGDFEVIDI 189
>gi|302310769|ref|XP_455752.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425089|emb|CAG98460.2| KLLA0F14949p [Kluyveromyces lactis]
Length = 462
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEEC 77
+ +++Y QF +Y RLN +R + + KW G+ V V K L+ E C
Sbjct: 38 MKNRNYDMQFYKMYQYRLNVLRNRVESCCQSKWNSEFRLQGRKV-VKKSKVLDIQAGEPC 96
Query: 78 VIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNIDI 136
IGT++ Q KPNIL+EI ++ P ++ + +DE++L+DE R+ L G +
Sbjct: 97 WCIGTVYCEMQYKPNILQEIVDDTYGAPDLIKSYTDPEGTDEIMLDDESGRVILVGELVR 156
Query: 137 HNQ-VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
V+G VV I G G F+V D+CY P P+ +L
Sbjct: 157 KTPFVSGTVVGILGMEADAGTFQVLDICY--PQALPQKSL 194
>gi|402224606|gb|EJU04668.1| hypothetical protein DACRYDRAFT_93140 [Dacryopinax sp. DJM-731 SS1]
Length = 418
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 45 MRECLLARVSQKWGKSVSVLKLSD--LNETDTEECVIIGTLFKHQQLKPNILKEISEELK 102
+R + R +KW K L+ E C IIGT++ LKPN+L++IS++
Sbjct: 2 LRRAVEQRAREKWSSMEGEPKYCKRVLDVQKGELCFIIGTIYMDMPLKPNVLEDISKDHW 61
Query: 103 LVPQPQHTHFVSDSDELILEDELQRIPLHG-NIDIHNQVTGVVVAIKGTPVGNGKFKVSD 161
+ P S D ++LEDE R+ L G + + VTGV++ G G F+V D
Sbjct: 62 IAAPPPRPKIFSPDDSVMLEDESGRVRLVGERVSKAHLVTGVIMGALGAETAKGDFEVVD 121
Query: 162 VCYA 165
VC+A
Sbjct: 122 VCFA 125
>gi|115397999|ref|XP_001214591.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192782|gb|EAU34482.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 541
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 9 YTRPTADYKNLSQCFRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS-- 62
Y +P+ + N F+L S + Y +Q+ +Y +RL K++ + W G S++
Sbjct: 23 YRQPS--HYNPLDTFKLPSGQERHYQQQYGDMYFLRLAKLKPAVEKVAVDAWEGFSIAGE 80
Query: 63 ----VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD 117
V ++ D+ + E C + GT++ LKPNIL ++++E L P P+ T+
Sbjct: 81 RARRVDRVLDVRQG--ELCWVAGTIYMDMPLKPNILDDLTKENFTLAPPPRRTYLDPAHP 138
Query: 118 EL---ILEDELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
EL +LEDE R+ L G++ Q+ TG ++A+ GT NG F+ D+
Sbjct: 139 ELTQIMLEDESGRLRLTGSMLQSTQLATGAIIAVLGTENANGDFEAIDI 187
>gi|367005664|ref|XP_003687564.1| hypothetical protein TPHA_0J03100 [Tetrapisispora phaffii CBS 4417]
gi|357525868|emb|CCE65130.1| hypothetical protein TPHA_0J03100 [Tetrapisispora phaffii CBS 4417]
Length = 468
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 15 DYKNLSQCFRLASKDYSK--QFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLK 65
DYK + F + KDY Q+ Y RL ++E + +KW GK+V V K
Sbjct: 28 DYK-FDEHFSVDLKDYDSCGQYYKFYQTRLRVLKERTRNQCLKKWDAGFKLNGKTV-VEK 85
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDE 124
L+ + C IGT++ + KPN+L+E+ + P ++ D +DE++LEDE
Sbjct: 86 KKVLDIQANQPCWCIGTIYCEMKYKPNVLEEVVNDTYGAPDLLKSYTDPDGTDEIMLEDE 145
Query: 125 LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL-SNNENKY 182
R+ L G+ + VTG VV + G G F++ D+CY + V + + +++E KY
Sbjct: 146 SGRVLLVGDFLQSTPFVTGTVVGLLGMEAEAGTFQILDICYPSEVPQKEYQVPTSDEEKY 205
Query: 183 VNHVDAF 189
+ V
Sbjct: 206 IALVSGL 212
>gi|425765731|gb|EKV04389.1| DNA polymerase delta subunit 2, putative [Penicillium digitatum
Pd1]
gi|425777618|gb|EKV15778.1| DNA polymerase delta subunit 2, putative [Penicillium digitatum
PHI26]
Length = 544
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSDLNET----DTEECVII 80
A + Y +Q+ +Y +RL K++ + W G ++ K+ ++ E C +
Sbjct: 43 AGRHYQQQYDDMYFLRLAKLKPTVEQVAMDAWDGLVIAGEKVRRVDRVLDVRQGELCWVA 102
Query: 81 GTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD----ELILEDELQRIPLHGNID 135
GT++ H LKPNIL+++S+E P P+ T + SD ++++EDE R+ L GN
Sbjct: 103 GTVYMHLPLKPNILEDLSKENFTSAPPPRRT-YTDPSDPSLTQIMMEDESGRLRLTGNFL 161
Query: 136 IHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
Q+ TG ++A GT NG F+V D+
Sbjct: 162 QSTQLATGAIIAALGTENANGDFEVIDI 189
>gi|242808477|ref|XP_002485172.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715797|gb|EED15219.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 545
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 21 QCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSDLNET-DTEE-- 76
Q + S+ Y +Q+ +Y +RL K++ + W G +++ K ++ D +
Sbjct: 36 QLPKADSRKYQQQYGDLYFLRLAKLKPAAEKVGREAWDGFTIAGEKARKVDRVLDVRQGA 95
Query: 77 -CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS----DSDELILEDELQRIPLH 131
C + GT++ LKPNIL +++++ P T ++ D +++LEDE R+ +
Sbjct: 96 LCWVTGTVYMDLPLKPNILDDVAKDNYAAAPPPRTTYIDPLNPDKTQVMLEDESGRLRMT 155
Query: 132 GN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNE 179
G + + VTGV++A+ GT NG F+V D+ PV PR L++ +
Sbjct: 156 GTMLRTTHLVTGVIIAVLGTENSNGDFEVIDIKVPDFPVQPPRWELASTD 205
>gi|308809712|ref|XP_003082165.1| DPOD2_ORYSA DNA polymerase delta small subunit (ISS) [Ostreococcus
tauri]
gi|116060633|emb|CAL57111.1| DPOD2_ORYSA DNA polymerase delta small subunit (ISS) [Ostreococcus
tauri]
Length = 453
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL 69
R T D ++ + L + Q+ +Y RL ++ +A +W + V + +L
Sbjct: 8 ARGTRDGSTTNEKYALTGRVDHGQYYQLYYNRLMALKPRAVASARARW-PNAPVRGVLEL 66
Query: 70 NETDTEECVIIGTLFKHQQLKPNIL----KEISEELKLVPQPQHTHFVSDSDELILEDEL 125
E E CV++GT++K + KP IL K+ E+ + + ++ + D L EDE
Sbjct: 67 KEH--EPCVVVGTVYKEMKDKPIILDEYVKDFEREVYEAKRIERGNYCREDDRLEFEDEG 124
Query: 126 QRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV--FKPRTTLSNNENKYV 183
R+ + G +D VTGVV A KG G+F+V D P + T ++ + KYV
Sbjct: 125 ARVRVLG-VDAGRFVTGVVCAFKGRATSKGEFEVEDAAVFAPARGGEDAVTTADGDAKYV 183
>gi|325092264|gb|EGC45574.1| DNA polymerase delta small subunit [Ajellomyces capsulatus H88]
Length = 565
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y +P+A Y LS R + Y +Q+A IY +RL +++ + W G S++
Sbjct: 24 YRQPSA-YSPLSTFVLPRGEMRHYQQQYADIYFLRLARLKPTVAEIAVAAWEGFSIAGEY 82
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL +IS+E P +V S++
Sbjct: 83 AKRVDRVLDVRQG--ELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPVRRTYVDPSNQA 140
Query: 120 I----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+ LEDE R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 141 LTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|119500938|ref|XP_001267226.1| DNA polymerase delta subunit 2, putative [Neosartorya fischeri NRRL
181]
gi|119415391|gb|EAW25329.1| DNA polymerase delta subunit 2, putative [Neosartorya fischeri NRRL
181]
Length = 554
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRLASKD---YSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N F+L S D Y +Q+ +Y +RL +++ + W G S++ V ++
Sbjct: 52 NPLHTFKLPSGDARHYQQQYGDMYFLRLARLKPVVEEVGMDAWEGFSIAGERARRVERVL 111
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDEL---ILED 123
D+ + E C + GT++ LKPNIL ++S E L P P+ T+ EL +LED
Sbjct: 112 DVRQG--ELCWVGGTVYMDMPLKPNILDDLSRESHTLAPPPRRTYQDPAHPELTQIMLED 169
Query: 124 ELQRIPLHGNIDIHNQV-TGVVVAIKGTPVGNGKFKVSDV 162
E R+ L GN+ Q+ TG ++A+ GT NG F+ D+
Sbjct: 170 ESGRLRLTGNLLRSTQLATGAIIAVLGTENANGDFETIDI 209
>gi|189193957|ref|XP_001933317.1| DNA polymerase subunit delta-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978881|gb|EDU45507.1| DNA polymerase subunit delta-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 530
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------GKSVSVLKLSDLNETDTEECV 78
A + Y++QFA +Y +RL ++++ + + W K+ V ++ D+ E C
Sbjct: 39 AERQYTQQFADMYFLRLMQLKKTVKQLAEEAWHGFELDDKKASFVERVLDVRRG--ELCW 96
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS--DELILEDELQRIPLHGNIDI 136
++GT++ KPN+L +I ++ + P +VS S DE++LEDE R+ + G
Sbjct: 97 VVGTVYMDMAGKPNVLDDIEKDNWIADPPHRDTYVSPSGGDEMMLEDESGRLRVSGEPLQ 156
Query: 137 HNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPR 172
VTG ++A GT +G F V + YA P PR
Sbjct: 157 GRVVTGCILAALGTEQDDGSFLVIAIQYADLPRQPPR 193
>gi|303390663|ref|XP_003073562.1| DNA polymerase delta regulatory subunit B [Encephalitozoon
intestinalis ATCC 50506]
gi|303302709|gb|ADM12202.1| DNA polymerase delta regulatory subunit B [Encephalitozoon
intestinalis ATCC 50506]
Length = 425
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLF 84
LAS Y QF Y RL +++ ++ V + G + L E DT CVI+GTLF
Sbjct: 4 LASVSYEHQFNRTYDARLAELKPYIIRSVRAQNGVPILDTILGVEEELDTSTCVIVGTLF 63
Query: 85 KHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH----GNIDIHNQV 140
LKP+I +I + K + + + + ++ + +LED RI L G+I + V
Sbjct: 64 VASDLKPSIFDKIDRKSKKLKEVETKTYYTEDIKYLLEDGSGRIELEFLDVGDIYRKHFV 123
Query: 141 --TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRT 173
TG+ V ++G GKF D+ + P PR+
Sbjct: 124 LCTGMCVGVQGRRAKKGKFLAEDIIF--PFSNPRS 156
>gi|212537697|ref|XP_002149004.1| DNA polymerase delta subunit 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210068746|gb|EEA22837.1| DNA polymerase delta subunit 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 544
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 21 QCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSDLNET-DTEE-- 76
Q + S+ Y +Q++ +Y +RL K++ + W G +++ K ++ D +
Sbjct: 36 QLPKADSRQYQQQYSDLYFLRLAKLKPAAEKVGREAWDGFTIAGEKARKVDRVLDVRQGA 95
Query: 77 -CVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHF---VSDSDELILEDELQRIPLH 131
C + GT++ + LKPNIL +++++ P P+ T+ D +++LEDE R+ +
Sbjct: 96 LCWVTGTVYMNLPLKPNILDDVAKDNYAAAPPPRKTYLDPSNPDQTQVMLEDESGRLRMT 155
Query: 132 GN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
G+ + + VTGV++A+ GT NG F+V D+ P F P+ +
Sbjct: 156 GSMLRTTHLVTGVIIAVLGTENSNGDFEVIDI--KVPDFPPQPS 197
>gi|399218766|emb|CCF75653.1| unnamed protein product [Babesia microti strain RI]
Length = 443
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW---GKSVSVLKLSDLNETDT-EECV 78
F + S DY++Q+ + RL ++ L+A Q+W G + L + DT CV
Sbjct: 16 FLMNSHDYTEQYYSLITNRLQSLKPYLVATAKQRWPCIGTVDGPYLANLLKDVDTVNSCV 75
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIH 137
II +FK + P+ L E + ++ + ++S+ D + LED RI L GN I++
Sbjct: 76 IIAAIFKEMKNCPSALDEYTGKMY---KRDLNSYISEDDIVYLEDYTSRIVLGGNKINVQ 132
Query: 138 NQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN 178
+ V+G+++A+ G + +GKF V D+ P L NN
Sbjct: 133 SFVSGLIIAVLGK-LEDGKFIVEDLALPGPPINMYKPLPNN 172
>gi|261204916|ref|XP_002627195.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis SLH14081]
gi|239592254|gb|EEQ74835.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis SLH14081]
gi|327348397|gb|EGE77254.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 566
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y +P+A Y LS R + Y +Q+A IY +RL +++ + W G +++
Sbjct: 24 YRQPSA-YSPLSTFVLPRGEMRHYQQQYADIYFLRLARLKPAVTEIAVASWEGFNIAGEY 82
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE- 118
V ++ D+ + E C + GT++ LKPNIL +IS+E P +V S++
Sbjct: 83 ARRVDRVLDVRQG--ELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPSRKTYVDSSNQS 140
Query: 119 ---LILEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+LEDE R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 141 LTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|380483266|emb|CCF40727.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 504
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------S 62
+R + YK L+ + Y +Q+A IY +RL +R + A ++ W ++
Sbjct: 25 SRDPSRYKPLNSFALPKERSYQQQYADIYFLRLTSIRPAVDAAAAEAWDGTIIGGEEAKH 84
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVS---DSDE 118
V ++ D+ + E C + GT++ LKPNIL+++S++ + + P T + S D D
Sbjct: 85 VNRVLDVRQ--GELCWVTGTVYIDMALKPNILEDVSKD-RWISAPISTDRYYSNEDDKDM 141
Query: 119 LILEDELQRIPLHGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKP-RTTL 175
++LED+ RI L G++ IH VTG ++ + G+ NG+ +V DV + +P R TL
Sbjct: 142 IMLEDDSGRIRLVGDVLKSIH-LVTGTIIGVLGSENANGELEVIDVKFPDLAPQPSRWTL 200
Query: 176 SNNENK 181
+++ ++
Sbjct: 201 TDSPSE 206
>gi|449015469|dbj|BAM78871.1| DNA polymerase delta, subunit B [Cyanidioschyzon merolae strain
10D]
Length = 425
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLF 84
L +Y +Q++ +Y RL +MR ++ + +S LN T+ ++G +F
Sbjct: 38 LEQANYMQQYSQLYFCRLAEMRNFYSTYTD------ITRVAISQLNPVQTQW--VVGIIF 89
Query: 85 KHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIP--LHGNIDIHNQVT 141
K LKP+ILK ++++ L VP+ + ++ S D + +EDE RI H H+ VT
Sbjct: 90 KQMPLKPSILKSYADDIMLTVPELRLLNYTSGDDRVYVEDETGRIECVFHPEDRKHDVVT 149
Query: 142 GVVVAIKGTPVGNGKFKVSDV 162
G+V+A++G +G F+V+++
Sbjct: 150 GMVIALQGLVGADGLFRVNEI 170
>gi|294941698|ref|XP_002783195.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239895610|gb|EER14991.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 498
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 10 TRPTADYKNLSQCFR-----------LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG 58
TR +A Y++L FR L++ ++ Q+A Y RLN ++ ++ KW
Sbjct: 38 TRKSARYQDLCDSFRDDIRGSDDKLRLSACNFELQYASTYFARLNMLKNAIVEAAKAKWV 97
Query: 59 KSVSVLKLSDLNE-----TDTEECV---IIGTLFKHQQLKPNILKEISEELKLVP-QPQH 109
S V+ L E TD E V I G + K +L+P++L EI + + P
Sbjct: 98 AS-RVIPSDHLLEGIGHVTDRERGVTVAIYGCVVKEVKLRPSVLAEIQKTAGISGIHPAM 156
Query: 110 T--------HFVSDSDELILEDELQRIPL----HGNIDIHNQVTGVVVAIKGTPVGNGKF 157
T + SD D++ LED RI L +D++ G+V+A KGT G G F
Sbjct: 157 TSEGYSMTDSYTSDEDKIYLEDSSSRIRLVVREGATVDLNRLCQGLVLAFKGT-RGRGCF 215
Query: 158 KVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
+V ++ Y P+ S+ + +YV V
Sbjct: 216 EVDEMVYPLS-LSPKAIPSSRDAEYVGFVSGL 246
>gi|328859185|gb|EGG08295.1| hypothetical protein MELLADRAFT_35023 [Melampsora larici-populina
98AG31]
Length = 480
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 10 TRPTADYKNLSQ-----CFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL 64
TR T Y L+Q + S+ +S QF+++Y RL K++ L + KW +
Sbjct: 7 TRLTLSYDPLNQLRSEFIIKSNSRQFSSQFSNLYYQRLLKLKSNLQSSSKVKWKDEFKSV 66
Query: 65 KLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE---LIL 121
++ D+ ++ V+IGT++ + KPN+L ++S E+ + +VS D+ ++L
Sbjct: 67 RILDI--LVGQKMVVIGTVYCDLKFKPNVLDDLSREVSTTSSLK--KWVSKDDQQITVML 122
Query: 122 EDELQRIP-LHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
EDE RI L + + N VTG V+A+ G NG FKV ++ A
Sbjct: 123 EDESGRIKLLFDHPEEFNFVTGTVMAVLGEETENGDFKVHEIVNA 167
>gi|330923754|ref|XP_003300360.1| hypothetical protein PTT_11594 [Pyrenophora teres f. teres 0-1]
gi|311325535|gb|EFQ91548.1| hypothetical protein PTT_11594 [Pyrenophora teres f. teres 0-1]
Length = 560
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 8 SYTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------G 58
+ +R + Y L Q + Y++QFA +Y +RL ++++ + + W
Sbjct: 22 AASRDASAYSPLHQFLLPPATERQYTQQFADMYFLRLMQLKKTVKQLAEEAWRGFELDDK 81
Query: 59 KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS-- 116
K+ V ++ D+ E C ++GT++ KPN+L +I ++ + P +VS S
Sbjct: 82 KASFVERVLDVRRG--ELCWVVGTVYMEMAGKPNVLDDIEKDNWIADPPHRDTYVSASGG 139
Query: 117 DELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPR 172
DE++LEDE R+ + G VTG ++A GT +G F V + YA P PR
Sbjct: 140 DEMMLEDESGRLRVSGEPLQGRVVTGCILAALGTEQDDGSFLVIAIQYADLPRQPPR 196
>gi|255711228|ref|XP_002551897.1| KLTH0B02464p [Lachancea thermotolerans]
gi|238933275|emb|CAR21459.1| KLTH0B02464p [Lachancea thermotolerans CBS 6340]
Length = 486
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD------LNETDTEE 76
+ + Y +Q+ +Y RL +RE + KW + L+ E
Sbjct: 59 LKYEDRKYDEQYYSMYQYRLKVLRERVTKNCEVKWDSHFKLKNRKVVKKNKVLDIQANEP 118
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD-SDELILEDELQRIPLHGNI- 134
C +GT++ + KPNIL+E+ ++ P + D +DE++LEDE R+ L G +
Sbjct: 119 CWCVGTIYCEMKYKPNILEEVVNDVYGAPDLVKGYLDEDGTDEVMLEDESGRVLLVGELA 178
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
V+G VV I G G F+V D+C+ P P+T L
Sbjct: 179 KTKPLVSGTVVGILGMEADAGTFQVLDICF--PSALPQTEL 217
>gi|154279190|ref|XP_001540408.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412351|gb|EDN07738.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 565
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y +P+A Y LS R + Y +Q+A IY +RL +++ + W G +++
Sbjct: 24 YRQPSA-YSPLSTFVLPRGEMRHYQQQYADIYFLRLARLKPTVAEIAVAAWEGFNIAGEY 82
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL +IS+E P +V S++
Sbjct: 83 AKRVDRVLDVRQG--ELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPVRRTYVDPSNQA 140
Query: 120 I----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+ LEDE R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 141 LTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|403222064|dbj|BAM40196.1| DNA polymerase delta small subunit [Theileria orientalis strain
Shintoku]
Length = 420
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTE------- 75
F + Y Q+ +L M+ L+ + KW LK+ D + +
Sbjct: 18 FTTHGESYKSQYYVRSMSKLECMKRILMKTIKNKWKN----LKIDDSDPGSYKLVKSINY 73
Query: 76 ---ECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLH 131
+CVIIGT+FKH + +P+ L+E +++ L V + + + D D L LED QR+ L
Sbjct: 74 VKGKCVIIGTVFKHMKYQPSPLEEYTQKFNLMVKKEKRNEYTDDEDFLFLEDHTQRLMLI 133
Query: 132 GN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLS-NNENKYVNHVDAF 189
G+ ++ H V+G+V+A++G KF D Y P +L N+E K++ AF
Sbjct: 134 GDCLNPHEFVSGLVIAVRGYMNEQMKFVTED--YTLPEVPDELSLQVNDEEKFI----AF 187
Query: 190 T 190
T
Sbjct: 188 T 188
>gi|240281243|gb|EER44746.1| DNA polymerase delta small subunit [Ajellomyces capsulatus H143]
Length = 565
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y +P+A Y LS R + Y +Q+A IY +RL +++ + W G +++
Sbjct: 24 YRQPSA-YSPLSTFVLPRGEMRHYQQQYADIYFLRLARLKPTVAEIAVAAWEGFNIAGEY 82
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL +IS+E P +V S++
Sbjct: 83 AKRVDRVLDVRQG--ELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPVRRTYVDPSNQA 140
Query: 120 I----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+ LEDE R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 141 LTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|259481579|tpe|CBF75230.1| TPA: DNA polymerase III (delta) subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 538
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 18 NLSQCFRLA---SKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRL + Y +Q+ +Y +RL K++ + A + W G S++ V ++
Sbjct: 30 NPLNTFRLPPGQERQYQQQYGDMYFLRLAKLKPAVEAVAVEAWEGFSIAGEHARRVERVL 89
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTH---FVSDSDELILED 123
D+ + E C + GT++ LKPNIL +++++ P P+ T+ + E++LED
Sbjct: 90 DVRQG--ELCWVAGTIYMEMPLKPNILDDLAKDNFTSAPPPRRTYQDPAHPELTEIMLED 147
Query: 124 ELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
E R+ L G+ + TGV++A+ GT NG F+ D+ +PR
Sbjct: 148 ESGRLRLTGSKLQSVQLATGVIIAVLGTENANGDFEAIDIKVPDLARQPR 197
>gi|400602313|gb|EJP69915.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 524
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLSD 68
YK LS + Y +Q+ +Y +RL K++ + + W G +V V ++ D
Sbjct: 30 YKPLSTFTLDQQRSYQQQYGDMYFLRLTKIKPAVEEVAAAAWDGTTVGGETAKKVDRVLD 89
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQ 126
+ + E C + GT++ LKPNIL+++S++ L + SD SD++ LED+
Sbjct: 90 VRQG--ELCWVAGTVYMDMALKPNILEDVSKDRWLSAPISTQKYYSDDGSDQVTLEDDSG 147
Query: 127 RIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
R+ L G+I VTG ++A+ GT +G+F+V D+
Sbjct: 148 RVRLIGDILKTVPLVTGCIIAVMGTENTSGEFEVLDL 184
>gi|384499023|gb|EIE89514.1| hypothetical protein RO3G_14225 [Rhizopus delemar RA 99-880]
Length = 894
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 17 KNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEE 76
++L+ FR+ + YS+Q+A + R +K LN E
Sbjct: 147 ESLNDQFRVKQQTYSQQYAKV-------------PRYVEKV-----------LNTQPGEL 182
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-ID 135
C ++GT++ KPN+L ++ +E +V + SD D + LEDE R+ + G +
Sbjct: 183 CYMVGTIYLQMNKKPNVLNDLEDEETIVRPDTPAKYRSDEDVISLEDESGRVEITGACLS 242
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFKPRTTL 175
VTG++V I G V G F+V D+C P KP TTL
Sbjct: 243 KQFLVTGMIVGILGKEVATGTFEVIDICLPGVPPQKPLTTL 283
>gi|340522408|gb|EGR52641.1| hypothetical protein TRIREDRAFT_102401 [Trichoderma reesei QM6a]
Length = 504
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 7 KSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-------K 59
K R + YK L ++ Y +Q+ +Y +RL K++ + ++ W +
Sbjct: 20 KPPVRAPSAYKPLHSYALDKNRSYKQQYGDMYFLRLAKIKPAVEEVAAKAWQDTQIGGER 79
Query: 60 SVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SD 117
+ V ++ D+ + E C + GT++ +LKPNIL+++S++ L + SD SD
Sbjct: 80 AKRVDRVLDVRQG--ELCWVAGTVYMDMKLKPNILEDVSKDRWLSAPISSQKYYSDDGSD 137
Query: 118 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
+ +LED+ R+ L G+ + VTG ++A+ GT +G+F+V D+
Sbjct: 138 QTMLEDDSGRVRLVGDLLSTIPLVTGCIIAVMGTENTHGEFEVIDI 183
>gi|294900658|ref|XP_002777052.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239884506|gb|EER08868.1| DNA polymerase delta small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 498
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 35/212 (16%)
Query: 10 TRPTADYKNLSQCFR-----------LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG 58
TR +A Y++L FR L++ ++ Q+A Y RLN ++ ++ KW
Sbjct: 38 TRKSARYQDLCDSFRDDIRGSDDKLRLSACNFELQYASTYFARLNMLKNAIVEAAMAKW- 96
Query: 59 KSVSVLKLSDLNE-----TDTEECV---IIGTLFKHQQLKPNILKEISEELKLVP-QPQH 109
+ V+ L E TD E V I G + K +L+P++L EI + + P
Sbjct: 97 VATRVIPSDHLLEGIGHVTDRERGVTVAIYGCVVKEVKLRPSVLAEIQKTAGISGIHPAM 156
Query: 110 T--------HFVSDSDELILEDELQRIPL----HGNIDIHNQVTGVVVAIKGTPVGNGKF 157
T + SD D++ LED RI L +D++ G+V+A KGT G G F
Sbjct: 157 TSEGYSMTDSYASDEDKIYLEDSSSRIRLVVREGATVDLNRLCQGLVLAFKGT-RGRGCF 215
Query: 158 KVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
+V ++ P+ P+ S+ + +YV V
Sbjct: 216 EVDEMVCPLPLI-PKGIPSSRDAEYVGFVSGL 246
>gi|225562395|gb|EEH10674.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 565
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y +P+A Y LS R + Y +Q+A IY +RL +++ + W G +++
Sbjct: 24 YRQPSA-YSPLSTFVLPRGEMRHYQQQYADIYFLRLARLKPTVSEIAVAAWEGFNIAGEY 82
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL +IS+E P +V S++
Sbjct: 83 AKRVDRVLDVRQG--ELCWVAGTIYMDLPLKPNILDDISKEHWTAAPPVRRTYVDPSNQA 140
Query: 120 I----LEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+ LEDE R+ L G + + VTG +VA+ GT NG F+V D+
Sbjct: 141 LTKTMLEDESGRLQLTGTLLQSSLLVTGAIVAVLGTENANGDFEVIDI 188
>gi|209876912|ref|XP_002139898.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209555504|gb|EEA05549.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 46/204 (22%)
Query: 6 CKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-------- 57
C RP Y + FR ++ Q+ H V+ K++ L+ +KW
Sbjct: 4 CNFNIRPNVSYTDGCDRFRCIKYNFGHQYCHTCFVKFVKLKPLLVKASLRKWRHVAVSEI 63
Query: 58 --GKSVSVLKLSDLNETDTE--------------------------------ECVIIGTL 83
++S + D NE E EC+IIG +
Sbjct: 64 RTSDNISTIYFIDYNENIEENKDIMERKSSTEDIKENKIPLLLSLKELESDVECIIIGLI 123
Query: 84 FKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHGN---IDIHNQ 139
+K +L+P +L E +++ + + + T+F S +D+L +ED RI L +D
Sbjct: 124 YKEMKLRPTVLDEYLQDIDVETNENKITNFCSSTDKLYIEDTSSRICLSSPNNILDSSKY 183
Query: 140 VTGVVVAIKGTPVGNGKFKVSDVC 163
V+G ++A+KG +G F V+D C
Sbjct: 184 VSGTMIAVKGVQTDSGIFIVNDYC 207
>gi|239611589|gb|EEQ88576.1| DNA polymerase delta subunit 2 [Ajellomyces dermatitidis ER-3]
Length = 563
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLSDLNETDTEECVII 80
+ Y +Q+A IY +RL +++ + W G +++ V ++ D+ + E C +
Sbjct: 2 RHYQQQYADIYFLRLARLKPAVTEIAVASWEGFNIAGEYARRVDRVLDVRQG--ELCWVA 59
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE----LILEDELQRIPLHGNIDI 136
GT++ LKPNIL +IS+E P +V S++ +LEDE R+ L G +
Sbjct: 60 GTIYMDLPLKPNILDDISKEHWTAAPPSRKTYVDSSNQSLTKTMLEDESGRLQLTGTLLQ 119
Query: 137 HN-QVTGVVVAIKGTPVGNGKFKVSDV 162
+ VTG +VA+ GT NG F+V D+
Sbjct: 120 SSLLVTGAIVAVLGTENANGDFEVIDI 146
>gi|346327140|gb|EGX96736.1| DNA polymerase delta subunit 2 [Cordyceps militaris CM01]
Length = 513
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SV 63
R + YK L+ + Y +Q+ +Y +RL K++ + + W + V
Sbjct: 25 RDESSYKPLATFALDKQRSYKQQYGDMYFLRLTKIKPVVEQVAAAAWAGTTIGGETAGKV 84
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD--SDELIL 121
++ D+ + E C + GT++ LKPNIL+++S++ L + SD +D++ L
Sbjct: 85 DRVLDVRQG--ELCWVAGTVYMDMALKPNILEDVSKDRWLSAPISTQKYYSDDGTDQVTL 142
Query: 122 EDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
ED+ R+ L G++ VTG ++A+ GT +G+F+V D+ +
Sbjct: 143 EDDSGRVRLVGDVLKTVPLVTGCIIAVMGTENTSGEFEVLDLKF 186
>gi|453082073|gb|EMF10121.1| DNA polymerase delta subunit 2 [Mycosphaerella populorum SO2202]
Length = 498
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 24 RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG-------KSVSVLKLSDLNETDTEE 76
R + Y +Q+A +Y RL +++ L+ ++ + ++ V ++ D+ + +
Sbjct: 41 RGEGRHYQQQYADMYFARLAQLKPSLVRLATEAFQDYEIGGEQAKRVDRVLDVRQGNL-- 98
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-ID 135
C ++GT++ LKPN+L +I +E + P + +++LEDE R+ L G +
Sbjct: 99 CWVVGTIYMEMPLKPNVLDDIGKEHWIAAPPAREKYNGGEGQVMLEDESGRLRLTGGFLG 158
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDV 162
VTG +VA+ GT +G F+V DV
Sbjct: 159 SVVLVTGAIVAVLGTENSDGDFEVIDV 185
>gi|340914791|gb|EGS18132.1| DNA polymerase delta small subunit-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 526
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-----GKSVSVLK 65
R + YK L + + Y +Q+A IY +RL K++ + A + W G ++
Sbjct: 26 RVESKYKPLYKFNLPRHRQYHQQYADIYFLRLTKLKPAVEAVAREAWEDTMIGGEIARRV 85
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDE---LIL 121
L+ + C ++GT++ LKP++L++IS++ + + P T H+ D ++L
Sbjct: 86 ERVLDVRQGQLCWMVGTVYMDMPLKPSVLEDISKD-RWIGNPITTGHYFQDDGSGTTIML 144
Query: 122 EDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
ED+ RI L G+ + VTG ++A+ GT NG+F+V D+ +A
Sbjct: 145 EDDSGRIRLVGSRLQDFFLVTGCIIAVLGTENVNGEFEVIDLKFA 189
>gi|326472656|gb|EGD96665.1| DNA polymerase subunit delta-2 [Trichophyton tonsurans CBS 112818]
gi|326482101|gb|EGE06111.1| DNA polymerase subunit delta-2 [Trichophyton equinum CBS 127.97]
Length = 530
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 18 NLSQCFRL---ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--VLKLSD--L 69
N FRL A++ Y +Q++ IY +RL +++ + W G +++ ++ D L
Sbjct: 29 NPMGTFRLPPGAARHYQQQYSDIYFLRLTRLKPAVAEVAKAAWEGYNIAGEYARMVDRVL 88
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILEDEL 125
+ + I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++EDE
Sbjct: 89 DVRQGKLSWIVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVEDES 148
Query: 126 QRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 149 GRLVLTGSLLQSTFLVTGVVVAVLGTENADGQFEVVDI 186
>gi|449295481|gb|EMC91503.1| hypothetical protein BAUCODRAFT_79984 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 6 CKSYTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK-----S 60
+YT P A Y NL + ++ Y +Q+A +Y RL +++ + S+ W +
Sbjct: 22 ASTYT-PLATY-NLPKG---ENRHYQQQYADMYFARLAQLKPAVEKLASEAWAEFEIAGE 76
Query: 61 VSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD-EL 119
++ K L+ E C + GT++ LKPN+L++I +E + P + S +
Sbjct: 77 TALRKDRVLDVRQGELCWVAGTVYMEMPLKPNVLEDIGKEHWIAAPPPRIKYDSGIGLGI 136
Query: 120 ILEDELQRIPLHGNIDIHN--QVTGVVVAIKGTPVGNGKFKVSDV 162
+LEDE R+ L G +H VTG +VA+ GT +G F+V D+
Sbjct: 137 MLEDESGRLRLTGGF-LHECLLVTGAIVAVVGTENKDGDFEVLDL 180
>gi|149238157|ref|XP_001524955.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451552|gb|EDK45808.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 479
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TEECV 78
S+ Y KQ+ +Y RL ++ + + +KWG V + + + D + C
Sbjct: 38 TSRKYDKQYFSMYQYRLTHLKNRVTSNALKKWGDGVKTIDGQTIYKQDKILDIKSGKLCW 97
Query: 79 IIGTLFKHQQLKPNILKEISEE----LKLVPQPQHTHFVSDSDE---LILEDELQRIPLH 131
++GT+F + K NIL ++ + L LVP ++ ++DE ++LEDE R LH
Sbjct: 98 VVGTVFCDAKYKLNILNDVEKGTDDVLPLVP----VSYLDENDEQPVVMLEDESGRAVLH 153
Query: 132 GNIDIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
N + N+ VTG +VA+ G V G F++ DV Y P P+ LS +++
Sbjct: 154 -NEEFLNRNLLVTGCIVAVLGIEVQAGIFEIMDVAY--PECAPQKPLSPPQSR 203
>gi|327304261|ref|XP_003236822.1| DNA polymerase delta subunit [Trichophyton rubrum CBS 118892]
gi|326459820|gb|EGD85273.1| DNA polymerase delta subunit [Trichophyton rubrum CBS 118892]
Length = 552
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRL---ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRL A++ Y +Q++ IY +RL +++ + W G +++ V ++
Sbjct: 29 NPMDTFRLPPGAARHYQQQYSDIYFLRLTRLKPAVAEVAKAAWEGYNIAGEYARRVDRVL 88
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDS---DELILED 123
D+ + + I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++ED
Sbjct: 89 DVRQG--KLSWIVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVED 146
Query: 124 ELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
E R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 147 ESGRLVLTGSLLQSTFLVTGVVVAVLGTENADGQFEVVDI 186
>gi|315045352|ref|XP_003172051.1| DNA polymerase subunit delta-2 [Arthroderma gypseum CBS 118893]
gi|311342437|gb|EFR01640.1| DNA polymerase subunit delta-2 [Arthroderma gypseum CBS 118893]
Length = 552
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRL---ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRL ++ Y +Q++ IY +RL +++ + W G +++ V ++
Sbjct: 29 NPMGTFRLPPGGARHYQQQYSDIYFLRLTRLKPAVAEVARAAWEGYNIAGEYARRVDRVL 88
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDS---DELILED 123
D+ + E ++GT++ LKP+I+ +IS+E P PQ T+ +S + ++ED
Sbjct: 89 DVRQG--ELSWVVGTVYMELPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVED 146
Query: 124 ELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
E R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 147 ESGRLVLTGSLLQSSFLVTGVVVAVLGTENADGEFEVVDI 186
>gi|448121642|ref|XP_004204261.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
gi|358349800|emb|CCE73079.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
Length = 493
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS-------VSVLKLSDLNETDTEECVI 79
S+ Y QF +Y R ++E +L +WG V + K L+ + + C +
Sbjct: 45 SRKYEGQFFSMYQYRYGILKERVLQNAMARWGDGKKKIDGQVVIKKDKILDISSGQLCWV 104
Query: 80 IGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDELQRIPLHGNID 135
+GT++ + K NIL+++ + ++P+ ++ +SDE+ ++EDE R LH +
Sbjct: 105 VGTIYTEMKNKLNILQDVEMGVDDVLPEIPESYVDQESDEMPIVMIEDESGRAVLHNDDF 164
Query: 136 IHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
+ VTG +VAI G + G F++ DV Y P P+ L
Sbjct: 165 LKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PAMSPQKPL 204
>gi|302501704|ref|XP_003012844.1| hypothetical protein ARB_01095 [Arthroderma benhamiae CBS 112371]
gi|291176404|gb|EFE32204.1| hypothetical protein ARB_01095 [Arthroderma benhamiae CBS 112371]
Length = 574
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRLA---SKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRLA ++ Y +Q++ IY +RL +++ + W G +++ V ++
Sbjct: 31 NPMGTFRLAPGAARHYQQQYSDIYFLRLTRLKPAVAEVAKAAWEGYNIAGEYARRVDRVL 90
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDS---DELILED 123
D+ + + I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++ED
Sbjct: 91 DVRQG--KLSWIVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVED 148
Query: 124 ELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
E R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 149 ESGRLVLTGSLLQSTFLVTGVVVAVLGTENADGQFEVVDI 188
>gi|302662784|ref|XP_003023043.1| hypothetical protein TRV_02865 [Trichophyton verrucosum HKI 0517]
gi|291187019|gb|EFE42425.1| hypothetical protein TRV_02865 [Trichophyton verrucosum HKI 0517]
Length = 573
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRLA---SKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRLA ++ Y +Q++ IY +RL +++ + W G +++ V ++
Sbjct: 31 NPMGTFRLAPGAARHYQQQYSDIYFLRLTRLKPAVAEVAKAAWEGYNIAGEYARRVDRVL 90
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDS---DELILED 123
D+ + + I+GT++ LKP+I+ +IS+E P PQ T+ +S + ++ED
Sbjct: 91 DVRQG--KLSWIVGTVYMDLPLKPSIMDDISKENWTAAPVPQKTYNDPNSKKPTQTMVED 148
Query: 124 ELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
E R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 149 ESGRLVLTGSLLQSTFLVTGVVVAVLGTENADGQFEVVDI 188
>gi|341881730|gb|EGT37665.1| hypothetical protein CAEBREN_08130 [Caenorhabditis brenneri]
Length = 452
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 15 DYKNLSQCFRLASKD----YSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
DY+NLS + L +D +++Q+ +Y R+ +++ +L + GK K + L+
Sbjct: 10 DYENLSDRYVLTEQDKKDAFTRQYFEVYESRVKELKPRILENAERVIGKGK--YKFTQLS 67
Query: 71 ET-DTEECVIIGTLFKHQQLKPNILKEISEELKLV--------PQPQHTHFVSDSDELIL 121
E EE ++G + K + +P+ILK + E K+ Q + S D + L
Sbjct: 68 EAKQDEEVFVVGVIVKRIEARPSILKTLLNEDKVTYDDYEEDDGQAVKRYAGSSEDRIDL 127
Query: 122 EDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
E + Q + L G I + + TG V + G G F VS + + P+ + +
Sbjct: 128 ESDKQTVRLEGAISMDDCATGCCVGVLGKLGKEGTFHVSKLVWPAAKCAPKMS-AEGTIV 186
Query: 182 YVNHVD--AFTDDDFIRLWEGLFFSMWMS 208
+++ +D T+DD + + F S WM+
Sbjct: 187 FISGLDLSGDTEDDQLTISGFEFMSDWMN 215
>gi|403375590|gb|EJY87771.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 504
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD-LNETDTEECVIIGTLFKHQQLKP 91
Q+A Y +RL ++ + KW K + +++ L+ + VIIGT+FK LKP
Sbjct: 33 QYATFYWLRLQSLKPHVRESAELKWEKDQHLTYVTNILDIRPGQLTVIIGTIFKEMPLKP 92
Query: 92 NILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKG 149
+ILK + L + +H +V + D +LED RI L + + V+G ++ +KG
Sbjct: 93 SILKNVLGVLG-TQKFKHGLYVGEEDYAVLEDSSGRIRLKKGLKFNPDFFVSGSILGLKG 151
Query: 150 TPVGNGKFKVSDVCYATPVFK---PRTT-LSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
NG F+V D YA F P++ + N + Y + +F+ L GL F
Sbjct: 152 VVDTNGFFEVHDHTYAGIPFSEPLPKSVNIRNQRDLYSPEALSDPKREFVALVSGLEFG 210
>gi|403359564|gb|EJY79446.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 504
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSD-LNETDTEECVIIGTLFKHQQLKP 91
Q+A Y +RL ++ + KW K + +++ L+ + VIIGT+FK LKP
Sbjct: 33 QYATFYWLRLQSLKPHVRESAELKWEKDQHLTYVTNILDIRPGQLTVIIGTIFKEMPLKP 92
Query: 92 NILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKG 149
+ILK + L + +H +V + D +LED RI L + + V+G ++ +KG
Sbjct: 93 SILKNVLGVLG-TQKFKHGLYVGEEDYAVLEDSSGRIRLKKGLKFNPDFFVSGSILGLKG 151
Query: 150 TPVGNGKFKVSDVCYATPVFK---PRTT-LSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
NG F+V D YA F P++ + N + Y + +F+ L GL F
Sbjct: 152 VVDTNGFFEVHDHTYAGIPFSEPLPKSVNIRNQRDLYSPEALSDPKREFVALVSGLEFG 210
>gi|389623199|ref|XP_003709253.1| DNA polymerase delta small subunit [Magnaporthe oryzae 70-15]
gi|351648782|gb|EHA56641.1| DNA polymerase delta small subunit [Magnaporthe oryzae 70-15]
gi|440465856|gb|ELQ35156.1| DNA polymerase delta small subunit [Magnaporthe oryzae Y34]
gi|440486477|gb|ELQ66338.1| DNA polymerase delta small subunit [Magnaporthe oryzae P131]
Length = 497
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------SV 63
R + YK+L K Y +Q+ +Y +RL K++ + S +G V V
Sbjct: 27 RRQSSYKSLKTFALDKEKQYQQQYGDMYFLRLTKIKPAVEEIASTAFGDLVIGGEPARQV 86
Query: 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDS-DELIL 121
++ D+ + E C + GT++ LKP+IL++++++ + P +F D D ++L
Sbjct: 87 PRVLDVRQG--ELCWVAGTVYMDMPLKPSILEDVAKDRWISAPTSVQKYFSKDGRDSILL 144
Query: 122 EDELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
ED+ R+ L G+I VTG ++A+ GT +G+F+V D+ +
Sbjct: 145 EDDSGRVRLVGDILKSVVLVTGCIIAVMGTENASGEFEVIDLKF 188
>gi|296807268|ref|XP_002844189.1| DNA polymerase subunit delta-2 [Arthroderma otae CBS 113480]
gi|238843672|gb|EEQ33334.1| DNA polymerase subunit delta-2 [Arthroderma otae CBS 113480]
Length = 549
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 18 NLSQCFRL---ASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLS 67
N FRL ++ Y +Q++ IY +RL +++ + W G +++ V ++
Sbjct: 29 NPMGTFRLPAGGARHYQQQYSDIYFLRLTRLKPAVSEVAKSAWEGYNIAGEYARRVDRVL 88
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEE-LKLVPQPQHTHFVSDSD---ELILED 123
D+ + E ++GT++ LKP+I+ +IS+E P PQ T+ +S + ++ED
Sbjct: 89 DVRQG--ELSWVVGTVYMELPLKPSIMDDISKENWTAAPIPQKTYNDPNSTKPTQTMVED 146
Query: 124 ELQRIPLHGNI-DIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
E R+ L G++ VTGVVVA+ GT +G+F+V D+
Sbjct: 147 ESGRLVLTGSLLQSSFLVTGVVVAVLGTENADGEFEVVDI 186
>gi|164663045|ref|XP_001732644.1| hypothetical protein MGL_0419 [Malassezia globosa CBS 7966]
gi|159106547|gb|EDP45430.1| hypothetical protein MGL_0419 [Malassezia globosa CBS 7966]
Length = 218
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV-SDSDELILEDELQRIPLHGNI- 134
C+++GT + QLKP++L++I+ +L L P T +V ++ DEL LED+ R+ + G++
Sbjct: 76 CMVVGTFYSAMQLKPDVLQDIARDLSLPAPPPRTSYVDTEHDELFLEDQSGRVRVVGDLL 135
Query: 135 -----DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAF 189
VTGVV + G +G +V V + P P +S K +
Sbjct: 136 RPGTQLAQTCVTGVVACVIGIETPDGDLEVHHVFF--PGLPPTAAVSYLAAKQLPRPRTI 193
Query: 190 TDDDFIRL---WE 199
T F+++ WE
Sbjct: 194 TTSSFLQVVCTWE 206
>gi|429327599|gb|AFZ79359.1| DNA polymerase delta small subunit, putative [Babesia equi]
Length = 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 19 LSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG--KSVSVLK----LSDLNET 72
LS+ F+ Y+ Q+ RLN+++ +L V + W K S ++ ++ +
Sbjct: 14 LSKRFKKNGVPYTSQYHFRTVSRLNELKPIILKTVIRCWPDIKDESPIRDEYRIAHSVKD 73
Query: 73 DTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG 132
C++IGT++K + P+ L + + + T F +D D L LED+ QR+ + G
Sbjct: 74 AKGRCIVIGTVYKEMKRHPSPLNAYKHDFAFKKE-EITEFTNDDDYLTLEDQTQRLIITG 132
Query: 133 N-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATP 167
+ +D H +G+V+A+KG G F D +A P
Sbjct: 133 DFMDPHRFTSGMVLAMKGYITPEGLFNAEDYTFAGP 168
>gi|452980265|gb|EME80026.1| hypothetical protein MYCFIDRAFT_155847 [Pseudocercospora fijiensis
CIRAD86]
Length = 502
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 2 KNIECKSYTRPTADYKNLSQ--CFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWG- 58
K + + + R A Y LS R +K Y +Q+A +Y RL +++ + + S+ +
Sbjct: 18 KTTQYECHERSNAIYNPLSTFTLPRNEAKQYQQQYADMYFTRLAQLKPAVESIASEAFSD 77
Query: 59 ------KSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 112
++ V ++ D+ + C +IGT+F LKPN+L++I +E + P +
Sbjct: 78 FHIGGEQARKVDRVLDVRQGHL--CWVIGTVFVEMPLKPNVLEDIGKEHWIAAPPARQKY 135
Query: 113 VSDSD--ELILEDELQRIPLHGNIDIHN-QVTGVVVAIKGTPVGNGKFKVSDV 162
++LEDE R+ L G VTG +VA+ GT +G F+V D+
Sbjct: 136 NPGEGNVSMMLEDESGRLKLTGGFLASVLLVTGAIVAVLGTENSDGDFEVLDI 188
>gi|226292616|gb|EEH48036.1| DNA polymerase delta small subunit [Paracoccidioides brasiliensis
Pb18]
Length = 526
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 9 YTRPTADYKNLSQCF--RLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS--- 62
Y P+A Y LS R + + +Q+A IY +RL +++ + W G +++
Sbjct: 25 YRSPSA-YSPLSTFILPRGEMRHFQQQYADIYFLRLARLKPAVAEIAVASWEGFNIAGEY 83
Query: 63 ---VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL 119
V ++ D+ + E C + GT++ LKPNIL +IS+E P ++ S++
Sbjct: 84 ARRVDRVLDVRQG--ELCWVAGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQA 141
Query: 120 ----ILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
+LEDE R+ L G + VTG +VA+ GT NG F+V D+
Sbjct: 142 SAKTMLEDESGRLQLTGTLLQSALLVTGAIVAVLGTENVNGDFEVIDI 189
>gi|448532815|ref|XP_003870507.1| Hys2 DNA polymerase III (delta) subunit [Candida orthopsilosis Co
90-125]
gi|380354862|emb|CCG24378.1| Hys2 DNA polymerase III (delta) subunit [Candida orthopsilosis]
Length = 477
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TEECVI 79
S+ Y +Q+ +Y R NK+++ +KWG + + + D + C +
Sbjct: 39 SRKYDQQYFSMYQYRYNKLQKRAWTNAMKKWGNGTKKVDGQTITKQDKILDIVGGKLCWV 98
Query: 80 IGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE---LILEDELQRIPLHGNIDI 136
IGT+F + K NIL ++ V + ++ D DE ++LEDE R LH N D
Sbjct: 99 IGTVFVDAKYKLNILNDVERGTDDVLPLEPVSYL-DGDEQPVVMLEDESGRAILH-NEDF 156
Query: 137 HNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
Q VTG +VA+ G + G F++ DV Y P P+ LS+ + +
Sbjct: 157 LQQNLLVTGCIVAVLGIEIQAGIFEIMDVAY--PECAPQRPLSSADTR 202
>gi|145352809|ref|XP_001420728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580963|gb|ABO99021.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 429
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGK--SVSVLKLSDLNETDTEECVIIGTLFKHQQLK 90
Q+ +Y RL ++ +W + +VL+L + E CVI+GT++K + K
Sbjct: 4 QYFQLYFNRLQALKPRAREAARARWPTMPTRAVLELCE-----DEACVIVGTIYKDMKDK 58
Query: 91 PNILKEI-------SEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVTGV 143
P IL E +E + + + + D L EDE R+ L G +D VTGV
Sbjct: 59 PIILDEYVKGYGEEAEGAAATTREERATYTREDDGLEFEDEGARVKLLG-VDAGKFVTGV 117
Query: 144 VVAIKGTPVGNGKFKVSD-VCYATPV---FKPRTTLSNNENKYVNHVDAF 189
V A+KG V G F V D V YA P K + ++ KYV V F
Sbjct: 118 VCAVKGKAV-KGDFLVDDVVAYAPPTTGEAKKSKSEASTATKYVCLVSGF 166
>gi|398395611|ref|XP_003851264.1| hypothetical protein MYCGRDRAFT_45479 [Zymoseptoria tritici IPO323]
gi|339471143|gb|EGP86240.1| hypothetical protein MYCGRDRAFT_45479 [Zymoseptoria tritici IPO323]
Length = 502
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 30 YSKQFAHIYAVRLNKMR---ECLLARVSQKWGKSVSVLKLSD--LNETDTEECVIIGTLF 84
Y +Q+A +Y RL +++ E + A + S K D L+ C I+GT++
Sbjct: 46 YQQQYADMYFTRLAQLKPSVEAIAAEAFSDFEISGEAAKQVDRVLDVRQGTLCWIVGTIY 105
Query: 85 KHQQLKPNILKEISEELKLVPQPQHTHFV-SDSD-ELILEDELQRIPLHGN-IDIHNQVT 141
LKPN+L +I +E + P + D+D ++LEDE R+ L G + VT
Sbjct: 106 MEMPLKPNVLDDIGKEHWIAAPPAREKYADGDADIPMMLEDESGRLRLTGGFLRSVLLVT 165
Query: 142 GVVVAIKGTPVGNGKFKVSDV 162
G +VA+ GT +G F+V D+
Sbjct: 166 GAIVAVMGTENSDGDFEVLDI 186
>gi|452837166|gb|EME39108.1| hypothetical protein DOTSEDRAFT_159262 [Dothistroma septosporum
NZE10]
Length = 504
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK---SVSVLKLSD--LNETDTEECVII 80
+ K Y +Q+A +Y RL +++ + S+ +G + V + D L+ + C ++
Sbjct: 40 SQKHYQQQYADMYFTRLAQLKPAVEQIASEAFGDVEIAGEVCRKVDRVLDVRQGQLCWVV 99
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS--DSDELILEDELQRIPL-HGNIDIH 137
GT + LKPN+L +I +E + P + S + +LEDE R+ L G++
Sbjct: 100 GTCYMELPLKPNVLDDIGKEHWISAPPNREKYASANGQESFMLEDESGRLKLTGGSLQGF 159
Query: 138 NQVTGVVVAIKGTPVGNGKFKVSDV 162
VTG ++A+ GT +G F+V D+
Sbjct: 160 LLVTGAIIAVMGTENSDGDFEVLDL 184
>gi|448124019|ref|XP_004204814.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
gi|358249447|emb|CCE72513.1| Piso0_000093 [Millerozyma farinosa CBS 7064]
Length = 489
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKS-------VSVLKLSDLNETDTEECVI 79
S+ Y QF +Y R ++E +L +WG + + K L+ + + C +
Sbjct: 41 SRKYEGQFFSMYQYRYGILKERVLQNAMARWGDGKKKVDGQIVIKKDKILDISSGQLCWV 100
Query: 80 IGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDELQRIPLHGNID 135
+GT++ + K NIL+++ + ++P+ ++ +S+E+ ++EDE R LH +
Sbjct: 101 VGTIYTEMKNKLNILQDVEMGVDDVLPKIPESYVDQESEEMPIVMIEDESGRAVLHNDDF 160
Query: 136 IHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
+ VTG +VAI G + G F++ DV Y P P+ L
Sbjct: 161 LKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PAMSPQKPL 200
>gi|393911544|gb|EJD76356.1| hypothetical protein LOAG_16701 [Loa loa]
Length = 414
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQP-QHTHFVSDSDELILEDELQRIPLHGNI 134
+ ++IGT+ K +L+P++L++++EE ++PQP + + D + ED+ Q + L G+
Sbjct: 37 KVLVIGTIAKRVKLRPSVLRDLAEEQLILPQPVAEDKLIGEEDFVEFEDDDQIVRLSGDF 96
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFT 190
+ TG VV I G N F+V++V + + +P + N+++YV V F+
Sbjct: 97 VMDEFATGCVVGIYGMQFDNDIFQVNEVIWPSKAPQPTYPIL-NDDRYVVFVSGFS 151
>gi|150863804|ref|XP_001382402.2| DNA polymerase delta small subunit (Hydroxyurea sensitive protein
HYS2) [Scheffersomyces stipitis CBS 6054]
gi|149385060|gb|ABN64373.2| DNA polymerase delta small subunit (Hydroxyurea sensitive protein
HYS2) [Scheffersomyces stipitis CBS 6054]
Length = 487
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 9 YTRPT----ADYKNLSQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKWGKSV- 61
YTR + +DY + F +++KD Y +Q+ +Y R ++E ++ QKWG
Sbjct: 18 YTRTSFKDSSDYPKQEE-FIISAKDRKYDRQYFSMYQYRFKNLKERIIGNAIQKWGDGTK 76
Query: 62 -----SVLKLSD-LNETDTEECVIIGTLFKHQQLKPNIL----KEISEELKLVPQPQHTH 111
+++K L+ T + C ++GT+F + K NI K I + L LVP
Sbjct: 77 RVNGQTIVKQDKILDITSGKLCWVVGTVFCDLKDKLNIFQDVEKGIDDVLPLVPD----S 132
Query: 112 FVSDSDE---LILEDELQRIPLHGN--IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT 166
+V D + +LEDE R LH + + VTG +V + G + G F++ D+ Y
Sbjct: 133 YVGDDENSMTTMLEDESGRAILHNEEFLSKNILVTGCIVGVLGIEISAGIFEIMDIVYPE 192
Query: 167 PVFKPRTTLSNNENK 181
+ TL +E K
Sbjct: 193 ASPQKPLTLKASEGK 207
>gi|225680909|gb|EEH19193.1| DNA polymerase subunit delta-2 [Paracoccidioides brasiliensis Pb03]
Length = 738
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 28 KDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVS------VLKLSDLNETDTEECVII 80
+ + +Q+A IY +RL +++ + W G +++ V ++ D+ + E C +
Sbjct: 2 RHFQQQYADIYFLRLARLKPAVAEIAVASWEGFNIAGEYARRVDRVLDVRQG--ELCWVA 59
Query: 81 GTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL----ILEDELQRIPLHGN-ID 135
GT++ LKPNIL +IS+E P ++ S++ +LEDE R+ L G +
Sbjct: 60 GTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQASAKTMLEDESGRLQLTGTLLQ 119
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDV 162
VTG +VA+ GT NG F+V D+
Sbjct: 120 SALLVTGAIVAVLGTENVNGDFEVIDI 146
>gi|412985302|emb|CCO20327.1| predicted protein [Bathycoccus prasinos]
Length = 563
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 88/239 (36%), Gaps = 63/239 (26%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDT-------- 74
FR + KQ++ +Y RL + L +K+G SV + ++ +L T
Sbjct: 47 FRFEKEHMGKQYSSLYYQRLMVLLPGLKQSAREKFGTSVPLKRVIELGAAGTDNNKEDGK 106
Query: 75 --------------------------------------EECVIIGTLFKHQQLKPNILKE 96
EE VIIGT++K KP IL E
Sbjct: 107 GGGEKKESSAMMMMDVDDEDTLLQEQENKENKAAAALGEEVVIIGTIYKEMAKKPIILDE 166
Query: 97 -ISEELKLVPQPQHTHFVSDSDE---------LILEDELQRIPLHG-NIDIHNQVTGVVV 145
I + + + Q H + D +E ILEDE R+ L G + + VTGV
Sbjct: 167 YIKTKAGVTKKEQVEHGLMDLEENFVDEEKDFCILEDESARVKLQGPGVKVGELVTGVSA 226
Query: 146 AIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
A KG NG F V V +A P ++T V D + ++ L GL F
Sbjct: 227 ACKGRVNNNGDFVVDSVAFAKPSSSAKSTTK------VTEEDESGEQTYVCLVSGLNFG 279
>gi|440297741|gb|ELP90382.1| DNA polymerase delta small subunit, putative [Entamoeba invadens
IP1]
Length = 398
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSDLNETDTEECVIIG 81
F DYS+Q++ IY+ RL +R L + +K+ G SV + L + E +IG
Sbjct: 10 FETPKMDYSQQYSKIYSSRLTLLRPLLEVLIEKKYEGMSVQ----TRLTNIPSGETSLIG 65
Query: 82 TLFKHQQLKPNILKEISEELKLV----PQPQHTHFVSDSDELILEDELQRIPLHGNIDIH 137
T+FK + P +L + ++ K + QP F +D D LED + L ++
Sbjct: 66 TIFKKSKKLPTVLAQHKKDPKHIKIDFTQPP---FHADDDSAYLEDLIGHTDLVMKPEVL 122
Query: 138 NQVT-GVVVAIKGTPVGNGKFKVSDVCY 164
N +T G V+A+ GT G F V+DV +
Sbjct: 123 NTITSGTVIAVIGTINTEGFFNVTDVIF 150
>gi|392867633|gb|EAS29117.2| DNA polymerase delta subunit 2 [Coccidioides immitis RS]
Length = 559
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 21/157 (13%)
Query: 23 FRLAS---KDYSKQFAHIYAVRLNKMRECLLAR---------VSQKWGKSVSVLKLSDLN 70
FRL S + Y +Q+A IY +RL +++ + ++ + + V + L+
Sbjct: 36 FRLPSGKTRHYQQQYADIYFLRLARLKPAVAEIAAAEWEEFTIAGENARRVDRV----LD 91
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD----ELILEDELQ 126
E C ++GT++ LKPNIL +IS+E P ++ S+ + +LED
Sbjct: 92 VRQGELCWVVGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQGGTQTMLEDGSG 151
Query: 127 RIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
R+ L G + VTG VVA+ GT NG F+V DV
Sbjct: 152 RLRLTGTLLQSALLVTGAVVAVLGTENANGDFEVVDV 188
>gi|119177185|ref|XP_001240404.1| hypothetical protein CIMG_07567 [Coccidioides immitis RS]
Length = 542
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 23 FRLAS---KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVI 79
FRL S + Y +Q+A IY +RL +++ +V+ + ++ E E C +
Sbjct: 36 FRLPSGKTRHYQQQYADIYFLRLARLK------------PAVAEIAAAEWEEFTGELCWV 83
Query: 80 IGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD----ELILEDELQRIPLHGN-I 134
+GT++ LKPNIL +IS+E P ++ S+ + +LED R+ L G +
Sbjct: 84 VGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQGGTQTMLEDGSGRLRLTGTLL 143
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
VTG VVA+ GT NG F+V DV
Sbjct: 144 QSALLVTGAVVAVLGTENANGDFEVVDV 171
>gi|303316123|ref|XP_003068066.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107742|gb|EER25921.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320032434|gb|EFW14387.1| DNA polymerase delta subunit 2 [Coccidioides posadasii str.
Silveira]
Length = 559
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 23 FRLAS---KDYSKQFAHIYAVRLNKMRECLLAR---------VSQKWGKSVSVLKLSDLN 70
FRL S + Y +Q+A IY +RL +++ + ++ + + V + L+
Sbjct: 36 FRLPSGKTRHYQQQYADIYFLRLARLKPAVAEIAAAEWEEFTIAGENARRVDRV----LD 91
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD----ELILEDELQ 126
E C ++GT++ LKPNIL +IS+E P ++ S+ + +LED
Sbjct: 92 VRQGELCWVVGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQGGTQTMLEDGSG 151
Query: 127 RIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDV 162
R+ L G + + + VTG VVA+ GT NG F+V DV
Sbjct: 152 RLRLTGTL-LQSALLVTGAVVAVLGTENANGDFEVVDV 188
>gi|68467741|ref|XP_722029.1| hypothetical protein CaO19.11442 [Candida albicans SC5314]
gi|68468060|ref|XP_721869.1| hypothetical protein CaO19.3960 [Candida albicans SC5314]
gi|46443811|gb|EAL03090.1| hypothetical protein CaO19.3960 [Candida albicans SC5314]
gi|46443976|gb|EAL03254.1| hypothetical protein CaO19.11442 [Candida albicans SC5314]
Length = 474
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TEECV 78
+S+ Y+KQ+ +Y RL +R+ + +KWG + + + + D + C
Sbjct: 35 SSRKYAKQYFSMYQYRLKNLRDRVHKTAMEKWGHGTKKINGNTIEKQDKILDIASGKLCW 94
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGNIDI 136
+IGT+F + K +IL ++ + V + +V++ ++ ++LEDE R L+ + +
Sbjct: 95 VIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVNEDEQPIVMLEDESGRAILNNDNFL 154
Query: 137 HNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
VTG +VA+ G + G F++ D+ Y P P+ L ENK
Sbjct: 155 AKNLLVTGCIVAVLGIEIQAGIFEIMDIAY--PDCAPQKPLPLGENK 199
>gi|238882848|gb|EEQ46486.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 474
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TEECV 78
S+ Y+KQ+ +Y RL +R+ + +KWG + + + + D + C
Sbjct: 35 GSRKYAKQYFSMYQYRLKNLRDRVHKTAMEKWGHGTKKINGNTIEKQDKILDIASGKLCW 94
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGNIDI 136
+IGT+F + K +IL ++ + V + +V++ ++ ++LEDE R L+ + +
Sbjct: 95 VIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVNEDEQPIVMLEDESGRAILNNDNFL 154
Query: 137 HNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
VTG +VA+ G + G F++ D+ Y P P+ L ENK
Sbjct: 155 AKNLLVTGCIVAVLGIEIQAGIFEIMDIAY--PDCAPQKPLPLGENK 199
>gi|17539782|ref|NP_502177.1| Protein F12F6.7 [Caenorhabditis elegans]
gi|13431470|sp|Q19366.1|DPOD2_CAEEL RecName: Full=Probable DNA polymerase delta small subunit
gi|3875793|emb|CAA97785.1| Protein F12F6.7 [Caenorhabditis elegans]
Length = 451
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 15 DYKNLSQCFRLASKD----YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-VSVLKLSDL 69
+YKN+S + L KD +++Q+ +Y RL +++ +L ++ GK + +LSD
Sbjct: 10 NYKNVSDRYILTEKDKKGAFTRQYFEVYEARLKELKPRILENAEREIGKGKFTHSQLSDA 69
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT---------HFVSDSDELI 120
+ EE ++G + K +P+ILK + E K+ + S D +
Sbjct: 70 KQD--EEIFVVGVIVKRIAARPSILKSLLNEDKVAYDDYEEDAEEDEVKRYAGSIEDRIE 127
Query: 121 LEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNEN 180
LE + Q + L GNI + TG V + G G F V+ + + + V P+ +
Sbjct: 128 LESDKQTVRLEGNISMDECATGCCVGVLGKLGKEGVFHVNRLVWPS-VKVPKKVAVDGTI 186
Query: 181 KYVNHVDAFTD--DDFIRLWEGLFFSMWMS 208
+V+ +D D DD + + F + WM+
Sbjct: 187 AFVSGLDLTGDLEDDRLTISGLEFMADWMN 216
>gi|428179386|gb|EKX48257.1| DNA polymerase delta small subunit [Guillardia theta CCMP2712]
Length = 458
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 18 NLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEEC 77
+ S F K + Q+A +Y +RL ++ LL K ++ DL ++
Sbjct: 25 DFSTKFVTQQKSLAAQYADVYYLRLMTLKHGLLDEARSKCKVYKPANRILDLEVG--QKS 82
Query: 78 VIIGTLFKHQQLKPNILKEISEELKLVPQP--QHTHFVSDSDELILEDELQRIPL---HG 132
+I+GTL K + +PNIL E +++++ + + H+ SD D +I+EDE R+ L
Sbjct: 83 MIVGTLLKVMKFRPNILDEFNKDVENISNESFKRNHYSSDDDYVIMEDESGRVNLRFPED 142
Query: 133 NIDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
N VTGV++A G +G F+V ++
Sbjct: 143 NNMARMLVTGVILAAYGQLGEDGTFQVDEL 172
>gi|190346775|gb|EDK38941.2| hypothetical protein PGUG_03039 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 15 DYKNLSQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-----VSVLKLS 67
D N Q F L KD Y+ Q+ +Y RL+ +++ + KWG ++K
Sbjct: 24 DNYNKEQDFSLKLKDRTYNSQYFSMYQYRLSVLKDRVDQNAIWKWGDGDKRVDGQIIKRK 83
Query: 68 D--LNETDTEECVIIGTLFKHQQLKPNILKEISEEL-KLVPQPQHTHFVSDSDE-LILED 123
+ L+ E C + GT+F K NILK++ + ++P+ + ++ D L+LED
Sbjct: 84 EKILDIESGEMCWVSGTIFSDMNNKQNILKDVENGVDDVLPKAKQSYVSGDVPPVLMLED 143
Query: 124 ELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
+ R LH + + VTG VA+ G V G F++ DV Y PV P+ L
Sbjct: 144 DSGRAILHNDDFLKKNLLVTGCFVAVLGIEVQAGIFEILDVVY--PVISPQLPL 195
>gi|358060202|dbj|GAA93956.1| hypothetical protein E5Q_00602 [Mixia osmundae IAM 14324]
Length = 601
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
E C++ GT++ +LKP++L EI+ + + P + DE++LED RI L G
Sbjct: 213 ELCIVAGTIYVEMKLKPSVLDEIAIDYSIPAAPPRKYVTPGVDEVLLEDSSGRIRLIGTG 272
Query: 135 DIHNQ---VTGVVVAIKGTPVGNGKFKVSDVCYATP 167
+ VTG++V++ G G F+V D+ + P
Sbjct: 273 IEQGKWALVTGIIVSVLGAETATGDFEVLDLIFPGP 308
>gi|344231946|gb|EGV63825.1| hypothetical protein CANTEDRAFT_130212 [Candida tenuis ATCC 10573]
Length = 478
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 23 FRLAS--KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-----SVLKLSD--LNETD 73
F LA+ + Y QF+ +Y R+N ++ + + KWG +++ D LN T
Sbjct: 36 FDLANTGRRYDHQFSSMYQSRMNSLKSRVDEQAMAKWGNGTLKRDGQIIQKVDRILNITS 95
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDELI-LEDELQRIPLH 131
+ C + GT+F K NIL ++ ++PQ ++ D E++ LEDE R L
Sbjct: 96 NKLCWVSGTVFCDLGNKLNILNDVKGGTDDVLPQIPDSYRSQDVGEVVMLEDESGRAVLE 155
Query: 132 GNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
G+ VTGV+VA+ G + G F++ DV Y P P+ +L
Sbjct: 156 GDEFFKENILVTGVIVAVLGIELQAGVFEIIDVIY--PSVAPQRSL 199
>gi|344300780|gb|EGW31101.1| hypothetical protein SPAPADRAFT_63028 [Spathaspora passalidarum
NRRL Y-27907]
Length = 427
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 2 KNIECKSYTRPTADYKNLSQCFRLA--SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK 59
+N+ RPT+ N + F L ++Y+ Q+ +Y R + ++ A+ KWG
Sbjct: 7 QNLTNPLLIRPTSKI-NPGEEFLLPPQGRNYNHQYYTMYQHRFSALKSRTEAKALAKWGN 65
Query: 60 SV------SVLKLSD-LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHF 112
++ K L+ + C +IGT++ K NILK++ + V +
Sbjct: 66 GQHDIDGQTIFKQDKILDIVSGKLCWVIGTVYIDAPGKLNILKDVENGVDDVLPGVPEAY 125
Query: 113 VSDSDE--LILEDELQRIPLHGN--IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV 168
VS+ + ++LEDE R LHG+ +D + VTG VV + G V G F++ DV Y
Sbjct: 126 VSEENTGVVMLEDESGRAILHGSEFLDKNLLVTGCVVGVLGIEVQAGVFEIMDVVYPASA 185
Query: 169 FKPRTTLSNNENKYV 183
+ + + N +K V
Sbjct: 186 PQSKRAVDNEPSKIV 200
>gi|241956019|ref|XP_002420730.1| DNA polymerase III (delta) small subunit, putative [Candida
dubliniensis CD36]
gi|223644072|emb|CAX41815.1| DNA polymerase III (delta) small subunit, putative [Candida
dubliniensis CD36]
Length = 474
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TEECV 78
S+ Y+KQ+ +Y RL +R+ +KWG + + + + D + C
Sbjct: 35 GSRKYAKQYFSMYQYRLKNLRDRAHKTAMEKWGHGTKKINGNMIEKQDKILDIASGKLCW 94
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE--LILEDELQRIPLHGN--I 134
+IGT+F + K +IL ++ + V + +V +++ ++LEDE R L+ + +
Sbjct: 95 VIGTVFCDAKYKLDILNDVEKGTDDVLPLEPVTYVDKNEQPIVMLEDESGRAILNNDNFL 154
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENK 181
+ VTG +VA+ G V G F++ D+ Y P P+ L+ ENK
Sbjct: 155 TKNLLVTGCIVAVLGIEVQAGIFEIMDIAY--PDCAPQKPLTLGENK 199
>gi|213410357|ref|XP_002175948.1| DNA polymerase subunit delta-2 [Schizosaccharomyces japonicus
yFS275]
gi|212003995|gb|EEB09655.1| DNA polymerase subunit delta-2 [Schizosaccharomyces japonicus
yFS275]
Length = 452
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGT 82
F L + Y++Q+A IY RLNK+ + KW K + ++ ++ + + I+GT
Sbjct: 17 FVLDTNSYNQQYASIYFARLNKLMPRTIDAARTKWPKYKQLDRVLEVKK--DQVAWIVGT 74
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSD------ELILEDELQRIP-LHGNID 135
++ LKPN+L +++ + + + +V+ ++ + +ED R+ + ++
Sbjct: 75 VYLSLALKPNVLADVTSTHTINTELDDSLYVNPNEADPSNMKCFIEDGFGRVECVLSSVI 134
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYA 165
+N VTGVVVA G G F V DVC A
Sbjct: 135 PYNLVTGVVVAALGHEDEQGLFLVQDVCTA 164
>gi|91085255|ref|XP_973402.1| PREDICTED: similar to AGAP002684-PA [Tribolium castaneum]
gi|270008451|gb|EFA04899.1| hypothetical protein TcasGA2_TC014963 [Tribolium castaneum]
Length = 570
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
FT+DDF+RLW+GLF+SMWMSDKPL+Q
Sbjct: 71 FTEDDFLRLWKGLFYSMWMSDKPLVQ 96
>gi|320590996|gb|EFX03435.1| DNA polymerase delta subunit [Grosmannia clavigera kw1407]
Length = 532
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 11 RPTADYKNLSQCFRLAS-KDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV-------S 62
R + Y++L Q FRLAS + Y +QF +Y +RL K++ + + +G +
Sbjct: 24 RSQSAYRSL-QRFRLASDRPYQQQFGDMYFLRLAKIKPAVEKVAVEAFGDVIVAGEPPKQ 82
Query: 63 VLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS-DSDE--- 118
V ++ D+ + E C + GT++ KP+IL ++S++ L P ++ D D+
Sbjct: 83 VDRVLDVRQG--EFCWVAGTVYMDMPFKPSILDDVSKDRLLSLPPDVKKYIPEDGDDDLL 140
Query: 119 --------LILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
++LEDE RI L G + VTG + A+ GT NG+ +V D+ +
Sbjct: 141 AEGRGSVSVMLEDESGRIRLVGKALRSVLLVTGCIAAVMGTENENGELEVLDIVF 195
>gi|242808483|ref|XP_002485173.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715798|gb|EED15220.1| DNA polymerase delta subunit 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 493
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 77 CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS----DSDELILEDELQRIPLHG 132
C + GT++ LKPNIL +++++ P T ++ D +++LEDE R+ + G
Sbjct: 45 CWVTGTVYMDLPLKPNILDDVAKDNYAAAPPPRTTYIDPLNPDKTQVMLEDESGRLRMTG 104
Query: 133 N-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNE 179
+ + VTGV++A+ GT NG F+V D+ PV PR L++ +
Sbjct: 105 TMLRTTHLVTGVIIAVLGTENSNGDFEVIDIKVPDFPVQPPRWELASTD 153
>gi|295672612|ref|XP_002796852.1| DNA polymerase subunit delta-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282224|gb|EEH37790.1| DNA polymerase subunit delta-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 576
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 19 LSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECV 78
LSQ R+ S + +QF +R E A ++ ++ + V + L+ E C
Sbjct: 60 LSQLVRMVSDNPEEQF-----LRPPSDEEEDYAPIAGEYARRVDRV----LDVRQGELCW 110
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDEL----ILEDELQRIPLHGN- 133
+ GT++ LKPNIL +IS+E P ++ S++ +LEDE R+ L G
Sbjct: 111 VAGTVYMDLPLKPNILDDISKEHWTAAPPSRKTYLDPSNQASAKTMLEDESGRLQLTGTL 170
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDV 162
+ VTG +VA+ GT NG F+V D+
Sbjct: 171 LQSALLVTGAIVAVLGTENVNGDFEVIDI 199
>gi|123454576|ref|XP_001315040.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897705|gb|EAY02817.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 388
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEE-CVIIG 81
F S ++QF +IY RL ++R + ++V K LN+ + ++ C IIG
Sbjct: 10 FHTKSNYTNRQFFNIYQDRLKQLRPLIESQVEGVLCKQ--------LNQMEPDKPCTIIG 61
Query: 82 TLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQVT 141
L+K+ + NIL E +++ Q SD D L LEDE R+ L G + + VT
Sbjct: 62 VLYKNLSSRQNILDEY-KDIGYESQAPEELTQSDKDTLFLEDESGRVQLVG-LQNNEFVT 119
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKP 171
G+V+ ++G P + F+V+ V Y P + P
Sbjct: 120 GIVIGVQGVPSAS-TFEVTKVIY--PQYNP 146
>gi|294659973|ref|XP_462427.2| DEHA2G20350p [Debaryomyces hansenii CBS767]
gi|199434373|emb|CAG90937.2| DEHA2G20350p [Debaryomyces hansenii CBS767]
Length = 487
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 23 FRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD-------TE 75
+ + Y KQF +Y RL+ +++ + KWG + + + D +
Sbjct: 37 LKAKERKYDKQFYSMYQYRLSILKQSVDNNALNKWGDGTKKVNGQTVTKRDKILDISSGQ 96
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDEL---ILEDELQRIPLH 131
C + GT+F + K NIL+++ + ++P+ T+ +S+ E+ +LEDE R L+
Sbjct: 97 LCWVSGTIFSDMKNKLNILQDVENGVDDVLPKVPETYTLSEVKEMPVVMLEDESGRAILN 156
Query: 132 GNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
+ + VTG +VAI G + G F++ DV Y P P+ L
Sbjct: 157 NDDFLKKNILVTGCIVAILGIEIQAGIFEIMDVVY--PSVSPQKPL 200
>gi|170033118|ref|XP_001844426.1| nnp-1 protein [Culex quinquefasciatus]
gi|167873540|gb|EDS36923.1| nnp-1 protein [Culex quinquefasciatus]
Length = 670
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFTD DF+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 89 AFTDADFLRLWKGLFYCMWMSDKPLIQE 116
>gi|255723331|ref|XP_002546599.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130730|gb|EER30293.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 477
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 26 ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV------SVLKLSD-LNETDTEECV 78
++ YSKQ+ +Y RL ++ + +KWG ++++ + L+ T + C
Sbjct: 39 GNRKYSKQYFSMYQYRLKNLKPRVEEIAMKKWGNGTQEIDGQTIVRTNKILDITSGKLCW 98
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDE---LILEDELQRIPLHGNID 135
++GT++ + K NIL ++ + V P ++ D DE ++LEDE R LH +
Sbjct: 99 VVGTVYCDAKYKLNILDDVEKGTDDVMPPVPVTYM-DGDESPIMMLEDESGRAILHNDEY 157
Query: 136 IHNQ--VTGVVVAIKGTPVGNGKFKVSDVCY 164
+ VTG +VA+ G + G F++ DV Y
Sbjct: 158 LKKNLLVTGCIVAVLGMELQAGIFEIMDVVY 188
>gi|422294284|gb|EKU21584.1| polymerase delta regulatory subunit [Nannochloropsis gaditana
CCMP526]
Length = 163
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV--------- 61
R T Y Q FR ++ +++Q++H+Y RL MR L A + KWG
Sbjct: 48 RVTLSYTPTYQRFRAKARTFTQQYSHMYTNRLRLMRPMLEAAATAKWGTGAPDGKEGEDA 107
Query: 62 -----SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQP 107
++ L D T ++IGT+FK L+P++L E +E L +P
Sbjct: 108 PTLCQKIIDLVDGART----SMVIGTIFKDMPLRPSLLDEYRDEAALQARP 154
>gi|157115356|ref|XP_001652569.1| nnp-1 protein (novel nuclear protein 1) (nop52) [Aedes aegypti]
gi|108876941|gb|EAT41166.1| AAEL007158-PC [Aedes aegypti]
Length = 697
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 26/28 (92%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFTD DF+RLW+GLF+ MWMSDKPL+Q+
Sbjct: 87 AFTDTDFLRLWKGLFYCMWMSDKPLVQE 114
>gi|157115352|ref|XP_001652567.1| nnp-1 protein (novel nuclear protein 1) (nop52) [Aedes aegypti]
gi|157115354|ref|XP_001652568.1| nnp-1 protein (novel nuclear protein 1) (nop52) [Aedes aegypti]
gi|108876939|gb|EAT41164.1| AAEL007158-PA [Aedes aegypti]
gi|108876940|gb|EAT41165.1| AAEL007158-PB [Aedes aegypti]
Length = 626
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 26/28 (92%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFTD DF+RLW+GLF+ MWMSDKPL+Q+
Sbjct: 87 AFTDTDFLRLWKGLFYCMWMSDKPLVQE 114
>gi|118399515|ref|XP_001032082.1| hypothetical protein TTHERM_00691170 [Tetrahymena thermophila]
gi|89286420|gb|EAR84419.1| hypothetical protein TTHERM_00691170 [Tetrahymena thermophila
SB210]
Length = 488
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 45/218 (20%)
Query: 16 YKNLSQCFRL--ASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETD 73
YKN+S+ F L + K Y Q+ Y RL++++E ++ S++ S+ + LN
Sbjct: 34 YKNVSEQFILKDSQKKYDIQYWKTYFKRLDQIKEYFMSNFSEE---SIPICD-KILNIKV 89
Query: 74 TEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN 133
E V+I TL+K +LKPN+L +S+ Q ++++D D + +ED+ R+ L N
Sbjct: 90 GEHQVVIATLYKDMKLKPNVLT-VSQ--------QRDNYMADDDVIYMEDQTGRMQLAFN 140
Query: 134 -------------IDIHNQVTGVVVAIKGTP--VGNGKFKVSDV-CYATP---------- 167
ID+ N +G+VV I+G F+V ++ C P
Sbjct: 141 NTQFKSSISKPKTIDVKNLTSGLVVGIRGIQRVAEINVFEVEEIYCCDLPHQEHILKIPA 200
Query: 168 --VFKPRTTLSNNENKY--VNHVDAFTDDDFIRLWEGL 201
+ + L NN N + +++ + D FI L GL
Sbjct: 201 PLTYGDDSHLENNNNFHDLSHYIKNYQDHKFILLTSGL 238
>gi|268536488|ref|XP_002633379.1| Hypothetical protein CBG06130 [Caenorhabditis briggsae]
Length = 450
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 13 TADYKNLSQCFRLASKD----YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-VSVLKLS 67
T +YKN+S + L +D +++Q+ IY R+ +++ +L + GK + LS
Sbjct: 8 TLNYKNVSDRYVLTEEDKKGAFARQYFEIYEARVKELKPRILDNAERVIGKGKFKHVLLS 67
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLV-------PQPQHTHFVSDSDELI 120
D + EE I G + K +P+ILK + E K+ + S D +
Sbjct: 68 DAKQ--DEEIFITGVIVKRVLARPSILKSLLSEDKVAYDNVDDGEDDVKRYAGSSEDRIE 125
Query: 121 LEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY-ATPVFKPRTTLSNNE 179
LE E Q + L G I + + TG V + G G F VS + + A V K TT
Sbjct: 126 LESEKQTVRLEGAISMEDCATGCCVGVLGKLGKEGVFHVSRLVWPAANVTKKATT--EGT 183
Query: 180 NKYVNHVDAFTDDDFIRLW-EGL-FFSMWMS 208
+++ +D D + RL GL F S WM+
Sbjct: 184 LVFISGLDLSGDIEQDRLTISGLEFMSDWMN 214
>gi|170061747|ref|XP_001866370.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
gi|167879867|gb|EDS43250.1| DNA polymerase delta small subunit [Culex quinquefasciatus]
Length = 237
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 85 KHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRI 128
KH +LKPNIL+EISEE +L PQP + + + D LILED LQ I
Sbjct: 47 KHHELKPNILREISEEGQLAPQPPRSRYTIEGDILILEDALQHI 90
>gi|361124771|gb|EHK96842.1| putative DNA polymerase subunit delta-2 [Glarea lozoyensis 74030]
Length = 318
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 36/180 (20%)
Query: 3 NIECKSYTRPTADYKNLSQCFRLA-SKDYSKQFAHIYAVRLNKMRECLLARVSQKW---- 57
N + TR T Y F LA K Y +QFA +Y RL ++ + + W
Sbjct: 15 NTSHPALTRSTTSYIP-HHNFSLAKEKQYQQQFADMYFYRLAILKPAVEKVAGEAWDGFQ 73
Query: 58 -GKSVSVLKLSD-LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSD 115
G+ V V K+ + L C IIGT+F LKPNIL +IS+
Sbjct: 74 IGQDV-VQKVDNVLGVRQGNLCWIIGTIFMDMPLKPNILDDISK---------------- 116
Query: 116 SDELILEDELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRT 173
+D+ RI L G+ + N+ VTG +VA+ GT NG+F+V D+ P P++
Sbjct: 117 ------DDKSGRIRLVGHA-LENEMLVTGCIVAVMGTENSNGEFEVVDI--KVPGLPPQS 167
>gi|146418689|ref|XP_001485310.1| hypothetical protein PGUG_03039 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 15 DYKNLSQCFRLASKD--YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-----VSVLKLS 67
D N Q F L KD Y+ Q+ +Y RL +++ + KWG ++K
Sbjct: 24 DNYNKEQDFSLKLKDRTYNLQYFSMYQYRLLVLKDRVDQNAIWKWGDGDKRVDGQIIKRK 83
Query: 68 D--LNETDTEECVIIGTLFKHQQLKPNILKEISEELK-LVPQPQHTHFVSDSDE-LILED 123
+ L+ E C + GT+F K NILK++ + ++P+ + ++ D L+LED
Sbjct: 84 EKILDIESGEMCWVSGTIFLDMNNKQNILKDVENGVDDVLPKAKQSYVSGDVPPVLMLED 143
Query: 124 ELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTL 175
+ R LH + + VTG VA+ G V G F++ DV Y PV P+ L
Sbjct: 144 DSGRAILHNDDFLKKNLLVTGCFVAVLGIEVQAGIFEILDVVY--PVISPQLPL 195
>gi|125987155|ref|XP_001357340.1| GA11606 [Drosophila pseudoobscura pseudoobscura]
gi|54645671|gb|EAL34409.1| GA11606 [Drosophila pseudoobscura pseudoobscura]
Length = 654
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 29/33 (87%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
N +FT+DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 69 ANSSFSFTEDDFLRIWKGLYYNMWMSDKPLVQE 101
>gi|195155977|ref|XP_002018877.1| GL25715 [Drosophila persimilis]
gi|194115030|gb|EDW37073.1| GL25715 [Drosophila persimilis]
Length = 657
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 29/33 (87%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
N +FT+DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 69 ANSSFSFTEDDFLRIWKGLYYNMWMSDKPLVQE 101
>gi|195434274|ref|XP_002065128.1| GK15286 [Drosophila willistoni]
gi|194161213|gb|EDW76114.1| GK15286 [Drosophila willistoni]
Length = 635
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 29/33 (87%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
N +FT+DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 69 ANSSFSFTEDDFLRIWKGLYYNMWMSDKPLVQE 101
>gi|345485112|ref|XP_001603095.2| PREDICTED: ribosomal RNA processing protein 1 homolog [Nasonia
vitripennis]
Length = 677
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFT+ DF+RLW+GLF+ MWMSDKPL+Q+
Sbjct: 100 AFTEADFLRLWKGLFYCMWMSDKPLVQE 127
>gi|84995054|ref|XP_952249.1| DNA polymerase delta small subunit [Theileria annulata strain
Ankara]
gi|65302410|emb|CAI74517.1| DNA polymerase delta small subunit, putative [Theileria annulata]
Length = 437
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 76 ECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-I 134
+CV+IGT+FK + P+ L E ++ + + Q + D D L LED QR+ L GN +
Sbjct: 77 KCVVIGTIFKQMKNHPSPLDEYIQKFDIKVE-QRLEYTDDDDYLFLEDHTQRLVLVGNCL 135
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSN--NENKYV 183
+ H V+G+V+A++G KF D Y P L N +E K++
Sbjct: 136 NPHKFVSGLVIAVRGYMNDENKFVTED--YILPEVPDTLALYNIKDEEKFI 184
>gi|403339974|gb|EJY69249.1| Archaeal DNA polymerase II, small subunit/DNA polymerase delta,
subunit B [Oxytricha trifallax]
Length = 497
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 16 YKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVS----------VLK 65
Y +L+ FR+ K Q+A Y RL+ +++ + + + W K+ + +
Sbjct: 41 YTDLNDKFRVTDKRDLIQYATFYYKRLSLLKDMVQRKSHELWHKNETYQNNGTGLCYLQN 100
Query: 66 LSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDSDELILEDE 124
+ D+ T V+IGTLFK LKP IL + + ++ + + S D L+LED
Sbjct: 101 ILDIQPYMT--TVLIGTLFKEMPLKPCILSNL---VGVISDDKSVDRYCSPEDYLVLEDS 155
Query: 125 LQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYA 165
RI + I+ VTG +V G NG F+V D C+A
Sbjct: 156 SGRIKIKKQRKINPDEFVTGAIVGFLGQVDKNGNFEVYDFCFA 198
>gi|308491108|ref|XP_003107745.1| hypothetical protein CRE_12625 [Caenorhabditis remanei]
gi|308249692|gb|EFO93644.1| hypothetical protein CRE_12625 [Caenorhabditis remanei]
Length = 452
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 15 DYKNLSQCFRLASKD----YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-VSVLKLSDL 69
DYKN+S + L +D +++Q+ +Y R+N ++ ++ + GK + LSD
Sbjct: 10 DYKNISDRYVLTEEDKKGAFARQYFEVYEARVNALKPRIIEIAERDIGKGKFKHISLSDA 69
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT--------HFVSDSDELIL 121
+ EE +IG + K +P+ILK + E K+ + S D + L
Sbjct: 70 KQD--EEIFVIGVIVKRIAARPSILKSLLNEDKVAYDDYEGDEEDDVKRYAGSSEDRIEL 127
Query: 122 EDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
E E Q + L G I + TG V + G G F V+ + +
Sbjct: 128 ESEKQTVRLDGAITMDECATGCCVGVLGKLGKEGVFHVNRLIW 170
>gi|328783124|ref|XP_395937.4| PREDICTED: ribosomal RNA processing protein 1 homolog [Apis
mellifera]
Length = 695
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+ DF+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 74 TFTEADFMRLWKGLFYCMWMSDKPLIQE 101
>gi|308446195|ref|XP_003087117.1| hypothetical protein CRE_30357 [Caenorhabditis remanei]
gi|308261965|gb|EFP05918.1| hypothetical protein CRE_30357 [Caenorhabditis remanei]
Length = 440
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 15 DYKNLSQCFRLASKD----YSKQFAHIYAVRLNKMRECLLARVSQKWGKS-VSVLKLSDL 69
DYKN+S + L +D +++Q+ +Y R+N ++ ++ + GK + LSD
Sbjct: 10 DYKNVSDRYVLTEEDKKGAFARQYFEVYEARVNALKPRIIEIAERDIGKGKFKHISLSDA 69
Query: 70 NETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT--------HFVSDSDELIL 121
+ EE +IG + K +P+ILK + E K+ + S D + L
Sbjct: 70 KQD--EEIFVIGVIVKRIAARPSILKSLLNEDKVAYDDYEGDEEDDVKRYAGSSEDRIEL 127
Query: 122 EDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
E E Q + L G I + TG V + G G F V+ + +
Sbjct: 128 ESEKQTVRLDGAISMDECATGCCVGVLGKLGKEGVFHVNRLIW 170
>gi|195578948|ref|XP_002079324.1| GD22068 [Drosophila simulans]
gi|194191333|gb|EDX04909.1| GD22068 [Drosophila simulans]
Length = 686
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 76 FNEDDFMRIWKGLYYTMWMSDKPLVQE 102
>gi|321479028|gb|EFX89984.1| hypothetical protein DAPPUDRAFT_205172 [Daphnia pulex]
Length = 301
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
DAF++D+ ++LW+GLF+ MWMSDKPLIQ+
Sbjct: 63 DAFSEDELMKLWKGLFYCMWMSDKPLIQE 91
>gi|380012892|ref|XP_003690507.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Apis florea]
Length = 636
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+ DF+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 74 TFTEADFMRLWKGLFYCMWMSDKPLIQE 101
>gi|21356169|ref|NP_651976.1| Nnp-1 [Drosophila melanogaster]
gi|14194975|sp|Q9VJZ7.1|RRP1L_DROME RecName: Full=Ribosomal RNA processing protein 1 homolog; AltName:
Full=NNP-1 homolog; AltName: Full=RRP1-like protein
gi|7298046|gb|AAF53287.1| Nnp-1 [Drosophila melanogaster]
gi|51092173|gb|AAT94500.1| LD23193p [Drosophila melanogaster]
Length = 687
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 76 FNEDDFMRIWKGLYYTMWMSDKPLVQE 102
>gi|85014271|ref|XP_955631.1| DNA polymerase delta regulatory subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171325|emb|CAD27050.1| DNA POLYMERASE DELTA SMALL SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 424
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN-ETDTEECVIIGTL 83
L+S +Y QF Y RL ++R ++ R ++ G + + + D+ E CVI+GTL
Sbjct: 3 LSSVNYEHQFNRTYDARLMELRPYII-RSAKASGTTPVLDAILDIEMGRGGERCVIVGTL 61
Query: 84 FKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED-----ELQRIPLHGNIDIHN 138
F LKP I I + K + + + + S + LED EL+ + + H
Sbjct: 62 FIASDLKPTIFDRIDRKSKKIKEIEAKTYHSQEVKYFLEDGSGKIELEFLDMKAVYRKHF 121
Query: 139 QV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
+ TG+ + + G G+F DV + P PR
Sbjct: 122 VISTGMCIGVTGRMAEKGRFLAEDVLF--PFSSPR 154
>gi|195351275|ref|XP_002042160.1| GM25620 [Drosophila sechellia]
gi|194123984|gb|EDW46027.1| GM25620 [Drosophila sechellia]
Length = 665
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 76 FNEDDFMRIWKGLYYTMWMSDKPLVQE 102
>gi|194860697|ref|XP_001969637.1| GG10208 [Drosophila erecta]
gi|190661504|gb|EDV58696.1| GG10208 [Drosophila erecta]
Length = 698
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 76 FNEDDFMRIWKGLYYTMWMSDKPLVQE 102
>gi|323336923|gb|EGA78180.1| Pol31p [Saccharomyces cerevisiae Vin13]
Length = 376
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 90 KPNILKEISEELKLVPQ--PQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTGVVVA 146
KPN+L E+ + P +T SDE++LEDE R+ L G+ I +TGVVV
Sbjct: 4 KPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDFIRSTPFITGVVVG 63
Query: 147 IKGTPVGNGKFKVSDVCYATPV 168
I G G F+V D+CY TP+
Sbjct: 64 ILGMEAEAGTFQVLDICYPTPL 85
>gi|195472589|ref|XP_002088582.1| GE11688 [Drosophila yakuba]
gi|194174683|gb|EDW88294.1| GE11688 [Drosophila yakuba]
Length = 697
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 76 FNEDDFMRIWKGLYYTMWMSDKPLVQE 102
>gi|357620365|gb|EHJ72582.1| hypothetical protein KGM_10998 [Danaus plexippus]
Length = 663
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 25/26 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
F +DDFIR+W+GLF+++WMSDKPL+Q
Sbjct: 69 FKEDDFIRVWKGLFYAVWMSDKPLVQ 94
>gi|194765807|ref|XP_001965017.1| GF21670 [Drosophila ananassae]
gi|190617627|gb|EDV33151.1| GF21670 [Drosophila ananassae]
Length = 670
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 27/27 (100%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT++DF+R+W+GL+++MWMSDKPL+Q+
Sbjct: 78 FTEEDFMRIWKGLYYNMWMSDKPLVQE 104
>gi|195398135|ref|XP_002057680.1| GJ18264 [Drosophila virilis]
gi|194141334|gb|EDW57753.1| GJ18264 [Drosophila virilis]
Length = 680
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 27/27 (100%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+DDF+R+W+GL++++WMSDKPL+Q+
Sbjct: 79 FTEDDFMRIWKGLYYNVWMSDKPLVQE 105
>gi|347968354|ref|XP_312240.5| AGAP002684-PA [Anopheles gambiae str. PEST]
gi|347968356|ref|XP_003436209.1| AGAP002684-PB [Anopheles gambiae str. PEST]
gi|333468043|gb|EAA08118.5| AGAP002684-PA [Anopheles gambiae str. PEST]
gi|333468044|gb|EGK96804.1| AGAP002684-PB [Anopheles gambiae str. PEST]
Length = 752
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+D DF+RLW+GLF+ MWMSDKPL+Q+
Sbjct: 71 FSDLDFMRLWKGLFYCMWMSDKPLVQE 97
>gi|449330175|gb|AGE96437.1| DNA polymerase delta small subunit [Encephalitozoon cuniculi]
Length = 424
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN-ETDTEECVIIGTL 83
L+S +Y QF Y RL ++R ++ R ++ G + + + D+ E CVI+GTL
Sbjct: 3 LSSVNYEHQFNRTYDARLMELRPYII-RSAKASGTTPVLDAILDIEMGRGGERCVIVGTL 61
Query: 84 FKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILED-----ELQRIPLHGNIDIHN 138
F LKP I I + K + + + + + + LED EL+ + + H
Sbjct: 62 FIASDLKPTIFDRIDRKSKKIKEIEAKTYHTQEVKYFLEDGSGKIELEFLDMKAVYRKHF 121
Query: 139 QV-TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
+ TG+ + + G G+F DV + P PR
Sbjct: 122 VISTGMCIGVTGRMAEKGRFLAEDVLF--PFSSPR 154
>gi|325181440|emb|CCA15856.1| DNA polymerase alpha/epsilon subunit B putative [Albugo laibachii
Nc14]
Length = 477
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
R DY L Q F K Y++Q++H+Y RL+ +R+ L +S + K+ DL
Sbjct: 6 RQRVDYTPLYQRFVYKKKSYTQQYSHLYVNRLHVLRKRLSQTISADRNDVPLLPKIIDLQ 65
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKE-ISEELKLVPQPQHTHFVSD--SDELILEDELQR 127
C+I GT+ K + KP + + IS E + SD D++ILED+ R
Sbjct: 66 A--GVRCIITGTVLKVLKNKPRLFEALISSEQSIDSLLNIGKLASDQGEDQIILEDDSGR 123
Query: 128 IPLHGNIDIHNQVTGVVVAIKGTPVGN--GKFKVSDVCYATPVFKPRTTL-SNNENKYVN 184
+ L G++ + + VV +G F+V V Y P KP+ L +++YV
Sbjct: 124 VELSGDMFDPDVLVTGVVVAVQGQLGEEVSGFQVQKVFY--PYMKPQKPLVRTTKSQYVA 181
Query: 185 HVDAFT 190
V +
Sbjct: 182 LVSGLS 187
>gi|154321061|ref|XP_001559846.1| hypothetical protein BC1G_01405 [Botryotinia fuckeliana B05.10]
Length = 447
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 36/200 (18%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKW-GKSVSVLKLSD 68
TR + YK LS SK Y +Q+ +Y +RL +++ + S W G +S
Sbjct: 23 TRVPSSYKPLSTFALSKSKQYQQQYGDMYFLRLTSLKKPVEEIASAAWDGFQISG----- 77
Query: 69 LNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDS-DELILEDELQR 127
+E+ + P P+ + D DE++LEDE R
Sbjct: 78 --------------------------EEVRKHWISAPPPRRKYLSGDGEDEIMLEDESGR 111
Query: 128 IPL-HGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYAT-PVFKPRTTLSNNENKYVNH 185
+ L G + VTG +VA+ GT NG F+V D+ P +PR +S + +
Sbjct: 112 LRLIGGQLSKELLVTGCIVAVMGTENANGDFEVVDIKVPDLPPQEPRWEISGEKEEEDTD 171
Query: 186 VDAF-TDDDFIRLWEGLFFS 204
+D I L GL FS
Sbjct: 172 MDTGKAGRKKIALVSGLSFS 191
>gi|340715453|ref|XP_003396227.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA processing protein 1
homolog [Bombus terrestris]
Length = 695
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
A T DF+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 75 ALTKADFMRLWKGLFYYMWMSDKPLIQE 102
>gi|383850971|ref|XP_003701037.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Megachile
rotundata]
Length = 695
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFT +F+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 80 AFTKLNFMRLWKGLFYCMWMSDKPLIQE 107
>gi|195115156|ref|XP_002002130.1| GI14071 [Drosophila mojavensis]
gi|193912705|gb|EDW11572.1| GI14071 [Drosophila mojavensis]
Length = 353
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 27/27 (100%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+DDF+R+W+GL++++WMSDKPL+Q+
Sbjct: 80 FTEDDFMRIWKGLYYNVWMSDKPLVQE 106
>gi|429852039|gb|ELA27194.1| DNA polymerase delta subunit [Colletotrichum gloeosporioides Nara
gc5]
Length = 417
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT-HFVSDS---DELILEDELQRIPL 130
E C + GT++ LKPNIL+++S++ + + P T + SD ++++LED+ RI L
Sbjct: 7 ELCWVTGTVYMDMPLKPNILEDVSKD-RWISAPISTDRYYSDDVEKNQIMLEDDSGRIRL 65
Query: 131 HGNI--DIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164
G++ IH VTG ++ + GT +G+ +V DV +
Sbjct: 66 VGDVLKSIH-LVTGCIIGVMGTENASGELEVIDVKF 100
>gi|350414496|ref|XP_003490336.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Bombus
impatiens]
Length = 696
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ T DF+RLW+GLF+ MWMSDKPLIQ+
Sbjct: 76 SLTKADFMRLWKGLFYYMWMSDKPLIQE 103
>gi|195049854|ref|XP_001992775.1| GH13456 [Drosophila grimshawi]
gi|193899834|gb|EDV98700.1| GH13456 [Drosophila grimshawi]
Length = 694
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 26/27 (96%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DDF+R+W+GL++++WMSDKPL+Q+
Sbjct: 79 FNEDDFMRIWKGLYYNVWMSDKPLVQE 105
>gi|47209346|emb|CAF93321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 792
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 170 KP-RTTLSNNENKYVNHV------DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
KP RT KY+ HV D FT D+ ++LW+GLF+ +WM DKPL+Q+
Sbjct: 20 KPVRTKAIKKLRKYI-HVRSQKAADGFTPDELLKLWKGLFYCLWMQDKPLLQE 71
>gi|260830286|ref|XP_002610092.1| hypothetical protein BRAFLDRAFT_125655 [Branchiostoma floridae]
gi|229295455|gb|EEN66102.1| hypothetical protein BRAFLDRAFT_125655 [Branchiostoma floridae]
Length = 771
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F +DD +++W+GLF+ MWMSDKPL+Q+
Sbjct: 51 GFEEDDMLKIWKGLFYCMWMSDKPLVQE 78
>gi|346468695|gb|AEO34192.1| hypothetical protein [Amblyomma maculatum]
Length = 556
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT++ ++LW+GLFF MWMSDKPLIQ+
Sbjct: 43 FTEESLMKLWKGLFFCMWMSDKPLIQQ 69
>gi|147907118|ref|NP_001079495.1| uncharacterized protein LOC379182 [Xenopus laevis]
gi|83318346|gb|AAI08790.1| MGC53677 protein [Xenopus laevis]
Length = 611
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 185 HVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+++FI++W+GLF+ MWM DKPL+Q+
Sbjct: 40 ETGGFTEEEFIKIWKGLFYCMWMQDKPLLQE 70
>gi|62860280|ref|NP_001015923.1| ribosomal RNA processing 1 homolog B [Xenopus (Silurana)
tropicalis]
gi|89268123|emb|CAJ83555.1| Novel nuclear protein 1 [Xenopus (Silurana) tropicalis]
Length = 612
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+++FI++W+GLF+ MWM DKPL+Q+
Sbjct: 43 GFTEEEFIKIWKGLFYCMWMQDKPLLQE 70
>gi|60552498|gb|AAH91594.1| rrp1b protein [Xenopus (Silurana) tropicalis]
Length = 612
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+++FI++W+GLF+ MWM DKPL+Q+
Sbjct: 43 GFTEEEFIKIWKGLFYCMWMQDKPLLQE 70
>gi|70914220|ref|XP_731769.1| DNA polymerase delta small subunit [Plasmodium chabaudi chabaudi]
gi|56501978|emb|CAH87757.1| DNA polymerase delta small subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 104
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 111 HFVSDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA-TPVF 169
++ D D L EDE R+ L GNI+ + VTG+ V IKG + NG V ++ YA P
Sbjct: 6 NYSQDQDVLFFEDETARLKLEGNINSDHYVTGLTVIIKGVGMSNGSIYVDELIYAYLPKI 65
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFS 204
+ +SN DD +I GLF +
Sbjct: 66 EIPKCISN-------------DDKYILFVSGLFIN 87
>gi|403271405|ref|XP_003927615.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA processing protein 1
homolog A [Saimiri boliviensis boliviensis]
Length = 451
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
D FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 ADGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|390478252|ref|XP_002761510.2| PREDICTED: ribosomal RNA processing protein 1 homolog A [Callithrix
jacchus]
Length = 482
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
D FT D+ +++W+GLF+ MWM DKPL+Q
Sbjct: 44 ADGFTHDELLKVWKGLFYCMWMQDKPLLQ 72
>gi|396082121|gb|AFN83733.1| DNA polymerase delta regulatory subunit B [Encephalitozoon romaleae
SJ-2008]
Length = 425
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSV--SVLKLSDLNETDTEECVIIGT 82
L+ +Y QF Y RL ++R ++ + S+L + + E CVIIGT
Sbjct: 4 LSLVNYEHQFNRTYDARLAELRPYIIKSAKALNAGPILDSILGIEE--EPGNRRCVIIGT 61
Query: 83 LFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDI-----H 137
LF LKP I +I+ + K + + + + S + LED R+ + +DI
Sbjct: 62 LFIASDLKPTIFDKINRKSKKIKEMEAKTYYSQEIKYFLEDGSGRVEVE-FLDISWIYQR 120
Query: 138 NQV--TGVVVAIKGTPVGNGKFKVSDVCY 164
N V TG+ + + G KF D+ +
Sbjct: 121 NFVISTGMCIGVAGAMTERTKFLAEDILF 149
>gi|358401336|gb|EHK50642.1| hypothetical protein TRIATDRAFT_297022 [Trichoderma atroviride IMI
206040]
Length = 404
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 88 QLKPNILKEISEELKLVPQPQHTHFVSD--SDELILEDELQRIPLHGNIDIHN--QVTGV 143
+LKPNIL+++S++ L + SD SD+++LED+ R+ L G++ ++N VTG
Sbjct: 4 RLKPNILEDVSKDRWLSAPISSQKYYSDDGSDQIMLEDDSGRVRLVGDV-LNNIPLVTGC 62
Query: 144 VVAIKGTPVGNGKFKVSDV 162
++A+ GT NG+F+V D+
Sbjct: 63 IIAVMGTENTNGEFEVIDL 81
>gi|27882022|gb|AAH43851.1| MGC53677 protein [Xenopus laevis]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 25/28 (89%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+++FI++W+GLF+ MWM DKPL+Q+
Sbjct: 43 GFTEEEFIKIWKGLFYCMWMQDKPLLQE 70
>gi|167394646|ref|XP_001733543.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894547|gb|EDR22515.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 232
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
RP + F + +Y +Q+ IY RL ++R L V + V KLS +
Sbjct: 3 RPEVNIVIEKTSFLMEKMEYIEQYGTIYFDRLKRLRPLLEISVKKVDSNICIVEKLSHIP 62
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH--FVSDSDELILEDELQRI 128
+ +IGTLFK + P +L + + +K V +V DSD LED +
Sbjct: 63 QG---RVALIGTLFKKSKKIPTLLNQ-YKSIKSVDSISFNEDSYVDDSDTCYLEDITSHV 118
Query: 129 PLHGNID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
L N D + + V+G +A+ G + + F++ + Y P KP+ T
Sbjct: 119 NLIINKDQLAHIVSGTALAVIGELINDLSFEIKSILY--PYDKPKPT 163
>gi|407043539|gb|EKE42004.1| DNA polymerase epsilon subunit B domain containing protein
[Entamoeba nuttalli P19]
Length = 395
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
RP D F + +Y++Q+ IY RL ++R L V + V KLS +
Sbjct: 3 RPEVDIVIEKTSFLMEKMEYTEQYGTIYFDRLKRLRPLLEISVKKVDSNICIVEKLSHIP 62
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ--HTHFVSDSDELILEDELQRI 128
+ +IGTLFK + P +L + + +K V +V DSD LED +
Sbjct: 63 QG---RVALIGTLFKKSKKIPTLLNQY-KSIKSVDSINFDEDSYVDDSDTCYLEDITSHV 118
Query: 129 PLHGNID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
L + D + + V+G +A+ G + F++ + Y P KP+ T
Sbjct: 119 NLIIDKDQLAHIVSGTALAVIGELSNDSSFEIKSILY--PYDKPKPT 163
>gi|307187122|gb|EFN72366.1| Ribosomal RNA processing protein 1-like protein [Camponotus
floridanus]
Length = 780
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
AFT DF+ LW+GLF+ MWMSDK LIQ
Sbjct: 54 AFTKTDFMSLWKGLFYCMWMSDKMLIQ 80
>gi|198421555|ref|XP_002128128.1| PREDICTED: similar to Ribosomal RNA processing protein 1 homolog B
(RRP1-like protein B) [Ciona intestinalis]
Length = 736
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ V F ++ I++W+GLF+ MWMSDKPLIQ+
Sbjct: 49 RSVKQEGGFVRNEMIKMWKGLFYCMWMSDKPLIQE 83
>gi|183230790|ref|XP_001913482.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802748|gb|EDS89734.1| hypothetical protein EHI_141410 [Entamoeba histolytica HM-1:IMSS]
gi|449704541|gb|EMD44767.1| DNA polymerase delta small subunit, putative [Entamoeba histolytica
KU27]
Length = 395
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
RP D F + +Y++Q+ IY RL ++R L V + V KLS +
Sbjct: 3 RPEVDIVIEKTSFLMEKMEYTEQYGTIYFDRLKRLRPLLEISVKKVDSNICIVEKLSHIP 62
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQ--HTHFVSDSDELILEDELQRI 128
+ +IGTLFK + P +L + + +K V +V DSD LED +
Sbjct: 63 QG---RVALIGTLFKKSKKIPTLLNQY-KSIKSVDSISFDEDSYVDDSDTCYLEDITSHV 118
Query: 129 PLHGNID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
L + D + + V+G +A+ G + F++ + Y P KP+ T
Sbjct: 119 NLIIDKDQLAHIVSGTALAVIGELSNDSSFEIKSILY--PYDKPKPT 163
>gi|427780047|gb|JAA55475.1| Putative nucleolar protein [Rhipicephalus pulchellus]
Length = 882
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT++ ++LW+GLFF MWMSDKP +Q+
Sbjct: 43 FTEESLMKLWKGLFFCMWMSDKPFVQQ 69
>gi|427781545|gb|JAA56224.1| Putative nucleolar protein [Rhipicephalus pulchellus]
Length = 843
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT++ ++LW+GLFF MWMSDKP +Q+
Sbjct: 43 FTEESLMKLWKGLFFCMWMSDKPFVQQ 69
>gi|167393588|ref|XP_001740638.1| DNA polymerase delta small subunit [Entamoeba dispar SAW760]
gi|165895179|gb|EDR22929.1| DNA polymerase delta small subunit, putative [Entamoeba dispar
SAW760]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 11 RPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLN 70
RP + F + +Y +Q+ IY RL ++R L V + V KLS +
Sbjct: 3 RPEVNIVIEKTSFLMEKMEYIEQYGTIYFDRLKRLRPLLEISVKKVDSNICIVEKLSHIP 62
Query: 71 ETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTH--FVSDSDELILEDELQRI 128
+ +IGTLFK + P +L + + +K V +V DSD LED +
Sbjct: 63 QGTV---ALIGTLFKKSKKIPTLLNQ-YKSIKSVDSISFNEDSYVDDSDTCYLEDITSHV 118
Query: 129 PLHGNID-IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
L N D + + V+G +A+ G + + F++ + Y P KP+ T
Sbjct: 119 NLIINKDQLAHIVSGTALAVIGELINDLSFEIKSILY--PYDKPKPT 163
>gi|444513455|gb|ELV10334.1| Ribosomal RNA processing protein 1 like protein A [Tupaia
chinensis]
Length = 414
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQKY 216
FT D+ +++W+GLF+ MWM DKPL+Q +
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLVQTF 74
>gi|307206111|gb|EFN84191.1| Ribosomal RNA processing protein 1-like protein [Harpegnathos
saltator]
Length = 398
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
AFT+ DF+ LW+GLF+ MWMSDK LIQ+
Sbjct: 60 AFTEMDFMSLWKGLFYCMWMSDKMLIQE 87
>gi|429962362|gb|ELA41906.1| hypothetical protein VICG_01090 [Vittaforma corneae ATCC 50505]
Length = 392
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLF 84
+ D+S+Q+ Y R N+MRE +++ S S L L L + EEC++I L
Sbjct: 1 MGQADFSRQYNISYITRYNRMRELIMSNPS----ISEYSLPLKKLGDDIFEECIVIAILV 56
Query: 85 KHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHN---QVT 141
+LK +IL+ + P +V +S +L +ED ++P+ + + T
Sbjct: 57 LDSKLKFSILQ--------MNDPNVESYVPNS-QLYIEDFSGKLPIVFSQSFNKLSLLCT 107
Query: 142 GVVVAIKGTPVGNGKFKVSDVCYATPVFKP 171
G V+ G + F +DV + PV P
Sbjct: 108 GTVLGFVGCKIETNVFVCTDVIFPKPVEVP 137
>gi|56403648|emb|CAI29622.1| hypothetical protein [Pongo abelii]
Length = 635
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|301787783|ref|XP_002929309.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Ailuropoda melanoleuca]
Length = 429
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQKY 216
FT D+ +++W+GLF+ MWM DKPL+Q +
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQTF 74
>gi|442758441|gb|JAA71379.1| Putative nucleolar protein [Ixodes ricinus]
Length = 336
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT++ ++LW+GLFF MWMSDKP +Q+
Sbjct: 43 FTEESLMKLWKGLFFCMWMSDKPFVQQ 69
>gi|401828473|ref|XP_003887950.1| DNA polymerase delta subunit B [Encephalitozoon hellem ATCC 50504]
gi|392998958|gb|AFM98969.1| DNA polymerase delta subunit B [Encephalitozoon hellem ATCC 50504]
Length = 424
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 25 LASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDL-NETDTEECVIIGTL 83
L+ +Y QF Y RL +++ ++ R ++ G + + D E + VI+GTL
Sbjct: 4 LSLVNYEHQFNRTYDARLTELKPYVM-RSARALGVGPVLDSILDAEQEPGDRKSVIVGTL 62
Query: 84 FKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLH----GNIDIHNQ 139
F LKP I +I + K + + + + S + LED RI L + N
Sbjct: 63 FIVSDLKPTIFDKIDRKSKEIKKIEAKTYYSRGMKYFLEDGSGRIELEFPDISRVYQRNF 122
Query: 140 V--TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPR 172
V TG+ + + G G+F D+ + P PR
Sbjct: 123 VISTGMCIGVSGVMAERGRFLAEDILF--PFSYPR 155
>gi|194226305|ref|XP_001916698.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA processing protein 1
homolog A-like [Equus caballus]
Length = 451
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|402862215|ref|XP_003895463.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Papio
anubis]
Length = 460
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|387542290|gb|AFJ71772.1| ribosomal RNA processing protein 1 homolog A [Macaca mulatta]
Length = 460
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|290981052|ref|XP_002673245.1| predicted protein [Naegleria gruberi]
gi|284086827|gb|EFC40501.1| predicted protein [Naegleria gruberi]
Length = 397
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Query: 67 SDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHT--HFVSDSDELILEDE 124
S L+ T E + GTL+K +LKPNIL+E + E + +FVSDSD LILED
Sbjct: 10 SMLDLTMGVEYTVAGTLYKEMKLKPNILREFTTEKNFEAEKVELLDNFVSDSDYLILED- 68
Query: 125 LQRIPLHG---NIDIHNQ------------VTGVVVAIKGTPVGNGKFKVSDVCYATP 167
L+G N+ ++ VTG++ + G +G F D+ + P
Sbjct: 69 -----LNGSRCNVVFESKNSEKNRLMTSQLVTGIIAGLYGQIDSSGTFIAKDIVFNDP 121
>gi|109065174|ref|XP_001104449.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Macaca mulatta]
Length = 460
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|207079893|ref|NP_001128907.1| ribosomal RNA processing protein 1 homolog A [Pongo abelii]
gi|55733415|emb|CAH93388.1| hypothetical protein [Pongo abelii]
Length = 461
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|440895575|gb|ELR47727.1| Ribosomal RNA processing protein 1-like protein A [Bos grunniens
mutus]
Length = 446
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|380817480|gb|AFE80614.1| ribosomal RNA processing protein 1 homolog A [Macaca mulatta]
gi|383422383|gb|AFH34405.1| ribosomal RNA processing protein 1 homolog A [Macaca mulatta]
Length = 460
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|345795470|ref|XP_535602.3| PREDICTED: ribosomal RNA processing protein 1 homolog A [Canis
lupus familiaris]
Length = 454
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|115497696|ref|NP_001069057.1| ribosomal RNA processing protein 1 homolog A [Bos taurus]
gi|109939913|gb|AAI18311.1| Ribosomal RNA processing 1 homolog (S. cerevisiae) [Bos taurus]
gi|296490829|tpg|DAA32942.1| TPA: ribosomal RNA processing 1 homolog [Bos taurus]
Length = 446
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|45945654|gb|AAH14787.2| RRP1 protein [Homo sapiens]
Length = 466
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 49 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 78
>gi|4503247|ref|NP_003674.1| ribosomal RNA processing protein 1 homolog A [Homo sapiens]
gi|2829451|sp|P56182.1|RRP1_HUMAN RecName: Full=Ribosomal RNA processing protein 1 homolog A;
AltName: Full=Novel nuclear protein 1; Short=NNP-1;
AltName: Full=Nucleolar protein Nop52; AltName:
Full=RRP1-like protein
gi|2258274|gb|AAC51625.1| NNP-1/Nop52 [Homo sapiens]
gi|7768761|dbj|BAA95542.1| NNP-1/Nop52 (NNP-1), novel nuclear protein 1 [Homo sapiens]
gi|12653223|gb|AAH00380.1| Ribosomal RNA processing 1 homolog (S. cerevisiae) [Homo sapiens]
gi|119629875|gb|EAX09470.1| DNA segment on chromosome 21 (unique) 2056 expressed sequence,
isoform CRA_a [Homo sapiens]
gi|123980976|gb|ABM82317.1| DNA segment on chromosome 21 (unique) 2056 expressed sequence
[synthetic construct]
gi|123995783|gb|ABM85493.1| DNA segment on chromosome 21 (unique) 2056 expressed sequence
[synthetic construct]
Length = 461
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|62897931|dbj|BAD96905.1| nucleolar protein NOP52 variant [Homo sapiens]
gi|62897991|dbj|BAD96935.1| nucleolar protein NOP52 variant [Homo sapiens]
Length = 461
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|410349215|gb|JAA41211.1| ribosomal RNA processing 1 homolog [Pan troglodytes]
Length = 461
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|410208636|gb|JAA01537.1| ribosomal RNA processing 1 homolog [Pan troglodytes]
gi|410296824|gb|JAA27012.1| ribosomal RNA processing 1 homolog [Pan troglodytes]
Length = 461
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|384950018|gb|AFI38614.1| ribosomal RNA processing protein 1 homolog A [Macaca mulatta]
Length = 460
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|114684585|ref|XP_001145779.1| PREDICTED: ribosomal RNA processing protein 1 homolog A isoform 4
[Pan troglodytes]
Length = 461
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|327268417|ref|XP_003218994.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Anolis carolinensis]
Length = 755
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 25/31 (80%)
Query: 184 NHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
N +F++++ +++W+GLF+ MWM DKPL+Q
Sbjct: 53 NPAGSFSEEELLKIWKGLFYCMWMQDKPLLQ 83
>gi|431893744|gb|ELK03562.1| Ribosomal RNA processing protein 1 like protein A [Pteropus alecto]
Length = 439
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|417401079|gb|JAA47438.1| Putative nucleolar protein [Desmodus rotundus]
Length = 446
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 39 KTQRAAGGFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|148231446|ref|NP_001079701.1| ribosomal RNA processing 1 homolog B [Xenopus laevis]
gi|29126824|gb|AAH47979.1| MGC53743 protein [Xenopus laevis]
Length = 613
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT ++ I++W+GLF+ MWM DKPL+Q+
Sbjct: 43 GFTQEELIKIWKGLFYCMWMQDKPLLQE 70
>gi|397506788|ref|XP_003823900.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Pan
paniscus]
Length = 461
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|332256600|ref|XP_003277405.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Nomascus
leucogenys]
Length = 461
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|355764549|gb|EHH62297.1| RRP1-like protein, partial [Macaca fascicularis]
Length = 417
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 4 GFTHDELLKVWKGLFYCMWMQDKPLLQE 31
>gi|332019424|gb|EGI59908.1| Ribosomal RNA processing protein 1-like protein [Acromyrmex
echinatior]
Length = 649
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
FT DF+ LW+GLF+ MWMSDK LIQ
Sbjct: 66 FTKTDFMSLWKGLFYCMWMSDKMLIQ 91
>gi|426219505|ref|XP_004003962.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Ovis
aries]
Length = 407
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|355560246|gb|EHH16932.1| RRP1-like protein, partial [Macaca mulatta]
Length = 418
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 2 AGGFTHDELLKVWKGLFYCMWMQDKPLLQE 31
>gi|120419458|gb|ABM21548.1| nucleolar protein NOP52 [Bos taurus]
Length = 411
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|410926503|ref|XP_003976718.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Takifugu rubripes]
Length = 555
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 170 KP-RTTLSNNENKYV-----NHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
KP RT KY+ D FT ++ ++LW+GLF+ +WM DKPL+Q+
Sbjct: 40 KPVRTKAIKKLRKYILVRSQKAADGFTPEELLKLWKGLFYCLWMQDKPLLQE 91
>gi|194381134|dbj|BAG64135.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|349803911|gb|AEQ17428.1| hypothetical protein [Hymenochirus curtipes]
Length = 186
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT+++F +LW+GLF+ MWM DKPL+Q+
Sbjct: 26 GFTEEEFSKLWKGLFYCMWMQDKPLLQE 53
>gi|281338405|gb|EFB13989.1| hypothetical protein PANDA_019460 [Ailuropoda melanoleuca]
Length = 325
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFTHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|238491652|ref|XP_002377063.1| DNA polymerase delta subunit 2, putative [Aspergillus flavus
NRRL3357]
gi|220697476|gb|EED53817.1| DNA polymerase delta subunit 2, putative [Aspergillus flavus
NRRL3357]
Length = 442
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 89 LKPNILKEISEELK-------LVPQPQHTHFVSDSDEL---ILEDELQRIPLHGNIDIHN 138
LKPNIL ++++E P P+ T+ EL +LEDE R+ L GN+
Sbjct: 5 LKPNILDDLTKEASRQCLLPYTSPPPRPTYLDPAHPELTQIMLEDESGRLRLTGNMLRSI 64
Query: 139 QV-TGVVVAIKGTPVGNGKFKVSDV 162
Q+ TG +VA+ GT NG F+V DV
Sbjct: 65 QLATGAIVAVLGTENSNGDFEVIDV 89
>gi|395518508|ref|XP_003763402.1| PREDICTED: uncharacterized protein LOC100924901 [Sarcophilus
harrisii]
Length = 660
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 27 GFSHDELLKIWKGLFYCMWMQDKPLLQE 54
>gi|242006569|ref|XP_002424122.1| nnp-1 protein, putative [Pediculus humanus corporis]
gi|212507439|gb|EEB11384.1| nnp-1 protein, putative [Pediculus humanus corporis]
Length = 759
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
F++++FIR+W GLF+ MWMSDK L+Q
Sbjct: 58 FSEEEFIRIWTGLFYCMWMSDKFLVQ 83
>gi|213407668|ref|XP_002174605.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212002652|gb|EEB08312.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 213
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K R + + ++++ FT DF++LW+GLF+ MWM+DKP Q+
Sbjct: 17 KTRDSALESLQRFLSQKKPFTKMDFLKLWKGLFYCMWMADKPRYQQ 62
>gi|209737432|gb|ACI69585.1| DNA polymerase subunit delta-2 [Salmo salar]
Length = 85
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 9 YTRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLLARVSQKWGK 59
+ R Y S+ F+L + +++Q+AHIYA RL +M L QKWGK
Sbjct: 30 FDRVKPAYSPCSERFKLGERSFNRQYAHIYATRLMQMSPLLTEGAQQKWGK 80
>gi|449482980|ref|XP_002189848.2| PREDICTED: ribosomal RNA processing protein 1 homolog B
[Taeniopygia guttata]
Length = 731
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
V F+ ++ +++W+GLF+ MWM DKPL+Q+
Sbjct: 23 VGGFSQEELLKIWKGLFYCMWMQDKPLLQE 52
>gi|2258276|gb|AAC53286.1| NNP-1 [Mus musculus]
Length = 443
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 179 ENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
E + FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 37 EARSQRATGGFTPDELLKVWKGLFYCMWMQDKPLQQE 73
>gi|355717380|gb|AES05914.1| ribosomal RNA processing 1-like protein [Mustela putorius furo]
Length = 288
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 2 GFTHDELLKVWKGLFYCMWMQDKPLLQE 29
>gi|300122139|emb|CBK22713.2| unnamed protein product [Blastocystis hominis]
Length = 122
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 16/116 (13%)
Query: 45 MRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKE-ISEELKL 103
M+ L+ +KWG ++ +++ N E+C+IIGT++K L +IL E +S
Sbjct: 1 MKPLLIDACKRKWGDTIPIVE-EIRNVKCQEDCIIIGTIYKDLSLFKSILNEKVSSAFN- 58
Query: 104 VPQPQHTHFV----------SDSDELILEDELQRIPLHGNIDIHNQVTGVVVAIKG 149
PQ T F+ + D +ILED RI + D VTGVV+AI+G
Sbjct: 59 -PQLIGTQFLPKNSLHGPLSQEGDPIILEDSTTRIMIKDFKD--PIVTGVVMAIRG 111
>gi|117676367|ref|NP_035055.2| ribosomal RNA processing protein 1 homolog A [Mus musculus]
gi|21431818|sp|P56183.2|RRP1_MOUSE RecName: Full=Ribosomal RNA processing protein 1 homolog A;
AltName: Full=Novel nuclear protein 1; Short=NNP-1;
AltName: Full=Nucleolar protein Nop52; AltName:
Full=RRP1-like protein
gi|2258278|gb|AAB63261.1| NNP-1 var [Mus musculus]
gi|11037552|gb|AAF76216.2| novel nuclear protein Nnp1 [Mus musculus]
gi|41946797|gb|AAH65993.1| Ribosomal RNA processing 1 homolog (S. cerevisiae) [Mus musculus]
gi|42406394|gb|AAH65994.1| Ribosomal RNA processing 1 homolog (S. cerevisiae) [Mus musculus]
gi|148699786|gb|EDL31733.1| novel nuclear protein 1, isoform CRA_a [Mus musculus]
Length = 494
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 179 ENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
E + FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 37 EARSQRATGGFTPDELLKVWKGLFYCMWMQDKPLQQE 73
>gi|193688269|ref|XP_001946514.1| PREDICTED: hypothetical protein LOC100166799 [Acyrthosiphon pisum]
Length = 878
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
DAF +D++ +W GLF+ MWMSDKPL Q+
Sbjct: 58 DAFQLNDYLIIWRGLFYFMWMSDKPLPQE 86
>gi|148699789|gb|EDL31736.1| novel nuclear protein 1, isoform CRA_d [Mus musculus]
Length = 331
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 179 ENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
E + FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 37 EARSQRATGGFTPDELLKVWKGLFYCMWMQDKPLQQE 73
>gi|395851241|ref|XP_003798174.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Otolemur
garnettii]
Length = 444
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ D+ +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFSHDELLKVWKGLFYCMWMQDKPLLQE 73
>gi|157870692|ref|XP_001683896.1| putative DNA polymerase delta subunit 2 [Leishmania major strain
Friedlin]
gi|68126963|emb|CAJ05268.1| putative DNA polymerase delta subunit 2 [Leishmania major strain
Friedlin]
Length = 592
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 56/205 (27%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLL------ARVSQKWGKSVSV 63
TR Q F L S ++++Q+A +Y R+ L R +G
Sbjct: 13 TRSACPITRTHQRFLLRSLEFTQQYAPMYRCRMGAQYTSALQAIQRLVRADPMYGPEAGA 72
Query: 64 LKLSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL--------------------- 101
+K + E V +G ++K+ +L P L E EL
Sbjct: 73 MKPRRVLELQPGVPAVCVGIVYKNMKLLPRFLDEYQSELVRIDAGDDDNDEESGVVEAAP 132
Query: 102 ---------------------------KLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
L +H + + +DEL+LED R+ L G +
Sbjct: 133 LDRSEEAAAAAMHRGNDAEEDVSNDGQTLAAADEHYNVCNSADELMLEDSSGRVLLQG-L 191
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKV 159
D TGVV+ + GT + NG KV
Sbjct: 192 DAERFCTGVVLGVYGTLLSNGSIKV 216
>gi|391346688|ref|XP_003747601.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Metaseiulus occidentalis]
Length = 400
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 21/21 (100%)
Query: 195 IRLWEGLFFSMWMSDKPLIQK 215
I+LW+GLF+SMWM+DKPLIQ+
Sbjct: 2 IKLWKGLFYSMWMADKPLIQE 22
>gi|354506124|ref|XP_003515116.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Cricetulus griseus]
Length = 439
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 46 GFTPDELLKIWKGLFYCMWMQDKPLQQE 73
>gi|345566839|gb|EGX49779.1| hypothetical protein AOL_s00076g663 [Arthrobotrys oligospora ATCC
24927]
Length = 248
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y++ FT D ++LW+GLF+ MW+SD+P Q+
Sbjct: 34 YLSSSRTFTQSDLLKLWKGLFYCMWLSDRPRTQQ 67
>gi|356564798|ref|XP_003550635.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Glycine max]
Length = 433
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+DDD +LW+GLF+ MW SDKPL+Q
Sbjct: 43 LSDDDAKKLWKGLFYCMWHSDKPLVQ 68
>gi|356549976|ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Glycine max]
Length = 541
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+DDD +LW+GLF+ MW SDKPL+Q
Sbjct: 43 LSDDDAKKLWKGLFYCMWHSDKPLVQ 68
>gi|71897007|ref|NP_001026505.1| ribosomal RNA processing protein 1 homolog B [Gallus gallus]
gi|60098445|emb|CAH65053.1| hypothetical protein RCJMB04_2g2 [Gallus gallus]
Length = 755
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
F+ ++ +++W+GLF+ MWM DKPL+Q
Sbjct: 46 GFSQEELLKIWKGLFYCMWMQDKPLLQ 72
>gi|313236509|emb|CBY11823.1| unnamed protein product [Oikopleura dioica]
Length = 209
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPN 92
Q+ +Y R N +R L V +K+ + + KL + + V+ G K +P
Sbjct: 50 QYHKVYKSRSNLLRSRLEEAVDEKFPE-FNTRKLYQMR--IDQRAVVYGIFIKTITNQPE 106
Query: 93 ILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI--DIHNQVTGVVVAIKGT 150
IL E E+ + + +++S+ D L EDE QRI G I +TG VVA+ G
Sbjct: 107 ILHEYDED---KSEFEGDNYLSEGDILGFEDESQRIECSGITAEKIRTILTGEVVAVYGR 163
Query: 151 PVGNGKFKVSD 161
+ +G F++ D
Sbjct: 164 VIDSGTFEIED 174
>gi|322790268|gb|EFZ15267.1| hypothetical protein SINV_11247 [Solenopsis invicta]
Length = 572
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT DF+ LW+GLF+ MWMSDK L Q+
Sbjct: 73 FTKTDFMSLWKGLFYCMWMSDKMLTQE 99
>gi|225707642|gb|ACO09667.1| KIAA0179 [Osmerus mordax]
Length = 404
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ D+ ++LW+GLF+ +WM DKPL+Q+
Sbjct: 45 GFSGDELLKLWKGLFYCLWMQDKPLLQE 72
>gi|146088898|ref|XP_001466176.1| putative DNA polymerase delta subunit 2 [Leishmania infantum JPCM5]
gi|134070278|emb|CAM68615.1| putative DNA polymerase delta subunit 2 [Leishmania infantum JPCM5]
Length = 591
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 58/238 (24%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLL------ARVSQKWGKSVSV 63
TR Q F L S ++++Q+A +Y R+ L R +G
Sbjct: 13 TRSACPITRTHQRFLLRSLEFTQQYAPMYRCRMGAQYTSALHAIQRIVREDPMYGPEAGA 72
Query: 64 LKLSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL--------------------- 101
+K + E V +G ++K+ +L P L E EL
Sbjct: 73 MKPRRVLELQPGMPAVCVGIVYKNMKLLPRFLDEYQSELVRIDAGDDNDEESGVVEAAPP 132
Query: 102 --------------------------KLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
L +H + +DEL+LED R+ L G +D
Sbjct: 133 ERSEDAAAAAMRLGNEAEEDASNDGQTLAAADEHYSVCNSADELMLEDSSGRVLLQG-LD 191
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV---FKPRTTLSNNENKYVNHVDAFT 190
TGVV+ + GT + NG KV ++ + F PR + Y+ V +
Sbjct: 192 AERFCTGVVLGVYGTLLPNGSIKVLRYAFSGDLRFTFVPRPLIRAASPCYIAFVSGLS 249
>gi|326913383|ref|XP_003203018.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Meleagris gallopavo]
Length = 754
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
F+ ++ +++W+GLF+ MWM DKPL+Q
Sbjct: 46 GFSQEELLKIWKGLFYCMWMQDKPLLQ 72
>gi|398016574|ref|XP_003861475.1| DNA polymerase delta subunit 2, putative [Leishmania donovani]
gi|322499701|emb|CBZ34775.1| DNA polymerase delta subunit 2, putative [Leishmania donovani]
Length = 590
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 58/238 (24%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLL------ARVSQKWGKSVSV 63
TR Q F L S ++++Q+A +Y R+ L R +G
Sbjct: 13 TRSACPITRTHQRFLLRSLEFTQQYAPMYRCRMGAQYTSALHAIQRIVREDPMYGPEAGA 72
Query: 64 LKLSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL--------------------- 101
+K + E V +G ++K+ +L P L E EL
Sbjct: 73 MKPRRVLELQPGMPAVCVGIVYKNMKLLPRFLDEYQSELVRIDAGDDNDEESGVVEAAPP 132
Query: 102 --------------------------KLVPQPQHTHFVSDSDELILEDELQRIPLHGNID 135
L +H + +DEL+LED R+ L G +D
Sbjct: 133 ERSEDAAAAAMRLGNEAEEDASNDGQTLAAADEHYSVCNSADELMLEDSSGRVLLQG-LD 191
Query: 136 IHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV---FKPRTTLSNNENKYVNHVDAFT 190
TGVV+ + GT + NG KV ++ + F PR + Y+ V +
Sbjct: 192 AERFCTGVVLGVYGTLLPNGSIKVLRYAFSGDLRFTFVPRPLIRAASPCYIAFVSGLS 249
>gi|296421699|ref|XP_002840402.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636617|emb|CAZ84593.1| unnamed protein product [Tuber melanosporum]
Length = 430
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 75 EECVIIGTLFKHQQLKPNILKEISEELKL-VPQPQHTHFVSDSDELILEDELQRIPLHG 132
E C I+GT++ LKPNIL++I+++ + P P+ + +D+ +LEDE R+ L G
Sbjct: 44 ELCWIVGTIYMEMPLKPNILEDITKDQWIAAPPPRDKYVTPGADQTMLEDESGRLRLVG 102
>gi|156398337|ref|XP_001638145.1| predicted protein [Nematostella vectensis]
gi|156225263|gb|EDO46082.1| predicted protein [Nematostella vectensis]
Length = 638
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F + D +++W+GLF+ WMSDKPL+Q+
Sbjct: 42 GFKERDLLKIWKGLFYCFWMSDKPLVQE 69
>gi|148699787|gb|EDL31734.1| novel nuclear protein 1, isoform CRA_b [Mus musculus]
Length = 386
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 179 ENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
E + FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 37 EARSQRATGGFTPDELLKVWKGLFYCMWMQDKPLQQE 73
>gi|195996475|ref|XP_002108106.1| hypothetical protein TRIADDRAFT_52238 [Trichoplax adhaerens]
gi|190588882|gb|EDV28904.1| hypothetical protein TRIADDRAFT_52238 [Trichoplax adhaerens]
Length = 454
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
F + + ++LW GLF+ MWMSDKPLIQ
Sbjct: 41 FDEIEILKLWRGLFYCMWMSDKPLIQ 66
>gi|344253049|gb|EGW09153.1| Ribosomal RNA processing protein 1-like A [Cricetulus griseus]
Length = 382
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DKPL Q+
Sbjct: 46 GFTPDELLKIWKGLFYCMWMQDKPLQQE 73
>gi|19112541|ref|NP_595749.1| nucleolar protein Nop52 family (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626308|sp|Q9Y7M6.1|RRP1_SCHPO RecName: Full=Ribosomal RNA-processing protein 1 homolog
gi|4760345|emb|CAB42368.1| nucleolar protein Nop52 family (predicted) [Schizosaccharomyces
pombe]
Length = 217
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
++++ F DF++LW+GLF+ MWM+DKPL Q+
Sbjct: 28 RFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQ 62
>gi|385304640|gb|EIF48649.1| dna polymerase delta subunit [Dekkera bruxellensis AWRI1499]
Length = 170
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 79 IIGTLFKHQQLKPNILKEISEELKLVPQPQ-------------HTHFVSDSDELILEDEL 125
+IGT+F + KPNIL+E++ + P+ + H++ +D+++LED+
Sbjct: 35 VIGTVFMDMKYKPNILQEVTGNIYAAPEFKEDSEYDELERTRIHSYSDPATDQVMLEDDS 94
Query: 126 QRIPLHGN-IDIHNQVTGVVVAIKGTPVG 153
R+ L G +D +TGVVV G G
Sbjct: 95 GRLLLDGELLDKVVLMTGVVVGALGDDCG 123
>gi|354499112|ref|XP_003511655.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Cricetulus griseus]
Length = 836
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 29/75 (38%)
Query: 141 TGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLWEG 200
+G VVA G V DVCYA F+ ++ +++W+G
Sbjct: 118 SGSVVA--------GPVAVEDVCYAR---------------------GFSQEELLKIWKG 148
Query: 201 LFFSMWMSDKPLIQK 215
LF+ MW+ D+PL+Q+
Sbjct: 149 LFYCMWVQDEPLLQE 163
>gi|449268667|gb|EMC79516.1| Ribosomal RNA processing protein 1 like protein B, partial [Columba
livia]
Length = 724
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MWM DKPL+Q+
Sbjct: 2 GFSQEELLKIWKGLFYCMWMQDKPLLQE 29
>gi|426393230|ref|XP_004062933.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Gorilla
gorilla gorilla]
Length = 461
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT + +++W+GLF+ MWM DKPL+Q+
Sbjct: 44 AGGFTHGELLKVWKGLFYCMWMQDKPLLQE 73
>gi|313222642|emb|CBY41664.1| unnamed protein product [Oikopleura dioica]
Length = 233
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 33 QFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKHQQLKPN 92
Q+ +Y R N +R L V +K+ + + KL + + V+ G K +P
Sbjct: 50 QYHKVYKSRSNLLRSRLEEAVDEKFPE-FNTRKLYQMR--IDQRAVVYGIFIKTITNQPE 106
Query: 93 ILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNI--DIHNQVTGVVVAIKGT 150
IL E E+ + + +++S+ D L EDE QRI G I +TG VVA+ G
Sbjct: 107 ILHEYDED---KSEFEGDNYLSEGDILGFEDESQRIECSGITAEKIRTILTGEVVAVYGR 163
Query: 151 PVGNGKFKVSD 161
+ +G F++ D
Sbjct: 164 VIDSGTFEIED 174
>gi|334329439|ref|XP_001375894.2| PREDICTED: hypothetical protein LOC100024709 [Monodelphis
domestica]
Length = 919
Score = 43.5 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F ++ +++W+GLF+ MWM DKPL+Q+
Sbjct: 46 GFNHEELLKIWKGLFYCMWMQDKPLLQE 73
>gi|291231382|ref|XP_002735643.1| PREDICTED: KIAA0179-like [Saccoglossus kowalevskii]
Length = 304
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 24/27 (88%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F++DD +++W+GLF+ +WMSDK LIQ+
Sbjct: 48 FSEDDLMKIWKGLFYCVWMSDKLLIQQ 74
>gi|321260993|ref|XP_003195216.1| rRNA processing-related protein [Cryptococcus gattii WM276]
gi|317461689|gb|ADV23429.1| rRNA processing-related protein, putative [Cryptococcus gattii
WM276]
Length = 353
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 175 LSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + + YVN D + +LW+GLF+ WMSDKPLIQ+
Sbjct: 56 IEGSSSTYVN----LEDKEMAKLWKGLFYCFWMSDKPLIQQ 92
>gi|387018130|gb|AFJ51183.1| Ribosomal RNA processing protein 1 homolog B-like [Crotalus
adamanteus]
Length = 761
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MWM DKPL+Q+
Sbjct: 69 FSQEELLKIWKGLFYCMWMQDKPLLQE 95
>gi|50550223|ref|XP_502584.1| YALI0D08668p [Yarrowia lipolytica]
gi|49648452|emb|CAG80772.1| YALI0D08668p [Yarrowia lipolytica CLIB122]
Length = 292
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 177 NNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
N+ +++ AF + + ++LW+GLFFSMW SD+P Q+
Sbjct: 59 NSLKRFLGTPKAFGELELLKLWKGLFFSMWFSDRPRTQQ 97
>gi|410969933|ref|XP_003991446.1| PREDICTED: ribosomal RNA processing protein 1 homolog A [Felis
catus]
Length = 443
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K FT D+ +++W+GLF+ MWM DK L+Q+
Sbjct: 38 KTQRETGGFTHDELLKVWKGLFYCMWMQDKALLQE 72
>gi|296421493|ref|XP_002840299.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636514|emb|CAZ84490.1| unnamed protein product [Tuber melanosporum]
Length = 258
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y++ +FT +F++LW+GLF+ MW+SD+P Q+
Sbjct: 33 YLSSRRSFTKIEFLKLWKGLFYCMWLSDRPRTQQ 66
>gi|300701918|ref|XP_002995059.1| hypothetical protein NCER_102193 [Nosema ceranae BRL01]
gi|239603743|gb|EEQ81388.1| hypothetical protein NCER_102193 [Nosema ceranae BRL01]
Length = 351
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 29 DYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVL-KLSDLNETDTEECVIIGTLFKHQ 87
+++ Q+ + Y +RL +R L+++ +S+ + ++ DLN+ TE+C IIG LF
Sbjct: 7 NFTNQYNNTYKIRLVTLRP-LISK-----PQSIDICNRIHDLNK-QTEKCFIIGILFISS 59
Query: 88 QLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQV-TGVVVA 146
LK I +++ K V + T ++S + +EDE RI + N + + TG+ +
Sbjct: 60 DLKTTIFDKLNTNKKKVEFKKST-YISKDIKYFVEDETGRIEIMLNSKQKDFLCTGMCLG 118
Query: 147 IKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKYVN 184
G + N F V ++ + K T LS + +V+
Sbjct: 119 FIGN-LKNNIFNVEEIVFPNAPEKKETVLSTKKVIFVS 155
>gi|58865712|ref|NP_001012073.1| ribosomal RNA processing protein 1 homolog A [Rattus norvegicus]
gi|56541176|gb|AAH87152.1| Ribosomal RNA processing 1 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 443
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT ++ +++W+GLF+ MWM DKPL Q+
Sbjct: 46 GFTPEELLKVWKGLFYCMWMQDKPLQQE 73
>gi|348511543|ref|XP_003443303.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Oreochromis niloticus]
Length = 852
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 179 ENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
E + + F+ ++ ++LW+GLF+ +WM DKPL+Q+
Sbjct: 23 EKRKTSKEGEFSGEELLKLWKGLFYCLWMQDKPLLQE 59
>gi|432964569|ref|XP_004086961.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Oryzias latipes]
Length = 830
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ ++LW+GLF+ +WM DKPL+Q+
Sbjct: 43 GFSAEELLKLWKGLFYCLWMQDKPLLQE 70
>gi|401423419|ref|XP_003876196.1| putative DNA polymerase delta subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492437|emb|CBZ27711.1| putative DNA polymerase delta subunit 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 592
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 59/238 (24%)
Query: 10 TRPTADYKNLSQCFRLASKDYSKQFAHIYAVRLNKMRECLL------ARVSQKWGKSVSV 63
TR Q F L S ++++Q+A +Y R+ L R +G V
Sbjct: 13 TRSACPIVRTHQRFLLCSLEFTQQYAPMYRCRMGAQYASALHAIQRIVREDPMYGPEAGV 72
Query: 64 LKLSDLNETDTE-ECVIIGTLFKHQQLKPNILKEISEEL--------------------- 101
+K + E V +G ++K+ +L P L E EL
Sbjct: 73 MKPWRVLELQPGVPAVCVGIVYKNMKLLPRFLDEYQSELVRIDAGDDDNDEVSGVVETAP 132
Query: 102 ---------------------------KLVPQPQHTHFVSDSDELILEDELQRIPLHGNI 134
L +H + +DEL+LED R+ L G +
Sbjct: 133 LDRSGDAAAAVMHRGNEAEEDVSNDGQTLAATDEHYSVCNSADELMLEDSSGRVLLQG-L 191
Query: 135 DIHNQVTGVVVAIKGTPVGNGKFKVSDVCYATPV---FKPRTTLSNNENKYVNHVDAF 189
D TG+V+ + GT + NG KV ++ + F PR + Y+ V
Sbjct: 192 DAERFCTGIVLGVYGTLLPNGCIKVLRYAFSGDLGFTFVPRPLIRTASPCYIAFVSGL 249
>gi|134113941|ref|XP_774218.1| hypothetical protein CNBG2000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256853|gb|EAL19571.1| hypothetical protein CNBG2000 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 352
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 177 NNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + YVN D + +LW+GLF+ WMSDKPL+Q+
Sbjct: 58 GSSSSYVN----LEDKEMAKLWKGLFYCFWMSDKPLVQQ 92
>gi|405121753|gb|AFR96521.1| RRP1B protein [Cryptococcus neoformans var. grubii H99]
Length = 353
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 177 NNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + YVN D + +LW+GLF+ WMSDKPL+Q+
Sbjct: 58 GSSSSYVN----LEDKEMAKLWKGLFYCFWMSDKPLVQQ 92
>gi|58269568|ref|XP_571940.1| rRNA processing-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228176|gb|AAW44633.1| rRNA processing-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 352
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 177 NNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + YVN D + +LW+GLF+ WMSDKPL+Q+
Sbjct: 58 GSSSSYVN----LEDKEMAKLWKGLFYCFWMSDKPLVQQ 92
>gi|307206110|gb|EFN84190.1| Ribosomal RNA processing protein 1-like protein [Harpegnathos
saltator]
Length = 517
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQK 215
DF+ LW+GLF+ MWMSDK LIQ+
Sbjct: 2 DFMSLWKGLFYCMWMSDKMLIQE 24
>gi|345323479|ref|XP_001511992.2| PREDICTED: ribosomal RNA processing protein 1 homolog B
[Ornithorhynchus anatinus]
Length = 757
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MWM D+PL+Q+
Sbjct: 47 GFSQEELLKIWKGLFYCMWMQDQPLLQE 74
>gi|397507142|ref|XP_003824067.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Pan
paniscus]
Length = 863
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 180 NKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
NK F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 142 NKARRQTGGFSQEELLKIWKGLFYCMWVQDEPLLQE 177
>gi|348556277|ref|XP_003463949.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like [Cavia
porcellus]
Length = 448
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT D+ +++W+GLF+ MWM DK L+Q+
Sbjct: 46 GFTHDELLKIWKGLFYCMWMQDKLLLQE 73
>gi|119629885|gb|EAX09480.1| KIAA0179, isoform CRA_a [Homo sapiens]
Length = 678
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|410263338|gb|JAA19635.1| ribosomal RNA processing 1 homolog B [Pan troglodytes]
gi|410354179|gb|JAA43693.1| ribosomal RNA processing 1 homolog B [Pan troglodytes]
Length = 758
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|114684561|ref|XP_001144331.1| PREDICTED: ribosomal RNA processing protein 1 homolog B isoform 3
[Pan troglodytes]
gi|410208382|gb|JAA01410.1| ribosomal RNA processing 1 homolog B [Pan troglodytes]
gi|410287642|gb|JAA22421.1| ribosomal RNA processing 1 homolog B [Pan troglodytes]
Length = 758
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|426393222|ref|XP_004062929.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Gorilla
gorilla gorilla]
Length = 758
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|57863269|ref|NP_055871.1| ribosomal RNA processing protein 1 homolog B [Homo sapiens]
gi|296452976|sp|Q14684.3|RRP1B_HUMAN RecName: Full=Ribosomal RNA processing protein 1 homolog B;
AltName: Full=RRP1-like protein B
gi|119629888|gb|EAX09483.1| KIAA0179, isoform CRA_d [Homo sapiens]
Length = 758
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|20306289|gb|AAH28386.1| Ribosomal RNA processing 1 homolog B (S. cerevisiae) [Homo sapiens]
Length = 758
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|441672661|ref|XP_003277404.2| PREDICTED: ribosomal RNA processing protein 1 homolog B [Nomascus
leucogenys]
Length = 758
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|338720815|ref|XP_001916545.2| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA processing protein 1
homolog B-like [Equus caballus]
Length = 758
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|449304718|gb|EMD00725.1| hypothetical protein BAUCODRAFT_118466 [Baudoinia compniacensis
UAMH 10762]
Length = 262
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 172 RTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
RT LS + + FT D ++LW+GLF+ +WM DKPL Q+
Sbjct: 28 RTYLSASRPTF------FTQLDLLKLWKGLFYCLWMQDKPLHQQ 65
>gi|328770408|gb|EGF80450.1| hypothetical protein BATDEDRAFT_25039 [Batrachochytrium
dendrobatidis JAM81]
Length = 554
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + + +D D ++LW+GL+ WMSDKPL+Q+
Sbjct: 45 IANASSLSDLDMLKLWKGLYCCFWMSDKPLVQQ 77
>gi|392570785|gb|EIW63957.1| Nop52-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 323
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
DA + +LW+G+F+ WMSDKPL+Q+
Sbjct: 42 DALPKAEMTKLWKGIFYCFWMSDKPLVQQ 70
>gi|297287440|ref|XP_001104749.2| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Macaca mulatta]
Length = 725
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|348556323|ref|XP_003463972.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like [Cavia
porcellus]
Length = 722
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|109509239|ref|XP_228076.4| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Rattus norvegicus]
gi|109509780|ref|XP_001071108.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
[Rattus norvegicus]
Length = 733
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 SFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|344294755|ref|XP_003419081.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Loxodonta
africana]
Length = 763
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|67623161|ref|XP_667863.1| NNP-1/Nop52, novel nuclear protein 1 [Cryptosporidium hominis
TU502]
gi|54659044|gb|EAL37643.1| NNP-1/Nop52, novel nuclear protein 1 [Cryptosporidium hominis]
Length = 493
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 185 HVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
H ++ T +++W+GL++SMW+SDK LIQ+
Sbjct: 41 HNNSMTRLQMLKIWKGLYYSMWLSDKVLIQR 71
>gi|66357230|ref|XP_625793.1| RRp1-like protein [Cryptosporidium parvum Iowa II]
gi|46226917|gb|EAK87883.1| RRp1-like protein [Cryptosporidium parvum Iowa II]
Length = 493
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 185 HVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
H ++ T +++W+GL++SMW+SDK LIQ+
Sbjct: 41 HNNSMTRLQMLKIWKGLYYSMWLSDKVLIQR 71
>gi|344294666|ref|XP_003419037.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Loxodonta africana]
Length = 475
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
FT ++ +++W+GLF+ MWM DK L+Q+
Sbjct: 46 GFTHEELLKVWKGLFYCMWMQDKQLLQE 73
>gi|16741513|gb|AAH16569.1| Ribosomal RNA processing 1 homolog B (S. cerevisiae) [Mus musculus]
Length = 724
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 SFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|335300790|ref|XP_003359032.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA processing protein 1
homolog B-like [Sus scrofa]
Length = 731
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|300123196|emb|CBK24469.2| unnamed protein product [Blastocystis hominis]
Length = 246
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 23/26 (88%)
Query: 190 TDDDFIRLWEGLFFSMWMSDKPLIQK 215
T+ + ++LW+GLF++ WMSDKPL+Q+
Sbjct: 45 TELEMMKLWKGLFYTFWMSDKPLVQE 70
>gi|403271771|ref|XP_003927781.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Saimiri
boliviensis boliviensis]
Length = 728
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 24/31 (77%)
Query: 185 HVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 7 ELGGFSQEELLKIWKGLFYCMWVQDEPLLQE 37
>gi|254911009|ref|NP_082520.2| ribosomal RNA processing protein 1 homolog B isoform 1 [Mus
musculus]
gi|190360292|sp|Q91YK2.2|RRP1B_MOUSE RecName: Full=Ribosomal RNA processing protein 1 homolog B;
AltName: Full=RRP1-like protein B
gi|148708387|gb|EDL40334.1| RIKEN cDNA 2600005C20 [Mus musculus]
Length = 724
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 SFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|395334817|gb|EJF67193.1| Nop52-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 327
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
DA + +LW+G+F+ WMSDKPL+Q+
Sbjct: 42 DALPKSEMAKLWKGVFYCFWMSDKPLVQQ 70
>gi|443898211|dbj|GAC75548.1| hypothetical protein PANT_16d00034 [Pseudozyma antarctica T-34]
Length = 144
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 182 YVNHVDAFTDD--DFIRLWEGLFFSMWMSDKPLIQK 215
Y++ A T D + +LW+GLF+ WMSDKPL+Q+
Sbjct: 61 YLSANGAHTIDPLELGKLWKGLFYCFWMSDKPLVQQ 96
>gi|390351410|ref|XP_798604.3| PREDICTED: uncharacterized protein LOC594061 [Strongylocentrotus
purpuratus]
Length = 719
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 191 DDDFIRLWEGLFFSMWMSDKPLIQK 215
+++ ++LW+GLF+ MWM DKP+IQ+
Sbjct: 8 NEELMKLWKGLFYCMWMCDKPVIQE 32
>gi|452848347|gb|EME50279.1| hypothetical protein DOTSEDRAFT_59390 [Dothistroma septosporum
NZE10]
Length = 255
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y+ + +FT D +++W+GL++SM+MSDKP Q+
Sbjct: 40 YLTRLQSFTSLDLLKIWKGLYYSMFMSDKPRNQQ 73
>gi|403411381|emb|CCL98081.1| predicted protein [Fibroporia radiculosa]
Length = 321
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
D + + +LW+G+F+ WMSDKPL+Q+
Sbjct: 42 DTLPESEMAKLWKGIFYCFWMSDKPLVQQ 70
>gi|408395308|gb|EKJ74490.1| hypothetical protein FPSE_05240 [Fusarium pseudograminearum CS3096]
Length = 239
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K RT +++ + +D D +LW+GLF+++WM+D+PL Q+
Sbjct: 20 KLRTASLETLTTFLSSRSSLSDIDAQKLWKGLFYALWMTDRPLPQQ 65
>gi|396462192|ref|XP_003835707.1| similar to nucleolar protein NOP52 variant [Leptosphaeria maculans
JN3]
gi|312212259|emb|CBX92342.1| similar to nucleolar protein NOP52 variant [Leptosphaeria maculans
JN3]
Length = 247
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K R N+ Y+ ++ D ++LW+GLF+ +WM DKP++Q+
Sbjct: 20 KIRDHALNSLKTYLGAQSEISELDLLKLWKGLFYCLWMQDKPVLQQ 65
>gi|149043583|gb|EDL97034.1| similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 463
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 SFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|440895571|gb|ELR47723.1| Ribosomal RNA processing protein 1-like protein B, partial [Bos
grunniens mutus]
Length = 694
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 2 GFSQEELLKIWKGLFYCMWVQDEPLLQE 29
>gi|355717395|gb|AES05919.1| ribosomal RNA processing 1-like protein B [Mustela putorius furo]
Length = 697
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 2 GFSQEELLKIWKGLFYCMWVQDEPLLQE 29
>gi|297471404|ref|XP_002685189.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Bos
taurus]
gi|296490848|tpg|DAA32961.1| TPA: ribosomal RNA processing 1 homolog B [Bos taurus]
Length = 737
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|326670408|ref|XP_003199207.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Danio
rerio]
Length = 783
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F++++ +++W+GLF+ +WM D PL+Q+
Sbjct: 179 GFSEEELLKIWKGLFYCLWMQDLPLLQE 206
>gi|194663792|ref|XP_001788509.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Bos
taurus]
Length = 726
Score = 40.4 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|74001511|ref|XP_535600.2| PREDICTED: ribosomal RNA processing protein 1 homolog B [Canis
lupus familiaris]
Length = 705
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 13 GFSQEELLKIWKGLFYCMWVQDEPLLQE 40
>gi|389751115|gb|EIM92188.1| ribosomal RNA processing protein [Stereum hirsutum FP-91666 SS1]
Length = 343
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 173 TTLSNNENKYVNHVDAFTDD--------DFIRLWEGLFFSMWMSDKPLIQK 215
+T +K + + +F D D +LW+G+F+ WMSDKPL+Q+
Sbjct: 20 STDKKTRDKAIKSLSSFISDPAATISKNDMTKLWKGVFYCFWMSDKPLVQQ 70
>gi|46116394|ref|XP_384215.1| hypothetical protein FG04039.1 [Gibberella zeae PH-1]
Length = 239
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K RT +++ + +D D +LW+GLF+++WM+D+PL Q+
Sbjct: 20 KLRTASLETLTTFLSSRSSLSDIDAQKLWKGLFYALWMTDRPLPQQ 65
>gi|390366162|ref|XP_003730977.1| PREDICTED: ribosomal RNA processing protein 1 homolog, partial
[Strongylocentrotus purpuratus]
Length = 212
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 191 DDDFIRLWEGLFFSMWMSDKPLIQK 215
+++ ++LW+GLF+ MWM DKP+IQ+
Sbjct: 3 NEELMKLWKGLFYCMWMCDKPVIQE 27
>gi|33878453|gb|AAH14005.1| RRP1B protein [Homo sapiens]
Length = 408
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|384945956|gb|AFI36583.1| ribosomal RNA processing protein 1 homolog B [Macaca mulatta]
Length = 758
Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|380790277|gb|AFE67014.1| ribosomal RNA processing protein 1 homolog B [Macaca mulatta]
Length = 758
Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|355560248|gb|EHH16934.1| RRP1-like protein B [Macaca mulatta]
Length = 758
Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|169844891|ref|XP_001829166.1| rRNA processing protein RRP1 [Coprinopsis cinerea okayama7#130]
gi|116509906|gb|EAU92801.1| ribosomal RNA processing protein [Coprinopsis cinerea okayama7#130]
Length = 316
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+A + D +LW+G+F+ WMSDKPL+Q+
Sbjct: 39 NAISKPDMDKLWKGIFYCFWMSDKPLVQQ 67
>gi|395752875|ref|XP_002830794.2| PREDICTED: ribosomal RNA processing protein 1 homolog B-like,
partial [Pongo abelii]
Length = 386
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|383416789|gb|AFH31608.1| ribosomal RNA processing protein 1 homolog B [Macaca mulatta]
Length = 758
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|119629887|gb|EAX09482.1| KIAA0179, isoform CRA_c [Homo sapiens]
Length = 348
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|402862223|ref|XP_003895467.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Papio
anubis]
Length = 758
Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MW+ D+PL+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWVQDEPLLQE 72
>gi|449672259|ref|XP_002165303.2| PREDICTED: ribosomal RNA processing protein 1 homolog A-like [Hydra
magnipapillata]
Length = 379
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
D + +++W+GLF+ MW SDKPL+Q+
Sbjct: 51 DGLNFTELLKIWKGLFYCMWYSDKPLVQE 79
>gi|170085569|ref|XP_001874008.1| rRNA processing protein RRP1 [Laccaria bicolor S238N-H82]
gi|164651560|gb|EDR15800.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 313
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
D + D +LW+G+F+ WMSDKPL+Q+
Sbjct: 40 DVISKPDMDKLWKGIFYCFWMSDKPLVQQ 68
>gi|451848221|gb|EMD61527.1| hypothetical protein COCSADRAFT_232469 [Cochliobolus sativus
ND90Pr]
Length = 246
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+Y++ ++ D ++LW+GLF+ +WM DKP +Q+
Sbjct: 31 QYLSAQSEISELDLLKLWKGLFYCLWMQDKPALQQ 65
>gi|149043582|gb|EDL97033.1| similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 82
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 24/31 (77%)
Query: 184 NHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+ +F+ ++ +++W+GLF+ MW+ D+PL+Q
Sbjct: 41 SDTGSFSQEELLKIWKGLFYCMWVQDEPLLQ 71
>gi|71022853|ref|XP_761656.1| hypothetical protein UM05509.1 [Ustilago maydis 521]
gi|46101133|gb|EAK86366.1| hypothetical protein UM05509.1 [Ustilago maydis 521]
Length = 491
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 18/20 (90%)
Query: 196 RLWEGLFFSMWMSDKPLIQK 215
+LW+GLF+ WMSDKPLIQ+
Sbjct: 82 KLWKGLFYCFWMSDKPLIQQ 101
>gi|28374422|gb|AAH45402.1| Rrp1 protein [Danio rerio]
Length = 684
Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 23/28 (82%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F++++ +++W+GLF+ +WM D PL+Q+
Sbjct: 57 GFSEEELLKIWKGLFYCLWMQDLPLLQE 84
>gi|302886577|ref|XP_003042178.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723087|gb|EEU36465.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 238
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K RT + + +++ +D D +LW+GLF+++WM+D+P+ Q+
Sbjct: 20 KLRTASLESLSTFLSSRTTLSDTDAQKLWKGLFYALWMTDRPIPQQ 65
>gi|395851146|ref|XP_003798127.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Otolemur
garnettii]
Length = 738
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF MW+ D+PL+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFHCMWVQDEPLLQE 72
>gi|443919124|gb|ELU39382.1| ribosomal RNA processing protein [Rhizoctonia solani AG-1 IA]
Length = 327
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 173 TTLSNNENKYVNHVDAFTDDDF---------IRLWEGLFFSMWMSDKPLIQK 215
+T +K + + F DD +LW+GLF+ WMSDKPL+Q+
Sbjct: 23 STEKKTRDKAIKSLATFLSDDSQKSMSPSERAKLWKGLFYCFWMSDKPLVQQ 74
>gi|388856121|emb|CCF50301.1| related to RRP1-involved in processing rRNA precursor species to
mature rRNAs [Ustilago hordei]
Length = 519
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 18/20 (90%)
Query: 196 RLWEGLFFSMWMSDKPLIQK 215
+LW+GLF+ WMSDKPLIQ+
Sbjct: 84 KLWKGLFYCFWMSDKPLIQQ 103
>gi|449550877|gb|EMD41841.1| hypothetical protein CERSUDRAFT_42980 [Ceriporiopsis subvermispora
B]
Length = 320
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 173 TTLSNNENKYVNHVDAFTDD---------DFIRLWEGLFFSMWMSDKPLIQK 215
+T +K V ++ AF D + +LW+G+F+ WMSDKPL+Q+
Sbjct: 19 STDKKTRDKAVKNLAAFLSDPSRDVLPKTEISKLWKGIFYCFWMSDKPLVQQ 70
>gi|189189892|ref|XP_001931285.1| nucleolar protein NOP52 variant [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972891|gb|EDU40390.1| nucleolar protein NOP52 variant [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 246
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y+ ++ D ++LW+GLF+ +WM DKP++Q+
Sbjct: 32 YLGAQSDISELDLLKLWKGLFYCLWMQDKPVLQQ 65
>gi|402583617|gb|EJW77561.1| hypothetical protein WUBG_11532, partial [Wuchereria bancrofti]
Length = 375
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 84 FKHQQLKPNILKEISE----ELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ 139
+K Q L+ + KE++E E KL+PQ + + +ELI+E E+++ + +
Sbjct: 152 YKEQLLEVQLKKELAEKRRQEGKLIPQQEK----AKRNELIVEKEIRKNLSDLYLKCKER 207
Query: 140 VTGVVVAIKGTPVGNGKFKVSDVCYATPVFK 170
+V AI G PVG+ K+ + A P+ K
Sbjct: 208 TESLVAAITGDPVGSAKYVHLLISVAIPLLK 238
>gi|407926364|gb|EKG19331.1| Nucleolar Nop52 [Macrophomina phaseolina MS6]
Length = 245
Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+Y++ ++ + ++LW+GLFF MW SDKP Q+
Sbjct: 34 RYLDGRTGLSEIELLKLWKGLFFCMWQSDKPRTQQ 68
>gi|351700681|gb|EHB03600.1| Ribosomal RNA processing protein 1-like protein B [Heterocephalus
glaber]
Length = 784
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ +W+ D+PL+Q+
Sbjct: 16 ATRAGGFSQEELLKIWKGLFYCLWVQDEPLLQE 48
>gi|115461058|ref|NP_001054129.1| Os04g0658600 [Oryza sativa Japonica Group]
gi|113565700|dbj|BAF16043.1| Os04g0658600, partial [Oryza sativa Japonica Group]
Length = 550
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+ D ++LW+GLFF W SDKPL Q
Sbjct: 39 LSASDLLKLWKGLFFCFWHSDKPLYQ 64
>gi|19387268|gb|AAL87179.1|AF480497_7 unknown [Oryza sativa Japonica Group]
gi|38346404|emb|CAE04237.2| OSJNBa0011F23.10 [Oryza sativa Japonica Group]
gi|222629700|gb|EEE61832.1| hypothetical protein OsJ_16477 [Oryza sativa Japonica Group]
Length = 558
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+ D ++LW+GLFF W SDKPL Q
Sbjct: 47 LSASDLLKLWKGLFFCFWHSDKPLYQ 72
>gi|326513080|dbj|BAK03447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+D D ++LW+GLFF W +DKPL Q
Sbjct: 44 LSDIDLLKLWKGLFFCFWHADKPLYQ 69
>gi|116310851|emb|CAH67793.1| OSIGBa0132E09-OSIGBa0108L24.7 [Oryza sativa Indica Group]
Length = 558
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+ D ++LW+GLFF W SDKPL Q
Sbjct: 48 LSASDLLKLWKGLFFCFWHSDKPLYQ 73
>gi|20152975|gb|AAM13441.1|AF474072_3 similar to H. sapiens NNP-1 / Nop52 AP001752 (Score = 92; E= 9e-18)
[Hordeum vulgare subsp. vulgare]
Length = 556
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+D D ++LW+GLFF W +DKPL Q
Sbjct: 44 LSDIDLLKLWKGLFFCFWHADKPLYQ 69
>gi|125550067|gb|EAY95889.1| hypothetical protein OsI_17752 [Oryza sativa Indica Group]
Length = 557
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQ 214
+ D ++LW+GLFF W SDKPL Q
Sbjct: 47 LSASDLLKLWKGLFFCFWHSDKPLYQ 72
>gi|330922920|ref|XP_003300028.1| hypothetical protein PTT_11165 [Pyrenophora teres f. teres 0-1]
gi|311326043|gb|EFQ91886.1| hypothetical protein PTT_11165 [Pyrenophora teres f. teres 0-1]
Length = 246
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y+ ++ D ++LW+GLF+ +WM DKP++Q+
Sbjct: 32 YLGAQSDISELDLLKLWKGLFYCLWMQDKPVLQQ 65
>gi|443727672|gb|ELU14330.1| hypothetical protein CAPTEDRAFT_223453 [Capitella teleta]
Length = 280
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 13/54 (24%)
Query: 175 LSNNENKYVNHV-------------DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
L++NE KY + D+ +++W+GL + MWMSDKPL+Q+
Sbjct: 15 LASNEKKYRDRAVVKLKKWLQTKCKGDMLDEQLMKIWKGLHYCMWMSDKPLVQE 68
>gi|70906385|gb|AAZ14904.1| conserved hypothetical protein [Coprinellus disseminatus]
Length = 319
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 196 RLWEGLFFSMWMSDKPLIQK 215
RLW+G+F+ WMSDKPL+Q+
Sbjct: 50 RLWKGIFYCFWMSDKPLVQQ 69
>gi|293336367|ref|NP_001168446.1| uncharacterized protein LOC100382218 [Zea mays]
gi|223948351|gb|ACN28259.1| unknown [Zea mays]
gi|413919784|gb|AFW59716.1| hypothetical protein ZEAMMB73_097134 [Zea mays]
gi|413919785|gb|AFW59717.1| hypothetical protein ZEAMMB73_097134 [Zea mays]
Length = 561
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQ 214
D I+LW+GLFF W +DKPL Q
Sbjct: 55 DLIKLWKGLFFCFWHADKPLYQ 76
>gi|126325223|ref|XP_001364854.1| PREDICTED: ribosomal RNA processing protein 1 homolog B
[Monodelphis domestica]
Length = 761
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MWM D+ L+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWMQDESLLQE 72
>gi|395518577|ref|XP_003763436.1| PREDICTED: ribosomal RNA processing protein 1 homolog B
[Sarcophilus harrisii]
Length = 762
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
F+ ++ +++W+GLF+ MWM D+ L+Q+
Sbjct: 45 GFSQEELLKIWKGLFYCMWMQDESLLQE 72
>gi|409083759|gb|EKM84116.1| hypothetical protein AGABI1DRAFT_117560 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 309
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+A + + +LW+G+F+ WMSDKPL+Q+
Sbjct: 39 NALSRSEMDKLWKGIFYCFWMSDKPLVQQ 67
>gi|336364762|gb|EGN93116.1| hypothetical protein SERLA73DRAFT_145957 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389867|gb|EGO31010.1| hypothetical protein SERLADRAFT_376495 [Serpula lacrymans var.
lacrymans S7.9]
Length = 90
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+A ++ + +LW+G+F+ WMSDKPL+Q+
Sbjct: 21 NAISELEMAKLWKGIFYCFWMSDKPLVQQ 49
>gi|357166471|ref|XP_003580721.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Brachypodium
distachyon]
Length = 564
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQ 214
D ++LW+GLFF W SDKPL Q
Sbjct: 49 DLLKLWKGLFFCFWHSDKPLYQ 70
>gi|320162683|gb|EFW39582.1| hypothetical protein CAOG_00107 [Capsaspora owczarzaki ATCC 30864]
Length = 720
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
T + ++LW+GLFF MW SDKP +Q+
Sbjct: 146 LTRMELLKLWKGLFFLMWHSDKPAVQE 172
>gi|426201182|gb|EKV51105.1| hypothetical protein AGABI2DRAFT_182081 [Agaricus bisporus var.
bisporus H97]
Length = 309
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+A + + +LW+G+F+ WMSDKPL+Q+
Sbjct: 39 NALSKSEVDKLWKGIFYCFWMSDKPLVQQ 67
>gi|296232247|ref|XP_002761506.1| PREDICTED: ribosomal RNA processing protein 1 homolog B [Callithrix
jacchus]
Length = 757
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F+ ++ +++W+GLF+ MW+ D+ L+Q+
Sbjct: 38 KTQRETGGFSQEELLKIWKGLFYCMWLQDEALLQE 72
>gi|342877832|gb|EGU79260.1| hypothetical protein FOXB_10210 [Fusarium oxysporum Fo5176]
Length = 239
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 170 KPRTTLSNNENKYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K R + + + +++ + +D D +LW+GLF+++WM+D+P+ Q+
Sbjct: 20 KLRMSSLESLSTFLSSRSSLSDVDAQKLWKGLFYALWMTDRPIPQQ 65
>gi|393218707|gb|EJD04195.1| Nop52-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 330
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 187 DAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
DA + +LW+G+F+ WMSDKP +Q+
Sbjct: 42 DALPRSEMAKLWKGIFYCYWMSDKPRVQQ 70
>gi|451999137|gb|EMD91600.1| hypothetical protein COCHEDRAFT_1136305 [Cochliobolus
heterostrophus C5]
Length = 246
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+Y+ ++ D ++LW+GLF+ +WM DKP +Q+
Sbjct: 31 QYLGAQCEISELDLLKLWKGLFYCLWMQDKPALQQ 65
>gi|145480785|ref|XP_001426415.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393490|emb|CAK59017.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 27 SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLSDLNETDTEECVIIGTLFKH 86
+K + Q++HIY MR L++ + ++L + IGT+FK
Sbjct: 45 NKSFKAQYSHIYY-----MRYLNLSKRFENNSNDSQFIELIQKIQNQQGTIKAIGTIFKE 99
Query: 87 QQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN------------- 133
+LKP S + ++VS+ D LED R+ L +
Sbjct: 100 MKLKPYYFSSNSNK-------TLQNYVSNEDVCYLEDSSGRVKLQIHNAILCLPNRKDKI 152
Query: 134 IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA----TPVFKP 171
+++ + VTG+ + I+G V N KV P+FKP
Sbjct: 153 VNVSDLVTGITLMIEGQIVANNIVKVERFYLPQLPEAPLFKP 194
>gi|169623460|ref|XP_001805137.1| hypothetical protein SNOG_14973 [Phaeosphaeria nodorum SN15]
gi|111056396|gb|EAT77516.1| hypothetical protein SNOG_14973 [Phaeosphaeria nodorum SN15]
Length = 247
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y+ + D ++LW+GLF+ +WM DKP +Q+
Sbjct: 32 YLGAQAQIAELDLLKLWKGLFYCLWMQDKPALQQ 65
>gi|417412594|gb|JAA52675.1| Putative nucleolar protein, partial [Desmodus rotundus]
Length = 757
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 181 KYVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
K F ++ +++W+GLF+ MW+ ++PL+Q+
Sbjct: 38 KTQRETGGFNREELLKIWKGLFYCMWVQEEPLLQE 72
>gi|390604543|gb|EIN13934.1| ribosomal RNA processing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 318
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQK 215
+ +LW+G+F+ WMSDKPL+Q+
Sbjct: 55 EMAKLWKGIFYCFWMSDKPLVQQ 77
>gi|164658940|ref|XP_001730595.1| hypothetical protein MGL_2391 [Malassezia globosa CBS 7966]
gi|159104491|gb|EDP43381.1| hypothetical protein MGL_2391 [Malassezia globosa CBS 7966]
Length = 407
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+ + + +LW+G+F+ WMSDKPL+Q+
Sbjct: 92 SMSSTELSKLWKGIFYCFWMSDKPLVQQ 119
>gi|346973206|gb|EGY16658.1| ribosomal RNA-processing protein [Verticillium dahliae VdLs.17]
Length = 270
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 195 IRLWEGLFFSMWMSDKPLIQK 215
++LW+GLFF+MWM DKP+ Q+
Sbjct: 45 LKLWKGLFFAMWMCDKPVPQQ 65
>gi|154299996|ref|XP_001550415.1| hypothetical protein BC1G_11187 [Botryotinia fuckeliana B05.10]
gi|347832048|emb|CCD47745.1| similar to ribosomal RNA-processing protein [Botryotinia
fuckeliana]
Length = 269
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y++ + T D++++ GLF+SMWM D+PL Q+
Sbjct: 32 YLSASRSLTPLDYLKIHSGLFYSMWMCDRPLPQQ 65
>gi|302423822|ref|XP_003009741.1| rRNA processing protein RRP1 [Verticillium albo-atrum VaMs.102]
gi|261352887|gb|EEY15315.1| ribosomal RNA-processing protein [Verticillium albo-atrum VaMs.102]
Length = 269
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 195 IRLWEGLFFSMWMSDKPLIQK 215
++LW+GLFF+MWM DKP+ Q+
Sbjct: 45 LKLWKGLFFAMWMCDKPVPQQ 65
>gi|406862690|gb|EKD15739.1| nucleolar protein NOP52 variant [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 241
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQK 215
+ ++LW+GLF+ MWMSD+P Q+
Sbjct: 43 ELMKLWKGLFYCMWMSDRPRTQQ 65
>gi|393245082|gb|EJD52593.1| Nop52-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 321
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 186 VDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
V ++ + +LW+ LFF WMSDKPL+Q+
Sbjct: 26 VASYPKAEMDKLWKALFFCYWMSDKPLVQQ 55
>gi|258564392|ref|XP_002582941.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908448|gb|EEP82849.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 410
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 52/173 (30%)
Query: 11 RPTADYKNLSQCFRLA---SKDYSKQFAHIYAVRLNKMRECLLARVSQKWGKSVSVLKLS 67
R + Y LS F LA +++Y +Q+A +Y +RL +++ + + +W
Sbjct: 23 RQESAYNPLS-TFHLAPGETRNYQQQYADMYFLRLARLKPVVSQIAAAEWEG-------- 73
Query: 68 DLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFV----SDSDELILED 123
F H P P+ ++ +S + +LED
Sbjct: 74 ----------------FTHWTAAP---------------PRRKTYLDTSNQESAQTMLED 102
Query: 124 ELQRIPLHGNIDIHNQ--VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTT 174
E R+ L G + + + VTG VVA+ GT NG F+V DV P P+ T
Sbjct: 103 ESGRLRLTGTL-LQSALLVTGAVVAVLGTENANGDFEVIDV--KVPDLPPQPT 152
>gi|11096314|gb|AAG30293.1|AF312394_1 novel nuclear protein Nnp1 variant 1 [Mus musculus]
Length = 410
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQK 215
+ +++W+GLF+ MWM DKPL Q+
Sbjct: 2 ELLKVWKGLFYCMWMQDKPLQQE 24
>gi|328855232|gb|EGG04360.1| hypothetical protein MELLADRAFT_89447 [Melampsora larici-populina
98AG31]
Length = 397
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 20/95 (21%)
Query: 141 TGVVVAIKGTPVGNGKFKVSD--VCYATPVFKPRTTLSNNE-----------------NK 181
+ V ++KG + GKF S+ V RT +SN++ N
Sbjct: 37 SKVQASLKGDTIPLGKFLASNDKSTRDRAVAALRTFISNSDQTPNDLFSIIEFDNEDWNS 96
Query: 182 YVNHVDAFTDD-DFIRLWEGLFFSMWMSDKPLIQK 215
+ + DA D+ +L++GLF+ WMSDKPLIQ+
Sbjct: 97 HTSIDDARLDNLSMSKLYKGLFYCYWMSDKPLIQQ 131
>gi|310800790|gb|EFQ35683.1| nucleolar protein,Nop52 [Glomerella graminicola M1.001]
Length = 259
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 20/23 (86%)
Query: 193 DFIRLWEGLFFSMWMSDKPLIQK 215
D ++LW+GLF++MWM D+P+ Q+
Sbjct: 43 DALKLWKGLFYAMWMCDRPVPQQ 65
>gi|388580925|gb|EIM21236.1| Nop52-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 275
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 196 RLWEGLFFSMWMSDKPLIQK 215
+LW G+F+ WMSDKPL+Q+
Sbjct: 46 KLWRGIFYCFWMSDKPLVQQ 65
>gi|388519283|gb|AFK47703.1| unknown [Medicago truncatula]
Length = 546
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 191 DDDFIRLWEGLFFSMWMSDKPLIQ 214
++D +LW+GLF+ +W SDKPL+Q
Sbjct: 45 EEDAKKLWKGLFYCVWHSDKPLVQ 68
>gi|357480471|ref|XP_003610521.1| Ribosomal RNA processing protein-like protein [Medicago truncatula]
gi|355511576|gb|AES92718.1| Ribosomal RNA processing protein-like protein [Medicago truncatula]
Length = 546
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 191 DDDFIRLWEGLFFSMWMSDKPLIQ 214
++D +LW+GLF+ +W SDKPL+Q
Sbjct: 45 EEDAKKLWKGLFYCVWHSDKPLVQ 68
>gi|145539045|ref|XP_001455217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423016|emb|CAK87820.1| unnamed protein product [Paramecium tetraurelia]
Length = 459
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 74 TEECVIIGTLFKHQQLKPNILKEISE-ELKLVPQPQHTHFVSD-SDELILEDELQRIPLH 131
T + +IGT+FK +LKP ++ +E ++ Q + T ++ D S + LE ++ L
Sbjct: 88 TGKVKVIGTIFKIMRLKPYYFQQYTEIKIAESVQNEETCYLEDRSGRIKLEFTNCKLNLP 147
Query: 132 GN----IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCYA----TPVFKP 171
N I+ + +TG+VV I+G VGN V + P++KP
Sbjct: 148 NNTSKTINAEDLITGIVVLIEGEIVGNNIVNVQSINLPDFIDPPIYKP 195
>gi|156062870|ref|XP_001597357.1| hypothetical protein SS1G_01551 [Sclerotinia sclerotiorum 1980]
gi|154696887|gb|EDN96625.1| hypothetical protein SS1G_01551 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 268
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y++ T D++++ GLF+SMWM D+PL Q+
Sbjct: 32 YLSSSRPLTPLDYLKIHSGLFYSMWMCDRPLPQQ 65
>gi|397571779|gb|EJK47956.1| hypothetical protein THAOC_33287 [Thalassiosira oceanica]
Length = 533
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 30 YSKQFAHIYAVRLNKMRECLL--ARVSQKWGKSVSVLKLSD--LNETDTEECVIIGTLFK 85
YS+Q++H+Y RL +R+ + A+ + + + +S+ + ++ +I+GT+ K
Sbjct: 46 YSRQYSHVYRARLEALRQRCVDNAKAALREEGVAEDVAVSNQIIEVSEGTLSIIVGTVVK 105
Query: 86 HQQLKPNILKEISEELK--------LVPQPQHTHF----------VSDSDELILEDELQR 127
K LK + L P+ F S D L LEDE R
Sbjct: 106 EMDPKTRRLKVNHDTYGHLGDASTFLFPESDKAGFQQSLKSLAFDSSKGDTLYLEDESGR 165
Query: 128 IPL--------------HGNIDIHNQVTGVVVAIKGTPVGN-GKFKVSDVCYATP 167
+ L +D + TGVVVAI G G KV V +A P
Sbjct: 166 VELAPEEDEDGVSSKASSSPLDPNRIATGVVVAITGEICAEKGVMKVKSVHFAGP 220
>gi|424835825|ref|ZP_18260484.1| putative D-proline reductase proprotein PrdA [Clostridium
sporogenes PA 3679]
gi|365977695|gb|EHN13793.1| putative D-proline reductase proprotein PrdA [Clostridium
sporogenes PA 3679]
Length = 253
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 89 LKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID------IHNQVTG 142
L+ NI E+ ++ + SD+ ++ + L P+ ++ I N +TG
Sbjct: 35 LRKNIGVSALEKENIIENLKINIIYSDNHDMFINSVLDIFPIASKVEGKIGEGITNVLTG 94
Query: 143 VVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNN----ENKYVNHVDAFTDDDFIRLW 198
VVV I G +G F+ +++ + + K + + N E+ + HVD + R
Sbjct: 95 VVVMITGVEIGG--FQAANIGSSEGILKDQIKFNKNGTPAEDDIIIHVDVTLKNGGSRSR 152
Query: 199 EGLFFSMWMSDK 210
EG+ S + DK
Sbjct: 153 EGIMASHRVCDK 164
>gi|453089878|gb|EMF17918.1| Nop52-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 269
Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
Y++ FT D ++LW+GL + M+MSDKP Q+
Sbjct: 37 YLSRSKPFTSLDLLKLWKGLHYCMFMSDKPRNQQ 70
>gi|392578375|gb|EIW71503.1| hypothetical protein TREMEDRAFT_28117 [Tremella mesenterica DSM
1558]
Length = 345
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 189 FTDDDFIRLWEGLFFSMWMSDKPLIQK 215
++ + +LW+ LF+ WMSDKPL+Q+
Sbjct: 57 ISEMEMTKLWKSLFYCFWMSDKPLVQQ 83
>gi|366990193|ref|XP_003674864.1| hypothetical protein NCAS_0B04070 [Naumovozyma castellii CBS 4309]
gi|342300728|emb|CCC68491.1| hypothetical protein NCAS_0B04070 [Naumovozyma castellii CBS 4309]
Length = 288
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 188 AFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
+F F +LW+GL+F+MW SD+P Q+
Sbjct: 36 SFKQSQFNKLWKGLYFAMWFSDRPRPQQ 63
>gi|402222481|gb|EJU02547.1| Nop52-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 300
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 183 VNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQK 215
V+ A + +LW+GLF+ W SDKPL+Q+
Sbjct: 41 VSSPHALPRQEMTKLWKGLFYCYWHSDKPLVQQ 73
>gi|366999432|ref|XP_003684452.1| hypothetical protein TPHA_0B03480 [Tetrapisispora phaffii CBS 4417]
gi|357522748|emb|CCE62018.1| hypothetical protein TPHA_0B03480 [Tetrapisispora phaffii CBS 4417]
Length = 287
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 194 FIRLWEGLFFSMWMSDKPLIQK 215
F +LW+GL+FSMW SDKP Q+
Sbjct: 42 FDKLWKGLYFSMWFSDKPRPQQ 63
>gi|254565093|ref|XP_002489657.1| Essential conserved nucleolar protein necessary for biogenesis of
60S ribosomal subunits [Komagataella pastoris GS115]
gi|238029453|emb|CAY67376.1| Essential conserved nucleolar protein necessary for biogenesis of
60S ribosomal subunits [Komagataella pastoris GS115]
gi|328350076|emb|CCA36476.1| Ribosomal RNA processing protein 1 homolog B [Komagataella pastoris
CBS 7435]
Length = 367
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 182 YVNHVDAFTDDDFIRLWEGLFFSMWMSDKPLIQKY 216
++ H + + +LW+GLF++MW DKP+ Q++
Sbjct: 28 FLKHSKVLPELQYQKLWKGLFYAMWHCDKPIPQQH 62
>gi|340345862|ref|ZP_08668994.1| Putative copper-binding protein, plastocyanin/azurin family protein
[Candidatus Nitrosoarchaeum koreensis MY1]
gi|339521003|gb|EGP94726.1| Putative copper-binding protein, plastocyanin/azurin family protein
[Candidatus Nitrosoarchaeum koreensis MY1]
Length = 1663
Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 80 IGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNIDIHNQ 139
+ L ++ L LKEI E+LK+V + Q V + ++ L+D QR L ID +
Sbjct: 577 VKELSRNNDLDKEQLKEIKEQLKIVTK-QIKSVVKNLEKNNLDDSAQR--LDEIIDTIEE 633
Query: 140 VTGVVVAIKGTPVGNGKFKVSDVCYATPVFKPRTTLSNNENKY 182
G+ P+ G++K S T ++ P+ L N KY
Sbjct: 634 TAGI------EPIQTGEWKDSRNTIVTEIYDPQGNLVNTVTKY 670
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,444,012,647
Number of Sequences: 23463169
Number of extensions: 140044162
Number of successful extensions: 315501
Number of sequences better than 100.0: 656
Number of HSP's better than 100.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 314419
Number of HSP's gapped (non-prelim): 677
length of query: 216
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 79
effective length of database: 9,144,741,214
effective search space: 722434555906
effective search space used: 722434555906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)