Query psy8640
Match_columns 303
No_of_seqs 200 out of 1806
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:01:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2w_A Cadherin-2; cell adhesi 100.0 3.2E-42 1.1E-46 339.8 29.4 280 7-303 1-367 (559)
2 3q2v_A Cadherin-1; cell adhesi 100.0 1.1E-41 3.8E-46 335.4 32.8 280 7-303 1-361 (550)
3 2a62_A Cadherin-8; extracellul 100.0 1E-42 3.6E-47 321.2 18.3 231 8-303 2-244 (322)
4 1l3w_A EP-cadherin, C-cadherin 100.0 1E-40 3.5E-45 328.2 28.1 281 6-303 6-367 (546)
5 1q55_A EP-cadherin, C-cadherin 100.0 2.7E-40 9.3E-45 340.4 28.1 285 2-303 151-516 (880)
6 3ubh_A Neural-cadherin; cell a 100.0 4.5E-39 1.5E-43 307.0 28.8 230 58-303 48-354 (419)
7 2a4e_A Cadherin-11; dimer, cal 100.0 2.4E-38 8.3E-43 276.1 22.1 201 8-272 3-215 (215)
8 3ubf_A Neural-cadherin; cell a 100.0 5.8E-38 2E-42 288.8 24.5 190 54-302 39-242 (316)
9 3q2v_A Cadherin-1; cell adhesi 100.0 1.7E-37 5.7E-42 305.6 27.9 268 12-303 113-465 (550)
10 3q2w_A Cadherin-2; cell adhesi 100.0 1.6E-37 5.6E-42 306.2 24.4 273 12-303 113-471 (559)
11 2x2u_A Proto-oncogene tyrosine 100.0 3.1E-39 1E-43 287.3 10.9 209 12-274 8-245 (246)
12 1l3w_A EP-cadherin, C-cadherin 100.0 5.5E-38 1.9E-42 308.7 20.7 273 6-303 112-470 (546)
13 2qvi_A Cadherin-2; beta barrel 100.0 6.1E-37 2.1E-41 267.2 22.7 204 8-265 2-215 (215)
14 3qrb_A Cadherin-1; cell adhesi 100.0 5.4E-37 1.8E-41 267.2 22.0 204 8-265 2-213 (213)
15 3mvs_A Cadherin-23, otocadheri 100.0 4.4E-37 1.5E-41 267.2 21.2 191 14-270 17-210 (210)
16 3k5r_A Cadherin 13; mouse, str 100.0 1.2E-35 4E-40 259.6 23.2 204 7-265 2-218 (218)
17 1q55_A EP-cadherin, C-cadherin 100.0 1.7E-36 6E-41 312.1 20.7 267 12-303 268-619 (880)
18 3ppe_A Vascular endothelial ca 100.0 1.3E-34 4.4E-39 250.4 23.6 194 7-265 1-203 (203)
19 3lnd_A CDH6 protein, cadherin 100.0 9.9E-35 3.4E-39 251.8 18.1 195 8-265 2-207 (207)
20 3ubf_A Neural-cadherin; cell a 100.0 1.9E-33 6.4E-38 258.7 21.7 206 5-270 103-316 (316)
21 2a62_A Cadherin-8; extracellul 100.0 3.8E-32 1.3E-36 250.6 14.0 193 12-264 111-322 (322)
22 3ubh_A Neural-cadherin; cell a 100.0 1.8E-29 6.2E-34 240.6 23.9 188 12-265 224-418 (419)
23 4apx_B Protocadherin-15, otoca 100.0 2.5E-29 8.7E-34 222.6 17.7 197 14-265 24-237 (242)
24 2yst_A Protocadherin-7; BH-PCD 100.0 3.9E-29 1.3E-33 198.0 8.7 116 109-271 2-119 (119)
25 2ee0_A Protocadherin-9; Ca dom 99.9 1.8E-27 6.3E-32 187.0 9.0 113 109-267 2-114 (114)
26 3mvs_A Cadherin-23, otocadheri 99.9 1.2E-26 4.1E-31 201.3 13.0 133 116-303 3-138 (210)
27 2a4e_A Cadherin-11; dimer, cal 99.9 1.8E-24 6.3E-29 188.2 16.5 126 125-303 5-136 (215)
28 2qvi_A Cadherin-2; beta barrel 99.9 1.2E-24 4.2E-29 189.3 14.3 129 127-303 6-137 (215)
29 3qrb_A Cadherin-1; cell adhesi 99.9 9.5E-24 3.3E-28 183.4 15.2 128 126-303 5-137 (213)
30 3ppe_A Vascular endothelial ca 99.9 2.3E-23 7.9E-28 179.7 16.1 122 126-302 5-132 (203)
31 3k5r_A Cadherin 13; mouse, str 99.9 1.5E-23 5.2E-28 182.7 13.0 126 127-303 7-137 (218)
32 2x2u_A Proto-oncogene tyrosine 99.9 2.3E-25 7.9E-30 197.8 1.2 132 120-303 2-168 (246)
33 3lnd_A CDH6 protein, cadherin 99.9 2.9E-24 1E-28 185.8 7.8 124 127-303 6-135 (207)
34 2yqg_A Desmoglein-2, HDGC; cad 99.9 6.2E-24 2.1E-28 169.0 7.0 117 114-276 5-123 (123)
35 1ncg_A N-cadherin; cell adhesi 99.8 3.7E-21 1.3E-25 149.9 9.1 101 125-273 6-110 (110)
36 1wyj_A Protocadherin beta 14; 99.8 2.6E-21 9E-26 154.1 2.6 106 124-281 11-123 (125)
37 4apx_B Protocadherin-15, otoca 99.8 6.1E-19 2.1E-23 155.9 12.2 130 125-303 21-161 (242)
38 1ncg_A N-cadherin; cell adhesi 99.8 1E-18 3.6E-23 136.0 8.2 107 6-121 2-110 (110)
39 2yqg_A Desmoglein-2, HDGC; cad 99.8 1.1E-18 3.6E-23 138.7 7.1 115 1-124 5-123 (123)
40 1zxk_A Cadherin-8; strand dime 99.7 9.8E-18 3.4E-22 127.7 10.3 89 126-265 5-98 (98)
41 1zvn_A Mn-cadherin; strand dim 99.7 1.2E-17 3.9E-22 127.6 10.7 89 126-265 6-99 (99)
42 3k6d_A T-cadherin; cell adhesi 99.7 9.2E-17 3.1E-21 122.6 10.5 91 126-265 5-99 (99)
43 3k6f_A T-cadherin; cell adhesi 99.7 3.4E-16 1.2E-20 119.6 11.7 90 127-265 7-100 (100)
44 3k6i_A T-cadherin; cell adhesi 99.7 5E-16 1.7E-20 118.4 12.6 90 127-265 6-99 (99)
45 2omz_B Epithelial-cadherin; le 99.7 2.1E-16 7E-21 121.9 9.3 92 127-266 10-105 (105)
46 2yst_A Protocadherin-7; BH-PCD 99.6 7.2E-16 2.5E-20 121.4 8.2 97 12-119 19-119 (119)
47 2omz_B Epithelial-cadherin; le 99.6 1.8E-15 6.2E-20 116.6 8.9 101 5-114 3-105 (105)
48 1wyj_A Protocadherin beta 14; 99.6 3.8E-16 1.3E-20 124.2 1.8 104 11-129 12-123 (125)
49 3k6i_A T-cadherin; cell adhesi 99.5 4.4E-14 1.5E-18 107.6 11.4 96 8-113 2-99 (99)
50 1wuz_A Pcdha4 protein, CNR-EC1 99.5 1.2E-15 4.2E-20 117.1 2.7 99 124-269 3-103 (103)
51 3k6f_A T-cadherin; cell adhesi 99.5 4.5E-14 1.5E-18 107.7 10.2 97 7-113 2-100 (100)
52 3k6d_A T-cadherin; cell adhesi 99.5 7.6E-14 2.6E-18 106.3 8.8 96 8-113 2-99 (99)
53 1zvn_A Mn-cadherin; strand dim 99.5 7.4E-14 2.5E-18 106.3 8.6 93 7-113 2-99 (99)
54 1zxk_A Cadherin-8; strand dime 99.5 1E-13 3.5E-18 105.4 8.4 93 8-113 2-98 (98)
55 2ee0_A Protocadherin-9; Ca dom 99.4 6.5E-13 2.2E-17 103.7 7.2 100 6-115 12-114 (114)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.1 6.9E-11 2.4E-15 90.4 4.4 93 10-117 3-103 (103)
57 1op4_A Neural-cadherin; beta s 93.4 0.41 1.4E-05 38.6 8.6 65 116-195 31-95 (159)
58 3pdd_A Glycoside hydrolase, fa 92.3 4.1 0.00014 33.5 15.7 57 80-149 61-121 (190)
59 2yrl_A KIAA1837 protein; PKD d 88.8 0.91 3.1E-05 33.6 5.9 31 238-268 68-98 (102)
60 2y72_A Collagenase, collagenas 80.4 3.2 0.00011 29.3 5.3 30 236-265 56-85 (85)
61 2kpn_A Bacillolysin; solution 78.0 4.7 0.00016 29.9 5.7 31 241-271 61-91 (103)
62 3pdd_A Glycoside hydrolase, fa 70.8 19 0.00064 29.4 8.3 57 239-302 61-121 (190)
63 3rb5_A Na/Ca exchange protein; 62.7 62 0.0021 28.4 10.5 48 115-165 6-53 (298)
64 2yhg_A SDE_182CT, cellulose-bi 62.3 75 0.0025 29.6 11.3 23 241-263 412-436 (437)
65 3pe9_A Fibronectin(III)-like m 55.6 56 0.0019 23.6 9.5 27 239-265 61-88 (98)
66 2yrl_A KIAA1837 protein; PKD d 55.6 26 0.00089 25.4 5.7 31 79-116 68-98 (102)
67 3rb5_A Na/Ca exchange protein; 54.1 1.1E+02 0.0039 26.7 11.8 80 76-165 87-166 (298)
68 2kpn_A Bacillolysin; solution 43.1 63 0.0022 23.6 6.1 53 60-119 35-91 (103)
69 2yhg_A SDE_182CT, cellulose-bi 40.8 61 0.0021 30.2 6.9 43 63-111 394-436 (437)
70 2c4x_A Endoglucanase, ctcel9D- 36.9 46 0.0016 28.7 5.2 31 237-267 67-97 (260)
71 1b4r_A Protein (PKD1_human); P 31.8 89 0.003 21.7 5.1 28 236-264 52-79 (80)
72 2y72_A Collagenase, collagenas 26.0 1.4E+02 0.0049 20.3 5.4 30 76-112 55-84 (85)
73 2e7m_A Protein KIAA0319; PKD d 25.0 45 0.0015 25.0 2.6 25 240-265 81-105 (113)
74 3pe9_A Fibronectin(III)-like m 20.8 1.4E+02 0.0048 21.4 4.6 26 83-113 63-88 (98)
No 1
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=3.2e-42 Score=339.80 Aligned_cols=280 Identities=22% Similarity=0.244 Sum_probs=225.6
Q ss_pred eeEecceeEeeccccccccceEEEEEEe--cccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 7 VWLQPMQCLIMRRGVVHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
.|+.| |+.|+||.. ++......++.. +.++++.|+..|.- ....+.++|.|++.||+|++.++||||.... |.
T Consensus 1 ~W~~~-~~~v~En~~-g~~~~~i~~~~~D~~~n~~i~Ysi~~~~--~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~-y~ 75 (559)
T 3q2w_A 1 DWVIP-PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPG--ADQPPTGIFIINPISGQLSVTKPLDRELIAR-FH 75 (559)
T ss_dssp CCCCC-CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESBT--TTBSSTTSEEECTTTCEEEECSCCCTTTCSE-EE
T ss_pred CccCC-cEEeeCCCC-CCCCeEEEEEeeCCCCCcEEEEEEECCC--CCCCCCceEEEeCCceEEEECCccCCCCCce-EE
Confidence 38876 999999997 554444444432 34456667543311 1122357999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCC--CCceEEEEEee
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG--DYGKLNYSIIS 162 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g--~n~~i~Y~i~~ 162 (303)
|.+.|.|+|. +.+++++.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.++|+|..
T Consensus 76 l~v~a~D~g~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~ 151 (559)
T 3q2w_A 76 LRAHAVDING----NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILS 151 (559)
T ss_dssp EEEEEEETTS----CEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEE
T ss_pred EEEEEEECCC----CccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEec
Confidence 9999999987 67889999999999999999999999999999999999999999999999997 59999999988
Q ss_pred CCCCCCcccCCCcCcEEEECCCcEEEEcc-cCcccccceEEEEEEEEEE---------------EeecccccCCCc----
Q psy8640 163 AAASGYTDVDDSWKLFRVDALTGLVTTNA-VFDYEARSRYAFTLLSTYS---------------VWTRSLVWSRPM---- 222 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~F~Id~~tG~I~~~~-~LD~e~~~~~~l~v~a~~~---------------~~~~~~~~~~~~---- 222 (303)
+.+. ....+.|.|++.+|.|++.+ .||||....|.|+|.|.+. +....++.|.|.
T Consensus 152 ~~~~-----~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~ 226 (559)
T 3q2w_A 152 QAPS-----TPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAM 226 (559)
T ss_dssp EESC-----CSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSS
T ss_pred CCCC-----CCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccc
Confidence 6532 12226799999999999987 9999999999999998621 222222222221
Q ss_pred ---------------------------------eEEE----------e-----------ecCceeeeeeecEEEEEEEEE
Q psy8640 223 ---------------------------------QCLI----------M-----------RRGVVFDYEARSRYAFTLLST 248 (303)
Q Consensus 223 ---------------------------------~~~i----------~-----------~~~~~lD~E~~~~y~l~V~a~ 248 (303)
.+.| + ...+.||||....|.|+|.|+
T Consensus 227 ~y~~~V~En~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~ 306 (559)
T 3q2w_A 227 TFYGEVPENRVDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAE 306 (559)
T ss_dssp EEEEEEESSCSSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECC
T ss_pred cceeEecCCCCCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEE
Confidence 1111 1 112569999999999999999
Q ss_pred ECCC--------CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 249 DSGG--------RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 249 D~g~--------~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
|.+. ++++++|+|.|.|+|| +|.|.+..|.+. .|++ |.|+.|++|+|+|+|+
T Consensus 307 D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~--~~g~~v~~v~A~D~D~ 367 (559)
T 3q2w_A 307 NQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGL--HAGTMLTTLTAQDPDR 367 (559)
T ss_dssp BSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCC--CTTCEEEECCEECSCS
T ss_pred cCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCC--CCCCEEEEEEEECCCC
Confidence 9642 4789999999999999 699999999999 9999 5999999999999995
No 2
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.1e-41 Score=335.39 Aligned_cols=280 Identities=19% Similarity=0.272 Sum_probs=226.4
Q ss_pred eeEecceeEeecccc--ccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 7 VWLQPMQCLIMRRGV--VHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
.|+.| |+.|+||.. .+....+..+ ....++++.|+..|+- ..+++.++|.|++.+|.|++.++||||.... |.
T Consensus 1 ~w~~~-~~~v~En~~~~~~~~v~~v~a-d~d~~~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~-y~ 75 (550)
T 3q2v_A 1 DWVIP-PISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQG--ADKPPVGVFIIERETGWLKVTQPLDREAIAK-YI 75 (550)
T ss_dssp CEECC-CEEEETTCCSSSSEEEEECEE-GGGGTSCEEEEEESBT--TTBSSCSSEEECTTTCEEEECSCCCTTTCSE-EE
T ss_pred CCcCC-CEEEeCCCCCCcCeEEEEEec-CCCCCceEEEEEECCC--CCCCCCceEEEeCCceEEEECCccCcccCCe-eE
Confidence 38876 999999996 2333333333 3344567777654321 1234567999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCceEEEEEe
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG---DYGKLNYSII 161 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i~Y~i~ 161 (303)
|.+.|.|.+. +.++..+.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.++|+|.
T Consensus 76 l~v~a~d~~~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~ 151 (550)
T 3q2v_A 76 LYSHAVSSNG----EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIV 151 (550)
T ss_dssp EEEEEEETTS----CBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEE
T ss_pred EEEEEEeCCC----CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEe
Confidence 9999999876 56788899999999999999999999999999999999999999999999998 7999999999
Q ss_pred eCCCCCCcccCCCcCcEEEECCCcEEEE-cccCcccccceEEEEEEEEE------------EEeecccccCCCc------
Q psy8640 162 SAAASGYTDVDDSWKLFRVDALTGLVTT-NAVFDYEARSRYAFTLLSTY------------SVWTRSLVWSRPM------ 222 (303)
Q Consensus 162 ~~~~~~~~~~~~~~~~F~Id~~tG~I~~-~~~LD~e~~~~~~l~v~a~~------------~~~~~~~~~~~~~------ 222 (303)
.+.+. ....+.|.|++.+|.|++ .++||||....|.|+|.|.+ .+.....+.|.|.
T Consensus 152 ~~~~~-----~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y 226 (550)
T 3q2v_A 152 SQDPE-----LPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTY 226 (550)
T ss_dssp EEESC-----CSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEE
T ss_pred cCCCC-----CCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEeccee
Confidence 86532 223378999999999997 58999999999999999972 1222222222111
Q ss_pred -------------------------------eEEEe--------------------ecCceeeeeeecEEEEEEEEEECC
Q psy8640 223 -------------------------------QCLIM--------------------RRGVVFDYEARSRYAFTLLSTDSG 251 (303)
Q Consensus 223 -------------------------------~~~i~--------------------~~~~~lD~E~~~~y~l~V~a~D~g 251 (303)
.+.+. ...+.||||....|.|.|.|+|.+
T Consensus 227 ~~~V~En~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 306 (550)
T 3q2v_A 227 QGQVPENEVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEE 306 (550)
T ss_dssp EEEEESSCSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESS
T ss_pred EEEEecCCCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCC
Confidence 12221 112569999999999999999976
Q ss_pred C-----CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 252 G-----RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 252 ~-----~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
+ ++++++|+|.|+|+|| +|.|.+..|.+. +|++ |.|+.|++|+|+|+|+
T Consensus 307 ~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~--~~gt~v~~v~A~D~D~ 361 (550)
T 3q2v_A 307 PFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDF--GVGQEITSYTAREPDT 361 (550)
T ss_dssp CCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTC--CSSCEEEECCEECCCC
T ss_pred CCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCC--CCCCEEEEEeCCCCCC
Confidence 4 5789999999999999 999999999999 9999 5999999999999995
No 3
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1e-42 Score=321.19 Aligned_cols=231 Identities=24% Similarity=0.345 Sum_probs=198.2
Q ss_pred eEecceeEeecc--ccccccceEEE-EEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 8 WLQPMQCLIMRR--GVVHRENIQVY-LVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 8 ~~~p~~~~i~e~--~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
|+. .++.|+|| ++.+....+.. ....+ ++.+.|.. ...+...+|.|++.+|.|++.++||||.... |.
T Consensus 2 w~~-~~~~v~E~~~~~~~~~v~~va~D~D~g-~~~i~Y~l------~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~ 72 (322)
T 2a62_A 2 WVW-NQMFVLEEFSGPEPILVGRLHTDLDPG-SKKIKYIL------SGDGAGTIFQINDITGDIHAIKRLDREEKAE-YT 72 (322)
T ss_dssp CCC-CCEECCCSCCCSSCEECCCCCCCCCCS-SCCCEEEE------EETTBTTTEEEETTTTEEEECSCCCTTTCSB-CC
T ss_pred cEe-ceeeeccccCCCCCEEEEEEEEcCCCC-CCEEEEEE------ECCCCCCcEEEeCCcCEEEEeccCCcccccE-EE
Confidence 776 57889999 55444333221 01112 35566643 2233457999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCceEEEEEe
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK---GDYGKLNYSII 161 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~---g~n~~i~Y~i~ 161 (303)
|.|.|+|++. .+++++.+++.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|.
T Consensus 73 l~v~a~D~~~---~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~ 149 (322)
T 2a62_A 73 LTAQAVDFET---NKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSIL 149 (322)
T ss_dssp EEEEEECTTT---CSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEE
T ss_pred EEEEEEECCC---CCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEc
Confidence 9999999864 14578889999999999999999999999999999999999999999999996 78999999999
Q ss_pred eCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecE
Q psy8640 162 SAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240 (303)
Q Consensus 162 ~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~ 240 (303)
.+. +.|.|++.+|.|++. +.||||....
T Consensus 150 ~~~-----------~~F~Id~~tG~i~~~~~~LD~E~~~~---------------------------------------- 178 (322)
T 2a62_A 150 EGQ-----------PYFSIEPETAIIKTALPNMDREAKEE---------------------------------------- 178 (322)
T ss_dssp ECT-----------TTEEECTTTCCEEECSSCCCGGGCSE----------------------------------------
T ss_pred cCC-----------CCEEEecCCCEEEecccCCCcccCCe----------------------------------------
Confidence 875 689999999999998 8999999888
Q ss_pred EEEEEEEEECCC----CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 241 YAFTLLSTDSGG----RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 241 y~l~V~a~D~g~----~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
|.|.|.|+|.|+ ++++++|+|.|.|+|||+|.|.+..|.+. +|++ |.|+.|++|+|+|+|.
T Consensus 179 y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~--~~gt~v~~v~A~D~D~ 244 (322)
T 2a62_A 179 YLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDV--VLGTAIGRVKANDQDI 244 (322)
T ss_dssp EEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCC--SSCCEEEEEECCCSSC
T ss_pred EEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCC--CCCcEEEEEEEEeCCC
Confidence 999999999886 47889999999999999999999999999 9999 5999999999999994
No 4
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1e-40 Score=328.16 Aligned_cols=281 Identities=20% Similarity=0.220 Sum_probs=222.6
Q ss_pred eeeEecceeEeeccccccccceEEEEEE--ecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceE
Q psy8640 6 LVWLQPMQCLIMRRGVVHRENIQVYLVW--YGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEH 83 (303)
Q Consensus 6 ~~~~~p~~~~i~e~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~ 83 (303)
-.|+- .++.|+||+. ++.......+. .+.++++.|+..|.- ....+.++|.|++.+|.|+++++||||.... |
T Consensus 6 ~~~~~-~~~~v~En~~-g~~~~~v~~~~~d~d~n~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~-y 80 (546)
T 1l3w_A 6 HDWVI-PPIKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQG--ADNPPQGVFRIEWETGWMLVTRPLDREEYDK-Y 80 (546)
T ss_dssp -CCCC-CCEEEESSCC-SSSCEEEEECCCSGGGSSCEEEEEEEBT--TTBSSTTSEEECTTTCEEEECSCCCTTTCCE-E
T ss_pred CCccc-ceeEecCCCC-CCCCcEEEEEEcCCCCCceEEEEEECCC--CCCCCCceEEEeCCccEEEECCcCCcccCce-E
Confidence 35775 7789999997 43322222322 234566666543210 1112457999999999999999999999999 9
Q ss_pred EEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCceEEEEE
Q psy8640 84 LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG---DYGKLNYSI 160 (303)
Q Consensus 84 ~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i~Y~i 160 (303)
.|.|+|+|+|. +++++.+.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.++|+|
T Consensus 81 ~l~v~A~D~~~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi 156 (546)
T 1l3w_A 81 VLSSHAVSENG----SPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSI 156 (546)
T ss_dssp EEEEEEEESSS----CBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEE
T ss_pred EEEEEEEeCCC----CcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEE
Confidence 99999999986 67788899999999999999999999999999999999999999999999998 689999999
Q ss_pred eeCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEE------------EEeecc------------
Q psy8640 161 ISAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTY------------SVWTRS------------ 215 (303)
Q Consensus 161 ~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~------------~~~~~~------------ 215 (303)
..+.+. ....+.|.|++.||.|++. ++||||....|.|+|.|.+ .+....
T Consensus 157 ~~~~~~-----~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 231 (546)
T 1l3w_A 157 LKQDPE-----EPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKT 231 (546)
T ss_dssp EEESSC-----CSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSE
T ss_pred eCCCCC-----cccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCcccccc
Confidence 987531 1133789999999999985 7999999999999999971 111111
Q ss_pred ----cccC---------------------CCce----------EEEe----------ecCceeeeeeecEEEEEEEEEEC
Q psy8640 216 ----LVWS---------------------RPMQ----------CLIM----------RRGVVFDYEARSRYAFTLLSTDS 250 (303)
Q Consensus 216 ----~~~~---------------------~~~~----------~~i~----------~~~~~lD~E~~~~y~l~V~a~D~ 250 (303)
+.|+ ..+. +.|. ...+.||||....|.|.|.|+|.
T Consensus 232 y~~~V~En~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~ 311 (546)
T 1l3w_A 232 YTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENA 311 (546)
T ss_dssp EEEEEESSSCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEES
T ss_pred ceEEEEeCCCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEEC
Confidence 1222 1111 1121 11246999999999999999997
Q ss_pred CC-----CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 251 GG-----RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 251 g~-----~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
++ ++++++|+|.|.|+|| +|.|.+..|.+. .|++ |.|+.|++|+|+|+|+
T Consensus 312 ~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~--~~g~~v~~v~A~D~D~ 367 (546)
T 1l3w_A 312 EPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDL--SRGEKIISLVAQDPDK 367 (546)
T ss_dssp SCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTC--CSSEEEEECCEECCCT
T ss_pred CCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCC--CCCCEEEEEEEECCCC
Confidence 63 4789999999999999 999999999999 9999 5999999999999994
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.7e-40 Score=340.38 Aligned_cols=285 Identities=20% Similarity=0.224 Sum_probs=222.4
Q ss_pred cccceeeEecceeEeeccccccccceEEEEEEe--cccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCC
Q psy8640 2 KTRSLVWLQPMQCLIMRRGVVHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTG 79 (303)
Q Consensus 2 ~~~~~~~~~p~~~~i~e~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~ 79 (303)
++.|+.|+. .++.|+||.. ++.......+.. +.++.+.|+..|.- ....+.++|.|++.||.|++.++||||..
T Consensus 151 ~r~~r~~~~-~~~~v~En~~-~~~~~~v~~v~~d~d~~~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~l~~~~~LDrE~~ 226 (880)
T 1q55_A 151 KRKKRDWVI-PPIKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQG--ADNPPQGVFRIEWETGWMLVTRPLDREEY 226 (880)
T ss_dssp -----CCCC-CCEEEESSCC-SSSCEEEEECCCSGGGSSCEEEEEEEBT--TTBSSTTSEEECTTTCEEEECSCCCTTTC
T ss_pred ceeeccccc-cceEEeCCCC-CCCCeEEEEEeeCCCCCceEEEEEECCC--CCCCcCCEEEEECCcCEEEECCccCcccc
Confidence 466788987 4789999997 222222222221 23456666543210 11134579999999999999999999999
Q ss_pred CceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCceE
Q psy8640 80 SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG---DYGKL 156 (303)
Q Consensus 80 ~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i 156 (303)
.. |.|+|+|+|++. +++++.+.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.+
T Consensus 227 ~~-y~l~v~A~D~g~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v 301 (880)
T 1q55_A 227 DK-YVLSSHAVSENG----SPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVL 301 (880)
T ss_dssp CE-EEEEEEEEESSS----CBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCC
T ss_pred Cc-cEEEEEEEECCC----CceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEE
Confidence 99 999999999986 67788899999999999999999999999999999999999999999999998 68999
Q ss_pred EEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEE------------EEeecc--------
Q psy8640 157 NYSIISAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTY------------SVWTRS-------- 215 (303)
Q Consensus 157 ~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~------------~~~~~~-------- 215 (303)
+|+|..+.+. ....+.|.||+.||.|++. +.||||....|.|+|.|.+ .+....
T Consensus 302 ~Ysi~~~~~~-----~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F 376 (880)
T 1q55_A 302 SYSILKQDPE-----EPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIF 376 (880)
T ss_dssp EEEEEEESSC-----CSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCB
T ss_pred EEEEcCCCCC-----cccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCc
Confidence 9999987531 1133789999999999985 7899999999999999871 111111
Q ss_pred --------cccC---------------------CCce----------EEEe----------ecCceeeeeeecEEEEEEE
Q psy8640 216 --------LVWS---------------------RPMQ----------CLIM----------RRGVVFDYEARSRYAFTLL 246 (303)
Q Consensus 216 --------~~~~---------------------~~~~----------~~i~----------~~~~~lD~E~~~~y~l~V~ 246 (303)
+.|+ ..+. +.|. ...+.||||....|.|+|.
T Consensus 377 ~~~~y~~~V~En~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~ 456 (880)
T 1q55_A 377 DPKTYTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQIT 456 (880)
T ss_dssp SCSEEEEEEESSSCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEEC
T ss_pred cccceEEEeecCCCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEE
Confidence 1222 1111 1111 1124699999999999999
Q ss_pred EEECCC-----CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 247 STDSGG-----RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 247 a~D~g~-----~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
|+|.+. ++++++|+|.|.|+|| +|+|.+..|.+. .|++ |.|+.|++|+|+|+|+
T Consensus 457 A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~--~~Gt~V~~v~A~D~D~ 516 (880)
T 1q55_A 457 VENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDL--SRGEKIISLVAQDPDK 516 (880)
T ss_dssp CEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTC--CSSEEEEECCEECCCT
T ss_pred EEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCC--CCCCEEEEEEEEeCCC
Confidence 999763 4789999999999999 999999999999 9999 5999999999999994
No 6
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=4.5e-39 Score=307.03 Aligned_cols=230 Identities=19% Similarity=0.282 Sum_probs=188.7
Q ss_pred cEEEeCCccEEEEcccCCCCCC---CceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCc--eEEEEeC
Q psy8640 58 IQAVDPLTGVLSVQQPLDYDTG---SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE--YLEFVGE 132 (303)
Q Consensus 58 ~F~Id~~tG~l~~~~~LD~E~~---~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~--~~~~V~E 132 (303)
+|.|+ .+|.|+++++||||.. .. |.|.|.|+|.|.++ ..++++.++|.|.|.|+|||+|.|.... |.+.|+|
T Consensus 48 ~f~v~-~tG~i~~~~~LD~E~~~~~~~-~~~~V~a~d~g~~~-~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E 124 (419)
T 3ubh_A 48 WVTVE-TNGAVRVKKKWDYEELGPEKT-IDFWVIITNMGHNA-GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQL 124 (419)
T ss_dssp SEEEC-TTSEEEESSCCCGGGSCTTCE-EEEEEEEEC--CCS-SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECT
T ss_pred cEEEC-CCcEEEECCccCccccCccce-EEEEEEEEeCCCCC-CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeC
Confidence 44443 7999999999999997 57 99999999987521 1267888999999999999999999887 7899999
Q ss_pred CCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEEEEEEEEEe
Q psy8640 133 NEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVW 212 (303)
Q Consensus 133 ~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~v~a~~~~~ 212 (303)
++++|+.|+++.|+|+|.|.| +.|+|..+... +.|.|++.+|.|++.+.||+|....|.|+|.|.+.-.
T Consensus 125 ~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~---------~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~ 193 (419)
T 3ubh_A 125 NAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTG---------GRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNG 193 (419)
T ss_dssp TCCTTCEEEECCEECSSTTCC--EEEEEEEESSS---------SCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEEECCCCCce--eEEEEEeCCCC---------CeEEEeCCceEEEEecccccccccEEEEEEEEEECCC
Confidence 999999999999999999886 89999876543 7899999999999999999999999999999975311
Q ss_pred ----------------ecc---------------cccCCC-----------------ceEEEee----------------
Q psy8640 213 ----------------TRS---------------LVWSRP-----------------MQCLIMR---------------- 228 (303)
Q Consensus 213 ----------------~~~---------------~~~~~~-----------------~~~~i~~---------------- 228 (303)
... +.||.| +.+.+..
T Consensus 194 ~~~~~~~~~t~~v~I~V~dndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi~~~~~~~~~F~I~~~tG~ 273 (419)
T 3ubh_A 194 KVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGI 273 (419)
T ss_dssp EC--CCEEECCCEEEEEEESCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCCCEEEEEESSSCCSSEEECTTTCE
T ss_pred CccCcccccceEEEEEEECCCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCceEEEEecCCCCCCcEEEECCCCE
Confidence 100 122222 2233321
Q ss_pred --cCceeeeeeec---EEEEEEEEEE-CCCCeEEEEEEEEEeecCCCCCeeCCCeeEE-E-ecCCCCCCCcEEEEEEEEe
Q psy8640 229 --RGVVFDYEARS---RYAFTLLSTD-SGGRTCKVKVRVEIESRDEFHPQFTERTFKF-I-LSGTDLPVGYVVGHLRLVR 300 (303)
Q Consensus 229 --~~~~lD~E~~~---~y~l~V~a~D-~g~~s~~~~v~I~V~DvNdn~P~F~~~~y~~-~-~e~~~~p~gt~v~~v~A~D 300 (303)
..+.||||... .|.|.|.|+| .|+++++++|+|.|+|+|||+|.|....|.. . .|++ |.|+.|++|+|+|
T Consensus 274 i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~--~~gt~v~~v~A~D 351 (419)
T 3ubh_A 274 VKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDI--PLGTSILRVKAMD 351 (419)
T ss_dssp EEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTC--CTTCEEEECCEEC
T ss_pred EEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCC--CCCCEEEEEEEEe
Confidence 11469999875 7999999995 4557889999999999999999999999987 5 9998 6999999999999
Q ss_pred CCC
Q psy8640 301 FRS 303 (303)
Q Consensus 301 ~D~ 303 (303)
+|+
T Consensus 352 ~D~ 354 (419)
T 3ubh_A 352 SDS 354 (419)
T ss_dssp SSC
T ss_pred CCC
Confidence 995
No 7
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.4e-38 Score=276.08 Aligned_cols=201 Identities=25% Similarity=0.347 Sum_probs=163.6
Q ss_pred eEecceeEeecccc--ccccceEEEEEE--ecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceE
Q psy8640 8 WLQPMQCLIMRRGV--VHRENIQVYLVW--YGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEH 83 (303)
Q Consensus 8 ~~~p~~~~i~e~~~--~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~ 83 (303)
|.- .++.|.||.. .+....+. +.. .+ ++.+.|.. ...+...+|.|++.+|.|++.++||||.... |
T Consensus 3 w~~-~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l------~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y 72 (215)
T 2a4e_A 3 WVW-NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYIL------SGEGAGTIFVIDDKSGNIHATKTLDREERAQ-Y 72 (215)
T ss_dssp SCC-CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEE------EETTBTTTEEECTTTCEEEECSCCCTTTCSE-E
T ss_pred cEE-eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEE------ECCCCCCeEEEECCceEEEECCccCCccCCE-E
Confidence 665 5788999953 33333222 111 12 35566643 2233346999999999999999999999999 9
Q ss_pred EEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCceEEEEE
Q psy8640 84 LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK---GDYGKLNYSI 160 (303)
Q Consensus 84 ~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~---g~n~~i~Y~i 160 (303)
.|+|.|+|++.. +++++.+.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|
T Consensus 73 ~l~v~a~D~~~~---~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i 149 (215)
T 2a4e_A 73 TLMAQAVDRDTN---RPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSI 149 (215)
T ss_dssp EEEEEEEETTTC---CEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEE
T ss_pred EEEEEEEECCCC---CcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEE
Confidence 999999998741 4678899999999999999999999999999999999999999999999997 7899999999
Q ss_pred eeCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeec
Q psy8640 161 ISAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARS 239 (303)
Q Consensus 161 ~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~ 239 (303)
..+. +.|.|++.||.|+++ ++||||....
T Consensus 150 ~~~~-----------~~F~Id~~tG~I~~~~~~LD~E~~~~--------------------------------------- 179 (215)
T 2a4e_A 150 LEGQ-----------PYFSVEAQTGIIRTALPNMDREAKEE--------------------------------------- 179 (215)
T ss_dssp EEST-----------TTEEECTTTCEEEECSSCCCSSSCSE---------------------------------------
T ss_pred eCCC-----------CcEEEeCCccEEEEcccCCCcccCCE---------------------------------------
Confidence 9875 689999999999999 9999999888
Q ss_pred EEEEEEEEEECCC----CeEEEEEEEEEeecCCCCCe
Q psy8640 240 RYAFTLLSTDSGG----RTCKVKVRVEIESRDEFHPQ 272 (303)
Q Consensus 240 ~y~l~V~a~D~g~----~s~~~~v~I~V~DvNdn~P~ 272 (303)
|.|.|.|+|.|+ ++++++|+|.|.|+|||+|+
T Consensus 180 -y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 180 -YHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp -EEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred -EEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 999999999885 48899999999999999995
No 8
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=5.8e-38 Score=288.83 Aligned_cols=190 Identities=20% Similarity=0.268 Sum_probs=167.6
Q ss_pred CCcccEEEeCCccEEEEcccCCCCCC-----CceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCc--e
Q psy8640 54 QRLAIQAVDPLTGVLSVQQPLDYDTG-----SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITE--Y 126 (303)
Q Consensus 54 ~~~~~F~Id~~tG~l~~~~~LD~E~~-----~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~--~ 126 (303)
....+|.|++ +|.|++.++||||.. .. |.|.++|.|++.+ +++++.++|.|.|.|+|||+|.|.+.. |
T Consensus 39 ~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~-~~l~v~a~d~~~~---~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y 113 (316)
T 3ubf_A 39 DDNPWVTVET-NGAVRVKKKWDYEELGPEKTID-FWVIITNMGHNAG---IKYTDNQRVIILVKDVNDEPPYFINRPLPM 113 (316)
T ss_dssp SCCSSEEECT-TSEEEESSCCCGGGSCTTCEEE-EEEEEEC----------CCCEEEEEEEEEECTTCCCCEECCSSSSE
T ss_pred CCCCeEEECC-CeEEEECCccChhhcccccceE-EEEEEEEcCCCCC---CcccceEEEEEEEEECCCCCCccCCCCCCE
Confidence 4446899999 999999999999994 35 8899999998862 367999999999999999999999887 8
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEEEE
Q psy8640 127 LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLL 206 (303)
Q Consensus 127 ~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~v~ 206 (303)
.+.|+|++++|+.|+++.|+|+|.|.| ++|+|..+... +.|.|++.+|.|++.++||||....
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~---------~~F~Id~~tG~i~~~~~lD~e~~~~------ 176 (316)
T 3ubf_A 114 QAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTG---------GRFEVDERSGVVRTRGTDLFQLDME------ 176 (316)
T ss_dssp EEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESS---------SCEEECTTTCEEEECSSCCCCTTCE------
T ss_pred EEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCC---------CEEEEECCccEEEECCcCCcccCcE------
Confidence 999999999999999999999999887 99999876433 7899999999999999999999988
Q ss_pred EEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC------CeEEEEEEEEEeecCCCCCeeCCCeeEE
Q psy8640 207 STYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG------RTCKVKVRVEIESRDEFHPQFTERTFKF 280 (303)
Q Consensus 207 a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~------~s~~~~v~I~V~DvNdn~P~F~~~~y~~ 280 (303)
|.|.|.|+|.|+ +++++.++|.|.| |||+|+|.+..|.+
T Consensus 177 ----------------------------------y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~ 221 (316)
T 3ubf_A 177 ----------------------------------YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEA 221 (316)
T ss_dssp ----------------------------------EEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEE
T ss_pred ----------------------------------EEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceE
Confidence 999999999875 3677899999999 99999999999999
Q ss_pred E-ecCCCCCCCcEEEEEEEEeCC
Q psy8640 281 I-LSGTDLPVGYVVGHLRLVRFR 302 (303)
Q Consensus 281 ~-~e~~~~p~gt~v~~v~A~D~D 302 (303)
. +|++ |.|+.|++|+|+|+|
T Consensus 222 ~v~En~--~~gt~v~~v~A~D~D 242 (316)
T 3ubf_A 222 EIPENQ--KKDSDIISIKAKSFA 242 (316)
T ss_dssp EEETTC--CTTCEEEECCEECTT
T ss_pred EEeCCC--CCCCEEEEEEEEeCC
Confidence 9 9999 699999999999987
No 9
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.7e-37 Score=305.62 Aligned_cols=268 Identities=21% Similarity=0.254 Sum_probs=213.4
Q ss_pred ceeEeeccccccccceEEEEEEe--c---ccCceeeeecccccccCCCCcccEEEeCCccEEEEc-ccCCCCCCCceEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWY--G---STSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQ-QPLDYDTGSSEHLL 85 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~--~---~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LD~E~~~~~~~l 85 (303)
....|+|+.++|....+..+..- + .++.+.|...++-+. ....++|.|++.+|.|++. ++||||.... |.|
T Consensus 113 y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~--~~~~~~F~id~~tG~i~~~~~~LDrE~~~~-y~l 189 (550)
T 3q2v_A 113 FEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPE--LPHKNMFTVNRDTGVISVLTSGLDRESYPT-YTL 189 (550)
T ss_dssp EEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESC--CSSSCSEEECTTTCEEEECSSCCCTTTCSE-EEE
T ss_pred eEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCC--CCcCCceEEcCCCeEEEEccCCCCcccCcE-EEE
Confidence 45789999998887776665443 2 356677755332211 1245799999999999985 7999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCc--eEEEEEeeC
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYG--KLNYSIISA 163 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~--~i~Y~i~~~ 163 (303)
.|+|+|+|. ++++++++|.|.|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+|.|.|+ .+.|+|..
T Consensus 190 ~V~A~D~g~----~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~- 263 (550)
T 3q2v_A 190 VVQAADLQG----EGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN- 263 (550)
T ss_dssp EEEEESGGG----TSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-
T ss_pred EEEEEcCCC----CCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-
Confidence 999999987 68999999999999999999999999999999999 99999999999999999877 56799987
Q ss_pred CCCCCcccCCCcCcEEEE----CCCcEEEEcccCcccccceEEEEEEEEEE---------------Eeecc---------
Q psy8640 164 AASGYTDVDDSWKLFRVD----ALTGLVTTNAVFDYEARSRYAFTLLSTYS---------------VWTRS--------- 215 (303)
Q Consensus 164 ~~~~~~~~~~~~~~F~Id----~~tG~I~~~~~LD~e~~~~~~l~v~a~~~---------------~~~~~--------- 215 (303)
... +.|.|+ ..+|.|++.++||||....|.|+|.|.+. +....
T Consensus 264 ~~~---------~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~~ 334 (550)
T 3q2v_A 264 DPD---------QQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFMP 334 (550)
T ss_dssp CSS---------CCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEESS
T ss_pred CCC---------CcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEcC
Confidence 322 789998 78999999999999999999999998742 11111
Q ss_pred ------cccC--------------------CCceEEEee----------------cCceeeeeee-----cEEEEEEEEE
Q psy8640 216 ------LVWS--------------------RPMQCLIMR----------------RGVVFDYEAR-----SRYAFTLLST 248 (303)
Q Consensus 216 ------~~~~--------------------~~~~~~i~~----------------~~~~lD~E~~-----~~y~l~V~a~ 248 (303)
+.++ ..+.+.|.. ..+.||||.. ..|.|+|.|+
T Consensus 335 ~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~ 414 (550)
T 3q2v_A 335 AERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIAT 414 (550)
T ss_dssp SSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEE
T ss_pred cceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEE
Confidence 1122 222333321 1246999998 9999999999
Q ss_pred ECCC--CeEEEEEEEEEeecCCCCCeeCCCeeEEEecCCCCCCCcEEEEEEEEeCCC
Q psy8640 249 DSGG--RTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 249 D~g~--~s~~~~v~I~V~DvNdn~P~F~~~~y~~~~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
|.|. ++++++|+|.|.|+|||+|+|.+..+.+ .|+. |.|.+ |+|+|+|.
T Consensus 415 D~g~p~~s~~~~v~I~V~DvNDn~P~~~~~~~~v-~e~~--~~~~~---v~A~D~D~ 465 (550)
T 3q2v_A 415 DDGSPIATGTGTLLLVLLDVNDNAPIPEPRNMQF-CQRN--PQPHI---ITILDPDL 465 (550)
T ss_dssp CCSSSCCCEEEEEEEEEECCCCCCCEESCSSCEE-ESSS--CCCEE---EEEECCSC
T ss_pred eCCCCcceeEEEEEEEEEeCCCCCCcCcCcccce-eecC--CCcEE---EEEECCCC
Confidence 9988 4889999999999999999998654444 5776 36654 99999995
No 10
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.6e-37 Score=306.23 Aligned_cols=273 Identities=18% Similarity=0.175 Sum_probs=216.7
Q ss_pred ceeEeeccccccccceEEEEEEec----ccCceeeeecccccccCCCCcccEEEeCCccEEEEcc-cCCCCCCCceEEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWYG----STSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQ-PLDYDTGSSEHLLI 86 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~-~LD~E~~~~~~~l~ 86 (303)
....|+||.++|+...+..+..-. .++++.|+..+..+. ....++|.|++.+|+|++.+ .||||.... |.|.
T Consensus 113 y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~--~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~-y~l~ 189 (559)
T 3q2w_A 113 WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPS--TPSPNMFTINNETGDIITVAAGLDREKVQQ-YTLI 189 (559)
T ss_dssp EEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESC--CSCTTCEEECTTTCEEEECCSCCCTTTCCE-EEEE
T ss_pred eEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCC--CCCcceEEEeCCceEEEEEeccCCcccCCE-EEEE
Confidence 357899999999988887776553 467777765332211 11237899999999999997 999999999 9999
Q ss_pred EEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCC--CceEEEEEeeCC
Q psy8640 87 LKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGD--YGKLNYSIISAA 164 (303)
Q Consensus 87 i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~--n~~i~Y~i~~~~ 164 (303)
|+|+|++..+ .++++++++|.|.|.|+|||+|.|.+..|.+.|+|+. +|+.|+++.|+|+|.+. |+.+.|+|..++
T Consensus 190 V~A~D~~g~p-~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~ 267 (559)
T 3q2w_A 190 IQATDMEGNP-TYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGD 267 (559)
T ss_dssp EEEEHHHHCT-TTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESC
T ss_pred EEEEECCCCC-CCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCC
Confidence 9999974310 1358999999999999999999999999999999997 89999999999999986 678999999876
Q ss_pred CCCCcccCCCcCcEEE----ECCCcEEEEcccCcccccceEEEEEEEEEE------------------Eeeccc------
Q psy8640 165 ASGYTDVDDSWKLFRV----DALTGLVTTNAVFDYEARSRYAFTLLSTYS------------------VWTRSL------ 216 (303)
Q Consensus 165 ~~~~~~~~~~~~~F~I----d~~tG~I~~~~~LD~e~~~~~~l~v~a~~~------------------~~~~~~------ 216 (303)
.. +.|.| +..+|.|++.++||||....|.|+|.|.+. +....+
T Consensus 268 ~~---------~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND~P~f 338 (559)
T 3q2w_A 268 PT---------GRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYF 338 (559)
T ss_dssp TT---------CCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCCCCEE
T ss_pred CC---------CceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCCCCcc
Confidence 43 78999 578999999999999999999999998631 111111
Q ss_pred ---------ccCC--------------------CceEEEe----------------ecCceeeeeee----cEEEEEEEE
Q psy8640 217 ---------VWSR--------------------PMQCLIM----------------RRGVVFDYEAR----SRYAFTLLS 247 (303)
Q Consensus 217 ---------~~~~--------------------~~~~~i~----------------~~~~~lD~E~~----~~y~l~V~a 247 (303)
.|+. .+.+.+. ...+.||||.. ..|.|+|.|
T Consensus 339 ~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A 418 (559)
T 3q2w_A 339 APNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLA 418 (559)
T ss_dssp SSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEE
T ss_pred cccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCcccccccCCEEEEEEEE
Confidence 2222 2222221 11246999986 999999999
Q ss_pred EECCC--CeEEEEEEEEEeecCCCCCeeCCCeeEEEecCCCCCCCcEEEEEEEEeCCC
Q psy8640 248 TDSGG--RTCKVKVRVEIESRDEFHPQFTERTFKFILSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 248 ~D~g~--~s~~~~v~I~V~DvNdn~P~F~~~~y~~~~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
+|.|. ++++++|+|.|+|+|||+|.|.+..+.++ |+. . ..+++|+|+|+|+
T Consensus 419 ~D~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~~v~-e~~---~-~~v~~v~A~D~D~ 471 (559)
T 3q2w_A 419 SDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEAETC-ETP---E-PNSINITALDYDI 471 (559)
T ss_dssp EECSSSCCEEEEEEEEEEECCSCCCCEESCTTCCCC-SCC---C-TTCEEECEECSCC
T ss_pred EcCCCCcceEEEEEEEEEEEccCCCCcccCCceEEe-ecC---C-CcEEEEEEEcCCC
Confidence 99988 48899999999999999999998777665 433 2 3367999999995
No 11
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=287.33 Aligned_cols=209 Identities=17% Similarity=0.091 Sum_probs=172.8
Q ss_pred ceeEeeccccccccceEEEEEEecccCceeeeecc----cccccCCCCcccEEEeCCccEEEEcccCCCCCCCceE----
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWYGSTSRLCRRTCG----TIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEH---- 83 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~---- 83 (303)
....|+|+.++|+...+..+..-.....+.|+..+ .+++... ...+|.|++.||.|++.++||||.... |
T Consensus 8 Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~~~~ 85 (246)
T 2x2u_A 8 YWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEK-LSVRN 85 (246)
T ss_dssp EEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHH-HHHTS
T ss_pred eEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCcCChhHhhh-hcccc
Confidence 45789999999998888777654321123343331 1222222 568999999999999999999999999 9
Q ss_pred --------EEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCc----------CCCCceEEEEeCCCCCCeEEEEEEE
Q psy8640 84 --------LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPK----------FPITEYLEFVGENEPIGSSVFTARA 145 (303)
Q Consensus 84 --------~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~----------f~~~~~~~~V~E~~~~gt~v~~v~A 145 (303)
.|+|.|+|+|.+. ++++++++|.|.|.|+|||+|. |.+..|.+.|+|+.++|+.|+++.|
T Consensus 86 ~G~p~~~~~l~V~a~D~g~~~--~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A 163 (246)
T 2x2u_A 86 RGFPLLTVYLKVFLSPTSLRE--GECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLL 163 (246)
T ss_dssp TTSCCCEEEEEEECC---------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCH
T ss_pred CCCcccceEEEEEEEcCCCCC--CcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEE
Confidence 9999999998720 1678889999999999999999 9999999999999999999999999
Q ss_pred EeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEEEEEEEEEeecccccCCCceEE
Q psy8640 146 TDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCL 225 (303)
Q Consensus 146 ~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~ 225 (303)
+|+|.|.|++++|+|..+.. ..|.|++.||.|++.++||||....
T Consensus 164 ~D~D~g~n~~i~Y~i~~~~~----------~~F~Id~~tG~i~~~~~LDrE~~~~------------------------- 208 (246)
T 2x2u_A 164 PVQFLCPQISVAYRLLEGEG----------LPFRSAPDSLEVSTRWALDREQREK------------------------- 208 (246)
T ss_dssp HHHHHCTTSCEEEEEESCTT----------SSEECCTTCCEEEESSCBCTTTCSE-------------------------
T ss_pred EcCCCCCCcEEEEEEccCCC----------CCEEEECCcCEEEeCCccCccccce-------------------------
Confidence 99999999999999998742 7899999999999999999999988
Q ss_pred EeecCceeeeeeecEEEEEEEEEE-CCC--CeEEEEEEEEEeecCCCCCeeC
Q psy8640 226 IMRRGVVFDYEARSRYAFTLLSTD-SGG--RTCKVKVRVEIESRDEFHPQFT 274 (303)
Q Consensus 226 i~~~~~~lD~E~~~~y~l~V~a~D-~g~--~s~~~~v~I~V~DvNdn~P~F~ 274 (303)
|.|.|.|+| .|+ ++++++|+|.|+|+|||+|.|.
T Consensus 209 ---------------y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 209 ---------------YELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp ---------------EEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred ---------------EEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 999999998 454 4889999999999999999996
No 12
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=5.5e-38 Score=308.72 Aligned_cols=273 Identities=21% Similarity=0.211 Sum_probs=217.6
Q ss_pred eeeEe-cceeEeeccccccccceEEEEEEe--c---ccCceeeeecccccccCCCCcccEEEeCCccEEEEc-ccCCCCC
Q psy8640 6 LVWLQ-PMQCLIMRRGVVHRENIQVYLVWY--G---STSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQ-QPLDYDT 78 (303)
Q Consensus 6 ~~~~~-p~~~~i~e~~~~~~~~~~~~~i~~--~---~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LD~E~ 78 (303)
.++.+ +..+.|+||.++|+...+..+..- + .++.+.|+..+.-+- ....++|.|++.||.|++. ++||||.
T Consensus 112 P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~--~~~~~~F~Id~~tG~i~~~~~~LD~E~ 189 (546)
T 1l3w_A 112 PKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE--EPIPNLFTINRETGVISLIGTGLDREK 189 (546)
T ss_dssp CEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC--CSCSCSEEECTTTCEEEECSCCCCTTT
T ss_pred CEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCC--cccCCcEEEeCCCceEEEeccCCCccc
Confidence 34443 346789999999988777766554 2 257777765332110 1145799999999999996 7899999
Q ss_pred CCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCC--CCCCceE
Q psy8640 79 GSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMD--KGDYGKL 156 (303)
Q Consensus 79 ~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D--~g~n~~i 156 (303)
... |.|.|+|+|+|. ++++++++|.|.|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+| .|.|+.+
T Consensus 190 ~~~-y~l~V~A~D~g~----~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v 263 (546)
T 1l3w_A 190 FPE-YTLTVQATDLEG----AGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQA 263 (546)
T ss_dssp CCE-EEEEEEEEHHHH----TSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCE
T ss_pred Cce-EEEEEEEEECCC----CCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEE
Confidence 999 999999999987 68999999999999999999999999999999999 999999999999999 6789999
Q ss_pred EEEEeeCCCCCCcccCCCcCcEEEE--C--CCcEEEEcccCcccccceEEEEEEEEEE---------------Eeec---
Q psy8640 157 NYSIISAAASGYTDVDDSWKLFRVD--A--LTGLVTTNAVFDYEARSRYAFTLLSTYS---------------VWTR--- 214 (303)
Q Consensus 157 ~Y~i~~~~~~~~~~~~~~~~~F~Id--~--~tG~I~~~~~LD~e~~~~~~l~v~a~~~---------------~~~~--- 214 (303)
+|+|.. +.. +.|.|+ + .+|.|++.++||||....|.|+|.|.+. +...
T Consensus 264 ~y~i~~-~~~---------~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvN 333 (546)
T 1l3w_A 264 VYKIRV-NEG---------GFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVN 333 (546)
T ss_dssp ECCBSC-CTT---------SCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCC
T ss_pred EEEEEe-CCC---------ceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCC
Confidence 999987 432 789996 3 6899999999999999999999998741 1111
Q ss_pred ------------ccccCCC--------------------ceEEEee----------------cCceeeeeee----cEEE
Q psy8640 215 ------------SLVWSRP--------------------MQCLIMR----------------RGVVFDYEAR----SRYA 242 (303)
Q Consensus 215 ------------~~~~~~~--------------------~~~~i~~----------------~~~~lD~E~~----~~y~ 242 (303)
.+.++.+ +.+.|.. ..+.||||.. ..|.
T Consensus 334 D~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~ 413 (546)
T 1l3w_A 334 EAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYT 413 (546)
T ss_dssp CCCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCE
T ss_pred CCCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCccccCCCCEEE
Confidence 1222222 2222211 1246999997 9999
Q ss_pred EEEEEEECCC--CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 243 FTLLSTDSGG--RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 243 l~V~a~D~g~--~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
|.|.|+|.|. ++++++|+|.|.|+|||+|.|.+. .+. .|+. |.|+ + |+|+|+|+
T Consensus 414 l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~--~~~v~e~~--~~g~-v--v~A~D~D~ 470 (546)
T 1l3w_A 414 VIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQN--PEPQ-V--LTISDADI 470 (546)
T ss_dssp EEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSS--CCCE-E--EEBCCSSC
T ss_pred EEEEEEECCCCCcEeEEEEEEEEEECCCCcCCccCc--eEEEecCC--CCCe-E--EEEEeCCC
Confidence 9999999886 478899999999999999999864 455 7888 5887 3 99999995
No 13
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=6.1e-37 Score=267.25 Aligned_cols=204 Identities=25% Similarity=0.303 Sum_probs=173.2
Q ss_pred eEecceeEeeccccccccceEEEEEEe--cccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEEE
Q psy8640 8 WLQPMQCLIMRRGVVHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLL 85 (303)
Q Consensus 8 ~~~p~~~~i~e~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l 85 (303)
|+.| ++.|+||.+ ++......++.- +.++.+.|+..+.- ...+..++|.|++.+|.|++.++||||.... |.|
T Consensus 2 w~~~-~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~l 76 (215)
T 2qvi_A 2 WVIP-PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPG--ADQPPTGIFIINPISGQLSVTKPLDRELIAR-FHL 76 (215)
T ss_dssp CCCC-CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTT--SSSTTCSSEEECTTTCEEEECSCCCTTTCSE-EEE
T ss_pred cccC-cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCC--CCCCCCCcEEEeCCccEEEECcccCcccCCe-EEE
Confidence 9987 999999998 655555554432 44567777543311 0123468999999999999999999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCC--CCCceEEEEEeeC
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK--GDYGKLNYSIISA 163 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~--g~n~~i~Y~i~~~ 163 (303)
+|.|+|+|. +++++++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|..+
T Consensus 77 ~v~a~D~g~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~ 152 (215)
T 2qvi_A 77 RAHAVDING----NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQ 152 (215)
T ss_dssp EEEEEETTT----CCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEEC
T ss_pred EEEEEECCC----CceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecC
Confidence 999999987 7889999999999999999999999999999999999999999999999999 6899999999987
Q ss_pred CCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEE
Q psy8640 164 AASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYA 242 (303)
Q Consensus 164 ~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~ 242 (303)
.+. .+..+.|.|++.+|.|++. ++||||.... |.
T Consensus 153 ~~~-----~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~----------------------------------------y~ 187 (215)
T 2qvi_A 153 APS-----TPSPNMFTINNETGDIITVAAGLDREKVQQ----------------------------------------YT 187 (215)
T ss_dssp SSC-----CSSTTCEEECTTTCEEEECSCCCCTTTCSE----------------------------------------EE
T ss_pred CCC-----CCcCCeEEEcCCCcEEEEecCCCCcccCCe----------------------------------------EE
Confidence 631 1133789999999999995 7999999888 99
Q ss_pred EEEEEEECCC-----CeEEEEEEEEEee
Q psy8640 243 FTLLSTDSGG-----RTCKVKVRVEIES 265 (303)
Q Consensus 243 l~V~a~D~g~-----~s~~~~v~I~V~D 265 (303)
|.|.|+|.|+ ++++++|+|.|+|
T Consensus 188 l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 188 LIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 9999999875 3789999999987
No 14
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=5.4e-37 Score=267.15 Aligned_cols=204 Identities=21% Similarity=0.305 Sum_probs=172.2
Q ss_pred eEecceeEeecccc--ccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEEE
Q psy8640 8 WLQPMQCLIMRRGV--VHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLL 85 (303)
Q Consensus 8 ~~~p~~~~i~e~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l 85 (303)
|+-| ++.|+||.+ .+....+..+ .-+.++++.|+..+.- ..+++.++|.|++.||.|++.++||||.... |.|
T Consensus 2 wv~~-~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~l 76 (213)
T 3qrb_A 2 WVIA-AISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQG--ADKPPVGVFIIERETGWLKVTQPLDREAIAK-YIL 76 (213)
T ss_dssp CCEE-EEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBT--TTBSSTTSEEECTTTCEEEECSCCCTTTCSE-EEE
T ss_pred cccC-CEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCC--CCCCCCCeEEEECCCCEEEECCccCcccCce-EEE
Confidence 7775 999999998 3433444333 3345567777553321 1234557999999999999999999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCceEEEEEee
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKG---DYGKLNYSIIS 162 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i~Y~i~~ 162 (303)
.|.|+|++. +++++++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.| .|+.++|+|..
T Consensus 77 ~v~a~D~~~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~ 152 (213)
T 3qrb_A 77 YSHAVSSNG----EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVS 152 (213)
T ss_dssp EEEEEETTS----CBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEE
T ss_pred EEEEEeCCC----CcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEcc
Confidence 999999987 67888999999999999999999999999999999999999999999999999 89999999998
Q ss_pred CCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEE
Q psy8640 163 AAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRY 241 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y 241 (303)
+.+. ....+.|.|++.+|.|++. ++||||.... |
T Consensus 153 ~~~~-----~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~----------------------------------------y 187 (213)
T 3qrb_A 153 QDPE-----LPHKNMFTVNRDTGVISVLTSGLDRESYPT----------------------------------------Y 187 (213)
T ss_dssp EESC-----CSCSCSEEECTTTCEEEECSSCCCTTTCCE----------------------------------------E
T ss_pred CCCC-----CCcCCeEEEECCCcEEEEccCCCCCccCce----------------------------------------E
Confidence 7532 2234789999999999997 7999999988 9
Q ss_pred EEEEEEEECCC--CeEEEEEEEEEee
Q psy8640 242 AFTLLSTDSGG--RTCKVKVRVEIES 265 (303)
Q Consensus 242 ~l~V~a~D~g~--~s~~~~v~I~V~D 265 (303)
.|.|.|+|.|+ ++++++|+|.|+|
T Consensus 188 ~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 188 TLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999999875 5889999999987
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=4.4e-37 Score=267.18 Aligned_cols=191 Identities=29% Similarity=0.386 Sum_probs=169.9
Q ss_pred eEeeccccccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEEEEEEEEECC
Q psy8640 14 CLIMRRGVVHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLLILKVEDGG 93 (303)
Q Consensus 14 ~~i~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l~i~a~D~g 93 (303)
+.|+|+.++|+...+..+..-. .+.+.|+. ..++..++|.|++.+|.|++.++||||.... |.|.|.|+|++
T Consensus 17 ~~V~E~~~~Gt~v~~v~A~D~D-~~~~~y~i------~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~-y~l~v~a~D~~ 88 (210)
T 3mvs_A 17 LLISEDTPVGSSVTQLLARDMD-NDPLVFGV------SGEEASRFFAVEPDTGVVWLRQPLDRETKSE-FTVEFSVSDHQ 88 (210)
T ss_dssp EEEETTCCTTCEEEECCEECTT-CCCCEEEE------ESHHHHHHEEECTTTCEEEESSCCCTTTCCE-EEEEEEEECSS
T ss_pred EEEeCCCCCCCEEEEEEEEeCC-CCcEEEEE------eCCCCCCcEEEeCCCCEEEECCccCCcccce-EEEEEEEEeCC
Confidence 5899999999988877664432 35566643 3334457899999999999999999999999 99999999976
Q ss_pred CCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCC
Q psy8640 94 KPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDD 173 (303)
Q Consensus 94 ~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~ 173 (303)
. ..++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..+.
T Consensus 89 ~-------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~--------- 152 (210)
T 3mvs_A 89 G-------VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPS--------- 152 (210)
T ss_dssp C-------EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCC---------
T ss_pred C-------CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCC---------
Confidence 4 367899999999999999999999999999999999999999999999999999999998754
Q ss_pred CcCcEEEECCCcEEEEcccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC-
Q psy8640 174 SWKLFRVDALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG- 252 (303)
Q Consensus 174 ~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~- 252 (303)
+.|.|++.+|.|++.++||||.... |.|.|.|+|.|+
T Consensus 153 --~~F~Id~~tG~i~~~~~LD~E~~~~----------------------------------------y~l~V~a~D~g~~ 190 (210)
T 3mvs_A 153 --PFFAIDSARGIVTVIQELDYEVTQA----------------------------------------YQLTVNATDQDKT 190 (210)
T ss_dssp --SSEEECTTTCEEEECSCCCTTTCSE----------------------------------------EEEEEEEEECCSS
T ss_pred --CCEEEeCCcEEEEECCcCCCcccce----------------------------------------EEEEEEEEECCCC
Confidence 7899999999999999999999998 999999999885
Q ss_pred --CeEEEEEEEEEeecCCCC
Q psy8640 253 --RTCKVKVRVEIESRDEFH 270 (303)
Q Consensus 253 --~s~~~~v~I~V~DvNdn~ 270 (303)
++++++|+|.|.|+|||+
T Consensus 191 ~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 191 RPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp SCCEEEEEEEEEEECCCCCC
T ss_pred CCCEEEEEEEEEEEccCCCC
Confidence 488999999999999975
No 16
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.2e-35 Score=259.58 Aligned_cols=204 Identities=25% Similarity=0.296 Sum_probs=170.0
Q ss_pred eeEecceeEeecccccc--ccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 7 VWLQPMQCLIMRRGVVH--RENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
.|..| ++.|+||.+.+ ....+..+. .....+.|+..|. -..+++.++|.|++.+|.|++.++||||.... |.
T Consensus 2 ~w~~~-~~~V~En~~~g~~~~v~~v~a~--D~d~~i~Y~i~~~--~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~ 75 (218)
T 3k5r_A 2 GIVVS-PILIPENQRQPFPRDVGKVVDS--DRPEGSKFRLTGK--GVDQDPKGTFRINENTGSVSVTRTLDRETIAT-YQ 75 (218)
T ss_dssp CCBCC-CEEEETTCCSSCCEEEEECBCT--TCCTTCEEEEEEB--TTTBSSTTSEEECTTTCEEEECSCCCTTTCSE-EE
T ss_pred CcccC-cEEEecCCCCCCCEEEEEEEec--CCCceEEEEEEcC--CCCCCCCCeEEEeCCceEEEECCcCCcccCCE-EE
Confidence 47774 89999999987 333333321 1222555654331 12345568999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCC--CCCceEEEEEee
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK--GDYGKLNYSIIS 162 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~--g~n~~i~Y~i~~ 162 (303)
|+|.|+|+|. +++++++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|..
T Consensus 76 l~v~a~D~g~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~ 151 (218)
T 3k5r_A 76 LYVETTDASG----KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQ 151 (218)
T ss_dssp EEEEEECSSS----CEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEE
T ss_pred EEEEEEECCC----CceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEec
Confidence 9999999987 6789999999999999999999999999999999999999999999999999 679999999998
Q ss_pred CCCCCCcccCCCcCcEEEECCCcEEEEc---ccCcccc--cceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeee
Q psy8640 163 AAASGYTDVDDSWKLFRVDALTGLVTTN---AVFDYEA--RSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEA 237 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~F~Id~~tG~I~~~---~~LD~e~--~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~ 237 (303)
+.+. ....++|.||+.+|.|++. ++||||. ...
T Consensus 152 ~~~~-----~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~------------------------------------- 189 (218)
T 3k5r_A 152 QTPD-----KPSPNMFYIDPEKGDIVTVVSPALLDRETLENPK------------------------------------- 189 (218)
T ss_dssp EESC-----CSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSE-------------------------------------
T ss_pred CCCC-----CCcCCEEEEECCccEEEEeccCCCCCccccCCCe-------------------------------------
Confidence 7542 1223679999999999987 6999999 667
Q ss_pred ecEEEEEEEEEECC----CCeEEEEEEEEEee
Q psy8640 238 RSRYAFTLLSTDSG----GRTCKVKVRVEIES 265 (303)
Q Consensus 238 ~~~y~l~V~a~D~g----~~s~~~~v~I~V~D 265 (303)
|.|.|.|+|.| +++++++|+|.|+|
T Consensus 190 ---y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 190 ---YELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp ---EEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred ---EEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 99999999998 46899999999987
No 17
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.7e-36 Score=312.09 Aligned_cols=267 Identities=22% Similarity=0.226 Sum_probs=215.1
Q ss_pred ceeEeeccccccccceEEEEEEe--c---ccCceeeeecccccccCCCCcccEEEeCCccEEEEc-ccCCCCCCCceEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWY--G---STSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQ-QPLDYDTGSSEHLL 85 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~--~---~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LD~E~~~~~~~l 85 (303)
....|+||.++|+...+..+..- + .++.+.|+..+..+- ....++|.|++.||.|++. +.||||.... |.|
T Consensus 268 y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~--~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~-y~l 344 (880)
T 1q55_A 268 FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE--EPIPNLFTINRETGVISLIGTGLDREKFPE-YTL 344 (880)
T ss_dssp EEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC--CSCSCSEEECTTTCEEEECSCCCCTTTCCE-EEE
T ss_pred EEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCC--cccCCeEEEccCCccEEEecccCCHHHcce-eEE
Confidence 35789999999988877776554 2 357777765332210 0145799999999999996 7899999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCC--CCCCceEEEEEeeC
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMD--KGDYGKLNYSIISA 163 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D--~g~n~~i~Y~i~~~ 163 (303)
.|+|+|+|. ++++++++|.|.|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+| .|.|+.++|+|..
T Consensus 345 ~V~A~D~g~----~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~- 418 (880)
T 1q55_A 345 TVQATDLEG----AGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV- 418 (880)
T ss_dssp EEEEEHHHH----TSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-
T ss_pred EEEEEECCC----CCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-
Confidence 999999986 68899999999999999999999999999999999 999999999999999 6789999999987
Q ss_pred CCCCCcccCCCcCcEEEE--C--CCcEEEEcccCcccccceEEEEEEEEEE---------------Eeecc---------
Q psy8640 164 AASGYTDVDDSWKLFRVD--A--LTGLVTTNAVFDYEARSRYAFTLLSTYS---------------VWTRS--------- 215 (303)
Q Consensus 164 ~~~~~~~~~~~~~~F~Id--~--~tG~I~~~~~LD~e~~~~~~l~v~a~~~---------------~~~~~--------- 215 (303)
+.. +.|.|+ + .+|.|++.++||||....|.|+|.|.+. +....
T Consensus 419 ~~~---------~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND~P~f~~ 489 (880)
T 1q55_A 419 NEG---------GFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNEAPFFVP 489 (880)
T ss_dssp CTT---------SCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCCCCEESS
T ss_pred CCC---------ceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCCCCEEec
Confidence 432 789995 3 6799999999999999999999998741 11111
Q ss_pred ------cccCCC--------------------ceEEEee-----------cC-----ceeeeeee----cEEEEEEEEEE
Q psy8640 216 ------LVWSRP--------------------MQCLIMR-----------RG-----VVFDYEAR----SRYAFTLLSTD 249 (303)
Q Consensus 216 ------~~~~~~--------------------~~~~i~~-----------~~-----~~lD~E~~----~~y~l~V~a~D 249 (303)
+.++.+ +.+.|.. +| +.||||.. ..|.|+|.|+|
T Consensus 490 ~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D 569 (880)
T 1q55_A 490 AVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTD 569 (880)
T ss_dssp CEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEE
T ss_pred CceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEE
Confidence 222222 2222211 12 46999997 89999999999
Q ss_pred CCC--CeEEEEEEEEEeecCCCCCeeCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 250 SGG--RTCKVKVRVEIESRDEFHPQFTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 250 ~g~--~s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
.|. ++++++|+|+|.|+|||+|.|.+. ... .|++ |.|+ + |+|+|+|+
T Consensus 570 ~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~--~~g~-v--v~A~D~D~ 619 (880)
T 1q55_A 570 DGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQN--PEPQ-V--LTISDADI 619 (880)
T ss_dssp CSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSS--CCCE-E--EEBCCSSC
T ss_pred CCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCC--CCCe-E--EEEecCCC
Confidence 886 488899999999999999999865 444 6887 5887 3 99999995
No 18
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.3e-34 Score=250.40 Aligned_cols=194 Identities=22% Similarity=0.242 Sum_probs=163.4
Q ss_pred eeEecceeEeeccccccc--cceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 7 VWLQPMQCLIMRRGVVHR--ENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
.|+- -++.|.||.+.+. ...+.. .. ...|...| ++..++..++|.|++.||.|++.++||||.... |.
T Consensus 1 ~wv~-~~~~V~En~~~~~~~~v~~v~-~D-~D~g~~~Y------~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~ 70 (203)
T 3ppe_A 1 DWIW-NRMHIREEIDSPLPHHVGKLT-SS-VGNKNAMY------IIEGESANTIFKVQGYDGDIYAFERLDREKKAE-YE 70 (203)
T ss_dssp CBCC-SEEEEETTCCSSSCEEEEECC-BC-CCCTTEEE------EEEETTBTTTEEEETTTTEEEESSCCCTTTCCE-EE
T ss_pred Ccee-ccEEEEccCCCCCCEEEEEEE-ec-CCCCCcEE------EEecCCCCCeEEEECCcCEEEECccccccccce-EE
Confidence 3776 5699999998652 222221 11 11122244 344555667999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCC---CCCCceEEEEEe
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMD---KGDYGKLNYSII 161 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D---~g~n~~i~Y~i~ 161 (303)
|+|.|+|+|.+ +++++.+.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| .|.|++++|+|.
T Consensus 71 l~v~a~D~g~~---~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~ 147 (203)
T 3ppe_A 71 LTAHIIDRRNN---RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQII 147 (203)
T ss_dssp EEEEEEETTTT---EECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEE
T ss_pred EEEEEEECCCC---CcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEe
Confidence 99999999862 367889999999999999999999999999999999999999999999999 478999999999
Q ss_pred eCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecE
Q psy8640 162 SAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240 (303)
Q Consensus 162 ~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~ 240 (303)
.+. +.|.|+ .+|.|++. ++||||....
T Consensus 148 ~~~-----------~~F~I~-~tG~i~~~~~~LD~E~~~~---------------------------------------- 175 (203)
T 3ppe_A 148 KGN-----------EYFTVD-DSGVIFTARADLDRESQSA---------------------------------------- 175 (203)
T ss_dssp EST-----------TTEEEC-TTSEEEESCSCCCTTTCSE----------------------------------------
T ss_pred CCC-----------CcEEEe-CCeEEEECCcCCCcccCCE----------------------------------------
Confidence 876 689999 99999999 9999999998
Q ss_pred EEEEEEEEECCC---CeEEEEEEEEEee
Q psy8640 241 YAFTLLSTDSGG---RTCKVKVRVEIES 265 (303)
Q Consensus 241 y~l~V~a~D~g~---~s~~~~v~I~V~D 265 (303)
|.|.|.|+|.++ ++++++|+|+|+|
T Consensus 176 y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 176 YEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 999999999844 4889999999987
No 19
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=9.9e-35 Score=251.79 Aligned_cols=195 Identities=24% Similarity=0.339 Sum_probs=155.6
Q ss_pred eEecceeEeeccccccccceEEEEEEecc---cCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 8 WLQPMQCLIMRRGVVHRENIQVYLVWYGS---TSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 8 ~~~p~~~~i~e~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
|+. -++.|+||.+.+.. .....+.... ++.+.|+ +...+..++|.|++.+|.|++.++||||.... |.
T Consensus 2 wi~-~~~~v~En~~~~~~-~~v~~~a~D~D~g~~~i~Y~------l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~ 72 (207)
T 3lnd_A 2 WMA-NQFFLLEEYTGSDY-QYVGKLHSDQDRGDGSLKYI------LSGDGAGDLFIINENTGDIQATKRLDREEKPV-YI 72 (207)
T ss_dssp ----CCEEEESCBCSSSC-EEEEECCCTTCCSSTTBCCC------CCSSSBTTTEEECTTTCEEEECSCCCGGGCCE-EE
T ss_pred ccc-cccEEEeecCCCCC-EEEEEEEeCCCCCCceEEEE------EECCCCCCeEEEECCceEEEECCCcCcccCCE-EE
Confidence 665 56889999884331 1122222210 2444452 33334446999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCceEEEEEe
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDK---GDYGKLNYSII 161 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~---g~n~~i~Y~i~ 161 (303)
|.|.|+|++. .+++++.+.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|.
T Consensus 73 l~v~a~D~~~---~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~ 149 (207)
T 3lnd_A 73 LRAQAVNRRT---GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSIL 149 (207)
T ss_dssp C----CBSSS---CCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEE
T ss_pred EEEEEEECCC---CCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEc
Confidence 9999999874 15688889999999999999999999999999999999999999999999998 78999999999
Q ss_pred eCCCCCCcccCCCcCcEEEECCCcEEEEc-ccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecE
Q psy8640 162 SAAASGYTDVDDSWKLFRVDALTGLVTTN-AVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSR 240 (303)
Q Consensus 162 ~~~~~~~~~~~~~~~~F~Id~~tG~I~~~-~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~ 240 (303)
.+. +.|.|++.+|.|++. ++||||....
T Consensus 150 ~~~-----------~~F~Id~~tG~i~~~~~~lD~E~~~~---------------------------------------- 178 (207)
T 3lnd_A 150 QGQ-----------PYFSVESETGIIKTALLNMDRENREQ---------------------------------------- 178 (207)
T ss_dssp ESG-----------GGEEECTTTCEEEECCSSCCC--CCE----------------------------------------
T ss_pred CCC-----------CCEEEcCCCcEEEECcccCCcccCCE----------------------------------------
Confidence 876 689999999999999 8999999888
Q ss_pred EEEEEEEEECCC----CeEEEEEEEEEee
Q psy8640 241 YAFTLLSTDSGG----RTCKVKVRVEIES 265 (303)
Q Consensus 241 y~l~V~a~D~g~----~s~~~~v~I~V~D 265 (303)
|.|.|.|+|.|+ ++++++|+|+|.|
T Consensus 179 y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 179 YQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 999999999873 5889999999987
No 20
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.9e-33 Score=258.75 Aligned_cols=206 Identities=16% Similarity=0.255 Sum_probs=166.8
Q ss_pred ceeeEec---ceeEeeccccccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCc
Q psy8640 5 SLVWLQP---MQCLIMRRGVVHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSS 81 (303)
Q Consensus 5 ~~~~~~p---~~~~i~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~ 81 (303)
...|.++ ..+.|+||.++|....+..+..-.....+.|. +..++..++|.|++.+|.|++.++||||....
T Consensus 103 ~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~------i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~ 176 (316)
T 3ubf_A 103 PPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYF------IVRDRTGGRFEVDERSGVVRTRGTDLFQLDME 176 (316)
T ss_dssp CCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEE------EEEEESSSCEEECTTTCEEEECSSCCCCTTCE
T ss_pred CCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEE------EEeCCCCCEEEEECCccEEEECCcCCcccCcE
Confidence 3445543 46789999999888777776554332335554 33345668999999999999999999999999
Q ss_pred eEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEe
Q psy8640 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSII 161 (303)
Q Consensus 82 ~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~ 161 (303)
|.|.|.|+|+|.+...+++++++.+.|.|.| |||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| |+.++|+|.
T Consensus 177 -y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~ 251 (316)
T 3ubf_A 177 -YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLK 251 (316)
T ss_dssp -EEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEE
T ss_pred -EEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEE
Confidence 9999999998742112467888999999999 99999999999999999999999999999999998 678999998
Q ss_pred -eCCCCCCcccCCCcCcEEEECCCcEEEEcccCccccc---ceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeee
Q psy8640 162 -SAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR---SRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEA 237 (303)
Q Consensus 162 -~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~---~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~ 237 (303)
.++.. +.|.|++.+|.|++.++||||.. ..
T Consensus 252 ~~~~~~---------~~F~Id~~tG~i~~~~~LD~E~~~~~~~------------------------------------- 285 (316)
T 3ubf_A 252 AQGQGA---------GTFNIGPTSGIVKLAKELDFEDLRQPHV------------------------------------- 285 (316)
T ss_dssp EESSCT---------TTEEECTTTCEEEECSCCCSSCTTSCSE-------------------------------------
T ss_pred cCCCCC---------CeEEEECCeEEEEECCcCCccccCCCce-------------------------------------
Confidence 34322 78999999999999999999997 56
Q ss_pred ecEEEEEEEEE-ECCCCeEEEEEEEEEeecCCCC
Q psy8640 238 RSRYAFTLLST-DSGGRTCKVKVRVEIESRDEFH 270 (303)
Q Consensus 238 ~~~y~l~V~a~-D~g~~s~~~~v~I~V~DvNdn~ 270 (303)
|.|+|.|+ |.|+++++++|+|.|+|+||||
T Consensus 286 ---y~l~V~A~dd~g~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 286 ---YSLIVTATEDSGGFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp ---EEEEEEEEESSSSCEEEEEEEEEEECC----
T ss_pred ---EEEEEEEEECCCCCEEEEEEEEEEEecCCCC
Confidence 99999999 6677899999999999999986
No 21
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=3.8e-32 Score=250.57 Aligned_cols=193 Identities=22% Similarity=0.365 Sum_probs=162.4
Q ss_pred ceeEeeccccccccceEEEEEEe-----cccCceeeeecccccccCCCCcccEEEeCCccEEEEc-ccCCCCCCCceEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWY-----GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQ-QPLDYDTGSSEHLL 85 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LD~E~~~~~~~l 85 (303)
....|+||.++|+...+..+..- |.++++.|+.. ....+|.|++.+|.|+++ ++||||.... |.|
T Consensus 111 y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~--------~~~~~F~Id~~tG~i~~~~~~LD~E~~~~-y~l 181 (322)
T 2a62_A 111 YHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSIL--------EGQPYFSIEPETAIIKTALPNMDREAKEE-YLV 181 (322)
T ss_dssp EEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEE--------ECTTTEEECTTTCCEEECSSCCCGGGCSE-EEE
T ss_pred eEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEc--------cCCCCEEEecCCCEEEecccCCCcccCCe-EEE
Confidence 45789999998887766555432 34556666542 223689999999999999 8999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCC
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA 165 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~ 165 (303)
.|.|+|+|.+. ++++++++|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..++.
T Consensus 182 ~V~a~D~g~p~--~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~ 259 (322)
T 2a62_A 182 VIQAKDMGGHS--GGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDG 259 (322)
T ss_dssp EEEEEESCSSS--SCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---C
T ss_pred EEEEEECCCCC--CCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCC
Confidence 99999998621 2489999999999999999999999999999999999999999999999999999999999988653
Q ss_pred CCCcccCCCcCcEEEE----CCCcEEEEcccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEE
Q psy8640 166 SGYTDVDDSWKLFRVD----ALTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRY 241 (303)
Q Consensus 166 ~~~~~~~~~~~~F~Id----~~tG~I~~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y 241 (303)
. +.|.|+ +.+|.|++.++||||.... |
T Consensus 260 ~---------~~F~I~~d~~~~tG~i~~~~~LD~E~~~~----------------------------------------y 290 (322)
T 2a62_A 260 T---------ALFEITSDAQAQDGVIRLRKPLDFETKKS----------------------------------------Y 290 (322)
T ss_dssp C---------SSBCCBCCTTTSEEEEEBCSCCCCSSCCE----------------------------------------E
T ss_pred C---------CcEEEeccCCCceEEEEECCcCCcccCCe----------------------------------------E
Confidence 3 789998 4689999999999999988 9
Q ss_pred EEEEEEEECCCC---------eEEEEEEEEEe
Q psy8640 242 AFTLLSTDSGGR---------TCKVKVRVEIE 264 (303)
Q Consensus 242 ~l~V~a~D~g~~---------s~~~~v~I~V~ 264 (303)
.|+|.|+|.|.+ +++++|+|.|.
T Consensus 291 ~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 291 TLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp EEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred EEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 999999998753 56788888874
No 22
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.97 E-value=1.8e-29 Score=240.60 Aligned_cols=188 Identities=24% Similarity=0.413 Sum_probs=160.3
Q ss_pred ceeEeeccccccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCC---ceEEEEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGS---SEHLLILK 88 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~---~~~~l~i~ 88 (303)
....|+||.+.|....+..+..- .++.+.|... ..++..++|.|++.+|.|++.++||||... . |.|.|.
T Consensus 224 y~~~v~En~~~gt~v~~v~A~D~-dn~~i~Ysi~-----~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~-y~l~V~ 296 (419)
T 3ubh_A 224 YEAEIPENQKKDSDIISIKAKSF-ADREIRYTLK-----AQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV-YSLIVT 296 (419)
T ss_dssp EEEEEETTCCTTCEEEECCEECS-SCCCCEEEEE-----ESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSE-EEEEEE
T ss_pred eEEEecCCCCCCcEEEEEEEecC-CCCceEEEEe-----cCCCCCCcEEEECCCCEEEECcccCccccccccE-EEEEEE
Confidence 34689999999888776666442 3566677431 134566899999999999999999999875 6 999999
Q ss_pred EEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEE-EEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCC
Q psy8640 89 VEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLE-FVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASG 167 (303)
Q Consensus 89 a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~-~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~ 167 (303)
|+|.+ +++++++.|.|.|.|+|||+|.|....|.. .|.|+.++|+.|++|.|+|+|.|.|+.++|+|..
T Consensus 297 a~dd~-----~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~----- 366 (419)
T 3ubh_A 297 ATEDS-----GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD----- 366 (419)
T ss_dssp EECTT-----TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC-----
T ss_pred EEeCC-----CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC-----
Confidence 99754 368899999999999999999999999987 7999999999999999999999999999999964
Q ss_pred CcccCCCcCcEEEECCCcEEEEcccCcccc-cceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEE
Q psy8640 168 YTDVDDSWKLFRVDALTGLVTTNAVFDYEA-RSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLL 246 (303)
Q Consensus 168 ~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~-~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~ 246 (303)
+.|.|++ +|.|++.++||||. ... |.|.|.
T Consensus 367 --------~~F~Id~-~G~i~~~~~ld~E~~~~~----------------------------------------y~l~V~ 397 (419)
T 3ubh_A 367 --------DHFAVDS-NGIIVNNKQLDADNNNAY----------------------------------------YEFIVT 397 (419)
T ss_dssp --------TTEEECT-TCEEEECSCSSSSCTTCE----------------------------------------EEEEEE
T ss_pred --------CcEEECC-CeEEEECcccCcccCCce----------------------------------------EEEEEE
Confidence 5699998 89999999999998 466 999999
Q ss_pred EEECCCC--eEEEEEEEEEee
Q psy8640 247 STDSGGR--TCKVKVRVEIES 265 (303)
Q Consensus 247 a~D~g~~--s~~~~v~I~V~D 265 (303)
|+|.|.| +++++|+|.|.|
T Consensus 398 a~D~G~p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 398 AKDKGEPPKSGVATVRVYTKN 418 (419)
T ss_dssp EEECCSSCCEEEEEEEEEEEC
T ss_pred EEECCcCCceeEEEEEEEEec
Confidence 9999986 666777777765
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.96 E-value=2.5e-29 Score=222.63 Aligned_cols=197 Identities=23% Similarity=0.317 Sum_probs=151.9
Q ss_pred eEeeccccccccceEEEEEE---ecccCceeeeecccccccCCCCcccEEEeCCccEEEEc---ccCCCCCCCceEEEEE
Q psy8640 14 CLIMRRGVVHRENIQVYLVW---YGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQ---QPLDYDTGSSEHLLIL 87 (303)
Q Consensus 14 ~~i~e~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~---~~LD~E~~~~~~~l~i 87 (303)
..|.|+++.|+.......+. .+.++.+.|... ++...+|.|++.+|.+++. +.||||.... |.+.+
T Consensus 24 vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~-------~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~-~~~~~ 95 (242)
T 4apx_B 24 VAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLK-------DNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMN-IHSIV 95 (242)
T ss_dssp EEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEE-------SCGGGCEEEETTTTEEEECCTTSCCCCSTTTC-CCEEE
T ss_pred EEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEe-------cCCCceEEECCCCCEEEEEecCCceeccCCCc-eEEEE
Confidence 46888888777543222211 123333444321 2345689999999999985 6799999877 76655
Q ss_pred EEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEE-----EEEEeCCCCCCceEEEEEee
Q psy8640 88 KVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFT-----ARATDMDKGDYGKLNYSIIS 162 (303)
Q Consensus 88 ~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~-----v~A~D~D~g~n~~i~Y~i~~ 162 (303)
.+.+++.+ ..+....+.|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++ +.|+|+|.|.|++++|+|..
T Consensus 96 ~~v~~~~~--~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~ 173 (242)
T 4apx_B 96 VQVQCVNK--KVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQY 173 (242)
T ss_dssp EEEEEEET--TTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEEC
T ss_pred EEEEeECC--CCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEec
Confidence 55543321 135667788999999999999999999999999999999999976 78999999999999999998
Q ss_pred CCCCCCcccCCCcCcEEEEC-CCcEEEEcccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEE
Q psy8640 163 AAASGYTDVDDSWKLFRVDA-LTGLVTTNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRY 241 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~F~Id~-~tG~I~~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y 241 (303)
+... ....+.|.||+ .||.|+++++||||.... |
T Consensus 174 ~~~~-----~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~----------------------------------------y 208 (242)
T 4apx_B 174 NPED-----PTSNDTFEIPLMLTGNVVLRKRLNYEDKTR----------------------------------------Y 208 (242)
T ss_dssp CTTS-----TTHHHHEECSSTTTCCEEECSCCCTTTCCE----------------------------------------E
T ss_pred CCCC-----cccccceEEcCCCceEEEECCcCChhhCCE----------------------------------------E
Confidence 7542 12235799995 599999999999999988 9
Q ss_pred EEEEEEEECCCC-----eEEEEEEEEEee
Q psy8640 242 AFTLLSTDSGGR-----TCKVKVRVEIES 265 (303)
Q Consensus 242 ~l~V~a~D~g~~-----s~~~~v~I~V~D 265 (303)
.|.|.|+|.|++ ++.+.|+|.|+-
T Consensus 209 ~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 209 YVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp EEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred EEEEEEEECCcCchhcccCCceEEEEEee
Confidence 999999999874 567888888864
No 24
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=198.04 Aligned_cols=116 Identities=28% Similarity=0.450 Sum_probs=106.8
Q ss_pred EEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEE
Q psy8640 109 ITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVT 188 (303)
Q Consensus 109 I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~ 188 (303)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|++++|+|..+.. ....+|.||+.||.|+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~-------~~~~~F~Id~~tG~I~ 74 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATE-------SVRRLLRLDETSGWLS 74 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCT-------THHHHEEECTTTCEEE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCC-------ccccEEEEeCCceEEE
Confidence 468999999999999999999999999999999999999999999999999988641 1226899999999999
Q ss_pred EcccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeec
Q psy8640 189 TNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESR 266 (303)
Q Consensus 189 ~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~Dv 266 (303)
++++||||.... |.|.|.|+|.|.+ +++++|+|.|.|+
T Consensus 75 ~~~~LD~E~~~~----------------------------------------y~l~V~A~D~g~p~~s~~~~v~I~V~Dv 114 (119)
T 2yst_A 75 VLHRIDREEVNQ----------------------------------------LRFTVMARDRGQPPKTDKATVVLNIKDE 114 (119)
T ss_dssp ECSCCCTTTCSE----------------------------------------EEEEEEECCSBTTBCCEEEEEEEEEECS
T ss_pred ECccCCcccCCE----------------------------------------EEEEEEEEECCCCCcEEEEEEEEEEEec
Confidence 999999999988 9999999998874 6899999999999
Q ss_pred CCCCC
Q psy8640 267 DEFHP 271 (303)
Q Consensus 267 Ndn~P 271 (303)
|||+|
T Consensus 115 NDn~P 119 (119)
T 2yst_A 115 NDNVP 119 (119)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 99998
No 25
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=187.00 Aligned_cols=113 Identities=27% Similarity=0.410 Sum_probs=103.4
Q ss_pred EEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEE
Q psy8640 109 ITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVT 188 (303)
Q Consensus 109 I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~ 188 (303)
|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|++++|+|....+ .....+|.||+.||.|+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~------~~~~~~F~Id~~tG~I~ 75 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVA------PATKRLFALNNTTGLIT 75 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCC------HHHHHHEEECTTTCEEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCC------CCccceEEEeCCeeEEE
Confidence 468999999999999999999999999999999999999999999999999986321 11227899999999999
Q ss_pred EcccCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCCeEEEEEEEEEeecC
Q psy8640 189 TNAVFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRD 267 (303)
Q Consensus 189 ~~~~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~s~~~~v~I~V~DvN 267 (303)
++++||||.... |.|.|.|+|.|+++++++|+|.|+|+|
T Consensus 76 ~~~~LD~E~~~~----------------------------------------y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 76 VQRSLDREETAI----------------------------------------HKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp ECSCCCTTTCSE----------------------------------------EEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred ECccCCcccCcE----------------------------------------EEEEEEEEECCCCceEEEEEEEEEECC
Confidence 999999999988 999999999998889999999999998
No 26
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.94 E-value=1.2e-26 Score=201.31 Aligned_cols=133 Identities=25% Similarity=0.376 Sum_probs=121.3
Q ss_pred CCCCcCCCCceE--EEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccC
Q psy8640 116 DNAPKFPITEYL--EFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193 (303)
Q Consensus 116 Dn~P~f~~~~~~--~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~L 193 (303)
|++|.|.+..|. +.|+|++++|+.|+++.|+|+|. +.+.|+|..+... ++|.|++.+|.|++.++|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~---------~~F~Id~~tG~i~~~~~L 70 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEAS---------RFFAVEPDTGVVWLRQPL 70 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHH---------HHEEECTTTCEEEESSCC
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCC---------CcEEEeCCCCEEEECCcc
Confidence 569999999997 79999999999999999999995 4689999875432 789999999999999999
Q ss_pred cccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCCeEEEEEEEEEeecCCCCCee
Q psy8640 194 DYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQF 273 (303)
Q Consensus 194 D~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~s~~~~v~I~V~DvNdn~P~F 273 (303)
|||.... |.|.|.|+|.++. .++.++|.|.|+|||+|.|
T Consensus 71 D~E~~~~----------------------------------------y~l~v~a~D~~~~-~~~~v~I~V~DvNDn~P~f 109 (210)
T 3mvs_A 71 DRETKSE----------------------------------------FTVEFSVSDHQGV-ITRKVNIQVGDVNDNAPTF 109 (210)
T ss_dssp CTTTCCE----------------------------------------EEEEEEEECSSCE-EEEEEEEEEECCCCCCCEE
T ss_pred CCcccce----------------------------------------EEEEEEEEeCCCC-EEEEEEEEEEeCCCCCCcC
Confidence 9999988 9999999997654 6789999999999999999
Q ss_pred CCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 274 TERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 274 ~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
.+..|.+. +|++ |.|+.|++|+|+|+|+
T Consensus 110 ~~~~y~~~v~E~~--~~gt~v~~v~A~D~D~ 138 (210)
T 3mvs_A 110 HNQPYSVRIPENT--PVGTPIFIVNATDPDL 138 (210)
T ss_dssp CSCSEEEEEETTC--CTTCEEEECCEECCSS
T ss_pred CCceEEEEEECCC--CCCCEEEEEEEEeCCC
Confidence 99999999 9999 6999999999999994
No 27
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.92 E-value=1.8e-24 Score=188.24 Aligned_cols=126 Identities=20% Similarity=0.260 Sum_probs=113.8
Q ss_pred ceEEEEeCCC--CCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEE
Q psy8640 125 EYLEFVGENE--PIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYA 202 (303)
Q Consensus 125 ~~~~~V~E~~--~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~ 202 (303)
.+.+.|.|+. +.|+.|+++ |+|+|.| |+.++|+|.++... ..|.||+.+|.|++.++||||....
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~---------~~F~Id~~tG~i~~~~~LDrE~~~~-- 71 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAG---------TIFVIDDKSGNIHATKTLDREERAQ-- 71 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBT---------TTEEECTTTCEEEECSCCCTTTCSE--
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCC---------CeEEEECCceEEEECCccCCccCCE--
Confidence 3689999994 579999988 8999998 78999999876432 6899999999999999999999988
Q ss_pred EEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC---CeEEEEEEEEEeecCCCCCeeCCCeeE
Q psy8640 203 FTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG---RTCKVKVRVEIESRDEFHPQFTERTFK 279 (303)
Q Consensus 203 l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~---~s~~~~v~I~V~DvNdn~P~F~~~~y~ 279 (303)
|.|.|.|+|.|+ +++++.|+|.|.|+|||+|.|.+..|.
T Consensus 72 --------------------------------------y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~ 113 (215)
T 2a4e_A 72 --------------------------------------YTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYH 113 (215)
T ss_dssp --------------------------------------EEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEE
T ss_pred --------------------------------------EEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceE
Confidence 999999999875 377899999999999999999999999
Q ss_pred EE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 280 FI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 280 ~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
+. +|++ |.|+.|++|+|+|+|.
T Consensus 114 ~~v~E~~--~~Gt~v~~v~A~D~D~ 136 (215)
T 2a4e_A 114 ANVPERS--NVGTSVIQVTASDADD 136 (215)
T ss_dssp EEEETTC--CTTCEEEECCEECSSC
T ss_pred EEEECCC--CCCCEEEEEEEEECCC
Confidence 99 9999 6999999999999993
No 28
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.92 E-value=1.2e-24 Score=189.35 Aligned_cols=129 Identities=16% Similarity=0.236 Sum_probs=116.3
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEEEE
Q psy8640 127 LEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFTLL 206 (303)
Q Consensus 127 ~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~v~ 206 (303)
.+.|+||++ |+.++++.|.|.|.+.|+.++|+|.++... .+..+.|.||+.+|.|++.++||||....
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~------ 73 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGAD-----QPPTGIFIINPISGQLSVTKPLDRELIAR------ 73 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSS-----STTCSSEEECTTTCEEEECSCCCTTTCSE------
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCC-----CCCCCcEEEeCCccEEEECcccCcccCCe------
Confidence 679999998 888889999999999999999999976421 12237899999999999999999999988
Q ss_pred EEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeecCCCCCeeCCCeeEEE-ec
Q psy8640 207 STYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESRDEFHPQFTERTFKFI-LS 283 (303)
Q Consensus 207 a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~DvNdn~P~F~~~~y~~~-~e 283 (303)
|.|.|.|+|.|++ ++++.|+|.|.|+|||+|.|.+..|.+. +|
T Consensus 74 ----------------------------------y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E 119 (215)
T 2qvi_A 74 ----------------------------------FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPE 119 (215)
T ss_dssp ----------------------------------EEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECS
T ss_pred ----------------------------------EEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeC
Confidence 9999999998874 6789999999999999999999999999 99
Q ss_pred CCCCCCCcEEEEEEEEeCCC
Q psy8640 284 GTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 284 ~~~~p~gt~v~~v~A~D~D~ 303 (303)
++ |.|+.|++|+|+|+|.
T Consensus 120 n~--~~gt~v~~v~A~D~D~ 137 (215)
T 2qvi_A 120 GS--KPGTYVMTVTAIDADD 137 (215)
T ss_dssp SC--CTTCEEEECCCBCSSC
T ss_pred CC--CCCCEEEEEEEEeCCC
Confidence 99 6999999999999994
No 29
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.91 E-value=9.5e-24 Score=183.37 Aligned_cols=128 Identities=20% Similarity=0.273 Sum_probs=113.6
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEE
Q psy8640 126 YLEFVGENEP--IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203 (303)
Q Consensus 126 ~~~~V~E~~~--~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l 203 (303)
..++|+||.+ .|+.|+++.| |.|. |+.++|+|.+.... .+..++|.|++.||.|++.++||||....
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~--- 73 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGAD-----KPPVGVFIIERETGWLKVTQPLDREAIAK--- 73 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCSE---
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCC-----CCCCCeEEEECCCCEEEECCccCcccCce---
Confidence 3789999998 6788999999 7775 88999999985432 22336899999999999999999999998
Q ss_pred EEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC--CeEEEEEEEEEeecCCCCCeeCCCeeEEE
Q psy8640 204 TLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG--RTCKVKVRVEIESRDEFHPQFTERTFKFI 281 (303)
Q Consensus 204 ~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~--~s~~~~v~I~V~DvNdn~P~F~~~~y~~~ 281 (303)
|.|.|.|+|.|+ +++++.|+|.|.|+|||+|.|.+..|.+.
T Consensus 74 -------------------------------------y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~ 116 (213)
T 3qrb_A 74 -------------------------------------YILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGS 116 (213)
T ss_dssp -------------------------------------EEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEE
T ss_pred -------------------------------------EEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEE
Confidence 999999999887 46789999999999999999999999999
Q ss_pred -ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 282 -LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 282 -~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
.|++ |.|+.|++|+|+|+|.
T Consensus 117 v~En~--~~gt~v~~v~A~D~D~ 137 (213)
T 3qrb_A 117 VAEGA--VPGTSVMKVSATDADD 137 (213)
T ss_dssp EETTC--CTTCEEEECCEECCSC
T ss_pred EECCC--CCCcEEEEEEEEeCCC
Confidence 9999 6999999999999994
No 30
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.90 E-value=2.3e-23 Score=179.70 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=112.2
Q ss_pred eEEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEE
Q psy8640 126 YLEFVGENEPIG--SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203 (303)
Q Consensus 126 ~~~~V~E~~~~g--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l 203 (303)
..+.|+||.+.| ..|+++. +|+|.|.+ +|+|.++++. ++|.|++.||.|++.++||||....
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~---------~~F~Id~~tG~i~~~~~LDrE~~~~--- 68 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESAN---------TIFKVQGYDGDIYAFERLDREKKAE--- 68 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBT---------TTEEEETTTTEEEESSCCCTTTCCE---
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCC---------CeEEEECCcCEEEECccccccccce---
Confidence 468999999988 8889998 99999876 9999987643 6899999999999999999999998
Q ss_pred EEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC---CeEEEEEEEEEeecCCCCCeeCCCeeEE
Q psy8640 204 TLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG---RTCKVKVRVEIESRDEFHPQFTERTFKF 280 (303)
Q Consensus 204 ~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~---~s~~~~v~I~V~DvNdn~P~F~~~~y~~ 280 (303)
|.|+|.|+|.|. .++++.|+|.|.|+|||+|.|.+..|.+
T Consensus 69 -------------------------------------y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~ 111 (203)
T 3ppe_A 69 -------------------------------------YELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNG 111 (203)
T ss_dssp -------------------------------------EEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEE
T ss_pred -------------------------------------EEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEE
Confidence 999999999886 3678999999999999999999999999
Q ss_pred E-ecCCCCCCCcEEEEEEEEeCC
Q psy8640 281 I-LSGTDLPVGYVVGHLRLVRFR 302 (303)
Q Consensus 281 ~-~e~~~~p~gt~v~~v~A~D~D 302 (303)
. +|++ |.|+.|++|+|+|+|
T Consensus 112 ~v~E~~--~~gt~v~~v~A~D~D 132 (203)
T 3ppe_A 112 SVPEMS--RLGTSVTKVTAEDAD 132 (203)
T ss_dssp EEETTC--CTTCEEEECCEECCS
T ss_pred EEeccC--CCCcEEEEEEEEcCC
Confidence 9 9999 699999999999999
No 31
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.90 E-value=1.5e-23 Score=182.71 Aligned_cols=126 Identities=20% Similarity=0.297 Sum_probs=112.7
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEE
Q psy8640 127 LEFVGENEPIG--SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204 (303)
Q Consensus 127 ~~~V~E~~~~g--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~ 204 (303)
.+.|+||.+.| ..++++.|+|+|. .++|+|...... .+..+.|.|++.+|.|++.++||||....
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~---- 73 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVD-----QDPKGTFRINENTGSVSVTRTLDRETIAT---- 73 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCSE----
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCC-----CCCCCeEEEeCCceEEEECCcCCcccCCE----
Confidence 68999999988 8899999998775 699999875322 23347899999999999999999999998
Q ss_pred EEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeecCCCCCeeCCCeeEEE-
Q psy8640 205 LLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESRDEFHPQFTERTFKFI- 281 (303)
Q Consensus 205 v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~DvNdn~P~F~~~~y~~~- 281 (303)
|.|+|.|+|.|++ ++++.|+|.|.|+|||+|.|.+..|.+.
T Consensus 74 ------------------------------------y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v 117 (218)
T 3k5r_A 74 ------------------------------------YQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHV 117 (218)
T ss_dssp ------------------------------------EEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEE
T ss_pred ------------------------------------EEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEE
Confidence 9999999998875 6889999999999999999999999999
Q ss_pred ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 282 LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 282 ~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
.|++ |.|+.|++|+|+|+|.
T Consensus 118 ~E~~--~~gt~v~~v~A~D~D~ 137 (218)
T 3k5r_A 118 MEGS--PTGTTVMRMTAFDADD 137 (218)
T ss_dssp ETTC--CTTCEEEECCCSCSSS
T ss_pred ECCC--CCCCEEEEEEEEeCCC
Confidence 9999 6999999999999994
No 32
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.3e-25 Score=197.80 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=113.6
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCC--CceEE------EEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcc
Q psy8640 120 KFPITEYLEFVGENEPIGSSVFTARATDMDKGD--YGKLN------YSIISAAASGYTDVDDSWKLFRVDALTGLVTTNA 191 (303)
Q Consensus 120 ~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~--n~~i~------Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~ 191 (303)
.|.+..|.+.|+|++++|+.|++|.|+|+|.|. +.+|. |++..+.. ++|.||+.||.|++++
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~----------~~F~Id~~tG~i~~~~ 71 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHEN----------NWIRIQEDTGLLYLQR 71 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEEC----------CSEEECTTTCEEEESS
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCC----------CEEEECCCcEEEEECC
Confidence 588999999999999999999999999999864 45554 55544321 7899999999999999
Q ss_pred cCcccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEE------------EEEEEEEECCCC----eE
Q psy8640 192 VFDYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRY------------AFTLLSTDSGGR----TC 255 (303)
Q Consensus 192 ~LD~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y------------~l~V~a~D~g~~----s~ 255 (303)
+||||.... | .|+|.|+|.|.+ ++
T Consensus 72 ~LDrE~~~~----------------------------------------y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~ 111 (246)
T 2x2u_A 72 SLDHSSWEK----------------------------------------LSVRNRGFPLLTVYLKVFLSPTSLREGECQW 111 (246)
T ss_dssp CBCHHHHHH----------------------------------------HHHTSTTSCCCEEEEEEECC-------CCCT
T ss_pred cCChhHhhh----------------------------------------hccccCCCcccceEEEEEEEcCCCCCCcccc
Confidence 999999888 8 999999998864 66
Q ss_pred EEEEEEEEeecCCCCCe----------eCCCeeEEE-ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 256 KVKVRVEIESRDEFHPQ----------FTERTFKFI-LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 256 ~~~v~I~V~DvNdn~P~----------F~~~~y~~~-~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
+++|+|.|.|+|||+|+ |.+..|.+. +|++ |.|+.|++|+|+|+|+
T Consensus 112 ~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~--~~Gt~v~~v~A~D~D~ 168 (246)
T 2x2u_A 112 PGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENR--PPGTFHQFRLLPVQFL 168 (246)
T ss_dssp TTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTS--CCCEEEECSCHHHHHH
T ss_pred eEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCC--CCCcEEEEEEEEcCCC
Confidence 78999999999999999 999999999 9999 6999999999999983
No 33
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.90 E-value=2.9e-24 Score=185.83 Aligned_cols=124 Identities=19% Similarity=0.237 Sum_probs=107.4
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEE
Q psy8640 127 LEFVGENEPIG--SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204 (303)
Q Consensus 127 ~~~V~E~~~~g--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~ 204 (303)
.+.|.||.+.+ ..|+++ |+|+|.| ++.+.|+|.++... +.|.|++.+|.|++.++||||....
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~---------~~F~Id~~tG~i~~~~~LDrE~~~~---- 70 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAG---------DLFIINENTGDIQATKRLDREEKPV---- 70 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBT---------TTEEECTTTCEEEECSCCCGGGCCE----
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCC---------CeEEEECCceEEEECCCcCcccCCE----
Confidence 57899998855 588888 8999998 67899999876532 5899999999999999999999998
Q ss_pred EEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC---CeEEEEEEEEEeecCCCCCeeCCCeeEEE
Q psy8640 205 LLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG---RTCKVKVRVEIESRDEFHPQFTERTFKFI 281 (303)
Q Consensus 205 v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~---~s~~~~v~I~V~DvNdn~P~F~~~~y~~~ 281 (303)
|.|.|.|+|.|+ .++++.|+|.|.|+|||+|.|.+..|.+.
T Consensus 71 ------------------------------------y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~ 114 (207)
T 3lnd_A 71 ------------------------------------YILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTAT 114 (207)
T ss_dssp ------------------------------------EEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEE
T ss_pred ------------------------------------EEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEE
Confidence 999999999874 47788999999999999999999999999
Q ss_pred -ecCCCCCCCcEEEEEEEEeCCC
Q psy8640 282 -LSGTDLPVGYVVGHLRLVRFRS 303 (303)
Q Consensus 282 -~e~~~~p~gt~v~~v~A~D~D~ 303 (303)
+|++ |.|+.|++|+|+|+|.
T Consensus 115 v~E~~--~~gt~v~~v~A~D~D~ 135 (207)
T 3lnd_A 115 VPEMA--DVGTFVVQVTATDADD 135 (207)
T ss_dssp EESSC--CTTCEEEECCEECSSC
T ss_pred EeCCC--CCCCEEEEEEEEeCCC
Confidence 9999 6999999999999994
No 34
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=6.2e-24 Score=168.99 Aligned_cols=117 Identities=15% Similarity=0.249 Sum_probs=104.0
Q ss_pred CCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccC
Q psy8640 114 ENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVF 193 (303)
Q Consensus 114 vNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~L 193 (303)
.+.+.|.|....|.+.++|++++|+.|++|. +|+|.|.|+.++|+|..+... .+..++|.||+.||.|++.++|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~-----~~~~~~F~Id~~tG~i~~~~~L 78 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGIT-----EPPFGIFVFNKDTGELNVTSIL 78 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTT-----BSSCSSEEEETTTTEEEECSCC
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCC-----CCcCCCEEEeCCcCEEEECccc
Confidence 4688999999999999999999999999999 699999999999999986311 1223789999999999999999
Q ss_pred cccccceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeecCCCCC
Q psy8640 194 DYEARSRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESRDEFHP 271 (303)
Q Consensus 194 D~e~~~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~DvNdn~P 271 (303)
|||.... |.|.|.|+|.|.+ ++++.|+|.|+|+|||+|
T Consensus 79 DrE~~~~----------------------------------------y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P 118 (123)
T 2yqg_A 79 DREETPF----------------------------------------FLLTGYALDARGNNVEKPLELRIKVLDINDNEP 118 (123)
T ss_dssp BTTTBSE----------------------------------------EEEEEEEECTTCCEEEEEECCEEEEECTTCCCC
T ss_pred CcccCce----------------------------------------EEEEEEEEECCCCceEEEEEEEEEEEEcCCCCC
Confidence 9999998 9999999998874 778999999999999999
Q ss_pred eeCCC
Q psy8640 272 QFTER 276 (303)
Q Consensus 272 ~F~~~ 276 (303)
.|.++
T Consensus 119 ~F~~~ 123 (123)
T 2yqg_A 119 VFTQD 123 (123)
T ss_dssp CCCCC
T ss_pred EeCCC
Confidence 99863
No 35
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.84 E-value=3.7e-21 Score=149.93 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=78.0
Q ss_pred ceEEEEeCCCCCCeE--EEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEE
Q psy8640 125 EYLEFVGENEPIGSS--VFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYA 202 (303)
Q Consensus 125 ~~~~~V~E~~~~gt~--v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~ 202 (303)
.|.++|+||+++|+. |+++ |.|.|.|+.++|+|..+... .+..+.|.||+.||.|++.++||||....
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-- 75 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGAD-----QPPTGIFIINPISGQLSVTKPLDRELIAR-- 75 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCCE--
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCC-----CCcCCEEEEECCCCEEEECCcCCcccCCe--
Confidence 478999999999994 5554 77888899999999875211 12337899999999999999999999988
Q ss_pred EEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeecCCCCCee
Q psy8640 203 FTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESRDEFHPQF 273 (303)
Q Consensus 203 l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~DvNdn~P~F 273 (303)
|.|.|.|+|.|++ ++++.|+|.|+|+|||+|.|
T Consensus 76 --------------------------------------y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 76 --------------------------------------FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp --------------------------------------EEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred --------------------------------------EEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999998864 78899999999999999998
No 36
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=2.6e-21 Score=154.14 Aligned_cols=106 Identities=16% Similarity=0.142 Sum_probs=91.9
Q ss_pred CceEEEEeCCCCCCeEEEEEEEEeCCCCCCceE---EEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCccccc--
Q psy8640 124 TEYLEFVGENEPIGSSVFTARATDMDKGDYGKL---NYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEAR-- 198 (303)
Q Consensus 124 ~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i---~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~-- 198 (303)
..|.+.|+|+.++|+.|+++ |+|.|.+. +.+ +|+|..+... ++|.||+.||.|++.++||||..
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~---------~~F~Id~~tG~i~~~~~LDRE~~c~ 79 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNK---------QLLQLEQKSGNLLLKEKLDREELCG 79 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSS---------CSEEECSSSSEEEESSCCCSTTTCT
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCC---------CeEEEECCccEEEECccccchhhcc
Confidence 45788999999999999999 99988764 334 8999876533 78999999999999999999998
Q ss_pred --ceEEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCCeEEEEEEEEEeecCCCCCeeCCC
Q psy8640 199 --SRYAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEFHPQFTER 276 (303)
Q Consensus 199 --~~~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~s~~~~v~I~V~DvNdn~P~F~~~ 276 (303)
.. |.|.|.|.+ +.+...++|+|.|+|+|||+|.|.+.
T Consensus 80 ~~~~----------------------------------------y~l~v~a~~-~~p~~~~~V~I~V~DvNDN~P~F~~~ 118 (125)
T 1wyj_A 80 STNP----------------------------------------CILHFQVLL-KSPVQFIQGEIQLQDVNDHAPEFMED 118 (125)
T ss_dssp TCSS----------------------------------------CCBCCEEEE-TTTTEEECCCEEECCCCCCCCCCCCC
T ss_pred cCCc----------------------------------------EEEEEEEEE-CCCCeEEEEEEEEEEccCCCCcCCCc
Confidence 77 999999998 44556889999999999999999999
Q ss_pred eeEEE
Q psy8640 277 TFKFI 281 (303)
Q Consensus 277 ~y~~~ 281 (303)
.|.+.
T Consensus 119 ~y~vs 123 (125)
T 1wyj_A 119 ESGPS 123 (125)
T ss_dssp CCCCC
T ss_pred EEEEe
Confidence 88754
No 37
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.79 E-value=6.1e-19 Score=155.91 Aligned_cols=130 Identities=13% Similarity=0.159 Sum_probs=105.0
Q ss_pred ceEEEEeCCCCCCeEEEEEEEE-eCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEc---ccCcccccce
Q psy8640 125 EYLEFVGENEPIGSSVFTARAT-DMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTN---AVFDYEARSR 200 (303)
Q Consensus 125 ~~~~~V~E~~~~gt~v~~v~A~-D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~---~~LD~e~~~~ 200 (303)
.+.+.|+|++++|+.|+.+.+. |.|.+.|+.+.|+|..... ..|.|++.+|.+++. +.||||....
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~----------~~f~id~~tg~~~l~~t~~~LDrE~~~~ 90 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVD----------YWVLLDPVKQMLFLNSTGRVLDRDPPMN 90 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGG----------GCEEEETTTTEEEECCTTSCCCCSTTTC
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCC----------ceEEECCCCCEEEEEecCCceeccCCCc
Confidence 4788999999999998765544 4556689999999987543 679999999999875 5788888765
Q ss_pred EEEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC-CeEEEEEEEEEeecCCCCCeeCCCeeE
Q psy8640 201 YAFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG-RTCKVKVRVEIESRDEFHPQFTERTFK 279 (303)
Q Consensus 201 ~~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~-~s~~~~v~I~V~DvNdn~P~F~~~~y~ 279 (303)
| ..+.+.+.|.+.+. ..+.+.|+|.|.|+|||+|+|.+..|.
T Consensus 91 ~-------------------------------------~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~ 133 (242)
T 4apx_B 91 I-------------------------------------HSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYY 133 (242)
T ss_dssp C-------------------------------------CEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEE
T ss_pred e-------------------------------------EEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeee
Confidence 1 11445566666543 356788999999999999999999999
Q ss_pred EE-ecCCCCCCCcEEEE-----EEEEeCCC
Q psy8640 280 FI-LSGTDLPVGYVVGH-----LRLVRFRS 303 (303)
Q Consensus 280 ~~-~e~~~~p~gt~v~~-----v~A~D~D~ 303 (303)
+. +|++ |+|+.|++ |+|+|+|+
T Consensus 134 ~~v~En~--~~Gt~v~~~~~~~v~A~D~D~ 161 (242)
T 4apx_B 134 ATVNELT--PVGTTIFTGFSGDNGATDIDD 161 (242)
T ss_dssp EEEETTC--CTTCEEECTTTTTTSEECCSS
T ss_pred eEeeecc--CCCCEEEEeeecccccccCCC
Confidence 99 9999 69999987 78999995
No 38
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.76 E-value=1e-18 Score=135.99 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=77.1
Q ss_pred eeeEecceeEeecccccccc--ceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceE
Q psy8640 6 LVWLQPMQCLIMRRGVVHRE--NIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEH 83 (303)
Q Consensus 6 ~~~~~p~~~~i~e~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~ 83 (303)
+.|..| .+.|+||.+.|+. ..+. ....+.++.+.|+..+.- ..++..++|.|++.||.|+++++||||.... |
T Consensus 2 r~W~~~-~~~v~En~~~gt~~~v~~v-d~D~g~n~~i~Y~i~~~~--~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y 76 (110)
T 1ncg_A 2 SDWVIP-PINLPENSRGPFPQELVRI-RSGRDKNLSLRYSVTGPG--ADQPPTGIFIINPISGQLSVTKPLDRELIAR-F 76 (110)
T ss_dssp -CCCCC-CEEECSSCCCCSSEEEEEC-CCGGGGGSCCEEEEESBT--TTBSSTTSEEECTTTCEEEECSCCCTTTCCE-E
T ss_pred CccEee-eEEEeCCCCCCCcEEEEEE-eCCCCCCCEEEEEEeCCC--CCCCcCCEEEEECCCCEEEECCcCCcccCCe-E
Confidence 468875 8899999999885 3322 223456777777653311 1234568999999999999999999999999 9
Q ss_pred EEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcC
Q psy8640 84 LLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKF 121 (303)
Q Consensus 84 ~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f 121 (303)
.|.|.|+|+|. +++++++.|.|.|.|+|||+|.|
T Consensus 77 ~l~V~A~D~g~----p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 77 HLRAHAVDING----NQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEEEEECTTS----CBCSCCEEEEEEEC---------
T ss_pred EEEEEEEECCC----CceeeEEEEEEEEEECCCCCCCC
Confidence 99999999997 78899999999999999999998
No 39
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.1e-18 Score=138.68 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=90.7
Q ss_pred CcccceeeEecceeEeeccc--cccccceEEEEEE--ecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCC
Q psy8640 1 MKTRSLVWLQPMQCLIMRRG--VVHRENIQVYLVW--YGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDY 76 (303)
Q Consensus 1 ~~~~~~~~~~p~~~~i~e~~--~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~ 76 (303)
+++.|+.|..| ++.|.|+. ++|+...+..+ . .+.++.+.|++.+.- ...+...+|.|++.||.|+++++|||
T Consensus 5 ~~r~~p~f~~~-~~~v~e~e~~~~gt~v~~v~~-D~D~g~n~~i~Y~i~~~~--~~~~~~~~F~Id~~tG~i~~~~~LDr 80 (123)
T 2yqg_A 5 SSGQKRAWITA-PVALREGEDLSKKNPIAKIHS-DLAEERGLKITYKYTGKG--ITEPPFGIFVFNKDTGELNVTSILDR 80 (123)
T ss_dssp SSCSCCSSCCC-CEEEESSSCCCSSCCCBCCCC-HHHHHHTCCCEEEEEEBT--TTBSSCSSEEEETTTTEEEECSCCBT
T ss_pred ccccCCccCCC-CEEEEecCCCCCCCEEEEEEE-CCCCCCCceEEEEEecCC--CCCCcCCCEEEeCCcCEEEECcccCc
Confidence 46789999985 78888877 56776655542 2 144567777543310 01134579999999999999999999
Q ss_pred CCCCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCC
Q psy8640 77 DTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPIT 124 (303)
Q Consensus 77 E~~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~ 124 (303)
|.... |.|+|.|+|+|. +++++++.|.|.|.|+|||+|.|.++
T Consensus 81 E~~~~-y~l~V~A~D~g~----p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 81 EETPF-FLLTGYALDARG----NNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp TTBSE-EEEEEEEECTTC----CEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred ccCce-EEEEEEEEECCC----CceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 99999 999999999987 78899999999999999999999763
No 40
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.74 E-value=9.8e-18 Score=127.73 Aligned_cols=89 Identities=21% Similarity=0.279 Sum_probs=78.2
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEE
Q psy8640 126 YLEFVGENEP--IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203 (303)
Q Consensus 126 ~~~~V~E~~~--~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l 203 (303)
+.+.|+||.+ .|+.|+++. +|+|.| |++++|+|.+.... +.|.||+.||.|++.++||||+...
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~---------~~F~Id~~tG~i~~~~~LDrE~~~~--- 70 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAG---------TIFQINDITGDIHAIKRLDREEKAE--- 70 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBT---------TTEEECTTTCEEEECSCCCTTTCSE---
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCC---------CEEEEECCccEEEECccCCCcCCCe---
Confidence 5789999985 899999997 999999 99999999876432 5899999999999999999999998
Q ss_pred EEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCC---CeEEEEEEEEEee
Q psy8640 204 TLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGG---RTCKVKVRVEIES 265 (303)
Q Consensus 204 ~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~---~s~~~~v~I~V~D 265 (303)
|.|+|.|+|.|. +++++.|+|.|+|
T Consensus 71 -------------------------------------y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 71 -------------------------------------YTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp -------------------------------------EEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred -------------------------------------EEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 999999999986 4788999999987
No 41
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.74 E-value=1.2e-17 Score=127.56 Aligned_cols=89 Identities=27% Similarity=0.352 Sum_probs=79.9
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEE
Q psy8640 126 YLEFVGENEP--IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203 (303)
Q Consensus 126 ~~~~V~E~~~--~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l 203 (303)
+.+.|+||.+ .|+.|++|. +|+|.| |++++|+|.++.+. +.|.||+.+|.|++.++||||+...
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~---------~~F~Id~~tG~i~~~~~LDrE~~~~--- 71 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAG---------IVFTIDDTTGDIHAIQRLDREERSQ--- 71 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBT---------TTEEECTTTCEEEECSCCCTTTCSE---
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCC---------ceEEEeCCCCCEEECeecCCccCCe---
Confidence 5789999976 689999999 999999 99999999886532 6899999999999999999999998
Q ss_pred EEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECC-CC--eEEEEEEEEEee
Q psy8640 204 TLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSG-GR--TCKVKVRVEIES 265 (303)
Q Consensus 204 ~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g-~~--s~~~~v~I~V~D 265 (303)
|.|+|.|+|.| ++ ++++.|.|.|+|
T Consensus 72 -------------------------------------y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 72 -------------------------------------YTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp -------------------------------------EEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred -------------------------------------EEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 99999999998 33 788999999987
No 42
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.70 E-value=9.2e-17 Score=122.56 Aligned_cols=91 Identities=18% Similarity=0.226 Sum_probs=78.5
Q ss_pred eEEEEeCCCCC--CeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEE
Q psy8640 126 YLEFVGENEPI--GSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAF 203 (303)
Q Consensus 126 ~~~~V~E~~~~--gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l 203 (303)
..+.|+||.++ |+.|++|.|+|+|. .++|+|.+.... .+..+.|.||+.||.|++.++||||....
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~--- 72 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVD-----QEPKGIFKINENSGEVSVTKALDREAIPS--- 72 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCCE---
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCC-----CCCCCEEEEECCceEEEECcCCCcccCce---
Confidence 46899999999 99999999999997 799999863211 22347899999999999999999999998
Q ss_pred EEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEee
Q psy8640 204 TLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIES 265 (303)
Q Consensus 204 ~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~D 265 (303)
|.|.|.|+|.|++ ++++.|+|.|+|
T Consensus 73 -------------------------------------y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 73 -------------------------------------YQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp -------------------------------------EEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred -------------------------------------EEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 9999999998875 667889999887
No 43
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.68 E-value=3.4e-16 Score=119.63 Aligned_cols=90 Identities=20% Similarity=0.276 Sum_probs=77.8
Q ss_pred EEEEeCCCCC--CeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEE
Q psy8640 127 LEFVGENEPI--GSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204 (303)
Q Consensus 127 ~~~V~E~~~~--gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~ 204 (303)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+.... .+..+.|.||+.||.|++.++||||....
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~---- 73 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVD-----QDPKGTFRINENTGSVSVTRTLDRETIAT---- 73 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCSE----
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCC-----CCcCCEEEEECCCCEEEECcccCCcCCCE----
Confidence 6799999998 89999999999997 599999874321 22347899999999999999999999998
Q ss_pred EEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEee
Q psy8640 205 LLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIES 265 (303)
Q Consensus 205 v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~D 265 (303)
|.|.|.|+|.|++ ++.++|+|.|+|
T Consensus 74 ------------------------------------y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 74 ------------------------------------YQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp ------------------------------------EEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred ------------------------------------EEEEEEEEECCCCcccceEEEEEEEEC
Confidence 9999999999885 678889999887
No 44
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.68 E-value=5e-16 Score=118.43 Aligned_cols=90 Identities=19% Similarity=0.298 Sum_probs=77.6
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEE
Q psy8640 127 LEFVGENEPIG--SSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204 (303)
Q Consensus 127 ~~~V~E~~~~g--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~ 204 (303)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+.... .+..+.|.||+.||.|++.++||||....
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~-----~~~~~~F~Id~~tG~i~~~~~LDrE~~~~---- 72 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVD-----QDPKGIFRINEISGDVSVTRPLDREAIAN---- 72 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCCE----
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCC-----CCcCCEEEEECCCcEEEECcccCCccCCE----
Confidence 47899999986 8999999999997 799999864321 22237899999999999999999999998
Q ss_pred EEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEee
Q psy8640 205 LLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIES 265 (303)
Q Consensus 205 v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~D 265 (303)
|.|.|.|+|.|++ ++.++|.|.|+|
T Consensus 73 ------------------------------------y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 73 ------------------------------------YELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp ------------------------------------EEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred ------------------------------------EEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 9999999999885 678889999887
No 45
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.67 E-value=2.1e-16 Score=121.92 Aligned_cols=92 Identities=20% Similarity=0.286 Sum_probs=77.5
Q ss_pred EEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceEEEE
Q psy8640 127 LEFVGENEP--IGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRYAFT 204 (303)
Q Consensus 127 ~~~V~E~~~--~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~~l~ 204 (303)
.+.|+||.+ .|..|+++.| |.|.|++++|+|..++.. ....+.|.||+.||.|++.++||||....
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~-----~~~~~~F~Id~~tG~I~~~~~LDrE~~~~---- 77 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGAD-----TPPVGVFIIERETGWLKVTEPLDRERIAT---- 77 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTT-----BSSTTSEEECTTTCEEEECSCCCTTTCCE----
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCC-----CCccCEEEEeCCCCEEEECccCCcCCCCe----
Confidence 578999998 5889999999 336799999999986521 11136899999999999999999999998
Q ss_pred EEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCC--eEEEEEEEEEeec
Q psy8640 205 LLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGR--TCKVKVRVEIESR 266 (303)
Q Consensus 205 v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~--s~~~~v~I~V~Dv 266 (303)
|.|+|.|+|.|++ ++++.|+|.|+|+
T Consensus 78 ------------------------------------y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 78 ------------------------------------YTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp ------------------------------------EEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred ------------------------------------EEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 9999999999885 6789999999996
No 46
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=7.2e-16 Score=121.43 Aligned_cols=97 Identities=18% Similarity=0.238 Sum_probs=79.1
Q ss_pred ceeEeeccccccccceEEEEEEe--cccCceeeeecccccccCCCC--cccEEEeCCccEEEEcccCCCCCCCceEEEEE
Q psy8640 12 MQCLIMRRGVVHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQR--LAIQAVDPLTGVLSVQQPLDYDTGSSEHLLIL 87 (303)
Q Consensus 12 ~~~~i~e~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~--~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l~i 87 (303)
..+.|+||.++|+...+..+..- |.++++.|+..+ +.. ..+|.|++.||.|+++++||||.... |.|.|
T Consensus 19 y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~------~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~-y~l~V 91 (119)
T 2yst_A 19 YEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGA------ATESVRRLLRLDETSGWLSVLHRIDREEVNQ-LRFTV 91 (119)
T ss_dssp EEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECS------CCTTHHHHEEECTTTCEEEECSCCCTTTCSE-EEEEE
T ss_pred EEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEec------CCCccccEEEEeCCceEEEECccCCcccCCE-EEEEE
Confidence 45789999999988776655432 344555564322 111 46899999999999999999999999 99999
Q ss_pred EEEECCCCCCCCCCeeEEEEEEEEEcCCCCCC
Q psy8640 88 KVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119 (303)
Q Consensus 88 ~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P 119 (303)
.|+|+|. ++++++++|.|.|.|+|||+|
T Consensus 92 ~A~D~g~----p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 92 MARDRGQ----PPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EECCSBT----TBCCEEEEEEEEEECSTTCCC
T ss_pred EEEECCC----CCcEEEEEEEEEEEeccCCCC
Confidence 9999997 788999999999999999998
No 47
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.61 E-value=1.8e-15 Score=116.56 Aligned_cols=101 Identities=15% Similarity=0.190 Sum_probs=79.6
Q ss_pred ceeeEecceeEeecccc--ccccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCce
Q psy8640 5 SLVWLQPMQCLIMRRGV--VHRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSE 82 (303)
Q Consensus 5 ~~~~~~p~~~~i~e~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~ 82 (303)
|+.|.-| ++.|+||.+ .+....+..+ .-+.++++.|+..+.-. ...+.++|.||+.||.|++.++||||....
T Consensus 3 kr~w~~~-~~~V~En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~--~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~- 77 (105)
T 2omz_B 3 LGSWVIP-PISCPENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGA--DTPPVGVFIIERETGWLKVTEPLDRERIAT- 77 (105)
T ss_dssp STTEECC-CCCEESSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTT--TBSSTTSEEECTTTCEEEECSCCCTTTCCE-
T ss_pred cccEEcc-CEEEeCCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCC--CCCccCEEEEeCCCCEEEECccCCcCCCCe-
Confidence 5569987 899999999 4555555554 44677888886533110 111246899999999999999999999999
Q ss_pred EEEEEEEEECCCCCCCCCCeeEEEEEEEEEcC
Q psy8640 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDE 114 (303)
Q Consensus 83 ~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~Dv 114 (303)
|.|+|.|+|+|. +++++++.|.|.|.|+
T Consensus 78 y~l~V~A~D~g~----p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 78 YTLFSHAVSSNG----NAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEEEEEECTTS----CBSSCCEEEEEEEEC-
T ss_pred EEEEEEEEECCC----CceeeEEEEEEEEEeC
Confidence 999999999997 7889999999999986
No 48
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=3.8e-16 Score=124.18 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=80.1
Q ss_pred cceeEeeccccccccceEEEEEEeccc-Cce---eeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCC----Cce
Q psy8640 11 PMQCLIMRRGVVHRENIQVYLVWYGST-SRL---CRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTG----SSE 82 (303)
Q Consensus 11 p~~~~i~e~~~~~~~~~~~~~i~~~~~-~~~---~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~----~~~ 82 (303)
++.+.|+|+.+.|+...+. +-..+.. +.+ .| ++..++...+|.||+.||.|+++++||||.. ..
T Consensus 12 ~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y------~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~- 83 (125)
T 1wyj_A 12 TITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGA------QILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNP- 83 (125)
T ss_dssp CCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTC------EEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSS-
T ss_pred eEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEE------EEecCCCCCeEEEECCccEEEECccccchhhcccCCc-
Confidence 4668999999998886654 2111111 112 34 3334556789999999999999999999999 88
Q ss_pred EEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEE
Q psy8640 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEF 129 (303)
Q Consensus 83 ~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~ 129 (303)
|.|.+.|.+.. +. ..++|.|.|.|+|||+|.|.+..|.++
T Consensus 84 y~l~v~a~~~~------p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 84 CILHFQVLLKS------PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCBCCEEEETT------TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEECC------CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999999743 33 478999999999999999999988764
No 49
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.55 E-value=4.4e-14 Score=107.58 Aligned_cols=96 Identities=23% Similarity=0.181 Sum_probs=73.5
Q ss_pred eEecceeEeecccccc--ccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEEE
Q psy8640 8 WLQPMQCLIMRRGVVH--RENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLL 85 (303)
Q Consensus 8 ~~~p~~~~i~e~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l 85 (303)
|+-| ++.|+||.+.+ ....++.+.. ...++.|...|. ...++..+.|.||+.||.|++.++||||.... |.|
T Consensus 2 Wv~~-~~~v~EN~~~g~~~~v~~V~A~D--~D~~i~Ysi~~~--~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~l 75 (99)
T 3k6i_A 2 ILAT-PILIPENQRPPFPRSVGKVIRSE--GTEGAKFRLSGK--GVDQDPKGIFRINEISGDVSVTRPLDREAIAN-YEL 75 (99)
T ss_dssp EECC-CEEEETTCCSSSCEEEEECEETT--CCSSEEEEEESB--TTTBSSTTSEEECTTTCEEEECSCCCTTTCCE-EEE
T ss_pred cccC-cEEEeCCCCCCCCeEEEEEEEEc--CCCeEEEEEeCC--CCCCCcCCEEEEECCCcEEEECcccCCccCCE-EEE
Confidence 8875 89999999976 4444444311 111455543221 12234568999999999999999999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEc
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~D 113 (303)
.|.|+|+|. +++++.+++.|.|.|
T Consensus 76 ~v~A~D~g~----~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 76 EVEVTDLSG----KIIDGPVRLDISVID 99 (99)
T ss_dssp EEEEEETTS----CEEEEEEEEEEEEEC
T ss_pred EEEEEECCC----CceeeeEEEEEEEEC
Confidence 999999997 789999999999987
No 50
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.55 E-value=1.2e-15 Score=117.14 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=75.6
Q ss_pred CceEEEEeCCCCCCeEEEEEEEEeCCCCCC--ceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcccccceE
Q psy8640 124 TEYLEFVGENEPIGSSVFTARATDMDKGDY--GKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDYEARSRY 201 (303)
Q Consensus 124 ~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n--~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~e~~~~~ 201 (303)
..+.++|+|+.++|+.|++| |.|+|.+.+ +.+.|+|..+.+. .+|.||+.||.|++.++||||....
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~---------~~F~Id~~tG~i~~~~~LDRE~~~~- 71 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRG---------DLLEVNLQNGILFVNSRIDREELCG- 71 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCS---------CSEEEETTTTEEEECSCCSHHHHCS-
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCc---------cEEEEECCeEEEEECCcCccccccC-
Confidence 45788999999999999999 999886532 4689999876533 7899999999999999999998631
Q ss_pred EEEEEEEEEEeecccccCCCceEEEeecCceeeeeeecEEEEEEEEEECCCCeEEEEEEEEEeecCCC
Q psy8640 202 AFTLLSTYSVWTRSLVWSRPMQCLIMRRGVVFDYEARSRYAFTLLSTDSGGRTCKVKVRVEIESRDEF 269 (303)
Q Consensus 202 ~l~v~a~~~~~~~~~~~~~~~~~~i~~~~~~lD~E~~~~y~l~V~a~D~g~~s~~~~v~I~V~DvNdn 269 (303)
....|.+.+.|.. +.+...+.|.|.|+|+|||
T Consensus 72 -----------------------------------~~~~~~~~~~v~~-~~p~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 72 -----------------------------------RSAECSIHLEVIV-DRPLQVFHVEVEVRDINDN 103 (103)
T ss_dssp -----------------------------------SSSSCEEEEEEEE-TTTTEEEEEEEEEECCSCC
T ss_pred -----------------------------------CCCcEEEEEEEEE-CCCCEEEEEEEEEEEcCCC
Confidence 0001334444443 3344588999999999997
No 51
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.53 E-value=4.5e-14 Score=107.74 Aligned_cols=97 Identities=20% Similarity=0.095 Sum_probs=75.0
Q ss_pred eeEecceeEeeccccc--cccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEE
Q psy8640 7 VWLQPMQCLIMRRGVV--HRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHL 84 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~ 84 (303)
.|+- .++.|+||.+. +....+..+..-. ..+.|+..|. ...++..+.|.||+.||.|++.++||||.... |.
T Consensus 2 ~Wi~-~~~~V~EN~~~~~g~~v~~V~A~D~D--~~i~Ysi~~~--~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~ 75 (100)
T 3k6f_A 2 GIVV-SPILIPENQRQPFPRDVGKVVDSDRP--EGSKFRLTGK--GVDQDPKGTFRINENTGSVSVTRTLDRETIAT-YQ 75 (100)
T ss_dssp CEEC-CCEEEETTCCSSSCEEEEECEETTCC--TTCEEEEEEB--TTTBSSTTSEEECTTTCEEEECSCCCTTTCSE-EE
T ss_pred Cccc-CcEEEeCCCCCCCCcEEEEEEEEcCC--CCEEEEEeCC--CCCCCcCCEEEEECCCCEEEECcccCCcCCCE-EE
Confidence 4777 48999999997 5555555442211 1455644321 12234568999999999999999999999999 99
Q ss_pred EEEEEEECCCCCCCCCCeeEEEEEEEEEc
Q psy8640 85 LILKVEDGGKPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 85 l~i~a~D~g~~~~~~~~s~~~~v~I~V~D 113 (303)
|.|.|+|+|. +++++.+++.|.|.|
T Consensus 76 l~V~A~D~g~----p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 76 LYVETTDASG----KTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEEEECTTC----CEEEEEEEEEEEEEC
T ss_pred EEEEEEECCC----CcccceEEEEEEEEC
Confidence 9999999997 789999999999987
No 52
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.49 E-value=7.6e-14 Score=106.26 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=76.4
Q ss_pred eEecceeEeeccccc--cccceEEEEEEecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceEEE
Q psy8640 8 WLQPMQCLIMRRGVV--HRENIQVYLVWYGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEHLL 85 (303)
Q Consensus 8 ~~~p~~~~i~e~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~~l 85 (303)
|+- .++.|+||.+. +....+..+..- ..++.|+..|. ...++..+.|.||+.||.|++.++||||.... |.|
T Consensus 2 W~~-~~~~V~En~~~~~g~~v~~v~A~D~--D~~i~Ysi~~~--~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y~l 75 (99)
T 3k6d_A 2 IVA-PSISIPENQRIPFPKIVGRVVVSDR--IPGSKIKLYGK--GVDQEPKGIFKINENSGEVSVTKALDREAIPS-YQL 75 (99)
T ss_dssp CBC-CCEEEETTCCSCSSEEEEECBCSSC--CTTCEEEEESB--TTTBSSTTSEEECTTTCEEEECSCCCTTTCCE-EEE
T ss_pred ccc-CcEEEeCCCCCCCCcEEEEEEEECC--CCcEEEEEecC--cCCCCCCCEEEEECCceEEEECcCCCcccCce-EEE
Confidence 665 48999999998 887776665322 22556654321 12345568999999999999999999999999 999
Q ss_pred EEEEEECCCCCCCCCCeeEEEEEEEEEc
Q psy8640 86 ILKVEDGGKPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 86 ~i~a~D~g~~~~~~~~s~~~~v~I~V~D 113 (303)
.|.|+|+|. +++++.+.+.|.|.|
T Consensus 76 ~V~A~D~g~----~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 76 QVETTDENG----KTIEGPVDLEILVID 99 (99)
T ss_dssp EEEEECTTC----CEEEEEEEEEEEEEC
T ss_pred EEEEEECCC----CceeeEEEEEEEEEC
Confidence 999999987 788999999999987
No 53
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.49 E-value=7.4e-14 Score=106.32 Aligned_cols=93 Identities=18% Similarity=0.136 Sum_probs=72.4
Q ss_pred eeEecceeEeecccc--ccccceEEEEEE--ecccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCce
Q psy8640 7 VWLQPMQCLIMRRGV--VHRENIQVYLVW--YGSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSE 82 (303)
Q Consensus 7 ~~~~p~~~~i~e~~~--~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~ 82 (303)
-|+. .++.|+||.+ .+....+.. .. .| +|++.|+. ...+..+.|.||+.+|.|++.++||||+.+.
T Consensus 2 ~w~~-~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi------~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~- 71 (99)
T 1zvn_A 2 GWVW-NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYIL------SGEGAGIVFTIDDTTGDIHAIQRLDREERSQ- 71 (99)
T ss_dssp CBCC-CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEE------EETTBTTTEEECTTTCEEEECSCCCTTTCSE-
T ss_pred Cccc-cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEE------eCCCCCceEEEeCCCCCEEECeecCCccCCe-
Confidence 3766 6788999987 344444443 22 14 67777754 2333447899999999999999999999999
Q ss_pred EEEEEEEEECC-CCCCCCCCeeEEEEEEEEEc
Q psy8640 83 HLLILKVEDGG-KPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 83 ~~l~i~a~D~g-~~~~~~~~s~~~~v~I~V~D 113 (303)
|.|+|.|+|+| . +++++.+.|.|.|.|
T Consensus 72 y~l~V~A~D~G~~----p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 72 YTLRAQALDRRTG----RPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEEEEEEETTTC----CBSSCCEEEEEEEEC
T ss_pred EEEEEEEEECCCC----CCcceeEEEEEEEeC
Confidence 99999999998 4 678999999999987
No 54
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.48 E-value=1e-13 Score=105.37 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=70.6
Q ss_pred eEecceeEeecccc--ccccceEEEEEEe--cccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCceE
Q psy8640 8 WLQPMQCLIMRRGV--VHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSEH 83 (303)
Q Consensus 8 ~~~p~~~~i~e~~~--~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~ 83 (303)
|+. .++.|+||.+ .+....+.. ..- | ++++.|+.. ..+..+.|.||+.||.|++.++||||.++. |
T Consensus 2 W~~-~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~------~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~-y 71 (98)
T 1zxk_A 2 WVW-NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILS------GDGAGTIFQINDITGDIHAIKRLDREEKAE-Y 71 (98)
T ss_dssp BCC-CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEE------ETTBTTTEEECTTTCEEEECSCCCTTTCSE-E
T ss_pred ccc-ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEe------CCCCCCEEEEECCccEEEECccCCCcCCCe-E
Confidence 666 7899999995 555544443 221 4 566666542 223346899999999999999999999999 9
Q ss_pred EEEEEEEECCCCCCCCCCeeEEEEEEEEEc
Q psy8640 84 LLILKVEDGGKPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 84 ~l~i~a~D~g~~~~~~~~s~~~~v~I~V~D 113 (303)
.|+|.|+|+|.+ +++++++.|.|.|.|
T Consensus 72 ~l~v~A~D~g~~---~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 72 TLTAQAVDFETN---KPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEEEEEETTTC---CBSSCCEEEEEEECC
T ss_pred EEEEEEEECCCC---CCcceeEEEEEEEEC
Confidence 999999999852 568999999999986
No 55
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=6.5e-13 Score=103.67 Aligned_cols=100 Identities=21% Similarity=0.273 Sum_probs=77.0
Q ss_pred eeeEec-ceeEeeccccccccceEEEEEEe--cccCceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCCce
Q psy8640 6 LVWLQP-MQCLIMRRGVVHRENIQVYLVWY--GSTSRLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGSSE 82 (303)
Q Consensus 6 ~~~~~p-~~~~i~e~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~ 82 (303)
..+.++ ..+.|+||.++|+...+..+..- |.++++.|+..+..+ ++...+|.|++.||.|+++++||||....
T Consensus 12 P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~---~~~~~~F~Id~~tG~I~~~~~LD~E~~~~- 87 (114)
T 2ee0_A 12 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVA---PATKRLFALNNTTGLITVQRSLDREETAI- 87 (114)
T ss_dssp CCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCC---HHHHHHEEECTTTCEEEECSCCCTTTCSE-
T ss_pred CCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCC---CCccceEEEeCCeeEEEECccCCcccCcE-
Confidence 344433 45789999999988776665433 445667775433211 13457999999999999999999999999
Q ss_pred EEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCC
Q psy8640 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQDEN 115 (303)
Q Consensus 83 ~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvN 115 (303)
|.|.|.|+|+|. ++ ++++|.|.|.|+|
T Consensus 88 y~l~V~A~D~g~----~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 88 HKVTVLASDGSS----TP--ARATVTINVTDVN 114 (114)
T ss_dssp EEEEEEEESSSS----SC--EEEEEEEEEECCC
T ss_pred EEEEEEEEECCC----Cc--eEEEEEEEEEECC
Confidence 999999999986 33 7899999999998
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.08 E-value=6.9e-11 Score=90.42 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=65.5
Q ss_pred ecceeEeeccccccccceEEEEEEecccC----ceeeeecccccccCCCCcccEEEeCCccEEEEcccCCCCCCC----c
Q psy8640 10 QPMQCLIMRRGVVHRENIQVYLVWYGSTS----RLCRRTCGTIPLSQQQRLAIQAVDPLTGVLSVQQPLDYDTGS----S 81 (303)
Q Consensus 10 ~p~~~~i~e~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~----~ 81 (303)
.++.++|+|+.+.|+...+. +-.-+..+ .+.| ++..++...+|.||+.||.|+++++||||... .
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y------~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~ 75 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLF------RVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAE 75 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTB------CCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSS
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEE------EEEeCCCccEEEEECCeEEEEECCcCccccccCCCCc
Confidence 35678999999988886655 32222221 2344 33445567899999999999999999999862 3
Q ss_pred eEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCC
Q psy8640 82 EHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDN 117 (303)
Q Consensus 82 ~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn 117 (303)
+.+.+.+... . ++ ....+.|.|.|+|||
T Consensus 76 -~~~~~~v~~~-~-----p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 76 -CSIHLEVIVD-R-----PL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp -CEEEEEEEET-T-----TT-EEEEEEEEEECCSCC
T ss_pred -EEEEEEEEEC-C-----CC-EEEEEEEEEEEcCCC
Confidence 4555555543 2 23 378999999999997
No 57
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=93.36 E-value=0.41 Score=38.64 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=51.0
Q ss_pred CCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCcccCCCcCcEEEECCCcEEEEcccCcc
Q psy8640 116 DNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAASGYTDVDDSWKLFRVDALTGLVTTNAVFDY 195 (303)
Q Consensus 116 Dn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 195 (303)
.+-|-|.+..|...++-+...|..+++|...|... +..+.|.-.++ .-|.|++ .|.|++.+.+-.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssDp------------~dFkV~~-DGtVya~r~v~L 95 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEP------------ADFKVDE-DGTVYAVRSFPL 95 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCS------------SEEEEET-TTEEEEESCCSC
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEcCCC------------CCeEEeC-CCcEEEecceee
Confidence 45789999999777878888999999999988753 55677765443 2599986 599999988753
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=92.30 E-value=4.1 Score=33.52 Aligned_cols=57 Identities=12% Similarity=-0.104 Sum_probs=33.6
Q ss_pred CceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCC---CC-eEEEEEEEEeCC
Q psy8640 80 SSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEP---IG-SSVFTARATDMD 149 (303)
Q Consensus 80 ~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~---~g-t~v~~v~A~D~D 149 (303)
-. |.|+++|.|... ..+....+.|.|.+ ..+|.. .+.-+.+.. .| ..-+...|.|.|
T Consensus 61 G~-htlta~A~D~aG-----n~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~ 121 (190)
T 3pdd_A 61 GA-YNLKAVAVLSDG-----RRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSD 121 (190)
T ss_dssp EE-EEEEEEEEETTS-----CEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSS
T ss_pred cc-EEEEEEEEECCC-----CEeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCC
Confidence 35 999999999753 23333457777776 446643 344444322 23 444667777755
No 59
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.79 E-value=0.91 Score=33.58 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=27.4
Q ss_pred ecEEEEEEEEEECCCCeEEEEEEEEEeecCC
Q psy8640 238 RSRYAFTLLSTDSGGRTCKVKVRVEIESRDE 268 (303)
Q Consensus 238 ~~~y~l~V~a~D~g~~s~~~~v~I~V~DvNd 268 (303)
.+.|.|++.++|..+.+++.+++|.|...+.
T Consensus 68 ~G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 68 VGTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SSEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred CeEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 4569999999999889999999999998766
No 60
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=80.44 E-value=3.2 Score=29.26 Aligned_cols=30 Identities=30% Similarity=0.423 Sum_probs=24.0
Q ss_pred eeecEEEEEEEEEECCCCeEEEEEEEEEee
Q psy8640 236 EARSRYAFTLLSTDSGGRTCKVKVRVEIES 265 (303)
Q Consensus 236 E~~~~y~l~V~a~D~g~~s~~~~v~I~V~D 265 (303)
.+.+.|.+++.++|..+.+++.++.|.|.+
T Consensus 56 ~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~n 85 (85)
T 2y72_A 56 KKAGTYNVTLKVTDDKGATATESFTIEIKN 85 (85)
T ss_dssp SSCEEEEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEECCCCEEEEEEEEEEcC
Confidence 334559999999998888888888888853
No 61
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=78.00 E-value=4.7 Score=29.89 Aligned_cols=31 Identities=32% Similarity=0.481 Sum_probs=27.2
Q ss_pred EEEEEEEEECCCCeEEEEEEEEEeecCCCCC
Q psy8640 241 YAFTLLSTDSGGRTCKVKVRVEIESRDEFHP 271 (303)
Q Consensus 241 y~l~V~a~D~g~~s~~~~v~I~V~DvNdn~P 271 (303)
|.++..++|..+..++++.+|.|.+..+..|
T Consensus 61 Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 61 YVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 9999999999999889999999998776543
No 62
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=70.78 E-value=19 Score=29.42 Aligned_cols=57 Identities=11% Similarity=0.044 Sum_probs=35.7
Q ss_pred cEEEEEEEEEECCCCeEE-EEEEEEEeecCCCCCeeCCCeeEEE-ecC-CCC-CCCcEEEEEEEEeCC
Q psy8640 239 SRYAFTLLSTDSGGRTCK-VKVRVEIESRDEFHPQFTERTFKFI-LSG-TDL-PVGYVVGHLRLVRFR 302 (303)
Q Consensus 239 ~~y~l~V~a~D~g~~s~~-~~v~I~V~DvNdn~P~F~~~~y~~~-~e~-~~~-p~gt~v~~v~A~D~D 302 (303)
+.|.|+++|+|..+..+. ..+.|.|.+ +. +|... +. +.+ ..+ ..+.+-++..|.|.|
T Consensus 61 G~htlta~A~D~aGn~s~s~~v~vtV~~-~~-~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~ 121 (190)
T 3pdd_A 61 GAYNLKAVAVLSDGRRIESPVTPVLVKV-IV-KPTVK-----LTAPKSNVVAYGNEFLKITATASDSD 121 (190)
T ss_dssp EEEEEEEEEEETTSCEEECCCEEEEEEC-CC-CCEEE-----EEECCTTCCCBTTSEEEEEEEEECSS
T ss_pred ccEEEEEEEEECCCCEeeecceeEEecc-CC-CCcee-----ecCCCCCcEEecCCeEEEEEEEECCC
Confidence 449999999998776443 457788876 33 77642 33 322 211 133456678888876
No 63
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=62.72 E-value=62 Score=28.40 Aligned_cols=48 Identities=19% Similarity=0.158 Sum_probs=26.8
Q ss_pred CCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCC
Q psy8640 115 NDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGKLNYSIISAAA 165 (303)
Q Consensus 115 NDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~ 165 (303)
+|++..|....-...|.|+. |+.-..|.-.- +......+.|....+.+
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA 53 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTA 53 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSS
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCcc
Confidence 46677776666678899985 55444443332 33344578888877754
No 64
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=62.28 E-value=75 Score=29.62 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=19.6
Q ss_pred EEEEEEEEECC--CCeEEEEEEEEE
Q psy8640 241 YAFTLLSTDSG--GRTCKVKVRVEI 263 (303)
Q Consensus 241 y~l~V~a~D~g--~~s~~~~v~I~V 263 (303)
|.|.++++|.+ +.++...|.|+|
T Consensus 412 l~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 412 IHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCCccEEeEEEEEe
Confidence 99999999988 457778888877
No 65
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=55.58 E-value=56 Score=23.62 Aligned_cols=27 Identities=7% Similarity=0.212 Sum_probs=20.6
Q ss_pred cEEEEEEEEEECCCC-eEEEEEEEEEee
Q psy8640 239 SRYAFTLLSTDSGGR-TCKVKVRVEIES 265 (303)
Q Consensus 239 ~~y~l~V~a~D~g~~-s~~~~v~I~V~D 265 (303)
+.|.|.++|+|..+. ..+..|.|+|.+
T Consensus 61 G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred ccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 349999999998775 446777777764
No 66
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.56 E-value=26 Score=25.45 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=25.4
Q ss_pred CCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCC
Q psy8640 79 GSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDEND 116 (303)
Q Consensus 79 ~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvND 116 (303)
... |.|++.++|.. ..+++.++.|.|...++
T Consensus 68 ~G~-y~f~LTVtD~~------G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 68 VGT-YVFTLTVKDER------NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SSE-EEEEEEEEBTT------CCEEEEEEEEEEECCSS
T ss_pred CeE-EEEEEEEEeCC------CCEEEeEEEEEEcCCCC
Confidence 346 99999999975 36888999999997665
No 67
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=54.05 E-value=1.1e+02 Score=26.70 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=45.0
Q ss_pred CCCCCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCCcCCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCce
Q psy8640 76 YDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAPKFPITEYLEFVGENEPIGSSVFTARATDMDKGDYGK 155 (303)
Q Consensus 76 ~E~~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~ 155 (303)
+|..+. |.+.+..-.++. .+......+|.|.| ||++|.|....-...|.|+. |.....|.-.-. ....-.
T Consensus 87 ~E~dEt-F~v~Ls~p~~~a-----~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g~vt 156 (298)
T 3rb5_A 87 FEEDEC-FYIRLFNPSEGV-----KLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARGTVI 156 (298)
T ss_dssp CCCCEE-EEEEEECCCTTC-----CBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCSCEE
T ss_pred ccCcEE-EEEEEeCCCCCc-----EECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCCCEE
Confidence 455555 666655432221 22223345666666 67789876666678899984 665555554422 222346
Q ss_pred EEEEEeeCCC
Q psy8640 156 LNYSIISAAA 165 (303)
Q Consensus 156 i~Y~i~~~~~ 165 (303)
+.|....+..
T Consensus 157 V~~~T~dGTA 166 (298)
T 3rb5_A 157 VPYWTENDTA 166 (298)
T ss_dssp EEEEEEEC--
T ss_pred EEEEecCCcc
Confidence 7787766653
No 68
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=43.12 E-value=63 Score=23.64 Aligned_cols=53 Identities=17% Similarity=0.225 Sum_probs=38.1
Q ss_pred EEeCCccE----EEEcccCCCCCCCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEEcCCCCCC
Q psy8640 60 AVDPLTGV----LSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQDENDNAP 119 (303)
Q Consensus 60 ~Id~~tG~----l~~~~~LD~E~~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~DvNDn~P 119 (303)
..|...|. |.+...+|-.+.-. |.++..++|... ...+.+.+|.|.+..+..|
T Consensus 35 A~D~~DGDlT~~I~V~g~Vdt~k~G~-Y~VtY~VtDs~G------n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 35 AIDKEDGDLTSKIKVDGEVDTTKAGT-YVLTYTVTDSKG------HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EECSSSCBCGGGCEEESCCCSSSCEE-EEEEEEEECTTS------CEEEEEEEEEEECSSCCCC
T ss_pred EEcCCCCCcceeEEEeCcccCCCceE-EEEEEEEEcCCC------CEEEEEEEEEEeCCCcccC
Confidence 45555554 45567788888778 999999999753 4667788888887555433
No 69
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=40.82 E-value=61 Score=30.23 Aligned_cols=43 Identities=21% Similarity=0.351 Sum_probs=32.7
Q ss_pred CCccEEEEcccCCCCCCCceEEEEEEEEECCCCCCCCCCeeEEEEEEEE
Q psy8640 63 PLTGVLSVQQPLDYDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITL 111 (303)
Q Consensus 63 ~~tG~l~~~~~LD~E~~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V 111 (303)
+.+..++...+-+ +.... |+|.++++|++. |++++..++.|+|
T Consensus 394 ~~~~~~sft~P~~-~~~~t-l~f~LtVTD~~~----p~lTs~~rViVtV 436 (437)
T 2yhg_A 394 SSSASANVQIPSN-AGGKD-IHILLTLRDNGS----PNLYAYRRVVINV 436 (437)
T ss_dssp TTSSEEEEECCTT-CTTCE-EEEEEEEEECSS----SCCEEEEEEEEEE
T ss_pred CCCceEEEEeCCC-CCCcE-EEEEEEEEeCCC----CCccEEeEEEEEe
Confidence 3445666665544 34556 999999999997 7899999999987
No 70
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=36.87 E-value=46 Score=28.71 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=24.9
Q ss_pred eecEEEEEEEEEECCCCeEEEEEEEEEeecC
Q psy8640 237 ARSRYAFTLLSTDSGGRTCKVKVRVEIESRD 267 (303)
Q Consensus 237 ~~~~y~l~V~a~D~g~~s~~~~v~I~V~DvN 267 (303)
+.+.|.+++.++|..+.+++.+..|.|....
T Consensus 67 ~~GtYtVtLTVtD~~G~s~t~t~~ItV~~~~ 97 (260)
T 2c4x_A 67 NPGTYKVKLIVTDNQGASSSFTATIKVTSAT 97 (260)
T ss_dssp SCEEEEEEEEEEETTSCEEEEEEEEEEBCSS
T ss_pred CCEEEEEEEEEEeCCCCeEEEEEEEEECCCC
Confidence 3444999999999888877888888887654
No 71
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=31.81 E-value=89 Score=21.65 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=19.4
Q ss_pred eeecEEEEEEEEEECCCCeEEEEEEEEEe
Q psy8640 236 EARSRYAFTLLSTDSGGRTCKVKVRVEIE 264 (303)
Q Consensus 236 E~~~~y~l~V~a~D~g~~s~~~~v~I~V~ 264 (303)
...+.|.+++.+++ |..++.+...|.|.
T Consensus 52 ~~~G~YtV~Ltv~~-g~~~~~a~~~V~V~ 79 (80)
T 1b4r_A 52 VLPGRYHVTAVLAL-GAGSALLGTDVQVE 79 (80)
T ss_dssp CSSEEEEEEEEEEC-SSCEEEEEEEEEEB
T ss_pred CCCcEEEEEEEEEe-CCceEEEEEEEEEE
Confidence 34455999999995 55566666666663
No 72
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=26.00 E-value=1.4e+02 Score=20.32 Aligned_cols=30 Identities=20% Similarity=0.343 Sum_probs=21.6
Q ss_pred CCCCCceEEEEEEEEECCCCCCCCCCeeEEEEEEEEE
Q psy8640 76 YDTGSSEHLLILKVEDGGKPPLDSPLSSITHLKITLQ 112 (303)
Q Consensus 76 ~E~~~~~~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~ 112 (303)
|...-. |.+++.++|... .+.+.++.|.|.
T Consensus 55 y~~~G~-Y~v~LtVtd~~G------~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGT-YNVTLKVTDDKG------ATATESFTIEIK 84 (85)
T ss_dssp CSSCEE-EEEEEEEEETTS------CEEEEEEEEEEE
T ss_pred cCCCeE-EEEEEEEEECCC------CEEEEEEEEEEc
Confidence 344456 999999999753 566777777775
No 73
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.96 E-value=45 Score=24.99 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=19.0
Q ss_pred EEEEEEEEEECCCCeEEEEEEEEEee
Q psy8640 240 RYAFTLLSTDSGGRTCKVKVRVEIES 265 (303)
Q Consensus 240 ~y~l~V~a~D~g~~s~~~~v~I~V~D 265 (303)
.|.|.|.++|..+ ..+..+.|+|+-
T Consensus 81 ~Y~FqltVtd~~~-~ge~~vnVTV~P 105 (113)
T 2e7m_A 81 LYVFKVTVSSENA-FGEGFVNVTVKP 105 (113)
T ss_dssp EEEECCEEEETTE-EEECCEEEEEEC
T ss_pred EEEEEEEEECCCC-CccceEEEEEcC
Confidence 3999999999877 556666666653
No 74
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=20.81 E-value=1.4e+02 Score=21.41 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=18.6
Q ss_pred EEEEEEEEECCCCCCCCCCeeEEEEEEEEEc
Q psy8640 83 HLLILKVEDGGKPPLDSPLSSITHLKITLQD 113 (303)
Q Consensus 83 ~~l~i~a~D~g~~~~~~~~s~~~~v~I~V~D 113 (303)
|+|.++|+|... ....+..+.|.|.+
T Consensus 63 htl~a~AtD~~G-----~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 63 HEISVIAYDDDD-----AASTPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEEETTC-----CBCCCEEEEEEEEC
T ss_pred EEEEEEEEECCC-----CEEeeeEEEEEECc
Confidence 999999999853 23445667777763
Done!