BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8640
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 139/237 (58%), Gaps = 49/237 (20%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +TGVL V LDYD+G+ + LI++ D PL S+ ++ L DENDN PK
Sbjct: 2752 IDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHH---QRPLCSLQPFRLELHDENDNEPK 2808
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP+TEY+ F+ ENEP+GSSVF A A+D+DKG +G+LNYSI A + + SWK+FRV
Sbjct: 2809 FPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD-----ESSWKMFRV 2863
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
D+ +GLVT+ VFDYE R RY D E
Sbjct: 2864 DSESGLVTSAFVFDYEQRQRY--------------------------------DME---- 2887
Query: 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFIL-SGTDLPVGYVVGHL 296
LL++D GG+ V VRVEIESRDEF PQFTERT++F+L + LP GYVVG +
Sbjct: 2888 ----LLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQV 2940
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D +G L + Q LDY++ S H LI+ DGG P L + L+ + + +QD NDN P
Sbjct: 927 AIDARSGHLILSQHLDYES-SQRHTLIVTATDGGVPSLSTNLT----ILVDVQDVNDNPP 981
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY V E+ I + + A+D+D G+ ++ Y I+ A
Sbjct: 982 VFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAG--------------- 1026
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARS 239
VD +T ++++ V + F + S W ++ R D E R
Sbjct: 1027 VDNVTNSISSSDVSQH-------FGIFPN-SGW----IYLR----------APLDRETRD 1064
Query: 240 RYAFTLLSTDSGGRTCKVKVRVEIESRD--EFHPQFTERTFKFILSGTDLPVGYVVG 294
RY T+L+TD+G K RV + D + P+F + ++F + +L G VVG
Sbjct: 1065 RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIE-ENLRRGSVVG 1120
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP TG+++ + +D +T L ++ DGG PPL SS + +T+ D NDN P
Sbjct: 503 IDPQTGLITTRSHIDCETEPVPQLTVV-ARDGGVPPL----SSTATVLVTIHDVNDNEPI 557
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + Y V ENEP+G + A+D D G +NY+I G+ + + F V
Sbjct: 558 FDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTI----GEGFKHLTE----FEV 609
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +G + D+E RS Y F +L+T
Sbjct: 610 RSASGEICIAGELDFERRSSYEFPVLAT 637
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 19/151 (12%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITL--QDENDN 117
++D +G LS + PLD + S + L ++ D G+P S H IT+ +D+NDN
Sbjct: 1843 SIDSSSGELSAR-PLDREQ-HSRYTLQIQASDRGQPK-----SRQGHCNITIFVEDQNDN 1895
Query: 118 APKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
AP+F +++Y V E+ P+G+SV A D D G +L YS+ + + W+
Sbjct: 1896 APRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLAN---------ETQWQ- 1945
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
F +D +GL+TT D E ++ Y F +L+T
Sbjct: 1946 FAIDGQSGLITTVGKLDRELQASYNFMVLAT 1976
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 49 PLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLK 108
PL++ A +D +G L V + LD + S L I ++ ++P SS +K
Sbjct: 1363 PLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTAS---NNPQSSAITVK 1419
Query: 109 ITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGY 168
I + D NDNAP++P V E P+G+ + ATD D G G L Y +I
Sbjct: 1420 IEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLN 1479
Query: 169 TDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMR 228
+ + LFR+D+LTG ++ A D+EA Y LL ++ S V R +Q +
Sbjct: 1480 ESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEY---LLIVQALDQSSNVTER-LQTSVTV 1535
Query: 229 RGVVFDYEARSRYAFTLLSTDSGGRTCKV 257
R + D A + SGG+T +
Sbjct: 1536 RLRILD--ANDHAPHFVSPNSSGGKTASL 1562
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
L+++ DGG PPL ++ + IT+QD NDN P F + Y V EN +G+SV
Sbjct: 201 LLIEALDGGTPPLRGFMT----VNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVY 256
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204
A+D D + G + Y+I + D ++FR+D TG + N D+E + +
Sbjct: 257 ASDTDADENGLVEYAINRRQS-------DKEQMFRIDPRTGAIYINKALDFETKELHELV 309
Query: 205 LLS 207
+++
Sbjct: 310 VVA 312
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 61 VDPLTGVLSVQQPLD------YDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDE 114
V P+TG +S ++PLD YD L+++ D G P S+ ++I + D
Sbjct: 1148 VHPVTGEISTREPLDRELRELYD-------LVVEARDQGTPVR----SARVPVRIHVSDV 1196
Query: 115 NDNAPKFP-ITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDD 173
NDNAP+ E + V E +P G+ V RA D D G + YSI+ S D
Sbjct: 1197 NDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDS------D 1250
Query: 174 SWKLFRVDALTGLVTTNAVFDYEARSRY 201
LF +D +G++ T V D+E RS Y
Sbjct: 1251 GHGLFSIDPTSGVIRTRVVLDHEERSIY 1278
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDG-GKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
+G + + +PLD++ S ++L ++ G+PP+ T + I ++D NDNAP+F
Sbjct: 828 SGNIRIAKPLDHEAKSQ---VLLNIQATLGEPPV----YGHTQVNIEVEDVNDNAPEFEA 880
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDAL 183
+ V E+ +G+ ++ A A D D G G++ YS++ + G LF +DA
Sbjct: 881 SMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKG---------LFAIDAR 931
Query: 184 TGLVTTNAVFDYEARSRYAFTLLST 208
+G + + DYE+ R+ + +T
Sbjct: 932 SGHLILSQHLDYESSQRHTLIVTAT 956
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 17/143 (11%)
Query: 51 SQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKIT 110
SQ+Q +++ +D LTG LS+Q PLD++ E+LLI++ D + +S+T +++
Sbjct: 1481 SQEQAMSLFRMDSLTGALSLQAPLDFE-AVQEYLLIVQALDQSSNVTERLQTSVT-VRLR 1538
Query: 111 LQDENDNAPKF--PITEYLE----FVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA 164
+ D ND+AP F P + + F+ + IG V A D D GD G+L Y I
Sbjct: 1539 ILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGN 1598
Query: 165 ASGYTDVDDSWKLFRVDALTGLV 187
G FR+++ TG++
Sbjct: 1599 GEGR---------FRINSQTGII 1612
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 98 DSP-LSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
D+P L+S L I L+DENDN+PKF +++ V E G+ V A D D G +L
Sbjct: 2245 DAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARL 2304
Query: 157 NYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
Y I+ + D+++ + A +G+V TN V D E R Y +++T
Sbjct: 2305 RYHIVDG------NHDNAFVI--EPAFSGIVRTNIVLDREIRDIYKLKIIAT 2348
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
LI+ +D G+P P S +L + +Q ++N P+F Y + EN P GS V
Sbjct: 1633 LIIGAKDHGQP---EPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVT 1689
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204
A + + L+Y I + A+ LF VD G++TT FD E+++ Y
Sbjct: 1690 AKSLHGAENANLSYEIPAGVAN---------DLFHVDWQRGIITTRGQFDRESQASYVLP 1740
Query: 205 L 205
+
Sbjct: 1741 V 1741
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 63 PLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFP 122
P +G + ++ PLD +T L +L D G P + T + + + D NDN PKF
Sbjct: 1047 PNSGWIYLRAPLDRETRDRYQLTVLAT-DNGTPAAHAK----TRVIVRVLDANDNDPKFQ 1101
Query: 123 ITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDA 182
++Y + EN GS V A+D+D G+ + YS++ +S F+V
Sbjct: 1102 KSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSS-----------FQVHP 1150
Query: 183 LTGLVTTNAVFDYEARSRY 201
+TG ++T D E R Y
Sbjct: 1151 VTGEISTREPLDRELRELY 1169
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 70 VQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEF 129
V PLD + S+ L ++ D G PPL + S L+IT D NDN P+F Y
Sbjct: 405 VHLPLDREIVSNYTLSVVAT-DKGTPPLHA--SKSIFLRIT--DVNDNPPEFEQDLYHAN 459
Query: 130 VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTT 189
V E G+SV A D D+G L YS+ + W F++D TGL+TT
Sbjct: 460 VMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETP-----ETHAQW--FQIDPQTGLITT 512
Query: 190 NAVFDYEARSRYAFTLLS 207
+ D E T+++
Sbjct: 513 RSHIDCETEPVPQLTVVA 530
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G + + LD++ SS +L + GG LS+ +K+ L D NDN P F
Sbjct: 613 SGEICIAGELDFERRSSYEFPVLATDRGG-------LSTTAMIKMQLTDVNDNRPVFYPR 665
Query: 125 EYLEFVGENEPIGSS------VFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
EY + E+ P SS + ATD D G++G+++Y I++ +G +F
Sbjct: 666 EYKVSLRES-PKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAG---------IF 715
Query: 179 RVDALTGLV 187
R+D TG +
Sbjct: 716 RIDRSTGEI 724
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 25/122 (20%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSIT-HLKITLQDENDNA 118
A+D TG + + LD +T +S L+ + PLS + +T++DENDNA
Sbjct: 71 AIDRATGEIRTKVKLDRETRASYSLVAI------------PLSGRNIRVLVTVKDENDNA 118
Query: 119 PKFPITE-YLEFVGENEP--IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
P FP T ++EF EN P + ++ AR D+D Y Y+I+S +V+D++
Sbjct: 119 PTFPQTSMHIEF-PENTPREVKRTLLPAR--DLDLEPYNTQRYNIVSG------NVNDAF 169
Query: 176 KL 177
+L
Sbjct: 170 RL 171
Score = 38.1 bits (87), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 104 ITHLKITLQDENDNAPKF-PITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+ + IT+ D NDN+P+F P + Y V EN G + T A+D+D+G L YSI
Sbjct: 1777 VATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITG 1835
Query: 163 AAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPM 222
+ F +D+ +G ++ D E SRY + ++ R SR
Sbjct: 1836 G---------NLGNKFSIDSSSGELSARP-LDREQHSRYTLQIQAS----DRGQPKSRQG 1881
Query: 223 QCLI 226
C I
Sbjct: 1882 HCNI 1885
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 107 LKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAAS 166
+++ + D NDN P FP L V E +G+ + + A D+D Y L Y + A
Sbjct: 2361 IRVQIVDVNDNQPTFPPNN-LVTVSEATELGAVITSISANDVDT--YPALTYRL---GAE 2414
Query: 167 GYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
D+++ +F +D +G + DYE + Y ++++
Sbjct: 2415 STVDIEN-MSIFALDRYSGKLVLKRRLDYELQQEYELDVIAS 2455
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 31/239 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP- 119
++P TG LS Q L ++G HL ++ D G P P SS+ +++ + + P
Sbjct: 2056 INPSTGALSASQSLASESGKLLHLEVV-ARDKGNP----PQSSLGLIELLIGEAPQGTPV 2110
Query: 120 -KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
+F Y + EN P G+ + A D G K+ +S + G +
Sbjct: 2111 LRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSFGAGNEDG---------IL 2160
Query: 179 RVDALTGLVTTNA--VFDYEARSRYAFTLLS-----TYSVWTRSLVWSRPMQCLIMRRGV 231
+D+L+G + N + DY+ S + + LS Y P +R +
Sbjct: 2161 SLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRAL 2220
Query: 232 VFDYEARS-------RYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILS 283
A + R + D+ ++ +E+E ++ P+F+++ F +S
Sbjct: 2221 TSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVS 2279
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP TG + + + LD++T L+++ + G + PL + + I + D NDN P
Sbjct: 285 IDPRTGAIYINKALDFETKELHELVVVAKDHG-----EQPLETTAFVSIRVTDVNDNQPT 339
Query: 121 FPIT----EYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAASGYTDVDDSW 175
+ + + E+ G V D D K +Y +N ++ D +
Sbjct: 340 INVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGG--------DGHF 391
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
L D LV + D E S Y ++++T
Sbjct: 392 ALTTRDNSIYLVIVHLPLDREIVSNYTLSVVAT 424
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 54 QRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQD 113
+ ++I A+D +G L +++ LDY+ L ++ D+ + T L + + D
Sbjct: 2420 ENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIAS--------DAAHEARTVLTVRVND 2471
Query: 114 ENDNAP---------KFPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISA 163
ENDNAP F I + + E+ + + T ATD D +G+ K+ Y II
Sbjct: 2472 ENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIY-IIEP 2530
Query: 164 AASGYT 169
A G++
Sbjct: 2531 AQEGFS 2536
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFT 142
H+L + DGG L S ++ L I D P F Y +V E+ P G+ V +
Sbjct: 740 HMLNISATDGGN--LRSNADAVVFLSII--DAMQRPPIFEKARYNYYVKEDIPRGTVVGS 795
Query: 143 ARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYA 202
A D + YSI S GY F ++ +G + D+EA+S+
Sbjct: 796 VIAASGDVAHRSPVRYSIYSGDPDGY---------FSIETNSGNIRIAKPLDHEAKSQVL 846
Query: 203 FTLLST 208
+ +T
Sbjct: 847 LNIQAT 852
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DP +GV+ + LD++ S + L + DGG PP ++ + L++ + D NDN P
Sbjct: 1256 SIDPTSGVIRTRVVLDHEE-RSIYRLGVAASDGGNPPRET----VRMLRVEVLDLNDNRP 1310
Query: 120 KFPITEYLEFVGENEPIGSSV 140
F + + V E+ +G V
Sbjct: 1311 TFTSSSLVFRVREDAALGHVV 1331
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 109 ITLQDENDNAPKFPIT-EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
IT+ D NDN P F + +Y + E P+ S+ +A D D+ + N ++ SG
Sbjct: 2687 ITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQEN--TPNSEVVYDITSG 2744
Query: 168 YTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR-YAFTLLSTYSVWTRSLVWSRPMQC 224
+ +F +D +TG++ N DY++ ++ Y + + S R L +P +
Sbjct: 2745 -----NDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRL 2797
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D +G+++ LD + +S + ++L DGG+ + S+ ++I + D NDN P
Sbjct: 1947 AIDGQSGLITTVGKLDRELQASYNFMVLAT-DGGRYEV---RSATVPVQINVLDINDNRP 2002
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y+ V G ++ +A D D G ++ YS ++A S + FR
Sbjct: 2003 IFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYS-LNAENSAVS------AKFR 2055
Query: 180 VDALTGLVTTNAVFDYEA 197
++ TG ++ + E+
Sbjct: 2056 INPSTGALSASQSLASES 2073
>sp|Q9Y5G3|PCDGD_HUMAN Protocadherin gamma-B1 OS=Homo sapiens GN=PCDHGB1 PE=2 SV=1
Length = 927
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 67 VLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEY 126
VL +++PLD + SS H LIL DGG PPL S TH+ I + D NDNAP F Y
Sbjct: 190 VLLLEKPLDREHQSS-HRLILTAMDGGDPPL----SGTTHIWIRVTDANDNAPVFSQEVY 244
Query: 127 LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGL 186
+ EN P G+SV ATD D+G ++ Y+ +++ S LF ++ TG
Sbjct: 245 RVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPI--------STSLFNLNPNTGD 296
Query: 187 VTTNAVFDYEARSRYAFTL 205
+TTN D+E SRY ++
Sbjct: 297 ITTNGTLDFEETSRYVLSV 315
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
+ G L+ +Q DY+ + + D GKP L SS T + + + D NDNAP F
Sbjct: 402 IAGALNREQTADYN-------VTIIATDKGKPAL----SSRTSITLHISDINDNAPVFHQ 450
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL--FRVD 181
Y+ V EN P G+S+ A+D D G G+++YSI++ +D++ L V
Sbjct: 451 ASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA------SDLEPRELLSYVSVS 504
Query: 182 ALTGLVTTNAVFDYEARSRYAFTL 205
+G+V FD+E + TL
Sbjct: 505 PQSGVVFAQRAFDHEQLRAFELTL 528
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG ++ LD++ +S ++L ++ +DGG ++ +++I + DENDNAP+
Sbjct: 290 LNPNTGDITTNGTLDFEE-TSRYVLSVEAKDGGV------HTAHCNVQIEIVDENDNAPE 342
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYG 154
+ + E+ +G+ + + D D G G
Sbjct: 343 VTFMSFSNQIPEDSDLGTVIALIKVRDKDSGQNG 376
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L ++ L+ +V P +GV+ Q+ D++ + L L+ D G P L + +S L++
Sbjct: 492 LEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFEL-TLQARDQGSPALSANVS----LRV 546
Query: 110 TLQDENDNAPK--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+ D NDNAP+ +P + + V G V A D D G L+Y ++
Sbjct: 547 LVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 606
Query: 163 AAASGYTDVDDSWKLFRVDALTGLV-TTNAVFDYEA 197
A+ G LF + TG V T A+ D +A
Sbjct: 607 ASEPG---------LFSLGLRTGEVRTARALGDRDA 633
>sp|Q5DRB0|PCDGD_PANTR Protocadherin gamma-B1 OS=Pan troglodytes GN=PCDHGB1 PE=3 SV=1
Length = 927
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 13/138 (9%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L +++PLD + SS H LIL DGG PPL S TH+ I + D NDNAP F Y
Sbjct: 191 LLLEKPLDREHQSS-HRLILTAMDGGDPPL----SGTTHIWIRVTDANDNAPVFSQEVYR 245
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P G+SV ATD D+G ++ Y+ +++ S LF ++ TG +
Sbjct: 246 VSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPI--------STSLFNLNPNTGDI 297
Query: 188 TTNAVFDYEARSRYAFTL 205
TTN D+E SRY ++
Sbjct: 298 TTNGTLDFEETSRYVLSV 315
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
+ G L+ +Q DY+ + + D GKP L SS T + + + D NDNAP F
Sbjct: 402 IAGALNREQTADYN-------VTIIATDKGKPAL----SSRTSITLHISDINDNAPVFHQ 450
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL--FRVD 181
Y+ V EN P G+S+ A+D D G G+++YSI++ +D++ L V
Sbjct: 451 ASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA------SDLEPRELLSYVSVS 504
Query: 182 ALTGLVTTNAVFDYEARSRYAFTL 205
+G+V FD+E + TL
Sbjct: 505 PQSGVVFAQRAFDHEQLRAFELTL 528
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG ++ LD++ +S ++L ++ +DGG ++ +++I + DENDNAP+
Sbjct: 290 LNPNTGDITTNGTLDFEE-TSRYVLSVEAKDGGV------HTAHCNVQIEIVDENDNAPE 342
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYG 154
+ + E+ +G+ + + D D G G
Sbjct: 343 VTFVSFSNQIPEDSDLGTVIALIKVRDKDSGQNG 376
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L ++ L+ +V P +GV+ Q+ D++ + L L+ D G P L + +S L++
Sbjct: 492 LEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFEL-TLQARDQGSPALSANVS----LRV 546
Query: 110 TLQDENDNAPK--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+ D NDNAP+ +P + + V G V A D D G L+Y ++
Sbjct: 547 LVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 606
Query: 163 AAASGYTDVDDSWKLFRVDALTGLV-TTNAVFDYEA 197
A+ G LF + TG V T A+ D +A
Sbjct: 607 ASEPG---------LFSLGLRTGEVRTARALGDRDA 633
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 14/148 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D ++G +S+ +PLDY++ S + L+++ +DGG P S+ T L + + D NDNAP
Sbjct: 633 SIDSMSGDVSLVKPLDYESVRS-YRLVIRAQDGGSPSR----SNTTQLLVNVIDANDNAP 687
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F +++ E V EN P+G ++ +A D D+G ++ YSI ++ DD++ L
Sbjct: 688 RFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--------SERDDNFPL-A 738
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLS 207
VD TG V T D E + R+AF +++
Sbjct: 739 VDPRTGWVQTIKPLDREEQGRFAFQVVA 766
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
VD TGV++ LD + + ++ +D P S T L++ + D ND++P
Sbjct: 409 VDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPP-----RSGTTTLQVNVLDCNDHSPT 463
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F ++ + E +GS+V T RATD D G ++ Y I + D +FR+
Sbjct: 464 FEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI 523
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
D+ +G+++T + D E Y LL T
Sbjct: 524 DSRSGVISTRSSLDRETSDSYH--LLVT-------------------------------- 549
Query: 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTF 278
A L S S RT V+V++ ++ +PQF+ERT+
Sbjct: 550 -AADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++P TG + PLD +T +S +LL + +DGG P L S T ++I + D NDNAP
Sbjct: 951 SINPQTGAIVTNAPLDRET-TSGYLLTVTAKDGGNPSL----SDTTDVEIGVTDVNDNAP 1005
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y + E+ +G+SV A+D D G G++ Y + +D D F
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLL--------SDRDIEDGSFV 1057
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLS 207
+D +G + TN D E+ + + T ++
Sbjct: 1058 IDPTSGTIRTNKGLDRESVAVFHLTAIA 1085
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 93/236 (39%), Gaps = 59/236 (25%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
AVDP TG + +PLD + ++ +DGG PP S+ + + IT+QD NDN P
Sbjct: 738 AVDPRTGWVQTIKPLDREEQGRFAFQVV-AKDGGVPPK----SASSSVVITVQDVNDNDP 792
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y VGE++P G+ V T ATD D+ +L+Y I + G F
Sbjct: 793 AFNPKYYEANVGEDQPPGTPVTTVTATDPDED--SRLHYEITTGNTRGR---------FA 841
Query: 180 VDALT--GLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEA 237
+ + GL+T DY+ R
Sbjct: 842 ITSQNGRGLITIAQSLDYKQEKR------------------------------------- 864
Query: 238 RSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVV 293
+ T+ +TDSGGR+ V + I + F P F + + D PVG V
Sbjct: 865 ---FLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVF-EDAPVGTTV 916
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ Q LDY L + + GG+ S + I + D N+ AP F
Sbjct: 849 GLITIAQSLDYKQEKRFLLTVAATDSGGR-------SDTATVHINITDANNFAPIFENAP 901
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+G++V ATD D G ++ YS+ + +G D F ++ TG
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP----FSINPQTG 957
Query: 186 LVTTNAVFDYEARSRYAFTL 205
+ TNA D E S Y T+
Sbjct: 958 AIVTNAPLDRETTSGYLLTV 977
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G + + LD ++ + HL + V D G PPL SS ++I L+D ND+ P
Sbjct: 1058 IDPTSGTIRTNKGLDRESVAVFHLTAIAV-DKGSPPL----SSTVEVQIRLEDVNDSPPT 1112
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
F + +V EN P+GS V A D D+G ++YSII S
Sbjct: 1113 FASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSN 1159
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L+Q Q + I +D +GV+S + LD +T S HLL+ + ++ +++
Sbjct: 512 LAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASA--QSERRTATASVQV 569
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIG---SSVFTARATDMDKGDYGKLNYSIISAAAS 166
+ D+NDN P+F Y V E++ G ++V RATD D+G+ + Y+II
Sbjct: 570 KVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGG--- 626
Query: 167 GYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
++ F +D+++G V+ DYE+ Y +
Sbjct: 627 ------NTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 116 DNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
+ +P F Y+ V E +P G++V T RA D + + YS++S S S
Sbjct: 354 NQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDS---PVVYSMVSLLDS------RSQ 404
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
LF+VD+ TG+VTT+A D E + F +++T
Sbjct: 405 SLFKVDSRTGVVTTSASLDRELMDVHYFRVVAT 437
>sp|Q9Y5F9|PCDGI_HUMAN Protocadherin gamma-B6 OS=Homo sapiens GN=PCDHGB6 PE=2 SV=1
Length = 930
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
LS+++ LD + S H LIL DGG PP S+ H++I+++D NDN P F EY
Sbjct: 194 LSLEKLLDREEQRS-HSLILTALDGGDPPR----SATAHIEISVKDTNDNPPVFSRDEYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P GS V ATD D+G ++NY S A S + +F +D TG++
Sbjct: 249 ISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQS-------TKHMFSLDEKTGMI 301
Query: 188 TTNAVFDYEARSRYAFTL 205
N FD+E RY +
Sbjct: 302 KNNQSFDFEDVERYTMEV 319
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL SS + + + D NDNAP F T Y+ V EN P G+S+
Sbjct: 417 EYNVTIVATDRGKPPL----SSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISA-----AASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A+D D G G ++YSI+++ A S Y V A +G+V FD+E
Sbjct: 473 QVSASDPDLGLNGHISYSIVASDLEPLAVSSYV---------SVSAQSGVVFAQRAFDHE 523
Query: 197 ARSRYAFTL 205
+A TL
Sbjct: 524 QLRAFALTL 532
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG++ Q D++ + + ++ +DGG LS+ + I + DENDN+P
Sbjct: 293 SLDEKTGMIKNNQSFDFED-VERYTMEVEAKDGGG------LSTQCKVIIEILDENDNSP 345
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+ IT + + EN P G V + D+D G G++ +I + D +K++
Sbjct: 346 EIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNI---------ETDIPFKIYS 396
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLST 208
+ T+ D E Y T+++T
Sbjct: 397 SSNNYYKLVTDGALDREQTPEYNVTIVAT 425
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V +GV+ Q+ D++ + L L+ D G P L + +S L++ + D NDNAP
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRA-FALTLQARDHGSPTLSANVS----LRVLVGDRNDNAP 560
Query: 120 K--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVD 172
+ +P + + + V + G V A D D G L+Y ++ A+ G
Sbjct: 561 RVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPG----- 615
Query: 173 DSWKLFRVDALTGLV-TTNAVFDYEA 197
LF + TG V T A+ D +A
Sbjct: 616 ----LFSLGLRTGEVRTARALGDRDA 637
>sp|Q5DRA6|PCDGI_PANTR Protocadherin gamma-B6 OS=Pan troglodytes GN=PCDHGB6 PE=3 SV=1
Length = 930
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
LS+++ LD + S H LIL DGG PP S+ H++I+++D NDN P F EY
Sbjct: 194 LSLEKLLDREEQRS-HSLILTALDGGDPPR----SATAHIEISVKDTNDNPPVFSRDEYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P GS V ATD D+G ++NY S A S + +F +D TG++
Sbjct: 249 ISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQS-------TKHMFSLDEKTGMI 301
Query: 188 TTNAVFDYEARSRYAFTL 205
N FD+E RY +
Sbjct: 302 KNNQSFDFEDVERYTMEV 319
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL SS + + + D NDNAP F T Y+ V EN P G+S+
Sbjct: 417 EYNVTIVATDRGKPPL----SSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISA-----AASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A+D D G G ++YSI+++ A S Y V A +G+V FD+E
Sbjct: 473 QVSASDPDLGLNGHISYSIVASDLEPLAVSSYV---------SVSAQSGVVFAQRAFDHE 523
Query: 197 ARSRYAFTL 205
+A TL
Sbjct: 524 QLRAFALTL 532
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG++ Q D++ + + ++ +DGG LS+ + I + DENDN+P
Sbjct: 293 SLDEKTGMIKNNQSFDFED-VERYTMEVEAKDGGG------LSTQCKVIIEILDENDNSP 345
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+ IT + + EN P G V + D+D G G++ +I + D +K++
Sbjct: 346 EIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNI---------ETDIPFKIYS 396
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLST 208
+ T+ D E Y T+++T
Sbjct: 397 SSNHYYKLVTDGALDREQTPEYNVTIVAT 425
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V +GV+ Q+ D++ + L L+ D G P L + +S L++ + D NDNAP
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRA-FALTLQARDHGSPTLSANVS----LRVLVGDRNDNAP 560
Query: 120 K--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVD 172
+ +P + + + V + G V A D D G L+Y ++ A+ G
Sbjct: 561 RVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPG----- 615
Query: 173 DSWKLFRVDALTGLV-TTNAVFDYEA 197
LF + TG V T A+ D +A
Sbjct: 616 ----LFSLGLRTGEVRTARALGDRDA 637
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 47/218 (21%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TGVL + +PLDY+ ++ L ++ D K S + +++ D+ND+AP+F +
Sbjct: 2264 TGVLYLIKPLDYEK-MTKFTLTVQASDAEKKHF-----SFAVVFVSVLDDNDHAPQFMFS 2317
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
+ V EN PI S++ + A D D G YG+L YSI+S + D LF +D LT
Sbjct: 2318 SFSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYD-HDLFLIDPLT 2376
Query: 185 GLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFT 244
G + + DYE ++Y CL T
Sbjct: 2377 GDIHAKQILDYENGNKY----------------------CL------------------T 2396
Query: 245 LLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFIL 282
+ + D G T + V V+IE DEF P FT+ + F L
Sbjct: 2397 VQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTL 2434
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 19/146 (13%)
Query: 65 TGVLSVQQP--LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFP 122
+G L+V++P LD++ + L++L G + + + + +QDENDN+P F
Sbjct: 1737 SGQLTVKEPKFLDFEVRNEVQLIVLAESSGHR--------AYCKVAVLIQDENDNSPCFE 1788
Query: 123 ITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDA 182
+ Y V E++ + V ATD+D G G + YSI+S + + F++DA
Sbjct: 1789 QSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSG---------NQEEAFQIDA 1839
Query: 183 LTGLVTTNAVFDYEARSRYAFTLLST 208
L+G++TT A+ DYE S Y+ + +T
Sbjct: 1840 LSGVITTKAILDYELTSSYSLIVQAT 1865
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ ++G LS + LD + S+ L+IL D G PP SS+ HL++ + D ND++P
Sbjct: 1423 INEMSGELSTTRALDREQISNFTLVIL-CSDLGDPPR----SSVIHLQVRVLDANDHSPS 1477
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP Y V E+ +G+ V A D D+G G+ Y + A+ +T +
Sbjct: 1478 FPTLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFT----------I 1527
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLS 207
D ++G + T+ D EARS++ F+ ++
Sbjct: 1528 DPMSGTLKTSNTLDREARSQHTFSAVA 1554
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G L + LD + +S L+IL D G PPL SS + I + D NDN P F
Sbjct: 2160 GYLVLLHSLDREASASHELVIL-ASDSGCPPL----SSTAVISIQVLDVNDNPPNFSSLS 2214
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+GS + A D D G + ++ Y+IIS G+ F ++ TG
Sbjct: 2215 YHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGH---------FYLEENTG 2265
Query: 186 LVTTNAVFDYEARSRYAFTL 205
++ DYE +++ T+
Sbjct: 2266 VLYLIKPLDYEKMTKFTLTV 2285
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G+L+ PLDY+ ++H+L + D G P L SS L +T+ D ND AP
Sbjct: 1214 LDESSGLLTTTCPLDYEM-KTQHILTVLALDDGTPAL----SSSQTLTVTVLDVNDEAPV 1268
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V EN+ G V A D D G KL + I+ A S++LF +
Sbjct: 1269 FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGA---------SFELFEI 1319
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLL 206
++ TG V T + D E + + +L
Sbjct: 1320 NSDTGEVVTTTILDREIQEVFTLRVL 1345
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 16/119 (13%)
Query: 89 VEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEY-LEFVGENEPIGSSVFTARATD 147
V DGG P L SS T + T++DEND+AP+F ++ Y +E + EP V+T A+D
Sbjct: 1346 VRDGGFPSL----SSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEP--EVVYTVLASD 1399
Query: 148 MDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLL 206
MD G+ + Y II G TD + F ++ ++G ++T D E S + +L
Sbjct: 1400 MDAGNNRAVEYHII----DGNTD-----ECFTINEMSGELSTTRALDREQISNFTLVIL 1449
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPL------DSPLSSITHLKITLQDE 114
+DP G + V Q +D + + + L+++ +DG + + LS+ +++ L+D
Sbjct: 111 IDPHDGQICVSQDIDRERDPATYDLLVEAKDGDEQRMTHLALVKGGLSAQAFVRVDLEDV 170
Query: 115 NDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDS 174
NDN P F + Y+ + + G+ + ATD D G YG + Y +I S
Sbjct: 171 NDNHPVFNPSTYVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGNVSS------- 223
Query: 175 WKLFRVDALTGL 186
LF +D+ TGL
Sbjct: 224 --LFTIDSTTGL 233
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
LS Q A Q +D L+GV++ + LDY+ SS + LI++ D G P L S+ T +K+
Sbjct: 1827 LSGNQEEAFQ-IDALSGVITTKAILDYELTSS-YSLIVQATDKGMPRL----SNTTVIKV 1880
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
+ D NDNAP F +E +E ++ P G V D+D LN + I + A
Sbjct: 1881 QVTDINDNAPAFLPSEAVEITEDSLP-GVIVTHVSVHDVD------LNSAFIFSFAKE-- 1931
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSV 211
+ F +D TG+V D+E + Y + + SV
Sbjct: 1932 --SNPGTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSV 1971
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI----TEYLEFVGENEPIGS 138
H + + V D G PP ++ ++ + +++ D NDN P FP E V E +P+
Sbjct: 805 HEMTVLVTDRGSPPRNATMA----VYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNM 860
Query: 139 SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR 198
V T A D D+G+ ++ YS+ S +DS F++DA G + T + Y+ R
Sbjct: 861 LVTTVFAKDPDEGNNAEVTYSVSS---------EDSSDHFKIDANNGEIRTTTILSYDYR 911
Query: 199 SRYAFTLLST 208
Y ++++T
Sbjct: 912 PSYRMSVIAT 921
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ P G + ++PLD++T + +++L V+ +P S T + IT+ D NDN P
Sbjct: 425 SIHPRLGTIRTRKPLDHET---QPVVVLTVQAQLG---SAPACSSTEVNITVMDVNDNHP 478
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
F T + + P G++++ ARA D D G G + YSI S
Sbjct: 479 AFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 521
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 84 LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTA 143
+L + D D L S+T +I + D ND+ P F I+ V E+ +GS V
Sbjct: 1129 ILTVTASDQAVNVTDRRLRSLT-AQIVILDVNDHNPTF-ISFPNAHVKEDVTVGSLVHHI 1186
Query: 144 RATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203
A D D+G GK+ YSI+S + F +D +GL+TT DYE ++++
Sbjct: 1187 TAHDPDEGRNGKVTYSILSG---------NENMTFMLDESSGLLTTTCPLDYEMKTQHIL 1237
Query: 204 TLLS 207
T+L+
Sbjct: 1238 TVLA 1241
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG L + + LDY+T +S +L + D K + LSS L I ++D+ND++P
Sbjct: 999 IDSSTGDLFLSKELDYET-TSHYLFRVITTDHSK---NLSLSSTVFLSIDVEDQNDHSPS 1054
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMD 149
F + V EN PIG+ V+ A D D
Sbjct: 1055 FQDELIVISVEENVPIGTLVYVFNAKDDD 1083
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 60 AVDPLTGVLSVQQP-LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNA 118
++DP G + P L DT S+ L+ + DGG P L ++T ++I ++D N+ A
Sbjct: 2037 SIDPKNGTIFTISPVLLLDTISTTQFLV-EASDGGNPDL----RALTLVEIGIEDMNNYA 2091
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAASGYTDVDDSWKL 177
P+F + Y + E+ +GS++ T D D + + YSIIS + V+ K
Sbjct: 2092 PEFTVKSYNLSLSEDALVGSTLVTFSNIDHDWTRENTYVEYSIISGNSQNNFHVE--TKF 2149
Query: 178 FRVD---ALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
F + G + D EA + + +L++ S
Sbjct: 2150 FHSEYPYKQVGYLVLLHSLDREASASHELVILASDS 2185
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 57 AIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSI-THLKITLQDEN 115
A+ + P TG + +++ DY++ + + + P D L ++ T + + + DEN
Sbjct: 632 AMFGIRPYTGWIYLRRQFDYESTQTYNFRVF-----AWIPEDGFLQNVSTTVIVRVWDEN 686
Query: 116 DNAPKFPITEYLEFVGENEPIGSSVF-TARATDMDKGDYGKLNYSIISAAASGYTDVDDS 174
DN+P F + + L E P+ V A DMD G G+L Y ++S
Sbjct: 687 DNSPTF-LHDVLFLKVEESPVPQGVIGKITAIDMDSGKNGQLLYFLLSDG---------- 735
Query: 175 WKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRG---- 230
K F+++ TG T V + A AF+ T ++ + + ++ L G
Sbjct: 736 -KFFKMNPNTGPAGTIYVITW-ADGAAAFS--GTDFAFSSDELQAFVLKSLFCELGEGEL 791
Query: 231 ---VVFDYEARSRYAFTLLSTDSGG--RTCKVKVRVEIESRDEFHPQFTERTFKFILSGT 285
V D E R + T+L TD G R + V V + ++ P F + L G
Sbjct: 792 INWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQ-----CLPGK 846
Query: 286 DLPVGYVVGH 295
+L V + G
Sbjct: 847 ELHVKVLEGQ 856
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 21/130 (16%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D TGV+ + + LD++ +E+ L++++ D S + L + + D NDN P
Sbjct: 1939 AIDQNTGVVVLVKTLDFEE-MTEYELLIQISD-------SVHYTEGALVVRVLDVNDNPP 1990
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y V E+ P+G SV T ATD++ + ++Y I+S++ K F
Sbjct: 1991 VFSQDFYQVTVPESIPVGYSVLTLSATDLESNE--NISYRILSSS-----------KEFS 2037
Query: 180 VDALTGLVTT 189
+D G + T
Sbjct: 2038 IDPKNGTIFT 2047
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP++G L LD + S+H D + S+ +K+ + D NDN P
Sbjct: 1527 IDPMSGTLKTSNTLDRE-ARSQHTFSAVARDCS---IQGSRSTTVIIKVYVTDVNDNDPV 1582
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
+ F+ P + RA D+D G G + +S ++ +F +
Sbjct: 1583 LEQNPFDVFLSPESPTNQTTVIVRADDLDLGPNGTVVFSFA-----------ETQSMFSI 1631
Query: 181 DALTGLV 187
D TG +
Sbjct: 1632 DKYTGEI 1638
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DPLTG + +Q LDY+ G +++ L ++ +D G D+ S + + I DE + P
Sbjct: 2372 IDPLTGDIHAKQILDYENG-NKYCLTVQAKDKG----DATASLVVWVDIEGIDEFE--PI 2424
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
F +Y + E + A+D D G G + YS+
Sbjct: 2425 FTQDQYFFTLPEKNKDRQLIGRVEASDADAGIDGVILYSL 2464
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 154 GKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
GKL++SI++ DD F +D+ TG + + DYE S Y F +++T
Sbjct: 982 GKLHFSIVA---------DDKDGHFEIDSSTGDLFLSKELDYETTSHYLFRVITT 1027
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +GV+ Q+ LD + + +L L V D G P +PLS+ +++T+ D NDNAP
Sbjct: 943 IEPTSGVIRTQRRLDRENVAVYNLWALAV-DRGSP---TPLSASVEIQVTILDINDNAPM 998
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F E FV EN P+GS V RA D D+G ++ Y I+ D F++
Sbjct: 999 FEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQIMYQIVEG---------DMRHFFQL 1049
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D L G + D+E R Y + +T
Sbjct: 1050 DLLNGDLRAMVELDFEVRREYVLVVQAT 1077
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 51/218 (23%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG +S LD +T + H+L +K D PP S+ T++ + ++D ND++P
Sbjct: 298 IDSATGAVSTDSVLDRETKET-HVLRVKAVDYSTPPR----SATTYITVLVKDTNDHSPV 352
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F +EY E V EN +G V T RA+D D L Y ++ A W +F++
Sbjct: 353 FEQSEYRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGA----------WDVFQL 402
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
+ +G+V+T AV D E + Y Q L+ EA +
Sbjct: 403 NESSGVVSTRAVLDREEAAEY---------------------QLLV---------EANDQ 432
Query: 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTF 278
+ G + V +E+E ++ +PQF+E+ +
Sbjct: 433 ------GRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+GV+S + LD + ++E+ L+++ D G+ P PLS+ + I ++DENDN P+F
Sbjct: 406 SGVVSTRAVLDREE-AAEYQLLVEANDQGRNP--GPLSATATVYIEVEDENDNYPQFSEQ 462
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
Y+ V E+ + ++V +ATD D+G ++YSI+S +G F + +L+
Sbjct: 463 NYVVQVPEDVGLNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQ---------FYLHSLS 513
Query: 185 GLVTTNAVFDYEARSRYAFTL 205
G++ D+E +Y+ ++
Sbjct: 514 GILDVINPLDFEDVQKYSLSI 534
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
L+G+L V PLD++ ++ L +K +DGG+PPL ++S + + + D NDN P F
Sbjct: 512 LSGILDVINPLDFED-VQKYSLSIKAQDGGRPPL---INSSGVVSVQVLDVNDNEPIFVS 567
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK------- 176
+ + V EN P+G V +A D D G+ +L+Y ++ A++ K
Sbjct: 568 SPFQATVLENVPLGYPVVHIQAVDADSGENARLHYRLVDTASTFLGGGSAGPKNPAPTPD 627
Query: 177 -LFRVDALTGLVTTNAVFDYEARSRYAF 203
F++ +G +T A D E Y+F
Sbjct: 628 FPFQIHNSSGWITVCAELDREEVEHYSF 655
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ PLDY +++L + DG + S H+ I + D N + P F +
Sbjct: 742 GLITLALPLDYKQ-EQQYVLAVTASDGTR-------SHTAHVLINVTDANTHRPVFQSSH 793
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+G+S+ T A D D G+ ++ Y I D FR+D +G
Sbjct: 794 YTVSVSEDRPVGTSIATLSANDEDTGENARITYVI-----------QDPVPQFRIDPDSG 842
Query: 186 LVTTNAVFDYEARSRYAFTLLS 207
+ T DYE + Y T+++
Sbjct: 843 TMYTMMELDYENQVAYTLTIMA 864
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 51/237 (21%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G + LDY+ + L I+ +D G P S T L+I + D NDNAP+
Sbjct: 837 IDPDSGTMYTMMELDYENQVAYTLTIM-AQDNGIPQK----SDTTTLEILILDANDNAPQ 891
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+ P +S+ ATD D G G+L Y+ + DD F +
Sbjct: 892 FLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLYT--------FQGGDDGDGDFYI 943
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
+ +G++ T D E ++ Y++W L + RG
Sbjct: 944 EPTSGVIRTQRRLDREN--------VAVYNLWA-----------LAVDRG---------- 974
Query: 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLR 297
+ T LS V+++V I ++ P F + + + + PVG VV +R
Sbjct: 975 -SPTPLSA-------SVEIQVTILDINDNAPMFEKDELELFVEENN-PVGSVVAKIR 1022
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
KFP+ Y + ENEP G+ + A +G+ +++Y + G D + S FR
Sbjct: 244 KFPMPNYQVALFENEPAGTLILQLHAHYTIEGEEERVSYYM-----EGLFD-ERSRGYFR 297
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLST-YSVWTRS 215
+D+ TG V+T++V D E + + + + YS RS
Sbjct: 298 IDSATGAVSTDSVLDRETKETHVLRVKAVDYSTPPRS 334
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 19/127 (14%)
Query: 91 DGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK 150
D G PP+ SS T + IT+ D NDN P F Y + E+ +GSSV T +A D D
Sbjct: 661 DHGSPPM----SSSTSVSITVLDVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA 716
Query: 151 GDYGKLNYSIISAAASGYTDVDDSWKLFRVDAL--TGLVTTNAVFDYEARSRYAFTLLST 208
S+I+ +G ++ F + + GL+T DY+ +Y + T
Sbjct: 717 N-------SVITYQLTG----GNTRNRFALSSQRGGGLITLALPLDYKQEQQYVLAV--T 763
Query: 209 YSVWTRS 215
S TRS
Sbjct: 764 ASDGTRS 770
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+VD TG + +QQ LDYD HL I V+D G PLSS+ L I L D NDN P
Sbjct: 3278 SVDERTGGIVIQQQLDYDLIQEYHLNI-TVQDLGY----HPLSSVAMLTIILTDVNDNPP 3332
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY ++ EN+P+G+ VF A A D D ++Y+ + + + F
Sbjct: 3333 VFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRH--------FFI 3384
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
++ G +++ FDYE R Y +
Sbjct: 3385 MNQSNGTISSAVSFDYEERRIYTLQI 3410
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 47 TIPLSQQQRLAIQA-------VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDS 99
T PL+ Q R ++ ++ +G +++ +PLD + SE+ L L D G PPL
Sbjct: 2415 TPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQ-QSEYTLTLVAMDTGSPPL-- 2471
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
+ +++ +QD NDN P F + Y V EN P G+ V T RATD D+G KL ++
Sbjct: 2472 --TGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFN 2529
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTR 214
++ + F +D+ TG ++T D E S Y TL++ S T
Sbjct: 2530 LLG----------EHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITE 2574
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++P G L V LD + SS +LL + D G+PP S+ + L I + DENDN+P
Sbjct: 2222 SLNPTDGQLRVVDALDRELRSS-YLLNITARDRGEPPQ----STESQLLIRILDENDNSP 2276
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F +Y V EN IG+ V ATD+D+G G++ YSI+ + D F
Sbjct: 2277 VFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIV---------LGDQNHDFS 2327
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+ TG+V +YE SRY+ T+
Sbjct: 2328 ISEDTGVVRVAKNLNYERLSRYSLTV 2353
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++P TG+L++ LDY+ ++LI++ +D G+P L + ++ + + D NDNAP
Sbjct: 1971 SLNPQTGMLTLTARLDYEE-VQHYILIVQAQDNGQPSLSTTIT----VYCNVLDLNDNAP 2025
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y V EN PI + V T A D+D G+ G + YSI + DVD F
Sbjct: 2026 IFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAG------DVDSE---FG 2076
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D+ G + T D E RS Y T+
Sbjct: 2077 IDS-NGTIRTRRNLDREHRSTYTLTV 2101
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DPLTG++ PLD + + L I DGG +P + T LK+ + DEND AP
Sbjct: 543 SMDPLTGLIVTTGPLDREIRDTVELSI-SARDGGP----NPKFAYTQLKVIILDENDEAP 597
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F E +GE+ P + V ATD D+G G + +++ + Y F
Sbjct: 598 QFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYP------LQFA 651
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLS 207
+DALTG +TT D E S+Y ++++
Sbjct: 652 LDALTGQLTTRRPLDREKMSQYEISVIA 679
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
L+++ D G PP S T + I + EN + P+F + Y V ENEP+GS++ T
Sbjct: 3197 LVVRATDRGVPPQ----SDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVG 3252
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204
ATD D G G L YSI SG + D F VD TG + DY+ Y
Sbjct: 3253 ATDDDTGPNGMLRYSI-----SGGNERQD----FSVDERTGGIVIQQQLDYDLIQEYHLN 3303
Query: 205 L 205
+
Sbjct: 3304 I 3304
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG LS+ + LD ++ HL+++ + L PLSS + I + DENDNAP+
Sbjct: 1328 LDSATGQLSLGRRLDRESQEIHHLIVVAKDAA----LKHPLSSNASITIVVLDENDNAPE 1383
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + V E P G+ + RA+D D+G +N ++ + ++G + F +
Sbjct: 1384 FTQSSSEVSVLETSPTGTELMRFRASDADQG----VNSQVVFSISAG-----NRRDTFHI 1434
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D++TG + + DYE + Y + ++
Sbjct: 1435 DSITGSLYLHKPLDYEDITSYTLNITAS 1462
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +TG L + +PLDY+ +S + L + D G P L S+ + + D+NDN P
Sbjct: 1434 IDSITGSLYLHKPLDYEDITS-YTLNITASDCGTPSL----STTVLYNVLVVDDNDNPPI 1488
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP T + + E P+ + + T A D D G GK++Y+I S + F +
Sbjct: 1489 FPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAI-----SKQEPQLPQGRHFGI 1543
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
+ TG++ T D E+ + T+++T
Sbjct: 1544 NTETGVIHTLREIDRESIDTFRLTVVAT 1571
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG +S LD + S HL ++ + + P +S +L I++ D NDN PK
Sbjct: 2540 IDSETGEISTATTLDREETSVYHLTLMAQDSS----ITEPRASSVNLTISVSDVNDNIPK 2595
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F T Y V E G VF ARA D+D G+ ++Y+I SG F +
Sbjct: 2596 FDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTI-----SGR-----DQHYFDI 2645
Query: 181 DALTGLVTTNAVFDYEARSRYAFT---LLSTYSVWTRSLVWSRPMQCLIMRRGVVFD--- 234
+ TG+V+T + +S T ++S +SL S+ +I+R +F
Sbjct: 2646 NTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSL-SSKAELTVILRPPELFPTFA 2704
Query: 235 YEARSRYAFT 244
Y A S +A +
Sbjct: 2705 YMANSHFAMS 2714
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 102 SSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSII 161
++ HL I + D ND+ P F +EY + E P GS V + ATD D G +++Y I+
Sbjct: 475 TTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDIL 534
Query: 162 SAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
S + K F +D LTGL+ T D E R ++
Sbjct: 535 SG---------NELKWFSMDPLTGLIVTTGPLDREIRDTVELSI 569
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 58/241 (24%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+ P+TGVL +Q+P+ + GS H+ ++ + G P LSS L + + D ND+ P
Sbjct: 994 IGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPP-----LSSKLSLSVLIADVNDHTPV 1048
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F T Y + E + + F ATD+D GD G+++Y II ++ ++F V
Sbjct: 1049 FDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEG---------NTERMFGV 1099
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
G + A D E R DY
Sbjct: 1100 -FPDGYLFVRAPLDREER-----------------------------------DY----- 1118
Query: 241 YAFTLLSTDSG--GRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLRL 298
YA T+ D+G R+ V V + + ++ PQFT TF F + + P VG L
Sbjct: 1119 YALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIP-ENAPADTFVGKLTA 1177
Query: 299 V 299
V
Sbjct: 1178 V 1178
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG +S LD + S+ +L+I + D G PP S+ H I L+D NDN P
Sbjct: 3596 IDVQTGEISTASRLDREETSTYNLVIGAI-DTGLPPQTG--SATVH--IELEDVNDNGPT 3650
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F ++ ENEP G+S+ T A+D D + G Y +I SW
Sbjct: 3651 FTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHK-------SW--LS 3701
Query: 180 VDALTGLVTTNAVFDYE 196
VD +G+V + FD E
Sbjct: 3702 VDRNSGVVRSTTSFDRE 3718
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TGV+ V + L+Y+ S + L ++ ED L++P L I + D NDN P F +
Sbjct: 2332 TGVVRVAKNLNYER-LSRYSLTVRAEDCA---LENPAGDTAELTINILDINDNRPTFLDS 2387
Query: 125 EYLEFVGEN--EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDA 182
YL V EN P G V T A D D LN + G +D LFR++A
Sbjct: 2388 PYLARVMENTVPPNGGYVLTVNAYDADT---PPLNSQVRYFLKEGDSD------LFRINA 2438
Query: 183 LTGLVTTNAVFDYEARSRYAFTLLS 207
+G + D E +S Y TL++
Sbjct: 2439 SSGDIALLKPLDREQQSEYTLTLVA 2463
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLL-ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+D G+LS LD + G E+ + + + GG+P +S T +++T+ D+ND+ P
Sbjct: 1767 IDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQP-----RTSRTKVRVTVLDKNDSPP 1821
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F T ++ V E+ IG ++ T RA D D G + + ++ D F
Sbjct: 1822 QFLDTPFVYNVSEDLQIGHTISTLRAHDPDT--LGSVTFLLM----------DGHDGKFL 1869
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
++ TG + N D E +S+Y +
Sbjct: 1870 LEPSTGKLILNDTLDRETKSKYELRI 1895
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG L + LD +T S++ L ++V DG + + + I + D NDN P
Sbjct: 1870 LEPSTGKLILNDTLDRET-KSKYELRIRVSDGVQ-------YTEAYATIQVSDTNDNPPL 1921
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F T Y + EN G V A D D G +L+Y ++S A+ +F +
Sbjct: 1922 FEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWAN---------DVFSL 1972
Query: 181 DALTGLVTTNAVFDYEARSRY 201
+ TG++T A DYE Y
Sbjct: 1973 NPQTGMLTLTARLDYEEVQHY 1993
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 61 VDPLTGVLSV-QQPLDYDTGSSEHLLILKVE--DGGKPPLDSPLSSITHLKITLQDENDN 117
VDP +G+LSV Q LDY+ HL + +E DG P L S+T + + + D NDN
Sbjct: 2754 VDPNSGLLSVGQDGLDYEL---THLYEIWIEAADGDTPSL----RSVTLITLNVTDANDN 2806
Query: 118 APKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
AP Y V E E + +A+D D GD G + Y + D D ++++
Sbjct: 2807 APVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRL-------QNDFDGTFEI 2859
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAFTL 205
+G + T D E YAF +
Sbjct: 2860 TE----SGEIYTRMRLDREEIGDYAFVV 2883
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G L V+ PLD + + L + D G+P SS+ + I + DENDNAP+F +
Sbjct: 1103 GYLFVRAPLDREE-RDYYALTVSCRDAGQPSR----SSVVPVVIHVIDENDNAPQFTNST 1157
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
+ + EN P + V A D D G +L++++ S F +D G
Sbjct: 1158 FTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQD-----------FTIDTRNG 1206
Query: 186 LVTTNAVFDYEA 197
+ T FD EA
Sbjct: 1207 FIKTLRPFDREA 1218
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
++ +++ D G P + S + HL D+NDN PKF L V EN IGS V
Sbjct: 2878 DYAFVVEAVDQGVPHMTGTASVLLHLL----DKNDNPPKFTRLFSLN-VTENAEIGSFVI 2932
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
++D+D G + A + Y+ ++ + FR++ +G +T D E + Y
Sbjct: 2933 RVTSSDLDLG----------ANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEY 2982
Query: 202 AFTLLSTYSVW 212
++++ W
Sbjct: 2983 ILKVVASDGAW 2993
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG++ V + LD +T + L ++ G D+ + + I++QD ND P+
Sbjct: 3489 IDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVI---ISIQDGND-PPE 3544
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F Y + E P+G+ V T +A D D + + +YSII+ + + F+
Sbjct: 3545 FIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIING---------NLKQSFK 3595
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D TG ++T + D E S Y +
Sbjct: 3596 IDVQTGEISTASRLDREETSTYNLVI 3621
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 48/170 (28%)
Query: 130 VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTT 189
V ENEPIG+S+ T A ++ Y + + A+G D +LF +DA G+++T
Sbjct: 1723 VYENEPIGTSILTVTAHLAS----AEIEYFVTNVTATGSRGQVD--RLFDIDAKLGILST 1776
Query: 190 NAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTD 249
A D EA +YE YA L
Sbjct: 1777 AAELDREAGPE---------------------------------EYEVEV-YAIAL---- 1798
Query: 250 SGG--RTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLR 297
GG RT + KVRV + +++ PQF + F + +S DL +G+ + LR
Sbjct: 1799 -GGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVS-EDLQIGHTISTLR 1846
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
L + DGG PP L + +T+ D NDN P F ++Y + E G+ V T
Sbjct: 238 LNISARDGGSPPRFGYL----QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVM 293
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTT 189
A+D D GD K+ Y + ++ F V+ TG+++T
Sbjct: 294 ASDNDLGDNSKITYYLA-----------ETEHQFTVNPETGVIST 327
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
G +S DY E I ++ K P DS + S +L + + N+ P+F
Sbjct: 3389 NGTISSAVSFDY-----EERRIYTLQIKAKNP-DSSMESYANLYVHVLGVNEFYPQFLQP 3442
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
+ V E +G+ V +ATD D G+ G++ Y ++ ++ + K FR+D T
Sbjct: 3443 VFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSS---------NDKGFRIDTNT 3493
Query: 185 GLVTTNAVFDYEARSRYAFTLLS 207
GL+ D E ++R T+++
Sbjct: 3494 GLIYVARHLDRETQNRVVLTVMA 3516
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 84 LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTA 143
LL V D G P L + +K+ + D NDNAP+F Y + E G+ +
Sbjct: 1245 LLEATVSDNGIPRLQDKVK----VKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHV 1300
Query: 144 RATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203
D D+G G + YS+ +G F +D+ TG ++ D E++ +
Sbjct: 1301 FTQDADEGLNGDVYYSLAKGNEAGQ---------FNLDSATGQLSLGRRLDRESQEIHHL 1351
Query: 204 TLLSTYSVWTRSLVWSRPMQCLIM 227
+++ + L + + +++
Sbjct: 1352 IVVAKDAALKHPLSSNASITIVVL 1375
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 36 STSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTG----SSEHLLILKV-- 89
+T R + I S QQ + ++DP TG + ++ + + S E++ L V
Sbjct: 3037 ATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLA 3096
Query: 90 EDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMD 149
D GKPPL S + I + D ++N PKF EYL + ++ G + A D
Sbjct: 3097 TDNGKPPL----YSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQ 3152
Query: 150 KGDYGKLNYSIIS 162
+++YS+++
Sbjct: 3153 DLGTNEMDYSLMT 3165
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 29/141 (20%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D LTG L+ ++PLD + S + ++ D G P +P S+ + + + D NDN P
Sbjct: 651 ALDALTGQLTTRRPLDREKMSQYEISVI-ARDQGAP---TPQSATATVWLNVADVNDNDP 706
Query: 120 KFPITEYLEFVG------------ENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
+F Y+ + E E I + A+D D GD + Y + S
Sbjct: 707 QFYPRHYIYSLADDDDDIKLKKEVEKERI---LLHVTASDKDDGDNALIEYRLESGGEG- 762
Query: 168 YTDVDDSWKLFRVDALTGLVT 188
LF++DA +G ++
Sbjct: 763 ---------LFQLDARSGAIS 774
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 61 VDPLTGVLSVQ------QPLDYDTGSSEHLLILKV--EDGGKPPLDSPLSSITHLKITLQ 112
V+P TGV+S Q + + +S+ + V D G P D T++ + L
Sbjct: 318 VNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDG----RTYVTVNLL 373
Query: 113 DENDNAPK-----FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
D ND+ P FP + V EN G+ V D D G G+ + I+S G
Sbjct: 374 DTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELG 433
Query: 168 YTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLS 207
+ ++++ L +V N V D E +Y T+++
Sbjct: 434 HFRLEEAADLH-------IVRVNGVLDREEIGKYNLTVVA 466
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP+TG + LD + G +H ++ + P++ ++I + D NDN+P+
Sbjct: 105 LDPVTGEVKTNVVLDRE-GMRDHYDLVVLSSQPTYPIE--------VRIKVLDVNDNSPE 155
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLN-YSIISAAASGYTDVDDSWKLFR 179
FP E+ G+ + ATD D G+ G + Y I++ +VD+ ++L
Sbjct: 156 FPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAG------NVDNKFRLVT 209
Query: 180 VDALTGLVT-----TNAVFDYEARSRYAFTL 205
+G + T D E+R Y +
Sbjct: 210 TANPSGDTSYLHLETTGNLDRESRGSYQLNI 240
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G ++V LD + E++L + DG + T + IT+QD+NDNAP+
Sbjct: 2961 IEPQSGNITVAGHLDREQ-QDEYILKVVASDGA-------WRAETPITITIQDQNDNAPE 3012
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDK-GDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F + Y E + + V ATD DK G ++YS+ + +F
Sbjct: 3013 FEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPS-----------PMFS 3061
Query: 180 VDALTGLVTTNAVFDYE-------ARSRYAFTLLST 208
+D TG V + ++ + YA T+L+T
Sbjct: 3062 IDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLAT 3097
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 107 LKITLQDENDNAPKFPITEYLE---FVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ I + D NDNAP F + E + EN +G ++ +R D D G +++YS+
Sbjct: 928 VNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL--- 984
Query: 164 AASGYTDVDDSWKLFRVDALTGLV 187
++ + FR+ +TG++
Sbjct: 985 -------TNNPNQQFRIGPVTGVL 1001
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ TGV+ + +D ++ + L ++ + P + LS+ + + ++D NDNAP
Sbjct: 1542 GINTETGVIHTLREIDRESIDTFRLTVVATDRAQ--PSERQLSTEKLVTVIVEDINDNAP 1599
Query: 120 KFPITEYLEFVGENEPI---------GSS--VFTARATDMDKGDYGKLNYSIISAAASGY 168
F V N I GSS V A D D G + Y I+S
Sbjct: 1600 VF--------VSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGP---- 1647
Query: 169 TDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
+LF++ TG++T ++ RY TL ST
Sbjct: 1648 ------QELFKLQRNTGIITFTPGPQFKQEVRYQLTLKST 1681
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 101 LSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
LSS + I ++D ND P F I+ + EN I + V +A D D+G G ++Y +
Sbjct: 2147 LSSTVKVTILIKDVNDEVPVF-ISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLM 2205
Query: 161 ISAAASGYTDVDDSWKL-FRVDALTGLVTTNAVFDYEARSRYAFTL 205
A D+ S L F ++ G + D E RS Y +
Sbjct: 2206 KEARDE---DMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNI 2248
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
L+G L V PLD++ E+ L +K +DGG+PPL ++S + + + D NDNAP F
Sbjct: 527 LSGSLDVINPLDFE-AIREYTLRIKAQDGGRPPL---INSSGLVSVQVLDVNDNAPIFVS 582
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAAS--GYTDVDDSWKL---- 177
+ + V EN P+G SV +A D D G+ +L Y ++ A++ G + VD
Sbjct: 583 SPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPASAPD 642
Query: 178 --FRVDALTGLVTTNAVFDYEARSRYAF 203
F++ +G +T A D E Y+F
Sbjct: 643 FPFQIHNSSGWITVCAELDREEVEHYSF 670
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG ++ + LD +T + H+L + D G P S+ T+L +T+ D ND++P
Sbjct: 313 IDAATGAVTTARSLDRETKDT-HVLKVSAVDHGSPRR----SAATYLTVTVSDTNDHSPV 367
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F +EY E + EN +G V T RATD D + Y ++ A +F +
Sbjct: 368 FEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGG----------VFEI 417
Query: 181 DALTGLVTTNAVFDYEARSRY 201
DA +G+V T AV D E + Y
Sbjct: 418 DARSGVVRTRAVVDREEAAEY 438
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +GV+ Q+ LD + + +L L V D G P +PLS+ +++++ D NDN P
Sbjct: 958 IEPTSGVIRTQRRLDRENVAVYNLWALAV-DRGSP---NPLSASVGIQVSVLDINDNPPV 1013
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F E FV EN P+GS V RA D D+G ++ Y I+ ++F++
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVP---------EVFQL 1064
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D L+G + D+E R Y + +T
Sbjct: 1065 DLLSGDLRALVELDFEVRRDYMLVVQAT 1092
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 24 RENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRL-------AIQAVDPLTGVLSVQQPLDY 76
REN++V G R T G P + R + +D +GV+ + +D
Sbjct: 378 RENLEV-----GYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDR 432
Query: 77 DTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPI 136
+ ++E+ L+++ D G+ P PLS+ + I ++DENDN P+F Y+ V E+ +
Sbjct: 433 EE-AAEYQLLVEANDQGRNP--GPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 137 GSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
++V +ATD D+G ++YSI+S G F + +L+G + D+E
Sbjct: 490 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQ---------FYLHSLSGSLDVINPLDFE 540
Query: 197 ARSRYAFTL 205
A Y +
Sbjct: 541 AIREYTLRI 549
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ PLDY +++L + DG + S + I + D N + P F +
Sbjct: 757 GLITLALPLDYKQ-ERQYVLAVTASDGTR-------SHTAQVFINVTDANTHRPVFQSSH 808
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+G+S+ T ATD D G+ ++ Y + +D FR+D TG
Sbjct: 809 YTVSVSEDRPVGTSIATISATDEDTGENARITYVL-----------EDPVPQFRIDPDTG 857
Query: 186 LVTTNAVFDYEARSRYAFTL 205
+ T DYE ++ Y +
Sbjct: 858 TIYTMTELDYEDQAAYTLAI 877
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 118 APKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNY---SIISAAASGYTDVDDS 174
+P+FP+ Y V ENEP G++V RA D D+GD G+L+Y ++ ++GY
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGY------ 310
Query: 175 WKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
F +DA TG VTT D E + + +
Sbjct: 311 ---FLIDAATGAVTTARSLDRETKDTHVLKV 338
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP TG + LDY+ ++ + L + +D G P S T L+I + D NDNAP+
Sbjct: 852 IDPDTGTIYTMTELDYEDQAA-YTLAITAQDNGIPQK----SDTTSLEILILDANDNAPR 906
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ P +SV ATD D G G+L Y+ + DD F +
Sbjct: 907 FLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYT--------FQGGDDGDGDFYI 958
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRP 221
+ +G++ T D E ++ Y++W ++ P
Sbjct: 959 EPTSGVIRTQRRLDREN--------VAVYNLWALAVDRGSP 991
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 91 DGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK 150
D G P + SS + IT+ D NDN P F Y + E+ +GSSV T RA D D
Sbjct: 676 DHGSPAM----SSSASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVLTLRARDRDA 731
Query: 151 GDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT--GLVTTNAVFDYEARSRYAFTLLST 208
S+I+ +G ++ F + + + GL+T DY+ +Y + T
Sbjct: 732 N-------SVITYQLTG----GNTRNRFALSSQSGGGLITLALPLDYKQERQYVLAV--T 778
Query: 209 YSVWTRS 215
S TRS
Sbjct: 779 ASDGTRS 785
>sp|Q9Y5E9|PCDBE_HUMAN Protocadherin beta-14 OS=Homo sapiens GN=PCDHB14 PE=2 SV=1
Length = 798
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + + LDY+ +E L L DGG PP S T + I + D NDNAP+FP + Y
Sbjct: 194 LVLDRALDYEQ-EAELRLTLTAVDGGSPPK----SGTTLVLIKVLDINDNAPEFPQSLYE 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V E+ P+GS + T A D+D G+YGK++Y+ A+ +D K F ++ ++G V
Sbjct: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHAS-------EDIRKTFEINPISGEV 301
Query: 188 TTNAVFDYEARSRYAFTLLST 208
+ D+E Y + +T
Sbjct: 302 NLRSPLDFEVIQSYTINIQAT 322
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L ++ LD ++ +E+ + + V D G P L + ++ + L D NDNAP F T Y
Sbjct: 403 LVSEKALDRES-QAEYNITITVTDLGTPRLKTEY----NITVLLSDVNDNAPTFTQTSYT 457
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA------ASGYTDVDDSWKLFRVD 181
FV EN + + ATD D G ++NYS++ AS + D+ LF +
Sbjct: 458 LFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALR 517
Query: 182 ALTGLVTTNAVFDYEARSRYAFTLLST 208
+L DYEA + F + +T
Sbjct: 518 SL----------DYEALQEFEFRVGAT 534
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P++G ++++ PLD++ S + I + GG LS L + + D NDN P+
Sbjct: 294 INPISGEVNLRSPLDFEVIQSYTINIQATDGGG-------LSGKCTLLVKVMDINDNPPE 346
Query: 121 FPITEYLEFVGENEPIGSSVFTARAT--DMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
I+ + + EN S A + D D GD G++ SI D+ F
Sbjct: 347 VTISSITKRIPEN---ASETLVALFSILDQDSGDNGRMICSI-----------QDNLPFF 392
Query: 179 RVDALTGLVT--TNAVFDYEARSRYAFTLLST 208
T + D E+++ Y T+ T
Sbjct: 393 LKPTFKNFFTLVSEKALDRESQAEYNITITVT 424
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
L++PL ++ ++D ND++P F E L + E +G++ A D+D G
Sbjct: 110 LENPLQ-FFRFELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQ 168
Query: 157 NYSIISAAASGYTDVDDS 174
NY+ IS + Y + DS
Sbjct: 169 NYT-ISPNSHFYIKIPDS 185
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP++G LS LD + + LL+L D G PP SS+ + ++L D NDN+P
Sbjct: 634 LDPVSGRLSTISSLDREEQAFYSLLVLAT-DLGSPPQ----SSMARINVSLLDINDNSPV 688
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F +Y + ENEP GS + T ATD D G G + YSI + S F+V
Sbjct: 689 FYPVQYFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRS----------RFQV 738
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
+A +G+++T D E ++ Y +++T
Sbjct: 739 NAQSGVISTRMALDREEKTAYQLQIVAT 766
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ P TG + + + LD++T S + L + +D G+PP S +S + H++ D NDN P
Sbjct: 1364 SISPNTGSIFLAKKLDFET-QSLYKLNITAKDQGRPPRSSTMSVVIHVR----DFNDNPP 1418
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
FP + + + EN PIG+SV + A D D G+L+Y+II G F
Sbjct: 1419 SFPPGDIFKSIVENIPIGTSVISVTAHDPDADINGQLSYTIIQQMPRG--------NHFT 1470
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D + G + TNA D E + + T+
Sbjct: 1471 IDEVKGTIYTNAEIDREFANLFELTV 1496
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 58/249 (23%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
+S I A++ TG+L++ + LDY+ +H + + DGG ++ + +
Sbjct: 3128 ISSGNEEGIFAINSSTGILTLAKALDYEL-CQKHEMTISAIDGGW------VARTGYCSV 3180
Query: 110 TLQ--DENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
T+ D NDN+P F +Y V EN P G++V ATD D G + Y++ S+ +
Sbjct: 3181 TVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDS-- 3238
Query: 168 YTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIM 227
LF +D TG++TT D+E + Y T+ +
Sbjct: 3239 --------DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA-------------------- 3270
Query: 228 RRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDL 287
F+ R +F V ++++ +E+ P+F + + F +S
Sbjct: 3271 -----FNVPDEERCSF-------------ATVNIQLKGTNEYVPRFVSKLYYFEISEA-A 3311
Query: 288 PVGYVVGHL 296
P G +VG +
Sbjct: 3312 PKGTIVGEV 3320
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D LTG +S+ QPLD++ ++++ ++ DGG PP SS L IT+ D NDNAP
Sbjct: 2614 IDQLTGQVSISQPLDFEK-IQKYVVWIEARDGGFPPF----SSYEKLDITVLDVNDNAPI 2668
Query: 121 FPITEYLEFVGEN-EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F ++ + EN P + T A D D G G+L+Y I++ ++++S F
Sbjct: 2669 FKEDPFISEILENLSP--RKILTVSAMDKDSGPNGQLDYEIVNG------NMENS---FS 2717
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLST 208
++ TG + + D E S Y T+ S+
Sbjct: 2718 INHATGEIRSVRPLDREKVSHYVLTIKSS 2746
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
++ L+++VED G+P L + +T+QD NDN P F + Y V E+ +GSSV
Sbjct: 215 QYQLLVEVEDKGEPKRRGYL----QVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVL 270
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A D D+G + Y + D F++D TGL+T D+EAR +Y
Sbjct: 271 QVAAADADEGTNADIRYRL-----------QDEGTPFQMDPETGLITVREPLDFEARRQY 319
Query: 202 AFTL 205
+ T+
Sbjct: 320 SLTV 323
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D +G +++ LDY+ + L+I V+ G P L+S L I + DENDN P
Sbjct: 1259 AIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGTIP-----LNSTCTLNIDILDENDNTP 1313
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
FP + V EN IG V + ATD D GD L YSI G F
Sbjct: 1314 SFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHG---------TFS 1364
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+ TG + D+E +S Y +
Sbjct: 1365 ISPNTGSIFLAKKLDFETQSLYKLNI 1390
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI--TLQDENDNA 118
++P+TGV ++ + LDY+ ++L ++ EDGG T +++ + D NDN
Sbjct: 1891 LNPITGVFNLTRLLDYEV-QQYYILTVRAEDGG--------GQFTTIRVYFNILDVNDNP 1941
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P F + Y + EN P+GS+V TD D G +L YSI ASG DS F
Sbjct: 1942 PIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSI----ASG-----DSLGQF 1992
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTL 205
VD G++ D E++S Y +
Sbjct: 1993 TVDK-NGVLKVLKALDRESQSFYNLVV 2018
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
GVL V + LD ++ S + L+++V D + P S +S + I L D NDN P F ++
Sbjct: 1997 NGVLKVLKALDRES-QSFYNLVVQVHDLPQIPA-SRFTSTAQVSIILLDVNDNPPTF-LS 2053
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
L ++ EN PI + VF A+ATD D G + Y++++ + F + +
Sbjct: 2054 PKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK----------FSIGTID 2103
Query: 185 GLVTTNAVFDYEARSRYAFTLLST 208
G V D E S Y T+++T
Sbjct: 2104 GEVRLTGELDREEVSNYTLTVVAT 2127
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
+S L +D TG +SV L D + + + +D G PPL SS + I
Sbjct: 3023 ISNDNHLGKFKLDNDTGWISVASSLISDL-NQNFFITVTAKDKGNPPL----SSQATVHI 3077
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
T+ +EN + P+F + + E+ IGS V T A D D G + YSI S G
Sbjct: 3078 TVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEG-- 3135
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVW 212
+F +++ TG++T DYE ++ T+ + W
Sbjct: 3136 -------IFAINSSTGILTLAKALDYELCQKHEMTISAIDGGW 3171
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLL-ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
TG++ LD + G+ +L+ + +E P + ++ITLQD NDN P FP
Sbjct: 1687 TGIIQTAAILDREQGACLYLVDVYAIEKSTA----FPRTQRAEVEITLQDINDNPPVFP- 1741
Query: 124 TEYLEF-VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDA 182
T+ L+ V EN GS + A D D+G + Y+IIS A DDS FR+D
Sbjct: 1742 TDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA-------DDS---FRIDP 1791
Query: 183 LTGLVTTNAVFDYEARSRYAF 203
+G + D E RS+Y+
Sbjct: 1792 ESGDLIATRRLDRERRSKYSL 1812
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
S + L + D G+P L SS T + + + D NDN P F Y + EN G+ +
Sbjct: 2118 SNYTLTVVATDKGQPSL----SSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDI 2173
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR 200
A D D+G G++ Y I++ ++ + FR+D++TG +T D E
Sbjct: 2174 IQVFAADGDEGTNGQVRYGIVNG---------NTNQEFRIDSVTGAITVAKPLDREKTPT 2224
Query: 201 YAFTLLST 208
Y T+ +T
Sbjct: 2225 YHLTVQAT 2232
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 52 QQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITL 111
+Q + A++ G +S+ PLD GS + + + D G P L SS L + +
Sbjct: 933 KQNPKNLFAINEKNGTISLLGPLDVHAGS--YQIEILASDMGVPQL----SSSVILTVYV 986
Query: 112 QDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDV 171
D NDN+P F Y + E+EP+ S F +A+D D G G++ Y+I A G T
Sbjct: 987 HDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTI----AEGNT-- 1040
Query: 172 DDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
D++ +F G + + D E + RY ++++
Sbjct: 1041 GDAFGIFP----DGQLYIKSELDRELQDRYVLMVVAS 1073
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
PL + + ++D NDNAPKF Y + E+ + V A+D+D+G+ G ++YS
Sbjct: 1189 PLKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYS 1248
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
II + + F +D+ +G VT DYEA Y+ +
Sbjct: 1249 IIKG---------NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVI 1285
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITE-YLEFVGENEPIGSSVFTARATDMDKGDYGKLNY 158
P S L +TL D ND P F E Y V EN P G+ + RATD D GD G + +
Sbjct: 561 PKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRF 620
Query: 159 SIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
S+ A + + FR+D ++G ++T + D E ++ Y+ +L+T
Sbjct: 621 SLQEA--------ETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLAT 662
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG + LD +T + L++ D G P PLSS T + +T+ D NDN P+
Sbjct: 2410 INPSTGQIITSALLDRET-KDNYTLVVVCSDAGSP---EPLSSSTSVLVTVTDVNDNPPR 2465
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
F Y+ + GS VF TD D G +L+YS+
Sbjct: 2466 FQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G L + LD + S++ L+++ +DG + SS + IT+ D ND+ PK
Sbjct: 1789 IDPESGDLIATRRLDRER-RSKYSLLVRADDGLQ-------SSDMRINITVSDVNDHTPK 1840
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+ GS V ATD D G G++ Y + + DD +F +
Sbjct: 1841 FSRPVYSFDIPEDTIPGSLVAAILATDDDSGVNGEITYIV---------NEDDEDGIFFL 1891
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
+ +TG+ + DYE + Y T+
Sbjct: 1892 NPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
V+ +GV+S + LD + ++ L I+ DGG L SP +I + IT+ D DN P
Sbjct: 738 VNAQSGVISTRMALDREEKTAYQLQIVAT-DGGN--LQSPNQAI--VTITVLDTQDNPPV 792
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V EN +G V + A+ MD LN +I +G D +F +
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSASTMD------LNSNISYLITTG-----DQKGMFAI 841
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +TG +TT V D E +S Y ++++
Sbjct: 842 NQVTGQLTTANVIDREEQSFYQLKVVAS 869
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G L V Q LD +T +L++ D G P L + + + + D NDN P F
Sbjct: 2313 SGELGVTQSLDRET-KERFVLMITATDSGSPAL----TGTGTINVIVDDVNDNVPTFASK 2367
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
Y + E+ P G+ V A+D D A+ + + F ++ T
Sbjct: 2368 AYFTTIPEDAPTGTDVLLVNASDAD-------------ASKNAVIRIIGGNSQFTINPST 2414
Query: 185 GLVTTNAVFDYEARSRYAFTLL 206
G + T+A+ D E + Y ++
Sbjct: 2415 GQIITSALLDRETKDNYTLVVV 2436
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLI--LKVEDGGKPPLDSPLSSITHLKITLQDENDNA 118
+DP TGV++ Q LD++T S HL + V D + S + I L+ N+
Sbjct: 3243 IDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEER-------CSFATVNIQLKGTNEYV 3295
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+F Y + E P G+ V A+D D G G+++Y I + K F
Sbjct: 3296 PRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIFG---------NSRKKGF 3346
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLS 207
+++ TG + + + D E R + +L+
Sbjct: 3347 QINKKTGQIYVSGILDREKEERVSLKVLA 3375
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++ TG + +PLD + S ++L +K D G P S+ + I + DENDNAP
Sbjct: 2717 SINHATGEIRSVRPLDREK-VSHYVLTIKSSDKGSPSQ----STSVKVMINILDENDNAP 2771
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F + V EN P+G +V +D D G YSI+ A+ F
Sbjct: 2772 RFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDASLP-----------FT 2819
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRS 215
++ TG + + + E RY + + S WT S
Sbjct: 2820 INPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTVS 2855
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 51 SQQQRLAIQAVD-PLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDS--PLSSITHL 107
++Q+ +Q+ P ++ V LD + S +L + ++ G PP + SS+ L
Sbjct: 402 NEQRHFEVQSSKVPNLSLIKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASL 461
Query: 108 KITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
I + D ND+ P F Y + E P GS V ATD D G L YSI+S G
Sbjct: 462 VIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLG 521
Query: 168 YTDVDDSWKLFRVDALTGLVTTNA 191
+ F + +GLVTT +
Sbjct: 522 W---------FHISEHSGLVTTGS 536
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
PLS+ ++ + L+D NDN P F T Y + E + GS V A D D G G++ YS
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1138
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR------YAFTLLST 208
F + A++G +T FD E+ R ++FT+++T
Sbjct: 1139 FEMVQPD-----------FELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIAT 1182
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG + + +PL+ + + + + + D G + T + I + D NDNAP+
Sbjct: 2820 INPSTGDIVISRPLNRED-TDRYRIRVSAHDSG-------WTVSTDVTIFVTDINDNAPR 2871
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F T Y E IGS V ATD D+G G++ Y I S + + FR+
Sbjct: 2872 FSRTSYYLDCPELTEIGSKVTQVFATDPDEGSNGQVFYFIKSQS-----------EYFRI 2920
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRP 221
+A TG + + Y+ + ++ ++ +S S +P
Sbjct: 2921 NATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSSDRGKP 2961
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +TG ++V +PLD + + HL + + G P D+ + + I L D ND P
Sbjct: 2204 IDSVTGAITVAKPLDREKTPTYHLTVQATDRGSTPRTDT-----STVSIVLLDINDFVPV 2258
Query: 121 FPITEYLEFVGENEPIGS---SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F ++ Y V EN +G+ ++ A D D+G KL+Y + + D+++ L
Sbjct: 2259 FELSPYSVNVPEN--LGTLPRTILQVVARDDDRGSNSKLSYVLFGG------NEDNAFTL 2310
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
+ +G + D E + R+ + +T S
Sbjct: 2311 ----SASGELGVTQSLDRETKERFVLMITATDS 2339
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 51 SQQQRLAIQAVDPLTGVLSVQQPLDYD--TGSSE-----HLLILKVEDGGKPPLDSPLSS 103
SQ + I A TG + +Q L Y TG S H I+ D GKP L S
Sbjct: 2913 SQSEYFRINAT---TGEIFNKQILKYQNVTGFSNVNINRHSFIVTSSDRGKPSLISE--- 2966
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
T + I + D NDNAP+F ++Y V +N +G+ + R T +D D+G +++
Sbjct: 2967 -TTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLI--RVTAIDDKDFG------LNS 3017
Query: 164 AASGYTDVDDSWKLFRVDALTGLVT 188
+ D+ F++D TG ++
Sbjct: 3018 EVEYFISNDNHLGKFKLDNDTGWIS 3042
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A++ +TG L+ +D + S L + V GG ++ T + IT++D NDN+P
Sbjct: 840 AINQVTGQLTTANVIDREEQSFYQLKV--VASGGT------VTGDTMVNITVKDLNDNSP 891
Query: 120 KFPITEYLEFVG--ENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F + +E V EN G S+F A+A D D+G G + YS+ + L
Sbjct: 892 HF--LQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQ----------NPKNL 939
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
F ++ G ++ D A S Y +L++
Sbjct: 940 FAINEKNGTISLLGPLDVHAGS-YQIEILAS 969
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP- 119
+DP TG+++V++PLD++ ++ L ++ D G P L ++ I L D NDN P
Sbjct: 298 MDPETGLITVREPLDFE-ARRQYSLTVQAMDRGVPSLTGRAEAL----IQLLDVNDNDPV 352
Query: 120 ----KFPITEYLEFVGENEPIGSSVFTARATDMDK-GDYGKLNYSIISAAASGYTDVDDS 174
FP T V EN +G+ V TD D G ++ I+ + +V S
Sbjct: 353 VKFRYFPATSRYASVDENAQVGTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQSS 412
Query: 175 WKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
+V L+ L+ + D E Y T+
Sbjct: 413 ----KVPNLS-LIKVASALDRERIPSYNLTV 438
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++P TG ++V LD +T +L +L V D G P S L +TL+D NDN P
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAV-DSGTPSATGSAS----LLVTLEDINDNGP 3508
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAAS 166
++E V EN+ G+ V T ++TD D + G Y ++S +
Sbjct: 3509 MLTVSE--GEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYYLLSTGPA 3554
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGK-PPLDSPLSSITHLKITLQDENDNAP 119
+DPL G + PL+ G+SE + V+DGG P DS T + + ++ D P
Sbjct: 2515 IDPLRGAIMAAGPLN---GASEVTFSVHVKDGGSFPKTDS-----TTVTVRFVNKAD-FP 2565
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
K E EN+P+ S V T + + +G+ ++Y I ASG + F+
Sbjct: 2566 KVRAKEQTFMFPENQPVSSLVTTITGSSL-RGE--PMSYYI----ASG-----NLGNTFQ 2613
Query: 180 VDALTGLVTTNAVFDYEARSRY 201
+D LTG V+ + D+E +Y
Sbjct: 2614 IDQLTGQVSISQPLDFEKIQKY 2635
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 103 SITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
S T L I LQ + P F +Y+ + E EPIG++V + A +G + Y I+S
Sbjct: 1613 STTELTIILQGLD--GPVFTQPKYITILKEGEPIGTNVISIEAAS-PRGSEAPVEYYIVS 1669
Query: 163 AAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
T +LF + TG++ T A+ D E
Sbjct: 1670 VRCEEKT----VGRLFTIGRHTGIIQTAAILDRE 1699
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 96 PLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGK 155
P+++ ++ ++ I + D NDN P F I++ + IGS + T A D D+G G+
Sbjct: 1504 PIETRRYALKNVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGE 1562
Query: 156 LNYSIISA 163
+ Y II+
Sbjct: 1563 IEYEIING 1570
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 57 AIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEND 116
A+ A++ TG L +D ++ S+ + ++ + P T +++ ++D ND
Sbjct: 79 ALFAINSSTGALYTTSTIDRESLPSDVINLVVLSSAPTYP--------TEVRVLVRDLND 130
Query: 117 NAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYG--KLNYSIISAAASG 167
NAP FP + E+ G V ATD D G G +Y II +G
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHRSYRIIRGNEAG 183
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 25/156 (16%)
Query: 107 LKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK-GDYGKLNYSIISAAA 165
+ +T+ D ND P F + Y + E PIG+ V A D D + + +Y I S
Sbjct: 3391 VNVTVLDAND-PPIFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNE 3449
Query: 166 SGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS------------VWT 213
+G F ++ TG +T A D E Y ++L+ S V
Sbjct: 3450 NG---------AFSINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTL 3500
Query: 214 RSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTD 249
+ + PM L + G V + + TL STD
Sbjct: 3501 EDINDNGPM--LTVSEGEVMENKRPGTLVMTLQSTD 3534
>sp|Q5DRD5|PCDBE_PANTR Protocadherin beta-14 OS=Pan troglodytes GN=PCDHB14 PE=3 SV=1
Length = 798
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + + LDY+ +E L L DGG PP S T + I + D NDNAP+FP + Y
Sbjct: 194 LVLDRALDYEQ-EAELRLTLTAVDGGSPPK----SGTTLVLIKVLDINDNAPEFPQSLYE 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V E+ P+GS + T A D+D G+YGK++Y+ A+ +D K F ++ ++G V
Sbjct: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHAS-------EDIRKTFEINPISGEV 301
Query: 188 TTNAVFDYEARSRYAFTLLST 208
+ D+E Y + +T
Sbjct: 302 NLRSPLDFEVIQSYTINIQAT 322
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L ++ LD ++ +E+ + + V D G P L + ++ + + D NDNAP F T Y
Sbjct: 403 LVSEKALDRES-QAEYNITITVTDLGTPRLKTEY----NITVLVSDVNDNAPAFTQTSYT 457
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA------ASGYTDVDDSWKLFRVD 181
F+ EN + + ATD D G ++ YS++ AS + D+ LF +
Sbjct: 458 LFLRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPQLPLASLVSINADNGHLFALR 517
Query: 182 ALTGLVTTNAVFDYEARSRYAFTLLST 208
+L DYEA + F + +T
Sbjct: 518 SL----------DYEALQEFEFRVGAT 534
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P++G ++++ PLD++ S + I + GG LS L + + D NDN P+
Sbjct: 294 INPISGEVNLRSPLDFEVIQSYTINIQATDGGG-------LSGKCTLLVKVMDINDNPPE 346
Query: 121 FPITEYLEFVGENEPIGSSVFTARAT--DMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
I+ + + EN S A + D D GD G++ SI D+ F
Sbjct: 347 VTISSITKRIPEN---ASETLVALFSILDQDSGDNGRMICSI-----------QDNLPFF 392
Query: 179 RVDALTGLVT--TNAVFDYEARSRYAFTLLST 208
T + D E+++ Y T+ T
Sbjct: 393 LKPTFKNFFTLVSEKALDRESQAEYNITITVT 424
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
L++PL +++ ++D ND++P F E L + E +G++ A D+D G
Sbjct: 110 LENPLQ-FFRVELRVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQ 168
Query: 157 NYSIISAAASGYTDVDDS 174
NY+ IS + Y + DS
Sbjct: 169 NYT-ISPNSHFYIKIPDS 185
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 51/238 (21%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DP +G+++ LDY+ L+++ DGG PPL +S + + LQD NDN P
Sbjct: 522 SIDPTSGIITTAASLDYELEPQPQLIVVAT-DGGLPPL----ASSATVSVALQDVNDNEP 576
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F T Y + E G+ ATD D G +G L+YS+ + S + FR
Sbjct: 577 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGS------PPFR 630
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARS 239
+DA +G V T D + + S
Sbjct: 631 IDAHSGDVCTTRTLDRD---------------------------------------QGPS 651
Query: 240 RYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLR 297
+ FT+ + D GG V V+V + ++ PQF R + +S P G V LR
Sbjct: 652 SFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS-PPGTAVLRLR 708
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG LSV +PLD + +EH+L + D G PP S+ L +++ D ND AP F
Sbjct: 1598 TGALSVVRPLDREQ-RAEHVLTVVASDHGSPPR----SATQVLTVSVADVNDEAPTFQQQ 1652
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
EY + EN P G+S+ T RATD D G G++ Y +S+ + F +D T
Sbjct: 1653 EYSVLLRENNPPGTSLLTLRATDPDVGANGQVTYGGVSS------------ESFSLDPDT 1700
Query: 185 GLVTTNAVFDYEARSRYAFTL 205
G++TT D E + T+
Sbjct: 1701 GVLTTLRALDREEQEEINLTV 1721
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G + + LD D G S + DGG L S+ ++K+ L DENDN P+
Sbjct: 631 IDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDGGG------LKSMVYVKVFLSDENDNPPQ 684
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F EY + P G++V RA D D+G +G+L+Y I++ +S LF +
Sbjct: 685 FYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAG---------NSPPLFTL 735
Query: 181 DALTGLVT 188
D +GL+T
Sbjct: 736 DEQSGLLT 743
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 56/235 (23%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G L + LD +T + L++ + G ++ + I +QD ND+ P
Sbjct: 2652 LDESSGTLRLAHALDCETQARHQLVVQAADPAGA------HFALAPVTIEVQDVNDHGPA 2705
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP+ V EN+P G+ V T A D D G +G+L YS++ A + + F +
Sbjct: 2706 FPLNLLSTSVAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLEAGPG-----PEGREAFAL 2760
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240
++ TG E R+R F DYE
Sbjct: 2761 NSSTG----------ELRARVPF------------------------------DYEHTES 2780
Query: 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGH 295
+ + + D+G + V V V + DE+ P F F F +P G GH
Sbjct: 2781 FRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHF-----QVPEGARRGH 2830
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHL-LILKVEDGGKPPLDSPLSSITHLKITLQDENDNA 118
++ P TG ++V+ D S L L+L+ E GG + T L +TLQD NDNA
Sbjct: 2116 SIQPSTGAITVRSAEGLDFEVSPRLRLVLQAESGGA-------FAFTVLTLTLQDANDNA 2168
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+F Y+ F+ E+ P+ + A D+D+G G+++YS+ ++ + LF
Sbjct: 2169 PRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAAS--------QPARGLF 2220
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIM 227
VD TG +TT A+ D E + L++T + +LV S + +++
Sbjct: 2221 HVDPTTGTITTTAILDREIWAETRLVLMAT-DRGSPALVGSATLTVMVI 2268
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G +PLD + + L I + DGG+P L S+ L +T+ D ND+AP
Sbjct: 1800 LDLASGEFGTMRPLDREVEPAFQLRI-EARDGGQPAL----SATLLLTVTVLDANDHAPA 1854
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP+ Y V E+ P G+ + +A D D G G + Y + + A F +
Sbjct: 1855 FPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGANGHVTYYLGAGTAGA----------FLL 1904
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
+ +G + T A D E Y F++
Sbjct: 1905 EPSSGELRTAAALDREQCPSYTFSV 1929
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 59/227 (25%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G +S+ PLD++ L +L D P +L + ++D NDNAP F +
Sbjct: 2329 GRVSLTGPLDFEQCDRYQLQLLA--------HDGPHEGRANLTVLVEDVNDNAPAFSQSL 2380
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y + E+ P GS++ + ATD D G G ++Y + S A F VD G
Sbjct: 2381 YQVMLLEHTPPGSAILSVSATDRDSGANGHISYHLASPADG-----------FSVDPNNG 2429
Query: 186 LVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTL 245
+ FT++ T V ++ L
Sbjct: 2430 TL---------------FTIVGT----------------------VALGHDGSGAVDVVL 2452
Query: 246 LSTDSG--GRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVG 290
+ D G GR + V V+++ +++ P FT ++ ++ DLP G
Sbjct: 2453 EARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVT-EDLPPG 2498
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVE--DGGKPPLDSPLSSITHLKITLQDENDN 117
++P +G L V+ LD + ++ L ILKV G K L + T +++++ ++N++
Sbjct: 1046 GLEPQSGWLWVRAALDRE---AQELYILKVMAVSGSKAELGQQTGTAT-VRVSILNQNEH 1101
Query: 118 APKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+P+ V EN+P G+SV ATD D G G+L YS+ + + K
Sbjct: 1102 SPRLSEDPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSL--------QQLSEDSKA 1153
Query: 178 FRVDALTGLVTTNAVFDYEARSRY 201
FR+ TG VTT D E +S Y
Sbjct: 1154 FRIHPQTGEVTTLQTLDREQQSSY 1177
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
S ++L L+ DGG PP + L +TL D ND+AP F + Y V E+ GS V
Sbjct: 219 SHYMLQLEAYDGGSPPR----RAQALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPV 274
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR 198
A+D D G G + Y I + G F +DA TGL+ D+E R
Sbjct: 275 LQVFASDADAGVNGAVTYEINRRQSEGD-------GPFSIDAHTGLLQLERPLDFEQR 325
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G L + +PLD+++ +++ L + D G+PP SS+ + +T+ D NDN P F
Sbjct: 2552 GCLVLLEPLDFES-LTQYNLTVAAADRGQPPQ----SSVVPVTVTVLDVNDNPPVFTRAS 2606
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+G+ + A+D D G +G + +++ S SG LF +D +G
Sbjct: 2607 YRVTVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSG---------LFELDESSG 2657
Query: 186 LVTTNAVFDYEARSRY 201
+ D E ++R+
Sbjct: 2658 TLRLAHALDCETQARH 2673
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 57/258 (22%)
Query: 60 AVDPLTGVLSV---QQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEND 116
+VDP G L L +D GS ++L+ D G P ++ + + LQD+ND
Sbjct: 2423 SVDPNNGTLFTIVGTVALGHD-GSGAVDVVLEARDHGAPGR----AARATVHVQLQDQND 2477
Query: 117 NAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG-DYGKLNYSIISAAASGYTDVDDSW 175
+AP F ++ Y V E+ P GS++ T ATD D + ++YSIIS +W
Sbjct: 2478 HAPSFTLSHYRVAVTEDLPPGSTLLTLEATDADGSRSHAAVDYSIISG----------NW 2527
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDY 235
VF E R A + R + CL++ D+
Sbjct: 2528 --------------GRVFQLEPRLAEA---------GESAGPGPRALGCLVLLE--PLDF 2562
Query: 236 EARSRYAFTLLSTDSG--GRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVV 293
E+ ++Y T+ + D G ++ V V V + ++ P FT +++ + D PVG +
Sbjct: 2563 ESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTVP-EDTPVGAEL 2621
Query: 294 GHLR----------LVRF 301
H+ LVRF
Sbjct: 2622 LHVEASDADPGPHGLVRF 2639
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 47 TIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITH 106
T+ LS + ++D ++G+L +PLD + +L L+V G P P ++
Sbjct: 825 TLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGP--VLELEVRAGSGVP---PAFAVAR 879
Query: 107 LKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAAS 166
+++ L D NDN+P FP E + N G+ ++T RA D D G ++ +++++
Sbjct: 880 VRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNSRVTFTLLAGGGG 939
Query: 167 GYT 169
+T
Sbjct: 940 AFT 942
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 31/156 (19%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+ P TG ++ Q LD + SS LL+ +V+DGG P P S+ + + + D NDN+P
Sbjct: 1156 IHPQTGEVTTLQTLDREQQSSYQLLV-QVQDGGSP----PRSTTGTVHVAVLDLNDNSPT 1210
Query: 121 F-----------PITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
F PI V + P G+ V T +A D D+G+ G + Y++ +
Sbjct: 1211 FLQASGAAGGGLPIQ-----VPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGS---- 1261
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
+LF + +G + T A R Y TL
Sbjct: 1262 ------ELFSLHPHSGELLTAAPLIRAERPHYVLTL 1291
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEY-LEFVGENEPIGSSVFTA 143
L + D G PPL + + + H+ D NDNAP F Y E + E GS V
Sbjct: 440 LRVTATDSGSPPLRAEAAFVLHVT----DVNDNAPAFDRQLYRPEPLPEVALPGSFVVRV 495
Query: 144 RATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203
A D D+G G++ YS+ A + W F +D +G++TT A DYE +
Sbjct: 496 TARDPDQGTNGQVTYSLAPGAHT-------HW--FSIDPTSGIITTAASLDYELEPQPQL 546
Query: 204 TLLST 208
+++T
Sbjct: 547 IVVAT 551
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITH--LKITLQDENDN 117
++DP TGVL+ + LD + E L + +D G PP +TH +++ ++DEND+
Sbjct: 1695 SLDPDTGVLTTLRALDREE-QEEINLTVYAQDRGSPP------QLTHVTVRVAVEDENDH 1747
Query: 118 APKFPITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
AP F LE +P ++ RA+D D G G+L Y I+ SG
Sbjct: 1748 APTFGSAHLSLEVPEGQDP--QTLTMLRASDPDVGANGQLQYRILDGDPSG 1796
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D +G L + +PLD++ G L ++ E G + + +++ +QDEN++AP
Sbjct: 1380 ALDAASGRLYLARPLDFEAGPPWRALTVRAEGPG-----GAGARLLRVQVQVQDENEHAP 1434
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAASGYTDVDDSWKLF 178
F + EN G++++T RA+D D G + Y ++ +
Sbjct: 1435 AFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQ--------EPPVPAL 1486
Query: 179 RVDALTGLVTTNAVFDYE 196
R+DA TG ++ D E
Sbjct: 1487 RLDARTGALSAPRGLDRE 1504
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L +++PLD++ H L+++ DGG P + + ++D NDN P
Sbjct: 306 SIDAHTGLLQLERPLDFEQ-RRVHELVVQARDGGA----HPELGSAFVTVHVRDANDNQP 360
Query: 120 KFPI----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
+ + V E P G V +D D GD+ +N S+ + +
Sbjct: 361 SMTVIFLSADGSPQVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGG--------EGHF 412
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
L D++ LV D E R Y + +T S
Sbjct: 413 ALSTQDSVIYLVCVARRLDREERDAYNLRVTATDS 447
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 20/179 (11%)
Query: 35 GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSV-QQPLDYDTGSSEHLLILKVEDGG 93
G+ + + R GT P VD TG + V + P+ G + +L + D G
Sbjct: 1994 GANASILYRLAGTPPPGT-------TVDSYTGEIRVARSPVAL--GPRDRVLFIVATDLG 2044
Query: 94 KPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDY 153
+P S+ + + LQ E + P+FP + EN P G+ + + RA G
Sbjct: 2045 RPAR----SATGVIIVGLQGEAERGPRFPRASSEATIRENAPPGTPIVSPRAVHA-GGTN 2099
Query: 154 GKLNYSIISAAASGYTDVDDSWKLFRVDALTGL-----VTTNAVFDYEARSRYAFTLLS 207
G + YSI+S G + S V + GL V E+ +AFT+L+
Sbjct: 2100 GPITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEVSPRLRLVLQAESGGAFAFTVLT 2158
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L Q+ + +D TG LS + LD +T + L+L VE +P S +
Sbjct: 1477 LRQEPPVPALRLDARTGALSAPRGLDRETTPA---LLLLVEATDRPANASRRRAARVSAR 1533
Query: 110 T-LQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGY 168
+ DENDNAP F + E++P G + A D D G+ +++Y + S G+
Sbjct: 1534 VFVTDENDNAPVFASPSRVRLP-EDQPPGPAALHVVARDPDLGEAARVSYRLAS-GGDGH 1591
Query: 169 TDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
FR+ + TG ++ D E R+ + T++++
Sbjct: 1592 ---------FRLHSSTGALSVVRPLDREQRAEHVLTVVAS 1622
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 88/238 (36%), Gaps = 55/238 (23%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDN--A 118
VDP TG + + +PL +G H L L+ DGG P P +S L++ +QD A
Sbjct: 943 VDPTTGHVRLMRPLG-PSGGPAHELELEARDGGSP----PRTSHFRLRVVVQDVGTRGLA 997
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+F Y + G+ V +A D G + Y + + AS F
Sbjct: 998 PRFNSPTYRVDLPSGTTAGTQVLQVQAQAPDG---GPITYHLAAEGAS---------SPF 1045
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEAR 238
++ +G + A D EA+ Y ++
Sbjct: 1046 GLEPQSGWLWVRAALDREAQELYILKVM-------------------------------- 1073
Query: 239 SRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHL 296
A + + G +T VRV I +++E P+ +E F+ + P G VG +
Sbjct: 1074 ---AVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDP-TFLAVAENQPPGTSVGRV 1127
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 99 SPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNY 158
+P + + + + D ND+AP FP V E+ G+ A D D G G Y
Sbjct: 121 TPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGTRYPLEPARDADAGRLGTQGY 180
Query: 159 SIISAAASGYTDVDDSWKLFRVDALTG--------LVTTNAVFDYEARSRYAFTL 205
++ SG D + + FR++ G LV T D E RS Y L
Sbjct: 181 AL-----SG----DGAGETFRLETRPGPDGTPVPELVVTGE-LDRENRSHYMLQL 225
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGS----SVFTARATDMDKGDYGK 155
PLS+ + IT++D ND+AP FP + + P S ++ T RA D D G
Sbjct: 1939 PLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDAGANAS 1998
Query: 156 LNYSIISAAASGYTDVDDSWKLFRV 180
+ Y + G T VD RV
Sbjct: 1999 ILYRLAGTPPPGTT-VDSYTGEIRV 2022
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHL-KITLQDENDNA 118
A+D LTG + V PLD++ E+ L ++ +D G+PPL S+ T L I + D ND+A
Sbjct: 585 AIDSLTGEIQVMAPLDFEA-EREYALRIRAQDAGRPPL----SNNTGLASIQVVDINDHA 639
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P F T + V EN P+G SV +A D D G+ +L YS+ A+ F
Sbjct: 640 PIFVSTPFQVSVLENAPLGHSVIHIQAVDADHGENSRLEYSLTGVASD---------TPF 690
Query: 179 RVDALTGLVTTNAVFDYEARSRYAF 203
+++ TG V+ + D E+ Y F
Sbjct: 691 VINSATGWVSVSGPLDRESVEHYFF 715
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G++S +D + S L++ + G +P P S+ + IT+ DENDNAP+
Sbjct: 479 IDPRSGLISTSGRVDREHMESYELVVEASDQGQEP---GPRSATVRVHITVLDENDNAPQ 535
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y+ V E+ + V ATD DK G ++Y+IIS + G+ F +
Sbjct: 536 FSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGH---------FAI 586
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
D+LTG + A D+EA YA +
Sbjct: 587 DSLTGEIQVMAPLDFEAEREYALRI 611
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G++ + LD + L V D G PPL +P+S +++T+QD NDNAP
Sbjct: 1003 IEPTSGIVRTVRRLDREAVPVYELTAYAV-DRGVPPLRTPVS----IQVTVQDVNDNAPV 1057
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP E+ V EN +GS V A D D G + Y I+ + +LF++
Sbjct: 1058 FPAEEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQIVEG---------NIPELFQM 1108
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G +T DYEAR Y + +T
Sbjct: 1109 DIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G +++Q PLDY+ + + L + D G P + T++++ + D NDNAP+
Sbjct: 897 IDADSGAITLQAPLDYEDQVT-YTLAITARDNGIPQK----ADTTYVEVMVNDVNDNAPQ 951
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + Y V E+ P +SV ATD D G++ Y+ + + +D F +
Sbjct: 952 FVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRVQYT--------FQNGEDGDGDFTI 1003
Query: 181 DALTGLVTTNAVFDYEARSRYAFT 204
+ +G+V T D EA Y T
Sbjct: 1004 EPTSGIVRTVRRLDREAVPVYELT 1027
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 45/229 (19%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L + L + ++DP +G++ LD ++ H L + +D G P L S+ T + +
Sbjct: 358 LMNSRSLELFSIDPQSGLIRTAAALDRES-MERHYLRVTAQDHGSPRL----SATTMVAV 412
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
T+ D ND+AP F +Y E + EN G + RATD D L Y + + A
Sbjct: 413 TVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTA 472
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRR 229
F +D +GL++T+ D E Y +
Sbjct: 473 AA----AAFEIDPRSGLISTSGRVDREHMESYELVV------------------------ 504
Query: 230 GVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTF 278
EA + + G R+ V+V + + ++ PQF+E+ +
Sbjct: 505 ------EASDQ------GQEPGPRSATVRVHITVLDENDNAPQFSEKRY 541
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+FP Y V ENE G+SV A D D G+ G+L YS+ + S S +LF
Sbjct: 314 PQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNS------RSLELF 367
Query: 179 RVDALTGLVTTNAVFDYEARSRY 201
+D +GL+ T A D E+ R+
Sbjct: 368 SIDPQSGLIRTAAALDRESMERH 390
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ PLDY L++ D L ++ I + D N + P F
Sbjct: 802 GLVTLALPLDYKQERYFKLVLTAS--------DRALHDHCYVHINITDANTHRPVFQSAH 853
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y + E+ P+GS+V A+D D G+ ++ Y + +D+ FR+DA +G
Sbjct: 854 YSVSMNEDRPVGSTVVVISASDDDVGENARITYLL-----------EDNLPQFRIDADSG 902
Query: 186 LVTTNAVFDYEARSRYAFTL 205
+T A DYE + Y +
Sbjct: 903 AITLQAPLDYEDQVTYTLAI 922
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLI-LKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ TG +SV PLD + S EH ++ D G PPL S+ + +T+ D NDN P
Sbjct: 692 INSATGWVSVSGPLDRE--SVEHYFFGVEARDHGSPPL----SASASVTVTVLDVNDNRP 745
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F + EY + E+ +G+SV + A D D ++Y I + +
Sbjct: 746 EFTMKEYHLRLNEDAAVGTSVVSVTAVDRDANS--AISYQITGGNTRNRFAISTQGGV-- 801
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
GLVT DY+ + RY F L+ T S
Sbjct: 802 -----GLVTLALPLDYK-QERY-FKLVLTAS 825
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G++S +D + S L++ + G +P P S+ + IT+ DENDNAP+
Sbjct: 479 IDPRSGLISTSGRVDREHMESYELVVEASDQGQEP---GPRSATVRVHITVLDENDNAPQ 535
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y+ V E+ + V ATD DK G ++Y+IIS + G+ F +
Sbjct: 536 FSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGH---------FAI 586
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
D+LTG + A D+EA YA +
Sbjct: 587 DSLTGEIQVMAPLDFEAEREYALRI 611
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHL-KITLQDENDNA 118
A+D LTG + V PLD++ E+ L ++ +D G+PPL S+ T L I + D ND++
Sbjct: 585 AIDSLTGEIQVMAPLDFEA-EREYALRIRAQDAGRPPL----SNNTGLASIQVVDINDHS 639
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P F T + V EN P+G SV +A D D G+ +L YS+ A+ F
Sbjct: 640 PIFVSTPFQVSVLENAPLGHSVIHIQAVDADHGENSRLEYSLTGVASD---------TPF 690
Query: 179 RVDALTGLVTTNAVFDYEARSRYAF 203
+++ TG V+ + D E+ Y F
Sbjct: 691 VINSATGWVSVSGPLDRESVEHYFF 715
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G++ + LD + L V D G PPL +P+S +++T+QD NDNAP
Sbjct: 1003 IEPTSGIVRTVRRLDREAVPVYELTAYAV-DRGVPPLRTPVS----IQVTVQDVNDNAPV 1057
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP E+ V EN +GS V A D D G + Y I+ + +LF++
Sbjct: 1058 FPAEEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQIVEG---------NIPELFQM 1108
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G +T DYEAR Y + +T
Sbjct: 1109 DIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G +++Q PLDY+ + + L + D G P + T++++ + D NDNAP+
Sbjct: 897 IDADSGAITLQAPLDYEDQVT-YTLAITARDNGIPQK----ADTTYVEVMVNDVNDNAPQ 951
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + Y V E+ P +SV ATD D G++ Y+ + + +D F +
Sbjct: 952 FVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRVQYT--------FQNGEDGDGDFTI 1003
Query: 181 DALTGLVTTNAVFDYEARSRYAFT 204
+ +G+V T D EA Y T
Sbjct: 1004 EPTSGIVRTVRRLDREAVPVYELT 1027
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 45/229 (19%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L + L + ++DP +G++ LD ++ H L + +D G P L S+ T + +
Sbjct: 358 LMNSRSLELFSIDPQSGLIRTAAALDRES-MERHYLRVTAQDHGSPRL----SATTMVAV 412
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
T+ D ND+AP F +Y E + EN G + RATD D L Y + + A+
Sbjct: 413 TVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTA 472
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRR 229
F +D +GL++T+ D E Y +
Sbjct: 473 AA----AAFEIDPRSGLISTSGRVDREHMESYELVV------------------------ 504
Query: 230 GVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTF 278
EA + + G R+ V+V + + ++ PQF+E+ +
Sbjct: 505 ------EASDQ------GQEPGPRSATVRVHITVLDENDNAPQFSEKRY 541
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ PLDY L++ D L ++ I + D N + P F
Sbjct: 802 GLVTLALPLDYKQERYFKLVLTAS--------DRALHDHCYVHINITDANTHRPVFQSAH 853
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y + E+ P+GS+V A+D D G+ ++ Y + +D+ FR+DA +G
Sbjct: 854 YSVSMNEDRPVGSTVVVISASDDDVGENARITYLL-----------EDNLPQFRIDADSG 902
Query: 186 LVTTNAVFDYEARSRYAFTL 205
+T A DYE + Y +
Sbjct: 903 AITLQAPLDYEDQVTYTLAI 922
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+FP Y V ENE G++V A D D G+ G+L YS+ + S S +LF
Sbjct: 314 PQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNS------RSLELF 367
Query: 179 RVDALTGLVTTNAVFDYEARSRY 201
+D +GL+ T A D E+ R+
Sbjct: 368 SIDPQSGLIRTAAALDRESMERH 390
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLI-LKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ TG +SV PLD + S EH ++ D G PPL S+ + +T+ D NDN P
Sbjct: 692 INSATGWVSVSGPLDRE--SVEHYFFGVEARDHGSPPL----SASASVTVTVLDVNDNRP 745
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F + EY + E+ +G+SV + A D D ++Y I + +
Sbjct: 746 EFTMKEYHLRLNEDAAVGTSVVSVTAVDRDANS--AISYQITGGNTRNRFAISTQGGM-- 801
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
GLVT DY+ + RY F L+ T S
Sbjct: 802 -----GLVTLALPLDYK-QERY-FKLVLTAS 825
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G++S +D + S L++ + G +P P S+ + IT+ DENDNAP+
Sbjct: 488 IDPRSGLISTSGRVDREHMESYELVVEASDQGQEP---GPRSATVRVHITVLDENDNAPQ 544
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y+ V E+ + V ATD DK G ++Y+IIS + G+ F +
Sbjct: 545 FSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGH---------FAI 595
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
D+LTG + A D+EA YA +
Sbjct: 596 DSLTGEIQVVAPLDFEAEREYALRI 620
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G++ + LD + S L V D G PPL +P+S +++ +QD NDNAP
Sbjct: 1012 IEPTSGIVRTVRRLDREAVSVYELTAYAV-DRGVPPLRTPVS----IQVMVQDVNDNAPV 1066
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP E+ V EN +GS V A D D+G + Y I+ + +LF++
Sbjct: 1067 FPAEEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQIVEG---------NIPELFQM 1117
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G +T DYEAR Y + +T
Sbjct: 1118 DIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHL-KITLQDENDNA 118
A+D LTG + V PLD++ E+ L ++ +D G+PPL S+ T L I + D ND+
Sbjct: 594 AIDSLTGEIQVVAPLDFEA-EREYALRIRAQDAGRPPL----SNNTGLASIQVVDINDHI 648
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P F T + V EN P+G SV +A D D G+ +L YS+ A F
Sbjct: 649 PIFVSTPFQVSVLENAPLGHSVIHIQAVDADHGENARLEYSLTGVAPD---------TPF 699
Query: 179 RVDALTGLVTTNAVFDYEARSRYAF 203
+++ TG V+ + D E+ Y F
Sbjct: 700 VINSATGWVSVSGPLDRESVEHYFF 724
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G +++Q PLDY+ + + L + D G P + T++++ + D NDNAP+
Sbjct: 906 IDADSGAITLQAPLDYEDQVT-YTLAITARDNGIPQK----ADTTYVEVMVNDVNDNAPQ 960
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + Y V E+ P +SV ATD D G++ Y+ + + +D F +
Sbjct: 961 FVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRVQYT--------FQNGEDGDGDFTI 1012
Query: 181 DALTGLVTTNAVFDYEARSRYAFT 204
+ +G+V T D EA S Y T
Sbjct: 1013 EPTSGIVRTVRRLDREAVSVYELT 1036
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 45/229 (19%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L + L + ++DP +G++ LD ++ H L + +D G P L S+ T + +
Sbjct: 367 LMNSRSLELFSIDPQSGLIRTAAALDRES-MERHYLRVTAQDHGSPRL----SATTMVAV 421
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
T+ D ND++P F +Y E + EN G + RATD D L Y + A+
Sbjct: 422 TVADRNDHSPVFEQAQYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAA 481
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRR 229
F +D +GL++T+ D E Y +
Sbjct: 482 AA----AAFEIDPRSGLISTSGRVDREHMESYELVV------------------------ 513
Query: 230 GVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTERTF 278
EA + + G R+ V+V + + ++ PQF+E+ +
Sbjct: 514 ------EASDQ------GQEPGPRSATVRVHITVLDENDNAPQFSEKRY 550
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++++ PLDY L++ D L ++ I + D N + P F
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTAS--------DRALHDHCYVHINITDANTHRPVFQSAH 862
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P+GS++ A+D D G+ ++ Y + +D+ FR+DA +G
Sbjct: 863 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLL-----------EDNLPQFRIDADSG 911
Query: 186 LVTTNAVFDYEARSRYAFTL 205
+T A DYE + Y +
Sbjct: 912 AITLQAPLDYEDQVTYTLAI 931
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+FP Y V ENE G++V A D D G+ G+L YS+ + S S +LF
Sbjct: 323 PQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNS------RSLELF 376
Query: 179 RVDALTGLVTTNAVFDYEARSRY 201
+D +GL+ T A D E+ R+
Sbjct: 377 SIDPQSGLIRTAAALDRESMERH 399
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLI-LKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ TG +SV PLD + S EH ++ D G PPL S+ + +T+ D NDN P
Sbjct: 701 INSATGWVSVSGPLDRE--SVEHYFFGVEARDHGSPPL----SASASVTVTVLDVNDNRP 754
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F + EY + E+ +G+SV + A D D ++Y I + +
Sbjct: 755 EFTMKEYHLRLNEDAAVGTSVVSVTAVDRDANS--AISYQITGGNTRNRFAISTQGGV-- 810
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
GLVT DY+ + RY F L+ T S
Sbjct: 811 -----GLVTLALPLDYK-QERY-FKLVLTAS 834
>sp|Q9Y5G8|PCDG5_HUMAN Protocadherin gamma-A5 OS=Homo sapiens GN=PCDHGA5 PE=2 SV=1
Length = 931
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L ++QPLD + + H L+L DGG P L S TH+++T+ D NDNAP F +EY
Sbjct: 194 LVLEQPLDREK-ETVHDLLLTALDGGDPVL----SGTTHIRVTVLDANDNAPLFTPSEYS 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V EN P+G+ + ATD D+G GKL YS + + + F++D+ G +
Sbjct: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSF-------RNEEEKISETFQLDSNLGEI 301
Query: 188 TTNAVFDYEARSRYAFTLLS 207
+T DYE Y +++
Sbjct: 302 STLQSLDYEESRFYLMEVVA 321
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 80 SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSS 139
+S++ + L V D G PPL S+ +H+ + + D NDN P FP Y V EN P G S
Sbjct: 415 TSDYNITLTVMDHGTPPL----STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVS 470
Query: 140 VFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
+F+ A D D GD ++ YS+ G +++ TG++ FDYE
Sbjct: 471 IFSVTAHDPDSGDNARVTYSLAEDTFQGAP----LSSYVSINSDTGVLYALRSFDYE 523
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D G +S Q LDY+ S +L+ + +DGG L + + +T+QD NDNAP+
Sbjct: 294 LDSNLGEISTLQSLDYEE-SRFYLMEVVAQDGGA------LVASAKVVVTVQDVNDNAPE 346
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
+T + E+ G+ + D D G+ G++ SI
Sbjct: 347 VILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TGVL + DY+ L + D G PPL S +S L + + D+NDN P+ +P
Sbjct: 511 TGVLYALRSFDYEQLRDLQLWV-TASDSGNPPLSSNVS----LSLFVLDQNDNTPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FAVGLHTGEVRTARALLDRDA 637
>sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma-A5 OS=Pan troglodytes GN=PCDHGA5 PE=3 SV=1
Length = 931
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L ++QPLD + + H L+L DGG P L S TH+++T+ D NDNAP F +EY
Sbjct: 194 LVLEQPLDREK-ETVHDLLLTALDGGDPVL----SGTTHIRVTVLDANDNAPLFTPSEYS 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V EN P+G+ + ATD D+G GKL YS + + + F++D+ G +
Sbjct: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSF-------RNEEEKISETFQLDSNLGEI 301
Query: 188 TTNAVFDYEARSRYAFTLLS 207
+T DYE Y +++
Sbjct: 302 STLQSLDYEESRFYLMEVVA 321
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 80 SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSS 139
+S++ + L V D G PPL S+ +H+ + + D NDN P FP Y V EN P G S
Sbjct: 415 TSDYNITLTVMDHGTPPL----STESHIPLKVADVNDNPPNFPQASYSTSVPENNPRGVS 470
Query: 140 VFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
+F+ A D D GD ++ YS+ G +++ TG++ FDYE
Sbjct: 471 IFSVTAHDPDSGDNARVTYSLAEDTFQGAP----LSSYVSINSDTGVLYALRSFDYE 523
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D G +S Q LDY+ S +L+ + +DGG L + + +T+QD NDNAP+
Sbjct: 294 LDSNLGEISTLQSLDYEE-SRFYLMEVVAQDGGA------LVASAKVVVTVQDVNDNAPE 346
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR- 179
+T + E+ G+ + D D G+ G++ SI +KL +
Sbjct: 347 VILTSLTSSLSEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLP---------FKLEKS 397
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
VD LVTT D E S Y TL
Sbjct: 398 VDNYYHLVTTRD-LDREETSDYNITL 422
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TGVL + DY+ L + D G PPL S +S L + + D+NDN P+ +P
Sbjct: 511 TGVLYALRSFDYEQLRDLQLWV-TASDSGNPPLSSNVS----LSLFVLDQNDNTPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FAVGLHTGEVRTARALLDRDA 637
>sp|Q08174|PCDH1_HUMAN Protocadherin-1 OS=Homo sapiens GN=PCDH1 PE=1 SV=2
Length = 1060
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
L +KV+DGG PP +S L++T+ D NDNAPKF Y + EN PIG SV +
Sbjct: 248 LTIKVQDGGSPPR----ASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVK 303
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204
A D D+G ++ Y+ A + +L R+D TGL+T D E S F+
Sbjct: 304 ANDSDQGANAEIEYTFHQAP-------EVVRRLLRLDRNTGLITVQGPVDREDLSTLRFS 356
Query: 205 LLS 207
+L+
Sbjct: 357 VLA 359
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF--PITE 125
L PLDY+ + I+ V D G PPL SS LK+ + D NDNAP F +TE
Sbjct: 458 LQTTTPLDYEKVKDYTIEIVAV-DSGNPPL----SSTNSLKVQVVDVNDNAPVFTQSVTE 512
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI-ISAAASGYTDVDDSWKLFRVDALT 184
+ F N+P G + A+D D G +L YS+ AA G LF + T
Sbjct: 513 -VAFPENNKP-GEVIAEITASDADSGSNAELVYSLEPEPAAKG---------LFTISPET 561
Query: 185 GLVTTNAVFDYEARSRYAFTLLS 207
G + D E R Y +++
Sbjct: 562 GEIQVKTSLDREQRESYELKVVA 584
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSP-LSSITHLKITLQDENDNAP 119
+ P TG + V+ LD + S L ++ + G SP L + + + D NDN P
Sbjct: 557 ISPETGEIQVKTSLDREQRESYELKVVAADRG------SPSLQGTATVLVNVLDCNDNDP 610
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
KF ++ Y V EN P S V D DKG+ ++ S V+ F
Sbjct: 611 KFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLS-----------VEQDNGDFV 659
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+ TG + ++ FD E +S Y F L
Sbjct: 660 IQNGTGTILSSLSFDREQQSTYTFQL 685
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF--PITEYLEFVGENEPIGS 138
S + LK DGG PP S+ + I + DENDNAP P + + +G
Sbjct: 679 STYTFQLKAVDGGVPPR----SAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGE 734
Query: 139 SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVT 188
+V A D D G +L YSI + + LF++ + +G +T
Sbjct: 735 TVSQVAAEDFDSGVNAELIYSIAGG---------NPYGLFQIGSHSGAIT 775
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 32/162 (19%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI- 123
TG+++VQ P+D + S+ +L + G +P S+ + +T++D NDNAP I
Sbjct: 336 TGLITVQGPVDREDLSTLRFSVLAKDRG-----TNPKSARAQVVVTVKDMNDNAPTIEIR 390
Query: 124 -------TEYLEFVGENEPIGSSVFTARATDMDKGD--------YGKLNYSIISAAASGY 168
+ + + E+ ++V + +D D+G+ G + + + A+ +G
Sbjct: 391 GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETG- 449
Query: 169 TDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
DS K + + T DYE Y +++ S
Sbjct: 450 ---SDSKKKY-------FLQTTTPLDYEKVKDYTIEIVAVDS 481
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 108 KITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
+I +QD NDN P F + EN IGS A+D D G G +Y +
Sbjct: 155 QIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYEL 207
>sp|Q5DRC8|PCDB6_PANTR Protocadherin beta-6 OS=Pan troglodytes GN=PCDHB6 PE=3 SV=1
Length = 794
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + +PLD + L ++ + DGG PP S + ++I + D NDN P+F Y
Sbjct: 193 LVLDKPLDREEQPQLRLTLIAL-DGGSPPR----SGTSEIQIQVLDINDNVPEFAEELYE 247
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V EN P+GS V T A D+D G +GK++Y++ VDD + F ++A+TG +
Sbjct: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQ--------VDDVNQPFEINAITGEI 299
Query: 188 TTNAVFDYEARSRYAFTLLST 208
D+E Y + +T
Sbjct: 300 RLRKALDFEEIQSYDLDVEAT 320
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
+E+ + + V D G P L + S + + + D NDNAP F T Y FV EN +
Sbjct: 413 AEYNITITVTDLGTPRLKTQQS----ITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHI 468
Query: 141 FTARATDMDKGDYGKLNYSIISAA------ASGYTDVDDSWKLFRVDALTGLVTTNAVFD 194
+ ATD D G ++ YS++ AS + D+ LF + +L D
Sbjct: 469 GSVSATDRDSGINAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSL----------D 518
Query: 195 YEARSRYAFTLLST 208
YEA + F + +T
Sbjct: 519 YEALQAFEFRVGAT 532
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ +TG + +++ LD++ S L + + GG LS L + + D NDNAP+
Sbjct: 292 INAITGEIRLRKALDFEEIQSYDLDVEATDGGG-------LSGKCSLLVRVLDVNDNAPE 344
Query: 121 FPITEYLEFVGENEP-IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
++ ++ + EN P I +VF+ +D D G N +I + + L R
Sbjct: 345 LTMSFFISPIPENLPEIIVAVFS--VSDADSGH----NQQVICSIENNLP------FLLR 392
Query: 180 --VDALTGLVTTNAVFDYEARSRYAFTLLST 208
V+ LVT A+ D E+R+ Y T+ T
Sbjct: 393 PTVENFYTLVTEGAL-DRESRAEYNITITVT 422
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 62 DPLTGVLSVQQPLDYDT--GSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
DP T L + + LD + GS+E L +L + L++PL + ++D ND+AP
Sbjct: 77 DPQTHDLLLNEKLDREELCGSTE-LCVLPFQVL----LENPLQ-FFQASLRVRDINDHAP 130
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+FP E L + E G A D+D G G Y+I S
Sbjct: 131 EFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISS 173
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 21 VVHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAV---DPLTGVLSVQQPLDYD 77
VV L+ G+T R GT+ S Q+ Q + DP++G LS LD +
Sbjct: 592 VVENAPTGTELLVLGATDRDLGDN-GTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDRE 650
Query: 78 TGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIG 137
+ L IL D G PP SS + ++L D NDN+P F +Y + ENEP G
Sbjct: 651 EQAFYCLSILAT-DLGSPPQ----SSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGG 705
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
S V T ATD D G G + YSI + S F++ A +G+++T D E
Sbjct: 706 SYVTTVSATDPDMGPNGTVKYSISAGDRS----------RFQIHAKSGVISTKMALDREE 755
Query: 198 RSRYAFTLLST 208
++ Y +++T
Sbjct: 756 KTAYQLQVVAT 766
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 61/236 (25%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DPLTG +S+ QPLD++ ++++ ++ DGG PP SS L IT+ D NDNAP
Sbjct: 2616 IDPLTGQVSISQPLDFEK-IQKYVVWIEARDGGFPPF----SSYEKLDITVLDINDNAPT 2670
Query: 121 FPITEYLEFVGEN-EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F ++ + EN P + T ATD D G G+L+Y I++ + F
Sbjct: 2671 FEEDPFVSEILENLSP--RKILTVSATDKDSGPNGQLDYEIVNG---------NQESSFT 2719
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARS 239
++ TG + RS+ RP+ D E S
Sbjct: 2720 INHATGEI--------------------------RSI---RPL-----------DREKIS 2739
Query: 240 RYAFTLLSTDSG--GRTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVV 293
Y T+ S+D G ++ VKV + I ++ P+F++ ++ + P+GY V
Sbjct: 2740 HYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVSENS--PLGYTV 2793
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 57 AIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEND 116
I A++ TGV+++ + LDY+ SS+H + + DGG + L +++ D ND
Sbjct: 3137 GIFAINSSTGVVTLAKALDYEM-SSKHEMTISATDGGW----VARTGYCSLTVSVIDVND 3191
Query: 117 NAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK 176
N+P F E+ V EN P G++V ATD D G + Y++ S +D D
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQS------SDSD---- 3241
Query: 177 LFRVDALTGLVTTNAVFDYEARSRYAFTL 205
LF +D G++TT D+E + Y T+
Sbjct: 3242 LFVIDPNMGVITTQGFLDFETKQSYHLTV 3270
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++ P TG + + + LD++T S + L + +D G+PP S +S + I ++D NDN P
Sbjct: 1364 SISPNTGSIFLAKKLDFET-QSLYKLNITAKDQGRPPRSSTMSVV----IQVRDFNDNPP 1418
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
FP + + + EN P+G+SV + A D D G+L+Y+II G F
Sbjct: 1419 SFPPGDIFKSIVENIPLGTSVISVTAHDPDADINGQLSYAIIQQMPRG--------NHFS 1470
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D + G + T+A D E + + T+
Sbjct: 1471 IDEVKGTIYTSAEIDREFANLFELTV 1496
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
++ L+++VED G+P L + +T+QD NDN P F + Y V E+ +GSSV
Sbjct: 215 QYQLLVEVEDKGEPKRRGYL----QVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVL 270
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A D D+G + Y + D F++D TGL+T D+EAR +Y
Sbjct: 271 QVAAADADEGTNADIRYRL-----------QDEGTPFQMDPETGLITVREPLDFEARRQY 319
Query: 202 AFTLLST 208
+ T+ +T
Sbjct: 320 SLTVQAT 326
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D +G +++ LDY+ S+ LLI V+ G P L+S L I + DENDN P
Sbjct: 1259 AIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIP-----LNSTCTLSIDILDENDNTP 1313
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
FP + V EN IG V + ATD D G L+Y+I + G F
Sbjct: 1314 SFPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHG---------TFS 1364
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+ TG + D+E +S Y +
Sbjct: 1365 ISPNTGSIFLAKKLDFETQSLYKLNI 1390
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
+S L +D TG +S+ L D + L+ + +D G PPL S ++ H I
Sbjct: 3025 VSDGNHLGKFKLDNDTGWISIASSLVSDL-NQNFLIRVTAKDKGNPPLSS--QAVVH--I 3079
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
T+ +EN + P+F + E+ IGS V T A D D G ++Y+IIS G
Sbjct: 3080 TVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGNEEG-- 3137
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVW 212
+F +++ TG+VT DYE S++ T+ +T W
Sbjct: 3138 -------IFAINSSTGVVTLAKALDYEMSSKHEMTISATDGGW 3173
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
GVL + LD ++ S + L+++V D +PP S +S + I L D NDN P F ++
Sbjct: 1998 GVLKTLKALDRES-QSFYNLVIQVHDLPQPPT-SRFTSTAQVSIILLDVNDNPPMF-LSP 2054
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
L ++ EN PI + VF A+ATD D G + Y++++ S F + + G
Sbjct: 2055 KLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNP----------SGNKFSIGTIDG 2104
Query: 186 LVTTNAVFDYEARSRYAFTLLST 208
V D E S Y+ T+++T
Sbjct: 2105 EVHLTGELDREEVSNYSLTVVAT 2127
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
+TGV ++ + LDY+T ++L ++ EDGG S+ + D NDN P F +
Sbjct: 1894 VTGVFNLTRALDYET-QQYYILTVRAEDGGG------QSTTIRAYFNILDVNDNPPVFSM 1946
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDAL 183
+ Y + EN P+GS+V TD D G +L+YSI S DS F VD
Sbjct: 1947 SSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASG---------DSLGQFAVDK- 1996
Query: 184 TGLVTTNAVFDYEARSRYAFTL 205
G++ T D E++S Y +
Sbjct: 1997 HGVLKTLKALDRESQSFYNLVI 2018
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
S + L + D G+PPL SS T + + + D NDN P F Y + EN G+ +
Sbjct: 2118 SNYSLTVVATDKGQPPL----SSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDI 2173
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR 200
A D D+G G++ Y I+ ++ + FR+D++TG +T D E
Sbjct: 2174 IQVSAADNDEGTNGQVRYGIVGG---------NTHQEFRIDSVTGAITVAKSLDRETTPA 2224
Query: 201 YAFTLLST 208
Y T+ +T
Sbjct: 2225 YTLTVQAT 2232
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEF-VGENEPIGSSVFTARATDMDKGDYGKLNY 158
P S L +T+ D ND P F E E V EN P G+ + ATD D GD G + +
Sbjct: 561 PKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGATDRDLGDNGTVRF 620
Query: 159 SIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
S+ A ++ +LFR+D ++G ++T + D E ++ Y ++L+T
Sbjct: 621 SLQEA--------ENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILAT 662
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLL-ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
TGV+ LD + G+ +L+ + +E P + ++ITLQD NDN P FP
Sbjct: 1687 TGVIQTAAILDREQGACLYLVDVYAIEKSSA----FPRTQRAEVEITLQDINDNPPVFP- 1741
Query: 124 TEYLEF-VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDA 182
T+ L+ V EN GS + A D D+G + Y++IS A DDS FR+D
Sbjct: 1742 TDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA-------DDS---FRIDP 1791
Query: 183 LTGLVTTNAVFDYEARSRYAF 203
+G + D E RS+Y+
Sbjct: 1792 ESGDLIATKRLDREHRSKYSL 1812
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
L PL + + ++D NDNAPKF Y V E + V A+D+D+G G +
Sbjct: 1186 LPQPLKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLI 1245
Query: 157 NYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
+YSI+ + + F +D+ +G VT DYEA S Y+ +
Sbjct: 1246 HYSILKG---------NEERQFAIDSFSGQVTLVGKLDYEATSAYSLLI 1285
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 47 TIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITH 106
+I + R I A +GV+S + LD + ++ L ++ DGG L SP +I
Sbjct: 727 SISAGDRSRFQIHA---KSGVISTKMALDREEKTAYQLQVVAT-DGGN--LQSPNQAI-- 778
Query: 107 LKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAAS 166
+ +T+ D DN P F Y V EN +G V + AT MD LN +I +
Sbjct: 779 VTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSATTMD------LNANISYLITT 832
Query: 167 GYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLV 217
G D +F ++ +TG +TT +V D E +S Y ++++ T V
Sbjct: 833 G-----DQRGMFAMNPVTGQLTTASVIDREEQSFYQLKIVASGGAVTGDTV 878
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 51 SQQQRLAIQAVD-PLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDS--PLSSITHL 107
++Q+ +Q P ++ V LD + S +L + ++ G PP SS+ L
Sbjct: 402 NEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASL 461
Query: 108 KITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
I + D ND+ P F Y + E P GS V ATD D G L YSI+S G
Sbjct: 462 VIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLG 521
Query: 168 YTDVDDSWKLFRVDALTGL---VTTNAVFDYEARSR-------YAFTLLSTYSVWTRSLV 217
+ + + L A GL + + V + AR + YA +++ V V
Sbjct: 522 WFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPV 581
Query: 218 WSRP 221
+S+P
Sbjct: 582 FSQP 585
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G L + LD + S++ L+++ +DG + SS + IT+ D ND+ P+
Sbjct: 1789 IDPESGDLIATKRLDREH-RSKYSLLVRADDGLQ-------SSDMRINITISDVNDHTPR 1840
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+ GS V ATD D G G+++Y + + DD +F +
Sbjct: 1841 FSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVV---------EEDDGDGVFFL 1891
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
+ +TG+ DYE + Y T+
Sbjct: 1892 NLVTGVFNLTRALDYETQQYYILTV 1916
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ TG + +PLD + S + L +K D G P + + I I++ DENDNAP+
Sbjct: 2720 INHATGEIRSIRPLDREK-ISHYELTVKSSDKGSPSQSTSVKVI----ISILDENDNAPR 2774
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + +V EN P+G +V +D D G YSI+ D+ F +
Sbjct: 2775 FSQI-FSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIV-----------DTSLPFTI 2822
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRS 215
+ TG + + + E RY + + S WT S
Sbjct: 2823 NPNTGDIVISRPLNREDTDRYRIRVSAHDSGWTVS 2857
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
PLS+ ++ + L+D NDN P F T Y + E + GS V A D D G G++ Y+
Sbjct: 1079 PLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYA 1138
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWS 219
+ + F + A+TG +T+ FD E+ R T + +++V
Sbjct: 1139 F-----------EVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLP 1187
Query: 220 RPMQ 223
+P++
Sbjct: 1188 QPLK 1191
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLI--LKVEDGGKPPLDSPLSSITHLKITLQDENDNA 118
+DP GV++ Q LD++T S HL + V D K S + I L+ N+
Sbjct: 3245 IDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEK-------CSFATVDIQLKGTNEYV 3297
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+F Y V E G++V A+D D G G+++Y I + K F
Sbjct: 3298 PRFVSKLYYFEVSEAASRGTAVGEVFASDRDMGADGEVHYLIFG---------NSRKKGF 3348
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLS 207
+++ +TG + + + D E R + +L+
Sbjct: 3349 QINKMTGQIYVSGLLDREKEERVSLKVLA 3377
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A++P+TG L+ +D + S L I V GG ++ T + IT++D NDNAP
Sbjct: 840 AMNPVTGQLTTASVIDREEQSFYQLKI--VASGGA------VTGDTVVNITVKDLNDNAP 891
Query: 120 KF-PITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
F E + V EN G S+F A+A D D+G G++ YS+ + LF
Sbjct: 892 HFLQAVESINAV-ENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQ----------NPKNLF 940
Query: 179 RVDALTGLVTTNAVFDYEARS 199
++ G ++ D A S
Sbjct: 941 TINEQNGNISLLGALDVHAGS 961
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ G +S+ LD GS + ++ D G P L SS L + + D NDN P
Sbjct: 942 INEQNGNISLLGALDVHAGSYQVEIV--ASDMGVPQL----SSSILLTVYVHDVNDNPPV 995
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+EP+ S F +A+D D G G++ Y+I + D++ +F
Sbjct: 996 FDQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDG------NNGDAFGIFP- 1048
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
G + + D E + RY ++++
Sbjct: 1049 ---DGQLYIKSELDRELQDRYVLLVVAS 1073
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEH-LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
+G L V Q LD + + +H +L++ D G P L + + I + D NDN P F
Sbjct: 2313 SGELRVTQSLDRE--ARDHFVLVVTAADAGSPAL----TGTGTINIIVDDINDNVPTFAN 2366
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDAL 183
YL + E+ G+ V A+D D ++YSII + F ++
Sbjct: 2367 NMYLTSIAEDARTGTDVLLVNASDADAAANAVISYSIIGGNSQ-----------FTINPS 2415
Query: 184 TGLVTTNAVFDYEARSRYAFTLLST 208
TG + T+A+ D E + Y ++++
Sbjct: 2416 TGQIITSALLDRETKDNYTLVVVAS 2440
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG + + +PL+ + + + + + D G + T + I + D NDN P+
Sbjct: 2822 INPNTGDIVISRPLNRED-TDRYRIRVSAHDSG-------WTVSTDVTIFVTDINDNTPR 2873
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y E +GS V ATD D+G G++ Y I S + + FR+
Sbjct: 2874 FSRPSYYLDCPELPELGSRVTQVSATDPDEGSNGQVFYFIKSQS-----------EYFRI 2922
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
+A TG + V Y+ S ++ ++ +S
Sbjct: 2923 NATTGEIFNKQVLKYQNVSGFSNVNINRHS 2952
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGK-PPLDSPLSSITHLKITLQDENDNAP 119
+DPL G + PL +G+SE + V+DGG P DS T + + ++ D P
Sbjct: 2517 IDPLRGAIMAAGPL---SGASEVTFSVHVKDGGSFPKTDS-----TTVTVRFANKAD-FP 2567
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
K E EN+P+G+ V T + + +G+ L+Y I S ++ D+ F+
Sbjct: 2568 KVRAKEQTFMFPENQPVGTLVTTITGSSL-RGE--TLSYYIASG------NLGDT---FQ 2615
Query: 180 VDALTGLVTTNAVFDYEARSRY 201
+D LTG V+ + D+E +Y
Sbjct: 2616 IDPLTGQVSISQPLDFEKIQKY 2637
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+++P TG ++V LD ++ +L +L V D G P S L +TL+D NDN P
Sbjct: 3456 SINPQTGQITVTSGLDRESLPVYNLTVLAV-DSGTPSATGSAS----LVVTLEDINDNGP 3510
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMD-KGDYGKLNYSIISAAAS 166
++E V EN+ G+ V T ++TD D + G NY ++S +
Sbjct: 3511 VLTVSE--GEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPA 3556
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP- 119
+DP TG+++V++PLD++ ++ L ++ D G P L + I L D NDN P
Sbjct: 298 MDPETGLITVREPLDFE-ARRQYSLTVQATDRGVPSLTGRAEAF----IQLLDVNDNDPV 352
Query: 120 ----KFPITEYLEFVGENEPIGSSVFTARATDMD 149
FP T V EN +G+ V TD D
Sbjct: 353 VKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +TG ++V + LD +T + L + + G P DS + ITL D ND P
Sbjct: 2204 IDSVTGAITVAKSLDRETTPAYTLTVQATDRGSSPRTDS-----CTVAITLLDMNDFVPV 2258
Query: 121 FPITEYLEFVGENEPIGS---SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F ++ Y V EN +G+ ++ A D D+G +L+Y ++ + D+++ L
Sbjct: 2259 FELSPYSVNVPEN--LGTLPRAILQVVARDDDQGPNSQLSYVLLGG------NEDNAFVL 2310
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAFTL 205
+G + D EAR + +
Sbjct: 2311 ----TASGELRVTQSLDREARDHFVLVV 2334
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 103 SITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
S T L + LQ + P F T+Y+ + E EPIG++V + A +G + Y I+S
Sbjct: 1613 STTELTVILQGLD--GPVFTQTKYITILKEGEPIGTNVISIEAAS-PRGSEAPVEYYIVS 1669
Query: 163 AAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
T +LF + TG++ T A+ D E
Sbjct: 1670 VRCEEKT----VGRLFTIGRQTGVIQTAAILDRE 1699
Score = 38.9 bits (89), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG + LD +T + L+++ + G LSS T + +T+ D NDN P+
Sbjct: 2412 INPSTGQIITSALLDRETKDNYTLVVVASDAGSP----ESLSSSTSVLVTITDVNDNPPR 2467
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
F Y+ + P GS VF TD D G +L+YS+
Sbjct: 2468 FQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL 2507
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 51 SQQQRLAIQAVDPLTGVLSVQQPLDYDTGS-------SEHLLILKVEDGGKPPLDSPLSS 103
SQ + I A TG + +Q L Y S + H I+ D G P L LS
Sbjct: 2915 SQSEYFRINAT---TGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSL---LSE 2968
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
T + I D NDN P+F +Y V +N +G+ + + T +D D+G LN +
Sbjct: 2969 TT-VTINTVDSNDNPPQFLQNKYFTPVTKNVKVGTKLI--KVTAVDDKDFG-LNSEVEYF 3024
Query: 164 AASGYTDVDDSWKLFRVDALTGLVT 188
+ G + F++D TG ++
Sbjct: 3025 VSDG-----NHLGKFKLDNDTGWIS 3044
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 107 LKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK-GDYGKLNYSIISAAA 165
+ IT+ D ND P F ++ Y + E PIG+ V A D D + + +Y I S
Sbjct: 3393 VNITVLDAND-PPVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNE 3451
Query: 166 SGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
+G F ++ TG +T + D E+ Y T+L+ S
Sbjct: 3452 NG---------AFSINPQTGQITVTSGLDRESLPVYNLTVLAVDS 3487
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 105 THLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYG--KLNYSIIS 162
T +++ ++D NDNAP FP + E+ G V ATD D G G +Y I+S
Sbjct: 119 TEVRVLVRDLNDNAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHHSYRIVS 178
Query: 163 AAASG 167
+G
Sbjct: 179 GNEAG 183
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 96 PLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGK 155
P+++ ++ ++ I + D NDN P F I++ + IGS + T A D D+G G+
Sbjct: 1504 PIETRRYALKNVTILVTDLNDNVPMF-ISQNALAADPSAMIGSVLTTIMAADPDEGANGE 1562
Query: 156 LNYSIISAAASGYT 169
+ Y I++ +T
Sbjct: 1563 VEYEILNGDTDTFT 1576
>sp|Q9Y5E3|PCDB6_HUMAN Protocadherin beta-6 OS=Homo sapiens GN=PCDHB6 PE=2 SV=1
Length = 794
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + +PLD + L ++ + DGG PP S + ++I + D NDN P+F Y
Sbjct: 193 LVLDKPLDREEQPQLRLTLIAL-DGGSPPR----SGTSEIQIQVLDINDNVPEFAQELYE 247
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V EN P+GS V T A D+D G +GK++Y++ VDD + F ++A+TG +
Sbjct: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQ--------VDDVNQPFEINAITGEI 299
Query: 188 TTNAVFDYEARSRY 201
D+E Y
Sbjct: 300 RLRKALDFEEIQSY 313
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
+E+ + + V D G P L + S + + + D NDN P F T Y FV EN +
Sbjct: 413 AEYNITITVTDLGTPRLKTQQS----ITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHI 468
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR 200
+ ATD D G ++ YS++ L ++A G + DYEA
Sbjct: 469 GSVSATDRDSGINAQVTYSLLPPQDPHLP----LSSLVSINADNGHLFALRSLDYEALQS 524
Query: 201 YAFTLLST 208
+ F + +T
Sbjct: 525 FEFRVGAT 532
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ +TG + +++ LD++ S + + + GG LS L + + D NDNAP+
Sbjct: 292 INAITGEIRLRKALDFEEIQSYDVDVEATDGGG-------LSGKCSLVVRVLDVNDNAPE 344
Query: 121 FPITEYLEFVGENEP-IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF- 178
++ ++ + EN P I +VF+ +D D G N +I + ++++
Sbjct: 345 LTMSFFISLIPENLPEITVAVFS--VSDADSGH----NQQVICS-------IENNLPFLL 391
Query: 179 --RVDALTGLVTTNAVFDYEARSRYAFTLLST 208
V+ LVT A+ D E+R+ Y T+ T
Sbjct: 392 RPSVENFYTLVTEGAL-DRESRAEYNITITVT 422
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
L++PL + ++D ND+AP+FP E L + E G A D+D G G
Sbjct: 109 LENPLQ-FFQASLRVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQ 167
Query: 157 NYSIIS 162
Y+I S
Sbjct: 168 RYTISS 173
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG+L++ +PLD++T S+ L ++ +D G PPL++ ++I++ DENDNAPKF
Sbjct: 3129 TGILTLAKPLDFETLSALKLTVV-AKDSGVPPLETE----AQVEISVMDENDNAPKFEKE 3183
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
+Y+ V EN G V T +A D+D +G ++Y + + T D F +++
Sbjct: 3184 KYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSE---TTTDTPVLPFAINS-N 3239
Query: 185 GLVTTNAVFDYEARSRYAFTLLS 207
G V + DYE +Y +++
Sbjct: 3240 GDVLISQSIDYEKIKKYNLKVIA 3262
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
V+P +G + V +PLDY+ + +++V+ + S + + DENDN+P
Sbjct: 1415 VEPSSGNVIVMEPLDYE-AARRIRAVVQVQQAN-------MKSFATFSVNINDENDNSPY 1466
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F FV E++ + + T A D D+G+ G + YSI+S + LF++
Sbjct: 1467 FVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSG---------NEESLFKI 1517
Query: 181 DALTGLVTTNAVFDYE 196
DA +G V D E
Sbjct: 1518 DAKSGEVRLAKPLDPE 1533
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 20/154 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVE------DGGKPPLDSPLSSITHLKITLQDE 114
VD +G ++V D E L +L V+ D G P SS+ +K+ ++D
Sbjct: 660 VDEQSGEITVAS--DLSKLMKEKLEVLDVQLKVSAIDAGTPVK----SSVKTMKLRIKDV 713
Query: 115 NDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDS 174
N+++P+F Y + ENE G +F A D D G+ GK+ +S+ + +
Sbjct: 714 NNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSL--------GNNQEK 765
Query: 175 WKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +DA TG+V D E + + F ++++
Sbjct: 766 SSVISIDAKTGIVKLLKSLDREDQDVHTFAIIAS 799
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
G + + Q +DY+ +L ++ +DGG+PPL S L+I ++DEND+AP F
Sbjct: 3239 NGDVLISQSIDYEKIKKYNLKVI-AKDGGRPPLRSE----ALLEIHVEDENDHAPTFDDC 3293
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
V E E IG + +D+D G N + + G D K F+V+
Sbjct: 3294 NMTALVQEGEAIGHRLLKFSVSDLD----GPKNGAPFTVEIQG-----DGAKSFKVNEKL 3344
Query: 185 GLVTTNAVFDYEARSRYAFTLLS 207
L+T +Y + +Y T+++
Sbjct: 3345 ELLTAKK-LEYRKKDKYLLTVIA 3366
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 51 SQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLS-SITHLKI 109
+ Q++ ++ ++D TG++ + + LD + I+ ++G P+ S+T+L I
Sbjct: 761 NNQEKSSVISIDAKTGIVKLLKSLDREDQDVHTFAIIASDEG------FPMRVSVTNLTI 814
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
+++D NDN PK + + E+ P G+ V A D D G KL + + S
Sbjct: 815 SVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVP--- 871
Query: 170 DVDDSWKLFRVDALTGLVTTNA 191
FR+D +G + +A
Sbjct: 872 --------FRIDHHSGCIFIHA 885
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D + GV++V +PLD + +L ++ D + +T+ D+NDNAP
Sbjct: 3025 IDDINGVVTVVKPLDSEILGFFNLTVVAS--------DGEFEDKATILVTVIDQNDNAPT 3076
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + Y V E+E IG + RA+ D+ + + Y Y D +
Sbjct: 3077 FEKSTYSMKVMESESIGYELAHFRASGGDQNE--TIEY---------YLKPSDVTSFVNL 3125
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
+A TG++T D+E S T+++ S
Sbjct: 3126 NAQTGILTLAKPLDFETLSALKLTVVAKDS 3155
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
SEH L + + DGG+P L S + I + + DENDN+P F T+ + +
Sbjct: 1120 SEHELWVSICDGGEPQLCSNVIVI----VNVLDENDNSPTF--TQAIHHYSVRSKFAGKL 1173
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSR 200
A D D+G+ +L Y+I A F +D ++ + A+ E+
Sbjct: 1174 CRIFAVDADEGENARLTYNITEGDAR-----------FSIDNNGNIIASEAIHGDES--- 1219
Query: 201 YAFTLLST 208
YA T+ +T
Sbjct: 1220 YALTVQAT 1227
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V P G ++V + L++ G + L I K D PP + T +++ + E+ P
Sbjct: 2516 SVHPRQGTITVAKKLEHKAGVTLSLTI-KATDSANPPH----HATTTVEVNIASESVKVP 2570
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F + YL V E+ +G+ + R M+ + ++ ++I+ + DS+ F
Sbjct: 2571 RFSNSHYLFSVMEDADVGNVI--GRVQQMET-EIDEIRFTIVPGSEES-----DSFLPFS 2622
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
V+ TG + + D E ++++ T+
Sbjct: 2623 VERSTGKIIVKSSLDRERKNQWKMTI 2648
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 115 NDNAPKFPITEYLEFVGENEPIGSSVFT-------ARATDMDKGDYGKLNYSIISAAASG 167
N ++P F Y + EN P GSSV + A D D G G + Y ++S
Sbjct: 1664 NQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYRMLSPK--- 1720
Query: 168 YTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203
++F VD +G + T FD+E Y+F
Sbjct: 1721 ------DEQMFSVDQYSGAIRTQMSFDFEKMKEYSF 1750
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V+ TG + V+ LD + + + I GG + +IT + + + D NDNAP
Sbjct: 2622 SVERSTGKIIVKSSLDRERKNQWKMTIRADAAGG-------VHAITTVTVDIGDVNDNAP 2674
Query: 120 KFPITEYLEF-VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
F +Y F + E+ +G+SV A D D G++ +S++ + Y D++++
Sbjct: 2675 AFH-GDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVE--ENPYFDLNEN---- 2727
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLST 208
+G +T + D E Y +T
Sbjct: 2728 -----SGWLTVASQLDREKIDHYKLIARAT 2752
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+VD +G + Q D++ E+ ++ D G+PP S + S+ + +T+ DEND P
Sbjct: 1726 SVDQYSGAIRTQMSFDFEK-MKEYSFYVQAFDMGQPPRRSLMPSL--IVVTVIDENDEPP 1782
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+FP + G SV A DMD G L Y I D F
Sbjct: 1783 RFPSNSLDISMILPTANGVSVGGQTAQDMDS--VGSLRYFI-----------KDQSVPFS 1829
Query: 180 VDALTGLV 187
VD+ TG V
Sbjct: 1830 VDSKTGDV 1837
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 117 NAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK 176
+AP F +Y E+ IG + T +AT D+ D + YS+ SG D++
Sbjct: 2182 HAPVFEKLKYTASTPESTSIGQRLLTIKATTSDEND--TIEYSL-----SGSKDIE---- 2230
Query: 177 LFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYS 210
+ TG VT DYE +Y L++T S
Sbjct: 2231 ---IHPETGDVTITGQLDYEKTQKYDLKLVATSS 2261
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
A+D TG + V + L+Y + + L VED + + + L +++ D ND P
Sbjct: 2415 AIDRKTGRIHVSRVLNYHR-DKRYQIPLVVEDA------TGRRAFSTLTLSVIDINDKPP 2467
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F + Y + E+ G +V ATD D+ D + YS++ + S + F
Sbjct: 2468 FFVLPFYSTSISESAKEGDTVMMVSATDDDEND--TIEYSLLDGSESQF---------FS 2516
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLSTYSV 211
V G +T +++A + T+ +T S
Sbjct: 2517 VHPRQGTITVAKKLEHKAGVTLSLTIKATDSA 2548
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 109 ITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGY 168
I + EN ++P F + V E+ PIG+ V +A D D G G + Y I A S
Sbjct: 596 IIQESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGS-- 653
Query: 169 TDVDDSWKLFRVDALTGLVT 188
S ++ VD +G +T
Sbjct: 654 -----SHEVLTVDEQSGEIT 668
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+ P TG +++ LDY+ L ++ G + +SS + ++D ND P+
Sbjct: 2231 IHPETGDVTITGQLDYEKTQKYDLKLVATSSGKQ------VSSEAEFIVLIEDVNDEMPE 2284
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMD-----KGDYGKLNYSIISAAASGYTDVDDSW 175
F ++ + ++ G + ATDMD + KL Y I VD
Sbjct: 2285 FIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKI----------VDGDE 2334
Query: 176 KLFRVDALTG 185
LF + TG
Sbjct: 2335 TLFNISPATG 2344
>sp|O14917|PCD17_HUMAN Protocadherin-17 OS=Homo sapiens GN=PCDH17 PE=2 SV=2
Length = 1159
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L +Q+ LD + + H L+L DGG+PP S+ + + + D NDN+P F YL
Sbjct: 195 LVIQKALDREQ-QNHHTLVLTALDGGEPPR----SATVQINVKVIDSNDNSPVFEAPSYL 249
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+ V ATD D+G G++ YS S D +LF +D TGL+
Sbjct: 250 VELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVP------DRVRELFSIDPKTGLI 303
Query: 188 TTNAVFDYE 196
DYE
Sbjct: 304 RVKGNLDYE 312
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 72 QPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVG 131
+PLD +T E+ + + DGG PPL+S S I + DENDN P+F Y+ V
Sbjct: 428 RPLDRET-QDEYNVTIVARDGGSPPLNSTKS----FAIKILDENDNPPRFTKGLYVLQVH 482
Query: 132 ENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNA 191
EN G + + A D D G G ++YSI+ S DV + V+ G +
Sbjct: 483 ENNIPGEYLGSVLAQDPDLGQNGTVSYSIL---PSHIGDV-SIYTYVSVNPTNGAIYALR 538
Query: 192 VFDYEARSRYAFTLLSTYS 210
F++E + F +L+ S
Sbjct: 539 SFNFEQTKAFEFKVLAKDS 557
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ--DENDN 117
++DP TG++ V+ LDY+ + + + D G P+ + H K+T++ D NDN
Sbjct: 295 SIDPKTGLIRVKGNLDYEENGMLEIDV-QARDLGPNPIPA------HCKVTVKLIDRNDN 347
Query: 118 APKFPITEYLE-FVGENEPIGSSVFTARATDMDKGDYGKLNYSII 161
AP + + E P G+ + R TD D G G+L ++
Sbjct: 348 APSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVL 392
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V+P G + + +++ + +L +D G P + L S +++T+ D NDNAP
Sbjct: 526 SVNPTNGAIYALRSFNFEQTKAFEFKVL-AKDSGAP---AHLESNATVRVTVLDVNDNAP 581
Query: 120 KFPITEYLEFVGE-----NEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDS 174
+ E N +G V T RA D D G+ G+L Y I+ DD
Sbjct: 582 VIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGN-------DD- 633
Query: 175 WKLFRVDALTGLVTT 189
LF +D +G + T
Sbjct: 634 -HLFEIDPSSGEIRT 647
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNY 158
I +K+ +QD NDNAP F + + EN G+ A D D G+ G Y
Sbjct: 115 ICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTY 169
>sp|Q9Y5G6|PCDG7_HUMAN Protocadherin gamma-A7 OS=Homo sapiens GN=PCDHGA7 PE=2 SV=1
Length = 932
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFT 142
H L+L DGG PP SS H+++T+ D ND+ P F + +Y V EN P+G+ + T
Sbjct: 208 HHLVLTASDGGDPPR----SSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLT 263
Query: 143 ARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A D+D+G G++ YS K+F +++LTG ++T DYE + Y
Sbjct: 264 VHAIDLDEGVNGEVTYSFRKITPK-------LPKMFHLNSLTGEISTLEGLDYEETAFY 315
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
+ LK DGG PPL S TH+ + + D NDN P FP + Y ++ EN P G+S+F
Sbjct: 420 ITLKATDGGTPPL----SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVT 475
Query: 145 ATDMDKGDYGKLNYS-----IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A D D D ++ YS I A S Y ++ TG++ FDYE
Sbjct: 476 AQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSD---------TGVLYALQSFDYE 523
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TGVL Q DY+ E L + D G PPL S +S L + + D+NDN P+ +P
Sbjct: 511 TGVLYALQSFDYEQ-LRELQLRVTAHDSGDPPLSSNMS----LSLFVLDQNDNPPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FAVGLYTGEVRTARALLDRDA 637
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLK--ITLQDENDNA 118
++ LTG +S + LDY+ ++ + + ++ +DG S+T K IT+ D NDNA
Sbjct: 294 LNSLTGEISTLEGLDYEE-TAFYEMEVQAQDGP--------GSLTKAKVLITVLDVNDNA 344
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+ +T + E+ P+G+ + D D G G++ +I +KL
Sbjct: 345 PEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLP---------FKLE 395
Query: 179 R-VDALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +D LVTT D E S Y TL +T
Sbjct: 396 KSIDNYYRLVTTKN-LDRETLSLYNITLKAT 425
>sp|Q9Y5G1|PCDGF_HUMAN Protocadherin gamma-B3 OS=Homo sapiens GN=PCDHGB3 PE=2 SV=3
Length = 929
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L ++ PLD + HL++ V DGG+P S T +++ + D NDN P F Y
Sbjct: 194 LVLKAPLDREEQPHHHLVLTAV-DGGEPSR----SCTTQIRVIVADANDNPPVFTQDMYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V EN P GSSV A DMD+G ++ Y+ I+ + +LF++D+ TG +
Sbjct: 249 VNVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGK-------EVRQLFKLDSKTGEL 301
Query: 188 TTNAVFDYEARSRY 201
TT D+E R Y
Sbjct: 302 TTIGELDFEERDSY 315
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D G PPL SS + + + D NDN P F Y V EN P G+S+
Sbjct: 417 EYNVTITATDKGNPPL----SSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVD--DSWKLFRVDALTGLVTTNAVFDYEARS 199
RA+D D G G ++Y I++ +D++ + V A +G+V FD+E
Sbjct: 473 HVRASDPDLGPNGLVSYYIVA------SDLEPRELSSYVSVSARSGVVFAQRAFDHEQLR 526
Query: 200 RYAFTL 205
+ TL
Sbjct: 527 AFELTL 532
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG L+ LD++ S + + ++ +DGG ++ ++I + DENDNAP+
Sbjct: 294 LDSKTGELTTIGELDFEERDS-YTIGVEAKDGGH------HTAYCKVQIDISDENDNAPE 346
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
+ + + E+ +G++V + D+D G G++
Sbjct: 347 ITLASESQHIQEDAELGTAVALIKTHDLDSGFNGEI 382
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 23/150 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP--KFP 122
+GV+ Q+ D++ + L L+ D G P L + +S L++ + D NDNAP +P
Sbjct: 511 SGVVFAQRAFDHEQLRAFEL-TLQARDQGSPTLSANVS----LRVLVDDRNDNAPLVLYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ + V + G V A D D G L+Y I+ A+ G L
Sbjct: 566 ALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYE-ARSRYAFTL 205
F + TG V T + D E AR R T+
Sbjct: 617 FSLGLRTGEVRTARTLGDREAARQRLLVTV 646
>sp|Q5DRB3|PCDG7_PANTR Protocadherin gamma-A7 OS=Pan troglodytes GN=PCDHGA7 PE=3 SV=1
Length = 932
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFT 142
H L+L DGG PP SS H+++T+ D ND+ P F + +Y V EN P+G+ + T
Sbjct: 208 HHLVLTASDGGDPPR----SSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLT 263
Query: 143 ARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A D+D+G G++ YS ++F +++LTG ++T DYE + Y
Sbjct: 264 VHAIDLDEGVNGEVTYSFRKITPK-------LPQMFHLNSLTGEISTLEGLDYEETAFY 315
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTAR 144
+ LK DGG PPL S TH+ + + D NDN P FP + Y ++ EN P G+S+F
Sbjct: 420 ITLKATDGGTPPL----SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVT 475
Query: 145 ATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A D D D ++ YS+ G +++ TG++ FDYE
Sbjct: 476 AQDHDSEDNAQITYSLAEDTIQGAP----VSSYVSINSDTGVLYALQSFDYE 523
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TGVL Q DY+ E L + D G PPL S +S L + + D+NDN P+ +P
Sbjct: 511 TGVLYALQSFDYEQ-LRELQLRVTAHDSGDPPLSSNMS----LSLFVLDQNDNPPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FAVGLYTGEVRTARALLDRDA 637
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLK--ITLQDENDNA 118
++ LTG +S + LDY+ ++ + + ++ +DG S+T K IT+ D NDNA
Sbjct: 294 LNSLTGEISTLEGLDYEE-TAFYEMEVQAQDGP--------GSLTKAKVLITVLDVNDNA 344
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+ +T + E+ P+G+ + D D G G++ +I +KL
Sbjct: 345 PEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLP---------FKLE 395
Query: 179 R-VDALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +D LVTT D E S Y TL +T
Sbjct: 396 KSIDNYYRLVTTKN-LDRETLSLYNITLKAT 425
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +GV+ + P+D + S + L ++ D G+ P P SS + ++++D+NDNAP+
Sbjct: 342 IDPRSGVIRTRGPVDREEVES-YKLTVEASDQGRDP--GPRSSTAIVFLSVEDDNDNAPQ 398
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y+ V E+ G+ V A+D DKG ++YSI+S A G F +
Sbjct: 399 FSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQ---------FYL 449
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
DA TG + + DYE Y +
Sbjct: 450 DAQTGALDVVSPLDYETTKEYTLRI 474
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DP+TGV++ + LD +T S+ H+ + +D G P S++ L I + D ND+ P
Sbjct: 233 SLDPITGVVTTAEELDRETKST-HVFRVTAQDHGMPRR----SALATLTILVTDTNDHDP 287
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY E + EN +G V T RATD D + Y ++ A +D F
Sbjct: 288 VFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDA------FE 341
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D +G++ T D E Y T+
Sbjct: 342 IDPRSGVIRTRGPVDREEVESYKLTV 367
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
V+ +G++ + LD + ++++L D G PP +P+ + +T+ D NDN P
Sbjct: 867 VESTSGIVRTLRRLDREN-VAQYVLRAYAVDKGMPPARTPM----EVTVTVLDGNDNPPV 921
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F E+ FV EN PIG +V ATD D+G ++ Y I+ + ++F++
Sbjct: 922 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEG---------NIPEVFQL 972
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G +T DYE R Y + +T
Sbjct: 973 DIFSGELTALVDLDYEDRPEYVLVIQAT 1000
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ--DEND-N 117
+D TG L V PLDY+T + E+ L ++ +DGG+PPL S+++ L +T+Q D ND
Sbjct: 449 LDAQTGALDVVSPLDYET-TKEYTLRIRAQDGGRPPL----SNVSGL-VTVQVLDINDIR 502
Query: 118 APKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
P F T + V E+ P+G V +A D D GD +L YS+ A G+
Sbjct: 503 PPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSL---AGVGHD------FP 553
Query: 178 FRVDALTGLVTTNAVFDYEARSRYAF 203
F ++ TG ++ A D E Y+F
Sbjct: 554 FTINNGTGWISVAAELDREEVDFYSF 579
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++S+ PLDY +++L + DG + + + + D N + P F +
Sbjct: 666 GLVSLALPLDYKL-ERQYVLAVTASDGTR-------QDTAQIVVNVTDANTHRPVFQSSH 717
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y E+ P G++V ATD D G+ ++ Y + +DS FR+D TG
Sbjct: 718 YTVNGNEDRPAGTTVVLISATDEDTGENARITYFM-----------EDSIPQFRIDGDTG 766
Query: 186 LVTTNAVFDYEARSRYAFTL 205
VTT A DYE + Y +
Sbjct: 767 AVTTQAELDYEDQVSYTLAI 786
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 116 DNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
+ AP+F Y V EN+P G+SV + RA D D+G+ G+L Y++ + S S
Sbjct: 176 NTAPQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDS------RSN 229
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAF 203
F +D +TG+VTT D E +S + F
Sbjct: 230 HFFSLDPITGVVTTAEELDRETKSTHVF 257
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG ++ Q LDY+ S + L + D G P S T+L+I + D NDNAP+
Sbjct: 761 IDGDTGAVTTQAELDYEDQVS-YTLAITARDNGIPQK----SDTTYLEILVNDVNDNAPQ 815
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ P +SV ATD D G G++ Y+ + DD F V
Sbjct: 816 FLRDSYQGTVYEDVPPFTSVLQILATDRDSGLNGRVFYT--------FQGGDDGDGDFIV 867
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSV 211
++ +G+V T D E ++Y +L Y+V
Sbjct: 868 ESTSGIVRTLRRLDRENVAQY---VLRAYAV 895
Score = 38.1 bits (87), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG +SV LD + + ++ D G P L + S + +T+ D NDN P F
Sbjct: 560 TGWISVAAELDREE-VDFYSFGVEARDHGTPALTASAS----VSVTILDVNDNNPTFTQP 614
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
EY + E+ +G+SV T A +D+ + + Y I S ++ F + + +
Sbjct: 615 EYTVRLNEDAAVGTSVVTVSA--VDRHAHSVITYQITSG---------NTRNRFSITSQS 663
Query: 185 --GLVTTNAVFDYEARSRYAFTLLST 208
GLV+ DY+ +Y + ++
Sbjct: 664 GGGLVSLALPLDYKLERQYVLAVTAS 689
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 17/145 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ--DENDNA 118
+D TG L V PLDY+T + E+ L ++ +DGG+PPL S+++ L +T+Q D NDNA
Sbjct: 449 LDAQTGALDVVSPLDYET-TKEYTLRVRAQDGGRPPL----SNVSGL-VTVQVLDINDNA 502
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P F T + V E+ P+G V +A D D GD +L Y + A G+ F
Sbjct: 503 PIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRL---AGVGHD------FPF 553
Query: 179 RVDALTGLVTTNAVFDYEARSRYAF 203
++ TG ++ A D E Y+F
Sbjct: 554 TINNGTGWISVAAELDREEVDFYSF 578
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +GV+ + P+D + S + L ++ D G+ P P S+ + ++++D+NDNAP+
Sbjct: 342 IDPRSGVIRTRGPVDREEVES-YQLTVEASDQGRDP--GPRSTTAAVFLSVEDDNDNAPQ 398
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y+ V E+ G+ V A+D DKG ++YSI+S A G F +
Sbjct: 399 FSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQ---------FYL 449
Query: 181 DALTGLVTTNAVFDYEARSRYAF 203
DA TG + + DYE Y
Sbjct: 450 DAQTGALDVVSPLDYETTKEYTL 472
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DP+TG ++ + LD +T S+ H+ + +D G P S++ L I + D ND+ P
Sbjct: 233 SLDPVTGAVTTAEELDRETKST-HVFRVTAQDHGMPRR----SALATLTILVTDTNDHDP 287
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY E + EN +G V T RATD D + Y ++ + ++V F
Sbjct: 288 VFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV------FE 341
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTL 205
+D +G++ T D E Y T+
Sbjct: 342 IDPRSGVIRTRGPVDREEVESYQLTV 367
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
V+ +G++ + LD + ++++L D G PP +P+ + +T+ D NDN P
Sbjct: 866 VESTSGIVRTLRRLDREN-VAQYVLRAYAVDKGMPPARTPM----EVTVTVLDVNDNPPV 920
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F E+ FV EN PIG +V ATD D+G ++ Y I+ ++F++
Sbjct: 921 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIP---------EVFQL 971
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G +T DYE R Y + +T
Sbjct: 972 DIFSGELTALVDLDYEDRPEYVLVIQAT 999
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G++S+ PLDY +++L + DG + + + + D N + P F +
Sbjct: 665 GLVSLALPLDYKL-ERQYVLAVTASDGTR-------QDTAQIVVNVTDANTHRPVFQSSH 716
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y V E+ P G++V ATD D G+ ++ Y + +DS FR+DA TG
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFM-----------EDSIPQFRIDADTG 765
Query: 186 LVTTNAVFDYEARSRYAFTL 205
VTT A DYE + Y +
Sbjct: 766 AVTTQAELDYEDQVSYTLAI 785
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 116 DNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
+ AP+F Y V EN+P G+ V + RA D D+G+ G+L Y++ + S S
Sbjct: 176 NTAPQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDS------RSN 229
Query: 176 KLFRVDALTGLVTTNAVFDYEARSRYAF 203
+ F +D +TG VTT D E +S + F
Sbjct: 230 QFFSLDPVTGAVTTAEELDRETKSTHVF 257
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG ++ Q LDY+ S + L + D G P S T+L+I + D NDNAP+
Sbjct: 760 IDADTGAVTTQAELDYEDQVS-YTLAITARDNGIPQK----SDTTYLEILVNDVNDNAPQ 814
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ P +SV ATD D G G++ Y+ + DD F V
Sbjct: 815 FLRDSYQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYT--------FQGGDDGDGDFIV 866
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSV 211
++ +G+V T D E ++Y +L Y+V
Sbjct: 867 ESTSGIVRTLRRLDRENVAQY---VLRAYAV 894
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 87 LKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARAT 146
++ D G P L + S + +T+ D NDN P F EY + E+ +G+SV T A
Sbjct: 580 VEARDHGTPALTASAS----VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV 635
Query: 147 DMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT--GLVTTNAVFDYEARSRYAFT 204
D D + + Y I S ++ F + + + GLV+ DY+ +Y
Sbjct: 636 DRDA--HSVITYQITSG---------NTRNRFSITSQSGGGLVSLALPLDYKLERQYVLA 684
Query: 205 LLST 208
+ ++
Sbjct: 685 VTAS 688
>sp|Q9Y5F8|PCDGJ_HUMAN Protocadherin gamma-B7 OS=Homo sapiens GN=PCDHGB7 PE=2 SV=1
Length = 929
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L +Q+ LD +T S+ HL +L DGG PP S ++I + D NDN P F Y
Sbjct: 194 LVLQKTLDRETQSAHHL-VLTALDGGDPPR----SGTAQIRILVIDANDNPPVFSQDVYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ E+ P G+S+ +ATD D+G ++ YS A D + +F +D TG +
Sbjct: 249 VSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVA-------DKAQHVFSLDYTTGNI 301
Query: 188 TTNAVFDYEARSRYAFTL 205
T D+E RY +
Sbjct: 302 LTQQPLDFEEVERYTINI 319
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL S S L IT D NDNAP F + YL V EN G+S+
Sbjct: 417 EYNVTIAATDRGKPPLSS--SKTITLHIT--DVNDNAPVFGQSAYLVHVPENNQPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A+D D G G+++YS+I++ T V A +G+V FD+E +
Sbjct: 473 QVSASDPDFGLNGRVSYSLIASDLESRT----LSSYVSVSAQSGVVFAQRAFDHEQLRTF 528
Query: 202 AFTL 205
TL
Sbjct: 529 ELTL 532
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG + QQPLD++ + + ++ +D G LS+ + + + DENDN+P
Sbjct: 293 SLDYTTGNILTQQPLDFEE-VERYTINIEAKDRGS------LSTRCKVIVEVVDENDNSP 345
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
+ IT + + E+ P G V + D D G+ G++ S+
Sbjct: 346 EIIITSLSDQIMEDSPPGVVVALFKTRDQDSGENGEVRCSL 386
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V +GV+ Q+ D++ + L L+ D G P L + +S L++ + D NDNAP
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRTFEL-TLQARDQGSPALSANVS----LRVLVGDRNDNAP 560
Query: 120 K--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
+ +P + + V G V A D D G L+Y ++ A+ G
Sbjct: 561 RVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEPG 615
>sp|Q5DRA5|PCDGJ_PANTR Protocadherin gamma-B7 OS=Pan troglodytes GN=PCDHGB7 PE=3 SV=1
Length = 929
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L +Q+ LD +T S+ HL +L DGG PP S ++I + D NDN P F Y
Sbjct: 194 LVLQKTLDRETQSAHHL-VLTALDGGDPPR----SGTAQIRILVIDANDNPPVFSQDVYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ E+ P G+S+ +ATD D+G ++ YS A D + +F +D TG +
Sbjct: 249 VSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVA-------DKAQHVFSLDYTTGNI 301
Query: 188 TTNAVFDYEARSRYAFTL 205
T D+E RY +
Sbjct: 302 LTQQPLDFEEVERYTMNI 319
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL S S L IT D NDNAP F + YL V EN G+S+
Sbjct: 417 EYNVTIAATDRGKPPLSS--SKTITLHIT--DVNDNAPVFGQSAYLVHVPENNQPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A+D D G G+++YS+I++ T V A +G+V FD+E +
Sbjct: 473 QVSASDPDFGPNGRVSYSLIASDLESRT----LSSYVSVSAQSGVVFAQRAFDHEQLRTF 528
Query: 202 AFTL 205
TL
Sbjct: 529 ELTL 532
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 104/253 (41%), Gaps = 35/253 (13%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG + QQPLD++ + + ++ +D G LS+ + + + DENDN+P
Sbjct: 293 SLDYTTGNILTQQPLDFEE-VERYTMNIEAKDRGS------LSTRCKVIVEVVDENDNSP 345
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA-SGYTDVDDSWKLF 178
+ IT + + E+ P G V + D D G+ G++ S+ ++ ++ +KL
Sbjct: 346 EIIITSLSDQIMEDSPPGVVVALFKTRDRDSGENGEVRCSLSRGVPFKIHSSSNNYYKLV 405
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSV---------------WTRSLVW----S 219
+AL T A R L S+ ++ + LV +
Sbjct: 406 TDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENN 465
Query: 220 RPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEF------HPQF 273
+P + D+ R +++L+++D RT V V +S F H Q
Sbjct: 466 QPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQL 525
Query: 274 TERTFKFILSGTD 286
RTF+ L D
Sbjct: 526 --RTFELTLQARD 536
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+V +GV+ Q+ D++ + L L+ D G P L + +S L++ + D NDNAP
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRTFEL-TLQARDQGSPALSANVS----LRVLVGDRNDNAP 560
Query: 120 K--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167
+ +P + + V G V A D D G L+Y ++ A+ G
Sbjct: 561 RVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEPG 615
>sp|Q9BZA8|PC11Y_HUMAN Protocadherin-11 Y-linked OS=Homo sapiens GN=PCDH11Y PE=1 SV=1
Length = 1340
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 233 LIVQKELDREEKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 287
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 288 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 341
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 342 TIKEPLDREETPNHKLLVLAS 362
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 546 SLDRRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 600
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 601 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 649
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 650 IDSQTGVIRPNISFDREKQESYTF 673
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 456 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 510
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + ATD D G ++NY + D+ F +D TG++T
Sbjct: 511 NSPGIQLMKVSATDADSGPNAEINYLLGP----------DAPPEFSLDRRTGMLTVVKKL 560
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 561 DREKEDKYLFTILA 574
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 312 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 357
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P P+ + + + EN P+
Sbjct: 358 LVL-ASDGGLMPARA------MVLVNVTDVNDNVPSIDIRYIVNPVNDTV-VLSENIPLN 409
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ A DYE+
Sbjct: 410 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLENAAYLDYES 460
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 461 TKEYAIKLLA 470
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 650 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 704
Query: 121 FPITEY---LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F + Y E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 705 FIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGG---------NTRDL 755
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 756 FAIDQETGNIT 766
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 154 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS 213
>sp|Q9BZA7|PC11X_HUMAN Protocadherin-11 X-linked OS=Homo sapiens GN=PCDH11X PE=2 SV=1
Length = 1347
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 201 LIVQKELDREEKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 256 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 309
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 310 TIKEPLDREETPNHKLLVLAS 330
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 514 SLDCRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 568
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 617
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 618 IDSQTGVIRPNISFDREKQESYTF 641
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 424 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 478
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + A D D G K+NY + D+ F +D TG++T
Sbjct: 479 NSPGIQLTKVSAMDADSGPNAKINYLLGP----------DAPPEFSLDCRTGMLTVVKKL 528
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 529 DREKEDKYLFTILA 542
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 280 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 325
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P P+ + + + EN P+
Sbjct: 326 LVL-ASDGGLMPARA------MVLVNVTDVNDNVPSIDIRYIVNPVNDTV-VLSENIPLN 377
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ T A DYE+
Sbjct: 378 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLETAAYLDYES 428
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 429 TKEYAIKLLA 438
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 672
Query: 121 F---PITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F P E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 673 FIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGG---------NTRDL 723
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 724 FAIDQETGNIT 734
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS 181
>sp|Q6X862|PC11X_GORGO Protocadherin-11 X-linked OS=Gorilla gorilla gorilla GN=PCDH11X
PE=3 SV=1
Length = 1347
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 201 LIVQKELDREKKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 256 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 309
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 310 TIKEPLDREETPNHKLLVLAS 330
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 514 SLDRRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 568
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 617
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 618 IDSQTGVIRPNISFDREKQESYTF 641
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 424 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 478
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + ATD D G ++NY + D+ F +D TG++T
Sbjct: 479 NSPGIQLTKVSATDADSGPNAEINYLLGP----------DAPPEFSLDRRTGMLTVVKKL 528
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 529 DREKEDKYLFTILA 542
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 280 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 325
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P P+ + + + EN P+
Sbjct: 326 LVL-ASDGGLMP------ARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTV-VLSENIPLN 377
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ T A DYE+
Sbjct: 378 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLETAAYLDYES 428
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 429 TKEYAIKLLA 438
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 672
Query: 121 F--PITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F P + Y E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 673 FIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGG---------NTRDL 723
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 724 FAIDQETGNIT 734
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS 181
>sp|Q71M42|PC11X_PANTR Protocadherin-11 X-linked OS=Pan troglodytes GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 201 LIVQKELDREEKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 256 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 309
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 310 TIKEPLDREETPNHKLLVLAS 330
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 514 SLDRRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 568
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 617
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 618 IDSQTGVIRPNISFDREKQESYTF 641
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 424 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 478
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + ATD D G ++NY + D+ F +D TG++T
Sbjct: 479 NSPGIQLTKVSATDADSGPNAEINYLLGP----------DAPPEFSLDRRTGMLTVVKKL 528
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 529 DREKEDKYLFTILA 542
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 280 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 325
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P P+ + + + EN P+
Sbjct: 326 LVL-ASDGGLMPARA------MVLVNVTDVNDNVPSIDIRYIVNPVNDTV-VLSENIPLN 377
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ T A DYE+
Sbjct: 378 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLETAAYLDYES 428
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 429 TKEYAIKLLA 438
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 672
Query: 121 F--PITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F P + Y E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 673 FIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGG---------NTRDL 723
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 724 FAIDQETGNIT 734
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKS 181
>sp|Q6WYY1|PC11X_PANPA Protocadherin-11 X-linked OS=Pan paniscus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 201 LIVQKELDREEKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 256 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 309
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 310 TIKEPLDREETPNHKLLVLAS 330
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 514 SLDRRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 568
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 617
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 618 IDSQTGVIRPNISFDREKQESYTF 641
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 424 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 478
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + ATD D G ++NY + D+ F +D TG++T
Sbjct: 479 NSPGIQLTKVSATDADSGPNAEINYLLGP----------DAPPEFSLDRRTGMLTVVKKL 528
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 529 DREKEDKYLFTILA 542
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 280 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 325
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P P+ + + + EN P+
Sbjct: 326 LVL-ASDGGLMP------ARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTV-VLSENIPLN 377
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ T A DYE+
Sbjct: 378 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLETAAYLDYES 428
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 429 TKEYAIKLLA 438
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 672
Query: 121 F--PITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F P + Y E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 673 FIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGG---------NTRDL 723
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 724 FAIDQETGNIT 734
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKS 181
>sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F TE
Sbjct: 201 LIVQKELDREEKDT-YVMKVKVEDGGFPQR----SSTAILQVSVTDTNDNHPVFKETEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P+G+SV ATD D G+ K+++S + + + + +LF ++A TGL+
Sbjct: 256 VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS------NIARRLFHLNATTGLI 309
Query: 188 TTNAVFDYEARSRYAFTLLST 208
T D E + +L++
Sbjct: 310 TIKEPLDREETPNHKLLVLAS 330
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D TG+L+V + LD + ++L + +D G PPL S ++ + +++ D+NDN+P
Sbjct: 514 SLDRRTGMLTVVKKLDREK-EDKYLFTILAKDNGVPPLTSNVT----VFVSIIDQNDNSP 568
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
F EY +V EN P +V TD D GD + SI+ D F
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-----------DENDDFT 617
Query: 180 VDALTGLVTTNAVFDYEARSRYAF 203
+D+ TG++ N FD E + Y F
Sbjct: 618 IDSQTGVIRPNISFDREKQESYTF 641
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGEN 133
LDY++ + E+ + L D GKPPL+ S++ +K+ +DENDNAP F + + EN
Sbjct: 424 LDYES-TKEYAIKLLAADAGKPPLNQ--SAMLFIKV--KDENDNAPVFTQSFVTVSIPEN 478
Query: 134 EPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
G + ATD D G ++NY + D+ F +D TG++T
Sbjct: 479 NSPGIQLTKVSATDADSGPNAEINYLLGP----------DAPPEFSLDRRTGMLTVVKKL 528
Query: 194 DYEARSRYAFTLLS 207
D E +Y FT+L+
Sbjct: 529 DREKEDKYLFTILA 542
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 25 ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84
EN +++ + S + RR + ++ TG++++++PLD + + L
Sbjct: 280 ENAKIHFSFSNLVSNIARR--------------LFHLNATTGLITIKEPLDREETPNHKL 325
Query: 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF-------PITEYLEFVGENEPIG 137
L+L DGG P + + + + D NDN P PI + + + EN P+
Sbjct: 326 LVL-ASDGGLMP------ARAMVLVNVTDVNDNVPSIDIRYIVNPINDTV-VLSENIPLN 377
Query: 138 SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEA 197
+ + TD D G++ + +TD + ++L V + L+ T A DYE+
Sbjct: 378 TKIALITVTDKDADHNGRV---------TCFTDHEIPFRLRPVFSNQFLLETAAYLDYES 428
Query: 198 RSRYAFTLLS 207
YA LL+
Sbjct: 429 TKEYAIKLLA 438
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV+ D + S + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDSQTGVIRPNISFDREKQES-YTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPV 672
Query: 121 F--PITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
F P + Y E V + G+ VF A D D G ++ YSI+ ++ L
Sbjct: 673 FIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGG---------NTRDL 723
Query: 178 FRVDALTGLVT 188
F +D TG +T
Sbjct: 724 FAIDQETGNIT 734
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S A D D G G NY +I +
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKS 181
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ L + DGGKPPL S + H+ D NDNAP F T Y+ V EN P G+S+
Sbjct: 417 EYNLTITATDGGKPPLSSSIIVTLHIS----DVNDNAPVFQQTSYMVHVAENNPPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A+D D G G+++YSI+++ + V A +G+V FD+E +
Sbjct: 473 QISASDPDLGPNGQVSYSIVASDLKPR----EILSYVSVSAQSGVVFAQRAFDHEQLRAF 528
Query: 202 AFTL 205
TL
Sbjct: 529 ELTL 532
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L +Q LD + S H L+L DGG PP S T +++ + D NDN P F Y
Sbjct: 194 LILQHSLDREE-HSLHQLVLTAVDGGDPPQ----SGTTQIRVKVTDANDNPPVFSQDVYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK-LFRVDALTGL 186
+ E+ P G V ATD D+G ++ YS + +VD+ K F ++ TG
Sbjct: 249 VTLREDVPPGFFVLQVTATDRDEGVNAEITYS--------FHNVDEQVKHFFNLNEKTGE 300
Query: 187 VTTNAVFDYEARSRYAFTL 205
+TT D+E S Y ++
Sbjct: 301 ITTKDDLDFEIASSYTLSI 319
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG ++ + LD++ SS + L ++ +D G L++ +++ + D+ND AP+ +T
Sbjct: 298 TGEITTKDDLDFEIASS-YTLSIEAKDPGD------LAAHCSIQVEILDDNDCAPEVIVT 350
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA 164
+ E+ P G+ + + D D G+ G++ ++ A
Sbjct: 351 SVFTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGNA 390
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L ++ L+ +V +GV+ Q+ D++ + L L+ D G P L + +S L++
Sbjct: 496 LKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFEL-TLQARDQGSPALSANVS----LRV 550
Query: 110 TLQDENDNAPK--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+ D NDNAP+ +P + + V G V A D D G L+Y ++
Sbjct: 551 LVGDLNDNAPRVLYPALGSDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 610
Query: 163 AAASGYTDVDDSWKLFRVDALTGLV-TTNAVFDYEA 197
A+ G LF + TG V T A+ D +A
Sbjct: 611 ASEPG---------LFSLGLRTGEVRTARALGDRDA 637
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 54 QRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQD 113
L ++D LTGV+S+Q L++ T S +L + V DG ++ LKI+L
Sbjct: 2508 NELQTYSIDKLTGVISLQNMLNF-TDKSSTVLNISVSDGVH-------TAYARLKISLLP 2559
Query: 114 ENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDD 173
EN +P F + Y V EN G ++ T +A+D D G Y L Y I+S ++
Sbjct: 2560 ENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIVS---------EE 2610
Query: 174 SWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
K+F +D TG++T+ FD E + Y L
Sbjct: 2611 MKKIFLIDQTTGVITSKVTFDREKKDEYVVLL 2642
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG++ + + LD +T S +L + K ED G P L SI + + + D NDN P+F +
Sbjct: 3238 TGIIRLHKSLDRETISLFNLTV-KAEDCGVPKL----HSIATVAVNILDINDNPPEFSMR 3292
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
+Y + EN G+ V AT +D G ++Y I+S G F++D+ T
Sbjct: 3293 QYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGK---------FKMDSTT 3343
Query: 185 GLVTTNAVFDYEARSRYAFTL 205
G + NA DYE Y T+
Sbjct: 3344 GDLVLNATLDYEMSKFYFLTI 3364
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
V+ TG L + +PLD + + L + +DGG P L SS + + + D NDNAP
Sbjct: 922 VNATTGCLRLNKPLDREK-QDNYALHITAKDGGSPVL----SSEALVYVLVDDVNDNAPV 976
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + EY+ V E+ P G+ + A D D G ++ +S+ +LFR+
Sbjct: 977 FGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQ--------DEELFRI 1028
Query: 181 DALTGLVTTNAVFDYEAR 198
D TG + T DYE +
Sbjct: 1029 DKHTGAIRTQGYLDYENK 1046
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 56 LAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEN 115
LA+ +D ++G + V Q LD++ +++H+LI+ V+D G P + + + + D N
Sbjct: 1549 LALFRIDSISGNVIVTQRLDFEK-TAQHILIVFVKDQGAPGK----RNYAKIIVNVHDHN 1603
Query: 116 DNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSW 175
D+ P+F V E+ IGS + RA D D G ++ YSII+ ++D +
Sbjct: 1604 DHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEIDPT- 1662
Query: 176 KLFRVDALTGLVTTNAVFDY 195
F + L G + N + +Y
Sbjct: 1663 --FGIITLAGNLNINKIQEY 1680
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G+L + LD + SS L + ++ + S S +KI++QD NDN P
Sbjct: 447 INPDSGMLYTAKQLDAEKKSSYTLTVSAIDQAN---VGSRKQSSAKVKISVQDMNDNDPI 503
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F + + EN GS V A D D G+ ++YSI + A F +
Sbjct: 504 FENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIANLNAVP----------FEI 553
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRP 221
D +G+V T ++ D+E R Y + R+ W P
Sbjct: 554 DHFSGIVKTTSLLDFETMKR-------NYELIIRASDWGLP 587
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG L + LDY+ S + L ++ DGG PPL S+ ++ I++ D NDN+P
Sbjct: 3339 MDSTTGDLVLNATLDYEM-SKFYFLTIQAIDGGTPPL----SNNAYVNISILDINDNSPT 3393
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ +GS + +ATD D G + Y+I + D+ F +
Sbjct: 3394 FLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI---------ERGDNIGQFSI 3444
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
D G ++ + D E S Y +
Sbjct: 3445 DPKNGTISVSRPLDRETISHYTLEI 3469
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG + Q LDY+ H LI+ DGG P L S +S + + I +EN AP+
Sbjct: 1028 IDKHTGAIRTQGYLDYENKQV-HNLIVSAIDGGDPSLTSDMSIV--IMIIDVNENRFAPE 1084
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYG-KLNYSIISAAASGYTDVDDSWKLFR 179
F Y V EN+P G+ V A DMD D K+ YSI G V+D
Sbjct: 1085 FDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQ----- 1139
Query: 180 VDALTGLVTTNAVFDYEARSRYAFTLLS 207
G +T+ + D E ++ Y TL +
Sbjct: 1140 -----GSITSLSQLDAETKNFYWLTLCA 1162
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G L +QQ LD + S +L++ V + P+ + + I ++DENDN PKF T
Sbjct: 2825 SGELILQQTLDREQQESHNLIV--VAETSTVPV---FFAYADVLIDVRDENDNYPKFDNT 2879
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
Y V EN S+ ATD D G G + Y + S D ++ +F +D +
Sbjct: 2880 FYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLES-------DTENIQNIFDIDIYS 2932
Query: 185 GLVTTNAVFDYEARSRYAFTLLS 207
G +T D E +S Y F +++
Sbjct: 2933 GWITLLTSLDREVQSEYNFKVIA 2955
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 61 VDPLTGVL-SVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+D TGV+ + ++ LD + +EH+L + + D G P L SS + + +++ D NDN+P
Sbjct: 1240 IDSKTGVIKTTERKLDRE-NQAEHILEVAISDNGSPVL----SSTSRIVVSVLDINDNSP 1294
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
+F Y V + + S+F A D D G+ G++ YSI S FR
Sbjct: 1295 EFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNK---------FR 1345
Query: 180 VDALTGLV 187
+D+ G +
Sbjct: 1346 IDSQRGHI 1353
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 23/150 (15%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP G++++ L+ + E++L +K D G PPL S + H+ +T+ END PK
Sbjct: 1659 IDPTFGIITLAGNLNINK-IQEYMLQVKAVDLGNPPLSSQIP--VHIIVTMS-END-PPK 1713
Query: 121 FPITEYLEFVGENEPIGSSV--FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
FP + EN PIG+ V TAR++ + ++IIS ++++S F
Sbjct: 1714 FPTNNIAIEIFENLPIGTFVTQVTARSS-------SSIFFNIISG------NINES---F 1757
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLST 208
R++ TG++ N DYE+ + T+ T
Sbjct: 1758 RINPSTGVIVINGNIDYESIKVFNLTVKGT 1787
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TGV+ + +DY++ +L + + SS ++ I + D NDN P
Sbjct: 1759 INPSTGVIVINGNIDYESIKVFNLTVKGTNMAAE-------SSCQNIIIHILDANDNIPY 1811
Query: 121 FPITEYLEFVGENEPIGSSV----------FTARATDMDKGDYGKLNYSIISAAASGYTD 170
F EY+ + E+ IGS V T + D D G G + Y I+ A +
Sbjct: 1812 FVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVGVNGMVEYHIVDDLAKNF-- 1869
Query: 171 VDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
F++D+ TG + DYE + Y F +
Sbjct: 1870 -------FKIDSTTGAIELLRQLDYETNAGYTFDV 1897
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G++ LD++T + LI++ D G P + L I ++D NDN P+
Sbjct: 553 IDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLP---YRRQTEIKLSIVVKDINDNRPQ 609
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGD 152
F V ++ P+G+ VF A D D GD
Sbjct: 610 FERVNCYGKVTKSAPMGTEVFVTSAIDFDAGD 641
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G+L V LD +T + ++ L+ V+DG D + + IT+ D NDN P F +
Sbjct: 3134 SGILKVASALDRET-TPKYKLVAHVQDGK----DFTQECFSEIIITVNDINDNMPIFSMA 3188
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
+Y V E+ + + + A D D G ++ YS++ ++ F++ T
Sbjct: 3189 QYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMG----------ENHDYFKISKST 3238
Query: 185 GLVTTNAVFDYEARSRYAFTL 205
G++ + D E S + T+
Sbjct: 3239 GIIRLHKSLDRETISLFNLTV 3259
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++DP G +SV +PLD +T S + L ++ D G P + + + I + D NDNAP
Sbjct: 3443 SIDPKNGTISVSRPLDRET-ISHYTLEIQACDQGDPQRCNSVP----ININILDTNDNAP 3497
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDK 150
F + Y + EN +G T + +D D+
Sbjct: 3498 IFSSSNYSVVLQENRLLGYVFLTFKISDADE 3528
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP G L + LD + +E++L + V D G P S+ L IT+ D NDN P
Sbjct: 819 IDPDRGELQIIGYLDRER-QNEYVLNITVYDLGNPTK----STSKMLPITILDVNDNRPV 873
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
T + E+ IG+ V ATD D G ++ Y+ +S S +T V
Sbjct: 874 IQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTYA-LSVECSDFT----------V 922
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
+A TG + N D E + YA +
Sbjct: 923 NATTGCLRLNKPLDREKQDNYALHI 947
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 25/179 (13%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDS---------- 99
++ Q + +D G L ++ PLDY+ H+++ V+D G P L S
Sbjct: 2380 INGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVV-NVKDHGSPSLSSRSNVFITGRI 2438
Query: 100 -----PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYG 154
I I ++D NDNAP F Y V G V +A D D D
Sbjct: 2439 LCRFISYKLIYDSIIPVKDLNDNAPCFVEPSYFTKVSVAAVRGQFVALPKAYDKDISDTD 2498
Query: 155 KLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWT 213
L Y I+ + + + +D LTG+++ + ++ +S + + V T
Sbjct: 2499 SLEYKIVYG---------NELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHT 2548
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
G + + + LDY+T S +L I V DG ++ T+L + + D NDN P+F
Sbjct: 1455 NGNILLSKYLDYETQQSYNLTI-SVTDG-------TFTAFTNLLVQVIDINDNPPQFAKD 1506
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALT 184
Y + EN S + ATD D+ KL Y + + T S LFR+D+++
Sbjct: 1507 VYHVNISENIEEESVIMQLHATDRDED--KKLFYHLHA------TQDPSSLALFRIDSIS 1558
Query: 185 GLVTTNAVFDYEARSRYAFTLL 206
G V D+E +++ +
Sbjct: 1559 GNVIVTQRLDFEKTAQHILIVF 1580
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 24 RENIQVYL---VWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGS 80
+E++++Y V + S L R TI S+ Q I D TG + V LDY+ S
Sbjct: 2248 KEDVEMYSALSVSIEAESPLGRSLIYTIS-SESQSFEI---DYNTGSIFVVNELDYEKIS 2303
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
S H + ++ D L + + L +++ D ND P+ Y + EN G+ +
Sbjct: 2304 S-HDVSIRATDS----LSGVYAEVV-LSVSIMDVNDCYPEIESDIYNLTIPENASFGTQI 2357
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
ATD D G KL+Y I S ++ +LF +D G + DYE
Sbjct: 2358 LKINATDNDSGANAKLSYYIESINGQ------NNSELFYIDVTDGNLYLKTPLDYE 2407
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 103 SITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
++T + I++ D NDN P F Y V ++P G+ + +A D+D + G++ Y +
Sbjct: 2119 AVTSIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLDSAENGEVRYELKK 2178
Query: 163 AAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPM 222
+ +LF++D +G ++ E +R ++ Y P+
Sbjct: 2179 G----------NGELFKLDRKSGELSIKQ--HVEGHNRNYELTVAAYDGAITPCSSEAPL 2226
Query: 223 QCLIMRRGV 231
Q ++ R +
Sbjct: 2227 QVKVIDRSM 2235
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
PLS+ + I +++ENDN P Y V E + T +A D D + Y+
Sbjct: 1169 PLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYN 1228
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLV-TTNAVFDYEARSRY 201
I+S GY F +D+ TG++ TT D E ++ +
Sbjct: 1229 IVSGNLVGY---------FEIDSKTGVIKTTERKLDRENQAEH 1262
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 106 HLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA 165
++ I + D ND +P F T+Y + E+ P S+ A D D G G++ YS++
Sbjct: 165 NIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDADLGINGEIYYSLL---- 220
Query: 166 SGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLS 207
+D + F + TG +T Y S + T+++
Sbjct: 221 -----MDSEY--FAIHPTTGEITLLQQLQYAENSHFELTVVA 255
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGV++ + D + E++++LKV DGG LK+ + D NDN P
Sbjct: 2617 IDQTTGVITSKVTFDREK-KDEYVVLLKVSDGGGK------FGFASLKVIVVDVNDNVPY 2669
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA 164
F + EY V ++ T +A D D D G +++ I+ +
Sbjct: 2670 FLLKEYKMVVSTTVEANQTILTVKAKDDDIVDNGSVHFQIVQKS 2713
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ L + DGGKPPL S + H+ D NDNAP F T Y+ V EN P G+S+
Sbjct: 417 EYNLTITATDGGKPPLSSSIIVTLHIS----DVNDNAPVFQQTSYMVHVAENNPPGASIA 472
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
A+D D G G+++YSI+++ + V A +G+V FD+E +
Sbjct: 473 QISASDPDLGPSGQVSYSIVASDLKPR----EILSYVSVSAQSGVVFAQRAFDHEQLRAF 528
Query: 202 AFTL 205
TL
Sbjct: 529 ELTL 532
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSV 140
S H L+L DGG PP S T ++I + D NDN P F Y + E+ P G V
Sbjct: 206 SLHQLVLTAVDGGDPPQ----SGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFV 261
Query: 141 FTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK-LFRVDALTGLVTTNAVFDYEARS 199
ATD D+G ++ YS + +VD+ K F ++ TG +TT D+E S
Sbjct: 262 LQVTATDRDEGINAEITYS--------FHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313
Query: 200 RYAFTL 205
Y ++
Sbjct: 314 SYTLSI 319
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG ++ + LD++ SS + L ++ +D G L++ +++ + D+ND AP+ +T
Sbjct: 298 TGEITTKDDLDFEIASS-YTLSIEAKDPGD------LAAHCSIQVEILDDNDCAPEVIVT 350
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA 164
+ E+ P G+ + + D D G+ G++ ++ A
Sbjct: 351 SVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGNA 390
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L ++ L+ +V +GV+ Q+ D++ + L L+ D G P L + +S L++
Sbjct: 496 LKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFEL-TLQARDQGSPALSANVS----LRV 550
Query: 110 TLQDENDNAPK--FPI-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIIS 162
+ D NDNAP+ +P + + V G V A D D G L+Y ++
Sbjct: 551 LVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 610
Query: 163 AAASGYTDVDDSWKLFRVDALTGLV-TTNAVFDYEA 197
A+ G LF + TG V T A+ D +A
Sbjct: 611 ASEPG---------LFSLGLRTGEVRTARALGDRDA 637
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 57 AIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEND 116
I ++P +GV++ Q+ LDY+ SS L+I G ++S + I + DEND
Sbjct: 1712 GIFTINPYSGVITTQKALDYERTSSYQLIIQATNMAG-------MASNATVNIQIVDEND 1764
Query: 117 NAPKFPITEYLEFVGENEPIGS-------SVFTARATDMDKGDYGKLNYSIISAAASGYT 169
NAP F ++Y + E PI S S RATD D L Y I+ + A
Sbjct: 1765 NAPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRATDADSNRNALLVYQIVESTAK--- 1821
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203
K F VD+ TG + T A D+E + + F
Sbjct: 1822 ------KFFTVDSSTGAIRTIANLDHETIAHFHF 1849
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P TG +SV + LDY+ L+++ +DGG P L S++ + I L D NDN PK
Sbjct: 3286 INPKTGGISVSEVLDYEL-CKRFYLVVEAKDGGTPAL----SAVATVNINLTDVNDNPPK 3340
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+ +G SV A D+D G++++SI++ D F V
Sbjct: 3341 FSQDVYSAVISEDALVGDSVILLIAEDVDSQPNGQIHFSIVNG---------DRDNEFTV 3391
Query: 181 DALTGLVTTNAVFDYEARSRYAF 203
D + GLV D E S Y+
Sbjct: 3392 DPVLGLVKVKKKLDRERVSGYSL 3414
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 106 HLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA 165
+ I+++D ND+ P+F Y +V E+ P+G+SV T A+D DKG+ G + YSI S
Sbjct: 457 QVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKDKGENGYITYSIASL-- 514
Query: 166 SGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRP 221
+ F ++ TG+++T D+E+ Y R+ W P
Sbjct: 515 --------NLLPFVINQFTGVISTTEELDFESSPE-------IYRFIVRASDWGSP 555
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 52 QQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDS-PLSSITHLKIT 110
+ + I ++ TG + + + LD +T + H + PLD + + I
Sbjct: 2749 ENNKGGIFVIEQETGTIKLDKRLDRETSPAFHFKV-----AATIPLDKVDIVFTVDVDIK 2803
Query: 111 LQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTD 170
+ D NDN P F + Y + E P+G+ + RA DMD G G++ YS+ S +
Sbjct: 2804 VLDLNDNKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMDWGANGQVTYSLHSDSQP---- 2859
Query: 171 VDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLST-----YSVWTRSLVWSR 220
+ + F +D+ TG ++T D+E + F+++++ +S+ + +LV R
Sbjct: 2860 -EKVMEAFNIDSNTGWISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVR 2913
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
VDP+ G++ V++ LD + S LL+ V D G P + SS + I + D NDN+P
Sbjct: 3391 VDPVLGLVKVKKKLDRERVSGYSLLVQAV-DSGIPAM----SSTATVNIDISDVNDNSPV 3445
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYG-KLNYSIISA 163
F Y + EN+P+G+S+ TD D G ++SI+S
Sbjct: 3446 FTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSG 3489
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 70 VQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEF 129
++QPLD + SS ++ + + + P S LSS+T + IT+ D NDN P F +YL
Sbjct: 3189 LEQPLDREQQSSYNISVRATD---QSPGQS-LSSLTTVTITVLDINDNPPVFERRDYLVT 3244
Query: 130 VGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTT 189
V E+ G+ V AT D G ++ Y I S G F+++ TG ++
Sbjct: 3245 VPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGK---------FKINPKTGGISV 3295
Query: 190 NAVFDYEARSRY 201
+ V DYE R+
Sbjct: 3296 SEVLDYELCKRF 3307
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P+ G++++ + D T + +L +KV D G PP+ + ++I + +T+ D ++ PK
Sbjct: 1616 IEPVLGIITICKEPDM-TTMGQFVLSIKVTDQGSPPMSA--TAIVRISVTMSD--NSHPK 1670
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F +Y V EN IG+SV A L Y + +G +F +
Sbjct: 1671 FIHKDYQAEVNENVDIGTSVILISAISQ-----STLIYEVKDGDING---------IFTI 1716
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
+ +G++TT DYE S Y + +T
Sbjct: 1717 NPYSGVITTQKALDYERTSSYQLIIQAT 1744
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG L V P+D + + +LL + + D G P SS L I ++D NDN+P
Sbjct: 776 IDMETGQLKVLMPMDREH-TDLYLLNITIYDLGNPQK----SSWRLLTINVEDANDNSPV 830
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E+ IG+ + A D D G G++ YS+++ + F +
Sbjct: 831 FIQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVLT-----------DTQQFAI 879
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
++ TG+V D E+++ Y+ +
Sbjct: 880 NSSTGIVYVADQLDRESKANYSLKI 904
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP TGVL + LD++ +H+L + V D P ++ + + ++D ND++P
Sbjct: 1511 IDPSTGVLYTAERLDHE-AQDKHILNIMVRDQEFPYR----RNLARVIVNVEDANDHSPY 1565
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ +GS+V A D DKG+ +L Y+I + ++ +F++
Sbjct: 1566 FTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTI---------EAGNTGNMFKI 1616
Query: 181 DALTGLVT 188
+ + G++T
Sbjct: 1617 EPVLGIIT 1624
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 15/115 (13%)
Query: 81 SEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENE--PIGS 138
+EH L + V DGG SP S + + + DENDN P+FP Y + E + G
Sbjct: 1218 AEHFLEVTVTDGGP----SPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGE 1273
Query: 139 SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193
++ A A D D+G +++YSI+ D +D K F +D TG+V++ F
Sbjct: 1274 PIYRAFAFDRDEGPNAEISYSIV--------DGNDDGKFF-IDPKTGMVSSRKQF 1319
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 50 LSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKI 109
L+ Q+ AI + TG++ V LD ++ ++ L K+E K L S+ LK+
Sbjct: 871 LTDTQQFAINSS---TGIVYVADQLDRESKANYSL---KIEARDKAESGQQLFSVVTLKV 924
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
L D ND +P F + Y V E+ P+G+ + D D G G++ YS+
Sbjct: 925 FLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSL--------- 975
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
V+D F +D +G + + DYE + Y T+
Sbjct: 976 -VNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTV 1010
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TGVL V PLDY+ +S + L ++ D L + +T + + + D NDN P
Sbjct: 2233 IDFDTGVLKVVSPLDYEV-TSAYKLTIRASDA----LTGARAEVT-VDLLVNDVNDNPPI 2286
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y + E IG+ V + D D + ++Y I+ D +S F +
Sbjct: 2287 FDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQ-------DTYNSTDYFHI 2339
Query: 181 DALTGLVTTNAVFDYE 196
D+ +GL+ T + D+E
Sbjct: 2340 DSSSGLILTARMLDHE 2355
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 60 AVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
++D +GV++ LD +T S L + + G PL S + I ++D NDNAP
Sbjct: 1092 SIDDESGVITAADILDRETMGSYWLTVYATDRGV-----VPLYSTIEVYIEVEDVNDNAP 1146
Query: 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFR 179
Y V EN P SV +A D D KL Y I S + F
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNF---------FA 1197
Query: 180 VDALTGLVTTNA 191
++ TGL+TT +
Sbjct: 1198 INIKTGLITTTS 1209
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 66 GVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE 125
G + + +PLD + S ++ + +V DG ++T + I + D NDN P+F
Sbjct: 1413 GTIVIAKPLDAEQRSIYNMSV-EVTDGTN-------VAVTQVFIKVLDNNDNGPEFSQPN 1464
Query: 126 YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTG 185
Y + E+ + + ATD D+ KL+Y++ S+ S S + FR+D TG
Sbjct: 1465 YDVTISEDVLPDTEILQIEATDRDEKH--KLSYTVHSSIDS------ISMRKFRIDPSTG 1516
Query: 186 LVTTNAVFDYEARSRYAFTLL 206
++ T D+EA+ ++ ++
Sbjct: 1517 VLYTAERLDHEAQDKHILNIM 1537
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G + + + LDY+ +L + + +D G+P + S +++ +EN + P
Sbjct: 985 IDKASGAIRLSKELDYEKQQFYNLTV-RAKDKGRP-VSLSSVSFVEVEVVDVNENLHTPY 1042
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
FP + V EN IG+SV A D D G G++ YSI + G F +
Sbjct: 1043 FPDFAVVGSVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGR---------FSI 1093
Query: 181 DALTGLVTTNAVFDYEARSRYAFTLLST 208
D +G++T + D E Y T+ +T
Sbjct: 1094 DDESGVITAADILDRETMGSYWLTVYAT 1121
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D +G++ + LD++ L + + D G P L S + + H+ I+ D NDN P
Sbjct: 2339 IDSSSGLILTARMLDHELVQHCTLKVRSI-DSGFPSLSSEV--LVHIYIS--DVNDNPPV 2393
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y +V E P G V +A+D D D+ +L YSI+S + F +
Sbjct: 2394 FNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSILSG---------NDRTSFLM 2444
Query: 181 DALTGLVT 188
D+ +G++T
Sbjct: 2445 DSKSGVIT 2452
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 101 LSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
L + T + I + D ND P F T Y + E+ P+ +SV ATD D G G+ Y
Sbjct: 138 LEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYYYF 197
Query: 161 ISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLS 207
+ LF V +G+++ + +Y+ ++RY +L+
Sbjct: 198 -----------KNKVDLFSVHPTSGVISLSGRLNYDEKNRYDLEILA 233
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 67/176 (38%), Gaps = 48/176 (27%)
Query: 98 DSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLN 157
D +S + I + N +P F + Y+ V EN G+ V RATD D G YG+++
Sbjct: 2473 DGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENVAAGTKVIHVRATDGDPGTYGQIS 2532
Query: 158 YSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLV 217
Y+II+ D + F +D+ G V T D E L S++ R+L
Sbjct: 2533 YAIIN---------DFAKDRFLIDS-NGQVITTERLDREN------PLEGDVSIFVRAL- 2575
Query: 218 WSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQF 273
D GGRT VRV + ++ PQF
Sbjct: 2576 -------------------------------DGGGRTTFCTVRVIVVDENDNAPQF 2600
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 53 QQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ 112
+ ++ + +V P +GV+S+ L+YD + L IL V+ G K ++ +SS L + ++
Sbjct: 198 KNKVDLFSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMKLYGNNGVSSTAKLYVHIE 257
Query: 113 DENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAA 164
N++AP + ++ F E EP + V D+D G G++ I A
Sbjct: 258 RINEHAPTIHVVTHVPFSLEKEPTYAVV---TVDDLDDGANGEIESVSIVAG 306
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + PL+ D + + ++ GG+ ++ +++ + DENDNAP+F EY
Sbjct: 2558 LDRENPLEGDVS----IFVRALDGGGR-------TTFCTVRVIVVDENDNAPQFMTVEYR 2606
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
V + G V +A D D G ++ YS+ S A+ D L +D G +
Sbjct: 2607 ASVRADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVAD------LLEIDPDNGWM 2660
Query: 188 TTNAVFDYEARSRYAF 203
T F+ + +F
Sbjct: 2661 VTKGNFNQLKNTVLSF 2676
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++ TGV+S + LD+++ + I++ D G P S ++ I + + NDN+P
Sbjct: 521 INQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYRH---ESEVNVTIRIGNVNDNSPL 577
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGY 168
F + + P+G + A D+D+ + K Y IIS G+
Sbjct: 578 FEKVACQGVISYDFPVGGHITAVSAIDIDELELVK--YKIISGNELGF 623
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
++P +G + +++ + D + E+ + + +DGGKP L S+ L IT+ N P
Sbjct: 2132 INPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSL----STSVELPITIV--NKAMPV 2185
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F Y V E+ + + + + AT + D +K F +
Sbjct: 2186 FDKPFYTASVNEDIRMNTPILSINATSPE------------GQGIIYIIIDGDPFKQFNI 2233
Query: 181 DALTGLVTTNAVFDYEARSRYAFTL 205
D TG++ + DYE S Y T+
Sbjct: 2234 DFDTGVLKVVSPLDYEVTSAYKLTI 2258
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 93/274 (33%), Gaps = 59/274 (21%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG +S + LD++T + ++ + G LSS + + + D NDNAP
Sbjct: 2868 IDSNTGWISTLKDLDHETDPTFTFSVVASDLGEA----FSLSSTALVSVRVTDINDNAPV 2923
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGK-LNYSIISAAASGYTD---VDDSWK 176
F Y V E++P G V D D D + ++Y I G V WK
Sbjct: 2924 FAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWK 2983
Query: 177 LF---------------RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRP 221
++ + A GL T A+ + + + +T L P
Sbjct: 2984 VYVKRPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIP 3043
Query: 222 MQCLIMRRG------------------------------------VVFDYEARSRYAFTL 245
+I++ + D E Y+
Sbjct: 3044 SNKIILKVSAKDADIGSNGYIRYSLYGSGNSEFFLDPESGELKTLALLDRERIPVYSLMA 3103
Query: 246 LSTDSGGRTCKVKVRVEIESRDEFHPQFTERTFK 279
+TD GGR C+ + + +E ++ P F+ +
Sbjct: 3104 KATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYN 3137
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Query: 110 TLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYT 169
++D NDN+P F Y V + G+ ++ A D DKG G++ Y +
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKDKGPNGEVTYVL--------- 2123
Query: 170 DVDDSWKLFRVDALTGLVTTNAVFDYE-ARSRYAFTLLS 207
D + F ++ +G V F+ + + Y T+L+
Sbjct: 2124 --QDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTILA 2160
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+DP +G L LD + + L+ K DGG S ++ + L+D NDN P
Sbjct: 3078 LDPESGELKTLALLDRER-IPVYSLMAKATDGGGRFCQS------NIHLILEDVNDNPPV 3130
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA 165
F Y V EN + + +A D D G K+ YS+ +A
Sbjct: 3131 FSSDHYNTCVYENTATKALLTRVQAVDPDIGINRKVVYSLADSAG 3175
>sp|Q5DRB4|PCDG6_PANTR Protocadherin gamma-A6 OS=Pan troglodytes GN=PCDHGA6 PE=3 SV=1
Length = 932
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 79 GSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGS 138
G + + L+L DGG P SSI + +T+ D NDN P F Y V EN P+G+
Sbjct: 204 GEAVYRLVLTAMDGGDPVR----SSIAQILVTVLDVNDNTPVFTQPVYRVSVPENLPVGT 259
Query: 139 SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR 198
V ATD D+G +G++ YS + + ++F ++ LTG ++T+A DYE
Sbjct: 260 PVLAVTATDQDEGVHGEVTYSFVKI-------TEKISQIFCLNVLTGEISTSANLDYEDS 312
Query: 199 SRY 201
S Y
Sbjct: 313 SFY 315
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 91 DGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK 150
D G PPL S+ T + + + D NDN P FP + Y +V EN P G+S+F+ A D D
Sbjct: 426 DKGTPPL----STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDV 481
Query: 151 GDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
+++YS+ G +++ TG++ FDYE
Sbjct: 482 DQNAQVSYSLAEDTLQGAP----LSSYVSINSDTGILYALRSFDYE 523
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TG+L + DY+ L + + G D PLSS L + + D+NDNAP+ +P
Sbjct: 511 TGILYALRSFDYEQLRDLQLWVTASDSG-----DPPLSSNVSLSLFVLDQNDNAPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FSVGLHTGEVRTARALLDRDA 637
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
LTG +S LDY+ SS + L ++ DG L + IT+ D NDN P+ +
Sbjct: 297 LTGEISTSANLDYED-SSFYELGVEARDGPG------LRDRAKVLITILDVNDNVPEVVV 349
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
T + E+ P G+ + + D D G G + SI
Sbjct: 350 TSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSI 386
>sp|Q9Y5G0|PCDGH_HUMAN Protocadherin gamma-B5 OS=Homo sapiens GN=PCDHGB5 PE=2 SV=1
Length = 923
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL S +S I H++ D NDNAP F YL V EN P G+S+
Sbjct: 413 EYNVTITATDRGKPPLSSSISVILHIR----DVNDNAPVFHQASYLVSVPENNPPGASIA 468
Query: 142 TARATDMDKGDYGKLNYSIISA-----AASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A+D+D G G+++YSI+++ A + Y + A +G+V FDYE
Sbjct: 469 QVCASDLDLGLNGQVSYSIMASDLEPLALASYVS---------MSAQSGVVFAQRAFDYE 519
Query: 197 ARSRYAFTL 205
+ TL
Sbjct: 520 QLRTFELTL 528
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L++++ LD + S H L+L DGG PPL S T L+I + D NDN P F Y
Sbjct: 194 LALEKTLDREQ-QSYHRLVLTALDGGHPPL----SGTTELRIQVTDANDNPPVFNRDVYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P G++V ATD D+G ++ YS + ++F +++ +G +
Sbjct: 249 VSLRENVPPGTTVLQVSATDQDEGINSEITYSFYR-----------TGQIFSLNSKSGEI 297
Query: 188 TTNAVFDYEARSRYAFTL 205
TT D+E Y+ +
Sbjct: 298 TTQKKLDFEETKEYSMVV 315
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G ++ Q+ LD++ + E+ ++++ DGG L + ++I +QDENDN+P+
Sbjct: 294 SGEITTQKKLDFEE-TKEYSMVVEGRDGGG------LVAQCTVEINIQDENDNSPEVTFH 346
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLN--------YSIISAAASGYTDVDD 173
LE + EN G+ + + D D G+ G++N + IIS++ + Y V D
Sbjct: 347 SLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTD 403
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
+GV+ Q+ DY+ + L L+ D G P L + +S L++ + D NDNAP+ +P
Sbjct: 507 SGVVFAQRAFDYEQLRTFEL-TLQARDQGSPALSANVS----LRVLVGDRNDNAPRVLYP 561
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ + V G V A D D G L+Y ++ A+ G L
Sbjct: 562 ALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPG---------L 612
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F + TG V T A+ D +A
Sbjct: 613 FSLGLRTGEVRTARALGDRDA 633
>sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa GN=PCDH11X PE=2 SV=1
Length = 1117
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 17/144 (11%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L VQ+ LD + + +++ +KVEDGG P SS L++++ D NDN P F E
Sbjct: 201 LIVQKELDREEKDT-YVMKIKVEDGGFPQR----SSTAILQVSVADTNDNRPVFKENEIE 255
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNY---SIISAAASGYTDVDDSWKLFRVDALT 184
+ EN P+GSSV ATD D G+ K+++ ++IS A KLF +++ T
Sbjct: 256 VSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAK---------KLFHLNSTT 306
Query: 185 GLVTTNAVFDYEARSRYAFTLLST 208
GL+T D E + +L++
Sbjct: 307 GLITIKEPLDREESPNHKLLVLAS 330
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 74 LDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEF-VGE 132
LDY++ + E+ + L D GKPPL+ SS+ L I ++DENDNAP F +L V E
Sbjct: 424 LDYES-TREYAIKLLAADAGKPPLNQ--SSM--LLIKVKDENDNAPVF-TQPFLSLSVPE 477
Query: 133 NEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAV 192
N G+ + A D D G ++NY + G+ D+ F +D TG++T
Sbjct: 478 NNSPGTQLTKISAMDADSGRNAEINYLL------GF----DAPSEFNLDHRTGILTAVKK 527
Query: 193 FDYEARSRYAFTLLS 207
D E + +Y+FT+L+
Sbjct: 528 LDREKQEKYSFTVLA 542
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+D TG+L+ + LD + +L +D G PPL +++ T L +T+ D+NDN+P
Sbjct: 515 LDHRTGILTAVKKLDREKQEKYSFTVL-AKDNGMPPL---MTNATVL-VTVLDQNDNSPV 569
Query: 121 FPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRV 180
F EY +V EN P +V TD D G+ + SI+ A DD F +
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVILSILDAN-------DD----FTI 618
Query: 181 DALTGLVTTNAVFDYEARSRYAF 203
D TG++ N FD E + Y F
Sbjct: 619 DPQTGVIQPNISFDREKQESYTF 641
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSE-HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119
+DP TGV +Q + +D E + +K EDGG+ SS + I + D NDN P
Sbjct: 618 IDPQTGV--IQPNISFDREKQESYTFYVKAEDGGR----ISRSSTAKVTINVVDVNDNKP 671
Query: 120 KF--PITEY-LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWK 176
F P + Y E V + G+ VFT A D D G +L YS++ G
Sbjct: 672 VFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKG--------- 722
Query: 177 LFRVDALTGLVT 188
LF +D +G +T
Sbjct: 723 LFIIDQTSGNIT 734
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG++++++PLD + + LL+L DGG +P ++ + +T D NDN P I
Sbjct: 306 TGLITIKEPLDREESPNHKLLVL-ASDGGL----TPARAMVLVNVT--DINDNIPSIDIR 358
Query: 125 EYLEFVG------ENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
+ + EN P+ + + TD D G + S +TD + ++L
Sbjct: 359 YIINPINGTVVLSENAPLNTKIALITVTDKDADHNGWV---------SCFTDHEVPFRLR 409
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLS 207
V + L+ T A DYE+ YA LL+
Sbjct: 410 PVFSNQFLLETAAYLDYESTREYAIKLLA 438
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 104 ITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISA 163
+ ++ ++D NDNAP FP T + EN I S D D G G NY +I
Sbjct: 122 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIKG 181
Query: 164 AA 165
+
Sbjct: 182 QS 183
>sp|Q9Y5G7|PCDG6_HUMAN Protocadherin gamma-A6 OS=Homo sapiens GN=PCDHGA6 PE=2 SV=1
Length = 932
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 79 GSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGS 138
G + + L+L DGG P SS+ + +T+ D NDN P F Y V EN P+G+
Sbjct: 204 GEAVYRLVLTAMDGGDPVR----SSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGT 259
Query: 139 SVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR 198
V ATD D+G +G++ YS + + ++F ++ LTG ++T+A DYE
Sbjct: 260 PVLAVTATDQDEGVHGEVTYSFVKI-------TEKISQIFCLNVLTGEISTSANLDYEDS 312
Query: 199 SRY 201
S Y
Sbjct: 313 SFY 315
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 91 DGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK 150
D G PPL S+ T + + + D NDN P FP + Y +V EN P G+S+F+ A D D
Sbjct: 426 DKGTPPL----STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDV 481
Query: 151 GDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
+++YS+ G +++ TG++ FDYE
Sbjct: 482 DQNAQVSYSLAEDTLQGAP----LSSYVSINSDTGILYALRSFDYE 523
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TG+L + DY+ L + + G D PLSS L + + D+NDNAP+ +P
Sbjct: 511 TGILYALRSFDYEQLRDLQLWVTASDSG-----DPPLSSNVSLSLFVLDQNDNAPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FSVGLHTGEVRTARALLDRDA 637
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 64 LTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPI 123
LTG +S LDY+ SS + L ++ DG L + IT+ D NDN P+ +
Sbjct: 297 LTGEISTSANLDYED-SSFYELGVEARDGPG------LRDRAKVLITILDVNDNVPEVVV 349
Query: 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSI 160
T + E+ P G+ + + D D G G + SI
Sbjct: 350 TSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSI 386
>sp|Q5DRA7|PCDGH_PANTR Protocadherin gamma-B5 OS=Pan troglodytes GN=PCDHGB5 PE=3 SV=1
Length = 923
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
E+ + + D GKPPL S +S I H++ D NDNAP F YL V EN P G+S+
Sbjct: 413 EYNVTITATDRGKPPLSSSISVILHIR----DVNDNAPVFHQASYLVSVPENNPPGASIA 468
Query: 142 TARATDMDKGDYGKLNYSIISA-----AASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
A+D+D G G+++YSI+++ A + Y + A +G+V FDYE
Sbjct: 469 QVCASDLDLGLNGQVSYSIMASDLEPLALASYVS---------MSAQSGVVFAQRAFDYE 519
Query: 197 ARSRYAFTL 205
+ TL
Sbjct: 520 QLRTFELTL 528
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L++++ LD + S H L+L DGG PPL S T L+I + D NDN P F Y
Sbjct: 194 LALEKTLDREQ-QSYHRLVLTALDGGNPPL----SGTTELRIQVTDANDNPPVFNRDVYR 248
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLV 187
+ EN P G++V ATD D+G ++ YS + ++F +++ +G +
Sbjct: 249 VSLRENVPPGTTVLQVSATDQDEGINSEITYSFYR-----------TGQIFSLNSKSGEI 297
Query: 188 TTNAVFDYEARSRYAFTL 205
TT D+E Y+ +
Sbjct: 298 TTQKKLDFEETKEYSMVV 315
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
+G ++ Q+ LD++ + E+ ++++ DGG L + ++I +QDENDN+P+
Sbjct: 294 SGEITTQKKLDFEE-TKEYSMVVEGRDGGG------LVAQCTVEINIQDENDNSPEVTFH 346
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKLN--------YSIISAAASGYTDVDD 173
LE + EN G+ + + D D G+ G++N + IIS++ + Y V D
Sbjct: 347 SLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTD 403
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
+GV+ Q+ DY+ + L L+ D G P L + +S L++ + D NDNAP+ +P
Sbjct: 507 SGVVFAQRAFDYEQLRTFEL-TLQARDQGSPALSANVS----LRVLVGDRNDNAPRVLYP 561
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ + V G V A D D G L+Y ++ A+ G L
Sbjct: 562 ALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLHASEPG---------L 612
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F + TG V T A+ D +A
Sbjct: 613 FSLGLRTGEVRTARALGDRDA 633
>sp|Q9Y5G5|PCDG8_HUMAN Protocadherin gamma-A8 OS=Homo sapiens GN=PCDHGA8 PE=2 SV=1
Length = 932
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 41/176 (23%)
Query: 59 QAVDPLTGVLSVQQ---------PLDYDTG-------------------SSEHLLILKVE 90
+AVDP GV S+Q LD TG + H L+L
Sbjct: 156 EAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTAS 215
Query: 91 DGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK 150
DGGKPP SS + +T+ D NDNAP FP Y V EN P G+ + T A+D D+
Sbjct: 216 DGGKPPR----SSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDE 271
Query: 151 GDYGKLNYSIISAAASGYTDVDDSW-KLFRVDALTGLVTTNAVFDYEARSRYAFTL 205
G GK+ Y + +++ LF+++ TG ++ DYE S Y +
Sbjct: 272 GINGKVAYK--------FRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEI 319
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 100 PLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYS 159
PLS+ T + + + D NDN P FP Y ++ EN G+S+F+ A D D + ++ YS
Sbjct: 431 PLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYS 490
Query: 160 IISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYE 196
+ G +++ TG++ FDYE
Sbjct: 491 VTEDTLQGAP----LSSYISINSDTGVLYALQSFDYE 523
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK--FP 122
TGVL Q DY+ LL+ D G PPL S +S L + + D+NDNAP+ +P
Sbjct: 511 TGVLYALQSFDYEQIRDLQLLV-TASDSGDPPLSSNMS----LSLFVLDQNDNAPEILYP 565
Query: 123 I-----TEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKL 177
+ +E + G V A D D G L+Y ++ A+ G L
Sbjct: 566 ALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPG---------L 616
Query: 178 FRVDALTGLV-TTNAVFDYEA 197
F V TG V T A+ D +A
Sbjct: 617 FSVGLHTGEVRTARALLDRDA 637
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124
TG +S+ + LDY+ S + I + ED G L T L I+++D NDN P+ IT
Sbjct: 298 TGEISIAKSLDYEECSFYEMEI-QAEDVGA------LLGRTKLLISVEDVNDNRPEVIIT 350
Query: 125 EYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
V EN G+ + D D G G++
Sbjct: 351 SLFSPVLENSLPGTVIAFLSVHDQDSGKNGQV 382
>sp|Q5DRE9|PCDA3_PANTR Protocadherin alpha-3 OS=Pan troglodytes GN=PCDHA3 PE=3 SV=1
Length = 950
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
+H L++ DGGKP L + T LKIT+ D NDNAP F T Y + EN P G+ V
Sbjct: 207 KHYLLITAIDGGKPEL----TGTTQLKITVLDVNDNAPAFERTIYKVRLLENAPNGTLVV 262
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
T ATD+D+G + YS + ++ D F +D + G ++ D+E Y
Sbjct: 263 TVNATDLDEGVNKDIAYSFNTDMSA------DILSKFHLDPVNGQISVKGNIDFEESKSY 316
Query: 202 AFTLLST 208
+ +T
Sbjct: 317 EIQVEAT 323
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + PLD ++ S+ + L++ DGG P L + + + + D NDNAP F +EY
Sbjct: 407 LVLDSPLDRESVSA-YELVVTARDGGSPSL----WATASVSVEVADVNDNAPAFSQSEYT 461
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSII 161
FV EN P G +FT A D D + ++YS++
Sbjct: 462 VFVKENNPPGCHIFTVSARDADAQENALVSYSLV 495
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
+D PL + H+++ ++D NDNAP FP++ F+ E+ GS A+D D G L
Sbjct: 110 VDRPLQ-VFHVEVEVKDINDNAPVFPMSVKNLFISESRQPGSRFSLEGASDADIGTNSLL 168
Query: 157 NYSIIS 162
YS+ S
Sbjct: 169 TYSLDS 174
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 85/232 (36%), Gaps = 60/232 (25%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ--DENDNA 118
+DP+ G +SV+ +D++ S + + + D G PP+ H + L+ D NDN
Sbjct: 295 LDPVNGQISVKGNIDFEESKSYEIQV-EATDKGNPPMSD------HCTVLLEIVDINDNV 347
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+ I V E+ P+ + + +D D G G++ S+
Sbjct: 348 PELVIHSLSLPVLEDSPLSTVIALISVSDRDSGVNGQVTCSLT----------------- 390
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEAR 238
F L+ST+ + SLV P+ D E+
Sbjct: 391 --------------------PHVPFKLVSTFKNY-YSLVLDSPL-----------DRESV 418
Query: 239 SRYAFTLLSTDSGGRT--CKVKVRVEIESRDEFHPQFTERTFKFILSGTDLP 288
S Y + + D G + V VE+ ++ P F++ + + + P
Sbjct: 419 SAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENNPP 470
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 27/153 (17%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVE----DGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+G + QPLD+ E L +L+ + D G PPL S ++ L++ + DENDNAP
Sbjct: 514 SGKVYALQPLDH-----EELELLQFQVSARDAGVPPLGSNVT----LQVFVLDENDNAPA 564
Query: 121 FPITE-------YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDD 173
+ E V + G V RA D D G L Y +
Sbjct: 565 LLMPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLXYELQPGTGGARIP--- 621
Query: 174 SWKLFRVDALTGLVTTNAVFDYEARSRYAFTLL 206
FRV TG ++T D R+ +L
Sbjct: 622 ----FRVGLYTGEISTTRALDEVDVPRHRLLVL 650
>sp|Q9Y5H8|PCDA3_HUMAN Protocadherin alpha-3 OS=Homo sapiens GN=PCDHA3 PE=2 SV=1
Length = 950
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVF 141
+H L++ DGGKP L + T LKIT+ D NDNAP F T Y + EN P G+ V
Sbjct: 207 KHYLLITAIDGGKPEL----TGTTQLKITVLDVNDNAPAFERTIYKVRLLENAPNGTLVV 262
Query: 142 TARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201
T ATD+D+G + YS + ++ D F +D + G ++ D+E Y
Sbjct: 263 TVNATDLDEGVNKDIAYSFNTDMSA------DILSKFHLDPVNGQISVKGNIDFEESKSY 316
Query: 202 AFTLLST 208
+ +T
Sbjct: 317 EIQVEAT 323
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 68 LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYL 127
L + PLD ++ S+ + L++ DGG P L + + + + D NDNAP F +EY
Sbjct: 407 LVLDSPLDRESVSA-YELVVTARDGGSPSL----WATASVSVEVADVNDNAPAFSQSEYT 461
Query: 128 EFVGENEPIGSSVFTARATDMDKGDYGKLNYSII 161
FV EN P G +FT A D D + ++YS++
Sbjct: 462 VFVKENNPPGCHIFTVSARDADAQENALVSYSLV 495
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 97 LDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKL 156
+D PL + H+++ ++D NDNAP FP+ F+ E+ GS A+D D G L
Sbjct: 110 VDRPLQ-VFHVEVEVKDINDNAPVFPMAVKNLFISESRQPGSRFSLEGASDADIGTNSLL 168
Query: 157 NYSIIS 162
YS+ S
Sbjct: 169 TYSLDS 174
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 85/232 (36%), Gaps = 60/232 (25%)
Query: 61 VDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ--DENDNA 118
+DP+ G +SV+ +D++ S + + + D G PP+ H + L+ D NDN
Sbjct: 295 LDPVNGQISVKGNIDFEESKSYEIQV-EATDKGNPPMSD------HCTVLLEIVDINDNV 347
Query: 119 PKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLF 178
P+ I V E+ P+ + + +D D G G++ S+
Sbjct: 348 PELVIQSLSLPVLEDSPLSTVIALISVSDRDSGVNGQVTCSLT----------------- 390
Query: 179 RVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEAR 238
F L+ST+ + SLV P+ D E+
Sbjct: 391 --------------------PHVPFKLVSTFKNY-YSLVLDSPL-----------DRESV 418
Query: 239 SRYAFTLLSTDSGGRT--CKVKVRVEIESRDEFHPQFTERTFKFILSGTDLP 288
S Y + + D G + V VE+ ++ P F++ + + + P
Sbjct: 419 SAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENNPP 470
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 27/153 (17%)
Query: 65 TGVLSVQQPLDYDTGSSEHLLILKVE----DGGKPPLDSPLSSITHLKITLQDENDNAPK 120
+G + QPLD+ E L +L+ + D G PPL S ++ L++ + DENDNAP
Sbjct: 514 SGKVYALQPLDH-----EELELLQFQVSARDAGVPPLGSNVT----LQVFVLDENDNAPA 564
Query: 121 FPITE-------YLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDD 173
+ E V + G V RA D D G L+Y +
Sbjct: 565 LLMPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIP--- 621
Query: 174 SWKLFRVDALTGLVTTNAVFDYEARSRYAFTLL 206
FRV TG ++T D R+ +L
Sbjct: 622 ----FRVGLYTGEISTTRALDEVDAPRHRLLVL 650
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,585,651
Number of Sequences: 539616
Number of extensions: 4513138
Number of successful extensions: 11733
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 8802
Number of HSP's gapped (non-prelim): 2120
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)