Query psy8639
Match_columns 570
No_of_seqs 245 out of 2101
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 23:59:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2v_A Cadherin-1; cell adhesi 100.0 3.3E-70 1.1E-74 592.1 52.7 439 63-566 7-470 (550)
2 3q2w_A Cadherin-2; cell adhesi 100.0 1.8E-70 6.2E-75 595.2 48.0 448 63-568 7-480 (559)
3 1l3w_A EP-cadherin, C-cadherin 100.0 1.3E-70 4.5E-75 594.2 43.0 446 56-566 6-475 (546)
4 1q55_A EP-cadherin, C-cadherin 100.0 4E-69 1.4E-73 609.1 42.4 440 62-566 161-624 (880)
5 3q2w_A Cadherin-2; cell adhesi 100.0 2.4E-66 8.2E-71 562.9 46.6 460 5-533 49-552 (559)
6 3q2v_A Cadherin-1; cell adhesi 100.0 1.5E-66 5.2E-71 563.4 43.8 453 6-533 50-542 (550)
7 1l3w_A EP-cadherin, C-cadherin 100.0 1.1E-66 3.8E-71 563.5 36.2 450 6-532 56-545 (546)
8 1q55_A EP-cadherin, C-cadherin 100.0 6.9E-65 2.4E-69 574.5 35.6 451 31-569 26-524 (880)
9 3ubh_A Neural-cadherin; cell a 100.0 4.2E-60 1.4E-64 496.5 49.5 389 72-524 8-418 (419)
10 3ubh_A Neural-cadherin; cell a 100.0 1.5E-52 5.1E-57 439.1 38.9 333 184-569 9-362 (419)
11 2a62_A Cadherin-8; extracellul 100.0 6.3E-50 2.2E-54 403.0 25.0 301 61-377 5-322 (322)
12 2a62_A Cadherin-8; extracellul 100.0 4.9E-48 1.7E-52 389.2 25.9 298 172-523 5-322 (322)
13 3ubf_A Neural-cadherin; cell a 100.0 1.7E-46 5.7E-51 378.7 34.9 291 184-529 4-316 (316)
14 3ubf_A Neural-cadherin; cell a 100.0 1E-45 3.4E-50 373.1 33.3 296 61-383 9-316 (316)
15 3mvs_A Cadherin-23, otocadheri 100.0 6.3E-37 2.1E-41 290.0 22.7 205 52-273 4-210 (210)
16 2a4e_A Cadherin-11; dimer, cal 100.0 2E-36 6.9E-41 286.6 25.5 206 59-275 4-215 (215)
17 2x2u_A Proto-oncogene tyrosine 100.0 4.2E-38 1.4E-42 304.8 10.6 215 55-277 2-245 (246)
18 3mvs_A Cadherin-23, otocadheri 100.0 5.9E-36 2E-40 283.3 22.6 205 162-383 3-210 (210)
19 2a4e_A Cadherin-11; dimer, cal 100.0 2.3E-35 7.7E-40 279.4 25.5 203 283-531 6-215 (215)
20 2x2u_A Proto-oncogene tyrosine 100.0 6.3E-37 2.1E-41 296.5 12.3 213 166-387 2-245 (246)
21 2qvi_A Cadherin-2; beta barrel 100.0 8E-34 2.7E-38 269.2 23.2 203 62-268 6-215 (215)
22 3qrb_A Cadherin-1; cell adhesi 100.0 2.6E-33 9E-38 265.9 23.3 198 62-268 6-213 (213)
23 3k5r_A Cadherin 13; mouse, str 100.0 1.3E-32 4.6E-37 262.0 24.7 199 62-268 7-218 (218)
24 3ppe_A Vascular endothelial ca 100.0 6.4E-32 2.2E-36 253.9 24.9 193 61-268 5-203 (203)
25 2qvi_A Cadherin-2; beta barrel 100.0 1.7E-32 5.9E-37 260.0 20.4 197 173-378 6-215 (215)
26 3lnd_A CDH6 protein, cadherin 100.0 5.5E-33 1.9E-37 262.3 16.2 196 62-268 6-207 (207)
27 3ppe_A Vascular endothelial ca 100.0 1.6E-31 5.6E-36 251.1 25.0 190 283-524 5-203 (203)
28 3qrb_A Cadherin-1; cell adhesi 100.0 5.6E-32 1.9E-36 256.7 22.0 194 283-524 5-213 (213)
29 3k5r_A Cadherin 13; mouse, str 100.0 3.8E-31 1.3E-35 251.9 22.2 195 172-378 6-218 (218)
30 3lnd_A CDH6 protein, cadherin 100.0 1.6E-31 5.6E-36 252.2 15.0 193 173-378 6-207 (207)
31 4apx_B Protocadherin-15, otoca 100.0 3.6E-29 1.2E-33 240.5 20.8 204 61-268 22-237 (242)
32 4apx_B Protocadherin-15, otoca 100.0 6.4E-27 2.2E-31 224.8 21.7 197 171-378 21-237 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 1.7E-24 5.7E-29 185.1 9.5 117 155-274 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 5.2E-24 1.8E-28 182.1 9.7 115 374-530 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 3.6E-22 1.2E-26 168.9 10.1 111 155-270 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 4.9E-22 1.7E-26 168.1 9.1 110 374-526 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.8 3.7E-20 1.3E-24 158.6 5.3 115 51-169 7-122 (123)
38 2yqg_A Desmoglein-2, HDGC; cad 99.8 1.1E-19 3.7E-24 155.7 7.3 115 160-278 5-122 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 2E-18 6.7E-23 144.9 9.4 104 58-167 4-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.7 1.4E-17 4.8E-22 139.6 9.9 100 171-276 6-110 (110)
41 1wyj_A Protocadherin beta 14; 99.7 6.4E-18 2.2E-22 144.7 2.8 107 58-175 10-123 (125)
42 1wyj_A Protocadherin beta 14; 99.7 1.6E-17 5.4E-22 142.3 3.2 107 389-542 11-124 (125)
43 1zvn_A Mn-cadherin; strand dim 99.6 5E-15 1.7E-19 121.0 12.2 92 171-268 5-99 (99)
44 3k6d_A T-cadherin; cell adhesi 99.6 3.3E-15 1.1E-19 122.4 10.8 92 61-159 5-99 (99)
45 1zvn_A Mn-cadherin; strand dim 99.6 3.3E-15 1.1E-19 122.1 10.7 91 283-378 6-99 (99)
46 1zxk_A Cadherin-8; strand dime 99.6 3.5E-15 1.2E-19 121.7 10.5 91 283-378 5-98 (98)
47 1zxk_A Cadherin-8; strand dime 99.6 8.3E-15 2.9E-19 119.5 11.6 91 172-268 5-98 (98)
48 2omz_B Epithelial-cadherin; le 99.6 1E-14 3.5E-19 120.8 10.9 97 58-160 6-105 (105)
49 3k6f_A T-cadherin; cell adhesi 99.6 1.5E-14 5.2E-19 118.7 11.8 91 62-159 7-100 (100)
50 3k6i_A T-cadherin; cell adhesi 99.6 2.2E-14 7.6E-19 117.5 12.2 90 63-159 7-99 (99)
51 3k6d_A T-cadherin; cell adhesi 99.5 1.8E-14 6.2E-19 118.0 9.5 89 283-378 5-99 (99)
52 3k6f_A T-cadherin; cell adhesi 99.5 5.2E-14 1.8E-18 115.5 10.4 88 284-378 7-100 (100)
53 2omz_B Epithelial-cadherin; le 99.5 5E-14 1.7E-18 116.6 10.3 91 173-269 10-105 (105)
54 3k6i_A T-cadherin; cell adhesi 99.5 8.4E-14 2.9E-18 114.1 11.3 88 284-378 6-99 (99)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.3 1.1E-12 3.8E-17 108.1 3.0 93 389-528 3-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.2 5.6E-12 1.9E-16 103.8 2.7 95 170-272 3-103 (103)
57 3pdd_A Glycoside hydrolase, fa 94.8 1.2 4.2E-05 40.0 16.1 30 495-524 151-180 (190)
58 3pdd_A Glycoside hydrolase, fa 93.4 3.4 0.00012 37.0 16.1 118 127-268 59-180 (190)
59 1op4_A Neural-cadherin; beta s 92.9 0.58 2E-05 40.5 9.3 79 52-141 32-110 (159)
60 3rb5_A Na/Ca exchange protein; 92.4 5.2 0.00018 38.6 16.7 130 270-410 6-147 (298)
61 3rb5_A Na/Ca exchange protein; 91.4 8 0.00027 37.3 16.7 145 161-320 6-164 (298)
62 2yhg_A SDE_182CT, cellulose-bi 90.8 1.4 4.6E-05 44.8 10.8 68 303-377 365-437 (437)
63 2kpn_A Bacillolysin; solution 88.8 1.6 5.3E-05 34.8 7.5 85 161-274 7-91 (103)
64 1op4_A Neural-cadherin; beta s 88.1 4.1 0.00014 35.1 10.3 80 381-510 31-111 (159)
65 2yrl_A KIAA1837 protein; PKD d 82.8 7.4 0.00025 30.8 8.9 32 235-271 67-98 (102)
66 2yrl_A KIAA1837 protein; PKD d 81.1 2.7 9.1E-05 33.4 5.6 32 495-527 67-98 (102)
67 2kpn_A Bacillolysin; solution 80.8 3.8 0.00013 32.6 6.3 47 484-531 46-92 (103)
68 3us9_A Sodium/calcium exchange 78.5 48 0.0016 31.7 20.6 38 283-322 17-54 (295)
69 2yhg_A SDE_182CT, cellulose-bi 74.9 16 0.00055 36.9 10.4 79 71-157 353-436 (437)
70 3ead_A Na/Ca exchange protein; 72.9 22 0.00076 29.6 9.4 46 272-322 3-48 (137)
71 1u2c_A Dystroglycan; IG-like d 70.4 15 0.00051 33.8 8.1 77 449-527 18-104 (246)
72 3pe9_A Fibronectin(III)-like m 70.0 37 0.0013 26.5 10.5 29 496-524 60-88 (98)
73 2y72_A Collagenase, collagenas 69.6 8.2 0.00028 29.3 5.4 32 491-523 53-84 (85)
74 3pe9_A Fibronectin(III)-like m 65.0 47 0.0016 25.9 9.9 70 72-158 17-87 (98)
75 3ead_A Na/Ca exchange protein; 61.0 70 0.0024 26.5 10.3 48 495-546 82-133 (137)
76 1u2c_A Dystroglycan; IG-like d 60.6 41 0.0014 30.9 9.0 54 323-381 46-104 (246)
77 2y72_A Collagenase, collagenas 59.2 17 0.00058 27.4 5.4 31 232-267 54-84 (85)
78 3gin_A Sodium/calcium exchange 55.2 38 0.0013 29.1 7.6 40 369-411 9-48 (160)
79 2e7m_A Protein KIAA0319; PKD d 38.3 30 0.001 27.7 3.8 39 480-524 67-105 (113)
80 3gin_A Sodium/calcium exchange 34.9 2.1E+02 0.0072 24.3 10.1 58 260-322 10-67 (160)
81 2c4x_A Endoglucanase, ctcel9D- 31.8 1.9E+02 0.0067 26.8 9.0 32 346-379 65-96 (260)
82 2c4x_A Endoglucanase, ctcel9D- 28.8 2.1E+02 0.0073 26.5 8.7 36 490-526 62-97 (260)
83 2ptt_B Natural killer cell rec 23.2 1.8E+02 0.0061 23.2 5.8 49 104-159 64-112 (112)
84 3ott_A Two-component system se 20.4 2E+02 0.007 31.0 8.1 70 300-377 678-747 (758)
No 1
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=3.3e-70 Score=592.09 Aligned_cols=439 Identities=27% Similarity=0.396 Sum_probs=398.5
Q ss_pred eeecCCCC--CCeEEEEEEEEcCCCCCCCceEEEEEEecCC-CCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEe
Q psy8639 63 NEIKEDVP--IGFTVGNVVSTDSTGRAGGGHVMYSLTSLSP-TDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALD 139 (570)
Q Consensus 63 ~~v~E~~~--~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~-~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D 139 (570)
++|+||.. .++.|+++.+ |.| .++.++|+|.+.+. .+..++|.|++.+|.|+++++||||+...|.|+|+|+|
T Consensus 7 ~~v~En~~~~~~~~v~~v~a-d~d---~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d 82 (550)
T 3q2v_A 7 ISCPENEKGEFPKNLVQIKS-NRD---KETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS 82 (550)
T ss_dssp EEEETTCCSSSSEEEEECEE-GGG---GTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred EEEeCCCCCCcCeEEEEEec-CCC---CCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEe
Confidence 47999984 6899999999 777 46889999954221 23457999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCC---CCceEEEEEEecCC---CC
Q psy8639 140 TSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDG---SNGELRYGLVRQYP---EG 213 (570)
Q Consensus 140 ~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g---~~~~~~y~l~~~~~---~~ 213 (570)
.+| +..+.+..|+|+|.|+|||+|.|....|.+.|.|++++|+.++++.|+|+|.| .|+.++|+|.++.+ ..
T Consensus 83 ~~~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~ 160 (550)
T 3q2v_A 83 SNG--EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHK 160 (550)
T ss_dssp TTS--CBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSS
T ss_pred CCC--CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcC
Confidence 776 55777889999999999999999999999999999999999999999999988 78999999998754 35
Q ss_pred CcEEEeCCCcEEEE-cccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCC
Q psy8639 214 NHFSVDHLTGTLTL-LQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTR 292 (570)
Q Consensus 214 ~~F~Id~~~G~i~~-~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~ 292 (570)
++|.|++.+|.|++ .++||||....|.|+|+|+|++++. ++++++|.|+|.|+|||+|+|.... |.+.|.|+ +
T Consensus 161 ~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~t~~v~I~V~DvNDn~P~F~~~~--y~~~V~En-~ 234 (550)
T 3q2v_A 161 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG---LSTTAKAVITVKDINDNAPVFNPST--YQGQVPEN-E 234 (550)
T ss_dssp CSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTS---CCCEEEEEEEEECCSCSCCEESSSE--EEEEEESS-C
T ss_pred CceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCC---eeEEEEEEEEecccCCCCCEEecce--eEEEEecC-C
Confidence 69999999999987 5789999999999999999987663 8899999999999999999998876 89999999 8
Q ss_pred CCeEEEEEEEEeCCCCCCe--EEEEEEEeCCCCCcEEEe----cCCCEEEEEeecCcccccceeEEEEEEEEEECC---c
Q psy8639 293 VGSHVTKMTAVDQDSGDNG--RVTYVISGGNEDARFHLD----HDKGILSLARVISEYDHQSKFRAVLNITASDHG---I 363 (570)
Q Consensus 293 ~g~~v~~v~a~D~D~~~~~--~i~ysi~~~~~~~~F~id----~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g---~ 363 (570)
.|+.++++.|+|+|.+.++ .++|+|.. +..++|.|+ ..+|.|++.+.|| ||....|.|+|.|+|++ .
T Consensus 235 ~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i~~~~~LD---~E~~~~y~l~V~a~D~~~~~~ 310 (550)
T 3q2v_A 235 VNARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGILKTAKGLD---FEAKQQYILHVRVENEEPFEG 310 (550)
T ss_dssp SSCCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEEEEESSCCC---TTTCSEEEEEEEEEESSCCCS
T ss_pred CCCEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEEEEecccCC---ccccceEEEEEEEEeCCCCCC
Confidence 9999999999999998876 46799988 578899998 6789999999999 99999999999999986 3
Q ss_pred CCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEee
Q psy8639 364 PPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVAR 443 (570)
Q Consensus 364 ~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 443 (570)
+.++++++|.|.|.|+|| +|.|....|...|.|++++|+.|+++.|+|+|.
T Consensus 311 ~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~---------------------------- 361 (550)
T 3q2v_A 311 SLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDT---------------------------- 361 (550)
T ss_dssp SCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCC----------------------------
T ss_pred CccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCC----------------------------
Confidence 457899999999999999 999999999999999999999999999999999
Q ss_pred CCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEcccCCcccc-----ceEEEEEEEEeCCC-CCeeEEE
Q psy8639 444 SPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLARSLDRETV-----DQYNLVVHVTDSKS-GDYDTTN 517 (570)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~-----~~~~l~V~atD~~~-~~~~~~~ 517 (570)
+.++.++|+|.++ ..++|.|++.+|.|++.+.||||.. ..|.|+|.|+|++. +++++++
T Consensus 362 --------------g~n~~i~y~i~~~-~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~ 426 (550)
T 3q2v_A 362 --------------FMDQKITYRIWRD-TANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGT 426 (550)
T ss_dssp --------------STTCCCEEEEEEC-TTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEEE
T ss_pred --------------CCCCCEEEEEecC-CCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcceeEEE
Confidence 8899999999654 5689999999999999999999998 99999999999997 5889999
Q ss_pred EEEEEEecCCCCcccccCCeeeEEecCCCCCCeEEEEEEEeCCCCCcce
Q psy8639 518 VFITILDVNDNAPEFKSGSCYPITIPENSEAANVHTFIATDFGNFHKSF 566 (570)
Q Consensus 518 v~I~V~dvNd~~P~f~~~~~~~~~v~E~~~~~~v~~i~a~D~D~~~~~~ 566 (570)
|+|+|+|+|||+|.|. .+...|+|+.+.+.+ ++|+|+|.+.|+-
T Consensus 427 v~I~V~DvNDn~P~~~---~~~~~v~e~~~~~~~--v~A~D~D~~~n~~ 470 (550)
T 3q2v_A 427 LLLVLLDVNDNAPIPE---PRNMQFCQRNPQPHI--ITILDPDLPPNTS 470 (550)
T ss_dssp EEEEEECCCCCCCEES---CSSCEEESSSCCCEE--EEEECCSCTTSSS
T ss_pred EEEEEEeCCCCCCcCc---CcccceeecCCCcEE--EEEECCCCCCCCC
Confidence 9999999999999998 377889999988865 9999999999874
No 2
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.8e-70 Score=595.22 Aligned_cols=448 Identities=28% Similarity=0.394 Sum_probs=397.8
Q ss_pred eeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCC-CCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEeCC
Q psy8639 63 NEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSP-TDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALDTS 141 (570)
Q Consensus 63 ~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~-~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D~~ 141 (570)
++|+||.+ |+....+.+.+.|.+ .++.++|+|.+... ....++|.|++.+|.|++.++||||+...|.|+|+|+|.+
T Consensus 7 ~~v~En~~-g~~~~~i~~~~~D~~-~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g 84 (559)
T 3q2w_A 7 INLPENSR-GPFPQELVRIRSDRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (559)
T ss_dssp EEEESSCC-CCSSEEEEECCCGGG-GTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred EEeeCCCC-CCCCeEEEEEeeCCC-CCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECC
Confidence 47999997 666666777777766 68899999954221 1234799999999999999999999999999999999976
Q ss_pred CCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCC--CCceEEEEEEecCCC---CCcE
Q psy8639 142 TSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDG--SNGELRYGLVRQYPE---GNHF 216 (570)
Q Consensus 142 g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g--~~~~~~y~l~~~~~~---~~~F 216 (570)
+ +.++.+..|+|+|.|+|||+|.|....|.+.|.|+++.|+.++++.|+|+|.| .|+.++|+|.++.+. .+.|
T Consensus 85 ~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F 162 (559)
T 3q2w_A 85 G--NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMF 162 (559)
T ss_dssp S--CEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCE
T ss_pred C--CccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceE
Confidence 6 56888899999999999999999999999999999999999999999999976 689999999886542 2689
Q ss_pred EEeCCCcEEEEcc-cCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCe
Q psy8639 217 SVDHLTGTLTLLQ-PLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGS 295 (570)
Q Consensus 217 ~Id~~~G~i~~~~-~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~ 295 (570)
.|++.+|.|.+.+ .||||....|.|+|+|+|+++.+.+.++++++|.|+|.|+|||+|.|.... |.+.|.|+. +|+
T Consensus 163 ~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~--y~~~V~En~-~g~ 239 (559)
T 3q2w_A 163 TINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMT--FYGEVPENR-VDV 239 (559)
T ss_dssp EECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSE--EEEEEESSC-SSE
T ss_pred EEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCcccccc--ceeEecCCC-CCc
Confidence 9999999999988 999999999999999999865332237899999999999999999998886 889999997 899
Q ss_pred EEEEEEEEeCCCCC--CeEEEEEEEeCCCCCcEEE----ecCCCEEEEEeecCcccccceeEEEEEEEEEECC------c
Q psy8639 296 HVTKMTAVDQDSGD--NGRVTYVISGGNEDARFHL----DHDKGILSLARVISEYDHQSKFRAVLNITASDHG------I 363 (570)
Q Consensus 296 ~v~~v~a~D~D~~~--~~~i~ysi~~~~~~~~F~i----d~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g------~ 363 (570)
.++++.|+|+|.+. ++.++|+|..++..++|.| +..+|.|++.++|| ||....|.|+|.|+|++ .
T Consensus 240 ~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD---~E~~~~y~l~V~A~D~~~~~~g~~ 316 (559)
T 3q2w_A 240 IVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPID---FETNRMFVLTVAAENQVPLAKGIQ 316 (559)
T ss_dssp EEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCC---TTTCSEEEEEEECCBSSCCCTTCC
T ss_pred EEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCC---CccCceEEEEEEEEcCCccccCCC
Confidence 99999999999976 5689999999888899999 46789999999999 99999999999999964 3
Q ss_pred CCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEee
Q psy8639 364 PPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVAR 443 (570)
Q Consensus 364 ~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 443 (570)
|+++++++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.
T Consensus 317 ~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~---------------------------- 367 (559)
T 3q2w_A 317 HPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDR---------------------------- 367 (559)
T ss_dssp CCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCS----------------------------
T ss_pred CCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCC----------------------------
Confidence 568899999999999999 699999999999999999999999999999999
Q ss_pred CCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEcccCCcccc----ceEEEEEEEEeCCC-CCeeEEEE
Q psy8639 444 SPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLARSLDRETV----DQYNLVVHVTDSKS-GDYDTTNV 518 (570)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~----~~~~l~V~atD~~~-~~~~~~~v 518 (570)
+.++.++|+|.++ ..++|+|++.+|.|++.+.||||.. ..|.|+|+|+|++. +++++++|
T Consensus 368 --------------g~n~~i~Ysi~~~-~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v 432 (559)
T 3q2w_A 368 --------------YMQQNIRYTKLSD-PANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTL 432 (559)
T ss_dssp --------------SSCCCEEEEEEEC-TTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCCEEEEEE
T ss_pred --------------CCCCceEEEEccC-CccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcceEEEEE
Confidence 8899999999865 4689999999999999999999986 99999999999997 58999999
Q ss_pred EEEEEecCCCCcccccCCeeeEEecCCCCCCeEEEEEEEeCCCCCcc--eec
Q psy8639 519 FITILDVNDNAPEFKSGSCYPITIPENSEAANVHTFIATDFGNFHKS--FID 568 (570)
Q Consensus 519 ~I~V~dvNd~~P~f~~~~~~~~~v~E~~~~~~v~~i~a~D~D~~~~~--~~~ 568 (570)
+|+|+|+|||+|.|. .. ...++|+ +.+.+++++|+|+|.|.|+ +.|
T Consensus 433 ~I~V~DvNDn~P~f~-~~--~~~v~e~-~~~~v~~v~A~D~D~~~n~~~~~y 480 (559)
T 3q2w_A 433 QIYLLDINDNAPQVL-PQ--EAETCET-PEPNSINITALDYDIDPNAGPFAF 480 (559)
T ss_dssp EEEEECCSCCCCEES-CT--TCCCCSC-CCTTCEEECEECSCCTTSSSSCEE
T ss_pred EEEEEEccCCCCccc-CC--ceEEeec-CCCcEEEEEEEcCCCCCCCCCEEE
Confidence 999999999999998 44 3458888 4335679999999998887 444
No 3
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.3e-70 Score=594.21 Aligned_cols=446 Identities=28% Similarity=0.430 Sum_probs=400.2
Q ss_pred ccccccceeecCCCC--CCeEEEEEEEEcCCCCCCCceEEEEEEecCCC-CCCCceEEECcccEEEECCcCCCCCCCeEE
Q psy8639 56 FKKYLSNNEIKEDVP--IGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPT-DHSGAFDIDKSSGSLVVARQLDRETCPEYK 132 (570)
Q Consensus 56 f~~~~~~~~v~E~~~--~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~-~~~~~F~id~~~G~l~~~~~LD~E~~~~~~ 132 (570)
..+-.|.++|+||.+ .+..++++.+ |.| .++.++|+|.+.... ...+.|.|++.+|.|+++++||||+...|.
T Consensus 6 ~~~~~~~~~v~En~~g~~~~~v~~~~~-d~d---~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~ 81 (546)
T 1l3w_A 6 HDWVIPPIKVSENERGPFPKRLVQIKS-NKD---RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYV 81 (546)
T ss_dssp -CCCCCCEEEESSCCSSSCEEEEECCC-SGG---GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEE
T ss_pred CCcccceeEecCCCCCCCCcEEEEEEc-CCC---CCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEE
Confidence 445567889999997 3455777764 555 578999999543211 235789999999999999999999999999
Q ss_pred EEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCC---CCceEEEEEEec
Q psy8639 133 LEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDG---SNGELRYGLVRQ 209 (570)
Q Consensus 133 l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g---~~~~~~y~l~~~ 209 (570)
|+|+|+|.++ +.++.+..|+|.|.|+|||+|.|....|.+.|.|++++|+.++++.|+|+|.| .|+.++|+|..+
T Consensus 82 l~v~A~D~~~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~ 159 (546)
T 1l3w_A 82 LSSHAVSENG--SPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQ 159 (546)
T ss_dssp EEEEEEESSS--CBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEE
T ss_pred EEEEEEeCCC--CcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCC
Confidence 9999999776 56778889999999999999999999999999999999999999999999988 689999999987
Q ss_pred CC---CCCcEEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeE
Q psy8639 210 YP---EGNHFSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLI 285 (570)
Q Consensus 210 ~~---~~~~F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~ 285 (570)
.+ ..++|.|++.+|.|++. ++||||....|.|+|+|+|++++. ++++++|.|+|.|+|||+|.|.... |.+
T Consensus 160 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P~F~~~~--y~~ 234 (546)
T 1l3w_A 160 DPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAPIFDPKT--YTA 234 (546)
T ss_dssp SSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCCCBSCSE--EEE
T ss_pred CCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCC---cceEEEEEEEEeecCCCCCcccccc--ceE
Confidence 64 35799999999999985 789999999999999999998753 7899999999999999999998876 889
Q ss_pred EEeccCCCCeEEEEEEEEeCC--CCCCeEEEEEEEeCCCCCcEEEe----cCCCEEEEEeecCcccccceeEEEEEEEEE
Q psy8639 286 YVSEQTRVGSHVTKMTAVDQD--SGDNGRVTYVISGGNEDARFHLD----HDKGILSLARVISEYDHQSKFRAVLNITAS 359 (570)
Q Consensus 286 ~v~E~~~~g~~v~~v~a~D~D--~~~~~~i~ysi~~~~~~~~F~id----~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~ 359 (570)
.|.|+ +.|+.++++.|+|+| .+.++.++|+|.. +..++|.|+ ..+|.|++.+.|| ||....|.|+|+|+
T Consensus 235 ~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i~~~~~LD---~E~~~~y~l~V~a~ 309 (546)
T 1l3w_A 235 LVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLD---FELRKQYVLQITVE 309 (546)
T ss_dssp EEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCC---CSSCCCEEEEECCE
T ss_pred EEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEEEEECccCC---cccccEEEEEEEEE
Confidence 99999 999999999999999 7789999999998 678899996 2579999999999 99999999999999
Q ss_pred ECC---cCCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceE
Q psy8639 360 DHG---IPPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTY 436 (570)
Q Consensus 360 D~g---~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~ 436 (570)
|++ .|.++++++|.|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.
T Consensus 310 D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~--------------------- 367 (546)
T 1l3w_A 310 NAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDK--------------------- 367 (546)
T ss_dssp ESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCT---------------------
T ss_pred ECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCC---------------------
Confidence 976 3567899999999999999 999999999999999999999999999999999
Q ss_pred EEEEEeeCCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEcccCCcccc----ceEEEEEEEEeCCC-C
Q psy8639 437 IIKVVARSPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLARSLDRETV----DQYNLVVHVTDSKS-G 511 (570)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~----~~~~l~V~atD~~~-~ 511 (570)
+.++.++|+|..+ ..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|++. +
T Consensus 368 ---------------------g~n~~i~ysi~~~-~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~ 425 (546)
T 1l3w_A 368 ---------------------QQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV 425 (546)
T ss_dssp ---------------------TCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSC
T ss_pred ---------------------CCCceEEEEECCC-CCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCC
Confidence 8899999999765 4689999999999999999999997 89999999999987 6
Q ss_pred CeeEEEEEEEEEecCCCCcccccCCeeeEEecCCCCCCeEEEEEEEeCCCCCcce
Q psy8639 512 DYDTTNVFITILDVNDNAPEFKSGSCYPITIPENSEAANVHTFIATDFGNFHKSF 566 (570)
Q Consensus 512 ~~~~~~v~I~V~dvNd~~P~f~~~~~~~~~v~E~~~~~~v~~i~a~D~D~~~~~~ 566 (570)
++++++|+|+|+|+|||+|.|. . +...|+|+.+.|.+ +.|+|+|.+.|+.
T Consensus 426 ~s~~~~v~I~V~DvNDn~P~f~-~--~~~~v~e~~~~g~v--v~A~D~D~~~n~~ 475 (546)
T 1l3w_A 426 GTGTGTLILHVLDVNDNGPVPS-P--RVFTMCDQNPEPQV--LTISDADIPPNTY 475 (546)
T ss_dssp CCCCEEEECCBCCCCCSCCCBS-C--CCEEECSSSCCCEE--EEBCCSSCTTTTC
T ss_pred cEeEEEEEEEEEECCCCcCCcc-C--ceEEEecCCCCCeE--EEEEeCCCCCCCc
Confidence 8899999999999999999998 3 37889999999975 9999999999873
No 4
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=4e-69 Score=609.09 Aligned_cols=440 Identities=28% Similarity=0.436 Sum_probs=398.0
Q ss_pred ceeecCCCC--CCeEEEEEEEEcCCCCCCCceEEEEEEecCCC-CCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 62 NNEIKEDVP--IGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPT-DHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 62 ~~~v~E~~~--~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~-~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
.++|+||.+ .+..++++.+ |.| .++.++|+|.+.... ...+.|.|++.+|.|+++++||||+...|.|+|+|+
T Consensus 161 ~~~v~En~~~~~~~~v~~v~~-d~d---~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~ 236 (880)
T 1q55_A 161 PIKVSENERGPFPKRLVQIKS-NKD---RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAV 236 (880)
T ss_dssp CEEEESSCCSSSCEEEEECCC-SGG---GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred ceEEeCCCCCCCCeEEEEEee-CCC---CCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEE
Confidence 679999997 5778888765 444 478999999653211 235789999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCC---CCceEEEEEEecCC---C
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDG---SNGELRYGLVRQYP---E 212 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g---~~~~~~y~l~~~~~---~ 212 (570)
|.++ +..+.+..|+|+|.|+|||+|+|....|.+.|.|++++|+.++++.|+|+|.| .|+.++|+|.++.+ .
T Consensus 237 D~g~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~ 314 (880)
T 1q55_A 237 SENG--SPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPI 314 (880)
T ss_dssp ESSS--CBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSC
T ss_pred ECCC--CceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCccc
Confidence 9766 56778899999999999999999999999999999999999999999999988 68999999998764 3
Q ss_pred CCcEEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccC
Q psy8639 213 GNHFSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQT 291 (570)
Q Consensus 213 ~~~F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~ 291 (570)
.+.|.|++.+|.|++. +.||||....|.|+|+|+|.+++. ++++++|.|+|.|+|||+|+|.... |.+.|.|+
T Consensus 315 ~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P~F~~~~--y~~~V~En- 388 (880)
T 1q55_A 315 PNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAPIFDPKT--YTALVPEN- 388 (880)
T ss_dssp SCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCCCBSCSE--EEEEEESS-
T ss_pred CCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCC---ccceeEEEEEEEeccCCCCCccccc--eEEEeecC-
Confidence 5799999999999985 789999999999999999998753 7899999999999999999998876 88999999
Q ss_pred CCCeEEEEEEEEeCC--CCCCeEEEEEEEeCCCCCcEEEe--c--CCCEEEEEeecCcccccceeEEEEEEEEEECC---
Q psy8639 292 RVGSHVTKMTAVDQD--SGDNGRVTYVISGGNEDARFHLD--H--DKGILSLARVISEYDHQSKFRAVLNITASDHG--- 362 (570)
Q Consensus 292 ~~g~~v~~v~a~D~D--~~~~~~i~ysi~~~~~~~~F~id--~--~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g--- 362 (570)
++|+.++++.|+|+| .+.|+.++|+|.. +..++|.|+ + .+|.|++.+.|| ||....|.|+|+|+|++
T Consensus 389 ~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~i~~~~~LD---~E~~~~y~l~V~A~D~~~~~ 464 (880)
T 1q55_A 389 EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLD---FELRKQYVLQITVENAEPFS 464 (880)
T ss_dssp SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCC---CSSCCCEEEEECCEESSCCS
T ss_pred CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCCCceEEEecccCCC---cccCCcEEEEEEEEECCCCC
Confidence 999999999999999 6788999999998 678899995 2 579999999999 99999999999999976
Q ss_pred cCCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEe
Q psy8639 363 IPPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVA 442 (570)
Q Consensus 363 ~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 442 (570)
.|.++++++|+|+|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.
T Consensus 465 ~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~--------------------------- 516 (880)
T 1q55_A 465 VPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDK--------------------------- 516 (880)
T ss_dssp SCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCT---------------------------
T ss_pred CCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCC---------------------------
Confidence 3467899999999999999 999999999999999999999999999999999
Q ss_pred eCCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEcccCCcccc----ceEEEEEEEEeCCC-CCeeEEE
Q psy8639 443 RSPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLARSLDRETV----DQYNLVVHVTDSKS-GDYDTTN 517 (570)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~----~~~~l~V~atD~~~-~~~~~~~ 517 (570)
+.++.++|+|..+ ..++|.|++.+|.|++.+.||||.. ..|.|+|.|+|++. +++++++
T Consensus 517 ---------------g~n~~v~Ysi~~~-~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~sst~t 580 (880)
T 1q55_A 517 ---------------QQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGT 580 (880)
T ss_dssp ---------------TCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEE
T ss_pred ---------------CCCCcEEEEECCC-CCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECCCCCcEeEEE
Confidence 8899999999765 4689999999999999999999997 89999999999987 6889999
Q ss_pred EEEEEEecCCCCcccccCCeeeEEecCCCCCCeEEEEEEEeCCCCCcce
Q psy8639 518 VFITILDVNDNAPEFKSGSCYPITIPENSEAANVHTFIATDFGNFHKSF 566 (570)
Q Consensus 518 v~I~V~dvNd~~P~f~~~~~~~~~v~E~~~~~~v~~i~a~D~D~~~~~~ 566 (570)
|+|+|.|+|||+|.|. . ....|+|+.+.|.+ +.|+|+|.+.|+.
T Consensus 581 v~I~V~DvNDn~P~f~-~--~~~~v~E~~~~g~v--v~A~D~D~~~n~~ 624 (880)
T 1q55_A 581 LILHVLDVNDNGPVPS-P--RVFTMCDQNPEPQV--LTISDADIPPNTY 624 (880)
T ss_dssp EECCBCCCCCSCCCBS-C--CCEEECSSSCCCEE--EEBCCSSCTTTTC
T ss_pred EEEEEEeCCCCCCCcc-C--cceEEecCCCCCeE--EEEecCCCCCCCc
Confidence 9999999999999998 3 37889999999965 9999999999874
No 5
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2.4e-66 Score=562.89 Aligned_cols=460 Identities=22% Similarity=0.309 Sum_probs=387.3
Q ss_pred eeeeeeeccCceEEeCC---------------------CceeEEEEE-EEEEccCCCCcEEEEecCCCcccccccccccc
Q psy8639 5 CKFKKYLSNNEIFTSTP---------------------NMVSRCKFK-KYLSNNEVCPKQIFTSTPNMVSRCKFKKYLSN 62 (570)
Q Consensus 5 ~~~~~~~~~~~~~~~~p---------------------~~~~~~~~~-~v~d~nd~~p~~~~~~~~~~~~~p~f~~~~~~ 62 (570)
..|.|+.++|+|++..+ .+++.+.+. .|+|+|||+| .|.+..|.
T Consensus 49 ~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P--------------~F~~~~y~ 114 (559)
T 3q2w_A 49 GIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRP--------------EFLHQVWN 114 (559)
T ss_dssp TSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCC--------------EESCSEEE
T ss_pred ceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCC--------------ccCCCeeE
Confidence 35777777777766554 233445554 7777777777 58888999
Q ss_pred eeecCCCCCCeEEEEEEEEcCCCCC-CCceEEEEEEecCCC-CCCCceEEECcccEEEECC-cCCCCCCCeEEEEEEEEe
Q psy8639 63 NEIKEDVPIGFTVGNVVSTDSTGRA-GGGHVMYSLTSLSPT-DHSGAFDIDKSSGSLVVAR-QLDRETCPEYKLEVRALD 139 (570)
Q Consensus 63 ~~v~E~~~~gt~v~~l~a~D~D~~~-~~~~~~ysi~~~~~~-~~~~~F~id~~~G~l~~~~-~LD~E~~~~~~l~v~a~D 139 (570)
++|+|++++|+.|+++.|+|+|.+. .|+.++|+|.+..+. ...+.|.|++.+|.|++.+ .||||....|.|+|+|+|
T Consensus 115 ~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D 194 (559)
T 3q2w_A 115 GSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATD 194 (559)
T ss_dssp EEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEH
T ss_pred EEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEE
Confidence 9999999999999999999999762 478999999543221 1237899999999999887 999999999999999999
Q ss_pred CCCCC-CCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCC--CceEEEEEEecCCCCCcE
Q psy8639 140 TSTSS-NPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGS--NGELRYGLVRQYPEGNHF 216 (570)
Q Consensus 140 ~~g~~-~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~--~~~~~y~l~~~~~~~~~F 216 (570)
++|.+ +.+++++.|+|+|.|+|||+|.|....|.+.|.|+. +|+.++++.|+|+|.+. ++.++|+|..+.+ .+.|
T Consensus 195 ~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~-~~~F 272 (559)
T 3q2w_A 195 MEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDP-TGRF 272 (559)
T ss_dssp HHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCT-TCCE
T ss_pred CCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCC-CCce
Confidence 75532 358999999999999999999999999999999997 89999999999999875 6689999988754 6799
Q ss_pred EE----eCCCcEEEEcccCCccCcceEEEEEEEEECCCCC---CCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEec
Q psy8639 217 SV----DHLTGTLTLLQPLDYETLTSFILVVKVTDQAANI---SERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSE 289 (570)
Q Consensus 217 ~I----d~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~---~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E 289 (570)
.| +..+|.|++.++||||....|.|+|.|+|+++.. .+.++++++|.|+|.|+|| +|.|.... |.+.|.|
T Consensus 273 ~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~--~~~~v~E 349 (559)
T 3q2w_A 273 AILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNP--KIIRQEE 349 (559)
T ss_dssp EEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSE--EEEEEES
T ss_pred EEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccc--eEEEEeC
Confidence 99 4678999999999999999999999999985421 1237899999999999999 79998776 7899999
Q ss_pred cCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccce----eEEEEEEEEEECCcCC
Q psy8639 290 QTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSK----FRAVLNITASDHGIPP 365 (570)
Q Consensus 290 ~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~----~~~~l~V~a~D~g~~~ 365 (570)
+.+.|+.++++.|+|+|.+.++.++|+|..+ ..++|.|++.+|.|++.+.|| ||.. ..|.|+|.|+|+|.|+
T Consensus 350 n~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~-~~~~f~Id~~tG~i~~~~~lD---rE~~~~~~~~y~l~V~A~D~g~p~ 425 (559)
T 3q2w_A 350 GLHAGTMLTTLTAQDPDRYMQQNIRYTKLSD-PANWLKIDPVNGQITTIAVLD---RESPNVKNNIYNATFLASDNGIPP 425 (559)
T ss_dssp CCCTTCEEEECCEECSCSSSCCCEEEEEEEC-TTCCEEECTTTCEEEESSCCC---SSSTTSCSSEEEEEEEEEECSSSC
T ss_pred CCCCCCEEEEEEEECCCCCCCCceEEEEccC-CccceEecCCceEEEEccccC---cccccccCCEEEEEEEEEcCCCCc
Confidence 9999999999999999999999999999975 678999999999999999999 8875 8999999999999999
Q ss_pred ceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCC
Q psy8639 366 KSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSP 445 (570)
Q Consensus 366 ~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 445 (570)
++++++|+|.|.|+|||+|.|.... ..++|+ .+..+++|.|+|+|.
T Consensus 426 ~ss~~~v~I~V~DvNDn~P~f~~~~--~~v~e~--~~~~v~~v~A~D~D~------------------------------ 471 (559)
T 3q2w_A 426 MSGTGTLQIYLLDINDNAPQVLPQE--AETCET--PEPNSINITALDYDI------------------------------ 471 (559)
T ss_dssp CEEEEEEEEEEECCSCCCCEESCTT--CCCCSC--CCTTCEEECEECSCC------------------------------
T ss_pred ceEEEEEEEEEEEccCCCCcccCCc--eEEeec--CCCcEEEEEEEcCCC------------------------------
Confidence 9999999999999999999998654 467888 455578999999999
Q ss_pred CceeEEEEEeecCCCc-eEEEEecCCC--CCCcEEEeCCCcEEEEc-ccCCccccceEEEEEEEEeCCC-CCeeEEEEEE
Q psy8639 446 STYVYHMYLISDFSGY-NLTYMIPAGV--ADDMFKIDAETGVVTLA-RSLDRETVDQYNLVVHVTDSKS-GDYDTTNVFI 520 (570)
Q Consensus 446 ~~~~~~~~~~~~~~~~-~~~y~i~~~~--~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~l~V~atD~~~-~~~~~~~v~I 520 (570)
+.++ .++|+|.... ..+.|+|+..+|.+.+. ..++++....|.|.|+|+|+++ +++++++|+|
T Consensus 472 ------------~~n~~~~~ysl~~~~~~~~~~f~i~~~~G~~~~~~~~~~~~~~~~~~l~V~~~D~g~P~lsst~tv~V 539 (559)
T 3q2w_A 472 ------------DPNAGPFAFDLPLSPVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRV 539 (559)
T ss_dssp ------------TTSSSSCEEECCSSSHHHHHHEEEEECSSSCEEEEECSCC-CCEEEEEEEEEECSSSSCCEEEEEEEE
T ss_pred ------------CCCCCCEEEEEcCCCCccCCCeEEEecCCCEEEEEeccCcccCcEEEEEEEEEECCCCccceeEEEEE
Confidence 7776 7999997542 35789999999987554 4789999999999999999998 5899999999
Q ss_pred EEEecCCCCcccc
Q psy8639 521 TILDVNDNAPEFK 533 (570)
Q Consensus 521 ~V~dvNd~~P~f~ 533 (570)
.|+||||+...+.
T Consensus 540 ~V~d~n~~~~~~~ 552 (559)
T 3q2w_A 540 KVCQCDSNGDCTD 552 (559)
T ss_dssp EEC----------
T ss_pred EEEeCCCCCcccc
Confidence 9999999776665
No 6
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.5e-66 Score=563.41 Aligned_cols=453 Identities=20% Similarity=0.292 Sum_probs=384.8
Q ss_pred eeeeeeccCceEEeCCC---------------------ceeEEEEE-EEEEccCCCCcEEEEecCCCcccccccccccce
Q psy8639 6 KFKKYLSNNEIFTSTPN---------------------MVSRCKFK-KYLSNNEVCPKQIFTSTPNMVSRCKFKKYLSNN 63 (570)
Q Consensus 6 ~~~~~~~~~~~~~~~p~---------------------~~~~~~~~-~v~d~nd~~p~~~~~~~~~~~~~p~f~~~~~~~ 63 (570)
.|.|+..+|+|++..+- +++.+.+. .|+|+|||+| .|.+..|.+
T Consensus 50 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P--------------~F~~~~y~~ 115 (550)
T 3q2v_A 50 VFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRP--------------EFTQEVFEG 115 (550)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCC--------------CBSCSEEEE
T ss_pred eEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCC--------------ccCCCceEE
Confidence 57787777777765543 22333443 6666666666 688999999
Q ss_pred eecCCCCCCeEEEEEEEEcCCCCC--CCceEEEEEEecCCC-CCCCceEEECcccEEEE-CCcCCCCCCCeEEEEEEEEe
Q psy8639 64 EIKEDVPIGFTVGNVVSTDSTGRA--GGGHVMYSLTSLSPT-DHSGAFDIDKSSGSLVV-ARQLDRETCPEYKLEVRALD 139 (570)
Q Consensus 64 ~v~E~~~~gt~v~~l~a~D~D~~~--~~~~~~ysi~~~~~~-~~~~~F~id~~~G~l~~-~~~LD~E~~~~~~l~v~a~D 139 (570)
+|+|++++|+.++++.|+|+|.+. .|+.++|+|.+..+. ...+.|.|++.+|.|++ .++||||....|.|+|+|+|
T Consensus 116 ~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D 195 (550)
T 3q2v_A 116 SVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195 (550)
T ss_dssp EEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEES
T ss_pred EEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEc
Confidence 999999999999999999999761 478999999543221 24679999999999987 57999999999999999999
Q ss_pred CCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCc--eEEEEEEecCCCCCcEE
Q psy8639 140 TSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNG--ELRYGLVRQYPEGNHFS 217 (570)
Q Consensus 140 ~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~--~~~y~l~~~~~~~~~F~ 217 (570)
.++ +.+++++.|+|+|.|+|||+|+|....|.+.|.|+ +.|+.++++.|+|+|.+.++ .++|+|.. ...+.|.
T Consensus 196 ~g~--~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~--~~~~~F~ 270 (550)
T 3q2v_A 196 LQG--EGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN--DPDQQFV 270 (550)
T ss_dssp GGG--TSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS--CSSCCEE
T ss_pred CCC--CCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe--CCCCcEE
Confidence 766 57899999999999999999999999999999999 89999999999999988776 46799987 3468999
Q ss_pred Ee----CCCcEEEEcccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCC
Q psy8639 218 VD----HLTGTLTLLQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRV 293 (570)
Q Consensus 218 Id----~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~ 293 (570)
|+ ..+|.|++.++||||....|.|+|.|+|+++...+.++++++|.|+|.|+|| +|.|.... |.+.|.|++++
T Consensus 271 i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~--~~~~v~E~~~~ 347 (550)
T 3q2v_A 271 VVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAE--RRVEVPEDFGV 347 (550)
T ss_dssp EEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSS--CEEEEETTCCS
T ss_pred EEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcc--eEEEEecCCCC
Confidence 98 6789999999999999999999999999875433347889999999999999 99998876 78999999999
Q ss_pred CeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccce-----eEEEEEEEEEECCcCCcee
Q psy8639 294 GSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSK-----FRAVLNITASDHGIPPKSS 368 (570)
Q Consensus 294 g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~-----~~~~l~V~a~D~g~~~~s~ 368 (570)
|+.++++.|+|+|.|.++.++|+|... ..++|.|++.+|.|++.+.|| ||.. ..|.|+|.|+|+|.|++++
T Consensus 348 gt~v~~v~A~D~D~g~n~~i~y~i~~~-~~~~f~id~~tG~i~~~~~lD---rE~~~~~~~~~y~l~V~A~D~g~p~~s~ 423 (550)
T 3q2v_A 348 GQEITSYTAREPDTFMDQKITYRIWRD-TANWLEINPETGAIFTRAEMD---REDAEHVKNSTYVALIIATDDGSPIATG 423 (550)
T ss_dssp SCEEEECCEECCCCSTTCCCEEEEEEC-TTCCEEECTTTCEEEECSCCC---TTCTTTCCSSEEEEEEEEECCSSSCCCE
T ss_pred CCEEEEEeCCCCCCCCCCCEEEEEecC-CCCcEEEeCCCcEEEECCccC---cccccccCCCEEEEEEEEEeCCCCccee
Confidence 999999999999999999999999765 678999999999999999999 9987 9999999999999999999
Q ss_pred EEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCce
Q psy8639 369 SLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTY 448 (570)
Q Consensus 369 ~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 448 (570)
+++|.|.|.|+|||+|.|.. +...++|+.+.|.. |.|+|+|.
T Consensus 424 ~~~v~I~V~DvNDn~P~~~~--~~~~v~e~~~~~~~---v~A~D~D~--------------------------------- 465 (550)
T 3q2v_A 424 TGTLLLVLLDVNDNAPIPEP--RNMQFCQRNPQPHI---ITILDPDL--------------------------------- 465 (550)
T ss_dssp EEEEEEEEECCCCCCCEESC--SSCEEESSSCCCEE---EEEECCSC---------------------------------
T ss_pred EEEEEEEEEeCCCCCCcCcC--cccceeecCCCcEE---EEEECCCC---------------------------------
Confidence 99999999999999999984 56789999988854 89999999
Q ss_pred eEEEEEeecCCCc-eEEEEecCCCCCCcEEEe--CCCcEEEEcccCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEec
Q psy8639 449 VYHMYLISDFSGY-NLTYMIPAGVADDMFKID--AETGVVTLARSLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILDV 525 (570)
Q Consensus 449 ~~~~~~~~~~~~~-~~~y~i~~~~~~~~F~Id--~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~dv 525 (570)
+.++ .++|++..+.. ..|.+. ..+|.+...+.+++|..+.|.|.|+|+|+++ +++..+|+|.|+|+
T Consensus 466 ---------~~n~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~y~l~V~a~D~g~-lss~~tv~V~V~d~ 534 (550)
T 3q2v_A 466 ---------PPNTSPFTAELTHGAS-VNWTIEYNDAAQESLILQPRKDLEIGEYKIHLKLADNQN-KDQVTTLDVHVCDC 534 (550)
T ss_dssp ---------TTSSSSCCCEEEECCS-SSCEEECCSTTSSEEEEECSCC----CEECEEECCSSSC-CCCBCCCEEEEECC
T ss_pred ---------CCCCCCEEEEECCCCC-CCeEEEEecCCCcEEEEEecccCCCceEEEEEEEEECCc-ceeEEEEEEEEEEe
Confidence 6666 58888877643 355554 4448888888899999999999999999995 88999999999999
Q ss_pred CCCCcccc
Q psy8639 526 NDNAPEFK 533 (570)
Q Consensus 526 Nd~~P~f~ 533 (570)
|||+|.+.
T Consensus 535 ndn~~~~~ 542 (550)
T 3q2v_A 535 EGTVNNCM 542 (550)
T ss_dssp CC------
T ss_pred cCCCcchh
Confidence 99999987
No 7
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.1e-66 Score=563.49 Aligned_cols=450 Identities=22% Similarity=0.303 Sum_probs=389.5
Q ss_pred eeeeeeccCceEEeCCC---------------------ceeEEEEE-EEEEccCCCCcEEEEecCCCcccccccccccce
Q psy8639 6 KFKKYLSNNEIFTSTPN---------------------MVSRCKFK-KYLSNNEVCPKQIFTSTPNMVSRCKFKKYLSNN 63 (570)
Q Consensus 6 ~~~~~~~~~~~~~~~p~---------------------~~~~~~~~-~v~d~nd~~p~~~~~~~~~~~~~p~f~~~~~~~ 63 (570)
.|.|+..+|+|++..+- +++.+.+. .|+|+|||+| .|.+..|.+
T Consensus 56 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P--------------~F~~~~y~~ 121 (546)
T 1l3w_A 56 VFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRP--------------KFTQDVFRG 121 (546)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCC--------------EESSSCEEE
T ss_pred eEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcC--------------EecCceeEE
Confidence 58888777877665432 33334443 6666666666 688889999
Q ss_pred eecCCCCCCeEEEEEEEEcCCCCC--CCceEEEEEEecCCC-CCCCceEEECcccEEEEC-CcCCCCCCCeEEEEEEEEe
Q psy8639 64 EIKEDVPIGFTVGNVVSTDSTGRA--GGGHVMYSLTSLSPT-DHSGAFDIDKSSGSLVVA-RQLDRETCPEYKLEVRALD 139 (570)
Q Consensus 64 ~v~E~~~~gt~v~~l~a~D~D~~~--~~~~~~ysi~~~~~~-~~~~~F~id~~~G~l~~~-~~LD~E~~~~~~l~v~a~D 139 (570)
+|+|++++|+.|+++.|+|+|.+. .|+.++|+|.+..+. ...+.|.|++.+|.|++. ++||||....|.|+|+|+|
T Consensus 122 ~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D 201 (546)
T 1l3w_A 122 SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATD 201 (546)
T ss_dssp EEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEH
T ss_pred EEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEE
Confidence 999999999999999999999761 478999999543221 145899999999999985 7999999999999999999
Q ss_pred CCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCC--CCCCceEEEEEEecCCCCCcEE
Q psy8639 140 TSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDAD--DGSNGELRYGLVRQYPEGNHFS 217 (570)
Q Consensus 140 ~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~g~~~~~~y~l~~~~~~~~~F~ 217 (570)
.++ +++++++.|+|+|.|+|||+|+|....|.+.|.|+ +.|+.++++.|+|+| .|.|+.++|+|.. ...+.|.
T Consensus 202 ~g~--~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~--~~~~~F~ 276 (546)
T 1l3w_A 202 LEG--AGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV--NEGGFFN 276 (546)
T ss_dssp HHH--TSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC--CTTSCEE
T ss_pred CCC--CCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe--CCCceEE
Confidence 766 57899999999999999999999999999999999 999999999999999 7889999999987 3467999
Q ss_pred Ee--C--CCcEEEEcccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCC
Q psy8639 218 VD--H--LTGTLTLLQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRV 293 (570)
Q Consensus 218 Id--~--~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~ 293 (570)
|+ + .+|.|++.++||||....|.|+|.|+|+++...+.++++++|.|+|.|+|| +|.|.... |.+.|.|+.++
T Consensus 277 I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~--y~~~V~En~~~ 353 (546)
T 1l3w_A 277 ITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAV--SRVDVSEDLSR 353 (546)
T ss_dssp EEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCE--ECCCBCTTCCS
T ss_pred EEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecce--EEEEEeCCCCC
Confidence 96 2 579999999999999999999999999875433337889999999999999 99998776 78999999999
Q ss_pred CeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccce----eEEEEEEEEEECCcCCceeE
Q psy8639 294 GSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSK----FRAVLNITASDHGIPPKSSS 369 (570)
Q Consensus 294 g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~----~~~~l~V~a~D~g~~~~s~~ 369 (570)
|+.++++.|+|+|.|.++.++|+|..+ ..++|.|++.+|.|++.+.|| ||.. ..|.|+|.|+|+|.|+++++
T Consensus 354 g~~v~~v~A~D~D~g~n~~i~ysi~~~-~~~~F~Id~~tG~i~~~~~lD---~E~~~~~~~~y~l~V~a~D~g~p~~s~~ 429 (546)
T 1l3w_A 354 GEKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLD---RESEYVKNNTYTVIMLVTDDGVSVGTGT 429 (546)
T ss_dssp SEEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCC---TTSSSCCSSCCEEEEEEEECSSSCCCCC
T ss_pred CCEEEEEEEECCCCCCCceEEEEECCC-CCCcEEEeCCcEEEEECCccC---CccccCCCCEEEEEEEEEECCCCCcEeE
Confidence 999999999999999999999999875 578999999999999999999 9987 89999999999999999999
Q ss_pred EEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCcee
Q psy8639 370 LVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYV 449 (570)
Q Consensus 370 ~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 449 (570)
++|.|.|.|+||++|.|... ...++|+.++|+ + +.|+|+|.
T Consensus 430 ~~v~I~V~DvNDn~P~f~~~--~~~v~e~~~~g~-v--v~A~D~D~---------------------------------- 470 (546)
T 1l3w_A 430 GTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADI---------------------------------- 470 (546)
T ss_dssp EEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSC----------------------------------
T ss_pred EEEEEEEEECCCCcCCccCc--eEEEecCCCCCe-E--EEEEeCCC----------------------------------
Confidence 99999999999999999843 688999999997 3 89999999
Q ss_pred EEEEEeecCCCce-EEEEecCCCCCCcEEEeCCCc---EEEEcccCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEec
Q psy8639 450 YHMYLISDFSGYN-LTYMIPAGVADDMFKIDAETG---VVTLARSLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILDV 525 (570)
Q Consensus 450 ~~~~~~~~~~~~~-~~y~i~~~~~~~~F~Id~~tG---~i~~~~~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~dv 525 (570)
+.++. ++|+|..+. .+.|.| ..+| .+.+ +.+|||..+.|.|.|+|+|+++ ++++++|+|+|+|+
T Consensus 471 --------~~n~~~~~y~l~~~~-~~~f~i-~~~g~~~~~~~-~~~d~e~~~~y~l~V~a~D~g~-~s~~~~v~I~V~d~ 538 (546)
T 1l3w_A 471 --------PPNTYPYKVSLSHGS-DLTWKA-ELDSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN-NPQLTVVNATVCSC 538 (546)
T ss_dssp --------TTTTCCCCCBCCSCS-SSSCBC-CBCTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC-CCEEEECCEEECSC
T ss_pred --------CCCCccEEEEECCCC-CCCEEE-eccCCceEEEe-cccccccCceEEEEEEEEECCc-CceEEEEEEEEEec
Confidence 77776 899997654 357888 3344 4443 4568999999999999999995 89999999999999
Q ss_pred CCCCccc
Q psy8639 526 NDNAPEF 532 (570)
Q Consensus 526 Nd~~P~f 532 (570)
|||++..
T Consensus 539 NDn~~~C 545 (546)
T 1l3w_A 539 EGKAIKC 545 (546)
T ss_dssp SSSCCCC
T ss_pred cCCCCCc
Confidence 9997653
No 8
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=6.9e-65 Score=574.51 Aligned_cols=451 Identities=20% Similarity=0.271 Sum_probs=306.5
Q ss_pred EEEEccCCCCcEEEEecCCCcccccccccccceeec-CCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceE
Q psy8639 31 KYLSNNEVCPKQIFTSTPNMVSRCKFKKYLSNNEIK-EDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFD 109 (570)
Q Consensus 31 ~v~d~nd~~p~~~~~~~~~~~~~p~f~~~~~~~~v~-E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~ 109 (570)
.+.|+|||+| .|.+..|.++|+ |+.++|+.|+++.|+|+| .+..++|++. ...|.
T Consensus 26 ~~~d~ndn~P--------------~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D---~n~~i~Y~~~-------~~~F~ 81 (880)
T 1q55_A 26 INADVSGCKP--------------GFSSAEYIFSVNRRELERGRKLGKVNFSDCT---TRKHGLYDVG-------DSRFR 81 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecccccCCCC--------------ccCCCeEEEEechhhCCCCCEEEEEEEEeCC---CCceEEEEeC-------CCCEE
Confidence 7788888888 488888989999 999999999999999998 4678999981 24899
Q ss_pred EECcccEEEECCcCCCCCCCeEEEEEEEEeCCCCCCCceeEEEEEEE-EeeC----------CCCCCcCCCCce------
Q psy8639 110 IDKSSGSLVVARQLDRETCPEYKLEVRALDTSTSSNPQSSAVAIKIE-IVDV----------NDNAPRWGENPL------ 172 (570)
Q Consensus 110 id~~~G~l~~~~~LD~E~~~~~~l~v~a~D~~g~~~~~s~~~~v~I~-V~dv----------Nd~~P~f~~~~~------ 172 (570)
|++ +|.|+++++||||.. |.|+|+|+|.++ + .....|+|. |.+. |+++|.|....+
T Consensus 82 Id~-~G~i~~~~~Ld~e~~--~~l~V~A~D~~~--~--~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~ 154 (880)
T 1q55_A 82 VLP-DGTVLVKRHVKLHKD--TKFTISTWDARG--I--KHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKK 154 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECC-CceEEECCccccccc--eEEEEEEEcCCC--C--eEEEEEEEEEecccccccccccccccCcccccccccccceee
Confidence 997 899999999999997 999999999654 2 334445555 3332 455788876532
Q ss_pred ------EEEEeCCCC--CCeEEEEeEEecCCCCCCceEEEEEEecCC---CCCcEEEeCCCcEEEEcccCCccCcceEEE
Q psy8639 173 ------TIPVNEDTL--VGSTIWNFTATDADDGSNGELRYGLVRQYP---EGNHFSVDHLTGTLTLLQPLDYETLTSFIL 241 (570)
Q Consensus 173 ------~~~v~E~~~--~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~---~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l 241 (570)
.+.|.|+.+ .+..++++.+ |.| .++.++|+|..+.. +.+.|.|++.+|.|++.++||||....|.|
T Consensus 155 r~~~~~~~~v~En~~~~~~~~v~~v~~-d~d--~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l 231 (880)
T 1q55_A 155 RDWVIPPIKVSENERGPFPKRLVQIKS-NKD--RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVL 231 (880)
T ss_dssp -CCCCCCEEEESSCCSSSCEEEEECCC-SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEE
T ss_pred ccccccceEEeCCCCCCCCeEEEEEee-CCC--CCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEE
Confidence 579999987 4667777764 444 67899999987632 246899999999999999999999999999
Q ss_pred EEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCC---CCeEEEEEEE
Q psy8639 242 VVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSG---DNGRVTYVIS 318 (570)
Q Consensus 242 ~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~ysi~ 318 (570)
+|+|+|.+++. .+.++.|+|+|.|+|||+|.|.... |.+.|.|++++|+.++++.|+|+|.+ .|+.++|+|.
T Consensus 232 ~v~A~D~g~~~---~~~~~~v~I~V~DvNDn~P~F~~~~--y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~ 306 (880)
T 1q55_A 232 SSHAVSENGSP---VEEPMEITINVIDQNDNRPKFTQDV--FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSIL 306 (880)
T ss_dssp EEEEEESSSCB---CSCCEEEEEEEECCSCCCCEESSSC--EEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEE
T ss_pred EEEEEECCCCc---eeeeEEEEEEEEecCCCCCCccCCc--EEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEc
Confidence 99999998754 6778999999999999999999876 89999999999999999999999998 6899999999
Q ss_pred eCC----CCCcEEEecCCCEEEEE-eecCcccccceeEEEEEEEEEECCcCCceeEEEEEEEEeeCCCCCCeecCCeeEE
Q psy8639 319 GGN----EDARFHLDHDKGILSLA-RVISEYDHQSKFRAVLNITASDHGIPPKSSSLVINILSETVSTSLPTFLSPSYHA 393 (570)
Q Consensus 319 ~~~----~~~~F~id~~tG~l~~~-~~ld~~d~e~~~~~~l~V~a~D~g~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~ 393 (570)
.+. ..++|.|++.+|.|++. +.|| ||....|.|+|+|+|+|.|+++++++|.|+|.|+|||+|.|....|.+
T Consensus 307 ~~~~~~~~~~~F~Id~~tG~I~~~~~~LD---rE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~ 383 (880)
T 1q55_A 307 KQDPEEPIPNLFTINRETGVISLIGTGLD---REKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTA 383 (880)
T ss_dssp EESSCCSCSCSEEECTTTCEEEECSCCCC---TTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEE
T ss_pred CCCCCcccCCeEEEccCCccEEEecccCC---HHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEE
Confidence 875 35799999999999985 6888 999999999999999998889999999999999999999999999999
Q ss_pred EEeCCCCCCcEEEEEEEecCC--CCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCCceEEEEecCCC
Q psy8639 394 NVSEDAIPGTYIIKVVARSPS--TYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSGYNLTYMIPAGV 471 (570)
Q Consensus 394 ~v~E~~~~gt~v~~v~a~D~D--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~~ 471 (570)
.|.|+ ++|+.|++|.|+|+| . +.++.++|+|.. +
T Consensus 384 ~V~En-~~gt~V~~v~A~D~D~~~------------------------------------------g~n~~v~Ysi~~-~ 419 (880)
T 1q55_A 384 LVPEN-EIGFEVQRLSVTDLDMPG------------------------------------------TPAWQAVYKIRV-N 419 (880)
T ss_dssp EEESS-SCCCEEEEECBCCCSCTT------------------------------------------STTSCEECCBSC-C
T ss_pred EeecC-CCCcEEEEEEEECCCCCC------------------------------------------CCCceEEEEEec-C
Confidence 99999 999999999999999 5 678899999987 6
Q ss_pred CCCcEEEe--C--CCcEEEEcccCCccccceEEEEEEEEeCCC----CCeeEEEEEEEEEecCCCCcccccCCeeeEEec
Q psy8639 472 ADDMFKID--A--ETGVVTLARSLDRETVDQYNLVVHVTDSKS----GDYDTTNVFITILDVNDNAPEFKSGSCYPITIP 543 (570)
Q Consensus 472 ~~~~F~Id--~--~tG~i~~~~~lD~E~~~~~~l~V~atD~~~----~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~~v~ 543 (570)
..+.|.|+ + .+|.|++.++||||....|.|+|+|+|++. +++++++|+|+|.|+|| +|.|. +..|...|+
T Consensus 420 ~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~-~~~y~~~V~ 497 (880)
T 1q55_A 420 EGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFV-PAVSRVDVS 497 (880)
T ss_dssp TTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEES-SCEECCCBC
T ss_pred CCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEe-cCceEEEEe
Confidence 67899995 2 579999999999999999999999999863 36889999999999999 99999 788999999
Q ss_pred CCCCCC-eEEEEEEEeCCCCCcceecC
Q psy8639 544 ENSEAA-NVHTFIATDFGNFHKSFIDS 569 (570)
Q Consensus 544 E~~~~~-~v~~i~a~D~D~~~~~~~~~ 569 (570)
|+.+.| .|+++.|+|+|.|.++.+.+
T Consensus 498 En~~~Gt~V~~v~A~D~D~g~n~~v~Y 524 (880)
T 1q55_A 498 EDLSRGEKIISLVAQDPDKQQIQKLSY 524 (880)
T ss_dssp TTCCSSEEEEECCEECCCTTCCCCEEE
T ss_pred CCCCCCCEEEEEEEEeCCCCCCCcEEE
Confidence 999999 88999999999988776543
No 9
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=4.2e-60 Score=496.45 Aligned_cols=389 Identities=22% Similarity=0.359 Sum_probs=344.8
Q ss_pred CeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEEC--------cccEEEECCcCCCCCC---CeEEEEEEEEeC
Q psy8639 72 GFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDK--------SSGSLVVARQLDRETC---PEYKLEVRALDT 140 (570)
Q Consensus 72 gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~--------~~G~l~~~~~LD~E~~---~~~~l~v~a~D~ 140 (570)
...+.+++|+|+|.+ .++.++|+| .. ......|.|++ .+|.|+++++||||+. ..|.|.|+|+|.
T Consensus 8 ~~Pv~~v~AtD~D~g-~n~~v~Ysi--~~-~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~ 83 (419)
T 3ubh_A 8 VRPTKRIEFTEADGD-TEGKSVFQL--EK-ETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNM 83 (419)
T ss_dssp EEEEEEEEEEGGGGC-STTCEEEEC--CC-SSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC-
T ss_pred ccceEEEEEEcccCC-CCceEEEEE--ec-CCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeC
Confidence 356889999999998 799999999 33 34468899986 7999999999999997 699999999996
Q ss_pred CCCC-CCceeEEEEEEEEeeCCCCCCcCCCCc--eEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEE
Q psy8639 141 STSS-NPQSSAVAIKIEIVDVNDNAPRWGENP--LTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFS 217 (570)
Q Consensus 141 ~g~~-~~~s~~~~v~I~V~dvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~ 217 (570)
+... ...++...|+|+|.|+|||+|.|.... |...|.|++++|+.++++.|+|+|.|.+ ++|+|..+.. .+.|.
T Consensus 84 g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~-~~~F~ 160 (419)
T 3ubh_A 84 GHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRT-GGRFE 160 (419)
T ss_dssp -CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESS-SSCEE
T ss_pred CCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCC-CCeEE
Confidence 5311 257788999999999999999999876 7899999999999999999999998875 9999987653 57999
Q ss_pred EeCCCcEEEEcccCCccCcceEEEEEEEEECCCCCCC-CceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeE
Q psy8639 218 VDHLTGTLTLLQPLDYETLTSFILVVKVTDQAANISE-RLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSH 296 (570)
Q Consensus 218 Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~-~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~ 296 (570)
|++.+|.|++.+.||+|....|.|+|+|+|++++..+ .+++++.+.|.|.| |||+|.|.... |.+.|.|+.+.|+.
T Consensus 161 I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~--y~~~v~En~~~gt~ 237 (419)
T 3ubh_A 161 VDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPS--YEAEIPENQKKDSD 237 (419)
T ss_dssp ECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSC--EEEEEETTCCTTCE
T ss_pred EeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCe--eEEEecCCCCCCcE
Confidence 9999999999999999999999999999998764221 25778889999999 99999998877 89999999999999
Q ss_pred EEEEEEEeCCCCCCeEEEEEEE-eCCCCCcEEEecCCCEEEEEeecCccccccee---EEEEEEEEEECCcCCceeEEEE
Q psy8639 297 VTKMTAVDQDSGDNGRVTYVIS-GGNEDARFHLDHDKGILSLARVISEYDHQSKF---RAVLNITASDHGIPPKSSSLVI 372 (570)
Q Consensus 297 v~~v~a~D~D~~~~~~i~ysi~-~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~---~~~l~V~a~D~g~~~~s~~~~v 372 (570)
++++.|+|+| ++.++|+|. .++..++|.|++.+|.|++.+.|| ||... .|.|+|.|+|.+ +++++.++|
T Consensus 238 v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD---~E~~~~~~~y~l~V~a~dd~-~~~s~~~~v 310 (419)
T 3ubh_A 238 IISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELD---FEDLRQPHVYSLIVTATEDS-GGFSTSVDL 310 (419)
T ss_dssp EEECCEECSS---CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCC---TTCTTSCSEEEEEEEEECTT-TSCEEEEEE
T ss_pred EEEEEEecCC---CCceEEEEecCCCCCCcEEEECCCCEEEECcccC---ccccccccEEEEEEEEEeCC-CCcEEEEEE
Confidence 9999999987 677999998 455689999999999999999999 88765 899999999754 468899999
Q ss_pred EEEEeeCCCCCCeecCCeeEE-EEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEE
Q psy8639 373 NILSETVSTSLPTFLSPSYHA-NVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYH 451 (570)
Q Consensus 373 ~I~V~dvNd~~P~f~~~~~~~-~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 451 (570)
+|.|.|+|||+|.|..+.|.. .|+|+.++|+.|+++.|+|+|.
T Consensus 311 ~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~------------------------------------ 354 (419)
T 3ubh_A 311 TIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDS------------------------------------ 354 (419)
T ss_dssp EEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSC------------------------------------
T ss_pred EEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCC------------------------------------
Confidence 999999999999999998886 7999999999999999999999
Q ss_pred EEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEcccCCccc-cceEEEEEEEEeCCC-CCeeEEEEEEEEEe
Q psy8639 452 MYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLARSLDRET-VDQYNLVVHVTDSKS-GDYDTTNVFITILD 524 (570)
Q Consensus 452 ~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~-~~~~~l~V~atD~~~-~~~~~~~v~I~V~d 524 (570)
+.|+.++|+|.. ++|.|++ +|.|++.+.||||. ...|.|+|+|+|++. +++++++|+|.|.|
T Consensus 355 ------g~n~~v~Y~i~~----~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 355 ------GSNAEIEYLVSD----DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKN 418 (419)
T ss_dssp ------GGGGCEEEEESC----TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEEEEEEEC
T ss_pred ------CCCCEEEEEEcC----CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEEEEEEec
Confidence 889999999954 4899998 89999999999998 689999999999998 68888898888876
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-52 Score=439.15 Aligned_cols=333 Identities=24% Similarity=0.357 Sum_probs=296.4
Q ss_pred eEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeC--------CCcEEEEcccCCccCc---ceEEEEEEEEECCCCC
Q psy8639 184 STIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDH--------LTGTLTLLQPLDYETL---TSFILVVKVTDQAANI 252 (570)
Q Consensus 184 t~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~--------~~G~i~~~~~lD~e~~---~~~~l~v~a~D~~~~~ 252 (570)
..+.+|.|+|+|.|.|+.++|+|..+.. ...|.|++ .+|.|++.++||||.. ..|.|.|.|+|.+.+.
T Consensus 9 ~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~-~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~ 87 (419)
T 3ubh_A 9 RPTKRIEFTEADGDTEGKSVFQLEKETD-KETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 87 (419)
T ss_dssp EEEEEEEEEGGGGCSTTCEEEECCCSST-TCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred cceEEEEEEcccCCCCceEEEEEecCCC-CceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence 5688999999999999999999987643 57899986 7999999999999997 6899999999987554
Q ss_pred CCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCC
Q psy8639 253 SERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDK 332 (570)
Q Consensus 253 ~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~t 332 (570)
+...++.+.|.|+|.|+|||+|.|......|...|.|++++|+.++++.|+|+|.|.+ ++|+|..++..++|.|++.+
T Consensus 88 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~t 165 (419)
T 3ubh_A 88 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS 165 (419)
T ss_dssp SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTT
T ss_pred CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCc
Confidence 3347888999999999999999998764335789999999999999999999999877 89999987778999999999
Q ss_pred CEEEEEeecCcccccceeEEEEEEEEEECCcC----CceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEE
Q psy8639 333 GILSLARVISEYDHQSKFRAVLNITASDHGIP----PKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKV 408 (570)
Q Consensus 333 G~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~~----~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v 408 (570)
|.|++.+.++ +|....|.|+|+|+|+|.+ .+++++++.|.|.| ||++|.|.+..|.+.|.||.++|+.|+++
T Consensus 166 G~i~~~~~ld---~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v 241 (419)
T 3ubh_A 166 GVVRTRGTDL---FQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISI 241 (419)
T ss_dssp CEEEECSSSC---CCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEEC
T ss_pred eEEEEecccc---cccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEE
Confidence 9999999888 9988999999999998754 45788889999999 99999999999999999999999999999
Q ss_pred EEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCCceEEEEec-CCCCCCcEEEeCCCcEEEE
Q psy8639 409 VARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSGYNLTYMIP-AGVADDMFKIDAETGVVTL 487 (570)
Q Consensus 409 ~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~-~~~~~~~F~Id~~tG~i~~ 487 (570)
.|+|+|. +.++|+|. .++..++|+|++.+|.|++
T Consensus 242 ~A~D~dn---------------------------------------------~~i~Ysi~~~~~~~~~F~I~~~tG~i~~ 276 (419)
T 3ubh_A 242 KAKSFAD---------------------------------------------REIRYTLKAQGQGAGTFNIGPTSGIVKL 276 (419)
T ss_dssp CEECSSC---------------------------------------------CCCEEEEEESSSCCSSEEECTTTCEEEE
T ss_pred EEecCCC---------------------------------------------CceEEEEecCCCCCCcEEEECCCCEEEE
Confidence 9999765 67999996 4666789999999999999
Q ss_pred cccCCccccc---eEEEEEEEEeCCCCCeeEEEEEEEEEecCCCCcccccCCeeeE-EecCCCCCC-eEEEEEEEeCCCC
Q psy8639 488 ARSLDRETVD---QYNLVVHVTDSKSGDYDTTNVFITILDVNDNAPEFKSGSCYPI-TIPENSEAA-NVHTFIATDFGNF 562 (570)
Q Consensus 488 ~~~lD~E~~~---~~~l~V~atD~~~~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~-~v~E~~~~~-~v~~i~a~D~D~~ 562 (570)
.++||||... .|.|+|+|+|.+++++++++|+|+|.|+|||+|.|. ...|.. .|+|+.+.| .|+++.|+|+|+|
T Consensus 277 ~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~-~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g 355 (419)
T 3ubh_A 277 AKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFE-LPDYQAHNVDEDIPLGTSILRVKAMDSDSG 355 (419)
T ss_dssp CSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEES-SSEEEEEEEETTCCTTCEEEECCEECSSCG
T ss_pred CcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCccc-CCcceeEEecCCCCCCCEEEEEEEEeCCCC
Confidence 9999999875 799999999655478899999999999999999999 777876 799999999 8999999999999
Q ss_pred CcceecC
Q psy8639 563 HKSFIDS 569 (570)
Q Consensus 563 ~~~~~~~ 569 (570)
.|+.+.+
T Consensus 356 ~n~~v~Y 362 (419)
T 3ubh_A 356 SNAEIEY 362 (419)
T ss_dssp GGGCEEE
T ss_pred CCCEEEE
Confidence 9986643
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=6.3e-50 Score=403.02 Aligned_cols=301 Identities=28% Similarity=0.461 Sum_probs=268.4
Q ss_pred cceeecCC--CCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 61 SNNEIKED--VPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 61 ~~~~v~E~--~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
+...|.|+ .+.|+.|+++. +|+|.+ ++.++|+|.+ ....+.|.|++.+|.|++.++||||....|.|+|+|+
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g--~~~i~Y~l~~---~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 78 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG--SKKIKYILSG---DGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAV 78 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS--SCCCEEEEEE---TTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEE
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC--CCEEEEEEEC---CCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEE
Confidence 45689999 88999999986 899976 5789999943 2345789999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCC---CCCceEEEEEEecCCCCCc
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADD---GSNGELRYGLVRQYPEGNH 215 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---g~~~~~~y~l~~~~~~~~~ 215 (570)
|.+++ ++++....|+|+|.|+|||+|.|....|.+.|.|+++.|+.++++.|+|+|. |.|+.++|+|.++. ++
T Consensus 79 D~~~~-~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~---~~ 154 (322)
T 2a62_A 79 DFETN-KPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ---PY 154 (322)
T ss_dssp CTTTC-SEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT---TT
T ss_pred ECCCC-CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC---CC
Confidence 96542 4577888999999999999999999999999999999999999999999995 78899999999864 58
Q ss_pred EEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCC
Q psy8639 216 FSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVG 294 (570)
Q Consensus 216 F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g 294 (570)
|.|++.+|.|++. +.||||....|.|+|.|+|.++++.+ ++++++|+|+|.|+|||+|.|.... |.+.|.|+.+.|
T Consensus 155 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~-~s~~~~v~I~V~DvNDn~P~F~~~~--y~~~v~En~~~g 231 (322)
T 2a62_A 155 FSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGG-LSGTTTLTVTLTDVNDNPPKFAQSL--YHFSVPEDVVLG 231 (322)
T ss_dssp EEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSC-CBCCEEEEEEECCCCCCCCCCSCSE--EEEEECSCCSSC
T ss_pred EEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCC-ceeEEEEEEEEEecCCCCCeecCCC--ceeEeECCCCCC
Confidence 9999999999998 89999999999999999999876433 6889999999999999999998776 899999999999
Q ss_pred eEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEe----cCCCEEEEEeecCcccccceeEEEEEEEEEECCcCC-----
Q psy8639 295 SHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLD----HDKGILSLARVISEYDHQSKFRAVLNITASDHGIPP----- 365 (570)
Q Consensus 295 ~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id----~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~~~----- 365 (570)
+.++++.|+|+|.|.|+.++|+|..++..++|.|+ ..+|.|++.++|| ||....|.|+|.|+|+|.|+
T Consensus 232 t~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD---~E~~~~y~l~V~A~D~g~pp~~~~~ 308 (322)
T 2a62_A 232 TAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLD---FETKKSYTLKVEAANIHIDPRFSSR 308 (322)
T ss_dssp CEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSCCC---CSSCCEEEEEEEEECCCSSCTTSSC
T ss_pred cEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCcCC---cccCCeEEEEEEEEECCCCCccccC
Confidence 99999999999999999999999988778999998 4579999999999 99999999999999998775
Q ss_pred --ceeEEEEEEEEe
Q psy8639 366 --KSSSLVINILSE 377 (570)
Q Consensus 366 --~s~~~~v~I~V~ 377 (570)
++++++|.|.|.
T Consensus 309 ~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 309 GPFKDTATVKIVVE 322 (322)
T ss_dssp CCCCCCCEEEEEEC
T ss_pred CCcccEEEEEEEEC
Confidence 357788888773
No 12
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=4.9e-48 Score=389.24 Aligned_cols=298 Identities=28% Similarity=0.383 Sum_probs=267.0
Q ss_pred eEEEEeCC--CCCCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECC
Q psy8639 172 LTIPVNED--TLVGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQA 249 (570)
Q Consensus 172 ~~~~v~E~--~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~ 249 (570)
+.+.|.|+ .+.|+.++++. +|.|.| ++.++|+|..+. ..++|.|++.+|.|++.++||||....|.|+|.|+|++
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDG-AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFE 81 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETT-BTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCC-CCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECC
Confidence 45688999 88999999985 899987 678999998753 24699999999999999999999999999999999987
Q ss_pred CCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCC---CCCeEEEEEEEeCCCCCcE
Q psy8639 250 ANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDS---GDNGRVTYVISGGNEDARF 326 (570)
Q Consensus 250 ~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~ysi~~~~~~~~F 326 (570)
++. .++..+.+.|+|.|+|||+|.|.... |.+.|.|+++.|+.++++.|+|+|. |.|+.++|+|..+ ..+|
T Consensus 82 ~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~--y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~--~~~F 155 (322)
T 2a62_A 82 TNK--PLEPPSEFIIKVQDINDNAPEFLNGP--YHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG--QPYF 155 (322)
T ss_dssp TCS--EEEEEEEECEECCCCSCSCBCCSSSE--EEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC--TTTE
T ss_pred CCC--cccceEEEEEEEEecCCCCCccCCCc--eEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC--CCCE
Confidence 531 16778899999999999999998876 8999999999999999999999996 7889999999986 4689
Q ss_pred EEecCCCEEEEE-eecCcccccceeEEEEEEEEEECCcCC--ceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCc
Q psy8639 327 HLDHDKGILSLA-RVISEYDHQSKFRAVLNITASDHGIPP--KSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGT 403 (570)
Q Consensus 327 ~id~~tG~l~~~-~~ld~~d~e~~~~~~l~V~a~D~g~~~--~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt 403 (570)
.|++.+|.|++. +.|| ||....|.|+|.|+|+|.|+ +++.++|+|.|.|+|||+|.|.+..|.+.|.|+.++|+
T Consensus 156 ~Id~~tG~i~~~~~~LD---~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt 232 (322)
T 2a62_A 156 SIEPETAIIKTALPNMD---REAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGT 232 (322)
T ss_dssp EECTTTCCEEECSSCCC---GGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCC
T ss_pred EEecCCCEEEecccCCC---cccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCc
Confidence 999999999998 8899 99999999999999998874 88999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEe----
Q psy8639 404 YIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKID---- 479 (570)
Q Consensus 404 ~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id---- 479 (570)
.|++|.|+|+|. +.|+.++|+|..++..+.|.|+
T Consensus 233 ~v~~v~A~D~D~------------------------------------------g~n~~i~Y~i~~g~~~~~F~I~~d~~ 270 (322)
T 2a62_A 233 AIGRVKANDQDI------------------------------------------GENAQSSYDIIDGDGTALFEITSDAQ 270 (322)
T ss_dssp EEEEEECCCSSC------------------------------------------GGGTCCEEEEC---CCSSBCCBCCTT
T ss_pred EEEEEEEEeCCC------------------------------------------CCCceEEEEEECCCCCCcEEEeccCC
Confidence 999999999999 8899999999888778899998
Q ss_pred CCCcEEEEcccCCccccceEEEEEEEEeCCC--------CCeeEEEEEEEEE
Q psy8639 480 AETGVVTLARSLDRETVDQYNLVVHVTDSKS--------GDYDTTNVFITIL 523 (570)
Q Consensus 480 ~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~--------~~~~~~~v~I~V~ 523 (570)
..+|.|++.++||||....|.|+|+|+|++. +++++++|.|+|.
T Consensus 271 ~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 271 AQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp TSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred CceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 4589999999999999999999999999875 2457788888873
No 13
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.7e-46 Score=378.75 Aligned_cols=291 Identities=26% Similarity=0.396 Sum_probs=245.9
Q ss_pred eEEEEeEEecCCCCCCceEEEEEEecCC--------CCCcEEEeCCCcEEEEcccCCccCc-----ceEEEEEEEEECCC
Q psy8639 184 STIWNFTATDADDGSNGELRYGLVRQYP--------EGNHFSVDHLTGTLTLLQPLDYETL-----TSFILVVKVTDQAA 250 (570)
Q Consensus 184 t~v~~v~a~D~D~g~~~~~~y~l~~~~~--------~~~~F~Id~~~G~i~~~~~lD~e~~-----~~~~l~v~a~D~~~ 250 (570)
..+.++.|+|+|.|.++.+.|+|..+.+ ...+|.|++ +|.|++.++||||.. ..|.++|+|.|++.
T Consensus 4 ~p~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~ 82 (316)
T 3ubf_A 4 RPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 82 (316)
T ss_dssp EEEEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-----
T ss_pred CceEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCC
Confidence 3466777777777777777777766432 135788888 999999999999984 57888888888774
Q ss_pred CCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEec
Q psy8639 251 NISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDH 330 (570)
Q Consensus 251 ~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~ 330 (570)
+. +++++++|.|+|.|+|||+|.|......|.+.|.|++++|+.++++.|+|+|.|.+ ++|+|..++..++|.|++
T Consensus 83 ~~--~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~ 158 (316)
T 3ubf_A 83 GI--KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDE 158 (316)
T ss_dssp ----CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECT
T ss_pred CC--cccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEEC
Confidence 31 26889999999999999999998764336899999999999999999999999877 999999776789999999
Q ss_pred CCCEEEEEeecCcccccceeEEEEEEEEEECCc----CCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEE
Q psy8639 331 DKGILSLARVISEYDHQSKFRAVLNITASDHGI----PPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYII 406 (570)
Q Consensus 331 ~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~----~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~ 406 (570)
.+|.|++.+.|| ||....|.|+|.|+|+|. +.++++++++|.|.| ||++|.|.+..|.+.|.|+.++|+.|+
T Consensus 159 ~tG~i~~~~~lD---~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~ 234 (316)
T 3ubf_A 159 RSGVVRTRGTDL---FQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDII 234 (316)
T ss_dssp TTCEEEECSSCC---CCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEE
T ss_pred CccEEEECCcCC---cccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEE
Confidence 999999999999 999999999999999874 457888999999999 999999999999999999999999999
Q ss_pred EEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCCceEEEEec-CCCCCCcEEEeCCCcEE
Q psy8639 407 KVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSGYNLTYMIP-AGVADDMFKIDAETGVV 485 (570)
Q Consensus 407 ~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~-~~~~~~~F~Id~~tG~i 485 (570)
++.|+|+|. +.++|+|. .++..++|.|++.+|.|
T Consensus 235 ~v~A~D~Dn---------------------------------------------~~i~Y~i~~~~~~~~~F~Id~~tG~i 269 (316)
T 3ubf_A 235 SIKAKSFAD---------------------------------------------REIRYTLKAQGQGAGTFNIGPTSGIV 269 (316)
T ss_dssp ECCEECTTC---------------------------------------------CCEEEEEEEESSCTTTEEECTTTCEE
T ss_pred EEEEEeCCC---------------------------------------------CEEEEEEEcCCCCCCeEEEECCeEEE
Confidence 999999875 67999997 56677899999999999
Q ss_pred EEcccCCcccc---ceEEEEEEEE-eCCCCCeeEEEEEEEEEecCCCC
Q psy8639 486 TLARSLDRETV---DQYNLVVHVT-DSKSGDYDTTNVFITILDVNDNA 529 (570)
Q Consensus 486 ~~~~~lD~E~~---~~~~l~V~at-D~~~~~~~~~~v~I~V~dvNd~~ 529 (570)
++.++||||.. ..|.|+|+|+ |++ +++++++|+|+|+|+||||
T Consensus 270 ~~~~~LD~E~~~~~~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 270 KLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp EECSCCCSSCTTSCSEEEEEEEEEESSS-SCEEEEEEEEEEECC----
T ss_pred EECCcCCccccCCCceEEEEEEEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 99999999998 7999999999 555 7899999999999999985
No 14
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1e-45 Score=373.06 Aligned_cols=296 Identities=19% Similarity=0.300 Sum_probs=246.7
Q ss_pred cceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCC-----CeEEEEE
Q psy8639 61 SNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETC-----PEYKLEV 135 (570)
Q Consensus 61 ~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~-----~~~~l~v 135 (570)
+.++.+|+.+.|+.++++.+.+ ..++|+| . ...++|.|++ +|.|+++++||||.. ..|.|+|
T Consensus 9 ~~atd~D~g~ng~v~y~l~~~~-------~~~~f~i--~---~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v 75 (316)
T 3ubf_A 9 IEFTEADGDTEGKSVFQLEKET-------DKETFKI--R---DDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVII 75 (316)
T ss_dssp EEEESGGGCSTTCEEEECCCSS-------TTCEEEE--S---SCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEE
T ss_pred EEEEecCCCCCceEEEEEEcCC-------CcceEEE--e---CCCCeEEECC-CeEEEECCccChhhcccccceEEEEEE
Confidence 5567777777788777776633 2467887 2 2246899998 999999999999994 4688888
Q ss_pred EEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCc--eEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCCC
Q psy8639 136 RALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENP--LTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPEG 213 (570)
Q Consensus 136 ~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~ 213 (570)
+|.|++. ++.++++..|+|.|.|+|||+|.|.... |.+.|.|+++.|+.++++.|+|+|.|.+ ++|+|..+.. .
T Consensus 76 ~a~d~~~-~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~-~ 151 (316)
T 3ubf_A 76 TNMGHNA-GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRT-G 151 (316)
T ss_dssp EC--------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEES-S
T ss_pred EEcCCCC-CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCC-C
Confidence 8888543 2357899999999999999999999876 8999999999999999999999998876 9999987643 5
Q ss_pred CcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECCCCCC-CCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCC
Q psy8639 214 NHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQAANIS-ERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTR 292 (570)
Q Consensus 214 ~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~-~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~ 292 (570)
++|.|++.+|.|++.++||||....|.|+|.|+|++++.. +.+++++.++|.|.| |||+|.|.... |.+.|.|+++
T Consensus 152 ~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~--y~~~v~En~~ 228 (316)
T 3ubf_A 152 GRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPS--YEAEIPENQK 228 (316)
T ss_dssp SCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSS--EEEEEETTCC
T ss_pred CEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCC--ceEEEeCCCC
Confidence 7999999999999999999999999999999999986421 126778899999999 99999999887 8999999999
Q ss_pred CCeEEEEEEEEeCCCCCCeEEEEEEE-eCCCCCcEEEecCCCEEEEEeecCcccccce---eEEEEEEEEEECCcCCcee
Q psy8639 293 VGSHVTKMTAVDQDSGDNGRVTYVIS-GGNEDARFHLDHDKGILSLARVISEYDHQSK---FRAVLNITASDHGIPPKSS 368 (570)
Q Consensus 293 ~g~~v~~v~a~D~D~~~~~~i~ysi~-~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~---~~~~l~V~a~D~g~~~~s~ 368 (570)
+|+.++++.|+|+| ++.++|+|. .++..++|.|++.+|.|++.+.|| ||.. ..|.|+|.|+|.+. ++++
T Consensus 229 ~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD---~E~~~~~~~y~l~V~A~dd~g-~~~~ 301 (316)
T 3ubf_A 229 KDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELD---FEDLRQPHVYSLIVTATEDSG-GFST 301 (316)
T ss_dssp TTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCC---SSCTTSCSEEEEEEEEEESSS-SCEE
T ss_pred CCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCC---ccccCCCceEEEEEEEEECCC-CCEE
Confidence 99999999999998 677999998 566789999999999999999999 9987 79999999995333 5899
Q ss_pred EEEEEEEEeeCCCCC
Q psy8639 369 SLVINILSETVSTSL 383 (570)
Q Consensus 369 ~~~v~I~V~dvNd~~ 383 (570)
+++|+|.|.|+||||
T Consensus 302 ~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 302 SVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEEEEEEEECC----
T ss_pred EEEEEEEEEecCCCC
Confidence 999999999999985
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=6.3e-37 Score=290.01 Aligned_cols=205 Identities=29% Similarity=0.487 Sum_probs=185.9
Q ss_pred ccccccccccc--eeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCC
Q psy8639 52 SRCKFKKYLSN--NEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCP 129 (570)
Q Consensus 52 ~~p~f~~~~~~--~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~ 129 (570)
++|.|.+..|. ++|+|++++|+.|+++.|+|+|. +.++|+|.+ ....+.|.|++.+|.|+++++||||...
T Consensus 4 ~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~----~~~~y~i~~---~~~~~~F~Id~~tG~i~~~~~LD~E~~~ 76 (210)
T 3mvs_A 4 RLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN----DPLVFGVSG---EEASRFFAVEPDTGVVWLRQPLDRETKS 76 (210)
T ss_dssp CCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC----CCCEEEEES---HHHHHHEEECTTTCEEEESSCCCTTTCC
T ss_pred CCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC----CcEEEEEeC---CCCCCcEEEeCCCCEEEECCccCCcccc
Confidence 57899999998 59999999999999999999983 468999932 2335789999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEec
Q psy8639 130 EYKLEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQ 209 (570)
Q Consensus 130 ~~~l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~ 209 (570)
.|.|+|+|+|+++ ..+..++|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+|.|.|+.++|+|..+
T Consensus 77 ~y~l~v~a~D~~~-----~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~ 151 (210)
T 3mvs_A 77 EFTVEFSVSDHQG-----VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP 151 (210)
T ss_dssp EEEEEEEEECSSC-----EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC
T ss_pred eEEEEEEEEeCCC-----CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC
Confidence 9999999999643 46789999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCC
Q psy8639 210 YPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNA 273 (570)
Q Consensus 210 ~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~ 273 (570)
.++|.|++.+|.|++.++||||....|.|+|.|+|+++++ .++++++++|+|.|+||+|
T Consensus 152 ---~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~--~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 152 ---SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTR--PLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp ---CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSS--CCEEEEEEEEEEECCCCCC
T ss_pred ---CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCC--CCEEEEEEEEEEEccCCCC
Confidence 4699999999999999999999999999999999998532 3789999999999999975
No 16
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2e-36 Score=286.64 Aligned_cols=206 Identities=26% Similarity=0.420 Sum_probs=177.9
Q ss_pred cccceeecCCC--CCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEE
Q psy8639 59 YLSNNEIKEDV--PIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVR 136 (570)
Q Consensus 59 ~~~~~~v~E~~--~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~ 136 (570)
-.|.+.|.|+. +.|+.|+++ |+|+|.+ ++.++|+|.+ ......|.|++.+|.|+++++||||....|.|+|+
T Consensus 4 ~~~~~~v~En~~~p~~~~v~~v-a~D~D~g--n~~i~Y~l~~---~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~ 77 (215)
T 2a4e_A 4 VWNQFFVIEEYTGPDPVLVGRL-HSDIDSG--DGNIKYILSG---EGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQ 77 (215)
T ss_dssp CCCEEEEETTCCSSSCEEEEEC-CCTTCCS--SSCEEEEEEE---TTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEE
T ss_pred EEeeEEEeccCCCCCCEEEEEE-EECCCCC--CCeEEEEEEC---CCCCCeEEEECCceEEEECCccCCccCCEEEEEEE
Confidence 34677899994 579999988 7999976 6889999943 23356899999999999999999999999999999
Q ss_pred EEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCC---CCCceEEEEEEecCCCC
Q psy8639 137 ALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADD---GSNGELRYGLVRQYPEG 213 (570)
Q Consensus 137 a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---g~~~~~~y~l~~~~~~~ 213 (570)
|+|.+++ ++++.+..|+|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+|. |.|+.++|+|..+.
T Consensus 78 a~D~~~~-~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--- 153 (215)
T 2a4e_A 78 AVDRDTN-RPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--- 153 (215)
T ss_dssp EEETTTC-CEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST---
T ss_pred EEECCCC-CcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC---
Confidence 9997542 4578889999999999999999999999999999999999999999999996 88899999999864
Q ss_pred CcEEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCe
Q psy8639 214 NHFSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPV 275 (570)
Q Consensus 214 ~~F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~ 275 (570)
..|.|++.+|.|++. ++||||....|.|.|.|+|.++++.+ ++++++|.|+|.|+|||+|+
T Consensus 154 ~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~-~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 154 PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGG-LSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTC-CEEEEEEEEEEEC-------
T ss_pred CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCC-ceeEEEEEEEEEECCCCCCC
Confidence 589999999999999 99999999999999999999876333 78999999999999999995
No 17
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=304.75 Aligned_cols=215 Identities=18% Similarity=0.112 Sum_probs=184.9
Q ss_pred cccccccceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEe------cCCCCCCCceEEECcccEEEECCcCCCCCC
Q psy8639 55 KFKKYLSNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTS------LSPTDHSGAFDIDKSSGSLVVARQLDRETC 128 (570)
Q Consensus 55 ~f~~~~~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~------~~~~~~~~~F~id~~~G~l~~~~~LD~E~~ 128 (570)
.|.+..|.++|+|++++|+.|+++.|+|+|.+ ..+.|+|.. .-.....+.|.|++.+|.|+++++||||..
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g---~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 78 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPE---EVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSW 78 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTT---CCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCC---CcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHh
Confidence 58999999999999999999999999999975 234455520 000014589999999999999999999999
Q ss_pred CeE------------EEEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCc----------CCCCceEEEEeCCCCCCeEE
Q psy8639 129 PEY------------KLEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPR----------WGENPLTIPVNEDTLVGSTI 186 (570)
Q Consensus 129 ~~~------------~l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~----------f~~~~~~~~v~E~~~~gt~v 186 (570)
..| .|+|+|+|.++..+.++++..|.|+|.|+|||+|+ |....|.+.|.|+.++|+.+
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v 158 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFH 158 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEE
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEE
Confidence 999 99999999776333678889999999999999999 99999999999999999999
Q ss_pred EEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEEC-CCCCCCCceeEEEEEEE
Q psy8639 187 WNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQ-AANISERLSTSLTARVV 265 (570)
Q Consensus 187 ~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~-~~~~~~~~~~~~~v~I~ 265 (570)
+++.|+|+|.|.|+.++|+|..+. .++|.|++.+|+|++.++||||....|.|+|.|+|. ++| .++++++|.|+
T Consensus 159 ~~v~A~D~D~g~n~~i~Y~i~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p---~~ss~~~v~I~ 233 (246)
T 2x2u_A 159 QFRLLPVQFLCPQISVAYRLLEGE--GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAR---EEVVMVPFPVT 233 (246)
T ss_dssp ECSCHHHHHHCTTSCEEEEEESCT--TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---C---CEEEEEEEEEE
T ss_pred EEEEEEcCCCCCCcEEEEEEccCC--CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCC---cceEEEEEEEE
Confidence 999999999999999999999864 579999999999999999999999999999999983 443 38999999999
Q ss_pred EeeCCCCCCeee
Q psy8639 266 VKDLNDNAPVFV 277 (570)
Q Consensus 266 V~dvNd~~P~~~ 277 (570)
|.|+|||+|.|.
T Consensus 234 V~DvNDn~P~F~ 245 (246)
T 2x2u_A 234 VYDEDDSAPEFE 245 (246)
T ss_dssp EECSSCCSCCCC
T ss_pred EEEeCCCCCccC
Confidence 999999999984
No 18
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=5.9e-36 Score=283.31 Aligned_cols=205 Identities=27% Similarity=0.411 Sum_probs=188.5
Q ss_pred CCCCcCCCCceE--EEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceE
Q psy8639 162 DNAPRWGENPLT--IPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSF 239 (570)
Q Consensus 162 d~~P~f~~~~~~--~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~ 239 (570)
|++|.|....|. +.|.|++++|+.++++.|+|+|. +.+.|+|..+.. .++|.|++.+|.|++.++||||....|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~-~~~F~Id~~tG~i~~~~~LD~E~~~~y 78 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEA-SRFFAVEPDTGVVWLRQPLDRETKSEF 78 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHH-HHHEEECTTTCEEEESSCCCTTTCCEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCC-CCcEEEeCCCCEEEECCccCCcccceE
Confidence 459999998886 69999999999999999999994 468999987542 468999999999999999999999999
Q ss_pred EEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEe
Q psy8639 240 ILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISG 319 (570)
Q Consensus 240 ~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~ 319 (570)
.|+|.|+|+++ ..++.+.|+|.|+|||+|.|.... |.+.|.|+.+.|+.++++.|+|+|.|.++.++|+|..
T Consensus 79 ~l~v~a~D~~~------~~~~~v~I~V~DvNDn~P~f~~~~--y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~ 150 (210)
T 3mvs_A 79 TVEFSVSDHQG------VITRKVNIQVGDVNDNAPTFHNQP--YSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 150 (210)
T ss_dssp EEEEEEECSSC------EEEEEEEEEEECCCCCCCEECSCS--EEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESS
T ss_pred EEEEEEEeCCC------CEEEEEEEEEEeCCCCCCcCCCce--EEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeC
Confidence 99999999874 457899999999999999998877 8999999999999999999999999999999999986
Q ss_pred CCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEECC-cCCceeEEEEEEEEeeCCCCC
Q psy8639 320 GNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASDHG-IPPKSSSLVINILSETVSTSL 383 (570)
Q Consensus 320 ~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g-~~~~s~~~~v~I~V~dvNd~~ 383 (570)
+ .++|.|++.+|.|++.+.|| ||....|.|+|.|+|+| .|+++++++++|.|.|+||++
T Consensus 151 ~--~~~F~Id~~tG~i~~~~~LD---~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 151 P--SPFFAIDSARGIVTVIQELD---YEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp C--CSSEEECTTTCEEEECSCCC---TTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred C--CCCEEEeCCcEEEEECCcCC---CcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 4 57999999999999999999 99999999999999988 567999999999999999985
No 19
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.3e-35 Score=279.44 Aligned_cols=203 Identities=27% Similarity=0.422 Sum_probs=177.1
Q ss_pred eeEEEeccC--CCCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEE
Q psy8639 283 SLIYVSEQT--RVGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASD 360 (570)
Q Consensus 283 ~~~~v~E~~--~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D 360 (570)
+.+.|.|+. +.|+.++++ |+|+|.| ++.++|+|.++....+|.|++.+|.|++.+.|| ||....|.|+|.|+|
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~v~a~D 80 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLD---REERAQYTLMAQAVD 80 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCC---TTTCSEEEEEEEEEE
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccC---CccCCEEEEEEEEEE
Confidence 578999994 578999988 8999998 788999999875567999999999999999999 999999999999999
Q ss_pred CCc-CCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEE
Q psy8639 361 HGI-PPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIK 439 (570)
Q Consensus 361 ~g~-~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~ 439 (570)
++. +++++.++|.|.|.|+|||+|.|.+..|.+.|.|+.++|+.|+++.|+|+|..
T Consensus 81 ~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~----------------------- 137 (215)
T 2a4e_A 81 RDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDP----------------------- 137 (215)
T ss_dssp TTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCT-----------------------
T ss_pred CCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCC-----------------------
Confidence 875 56788999999999999999999999999999999999999999999999950
Q ss_pred EEeeCCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEc-ccCCccccceEEEEEEEEeCCC---CCeeE
Q psy8639 440 VVARSPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLA-RSLDRETVDQYNLVVHVTDSKS---GDYDT 515 (570)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~l~V~atD~~~---~~~~~ 515 (570)
. -|.++.++|+|..+. ..|.|++.+|.|++. +.||||....|.|.|+|+|++. +++++
T Consensus 138 -----~-----------~G~n~~i~Y~i~~~~--~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~ 199 (215)
T 2a4e_A 138 -----T-----------YGNSAKLVYSILEGQ--PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGT 199 (215)
T ss_dssp -----T-----------TCSSSCCEEEEEEST--TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEE
T ss_pred -----C-----------CCCceEEEEEEeCCC--CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeE
Confidence 0 046789999998763 689999999999999 9999999999999999999986 37899
Q ss_pred EEEEEEEEecCCCCcc
Q psy8639 516 TNVFITILDVNDNAPE 531 (570)
Q Consensus 516 ~~v~I~V~dvNd~~P~ 531 (570)
++|+|+|.|+|||+|+
T Consensus 200 ~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 200 TKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEEEEEEC-------
T ss_pred EEEEEEEEECCCCCCC
Confidence 9999999999999995
No 20
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=296.54 Aligned_cols=213 Identities=17% Similarity=0.123 Sum_probs=185.7
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEeEEecCCCCC--CceEE------EEEEecCCCCCcEEEeCCCcEEEEcccCCccCcc
Q psy8639 166 RWGENPLTIPVNEDTLVGSTIWNFTATDADDGS--NGELR------YGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLT 237 (570)
Q Consensus 166 ~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~--~~~~~------y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~ 237 (570)
.|.+..|.+.|.|++++|+.|+++.|+|+|.|. +..+. |++..+ ..++|.|++.+|.|++.++||||...
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~ 79 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH--ENNWIRIQEDTGLLYLQRSLDHSSWE 79 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE--ECCSEEECTTTCEEEESSCBCHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC--CCCEEEECCCcEEEEECCcCChhHhh
Confidence 478889999999999999999999999999754 44454 555544 24799999999999999999999999
Q ss_pred eE------------EEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCe----------eecCCCCeeEEEeccCCCCe
Q psy8639 238 SF------------ILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPV----------FVSPTRGSLIYVSEQTRVGS 295 (570)
Q Consensus 238 ~~------------~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~----------~~~~~~~~~~~v~E~~~~g~ 295 (570)
.| .|+|.|+|++.+... .+++++|.|+|.|+|||+|. |.... |.+.|.|+.++|+
T Consensus 80 ~y~~~~~G~p~~~~~l~V~a~D~g~~~~~-~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~--y~~~v~En~~~Gt 156 (246)
T 2x2u_A 80 KLSVRNRGFPLLTVYLKVFLSPTSLREGE-CQWPGCARVYFSFFNTSFPACSSLKPRELCFPETR--PSFRIRENRPPGT 156 (246)
T ss_dssp HHHHTSTTSCCCEEEEEEECC-------C-CCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSC--CCEEEEBTSCCCE
T ss_pred hhccccCCCcccceEEEEEEEcCCCCCCc-ccceEEEEEEEEECCCCCCccccccccccccCCCc--EEEEEECCCCCCc
Confidence 99 999999999876322 67789999999999999999 98876 8999999999999
Q ss_pred EEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEE-CCcCCceeEEEEEE
Q psy8639 296 HVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASD-HGIPPKSSSLVINI 374 (570)
Q Consensus 296 ~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D-~g~~~~s~~~~v~I 374 (570)
.++++.|+|+|.|.|+.++|+|..++ ..+|.|++.+|.|++.+.|| ||....|.|+|.|+| .|.|+++++++|.|
T Consensus 157 ~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~V~A~d~dg~p~~ss~~~v~I 232 (246)
T 2x2u_A 157 FHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWALD---REQREKYELVAVCTVHAGAREEVVMVPFPV 232 (246)
T ss_dssp EEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSCBC---TTTCSEEEEEEEEEEC---CCEEEEEEEEE
T ss_pred EEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCccC---ccccceEEEEEEEEecCCCCcceEEEEEEE
Confidence 99999999999999999999999874 78999999999999999999 999999999999998 66688999999999
Q ss_pred EEeeCCCCCCeec
Q psy8639 375 LSETVSTSLPTFL 387 (570)
Q Consensus 375 ~V~dvNd~~P~f~ 387 (570)
.|.|+|||+|.|.
T Consensus 233 ~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 233 TVYDEDDSAPEFE 245 (246)
T ss_dssp EEECSSCCSCCCC
T ss_pred EEEEeCCCCCccC
Confidence 9999999999996
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=8e-34 Score=269.20 Aligned_cols=203 Identities=31% Similarity=0.440 Sum_probs=180.2
Q ss_pred ceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCC-CCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEeC
Q psy8639 62 NNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSP-TDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALDT 140 (570)
Q Consensus 62 ~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~-~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D~ 140 (570)
.++|+||++ |+.++++.+.|.|.+ .++.++|+|.+... ....+.|.|++.+|.|+++++||||....|.|+|+|+|.
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~-~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 83 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDI 83 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGG-GTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCC-CCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEEC
Confidence 468999999 888888889888877 68999999943211 124689999999999999999999999999999999997
Q ss_pred CCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCC--CCCceEEEEEEecCC---CCCc
Q psy8639 141 STSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADD--GSNGELRYGLVRQYP---EGNH 215 (570)
Q Consensus 141 ~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--g~~~~~~y~l~~~~~---~~~~ 215 (570)
++ +.++.+..|+|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+|. |.|+.++|+|..+.+ ..+.
T Consensus 84 g~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~ 161 (215)
T 2qvi_A 84 NG--NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNM 161 (215)
T ss_dssp TT--CCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTC
T ss_pred CC--CceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCe
Confidence 76 6788999999999999999999999999999999999999999999999997 789999999998764 3579
Q ss_pred EEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 216 FSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 216 F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
|.|++.+|.|++. ++||||....|.|.|.|+|.++++...++++++|.|+|.|
T Consensus 162 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 162 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 9999999999995 7999999999999999999987633237899999999986
No 22
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=2.6e-33 Score=265.86 Aligned_cols=198 Identities=30% Similarity=0.449 Sum_probs=177.0
Q ss_pred ceeecCCCC--CCeEEEEEEEEcCCCCCCCceEEEEEEecCC-CCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 62 NNEIKEDVP--IGFTVGNVVSTDSTGRAGGGHVMYSLTSLSP-TDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 62 ~~~v~E~~~--~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~-~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
.++|+||.+ .|+.|+++.| |.| .++.++|+|.+... .+..+.|.|++.+|.|++.++||||....|.|+|+|+
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d---~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRD---KETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAV 81 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGG---GTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCC---CCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEE
Confidence 468999998 7899999999 877 47899999954221 2345699999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCC---CCceEEEEEEecCC---C
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDG---SNGELRYGLVRQYP---E 212 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g---~~~~~~y~l~~~~~---~ 212 (570)
|.++ +.++.+..++|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+|.| .|+.++|+|..+.+ .
T Consensus 82 D~~~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~ 159 (213)
T 3qrb_A 82 SSNG--EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPH 159 (213)
T ss_dssp ETTS--CBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSC
T ss_pred eCCC--CcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCc
Confidence 9776 56788899999999999999999999999999999999999999999999988 88999999998754 3
Q ss_pred CCcEEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 213 GNHFSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 213 ~~~F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
.+.|.|++.+|.|++. ++||||....|.|.|.|+|.+++. ++++++|.|+|.|
T Consensus 160 ~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~---~s~t~~v~I~V~D 213 (213)
T 3qrb_A 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG---LSTTAKAVITVKD 213 (213)
T ss_dssp SCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTS---CEEEEEEEEEEEC
T ss_pred CCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCC---ceEEEEEEEEEEC
Confidence 4699999999999997 799999999999999999988764 8999999999986
No 23
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.3e-32 Score=261.96 Aligned_cols=199 Identities=34% Similarity=0.474 Sum_probs=175.5
Q ss_pred ceeecCCCCCC--eEEEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 62 NNEIKEDVPIG--FTVGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 62 ~~~v~E~~~~g--t~v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
.++|+||.+.| +.++++.|+|+| ..++|+|.+.. ..+..+.|.|++.+|.|+++++||||....|.|+|+|+
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d-----~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRP-----EGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCC-----TTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCC-----ceEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence 46899999988 889999998876 27899995432 23456899999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCC--CCCceEEEEEEecCCCC---
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADD--GSNGELRYGLVRQYPEG--- 213 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--g~~~~~~y~l~~~~~~~--- 213 (570)
|.++ +.++++..|+|+|.|+|||+|.|....|.+.|.|+++.|+.++++.|+|+|. |.|+.++|+|..+.+..
T Consensus 82 D~g~--~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~ 159 (218)
T 3k5r_A 82 DASG--KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSP 159 (218)
T ss_dssp CSSS--CEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCS
T ss_pred ECCC--CceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcC
Confidence 9765 6688999999999999999999999999999999999999999999999998 78999999999876532
Q ss_pred CcEEEeCCCcEEEEc---ccCCccC--cceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 214 NHFSVDHLTGTLTLL---QPLDYET--LTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 214 ~~F~Id~~~G~i~~~---~~lD~e~--~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
++|.|++.+|.|++. ++||||. ...|.|.|.|+|+++... .++++++|+|+|.|
T Consensus 160 ~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p-~~sst~~v~I~V~D 218 (218)
T 3k5r_A 160 NMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDV-GLTGTATATIVIDD 218 (218)
T ss_dssp CSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTT-TCEEEEEEEEEEEC
T ss_pred CEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCC-CeeEEEEEEEEEEC
Confidence 689999999999987 6999999 669999999999983221 28999999999986
No 24
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=6.4e-32 Score=253.88 Aligned_cols=193 Identities=23% Similarity=0.389 Sum_probs=171.2
Q ss_pred cceeecCCCCCC--eEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 61 SNNEIKEDVPIG--FTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 61 ~~~~v~E~~~~g--t~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
..++|+||.+.| +.++++. +|+|.+ .. +|+|.+ ....+.|.|++.+|.|+++++||||....|.|+|+|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g---~~-~Y~i~~---~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 76 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNK---NA-MYIIEG---ESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHII 76 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCT---TE-EEEEEE---TTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCC---Cc-EEEEec---CCCCCeEEEECCcCEEEECccccccccceEEEEEEEE
Confidence 346899999988 8999998 999966 33 999943 3445799999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCC---CCCCceEEEEEEecCCCCCc
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDAD---DGSNGELRYGLVRQYPEGNH 215 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D---~g~~~~~~y~l~~~~~~~~~ 215 (570)
|.+++ +.++++..++|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+| .|.|+.++|+|..+. ..
T Consensus 77 D~g~~-~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~---~~ 152 (203)
T 3ppe_A 77 DRRNN-RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN---EY 152 (203)
T ss_dssp ETTTT-EECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST---TT
T ss_pred ECCCC-CcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC---Cc
Confidence 97652 357788999999999999999999999999999999999999999999999 578999999999864 49
Q ss_pred EEEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 216 FSVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 216 F~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
|.|+ .+|.|++. ++||||....|.|.|.|+|.++.+ .++++++|.|+|.|
T Consensus 153 F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p--~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 153 FTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLT--GESSTATVIIRLTD 203 (203)
T ss_dssp EEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCC--CSSSEEEEEEEEEC
T ss_pred EEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCC--CCeEEEEEEEEEEC
Confidence 9999 89999999 999999999999999999984432 27889999999986
No 25
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.7e-32 Score=260.00 Aligned_cols=197 Identities=24% Similarity=0.318 Sum_probs=180.3
Q ss_pred EEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecC---CCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECC
Q psy8639 173 TIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQY---PEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQA 249 (570)
Q Consensus 173 ~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~---~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~ 249 (570)
.+.|+|+++ |+.++.+.+.|.|.+.++.++|+|.++. +..+.|.|++.+|.|++.++||||....|.|+|.|+|.+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 578999998 8888899999999888999999999753 235799999999999999999999999999999999998
Q ss_pred CCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCC--CCCeEEEEEEEeCC----CC
Q psy8639 250 ANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDS--GDNGRVTYVISGGN----ED 323 (570)
Q Consensus 250 ~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~ysi~~~~----~~ 323 (570)
++. +++++.+.|+|.|+|||+|.|.... |.+.|.|+++.|+.++++.|+|+|. +.|+.++|+|..++ ..
T Consensus 85 ~~~---~~~~~~v~I~V~DvNDn~P~F~~~~--y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~ 159 (215)
T 2qvi_A 85 GNQ---VENPIDIVINVIDMNDNRPEFLHQV--WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSP 159 (215)
T ss_dssp TCC---CEEEEEEEEEEECCCCCCCBCSSSE--EEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSST
T ss_pred CCc---eeeeEEEEEEEeECCCCCCcccCce--eEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcC
Confidence 864 7889999999999999999998876 8999999999999999999999998 78999999999876 46
Q ss_pred CcEEEecCCCEEEEE-eecCcccccceeEEEEEEEEEECCcC---CceeEEEEEEEEee
Q psy8639 324 ARFHLDHDKGILSLA-RVISEYDHQSKFRAVLNITASDHGIP---PKSSSLVINILSET 378 (570)
Q Consensus 324 ~~F~id~~tG~l~~~-~~ld~~d~e~~~~~~l~V~a~D~g~~---~~s~~~~v~I~V~d 378 (570)
+.|.|++.+|.|++. +.|| ||....|.|.|.|+|+|.| +++++++|.|+|.|
T Consensus 160 ~~F~Id~~tG~i~~~~~~LD---~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 160 NMFTINNETGDIITVAAGLD---REKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp TCEEECTTTCEEEECSCCCC---TTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CeEEEcCCCcEEEEecCCCC---cccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 899999999999995 7898 9999999999999999877 78999999999986
No 26
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=5.5e-33 Score=262.32 Aligned_cols=196 Identities=28% Similarity=0.422 Sum_probs=168.3
Q ss_pred ceeecCCCCCC--eEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEe
Q psy8639 62 NNEIKEDVPIG--FTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALD 139 (570)
Q Consensus 62 ~~~v~E~~~~g--t~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D 139 (570)
.++|+||.+.+ +.++++ |+|+|.+ ++.++|+| . +....+.|.|++.+|.|+++++||||....|.|+|+|+|
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g--~~~i~Y~l--~-~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 79 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG--DGSLKYIL--S-GDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVN 79 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS--STTBCCCC--C-SSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CB
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC--CceEEEEE--E-CCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEE
Confidence 35799998854 688888 8999987 56799999 2 234456999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCC---CCCceEEEEEEecCCCCCcE
Q psy8639 140 TSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADD---GSNGELRYGLVRQYPEGNHF 216 (570)
Q Consensus 140 ~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---g~~~~~~y~l~~~~~~~~~F 216 (570)
.++. ++++.+..++|+|.|+|||+|.|....|.+.|.|+.+.|+.++++.|+|+|. |.|+.++|+|..+. ..|
T Consensus 80 ~~~~-~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~---~~F 155 (207)
T 3lnd_A 80 RRTG-RPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ---PYF 155 (207)
T ss_dssp SSSC-CCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG---GGE
T ss_pred CCCC-CccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC---CCE
Confidence 7632 5578888999999999999999999999999999999999999999999997 88899999999864 499
Q ss_pred EEeCCCcEEEEc-ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 217 SVDHLTGTLTLL-QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 217 ~Id~~~G~i~~~-~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
.|++.+|.|++. ++||||....|.|.|.|+|+++++.+ ++++++|+|+|.|
T Consensus 156 ~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~-~s~t~~v~I~V~D 207 (207)
T 3lnd_A 156 SVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGG-LSGTTTVNITLTD 207 (207)
T ss_dssp EECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTC-BEEEEEEEEEEEC
T ss_pred EEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCC-cEeEEEEEEEEeC
Confidence 999999999999 99999999999999999999865333 7999999999986
No 27
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.6e-31 Score=251.11 Aligned_cols=190 Identities=23% Similarity=0.358 Sum_probs=175.4
Q ss_pred eeEEEeccCCCC--eEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEE
Q psy8639 283 SLIYVSEQTRVG--SHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASD 360 (570)
Q Consensus 283 ~~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D 360 (570)
..+.|.|+.+.| ..++++. +|+|.|.+ +|+|.+++..++|.|++.+|.|++.+.|| ||....|.|+|.|+|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~v~a~D 77 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLD---REKKAEYELTAHIID 77 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCC---TTTCCEEEEEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECcccc---ccccceEEEEEEEEE
Confidence 468999999988 8889988 99998776 99999887788999999999999999999 999999999999999
Q ss_pred CCcC-CceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCC---CCCCceEEEEEEeeccCCCceE
Q psy8639 361 HGIP-PKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPS---TYGNYVYTEVFLVSEDAIPGTY 436 (570)
Q Consensus 361 ~g~~-~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D---~~~~~~~~~~~~v~~~~~~~~~ 436 (570)
+|.| ++++.+.|.|.|.|+|||+|.|....|.+.|.|++++|+.|+++.|+|+| .
T Consensus 78 ~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~--------------------- 136 (203)
T 3ppe_A 78 RRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTV--------------------- 136 (203)
T ss_dssp TTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTS---------------------
T ss_pred CCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCC---------------------
Confidence 9876 57888999999999999999999999999999999999999999999999 4
Q ss_pred EEEEEeeCCCceeEEEEEeecCCCceEEEEecCCCCCCcEEEeCCCcEEEEc-ccCCccccceEEEEEEEEeCCC--CCe
Q psy8639 437 IIKVVARSPSTYVYHMYLISDFSGYNLTYMIPAGVADDMFKIDAETGVVTLA-RSLDRETVDQYNLVVHVTDSKS--GDY 513 (570)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~l~V~atD~~~--~~~ 513 (570)
+.++.++|+|.++. ..|.|+ .+|.|++. +.||||....|.|.|+|+|+++ +++
T Consensus 137 ---------------------g~n~~i~Y~i~~~~--~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s 192 (203)
T 3ppe_A 137 ---------------------AGHATVTYQIIKGN--EYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGES 192 (203)
T ss_dssp ---------------------SSTTCEEEEEEEST--TTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSS
T ss_pred ---------------------CCceEEEEEEeCCC--CcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCe
Confidence 67889999998764 599999 89999999 9999999999999999999854 578
Q ss_pred eEEEEEEEEEe
Q psy8639 514 DTTNVFITILD 524 (570)
Q Consensus 514 ~~~~v~I~V~d 524 (570)
++++|+|+|.|
T Consensus 193 ~t~~v~I~V~D 203 (203)
T 3ppe_A 193 STATVIIRLTD 203 (203)
T ss_dssp SEEEEEEEEEC
T ss_pred EEEEEEEEEEC
Confidence 99999999987
No 28
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=5.6e-32 Score=256.74 Aligned_cols=194 Identities=24% Similarity=0.400 Sum_probs=177.3
Q ss_pred eeEEEeccCC--CCeEEEEEEEEeCCCCCCeEEEEEEEeC----CCCCcEEEecCCCEEEEEeecCcccccceeEEEEEE
Q psy8639 283 SLIYVSEQTR--VGSHVTKMTAVDQDSGDNGRVTYVISGG----NEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNI 356 (570)
Q Consensus 283 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~ysi~~~----~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V 356 (570)
..+.|.|+.+ .++.++++.| |.|. ++.++|+|.+. +..++|.|++.+|.|++.+.|| ||....|.|+|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~v 78 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLD---REAIAKYILYS 78 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCC---TTTCSEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccC---cccCceEEEEE
Confidence 3689999998 6788999998 7775 88899999974 3356999999999999999999 99999999999
Q ss_pred EEEECCcCCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceE
Q psy8639 357 TASDHGIPPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTY 436 (570)
Q Consensus 357 ~a~D~g~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~ 436 (570)
.|+|++.+++++.++|.|.|.|+|||+|.|.+..|.+.|.|++++|+.|+++.|+|+|.
T Consensus 79 ~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~--------------------- 137 (213)
T 3qrb_A 79 HAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADD--------------------- 137 (213)
T ss_dssp EEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC---------------------
T ss_pred EEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCC---------------------
Confidence 99999988889999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCceeEEEEEeecC---CCceEEEEecCCC----CCCcEEEeCCCcEEEEc-ccCCccccceEEEEEEEEeC
Q psy8639 437 IIKVVARSPSTYVYHMYLISDF---SGYNLTYMIPAGV----ADDMFKIDAETGVVTLA-RSLDRETVDQYNLVVHVTDS 508 (570)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~y~i~~~~----~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~l~V~atD~ 508 (570)
+ .|+.++|+|.++. ..+.|.|++.+|.|++. +.||||....|.|.|+|+|+
T Consensus 138 ---------------------~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~ 196 (213)
T 3qrb_A 138 ---------------------DVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADL 196 (213)
T ss_dssp ---------------------TTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETG
T ss_pred ---------------------CCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeC
Confidence 6 7889999997654 35789999999999997 79999999999999999998
Q ss_pred CC-CCeeEEEEEEEEEe
Q psy8639 509 KS-GDYDTTNVFITILD 524 (570)
Q Consensus 509 ~~-~~~~~~~v~I~V~d 524 (570)
++ +++++++|+|+|.|
T Consensus 197 g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 197 QGEGLSTTAKAVITVKD 213 (213)
T ss_dssp GGTSCEEEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEEEC
Confidence 76 78999999999987
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.98 E-value=3.8e-31 Score=251.91 Aligned_cols=195 Identities=24% Similarity=0.344 Sum_probs=175.7
Q ss_pred eEEEEeCCCCCC--eEEEEeEEecCCCCCCceEEEEEEecC---CCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEE
Q psy8639 172 LTIPVNEDTLVG--STIWNFTATDADDGSNGELRYGLVRQY---PEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVT 246 (570)
Q Consensus 172 ~~~~v~E~~~~g--t~v~~v~a~D~D~g~~~~~~y~l~~~~---~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~ 246 (570)
..+.|.|+.+.| +.++++.|.|.|. .++|+|.... ...+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus 6 ~~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CCEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence 367899999988 8899999998874 6999998642 225799999999999999999999999999999999
Q ss_pred ECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCC--CCCeEEEEEEEeCCCC-
Q psy8639 247 DQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDS--GDNGRVTYVISGGNED- 323 (570)
Q Consensus 247 D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~ysi~~~~~~- 323 (570)
|.+++. +++++.+.|+|.|+|||+|.|.... |.+.|.|+++.|+.++++.|+|+|. +.|+.++|+|..+...
T Consensus 82 D~g~~~---~~~~~~v~I~V~DvNDn~P~F~~~~--y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~ 156 (218)
T 3k5r_A 82 DASGKT---LEGPVPLEVIVIDQNDNRPIFREGP--YIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDK 156 (218)
T ss_dssp CSSSCE---EEEEEEEEEEEECTTCCCCCCCSCS--EEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCC
T ss_pred ECCCCc---eeeeEEEEEEEEeCCCCCCcccCCc--eEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCC
Confidence 988764 7889999999999999999998877 8999999999999999999999998 6799999999976543
Q ss_pred ---CcEEEecCCCEEEEE---eecCcccccc--eeEEEEEEEEEECC--cCCceeEEEEEEEEee
Q psy8639 324 ---ARFHLDHDKGILSLA---RVISEYDHQS--KFRAVLNITASDHG--IPPKSSSLVINILSET 378 (570)
Q Consensus 324 ---~~F~id~~tG~l~~~---~~ld~~d~e~--~~~~~l~V~a~D~g--~~~~s~~~~v~I~V~d 378 (570)
++|.|++.+|.|++. +.|| ||. ...|.|.|.|+|+| .|+++++++|+|+|.|
T Consensus 157 ~~~~~F~Id~~tG~i~~~~~~~~LD---~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 157 PSPNMFYIDPEKGDIVTVVSPALLD---RETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp SCSCSEEECTTTCEEEECSCGGGCC---GGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CcCCEEEEECCccEEEEeccCCCCC---ccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 689999999999987 5788 999 77999999999999 8899999999999986
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.97 E-value=1.6e-31 Score=252.22 Aligned_cols=193 Identities=25% Similarity=0.385 Sum_probs=167.7
Q ss_pred EEEEeCCCCCC--eEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECCC
Q psy8639 173 TIPVNEDTLVG--STIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQAA 250 (570)
Q Consensus 173 ~~~v~E~~~~g--t~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~ 250 (570)
++.|.|+.+.+ +.++++ |+|+|.| ++.++|+|..+. ..++|.|++.+|.|++.++||||....|.|+|.|+|+++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 82 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDG-AGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRT 82 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSS-BTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCC-CCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCC
Confidence 56899998855 588888 9999988 678999998654 246999999999999999999999999999999999874
Q ss_pred -CCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCC---CCCeEEEEEEEeCCCCCcE
Q psy8639 251 -NISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDS---GDNGRVTYVISGGNEDARF 326 (570)
Q Consensus 251 -~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~ysi~~~~~~~~F 326 (570)
++ ++.++.+.|+|.|+|||+|.|.... |.+.|.|+++.|+.++++.|+|+|. |.|+.++|+|..+ ..+|
T Consensus 83 ~~~---~~~~~~v~I~V~DvNDn~P~F~~~~--y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~--~~~F 155 (207)
T 3lnd_A 83 GRP---VEPESEFIIKIHDINDNEPIFTKDV--YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG--QPYF 155 (207)
T ss_dssp CCC---CSCCCCCEEEEECCSCCCCEESCSE--EEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES--GGGE
T ss_pred CCc---cccEEEEEEEECccCCCCCccCCCc--eEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC--CCCE
Confidence 32 6778899999999999999999876 8999999999999999999999998 7888999999986 4599
Q ss_pred EEecCCCEEEEE-eecCcccccceeEEEEEEEEEECCcC--CceeEEEEEEEEee
Q psy8639 327 HLDHDKGILSLA-RVISEYDHQSKFRAVLNITASDHGIP--PKSSSLVINILSET 378 (570)
Q Consensus 327 ~id~~tG~l~~~-~~ld~~d~e~~~~~~l~V~a~D~g~~--~~s~~~~v~I~V~d 378 (570)
.|++.+|.|++. +.|| ||....|.|.|.|+|+|.| +++++++|+|+|.|
T Consensus 156 ~Id~~tG~i~~~~~~lD---~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 156 SVESETGIIKTALLNMD---RENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EECTTTCEEEECCSSCC---C--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEcCCCcEEEECcccCC---cccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 999999999998 8899 9999999999999999876 78999999999986
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.96 E-value=3.6e-29 Score=240.47 Aligned_cols=204 Identities=26% Similarity=0.339 Sum_probs=167.8
Q ss_pred cceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEEC---CcCCCCCCCeEEEEEEE
Q psy8639 61 SNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVA---RQLDRETCPEYKLEVRA 137 (570)
Q Consensus 61 ~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~---~~LD~E~~~~~~l~v~a 137 (570)
+.++|+|+++.|+.+..+.+.+.+....+..++|+|.. .....|.|++.+|.+++. +.||||....|.+.+.+
T Consensus 22 ~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~----~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~ 97 (242)
T 4apx_B 22 TIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD----NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQ 97 (242)
T ss_dssp EEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES----CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEE
T ss_pred EEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec----CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEE
Confidence 45679999999999887555544433278899999932 346789999999999875 67999998776555444
Q ss_pred EeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEE-----eEEecCCCCCCceEEEEEEecCCC
Q psy8639 138 LDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWN-----FTATDADDGSNGELRYGLVRQYPE 212 (570)
Q Consensus 138 ~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~-----v~a~D~D~g~~~~~~y~l~~~~~~ 212 (570)
.+.............|+|.|.|+|||+|+|....|.+.|.|+.++|+.|.+ +.|+|+|.|.|+.++|+|..+...
T Consensus 98 v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~ 177 (242)
T 4apx_B 98 VQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPED 177 (242)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTS
T ss_pred EEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCC
Confidence 442222234567788999999999999999999999999999999999976 789999999999999999986542
Q ss_pred ---CCcEEEeC-CCcEEEEcccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 213 ---GNHFSVDH-LTGTLTLLQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 213 ---~~~F~Id~-~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
.+.|.|++ .+|.|++.++||||....|.|.|+|+|+|+++..++++.+.|+|+|+-
T Consensus 178 ~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 178 PTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp TTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred cccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 24799985 589999999999999999999999999998876667888999999875
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=6.4e-27 Score=224.81 Aligned_cols=197 Identities=22% Similarity=0.316 Sum_probs=164.8
Q ss_pred ceEEEEeCCCCCCeEEEEeEEec-CCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEc---ccCCccCcceEEEEE---
Q psy8639 171 PLTIPVNEDTLVGSTIWNFTATD-ADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLL---QPLDYETLTSFILVV--- 243 (570)
Q Consensus 171 ~~~~~v~E~~~~gt~v~~v~a~D-~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~---~~lD~e~~~~~~l~v--- 243 (570)
.+.+.|.|+++.|+.+..+.+.+ .|.+.++.++|+|.+.. ..+|.|++.+|.+.+. +.||+|....|.+.+
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~--~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v 98 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNV--DYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQV 98 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCG--GGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEE
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCC--CceEEECCCCCEEEEEecCCceeccCCCceEEEEEEE
Confidence 46789999999999988755544 45778899999998753 4689999999999875 679999977665444
Q ss_pred EEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEE-----EEEEeCCCCCCeEEEEEEE
Q psy8639 244 KVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTK-----MTAVDQDSGDNGRVTYVIS 318 (570)
Q Consensus 244 ~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~-----v~a~D~D~~~~~~i~ysi~ 318 (570)
.+.+.... ....+.|.|.|.|+|||+|.|.... |.+.|.|++++|+.|.+ +.|+|+|.|.|+.++|+|.
T Consensus 99 ~~~~~~~~----~~~~~~V~I~V~DvNDn~P~F~~~~--y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~ 172 (242)
T 4apx_B 99 QCVNKKVG----TVIYHEVRIVVRDRNDNSPTFKHES--YYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQ 172 (242)
T ss_dssp EEEETTTC----CEEEEEEEEEEECCCCCCCEESSSC--EEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEE
T ss_pred EeECCCCC----eEEEEEEEEEEEeCCCCCCccccee--eeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEe
Confidence 44454321 5667889999999999999999887 89999999999999976 7899999999999999999
Q ss_pred eCCCC----CcEEEec-CCCEEEEEeecCcccccceeEEEEEEEEEECCcCC---ceeEEEEEEEEee
Q psy8639 319 GGNED----ARFHLDH-DKGILSLARVISEYDHQSKFRAVLNITASDHGIPP---KSSSLVINILSET 378 (570)
Q Consensus 319 ~~~~~----~~F~id~-~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~~~---~s~~~~v~I~V~d 378 (570)
.+... +.|.|+. .+|.|++.+.|| ||....|.|.|.|+|+|.|+ +++.++|+|+|.-
T Consensus 173 ~~~~~~~~~~~F~Id~~~tG~i~~~~~LD---~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 173 YNPEDPTSNDTFEIPLMLTGNVVLRKRLN---YEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CCTTSTTHHHHEECSSTTTCCEEECSCCC---TTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred cCCCCcccccceEEcCCCceEEEECCcCC---hhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 87543 4699985 589999999999 99999999999999999874 6788888888864
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=185.13 Aligned_cols=117 Identities=26% Similarity=0.379 Sum_probs=108.9
Q ss_pred EEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCC-CCcEEEeCCCcEEEEcccCCc
Q psy8639 155 IEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPE-GNHFSVDHLTGTLTLLQPLDY 233 (570)
Q Consensus 155 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~-~~~F~Id~~~G~i~~~~~lD~ 233 (570)
++|.|+|||+|.|....|.+.|.|+++.|+.++++.|+|+|.|.|+.++|+|..+... .++|.|++.+|.|++.++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 5689999999999999999999999999999999999999999999999999876422 358999999999999999999
Q ss_pred cCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCC
Q psy8639 234 ETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAP 274 (570)
Q Consensus 234 e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P 274 (570)
|....|.|+|.|+|++.+. ++++++|.|+|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p~---~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPP---KTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTB---CCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCC---cEEEEEEEEEEEeccCCCC
Confidence 9999999999999998764 7899999999999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=5.2e-24 Score=182.07 Aligned_cols=115 Identities=25% Similarity=0.423 Sum_probs=107.6
Q ss_pred EEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEE
Q psy8639 374 ILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMY 453 (570)
Q Consensus 374 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (570)
++|.|+|||+|.|.+..|.+.|.|++++|+.|+++.|+|+|.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~-------------------------------------- 43 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDV-------------------------------------- 43 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSS--------------------------------------
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCC--------------------------------------
Confidence 468999999999999999999999999999999999999999
Q ss_pred EeecCCCceEEEEecCCCC--CCcEEEeCCCcEEEEcccCCccccceEEEEEEEEeCCC-CCeeEEEEEEEEEecCCCCc
Q psy8639 454 LISDFSGYNLTYMIPAGVA--DDMFKIDAETGVVTLARSLDRETVDQYNLVVHVTDSKS-GDYDTTNVFITILDVNDNAP 530 (570)
Q Consensus 454 ~~~~~~~~~~~y~i~~~~~--~~~F~Id~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~-~~~~~~~v~I~V~dvNd~~P 530 (570)
+.++.++|+|..+.. .++|.|++.+|.|++++.||||....|.|+|+|+|++. +++++++|+|+|.|+|||+|
T Consensus 44 ----g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 44 ----GVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp ----SCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ----CCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 889999999987643 36899999999999999999999999999999999987 57899999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=3.6e-22 Score=168.94 Aligned_cols=111 Identities=30% Similarity=0.418 Sum_probs=101.9
Q ss_pred EEEeeCCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCC--CCCcEEEeCCCcEEEEcccCC
Q psy8639 155 IEIVDVNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYP--EGNHFSVDHLTGTLTLLQPLD 232 (570)
Q Consensus 155 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~--~~~~F~Id~~~G~i~~~~~lD 232 (570)
|+|.|+|||+|.|....|.+.|.|+.++|+.++++.|+|+|.|.|+.++|+|....+ ..++|.|++.+|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 578999999999999999999999999999999999999999999999999986321 246899999999999999999
Q ss_pred ccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCC
Q psy8639 233 YETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLN 270 (570)
Q Consensus 233 ~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvN 270 (570)
||....|.|+|.|+|++++ .++++|.|+|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~-----~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSST-----PARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSS-----CEEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCC-----ceEEEEEEEEEECC
Confidence 9999999999999999874 37789999999997
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=4.9e-22 Score=168.12 Aligned_cols=110 Identities=26% Similarity=0.378 Sum_probs=101.6
Q ss_pred EEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEE
Q psy8639 374 ILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMY 453 (570)
Q Consensus 374 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (570)
|+|.|+|||+|.|.+..|.+.|.|++++|+.|+++.|+|+|.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~-------------------------------------- 43 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI-------------------------------------- 43 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSS--------------------------------------
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCC--------------------------------------
Confidence 468999999999999999999999999999999999999999
Q ss_pred EeecCCCceEEEEecCC---CCCCcEEEeCCCcEEEEcccCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEecC
Q psy8639 454 LISDFSGYNLTYMIPAG---VADDMFKIDAETGVVTLARSLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILDVN 526 (570)
Q Consensus 454 ~~~~~~~~~~~y~i~~~---~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~dvN 526 (570)
+.++.++|+|... ...++|.|++.+|.|+++++||||....|.|+|.|+|++. ..++++|+|+|+|+|
T Consensus 44 ----g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~-~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 44 ----GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSS-TPARATVTINVTDVN 114 (114)
T ss_dssp ----CCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEEESSSS-SCEEEEEEEEEECCC
T ss_pred ----CCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCCcccCcEEEEEEEEEECCC-CceEEEEEEEEEECC
Confidence 8899999999763 2356899999999999999999999999999999999985 348899999999998
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=3.7e-20 Score=158.62 Aligned_cols=115 Identities=24% Similarity=0.348 Sum_probs=101.6
Q ss_pred cccccccccccceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCC
Q psy8639 51 VSRCKFKKYLSNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCP 129 (570)
Q Consensus 51 ~~~p~f~~~~~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~ 129 (570)
.++|.|....|++.+.|++++|+.|+++. +|+|.+ .|+.++|+|.+.. .....+.|.|++.+|.|+++++||||...
T Consensus 7 r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 7 GQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEE-RGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp CSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHH-HTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred ccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCC-CCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 46789999999999999999999999999 699877 6789999995421 11346899999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCC
Q psy8639 130 EYKLEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGE 169 (570)
Q Consensus 130 ~~~l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~ 169 (570)
.|.|+|+|+|.++ +.+++++.|.|+|.|+|||+|.|..
T Consensus 85 ~y~l~V~A~D~g~--p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 85 FFLLTGYALDARG--NNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEEEEEEECTTC--CEEEEEECCEEEEECTTCCCCCCCC
T ss_pred eEEEEEEEEECCC--CceEEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999765 6788999999999999999999975
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.1e-19 Score=155.73 Aligned_cols=115 Identities=25% Similarity=0.347 Sum_probs=104.4
Q ss_pred CCCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecC---CCCCcEEEeCCCcEEEEcccCCccCc
Q psy8639 160 VNDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQY---PEGNHFSVDHLTGTLTLLQPLDYETL 236 (570)
Q Consensus 160 vNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~---~~~~~F~Id~~~G~i~~~~~lD~e~~ 236 (570)
.+.+.|.|....+.+.+.|+.+.|+.|+++. +|.|.|.|+.++|+|..+. +..+.|.|++.+|.|++.++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3578999999999999999999999999999 6999988999999999863 23579999999999999999999999
Q ss_pred ceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeec
Q psy8639 237 TSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVS 278 (570)
Q Consensus 237 ~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~ 278 (570)
..|.|+|.|+|.+.+. +++++.|.|+|.|+|||+|.|..
T Consensus 84 ~~y~l~V~A~D~g~p~---~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 84 PFFLLTGYALDARGNN---VEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp SEEEEEEEEECTTCCE---EEEEECCEEEEECTTCCCCCCCC
T ss_pred ceEEEEEEEEECCCCc---eEEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999998764 78899999999999999999964
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.75 E-value=2e-18 Score=144.85 Aligned_cols=104 Identities=27% Similarity=0.404 Sum_probs=79.2
Q ss_pred ccccceeecCCCCCCeE--EEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCCeEEEE
Q psy8639 58 KYLSNNEIKEDVPIGFT--VGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLE 134 (570)
Q Consensus 58 ~~~~~~~v~E~~~~gt~--v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~ 134 (570)
+-.|.++|+||+++|+. |+++ |.|.+ .++.++|+|.+.. ..+..+.|.|++.+|.|+++++||||....|.|+
T Consensus 4 W~~~~~~v~En~~~gt~~~v~~v---d~D~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~ 79 (110)
T 1ncg_A 4 WVIPPINLPENSRGPFPQELVRI---RSGRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLR 79 (110)
T ss_dssp CCCCCEEECSSCCCCSSEEEEEC---CCGGG-GGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEE
T ss_pred cEeeeEEEeCCCCCCCcEEEEEE---eCCCC-CCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEE
Confidence 34578899999999994 5555 56666 6899999994321 1245689999999999999999999999999999
Q ss_pred EEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcC
Q psy8639 135 VRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRW 167 (570)
Q Consensus 135 v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f 167 (570)
|+|+|.++ +.+++++.|.|.|.|+|||+|.|
T Consensus 80 V~A~D~g~--p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 80 AHAVDING--NQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEECTTS--CBCSCCEEEEEEEC---------
T ss_pred EEEEECCC--CceeeEEEEEEEEEECCCCCCCC
Confidence 99999766 67889999999999999999987
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.72 E-value=1.4e-17 Score=139.60 Aligned_cols=100 Identities=25% Similarity=0.380 Sum_probs=79.4
Q ss_pred ceEEEEeCCCCCCeE--EEEeEEecCCCCCCceEEEEEEecC---CCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEE
Q psy8639 171 PLTIPVNEDTLVGST--IWNFTATDADDGSNGELRYGLVRQY---PEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKV 245 (570)
Q Consensus 171 ~~~~~v~E~~~~gt~--v~~v~a~D~D~g~~~~~~y~l~~~~---~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a 245 (570)
.|.++|.|+++.|+. ++++ |.|.|.|+.++|+|..+. ...+.|.|++.+|.|++.++||||....|.|+|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 467899999999995 5555 677778999999999742 23579999999999999999999999999999999
Q ss_pred EECCCCCCCCceeEEEEEEEEeeCCCCCCee
Q psy8639 246 TDQAANISERLSTSLTARVVVKDLNDNAPVF 276 (570)
Q Consensus 246 ~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~ 276 (570)
+|++.+. +++++.+.|+|.|+|||+|.|
T Consensus 83 ~D~g~p~---~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 83 VDINGNQ---VENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ECTTSCB---CSCCEEEEEEEC---------
T ss_pred EECCCCc---eeeEEEEEEEEEECCCCCCCC
Confidence 9998764 788999999999999999987
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=6.4e-18 Score=144.68 Aligned_cols=107 Identities=23% Similarity=0.273 Sum_probs=89.6
Q ss_pred ccccceeecCCCCCCeEEEEEEEEcCCCCCCCceE---EEEEEecCCCCCCCceEEECcccEEEECCcCCCCCC----Ce
Q psy8639 58 KYLSNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHV---MYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETC----PE 130 (570)
Q Consensus 58 ~~~~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~---~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~----~~ 130 (570)
...|..+|+|++++|+.|+++ |+|.|.+ ...+ +|+|. .+ +..+.|.|++.+|.|+++++||||+. ..
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~--~~~i~~~~Y~i~--~~-~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~ 83 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLS--LRELITRGAQIL--SK-GNKQLLQLEQKSGNLLLKEKLDREELCGSTNP 83 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCC--HHHHHHTTCEEE--CS-SSSCSEEECSSSSEEEESSCCCSTTTCTTCSS
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCC--CCceeeEEEEEe--cC-CCCCeEEEECCccEEEECccccchhhcccCCc
Confidence 345778999999999999999 8998854 2345 89993 32 45689999999999999999999999 99
Q ss_pred EEEEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEE
Q psy8639 131 YKLEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIP 175 (570)
Q Consensus 131 ~~l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~ 175 (570)
|.|.|+|.+.. + . ....|.|+|+|+|||+|.|....|.++
T Consensus 84 y~l~v~a~~~~---p-~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 84 CILHFQVLLKS---P-V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCBCCEEEETT---T-T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEECC---C-C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999999832 2 3 477899999999999999999888654
No 42
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=1.6e-17 Score=142.27 Aligned_cols=107 Identities=21% Similarity=0.220 Sum_probs=91.6
Q ss_pred CeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCCceE---EE
Q psy8639 389 PSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSGYNL---TY 465 (570)
Q Consensus 389 ~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~y 465 (570)
..+.+.|.|+.++|+.|++| |+|.|. +. +.+ .|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~------------------------------------------~~-~~i~~~~Y 46 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGL------------------------------------------SL-RELITRGA 46 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTC------------------------------------------CH-HHHHHTTC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCC------------------------------------------CC-CceeeEEE
Confidence 45678999999999999999 999887 32 334 89
Q ss_pred EecCCCCCCcEEEeCCCcEEEEcccCCcccc----ceEEEEEEEEeCCCCCeeEEEEEEEEEecCCCCcccccCCeeeEE
Q psy8639 466 MIPAGVADDMFKIDAETGVVTLARSLDRETV----DQYNLVVHVTDSKSGDYDTTNVFITILDVNDNAPEFKSGSCYPIT 541 (570)
Q Consensus 466 ~i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~----~~~~l~V~atD~~~~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~~ 541 (570)
+|.++...+.|.||+.+|.|++.+.||||.. ..|.|.|+|.+.. +. ...+|.|+|.|+|||+|+|. +..|.++
T Consensus 47 ~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~-p~-~~~~V~I~V~DvNDN~P~F~-~~~y~vs 123 (125)
T 1wyj_A 47 QILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKS-PV-QFIQGEIQLQDVNDHAPEFM-EDESGPS 123 (125)
T ss_dssp EEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEEETT-TT-EEECCCEEECCCCCCCCCCC-CCCCCCC
T ss_pred EEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEEEECC-CC-eEEEEEEEEEEccCCCCcCC-CcEEEEe
Confidence 9987767789999999999999999999999 9999999999855 44 57889999999999999999 7777654
Q ss_pred e
Q psy8639 542 I 542 (570)
Q Consensus 542 v 542 (570)
+
T Consensus 124 ~ 124 (125)
T 1wyj_A 124 S 124 (125)
T ss_dssp C
T ss_pred c
Confidence 3
No 43
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.61 E-value=5e-15 Score=120.99 Aligned_cols=92 Identities=22% Similarity=0.291 Sum_probs=81.8
Q ss_pred ceEEEEeCCCC--CCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEEC
Q psy8639 171 PLTIPVNEDTL--VGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQ 248 (570)
Q Consensus 171 ~~~~~v~E~~~--~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~ 248 (570)
.+.+.|.||.+ .|+.++++. +|+|.| |+.++|+|..+.. .+.|.|++.+|.|++.++||||....|.|+|.|+|+
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~ 81 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGA-GIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDR 81 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTB-TTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred ccEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCC-CceEEEeCCCCCEEECeecCCccCCeEEEEEEEEEC
Confidence 35789999976 689999999 999999 9999999987543 468999999999999999999999999999999999
Q ss_pred C-CCCCCCceeEEEEEEEEee
Q psy8639 249 A-ANISERLSTSLTARVVVKD 268 (570)
Q Consensus 249 ~-~~~~~~~~~~~~v~I~V~d 268 (570)
+ +++ +++++.|.|+|.|
T Consensus 82 G~~p~---l~~~~~v~I~V~D 99 (99)
T 1zvn_A 82 RTGRP---MEPESEFIIKIQD 99 (99)
T ss_dssp TTCCB---SSCCEEEEEEEEC
T ss_pred CCCCC---cceeEEEEEEEeC
Confidence 8 454 7889999999986
No 44
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.61 E-value=3.3e-15 Score=122.41 Aligned_cols=92 Identities=29% Similarity=0.454 Sum_probs=80.0
Q ss_pred cceeecCCCCC--CeEEEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEE
Q psy8639 61 SNNEIKEDVPI--GFTVGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRA 137 (570)
Q Consensus 61 ~~~~v~E~~~~--gt~v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a 137 (570)
+.++|+||.++ |+.|+++.|+|+|. .++|+|.+.. ..+..+.|.|++.+|.|+++++||||+...|.|+|+|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 79 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP-----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVET 79 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT-----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC-----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEE
Confidence 45689999999 99999999999883 6999995421 2345689999999999999999999999999999999
Q ss_pred EeCCCCCCCceeEEEEEEEEee
Q psy8639 138 LDTSTSSNPQSSAVAIKIEIVD 159 (570)
Q Consensus 138 ~D~~g~~~~~s~~~~v~I~V~d 159 (570)
+|.++ +.++++..|+|+|.|
T Consensus 80 ~D~g~--~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 80 TDENG--KTIEGPVDLEILVID 99 (99)
T ss_dssp ECTTC--CEEEEEEEEEEEEEC
T ss_pred EECCC--CceeeEEEEEEEEEC
Confidence 99766 678889999999986
No 45
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.61 E-value=3.3e-15 Score=122.08 Aligned_cols=91 Identities=21% Similarity=0.303 Sum_probs=83.6
Q ss_pred eeEEEeccCC--CCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEE
Q psy8639 283 SLIYVSEQTR--VGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASD 360 (570)
Q Consensus 283 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D 360 (570)
+.+.|.||.+ .|+.++++. +|+|.| |+.++|+|.++...+.|.|++.+|.|++.++|| ||....|.|+|.|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~V~A~D 80 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLD---REERSQYTLRAQALD 80 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCC---TTTCSEEEEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecC---CccCCeEEEEEEEEE
Confidence 4689999976 689999999 999999 999999999875567899999999999999999 999999999999999
Q ss_pred CC-cCCceeEEEEEEEEee
Q psy8639 361 HG-IPPKSSSLVINILSET 378 (570)
Q Consensus 361 ~g-~~~~s~~~~v~I~V~d 378 (570)
+| .|++++.++|.|.|.|
T Consensus 81 ~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 81 RRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTTCCBSSCCEEEEEEEEC
T ss_pred CCCCCCcceeEEEEEEEeC
Confidence 98 4889999999999986
No 46
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.60 E-value=3.5e-15 Score=121.74 Aligned_cols=91 Identities=19% Similarity=0.306 Sum_probs=81.5
Q ss_pred eeEEEeccCC--CCeEEEEEEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEE
Q psy8639 283 SLIYVSEQTR--VGSHVTKMTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASD 360 (570)
Q Consensus 283 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D 360 (570)
+.+.|.||.+ .|+.++++. +|+|.| |+.++|+|.++...+.|.|++.+|.|++.++|| ||....|.|+|.|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~v~A~D 79 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLD---REEKAEYTLTAQAVD 79 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCC---TTTCSEEEEEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCC---CcCCCeEEEEEEEEE
Confidence 4689999995 899999997 999999 999999999865567899999999999999999 999999999999999
Q ss_pred CCc-CCceeEEEEEEEEee
Q psy8639 361 HGI-PPKSSSLVINILSET 378 (570)
Q Consensus 361 ~g~-~~~s~~~~v~I~V~d 378 (570)
+|. |++++.++|.|.|.|
T Consensus 80 ~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 80 FETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTTCCBSSCCEEEEEEECC
T ss_pred CCCCCCcceeEEEEEEEEC
Confidence 987 778999999999976
No 47
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.59 E-value=8.3e-15 Score=119.53 Aligned_cols=91 Identities=22% Similarity=0.300 Sum_probs=79.2
Q ss_pred eEEEEeCCCC--CCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECC
Q psy8639 172 LTIPVNEDTL--VGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQA 249 (570)
Q Consensus 172 ~~~~v~E~~~--~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~ 249 (570)
+.+.|.||.+ .|+.++++. +|+|.| |+.++|+|..+.. .+.|.|++.+|.|++.++||||....|.|+|.|+|++
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 81 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGA-GTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFE 81 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTB-TTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCC-CCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECC
Confidence 5789999985 899999997 999999 9999999987532 4589999999999999999999999999999999998
Q ss_pred C-CCCCCceeEEEEEEEEee
Q psy8639 250 A-NISERLSTSLTARVVVKD 268 (570)
Q Consensus 250 ~-~~~~~~~~~~~v~I~V~d 268 (570)
. ++ +++++.+.|.|.|
T Consensus 82 ~~~~---l~~~~~v~I~V~D 98 (98)
T 1zxk_A 82 TNKP---LEPPSEFIIKVQD 98 (98)
T ss_dssp TCCB---SSCCEEEEEEECC
T ss_pred CCCC---cceeEEEEEEEEC
Confidence 6 43 7888999999876
No 48
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.57 E-value=1e-14 Score=120.82 Aligned_cols=97 Identities=26% Similarity=0.342 Sum_probs=79.5
Q ss_pred ccccceeecCCCC--CCeEEEEEEEEcCCCCCCCceEEEEEEecCC-CCCCCceEEECcccEEEECCcCCCCCCCeEEEE
Q psy8639 58 KYLSNNEIKEDVP--IGFTVGNVVSTDSTGRAGGGHVMYSLTSLSP-TDHSGAFDIDKSSGSLVVARQLDRETCPEYKLE 134 (570)
Q Consensus 58 ~~~~~~~v~E~~~--~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~-~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~ 134 (570)
+....++|+||++ .|+.|+++.|.+ + .|+.++|+|.+... ....+.|.|++.+|.|+++++||||++..|.|+
T Consensus 6 w~~~~~~V~En~~~~~~~~v~~v~Ad~---g-~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~ 81 (105)
T 2omz_B 6 WVIPPISCPENEKGPFPKNLVQIKSNK---D-KEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLF 81 (105)
T ss_dssp EECCCCCEESSCCSSSSEEEEECEEGG---G-GSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEE
T ss_pred EEccCEEEeCCCCCCCCcEEEEEECCC---C-CCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEE
Confidence 3444578999999 588999999933 3 58999999954221 112468999999999999999999999999999
Q ss_pred EEEEeCCCCCCCceeEEEEEEEEeeC
Q psy8639 135 VRALDTSTSSNPQSSAVAIKIEIVDV 160 (570)
Q Consensus 135 v~a~D~~g~~~~~s~~~~v~I~V~dv 160 (570)
|+|+|.++ +.+++++.|.|.|.|+
T Consensus 82 V~A~D~g~--p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 82 SHAVSSNG--NAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEECTTS--CBSSCCEEEEEEEEC-
T ss_pred EEEEECCC--CceeeEEEEEEEEEeC
Confidence 99999766 6788999999999985
No 49
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.57 E-value=1.5e-14 Score=118.66 Aligned_cols=91 Identities=32% Similarity=0.463 Sum_probs=79.2
Q ss_pred ceeecCCCCC--CeEEEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEE
Q psy8639 62 NNEIKEDVPI--GFTVGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRAL 138 (570)
Q Consensus 62 ~~~v~E~~~~--gt~v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~ 138 (570)
.++|+||.+. |+.|+++.|+|+|. .++|+|.+.. ..+..+.|.|++.+|.|++.++||||+...|.|+|+|+
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 81 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC-----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEE
Confidence 4589999998 89999999999983 5899995432 12446899999999999999999999999999999999
Q ss_pred eCCCCCCCceeEEEEEEEEee
Q psy8639 139 DTSTSSNPQSSAVAIKIEIVD 159 (570)
Q Consensus 139 D~~g~~~~~s~~~~v~I~V~d 159 (570)
|.++ +.+++...|.|.|.|
T Consensus 82 D~g~--p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 82 DASG--KTLEGPVPLEVIVID 100 (100)
T ss_dssp CTTC--CEEEEEEEEEEEEEC
T ss_pred ECCC--CcccceEEEEEEEEC
Confidence 9766 778899999999986
No 50
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.57 E-value=2.2e-14 Score=117.51 Aligned_cols=90 Identities=31% Similarity=0.464 Sum_probs=78.3
Q ss_pred eeecCCCCCC--eEEEEEEEEcCCCCCCCceEEEEEEecC-CCCCCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEe
Q psy8639 63 NEIKEDVPIG--FTVGNVVSTDSTGRAGGGHVMYSLTSLS-PTDHSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALD 139 (570)
Q Consensus 63 ~~v~E~~~~g--t~v~~l~a~D~D~~~~~~~~~ysi~~~~-~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D 139 (570)
++|+||.+.| +.|+++.|+|+|. .++|+|.+.. ..+..+.|.|++.+|.|+++++||||+...|.|+|+|+|
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE-----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS-----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC-----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 4799999986 9999999999983 7999995321 123468999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEEEEEee
Q psy8639 140 TSTSSNPQSSAVAIKIEIVD 159 (570)
Q Consensus 140 ~~g~~~~~s~~~~v~I~V~d 159 (570)
.++ +.+++...+.|.|.|
T Consensus 82 ~g~--~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSG--KIIDGPVRLDISVID 99 (99)
T ss_dssp TTS--CEEEEEEEEEEEEEC
T ss_pred CCC--CceeeeEEEEEEEEC
Confidence 766 778999999999986
No 51
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.54 E-value=1.8e-14 Score=117.97 Aligned_cols=89 Identities=15% Similarity=0.239 Sum_probs=81.6
Q ss_pred eeEEEeccCCC--CeEEEEEEEEeCCCCCCeEEEEEEEe----CCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEE
Q psy8639 283 SLIYVSEQTRV--GSHVTKMTAVDQDSGDNGRVTYVISG----GNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNI 356 (570)
Q Consensus 283 ~~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~ysi~~----~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V 356 (570)
..+.|.||.+. |+.++++.|+|+|. .++|+|.+ ++..+.|.|++.+|.|++.++|| ||....|.|+|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~V 77 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALD---REAIPSYQLQV 77 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCC---TTTCCEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCC---cccCceEEEEE
Confidence 35899999999 99999999999996 59999985 33468999999999999999999 99999999999
Q ss_pred EEEECCcCCceeEEEEEEEEee
Q psy8639 357 TASDHGIPPKSSSLVINILSET 378 (570)
Q Consensus 357 ~a~D~g~~~~s~~~~v~I~V~d 378 (570)
.|+|+|.|++++.++|.|.|.|
T Consensus 78 ~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 78 ETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECCCCceeeEEEEEEEEEC
Confidence 9999999999999999999986
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.52 E-value=5.2e-14 Score=115.48 Aligned_cols=88 Identities=15% Similarity=0.297 Sum_probs=80.7
Q ss_pred eEEEeccCCC--CeEEEEEEEEeCCCCCCeEEEEEEEeC----CCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEE
Q psy8639 284 LIYVSEQTRV--GSHVTKMTAVDQDSGDNGRVTYVISGG----NEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNIT 357 (570)
Q Consensus 284 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~ysi~~~----~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~ 357 (570)
.+.|.||.+. |+.++++.|+|+|. .++|+|.+. +..+.|.|++.+|.|++.++|| ||....|.|+|.
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~V~ 79 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLD---RETIATYQLYVE 79 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCC---TTTCSEEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccC---CcCCCEEEEEEE
Confidence 5899999998 89999999999997 489999863 2457899999999999999999 999999999999
Q ss_pred EEECCcCCceeEEEEEEEEee
Q psy8639 358 ASDHGIPPKSSSLVINILSET 378 (570)
Q Consensus 358 a~D~g~~~~s~~~~v~I~V~d 378 (570)
|+|+|.|++++.++|.|.|.|
T Consensus 80 A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 80 TTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EECTTCCEEEEEEEEEEEEEC
T ss_pred EEECCCCcccceEEEEEEEEC
Confidence 999999999999999999986
No 53
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.52 E-value=5e-14 Score=116.61 Aligned_cols=91 Identities=19% Similarity=0.327 Sum_probs=78.8
Q ss_pred EEEEeCCCC--CCeEEEEeEEecCCCCCCceEEEEEEecCC---CCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEE
Q psy8639 173 TIPVNEDTL--VGSTIWNFTATDADDGSNGELRYGLVRQYP---EGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTD 247 (570)
Q Consensus 173 ~~~v~E~~~--~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~---~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D 247 (570)
.+.|.||.+ .++.++++.|. .|.|+.++|+|..+.. +.+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~Ad---~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKSN---KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEEG---GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEECC---CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 468999998 58899999993 3568999999998642 246899999999999999999999999999999999
Q ss_pred CCCCCCCCceeEEEEEEEEeeC
Q psy8639 248 QAANISERLSTSLTARVVVKDL 269 (570)
Q Consensus 248 ~~~~~~~~~~~~~~v~I~V~dv 269 (570)
+++++ +++++.|.|+|.|+
T Consensus 87 ~g~p~---~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNA---VEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCB---SSCCEEEEEEEEC-
T ss_pred CCCCc---eeeEEEEEEEEEeC
Confidence 99865 78899999999985
No 54
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.51 E-value=8.4e-14 Score=114.07 Aligned_cols=88 Identities=16% Similarity=0.219 Sum_probs=80.6
Q ss_pred eEEEeccCCCC--eEEEEEEEEeCCCCCCeEEEEEEEeC----CCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEE
Q psy8639 284 LIYVSEQTRVG--SHVTKMTAVDQDSGDNGRVTYVISGG----NEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNIT 357 (570)
Q Consensus 284 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~ysi~~~----~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~ 357 (570)
.+.|.||.+.| +.++++.|+|+|. .++|+|.+. +..+.|.|++.+|.|++.++|| ||....|.|+|.
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LD---rE~~~~y~l~v~ 78 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLD---REAIANYELEVE 78 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCC---TTTCCEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccC---CccCCEEEEEEE
Confidence 48999999987 8999999999997 699999863 2457899999999999999999 999999999999
Q ss_pred EEECCcCCceeEEEEEEEEee
Q psy8639 358 ASDHGIPPKSSSLVINILSET 378 (570)
Q Consensus 358 a~D~g~~~~s~~~~v~I~V~d 378 (570)
|+|+|.|++++.++|.|.|.|
T Consensus 79 A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 79 VTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEETTSCEEEEEEEEEEEEEC
T ss_pred EEECCCCceeeeEEEEEEEEC
Confidence 999999999999999999986
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.28 E-value=1.1e-12 Score=108.09 Aligned_cols=93 Identities=20% Similarity=0.339 Sum_probs=75.3
Q ss_pred CeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCC--ceEEEE
Q psy8639 389 PSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSG--YNLTYM 466 (570)
Q Consensus 389 ~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~ 466 (570)
..+.+.|.|+.++|+.|++| |.|.|. ..+ ..+.|+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~------------------------------------------~~~~~~~~~y~ 39 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGL------------------------------------------ELTELVPRLFR 39 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTC------------------------------------------CHHHHTTTTBC
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCC------------------------------------------CCcccccEEEE
Confidence 35678999999999999999 999876 211 357899
Q ss_pred ecCCCCCCcEEEeCCCcEEEEcccCCccccc------eEEEEEEEEeCCCCCeeEEEEEEEEEecCCC
Q psy8639 467 IPAGVADDMFKIDAETGVVTLARSLDRETVD------QYNLVVHVTDSKSGDYDTTNVFITILDVNDN 528 (570)
Q Consensus 467 i~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~------~~~l~V~atD~~~~~~~~~~v~I~V~dvNd~ 528 (570)
|.++...++|.|++.+|.|++.++||||+.. .|.+.|.+ .. +. ....|.|.|.|+|||
T Consensus 40 i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~--~~-p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 40 VASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIV--DR-PL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp CBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEE--TT-TT-EEEEEEEEEECCSCC
T ss_pred EEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEE--CC-CC-EEEEEEEEEEEcCCC
Confidence 9877777899999999999999999999863 56666655 33 44 478899999999997
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.18 E-value=5.6e-12 Score=103.84 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=73.8
Q ss_pred CceEEEEeCCCCCCeEEEEeEEecCCCCCC--ceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcc----eEEEEE
Q psy8639 170 NPLTIPVNEDTLVGSTIWNFTATDADDGSN--GELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLT----SFILVV 243 (570)
Q Consensus 170 ~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~--~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~----~~~l~v 243 (570)
..+..+|+|+.+.|+.|+++ |.|.|.+.+ ..+.|+|.++.+ ..+|.|++.+|.|++.++||||... .+.+.+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~-~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~ 80 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDR-GDLLEVNLQNGILFVNSRIDREELCGRSAECSIHL 80 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSC-SCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCC-ccEEEEECCeEEEEECCcCccccccCCCCcEEEEE
Confidence 35778999999999999999 999875322 358899987643 6799999999999999999999863 334444
Q ss_pred EEEECCCCCCCCceeEEEEEEEEeeCCCC
Q psy8639 244 KVTDQAANISERLSTSLTARVVVKDLNDN 272 (570)
Q Consensus 244 ~a~D~~~~~~~~~~~~~~v~I~V~dvNd~ 272 (570)
.+.... | . ....|.|.|.|+|||
T Consensus 81 ~v~~~~-p----~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 81 EVIVDR-P----L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEETT-T----T-EEEEEEEEEECCSCC
T ss_pred EEEECC-C----C-EEEEEEEEEEEcCCC
Confidence 444332 2 2 378999999999996
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=94.82 E-value=1.2 Score=39.98 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=23.7
Q ss_pred ccceEEEEEEEEeCCCCCeeEEEEEEEEEe
Q psy8639 495 TVDQYNLVVHVTDSKSGDYDTTNVFITILD 524 (570)
Q Consensus 495 ~~~~~~l~V~atD~~~~~~~~~~v~I~V~d 524 (570)
..+.|.|+++|+|..+..+.+..|+|+|.+
T Consensus 151 ~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 151 VEGNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp CSEEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred CCeeEEEEEEEEECCCCEEecceEEEEECC
Confidence 568899999999998744566778887754
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.44 E-value=3.4 Score=36.97 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=64.5
Q ss_pred CCCeEEEEEEEEeCCCCCCCceeEEEEEEEEeeCCCCCCcCCCCceEEEEeCCCC----CCeEEEEeEEecCCCCCCceE
Q psy8639 127 TCPEYKLEVRALDTSTSSNPQSSAVAIKIEIVDVNDNAPRWGENPLTIPVNEDTL----VGSTIWNFTATDADDGSNGEL 202 (570)
Q Consensus 127 ~~~~~~l~v~a~D~~g~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~----~gt~v~~v~a~D~D~g~~~~~ 202 (570)
....|.|+++|+|..|. .+....+.|.|.+ ..+|.. .+.-+.+.. .+.......|+|.|. .-..+
T Consensus 59 ~~G~htlta~A~D~aGn---~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~V 127 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR---RIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDG-KISRV 127 (190)
T ss_dssp CSEEEEEEEEEEETTSC---EEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEE
T ss_pred CCccEEEEEEEEECCCC---EeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCC-cEEEE
Confidence 45699999999997762 2233346777765 336653 233333322 223445677777652 12344
Q ss_pred EEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEee
Q psy8639 203 RYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKD 268 (570)
Q Consensus 203 ~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~d 268 (570)
.|.+.. ....-+. ++........ ....|+|+++|+|..|. .+....+.|+|.+
T Consensus 128 e~~~dg-----~~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aGn----~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 128 DFLVDG-----EVIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDDA----ASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEETT-----EEEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTCC----BCCCEEEEEEEBC
T ss_pred EEEECC-----EEEeccc-CCCEEEEEec---CCeeEEEEEEEEECCCC----EEecceEEEEECC
Confidence 444421 1111111 1111111111 45689999999999986 4456677777654
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=92.85 E-value=0.58 Score=40.47 Aligned_cols=79 Identities=19% Similarity=0.280 Sum_probs=61.3
Q ss_pred ccccccccccceeecCCCCCCeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECcccEEEECCcCCCCCCCeE
Q psy8639 52 SRCKFKKYLSNNEIKEDVPIGFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSGSLVVARQLDRETCPEY 131 (570)
Q Consensus 52 ~~p~f~~~~~~~~v~E~~~~gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G~l~~~~~LD~E~~~~~ 131 (570)
-+|.|.++.|...++-....|..++.+.-.|.. .+..+.|.. .++..|.|+ .+|.|+.++++-.-. ..-
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~---g~~~~~~~s------sDp~dFkV~-~DGtVya~r~v~L~~-~~~ 100 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN---RKRKVQYES------SEPADFKVD-EDGTVYAVRSFPLTA-EQA 100 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS---SCCCEEEEC------CCSSEEEEE-TTTEEEEESCCSCSS-SCE
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCC---CCCceeEEc------CCCCCeEEe-CCCcEEEecceeecC-CCc
Confidence 468999999988888889999999999888875 457788876 334589999 689999998864322 233
Q ss_pred EEEEEEEeCC
Q psy8639 132 KLEVRALDTS 141 (570)
Q Consensus 132 ~l~v~a~D~~ 141 (570)
.|.|.|.|..
T Consensus 101 ~F~V~a~D~~ 110 (159)
T 1op4_A 101 KFLIYAQDKE 110 (159)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEcCC
Confidence 7889999943
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=92.43 E-value=5.2 Score=38.61 Aligned_cols=130 Identities=15% Similarity=0.184 Sum_probs=65.3
Q ss_pred CCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCC--CCcEEEecCCCEEEEE---------
Q psy8639 270 NDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNE--DARFHLDHDKGILSLA--------- 338 (570)
Q Consensus 270 Nd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~--~~~F~id~~tG~l~~~--------- 338 (570)
+|.++.|.... ....|.|+. |+...+|.-.. +......+.|....+.. +.-|.- .+|.|...
T Consensus 6 dd~~g~i~F~~--~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~~--~~gtl~F~~Get~kti~ 78 (298)
T 3rb5_A 6 ADDPIRMYFEP--GHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFVG--RKGLLSFPPGVDEQRFR 78 (298)
T ss_dssp -----CEEESS--SEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBCC--CEEEEEECTTCCEECCE
T ss_pred CCCceEEEEeC--CEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCccc--cceEEEECCCceEEEEE
Confidence 35566776665 578899987 45544554443 44456678888877643 122321 12333321
Q ss_pred -eecCcccccceeEEEEEEEEEECCcCCceeEEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEE
Q psy8639 339 -RVISEYDHQSKFRAVLNITASDHGIPPKSSSLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVA 410 (570)
Q Consensus 339 -~~ld~~d~e~~~~~~l~V~a~D~g~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a 410 (570)
.-++...+|....+.+.+.... +..........+|+|.| ||.+|.|........+.|+. |.....|.-
T Consensus 79 V~I~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~R 147 (298)
T 3rb5_A 79 IEVIDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMR 147 (298)
T ss_dssp ECBCCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEE
T ss_pred EEEeCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEE
Confidence 1223223455555555444321 11112222334555566 46788877666677888874 555555443
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=91.41 E-value=8 Score=37.30 Aligned_cols=145 Identities=18% Similarity=0.242 Sum_probs=73.1
Q ss_pred CCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCCC-CcEEEeCCCcEEEEc-----------
Q psy8639 161 NDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPEG-NHFSVDHLTGTLTLL----------- 228 (570)
Q Consensus 161 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~-~~F~Id~~~G~i~~~----------- 228 (570)
+|+++.|.-..-...|.|+. |+....|.-+ .+......+.|....+.... .-|. +.+|.|...
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~-g~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEEC-SCCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEE-CCCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45566665555567899985 4443333322 23334457888877764322 1221 122333322
Q ss_pred --ccCCccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCC
Q psy8639 229 --QPLDYETLTSFILVVKVTDQAANISERLSTSLTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQD 306 (570)
Q Consensus 229 --~~lD~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D 306 (570)
..--+|....| .|..++..+.. ........+|+|.| ||.+|.|.... ....|.|+. |.....|.-...
T Consensus 81 I~dD~~~E~dEtF--~v~Ls~p~~~a--~lg~~~~atvtI~d-dD~~g~~~f~~--~~~~V~E~~--g~~~~~V~Rs~~- 150 (298)
T 3rb5_A 81 VIDDDVFEEDECF--YIRLFNPSEGV--KLAVPMIATVMILD-DDHAGIFAFTD--SVFEITESV--GRFELKVMRYSG- 150 (298)
T ss_dssp BCCCSSCCCCEEE--EEEEECCCTTC--CBCSCSEEEEEEEC-CCCCCEEECSC--SEEEECTTC--CCEEEEEEEESC-
T ss_pred EeCCCCccCcEEE--EEEEeCCCCCc--EECCCceEEEEEec-ccccccccccc--ccEEeecCC--ceEEEEEEEEec-
Confidence 11123444444 44445432111 13333456677777 45589887765 568899986 556556655443
Q ss_pred CCCCeEEEEEEEeC
Q psy8639 307 SGDNGRVTYVISGG 320 (570)
Q Consensus 307 ~~~~~~i~ysi~~~ 320 (570)
......+.|+...+
T Consensus 151 ~~g~vtV~~~T~dG 164 (298)
T 3rb5_A 151 ARGTVIVPYWTEND 164 (298)
T ss_dssp CCSCEEEEEEEEEC
T ss_pred CCCCEEEEEEecCC
Confidence 22344677776665
No 62
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=90.83 E-value=1.4 Score=44.79 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=48.1
Q ss_pred EeCCCCCCeEEEEEEEeCCCC----CcEEEe-cCCCEEEEEeecCcccccceeEEEEEEEEEECCcCCceeEEEEEEEEe
Q psy8639 303 VDQDSGDNGRVTYVISGGNED----ARFHLD-HDKGILSLARVISEYDHQSKFRAVLNITASDHGIPPKSSSLVINILSE 377 (570)
Q Consensus 303 ~D~D~~~~~~i~ysi~~~~~~----~~F~id-~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~~~~s~~~~v~I~V~ 377 (570)
+|+| +..++|+....... ....|. ..+..+.+..+. ......+.|.++++|++.|+.++...|.|+|.
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~----~~~~~tl~f~LtVTD~~~p~lTs~~rViVtV~ 437 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPS----NAGGKDIHILLTLRDNGSPNLYAYRRVVINVQ 437 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCT----TCTTCEEEEEEEEEECSSSCCEEEEEEEEEEC
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCC----CCCCcEEEEEEEEEeCCCCCccEEeEEEEEeC
Confidence 4887 44588888754333 245664 444566666553 24567899999999999888999988888873
No 63
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=88.76 E-value=1.6 Score=34.85 Aligned_cols=85 Identities=19% Similarity=0.213 Sum_probs=52.9
Q ss_pred CCCCCcCCCCceEEEEeCCCCCCeEEEEeEEecCCCCCCceEEEEEEecCCCCCcEEEeCCCcEEEEcccCCccCcceEE
Q psy8639 161 NDNAPRWGENPLTIPVNEDTLVGSTIWNFTATDADDGSNGELRYGLVRQYPEGNHFSVDHLTGTLTLLQPLDYETLTSFI 240 (570)
Q Consensus 161 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~g~~~~~~y~l~~~~~~~~~F~Id~~~G~i~~~~~lD~e~~~~~~ 240 (570)
.|.+|+|.... ...|..+...... ..+.|.|...|+ | +..|......|......|.
T Consensus 7 ~~~~P~It~~~-d~tI~~Gd~fd~~-~gvtA~D~~DGD---l-------------------T~~I~V~g~Vdt~k~G~Y~ 62 (103)
T 2kpn_A 7 SDLEPKLTVPV-GATIHVGDSFVPM-AEVLAIDKEDGD---L-------------------TSKIKVDGEVDTTKAGTYV 62 (103)
T ss_dssp CCCCCEEECCS-EEEEETTCCCCHH-HHCEEECSSSCB---C-------------------GGGCEEESCCCSSSCEEEE
T ss_pred CCCCCEEEeCC-CEEEECCCCcccc-cCcEEEcCCCCC---c-------------------ceeEEEeCcccCCCceEEE
Confidence 45678876542 3455544322211 125777765332 1 1223333456777788999
Q ss_pred EEEEEEECCCCCCCCceeEEEEEEEEeeCCCCCC
Q psy8639 241 LVVKVTDQAANISERLSTSLTARVVVKDLNDNAP 274 (570)
Q Consensus 241 l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd~~P 274 (570)
++..++|..| ...+.+.+|+|.+..+..|
T Consensus 63 VtY~VtDs~G-----n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 63 LTYTVTDSKG-----HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEEEEECTTS-----CEEEEEEEEEEECSSCCCC
T ss_pred EEEEEEcCCC-----CEEEEEEEEEEeCCCcccC
Confidence 9999999988 6778888899888665443
No 64
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=88.08 E-value=4.1 Score=35.14 Aligned_cols=80 Identities=21% Similarity=0.308 Sum_probs=61.4
Q ss_pred CCCCeecCCeeEEEEeCCCCCCcEEEEEEEecCCCCCCceEEEEEEeeccCCCceEEEEEEeeCCCceeEEEEEeecCCC
Q psy8639 381 TSLPTFLSPSYHANVSEDAIPGTYIIKVVARSPSTYGNYVYTEVFLVSEDAIPGTYIIKVVARSPSTYVYHMYLISDFSG 460 (570)
Q Consensus 381 d~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (570)
.+.|-|....|...++-....|..+++|.-.|... +
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--------------------------------------------~ 66 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--------------------------------------------K 66 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--------------------------------------------C
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--------------------------------------------C
Confidence 36789998889777778888899999998888865 4
Q ss_pred ceEEEEecCCCCCC-cEEEeCCCcEEEEcccCCccccceEEEEEEEEeCCC
Q psy8639 461 YNLTYMIPAGVADD-MFKIDAETGVVTLARSLDRETVDQYNLVVHVTDSKS 510 (570)
Q Consensus 461 ~~~~y~i~~~~~~~-~F~Id~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~ 510 (570)
..+.|.. .+. .|+|++ .|.|++.+.+-- ......|.|.|.|...
T Consensus 67 ~~~~~~s----sDp~dFkV~~-DGtVya~r~v~L-~~~~~~F~V~a~D~~t 111 (159)
T 1op4_A 67 RKVQYES----SEPADFKVDE-DGTVYAVRSFPL-TAEQAKFLIYAQDKET 111 (159)
T ss_dssp CCEEEEC----CCSSEEEEET-TTEEEEESCCSC-SSSCEEEEEEEEETTT
T ss_pred CceeEEc----CCCCCeEEeC-CCcEEEecceee-cCCCcEEEEEEEcCCC
Confidence 4566764 344 899988 699999888643 3344589999999664
No 65
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.83 E-value=7.4 Score=30.77 Aligned_cols=32 Identities=19% Similarity=0.449 Sum_probs=27.6
Q ss_pred CcceEEEEEEEEECCCCCCCCceeEEEEEEEEeeCCC
Q psy8639 235 TLTSFILVVKVTDQAANISERLSTSLTARVVVKDLND 271 (570)
Q Consensus 235 ~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~dvNd 271 (570)
....|.|++.|+|..+ .+++.++.|+|.+.+.
T Consensus 67 ~~G~y~f~LTVtD~~G-----~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN-----LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC-----CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC-----CEEEeEEEEEEcCCCC
Confidence 4569999999999987 7888999999988765
No 66
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.15 E-value=2.7 Score=33.44 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=28.3
Q ss_pred ccceEEEEEEEEeCCCCCeeEEEEEEEEEecCC
Q psy8639 495 TVDQYNLVVHVTDSKSGDYDTTNVFITILDVND 527 (570)
Q Consensus 495 ~~~~~~l~V~atD~~~~~~~~~~v~I~V~dvNd 527 (570)
..+.|.|+++++|.. +.+.+.+++|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~-G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER-NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTT-CCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCC-CCEEEeEEEEEEcCCCC
Confidence 578999999999998 58899999999998765
No 67
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=80.75 E-value=3.8 Score=32.57 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=37.1
Q ss_pred EEEEcccCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEecCCCCcc
Q psy8639 484 VVTLARSLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILDVNDNAPE 531 (570)
Q Consensus 484 ~i~~~~~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~dvNd~~P~ 531 (570)
.|.+....|....+.|.++..++|+. |...+++.+|+|.+..+..|.
T Consensus 46 ~I~V~g~Vdt~k~G~Y~VtY~VtDs~-Gn~~t~trtVtV~~~~e~~~~ 92 (103)
T 2kpn_A 46 KIKVDGEVDTTKAGTYVLTYTVTDSK-GHEVTAKQTVTVKVREEVKND 92 (103)
T ss_dssp GCEEESCCCSSSCEEEEEEEEEECTT-SCEEEEEEEEEEECSSCCCCC
T ss_pred eEEEeCcccCCCceEEEEEEEEEcCC-CCEEEEEEEEEEeCCCcccCC
Confidence 34445567877899999999999998 578889999999986665443
No 68
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=78.51 E-value=48 Score=31.70 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=26.5
Q ss_pred eeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCC
Q psy8639 283 SLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNE 322 (570)
Q Consensus 283 ~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~ 322 (570)
....|.|++ |....+|.-...+......+.|....+..
T Consensus 17 ~~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA 54 (295)
T 3us9_A 17 GTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 54 (295)
T ss_dssp SEEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSS
T ss_pred CeEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcc
Confidence 468899998 56666666665455456678998887643
No 69
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=74.93 E-value=16 Score=36.94 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=50.7
Q ss_pred CCeEEEEEEE---EcCCCCCCCceEEEEEEecCCC-CCCCceEEEC-cccEEEECCcCCCCCCCeEEEEEEEEeCCCCCC
Q psy8639 71 IGFTVGNVVS---TDSTGRAGGGHVMYSLTSLSPT-DHSGAFDIDK-SSGSLVVARQLDRETCPEYKLEVRALDTSTSSN 145 (570)
Q Consensus 71 ~gt~v~~l~a---~D~D~~~~~~~~~ysi~~~~~~-~~~~~F~id~-~~G~l~~~~~LD~E~~~~~~l~v~a~D~~g~~~ 145 (570)
.|..| +|.| +|+| ++.|+|+.....+. .......|.. ....+.+..+-+ +....|+|.++|+|.+. +
T Consensus 353 aG~tV-tLdAs~SsDPD----GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~--p 424 (437)
T 2yhg_A 353 AGSTV-SLDASGSSDPD----GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGS--P 424 (437)
T ss_dssp TTCEE-EEECTTCBCTT----CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSS--S
T ss_pred CCCEE-EEEeeeeeCCC----CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCC--C
Confidence 34444 4555 3666 67899998543321 1123556643 344666655533 45679999999999764 5
Q ss_pred CceeEEEEEEEE
Q psy8639 146 PQSSAVAIKIEI 157 (570)
Q Consensus 146 ~~s~~~~v~I~V 157 (570)
.+++...|.|+|
T Consensus 425 ~lTs~~rViVtV 436 (437)
T 2yhg_A 425 NLYAYRRVVINV 436 (437)
T ss_dssp CCEEEEEEEEEE
T ss_pred CccEEeEEEEEe
Confidence 689989898887
No 70
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=72.86 E-value=22 Score=29.65 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=27.5
Q ss_pred CCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCC
Q psy8639 272 NAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNE 322 (570)
Q Consensus 272 ~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~ 322 (570)
+.+.+.... ....|.|+. |....++.-.- +......+.|....+..
T Consensus 3 ~~~~i~F~~--~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 3 DPIRMYFEP--GHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTA 48 (137)
T ss_dssp --CEEEESS--CEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSSS
T ss_pred CCEEEEEcC--CEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCCc
Confidence 345555544 578899987 45555554443 44456678888877643
No 71
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=70.37 E-value=15 Score=33.84 Aligned_cols=77 Identities=9% Similarity=0.090 Sum_probs=47.7
Q ss_pred eEEEEEeec-CCCceEEEEec--CC-CCCCcEEEeCCCcEEEEcccCCccccceEEEEEEEEeCCC----CCeeEEEEEE
Q psy8639 449 VYHMYLISD-FSGYNLTYMIP--AG-VADDMFKIDAETGVVTLARSLDRETVDQYNLVVHVTDSKS----GDYDTTNVFI 520 (570)
Q Consensus 449 ~~~~~~~~~-~~~~~~~y~i~--~~-~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~----~~~~~~~v~I 520 (570)
.++|.+..+ ...+..+|++. ++ ....|...|+.++.+.=.. + -...+.|.+.|+|++... +...+..+.|
T Consensus 18 ~F~~tIP~~~Fsgd~~~y~vt~a~g~~LPsWL~fd~~t~TfsG~P-~-~~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I 95 (246)
T 1u2c_A 18 SFRVSIPTDLIASSGEIIKVSAAGKEALPSWLHWDPHSHILEGLP-L-DTDKGVHYISVSAARLGANGSHVPQTSSVFSI 95 (246)
T ss_dssp CEEEECCHHHHCCTTEEEEEEETTSSSCCTTEEEETTTTEEEECC-C-GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred ceEEECCccccCCCccEEEEEecCCCCCCcceEEcCCCCeEEecc-C-CCCcceEEEEEEEeeccCCCCccccccceEEE
Confidence 445544432 22344556553 33 3468999999988654332 2 246789999999985521 3446778889
Q ss_pred EEE--ecCC
Q psy8639 521 TIL--DVND 527 (570)
Q Consensus 521 ~V~--dvNd 527 (570)
.|. |.||
T Consensus 96 ~V~ped~~e 104 (246)
T 1u2c_A 96 EVYPEDHNE 104 (246)
T ss_dssp EEESSCCC-
T ss_pred EEecCCCcc
Confidence 999 5555
No 72
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=70.03 E-value=37 Score=26.49 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=23.2
Q ss_pred cceEEEEEEEEeCCCCCeeEEEEEEEEEe
Q psy8639 496 VDQYNLVVHVTDSKSGDYDTTNVFITILD 524 (570)
Q Consensus 496 ~~~~~l~V~atD~~~~~~~~~~v~I~V~d 524 (570)
.+.|.|+++|+|..+....+..|+|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 58899999999999644456778888864
No 73
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=69.59 E-value=8.2 Score=29.25 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=26.4
Q ss_pred CCccccceEEEEEEEEeCCCCCeeEEEEEEEEE
Q psy8639 491 LDRETVDQYNLVVHVTDSKSGDYDTTNVFITIL 523 (570)
Q Consensus 491 lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~ 523 (570)
+-|...+.|.++++++|.. +...+.+++|+|.
T Consensus 53 hty~~~G~Y~v~LtVtd~~-G~~~t~~~~V~V~ 84 (85)
T 2y72_A 53 HAYKKAGTYNVTLKVTDDK-GATATESFTIEIK 84 (85)
T ss_dssp EECSSCEEEEEEEEEEETT-SCEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEEECC-CCEEEEEEEEEEc
Confidence 4567889999999999988 5777778888875
No 74
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=65.03 E-value=47 Score=25.86 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=38.7
Q ss_pred CeEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCceEEECccc-EEEECCcCCCCCCCeEEEEEEEEeCCCCCCCceeE
Q psy8639 72 GFTVGNVVSTDSTGRAGGGHVMYSLTSLSPTDHSGAFDIDKSSG-SLVVARQLDRETCPEYKLEVRALDTSTSSNPQSSA 150 (570)
Q Consensus 72 gt~v~~l~a~D~D~~~~~~~~~ysi~~~~~~~~~~~F~id~~~G-~l~~~~~LD~E~~~~~~l~v~a~D~~g~~~~~s~~ 150 (570)
+.......|.|.|.+ -..+.|.+ +. .....+...- .+.+.. . ...|+|+++|+|..|. ...+
T Consensus 17 ~~v~i~a~A~D~dg~--V~kVef~v------dg-~~vg~dt~apy~~~w~~----~-~G~htl~a~AtD~~G~---~~tS 79 (98)
T 3pe9_A 17 EFLKITATASDSDGK--ISRVDFLV------DG-EVIGSDREAPYEYEWKA----V-EGNHEISVIAYDDDDA---ASTP 79 (98)
T ss_dssp SEEEEEEEECCSSSC--EEEEEEEE------TT-EEEEEECSSSEEEEEEC----C-SEEEEEEEEEEETTCC---BCCC
T ss_pred CEEEEEEEEEeCCCC--EEEEEEEE------CC-EEecccccCCEEEEEEc----C-CccEEEEEEEEECCCC---EEee
Confidence 345666777777632 45777777 11 1222221111 111211 1 5799999999998762 3345
Q ss_pred EEEEEEEe
Q psy8639 151 VAIKIEIV 158 (570)
Q Consensus 151 ~~v~I~V~ 158 (570)
..++|+|.
T Consensus 80 ~~v~vtV~ 87 (98)
T 3pe9_A 80 DSVKIFVK 87 (98)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEC
Confidence 56666665
No 75
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=61.00 E-value=70 Score=26.48 Aligned_cols=48 Identities=17% Similarity=0.150 Sum_probs=15.9
Q ss_pred ccceEEEEEEEEeC-CC---CCeeEEEEEEEEEecCCCCcccccCCeeeEEecCCC
Q psy8639 495 TVDQYNLVVHVTDS-KS---GDYDTTNVFITILDVNDNAPEFKSGSCYPITIPENS 546 (570)
Q Consensus 495 ~~~~~~l~V~atD~-~~---~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~~v~E~~ 546 (570)
....-+|.|...+. .+ +....++ |+|.| ||.+|.|. -..-...|.|+.
T Consensus 82 ~E~~E~F~v~L~~p~~~a~lg~~~~at--vtI~d-dD~~g~~~-f~~~~~~V~E~~ 133 (137)
T 3ead_A 82 FEEDECFYIRLFNPSEGVKLAVPMIAT--VMILD-DDHAGIFA-FTDSVFEITESV 133 (137)
T ss_dssp CCCCEEEEEEEECCCTTCEECSCSEEE--EEEEC-CC-------------------
T ss_pred ccCcEEEEEEEECCCCCcEECCCcEEE--EEEEC-CCCCCEEE-ECCCcEEEeccc
Confidence 34556677777775 22 3333444 45555 46678875 223344566553
No 76
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=60.58 E-value=41 Score=30.95 Aligned_cols=54 Identities=19% Similarity=0.135 Sum_probs=38.4
Q ss_pred CCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEEC---CcCCceeEEEEEEEEe--eCCC
Q psy8639 323 DARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASDH---GIPPKSSSLVINILSE--TVST 381 (570)
Q Consensus 323 ~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~---g~~~~s~~~~v~I~V~--dvNd 381 (570)
.+|...|+.++.+.-... -...+.|.++|+|++. |.....++-.+.|.|. |.|+
T Consensus 46 PsWL~fd~~t~TfsG~P~-----~~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 46 PSWLHWDPHSHILEGLPL-----DTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp CTTEEEETTTTEEEECCC-----GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CcceEEcCCCCeEEeccC-----CCCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 889999999997765544 3347789999999864 3323455677888888 5554
No 77
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=59.24 E-value=17 Score=27.43 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.0
Q ss_pred CccCcceEEEEEEEEECCCCCCCCceeEEEEEEEEe
Q psy8639 232 DYETLTSFILVVKVTDQAANISERLSTSLTARVVVK 267 (570)
Q Consensus 232 D~e~~~~~~l~v~a~D~~~~~~~~~~~~~~v~I~V~ 267 (570)
-|.....|.+++.++|..+ .+.+.++.|+|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G-----~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG-----ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS-----CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC-----CEEEEEEEEEEc
Confidence 4667789999999999887 567777777775
No 78
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=55.17 E-value=38 Score=29.09 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=16.9
Q ss_pred EEEEEEEEeeCCCCCCeecCCeeEEEEeCCCCCCcEEEEEEEe
Q psy8639 369 SLVINILSETVSTSLPTFLSPSYHANVSEDAIPGTYIIKVVAR 411 (570)
Q Consensus 369 ~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~ 411 (570)
.+.+.+.|.|- |..+.|........+.|+. |+.-.+|.-.
T Consensus 9 ~~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~ 48 (160)
T 3gin_A 9 SAALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRR 48 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEE
T ss_pred cceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEc
Confidence 34566666763 4566666555667888874 5554554433
No 79
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.30 E-value=30 Score=27.70 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=29.4
Q ss_pred CCCcEEEEcccCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEe
Q psy8639 480 AETGVVTLARSLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILD 524 (570)
Q Consensus 480 ~~tG~i~~~~~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~d 524 (570)
...+.+.+.+- ..+.|.|+|+++|..+ ..+..++|+|+.
T Consensus 67 ~~~~tlkLS~L----~eG~Y~FqltVtd~~~--~ge~~vnVTV~P 105 (113)
T 2e7m_A 67 GHKQTLNLSQL----SVGLYVFKVTVSSENA--FGEGFVNVTVKP 105 (113)
T ss_dssp TSSSEEEECSC----CSEEEEECCEEEETTE--EEECCEEEEEEC
T ss_pred CCCCeeEecCc----CcEEEEEEEEEECCCC--CccceEEEEEcC
Confidence 33555655443 5799999999999883 677788899987
No 80
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=34.93 E-value=2.1e+02 Score=24.32 Aligned_cols=58 Identities=10% Similarity=0.073 Sum_probs=31.2
Q ss_pred EEEEEEEeeCCCCCCeeecCCCCeeEEEeccCCCCeEEEEEEEEeCCCCCCeEEEEEEEeCCC
Q psy8639 260 LTARVVVKDLNDNAPVFVSPTRGSLIYVSEQTRVGSHVTKMTAVDQDSGDNGRVTYVISGGNE 322 (570)
Q Consensus 260 ~~v~I~V~dvNd~~P~~~~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~ysi~~~~~ 322 (570)
+-+.+.|.|-+. .+.+.... ....|.|+. |..-.+|.-...+.+....+.|....+..
T Consensus 10 ~~~~~~i~ddd~-~g~i~F~~--~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 10 AALEVLFQGPGP-VSKIFFEQ--GTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp -----------C-EEEEEESC--SEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred ceEEEEEecCCC-ccEEEEeC--CEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 445566666433 66776665 578899987 55555665555554456678888887643
No 81
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=31.85 E-value=1.9e+02 Score=26.82 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=25.7
Q ss_pred ccceeEEEEEEEEEECCcCCceeEEEEEEEEeeC
Q psy8639 346 HQSKFRAVLNITASDHGIPPKSSSLVINILSETV 379 (570)
Q Consensus 346 ~e~~~~~~l~V~a~D~g~~~~s~~~~v~I~V~dv 379 (570)
|.....|.++++++|... .+.+.+..|+|...
T Consensus 65 Y~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 65 YKNPGTYKVKLIVTDNQG--ASSSFTATIKVTSA 96 (260)
T ss_dssp CSSCEEEEEEEEEEETTS--CEEEEEEEEEEBCS
T ss_pred eCCCEEEEEEEEEEeCCC--CeEEEEEEEEECCC
Confidence 788999999999999653 45667788888764
No 82
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=28.84 E-value=2.1e+02 Score=26.53 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=29.2
Q ss_pred cCCccccceEEEEEEEEeCCCCCeeEEEEEEEEEecC
Q psy8639 490 SLDRETVDQYNLVVHVTDSKSGDYDTTNVFITILDVN 526 (570)
Q Consensus 490 ~lD~E~~~~~~l~V~atD~~~~~~~~~~v~I~V~dvN 526 (570)
.+-|...+.|.++++++|.. +.+.+.+..|+|....
T Consensus 62 thtY~~~GtYtVtLTVtD~~-G~s~t~t~~ItV~~~~ 97 (260)
T 2c4x_A 62 TYKYKNPGTYKVKLIVTDNQ-GASSSFTATIKVTSAT 97 (260)
T ss_dssp EECCSSCEEEEEEEEEEETT-SCEEEEEEEEEEBCSS
T ss_pred EEEeCCCEEEEEEEEEEeCC-CCeEEEEEEEEECCCC
Confidence 46678899999999999998 4667778888887643
No 83
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=23.23 E-value=1.8e+02 Score=23.15 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=35.4
Q ss_pred CCCceEEECcccEEEECCcCCCCCCCeEEEEEEEEeCCCCCCCceeEEEEEEEEee
Q psy8639 104 HSGAFDIDKSSGSLVVARQLDRETCPEYKLEVRALDTSTSSNPQSSAVAIKIEIVD 159 (570)
Q Consensus 104 ~~~~F~id~~~G~l~~~~~LD~E~~~~~~l~v~a~D~~g~~~~~s~~~~v~I~V~d 159 (570)
..+.|.++..+|.|.++.. --|..+.|-|.| ++..| ......|.+.|.|
T Consensus 64 fk~r~~fd~~n~AL~I~~v-Q~eDSg~Y~LeV--t~~tG----~v~~~~fql~VfD 112 (112)
T 2ptt_B 64 FSDIYGFDYGDFALSIKSA-KLQDSGHYLLEI--TNTGG----KVCNKNFQLLILD 112 (112)
T ss_dssp GGGTEEECTTTCCEEESSC-CGGGCEEEEEEE--ECTTC----BEEEEEEEEEEC-
T ss_pred eCCEEEEecCCcEEEEEec-CcccCceEEEEE--ecCCC----cEEEEEEEEEeeC
Confidence 3578899999999998754 246678898877 55544 6677778887764
No 84
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=20.44 E-value=2e+02 Score=31.01 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=40.2
Q ss_pred EEEEeCCCCCCeEEEEEEEeCCCCCcEEEecCCCEEEEEeecCcccccceeEEEEEEEEEECCcCCceeEEEEEEEEe
Q psy8639 300 MTAVDQDSGDNGRVTYVISGGNEDARFHLDHDKGILSLARVISEYDHQSKFRAVLNITASDHGIPPKSSSLVINILSE 377 (570)
Q Consensus 300 v~a~D~D~~~~~~i~ysi~~~~~~~~F~id~~tG~l~~~~~ld~~d~e~~~~~~l~V~a~D~g~~~~s~~~~v~I~V~ 377 (570)
+.|-+--.+......|+|.+- +..|-.+......+..+ .-..+.|+|.|.|++....-....+++.|.|.
T Consensus 678 f~~l~y~~~~~~~y~Y~L~G~-d~~W~~~~~~~~~~~yt-------nL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 678 LSDLPYSLDEKNKFVYRLEGM-DKEWNFLKSNINRITYS-------NLSYGNYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp EECCCTTCSSCCCEEEEEETT-CSSCEECCTTCCEEEEC-------SCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred EEcccCCCCccCeEEEEecCC-CCCccCCCCCcceEEec-------CCCCccEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 333433334455688888764 56676554333444333 33478999999999855331223445666553
Done!