Query psy8637
Match_columns 216
No_of_seqs 131 out of 362
Neff 5.8
Searched_HMMs 13730
Date Fri Aug 16 23:57:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8637.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8637hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n9wa1 b.40.4.1 (A:1-93) Aspa 58.8 11 0.0008 25.1 5.8 46 118-164 33-84 (93)
2 d2jdid2 b.49.1.1 (D:10-81) F1 41.6 12 0.00085 24.6 3.4 20 141-168 1-22 (72)
3 d1eova1 b.40.4.1 (A:71-204) As 40.9 27 0.0019 24.6 5.8 35 118-152 57-103 (134)
4 d1j6qa_ b.40.9.1 (A:) Heme cha 40.1 45 0.0033 22.7 6.7 46 118-163 50-97 (100)
5 d1l0wa1 b.40.4.1 (A:1-104) Asp 38.9 22 0.0016 24.2 4.8 65 72-160 14-93 (104)
6 d1jmca2 b.40.4.3 (A:299-420) R 38.1 7.8 0.00057 27.3 2.2 70 62-151 6-84 (122)
7 d1o7ia_ b.40.4.3 (A:) Archaeal 36.1 14 0.0011 25.4 3.5 69 65-150 4-74 (115)
8 d1e1oa1 b.40.4.1 (A:11-153) Ly 34.7 18 0.0013 26.1 3.9 47 118-164 74-134 (143)
9 d1c0aa1 b.40.4.1 (A:1-106) Asp 33.4 20 0.0015 24.4 3.8 34 118-151 35-75 (106)
10 d1sr3a_ b.40.9.1 (A:) Heme cha 32.6 17 0.0012 25.6 3.3 47 118-164 52-99 (114)
11 d1b8aa1 b.40.4.1 (A:1-103) Asp 31.5 26 0.0019 23.6 4.1 35 118-152 36-79 (103)
12 d1gm5a2 b.40.4.9 (A:106-285) R 27.2 32 0.0024 24.9 4.3 108 64-198 52-168 (180)
13 d2z0sa1 b.40.4.5 (A:60-147) S1 24.0 67 0.0049 20.4 5.1 40 94-133 37-80 (88)
14 d1wjja_ b.40.4.3 (A:) Hypothet 21.2 19 0.0014 26.1 1.8 34 118-151 65-99 (145)
15 d2b59b2 b.3.2.2 (B:8-103) Cell 20.4 28 0.002 23.7 2.3 25 140-164 23-52 (96)
No 1
>d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=58.84 E-value=11 Score=25.11 Aligned_cols=46 Identities=17% Similarity=0.240 Sum_probs=30.0
Q ss_pred eEEEecCCCcEEEEeccCCCCceeeeEEEEEeccC----CCCcEEE--EEEEe
Q psy8637 118 ELILEDELQRIPLHGNIDIHNQVTGVVVAIKGTPV----GNGKFKV--SDVCY 164 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~i~~~~lVTGvVvaV~G~~~----~~G~F~V--~di~~ 164 (216)
.+.|-|.||.+.+.-+- ...+-.|.+|.|.|.+. ..|.+++ +++-.
T Consensus 33 Fi~LrD~sg~iQ~v~~~-~~~~~~e~~v~v~G~v~~~~~~~~~~Ei~v~~i~i 84 (93)
T d1n9wa1 33 FLLLRDRSGVVQVVTGG-LKLPLPESALRVRGLVVENAKAPGGLEVQAKEVEV 84 (93)
T ss_dssp EEEEEETTEEEEEEEES-CCCCCTTCEEEEEEEEEECTTSTTSEEEEEEEEEE
T ss_pred EEEEEcCCccceEEecc-ccccccceEEEEEEEEEECCCCCCCEEEEEeEEEE
Confidence 56788999999987541 12334566777777653 2477876 55555
No 2
>d2jdid2 b.49.1.1 (D:10-81) F1 ATP synthase beta subunit, domain 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=41.56 E-value=12 Score=24.59 Aligned_cols=20 Identities=45% Similarity=0.699 Sum_probs=16.7
Q ss_pred eeeEEEEEeccCCCCcEEEEEEEe-c-CCC
Q psy8637 141 TGVVVAIKGTPVGNGKFKVSDVCY-A-TPV 168 (216)
Q Consensus 141 TGvVvaV~G~~~~~G~F~V~di~~-~-~~p 168 (216)
||-|++|.|- |.|+-| + +||
T Consensus 1 TG~VvqV~G~--------VVDV~F~~~lP~ 22 (72)
T d2jdid2 1 TGRIVAVIGA--------VVDVQFDEGLPP 22 (72)
T ss_dssp EEEEEEEETT--------EEEEEESSCCCC
T ss_pred CceEEEEECC--------EEEEECCCCCCc
Confidence 8999999997 889999 3 444
No 3
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.90 E-value=27 Score=24.60 Aligned_cols=35 Identities=14% Similarity=0.013 Sum_probs=26.1
Q ss_pred eEEEecCCCcEEEEec---cC---------CCCceeeeEEEEEeccC
Q psy8637 118 ELILEDELQRIPLHGN---ID---------IHNQVTGVVVAIKGTPV 152 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~---i~---------~~~lVTGvVvaV~G~~~ 152 (216)
.+.|-|.+|++.+.-. .. ...+=+|.+|.|.|.+.
T Consensus 57 F~~LrD~sg~iQ~~v~~~~~~~~~~~~~~~~~~l~~es~V~V~G~v~ 103 (134)
T d1eova1 57 FLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVK 103 (134)
T ss_dssp EEEEEETTEEEEEEEECCSSSSSCHHHHHHHTTCCTTCEEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEeccccchhHHHHHHHhcCCCCCEEEEEEEEE
Confidence 5789999999988733 11 13566899999999874
No 4
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=40.09 E-value=45 Score=22.65 Aligned_cols=46 Identities=15% Similarity=0.154 Sum_probs=37.3
Q ss_pred eEEEecC-CCcEEEEec-cCCCCceeeeEEEEEeccCCCCcEEEEEEE
Q psy8637 118 ELILEDE-LQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVC 163 (216)
Q Consensus 118 ~l~LEDe-sgRI~L~G~-i~~~~lVTGvVvaV~G~~~~~G~F~V~di~ 163 (216)
.-.+.|. ...|...=+ +-++.|--|.=|-|.|...++|.|...++.
T Consensus 50 ~F~itD~~~~~i~V~Y~G~lPdlF~eg~gVVveG~~~~~g~F~A~~vl 97 (100)
T d1j6qa_ 50 QFAVHDSLGGEILVTYDDLLPDLFREGQGIVAQGVLGEDGKLAATEVL 97 (100)
T ss_dssp EEEEECTTCCCEEEEECSCCTTSCCSSSEEEEEEEECSTTSEEEEEEE
T ss_pred EEEEcCCceeEEEEEeCCCCCchhcCCCeEEEEEEECCCCEEEEEEEE
Confidence 4677886 457888654 667788889999999999999999998875
No 5
>d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=38.95 E-value=22 Score=24.24 Aligned_cols=65 Identities=23% Similarity=0.163 Sum_probs=38.6
Q ss_pred CCCCeEEEEEEEEeeCCCCCchHHHHHhhhcCCCCCCCCCcCCCCCeEEEecCCCcEEEEeccC------CCCceeeeEE
Q psy8637 72 TDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGNID------IHNQVTGVVV 145 (216)
Q Consensus 72 ~~g~~cvvIGTlyK~mklKPsIL~e~~~e~~~~~~~~~~~y~s~~D~l~LEDesgRI~L~G~i~------~~~lVTGvVv 145 (216)
..|+.+.|-|=+...=..+ + =-.+.|-|.+|.|.++-+-+ ...+-.+-||
T Consensus 14 ~~g~~V~l~GWV~~~R~~g--------------------~----i~Fi~LRD~~G~iQ~v~~~~~~~~~~~~~l~~Es~I 69 (104)
T d1l0wa1 14 HVGEEVVLEGWVNRRRDLG--------------------G----LIFLDLRDREGLVQLVAHPASPAYATAERVRPEWVV 69 (104)
T ss_dssp GTTCEEEEEEEEEEEEECS--------------------S----CEEEEEEETTEEEEEEECTTSTTHHHHTTCCTTCEE
T ss_pred HCCCEEEEEEEEEehhcCC--------------------C----eEEEEEECCCCceEEecccchhHHHHHhhcCcccEE
Confidence 4688888888886631111 1 11467889999988875311 1334556666
Q ss_pred EEEeccC---------CCCcEEEE
Q psy8637 146 AIKGTPV---------GNGKFKVS 160 (216)
Q Consensus 146 aV~G~~~---------~~G~F~V~ 160 (216)
.|.|.+. +.|.|||.
T Consensus 70 ~V~G~V~~r~~~n~~~~tG~iEi~ 93 (104)
T d1l0wa1 70 RAKGLVRLRPEPNPRLATGRVEVE 93 (104)
T ss_dssp EEEEEEEECSSCCTTSTTTTEEEE
T ss_pred EEEEEEeeCCccCCCCCCCCEEEE
Confidence 6666642 34667664
No 6
>d1jmca2 b.40.4.3 (A:299-420) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.08 E-value=7.8 Score=27.27 Aligned_cols=70 Identities=20% Similarity=0.205 Sum_probs=40.6
Q ss_pred ceeeeeecccCCCCeEEEEEEEEeeCCCCCchHHHHHhhhcCCCCCCCCCcCC--CCCeEEEecCCCc-EEEE--ec---
Q psy8637 62 SVLKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVS--DSDELILEDELQR-IPLH--GN--- 133 (216)
Q Consensus 62 ~i~kll~l~~~~g~~cvvIGTlyK~mklKPsIL~e~~~e~~~~~~~~~~~y~s--~~D~l~LEDesgR-I~L~--G~--- 133 (216)
|+..|.++ ..+..+=|||.|-.-.+++. +.. .+.-. ..-.+.|.|+||+ |+|+ |+
T Consensus 6 ~i~di~~~--~~~~~vDViGvv~~v~~~~~-----i~~----------k~~g~~~~kR~i~i~D~t~~~i~vtLWg~~a~ 68 (122)
T d1jmca2 6 GIDDLENK--SKDSLVDIIGICKSYEDATK-----ITV----------RSNNREVAKRNIYLMDTSGKVVTATLWGEDAD 68 (122)
T ss_dssp CGGGGGGS--CTTCEEEEEEEEEEECCCEE-----EEE----------TTTTEEEEEEEEEEECTTCCEEEEEEEHHHHH
T ss_pred eHHHhhcc--CCCCeEEEEEEEEEccCcEE-----EEE----------cCCCCceeEEEEEEEcCCCCEEEEEEEchHhh
Confidence 34444344 46777779999987654431 110 00111 1237899999996 7776 54
Q ss_pred -cCCCCceeeeEEEEEecc
Q psy8637 134 -IDIHNQVTGVVVAIKGTP 151 (216)
Q Consensus 134 -i~~~~lVTGvVvaV~G~~ 151 (216)
++. -.|-|||+.|.-
T Consensus 69 ~~~~---~~~~Vi~~k~~~ 84 (122)
T d1jmca2 69 KFDG---SRQPVLAIKGAR 84 (122)
T ss_dssp HCCC---TTCCEEEEEEEE
T ss_pred hhCC---CCCCEEEEeeeE
Confidence 332 246688888853
No 7
>d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=36.14 E-value=14 Score=25.37 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=41.7
Q ss_pred eeeecccCCCCe-EEEEEEEEeeCCCCCchHHHHHhhhcCCCCCCCCCcCCCCCeEEEecCCCcEEEEec-cCCCCceee
Q psy8637 65 KLSDLNETDTEE-CVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHGN-IDIHNQVTG 142 (216)
Q Consensus 65 kll~l~~~~g~~-cvvIGTlyK~mklKPsIL~e~~~e~~~~~~~~~~~y~s~~D~l~LEDesgRI~L~G~-i~~~~lVTG 142 (216)
||-+| .+|.. +-|+|.|..-.+.| ++.... -...=-.+.+.|++|+|+++-= -....+.-|
T Consensus 4 kI~dL--~pg~~~v~i~~~V~~~~~~r-----~~~~~~----------g~~~v~~~~i~DeTG~i~~~~W~~~~~~l~~G 66 (115)
T d1o7ia_ 4 KVGNL--KPNMESVNVTVRVLEASEAR-----QIQTKN----------GVRTISEAIVGDETGRVKLTLWGKHAGSIKEG 66 (115)
T ss_dssp CGGGC--CTTCSSEEEEEEEEEECCCE-----EECCTT----------CCEEEEEEEEEETTEEEEEEEEGGGTTCCCTT
T ss_pred cHHHC--CCCCCCEEEEEEEEECCCCc-----eeecCC----------CCEEEEEEEEEcCCCeEEEEEeccccccCCCC
Confidence 66778 47764 66889888764433 111100 0000136889999999999831 123356678
Q ss_pred eEEEEEec
Q psy8637 143 VVVAIKGT 150 (216)
Q Consensus 143 vVvaV~G~ 150 (216)
-|+.+.|.
T Consensus 67 dvv~i~na 74 (115)
T d1o7ia_ 67 QVVKIENA 74 (115)
T ss_dssp CEEEEEEE
T ss_pred CEEEEeeE
Confidence 88887654
No 8
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=34.67 E-value=18 Score=26.14 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=31.6
Q ss_pred eEEEecCCCcEEEEec---cCC-------CCceeeeEEEEEecc--CCCCcEEE--EEEEe
Q psy8637 118 ELILEDELQRIPLHGN---IDI-------HNQVTGVVVAIKGTP--VGNGKFKV--SDVCY 164 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~---i~~-------~~lVTGvVvaV~G~~--~~~G~F~V--~di~~ 164 (216)
.+-|.|++|+|.+.-+ +.. ..+=-|=+|+|.|.. +..|++.| +++-.
T Consensus 74 F~~i~D~~g~iQi~~~~~~~~~~~~~~~~k~ld~GDiIgv~G~~~~TktGElsi~~~~~~l 134 (143)
T d1e1oa1 74 FVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRL 134 (143)
T ss_dssp EEEEEETTEEEEEEEETTTSSTTHHHHTGGGCCTTCEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEeCCceEEEEEccccchhhhHHHHHhcCCcccEEEeecccEECCCCcEEEEeeEEEE
Confidence 5689999999999643 211 222347789999987 46688764 45544
No 9
>d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=33.40 E-value=20 Score=24.44 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=23.2
Q ss_pred eEEEecCCCcEEEEeccC-------CCCceeeeEEEEEecc
Q psy8637 118 ELILEDELQRIPLHGNID-------IHNQVTGVVVAIKGTP 151 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~i~-------~~~lVTGvVvaV~G~~ 151 (216)
.+.|-|.+|.+.++-.-+ ...+-++.+|.|.|++
T Consensus 35 Fi~LRD~~G~~Q~v~~~~~~~~~~~~~~l~~Es~v~V~G~V 75 (106)
T d1c0aa1 35 FIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTV 75 (106)
T ss_dssp EEEEEETTEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEE
T ss_pred EEEEEcCCeEEeEEecccchhHHHHHHhhCccceEEEEeEE
Confidence 568999999999874311 2345567777777765
No 10
>d1sr3a_ b.40.9.1 (A:) Heme chaperone CcmE {Escherichia coli [TaxId: 562]}
Probab=32.58 E-value=17 Score=25.59 Aligned_cols=47 Identities=13% Similarity=0.053 Sum_probs=39.8
Q ss_pred eEEEecCCCcEEEEec-cCCCCceeeeEEEEEeccCCCCcEEEEEEEe
Q psy8637 118 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTPVGNGKFKVSDVCY 164 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~-i~~~~lVTGvVvaV~G~~~~~G~F~V~di~~ 164 (216)
.-.++|....|...-+ +-++.|--|.-|-|.|...++|.|....+.-
T Consensus 52 ~F~itD~~~~i~V~Y~GilPdlF~eg~~VVveG~~~~~~~f~A~~vla 99 (114)
T d1sr3a_ 52 TFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 99 (114)
T ss_dssp EEEEECSSCEEEEEEESCCCTTCCTTSEEEEEEEECSSSEEEESSCBC
T ss_pred EEEEccCCcEEEEEecCCCChhhcCCCeEEEEEEECCCCEEEEEEEEe
Confidence 3788999999999866 6688888899999999988899998887764
No 11
>d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=31.49 E-value=26 Score=23.64 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=25.3
Q ss_pred eEEEecCCCcEEEEec---cC------CCCceeeeEEEEEeccC
Q psy8637 118 ELILEDELQRIPLHGN---ID------IHNQVTGVVVAIKGTPV 152 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~---i~------~~~lVTGvVvaV~G~~~ 152 (216)
.+.|-|.+|.|.++-+ ++ ...+=+|.+|.|.|.+.
T Consensus 36 Fi~LrD~sg~iQ~v~~~~~~~~~~~~~~~~l~~es~v~V~G~v~ 79 (103)
T d1b8aa1 36 FLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVN 79 (103)
T ss_dssp EEEEEETTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEEEEE
T ss_pred EEEEEcCCEeeeEEEeccccchhhhhHHhhCCcceEEEEEEEEE
Confidence 5689999999999843 21 13455788888888753
No 12
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=27.17 E-value=32 Score=24.88 Aligned_cols=108 Identities=19% Similarity=0.279 Sum_probs=61.8
Q ss_pred eeeeecccCCCCeEEEEEEEEeeCCCCCchHHHHHhhhcCCCCCCCCCcCCCCCeEEEecCCCcEEEEe---c-cCCC-C
Q psy8637 64 LKLSDLNETDTEECVIIGTLFKHQQLKPNILKEISEELKLVPQPQHTHFVSDSDELILEDELQRIPLHG---N-IDIH-N 138 (216)
Q Consensus 64 ~kll~l~~~~g~~cvvIGTlyK~mklKPsIL~e~~~e~~~~~~~~~~~y~s~~D~l~LEDesgRI~L~G---~-i~~~-~ 138 (216)
..|-++ ..|+.+.|.|+|-+....+ -..+. -=++.++|++|+|.|.= . +... .
T Consensus 52 ~~i~~l--~~g~~vti~g~V~~~~~~~---------------~~~~~-----~~~~~v~D~~g~i~l~fFn~~~~~~~~k 109 (180)
T d1gm5a2 52 FKLNDL--LPGEKVTTQGKIVSVETKK---------------FQNMN-----ILTAVLSDGLVHVPLKWFNQDYLQTYLK 109 (180)
T ss_dssp CCSSCC--CSSCCCEEEECCCCCEEEE---------------CSSCE-----EEEEEECCSSCCEEEEECSCCTTHHHHH
T ss_pred cccccc--CcceeeeeeeEEEeecccc---------------ccccc-----eeEEEEEeccceEEEEEeCcHHHHHHHh
Confidence 345555 6899999999987532100 00111 12678999999999962 1 1111 1
Q ss_pred ceeeeEEEEEeccCC---CCcEEEEEEEe-cCCCCCCcccCCCCCCcceeecCCCCHHHHHHHh
Q psy8637 139 QVTGVVVAIKGTPVG---NGKFKVSDVCY-ATPVFKPRTTLSNNENKYVNHVDAFTDDDFIRLW 198 (216)
Q Consensus 139 lVTGvVvaV~G~~~~---~G~F~V~di~~-~~~pq~p~~~~~~~~~~yv~lvsgl~~~d~~~l~ 198 (216)
+.+|..+.|.|.... .|.+++.+.-+ ...... .... .|-| -+..||+...+.|+-
T Consensus 110 ~~~G~~v~v~Gkvk~~~~~~~~q~~~p~~~~~~~~~-~~~i---~PvY-~lt~gls~~~i~k~I 168 (180)
T d1gm5a2 110 QLTGKEVFVTGTVKSNAYTGQYEIHNAEVTPKEGEY-VRRI---LPIY-RLTSGISQKQMRKIF 168 (180)
T ss_dssp TTCSSCEEEEEEECSCCTTSSCCEEEEEEECSCCSS-SSSC---EEEC-CCBTTBCHHHHHHHH
T ss_pred hhcCceEEEEEEEeeccccceeeccCceeccccccc-cCCE---Eeec-cCCCCcCHHHHHHHH
Confidence 236999999998643 57888888766 321110 0000 0011 123689988877663
No 13
>d2z0sa1 b.40.4.5 (A:60-147) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=24.02 E-value=67 Score=20.38 Aligned_cols=40 Identities=8% Similarity=0.042 Sum_probs=24.6
Q ss_pred HHHHHhhhcCCCCCCCCCcCCCCCeE---EEe-cCCCcEEEEec
Q psy8637 94 LKEISEELKLVPQPQHTHFVSDSDEL---ILE-DELQRIPLHGN 133 (216)
Q Consensus 94 L~e~~~e~~~~~~~~~~~y~s~~D~l---~LE-DesgRI~L~G~ 133 (216)
+.|++......+......+...+|.+ +++ |+.+||.|+-.
T Consensus 37 ~se~~~~~~~~~~~~~~~~~~vGd~V~~kV~~vd~~~~i~Ls~k 80 (88)
T d2z0sa1 37 VQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKTRSPLLTVQ 80 (88)
T ss_dssp HHHHHTSCCCTTTTCCTTSSCTTCEEEEEEEEECTTSCEEEECC
T ss_pred hHHhCcccccccccchhhhcccCcEEEEEEEEECCCCCEEEEEe
Confidence 34666554333333344677788865 333 88899999854
No 14
>d1wjja_ b.40.4.3 (A:) Hypothetical protein At4g28440 (F20O9.120) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.25 E-value=19 Score=26.05 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=21.4
Q ss_pred eEEEecCCCcEEEEec-cCCCCceeeeEEEEEecc
Q psy8637 118 ELILEDELQRIPLHGN-IDIHNQVTGVVVAIKGTP 151 (216)
Q Consensus 118 ~l~LEDesgRI~L~G~-i~~~~lVTGvVvaV~G~~ 151 (216)
.+.+.||+|||+++-= -....+.-|-+|.+.|.-
T Consensus 65 ~~~v~DeTG~i~~tlW~~~~~~l~~Gd~v~i~na~ 99 (145)
T d1wjja_ 65 ECLIGDETGCILFTARNDQVDLMKPGATVILRNSR 99 (145)
T ss_dssp EEEEECSSCEEEEEECTTHHHHTCTTCEEEEEEEE
T ss_pred EEEEEccCCeEEEEEEeccccccCcCCEEEEeeEE
Confidence 5799999999999731 011224456666666543
No 15
>d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}
Probab=20.40 E-value=28 Score=23.68 Aligned_cols=25 Identities=36% Similarity=0.469 Sum_probs=20.5
Q ss_pred eeeeEEEEEecc-----CCCCcEEEEEEEe
Q psy8637 140 VTGVVVAIKGTP-----VGNGKFKVSDVCY 164 (216)
Q Consensus 140 VTGvVvaV~G~~-----~~~G~F~V~di~~ 164 (216)
-.|--|++.|++ ++||-|++.++--
T Consensus 23 KsGF~V~i~GT~l~~vTD~nGYFEI~gvp~ 52 (96)
T d2b59b2 23 KAGFKVEIVGTELYAVTDANGYFEITGVPA 52 (96)
T ss_dssp HSCCEEEETTSSCEEECCTTSEEEEEEECC
T ss_pred hcCcEEEEEeeEeEEEeccCceEEEecCcC
Confidence 368889999987 4799999999753
Done!