BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8644
(173 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P L G CN T++VEDQNDN+P+F YS +IPED + T + V A+DADLG N ++
Sbjct: 1226 SPVALQGACNLTVMVEDQNDNDPVFDTGHYSATIPEDASIDTSIIKVRATDADLGFNKRI 1285
Query: 143 SWNEL-EPNGLFSSD 156
++ E GLF D
Sbjct: 1286 VYSLANESQGLFRID 1300
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + + V D NDN+P F + Y + E+ VG V +SA+DAD+G N+ + ++
Sbjct: 480 PLSTTASLIVNVVDANDNDPAFSQASYEFLVEENQKVGAFVGKISATDADIGDNAVIKYS 539
Query: 146 ELEPNGLF 153
N F
Sbjct: 540 LFPSNTSF 547
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 91 CNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
CN I + D+NDN P FPVS+Y +I E+ VGT V A+D D G L+++ +
Sbjct: 2070 CNAVFIKVQILDENDNTPTFPVSEYFETIGENERVGTSVFTARATDLDKGKYGILNYS-I 2128
Query: 148 EP 149
EP
Sbjct: 2129 EP 2130
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL-GV-NSKLSWN--ELEPN 150
+ V D NDN P+F S + LS+ EDV +G + ++ +DADL G NS + +N + N
Sbjct: 1969 VTVTDANDNAPVFSTSDFDLSVSEDVKIGHTLTQLTINDADLYGTPNSAVVFNITSGDDN 2028
Query: 151 GLFSSDLRV-EWVINRSVDQHTNK 173
LF +N+S+D T K
Sbjct: 2029 NLFYIHPTTGSLTVNKSLDYDTGK 2052
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G C + + DQND+ P F QY ++ E G V +SA D D G N+++ ++
Sbjct: 1549 LYGYCQVIVNLLDQNDHAPRFTQQQYIANVLEGNTKGEFVVQLSAKDGDRGANARILYHI 1608
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FSS ++ V++R +
Sbjct: 1609 VDGNHDNAFIIEPAFSSSVKTNIVLDREI 1637
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 76 NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
N + NP P I +ED NDN P F S +S+ E +G++V A+D D
Sbjct: 258 NVRAATGNP-PSYDQTQVQITLEDVNDNVPEFGTSSVRVSVAESAQIGSIVYAARATDED 316
Query: 136 LGVNSKLSWNELEPNG 151
G N +++ + G
Sbjct: 317 EGKNGMVTYQLVSATG 332
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+E+WL VE T + LV + I V D NDN P F VS +S+ + GT+ Q
Sbjct: 891 KEYWLVVEATDLATNVSERLVTSATVHISVLDANDNTPTF-VSADKVSVTLNTLSGTLYQ 949
Query: 128 VVSASDADLGVNSKLSW 144
+ A D+D G N +LS+
Sbjct: 950 AL-AVDSDSGENGRLSY 965
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
PAF+ S+ I L R +R E + L V T NP + GT I
Sbjct: 1621 PAFSSSVKTNIV------------LDREIR-ETYKLTVIATDE--GNP-QMTGTATLRIN 1664
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P FP +S+ E VG+V+ V+A+D D L + ++ + FS D
Sbjct: 1665 VVDINDNQPTFPPPNV-ISVSEGTEVGSVLTSVTANDVD--TYPALKYAIVDGDNTFSID 1721
Query: 157 -LRVEWVINRSVDQHTNK 173
+ V+NR +D K
Sbjct: 1722 RYSGKIVLNRPLDYENKK 1739
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+I+ D NDN PIF + + P G + VSA+D D+G+N+++ + L+
Sbjct: 1343 VIINDVNDNKPIFTKYPFREQMATLTPPGQSLLRVSATDNDIGINAEILYELLD 1396
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N T++V +D NDN+P+F Y+ ++ E V T + V A D D G N+++++ +
Sbjct: 375 SANLTLVVDVQDINDNSPVFEHDTYTANVLESDAVKTKILEVQAIDKDTGNNARITYRVV 434
Query: 148 EPNGLFSSDLRVE----WV-INRSVDQHT 171
N +V+ WV + +++D+ +
Sbjct: 435 SENNTNEEHFKVQPSTGWVYLAKALDRES 463
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 97 VEDQNDNNPIFPV-SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLF 153
V D NDN+P F + S Y+L++PE+ V+ V+A+D D+G N ++++ N F
Sbjct: 1135 VLDVNDNSPTFKIGSCYTLTVPENNE-PEVIHTVTATDKDIGANGVITYSISSGNNGNKF 1193
Query: 154 SSDLRVEWVINRSVDQHT 171
+ D + +++D+ T
Sbjct: 1194 TIDATTGKLTAKTLDRET 1211
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+++ + P G CN TI VEDQNDN P F +S+Y+ S+ ED
Sbjct: 1907 RPLDREQHSRYTLQIQASDR--GQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1964
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT V +SA DADLGVN++L ++
Sbjct: 1965 APLGTSVVQISAVDADLGVNARLVYS 1990
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 590 PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 648
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 261 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 319
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 320 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 357
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1135 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1194
Query: 149 PNGLF 153
N F
Sbjct: 1195 INSSF 1199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + +++++
Sbjct: 910 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYS 969
Query: 146 ELEPN--GLFSSDLRVEWVI 163
++ + GLF+ D R +I
Sbjct: 970 LVKESGKGLFAIDARSGHLI 989
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R +++E L++ SN P I V D NDN P +P L + E
Sbjct: 1441 LDREVQSE-FRLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1498
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
PVGT++ +A+DAD G N L +
Sbjct: 1499 PVGTIIHNFTATDADTGTNGDLQY 1522
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L ++
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2361
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS +R V++R +
Sbjct: 2362 VDGNHDNAFVIEPAFSGIVRTNIVLDREI 2390
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1998 QFAIDGQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 2054
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
PIF Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2055 PIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRI 2109
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 1017 STNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1076
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1077 DAGVDNVTNSISSSDVSQHFGI 1098
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN P FP+++Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2841 PLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2900
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++
Sbjct: 1835 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYS 1885
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D+ S + ++ +P+G FS
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFS 876
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+++ + P G CN TI VEDQNDN P F +S+Y+ S+ ED
Sbjct: 1854 RPLDREQHSRYTLQIQASDR--GQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1911
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT V +SA DADLGVN++L ++
Sbjct: 1912 APLGTSVVQISAVDADLGVNARLVYS 1937
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 537 PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 595
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 208 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 266
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 267 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 304
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1082 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1141
Query: 149 PNGLF 153
N F
Sbjct: 1142 INSSF 1146
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + +++++
Sbjct: 857 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYS 916
Query: 146 ELEPN--GLFSSDLRVEWVI 163
++ + GLF+ D R +I
Sbjct: 917 LVKESGKGLFAIDARSGHLI 936
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R +++E L++ SN P I V D NDN P +P L + E
Sbjct: 1388 LDREVQSE-FRLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1445
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
PVGT++ +A+DAD G N L +
Sbjct: 1446 PVGTIIHNFTATDADTGTNGDLQY 1469
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L ++
Sbjct: 2249 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2308
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS +R V++R +
Sbjct: 2309 VDGNHDNAFVIEPAFSGIVRTNIVLDREI 2337
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1945 QFAIDGQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 2001
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
PIF Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2002 PIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRI 2056
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 964 STNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1023
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1024 DAGVDNVTNSISSSDVSQHFGI 1045
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN P FP+++Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2788 PLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2847
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++
Sbjct: 1782 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYS 1832
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D+ S + ++ +P+G FS
Sbjct: 772 PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFS 823
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+++ + P G CN TI VEDQNDN P F +S+Y+ S+ ED
Sbjct: 1854 RPLDREQHSRYTLQIQASDR--GQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1911
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT V +SA DADLGVN++L ++
Sbjct: 1912 APLGTSVVQISAVDADLGVNARLVYS 1937
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 537 PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 595
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 208 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 266
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 267 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 304
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1082 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1141
Query: 149 PNGLF 153
N F
Sbjct: 1142 INSSF 1146
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + +++++
Sbjct: 857 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYS 916
Query: 146 ELEPN--GLFSSDLRVEWVI 163
++ + GLF+ D R +I
Sbjct: 917 LVKESGKGLFAIDARSGHLI 936
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R +++E L++ SN P I V D NDN P +P L + E
Sbjct: 1388 LDREVQSE-FRLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1445
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
PVGT++ +A+DAD G N L +
Sbjct: 1446 PVGTIIHNFTATDADTGTNGDLQY 1469
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L ++
Sbjct: 2249 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVSQVHAFDSDAGSNARLRYHI 2308
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS +R V++R +
Sbjct: 2309 VDGNHDNAFVIEPAFSGIVRTNIVLDREI 2337
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1945 QFAIDGQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 2001
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
PIF Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2002 PIFERYPYIGQVPALIQPGQTLLKVQAIDADLGANAEIVYSLNAENSAVSAKFRI 2056
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 964 STNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1023
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1024 DAGVDNVTNSISSSDVSQHFGI 1045
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LSIPE+ G V+ V ASD D G N+ L ++
Sbjct: 1782 ITVGDVNDNSPEFRPGSCYGLSIPENSEPG-VIHTVVASDLDEGPNADLIYS 1832
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN P FP+++Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2788 PLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2847
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D+ S + ++ +P+G FS
Sbjct: 772 PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFS 823
>gi|449676278|ref|XP_004208594.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Hydra magnipapillata]
Length = 919
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + KNV L R +++ +L + KG +PG L T I +ED NDN P
Sbjct: 195 FEIDEKTGVIKNVQILDREIKS--FYLLYVKAEDKGVDPGSLFATVLVNITLEDINDNKP 252
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
F S++ +++PED PV V+ V+A+DAD G+N K+ + L
Sbjct: 253 TFSKSKFVITLPEDTPVNQVILNVTATDADSGLNGKIEYRRL 294
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H +++ + PG N TI + D N+N P F S +L + EDVP+GT++ +
Sbjct: 508 HCFQIDAFSGEDQQPG----FANLTINIYDANNNYPRFAESIVTLMVAEDVPIGTIIGKI 563
Query: 130 SASDADLGVNSKLSW 144
+A+D D G N+K+S+
Sbjct: 564 TATDDDSGDNAKISY 578
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 43 IAKFIANPTTR--LYKNVGTLKRALRTEE-----HWLKVENTKHKGSNPGPLVGTCNTTI 95
I+ F+ NP L K+ G L L + + L +E H P L T I
Sbjct: 576 ISYFLQNPDENFLLNKDTGELYTQLNLDREKKLSYQLIIEAVDH--GKPVSLSSTTTVII 633
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ D NDN P F Y + I E V +G+ V VSA D D G+N +S++ +E +G
Sbjct: 634 RLIDVNDNAPKFVKDNYDVEILESVAIGSFVTTVSAIDDDDGINKLISYS-IESSG 688
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L+ I + D NDN+PIF + Y +I E+ P+ + V ASD D G+NS++ +
Sbjct: 126 LIAYTTVKISILDINDNHPIFSMPAYLKTIKEEQPLNQFILTVQASDNDFGINSEIKY 183
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV-QVVSASDADLGVNSKLSWNEL 147
+IVED NDN+PIF Y SI E +GT+V ++A D D G N +++++ L
Sbjct: 345 VIVEDVNDNSPIFTRRSYKTSISESSEIGTIVFNKLTAKDDDSGENGRVTYSFL 398
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G CN T+ VEDQNDN P F +S+Y+ S+ ED P GT V ++ASDADLGVN++L ++
Sbjct: 1933 GHCNITVFVEDQNDNAPRFELSKYTASVQEDAPPGTRVAQITASDADLGVNARLVYS 1989
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + + + D NDN PIF S Y++S+ E+ PVG + +SASD D GVN+ +++
Sbjct: 587 PLSSSATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKISASDPDCGVNAMVNY 645
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 258 GGSP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 316
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+ +D T +
Sbjct: 317 LVEYAINRRQSDKEKMFRIDPRTGAIYINKPLDFETKE 354
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLV-GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL E + + T N P I V D NDN+P F ++Y I E++
Sbjct: 1104 RALLDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEENLR 1163
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
G+VV VV+A+D DLG N+ + ++ L N F
Sbjct: 1164 RGSVVGVVTATDLDLGENAAVRYSLLTANSSF 1195
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F + +S+PE+ +G + A D D G + +++++
Sbjct: 907 PVYGHTQVNIEVEDVNDNAPEFETNMVRISVPENAELGAPLYAAHAHDRDSGSSGQVTYS 966
Query: 146 ELEPNG--LFSSDLRV-EWVINRSVDQHTNK 173
+G LFS D R V++ +D T++
Sbjct: 967 LARDSGKRLFSIDARSGHLVLSHHLDYETSQ 997
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 12 YNHWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRT---- 67
Y S+S L R LH P+S + + + + K +N TTR + + + LR
Sbjct: 2234 YATPSMSALNRGRALHYDPESELESESEESLM-KDDSNNTTRSQRALTSSSFDLRNTQPN 2292
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H + V + ++ L + +ED+NDN+P F ++ ++ E GT V
Sbjct: 2293 EIHLVLVA----RSADAPFLAAYAELVVELEDENDNSPQFSQRKFVATVSEGNNKGTFVA 2348
Query: 128 VVSASDADLGVNSKLSWNELEPNG--------LFSSDLRVEWVINRSV 167
V A DAD G N++L ++ ++ N FS ++ V++R +
Sbjct: 2349 QVQAFDADAGANARLRYHIVDGNHDNAFIIEPAFSGIVKTNIVLDREI 2396
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + + D+NDN P FP+S+Y + E+ PVG+ V ASD D G +L+
Sbjct: 2846 PRPLCSLQPFRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAQASDLDRGPFGQLN 2905
Query: 144 WN 145
++
Sbjct: 2906 YS 2907
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
++ H L V T G P PL + V+D NDN P+F +Y +++ E + T +
Sbjct: 996 SQRHTLTV--TATDGGIP-PLSSNLTILLDVQDVNDNPPVFEREEYFVNVSESRSINTQI 1052
Query: 127 QVVSASDADLGVNSKLSW 144
V+ASD D G N+++++
Sbjct: 1053 IQVNASDLDTGNNARITY 1070
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R +++E L++ SN P I V D NDN P + L E
Sbjct: 1437 LDREVQSE-FKLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPKWAQDPIDLQAKETT 1494
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
PVG+++ +A+DAD G N +L + L
Sbjct: 1495 PVGSIIHNFTATDADTGTNGELQYRLL 1521
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 88 VGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V T TI ED NDN P F P S Y LS+PE+ G V+ V A D D G N+ L ++
Sbjct: 1829 VATVQVTI--EDVNDNAPEFRPGSCYGLSVPENTEPG-VIHTVVAIDLDEGPNADLVYS 1884
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQND 102
+ F +P T L R LR E + L VE + +G+ P+ +I V D ND
Sbjct: 1193 SSFQVHPVTGEISTREPLDRELR-EMYELIVE-ARDQGT---PVRSARVPVSIRVTDVND 1247
Query: 103 NNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSD 156
N+P Q + S+ E+ P GT V + A D D G N+ ++++ + + +GLFS D
Sbjct: 1248 NSPEIADPQEDVVSVREEQPPGTEVVRIRAIDRDNGQNASITYSIVKGRDSDGHGLFSID 1307
Query: 157 LRVEWVINRSVDQHTNK 173
+ + R V H +
Sbjct: 1308 PKTGMIRTRVVLDHEER 1324
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D S + ++ +P+G FS
Sbjct: 822 PIFEKARYNYYVKEDIPRGTVVGSVIATSGDTAHRSPMRYSIYSGDPDGYFS 873
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEHW---LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R+L E+H L+++ + P G CN ++ VEDQNDN P F +S+Y S+PED
Sbjct: 1950 RSLDREQHARYTLQLQASDR--GQPITQQGHCNISVFVEDQNDNEPRFELSKYMASVPED 2007
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+G+ V + ASDADLGVNS+L ++
Sbjct: 2008 AAIGSSVLSIKASDADLGVNSRLVYS 2033
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+
Sbjct: 608 GGQP-PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNA 666
Query: 141 KLSW 144
+++
Sbjct: 667 MVNY 670
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 283 GGTP-PLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 341
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R V IN+ +D T +
Sbjct: 342 LVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKE 379
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ V D NDN+P F Y I E++ G VV VVSASDADLG N+ + ++ L N F
Sbjct: 1181 VRVLDANDNDPKFQRESYEFRIEENLRRGAVVGVVSASDADLGENAAIRYSLLPANSSF 1239
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R L++E L++ SN P I V D NDN P +P L + E +
Sbjct: 1484 LDRELQSE-FRLEIRALDTSASN-NPQSSAITVKIEVADVNDNAPRWPKDPIELEVSESL 1541
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
PVG ++ +A+DAD G N +L + L
Sbjct: 1542 PVGAILHNFTATDADSGTNGELQYRLL 1568
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE+ +G + A D D G + +++++
Sbjct: 932 PVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGAPLFAAHAHDKDSGSSGQVTYS 991
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG----- 151
+ED+NDN+P F Q+ + E GT V V A DAD G N++L ++ ++ N
Sbjct: 2363 LEDENDNSPQFSQRQFVATAWEGNSKGTFVAQVQAFDADEGANARLRYHIVDGNHDNAFV 2422
Query: 152 ---LFSSDLRVEWVINRSV 167
FS +R V++R +
Sbjct: 2423 IEPAFSGIVRTNIVLDREI 2441
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + + D+NDN P FP+ +Y + E+ P+G+ V ASD D G +L+
Sbjct: 2892 PRPLCSLQRFQLSLHDENDNAPQFPLGEYVHFLAENEPLGSSVFRGQASDLDRGAFGQLN 2951
Query: 144 WN 145
++
Sbjct: 2952 YS 2953
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + + V+D NDN P+F +Y++++ E + + V+ASD D G N+++++
Sbjct: 1048 PLSADLSILVDVQDVNDNPPVFERDEYAVNVSESRAINAQIIQVNASDLDTGNNARITY 1106
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 63 RALRTEEHWLKVENTKHKGSNP--GPLVGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPED 119
R T ++ + + S P G I + D NDN P F P + Y LS+PE+
Sbjct: 1844 RMAATPTSAIRKQRSSESNSEPASGQHFDVATLIITIGDVNDNAPEFRPGACYGLSVPEN 1903
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVINRSVDQH 170
+V+ V ASD D G N+++ ++ + N F+ D R + RS+D+
Sbjct: 1904 SE-SSVIHTVVASDLDEGANAEIVYSIIGGNLGNKFNIDARTGELSARSLDRE 1955
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHW--LKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
+F + + L VG L R L++ + L + +++ + G+ I V D ND
Sbjct: 2041 QFAIDSKSGLITTVGKLDRELQSSYSFMVLATDCGRYEVRS-----GSVAVQINVLDIND 2095
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N PIF YS + + G + V A DAD G N +L + + L + +R ++
Sbjct: 2096 NKPIFERYPYSGQVAALIQPGQTLLKVQAHDADQGANGELLYALKADSTLTTPAMRSKFR 2155
Query: 163 IN 164
IN
Sbjct: 2156 IN 2157
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
D PIF ++Y+ + EDVP GTVV V A+ +D S + ++ +P+G FS
Sbjct: 841 DAQQRPPIFEKARYNYYVKEDVPRGTVVGSVIATSSDTAQRSPVRYSIYSGDPDGYFS 898
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVEDQNDNN 104
+ANP + + +RT+ L E G P+ G +IV D+NDN
Sbjct: 135 IVANPGVETDLAIDHISGEIRTKVR-LDRETRASYGLVAIPMSGLNVRVVVIVRDENDNA 193
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
P FP + PE+ P ++ A D DL
Sbjct: 194 PTFPQPAMHIEFPENTPREVKRTLLPARDLDL 225
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G CN TI VEDQNDN P F +S+Y+ S+ ED P+GT V +SA DADLGVN++L ++
Sbjct: 1951 GHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYS 2007
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 590 PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 648
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 261 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 319
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 320 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 357
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1135 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1194
Query: 149 PNGLF 153
N F
Sbjct: 1195 INSSF 1199
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R +++E L++ +N P I V D NDN P +P L + E
Sbjct: 1460 LDREVQSE-FRLEIRALDTTATN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1517
Query: 121 PVGTVVQVVSASDADLGVNSKLSW---------NELEPNGLFSSD 156
PVGT++ +A+DAD G N L + NE + +FS D
Sbjct: 1518 PVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMD 1562
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + +++++
Sbjct: 910 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYS 969
Query: 146 ELEPN--GLFSSDLRVEWVI 163
++ + GLF+ D R +I
Sbjct: 970 LVKDSGKGLFAIDARSGHLI 989
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L ++
Sbjct: 2319 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2378
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS +R V++R +
Sbjct: 2379 VDGNHDNAFVIEPAFSGIVRTNIVLDREI 2407
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 2015 QFAIDSQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 2071
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
P+F Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2072 PVFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRI 2126
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--G 151
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++ N
Sbjct: 1852 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGN 1910
Query: 152 LFSSDLRVEWVINRSVDQHTN 172
FS D R + R +D+ N
Sbjct: 1911 KFSIDSRSGELSARPLDREQN 1931
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 1017 STNLTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1076
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1077 DAGVDNVTNSISSSDVSQHFGI 1098
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN P FP+S+Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2858 PLCSLQPFRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2917
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+++ + P G CN TI VEDQNDN P F +S+Y+ S+ ED
Sbjct: 1907 RPLDREQHSRYTLQIQASDR--GQPKSRQGHCNITIFVEDQNDNAPSFKLSKYTGSVQED 1964
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT V ++A DADLGVN++L ++
Sbjct: 1965 APLGTSVLQINAVDADLGVNARLVYS 1990
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 590 PLSSTATILVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 648
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 261 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 319
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 320 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 357
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1135 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1194
Query: 149 PNGLF 153
N F
Sbjct: 1195 INSSF 1199
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + ++S++
Sbjct: 910 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYS 969
Query: 146 ELEPNG--LFSSDLR 158
+ +G LF+ D R
Sbjct: 970 LVSDSGKRLFAIDAR 984
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P I V D NDN P +P L + E P+GT++ +A+DAD G N L +
Sbjct: 1464 PQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPIGTIIHNFTATDADTGTNGDLQY 1522
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 85 GPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P + T +I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L
Sbjct: 2299 APFLATYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLR 2358
Query: 144 WNELEPNG--------LFSSDLRVEWVINRSV 167
++ ++ N FS +R V++R +
Sbjct: 2359 YHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI 2390
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1998 QFAIDSQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 2054
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
P+F Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2055 PVFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLKAENSAVSAKFRI 2109
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN+P FP+S+Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2841 PLCSLQPFRLELHDENDNDPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2900
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 1017 STNLTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1076
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1077 DAGVDNVTNSISSSDVSQHFGI 1098
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++
Sbjct: 1835 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYS 1885
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D+ S K S +P+G FS
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGDIAHRSPVKYSIYSGDPDGYFS 876
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+++ + P G CN TI VEDQNDN P F +S+Y+ S+ ED
Sbjct: 1907 RPLDREQHSRYTLQIQASDR--GQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1964
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT V ++A DADLGVN++L ++
Sbjct: 1965 APLGTSVLQINAVDADLGVNARLVYS 1990
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+ +++
Sbjct: 590 PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNY 648
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D N
Sbjct: 261 GGTP-PLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENG 319
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R + IN+++D T +
Sbjct: 320 LVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKE 357
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 1135 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 1194
Query: 149 PNGLF 153
N F
Sbjct: 1195 INSSF 1199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + ++S++
Sbjct: 910 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYS 969
Query: 146 ELEPNG--LFSSDLRVEWVI 163
+ +G LF+ D R +I
Sbjct: 970 LVGDSGKRLFAIDARSGHLI 989
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 85 GPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P + T +I +ED+NDN+P F Q++ ++ E GT V V A D+D G N++L
Sbjct: 2299 APFLATYAELVIELEDENDNSPKFSQKQFAATVSEGNNKGTFVAQVHAFDSDAGSNARLR 2358
Query: 144 WNELEPNG--------LFSSDLRVEWVINRSV 167
++ ++ N FS +R V++R +
Sbjct: 2359 YHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI 2390
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P I V D NDN P +P L + E PVGT++ +A+DAD G N L +
Sbjct: 1464 PQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQY 1522
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1998 QFAIDSQSGLITTVGKLDRELQASYNFMVL---AMDGGRYEVRSATVPVQINVLDINDNR 2054
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
P+F Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 2055 PVFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRI 2109
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN+P FP+S+Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2841 PLCSLQPFRLELHDENDNDPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2900
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++ +
Sbjct: 1017 STNLTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1076
Query: 148 EP------NGLFSSDLRVEWVI 163
+ N + SSD+ + I
Sbjct: 1077 DAGVDNVTNSISSSDVSQHFGI 1098
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++
Sbjct: 1835 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYS 1885
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + ED+P GTVV V A+ D+ S + ++ +P+G FS
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGDIAHRSPVRYSIYSGDPDGYFS 876
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 47/59 (79%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++G+CN T++VEDQNDN+P F +S+YS +IPED+ + T + V ASDAD+ VN+++ ++
Sbjct: 1973 MMGSCNITVMVEDQNDNDPKFDLSKYSTTIPEDISIDTSIIKVHASDADMSVNARIIYS 2031
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V A+D D G N
Sbjct: 200 GGTP-PLRGEMRVNITIQDVNDNQPIFNQSRYIATVPENATVGTTVLQVFATDKDSGENG 258
Query: 141 KLSWN 145
++ ++
Sbjct: 259 QIEYS 263
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
TL R L T+ H L + T + PL + V+D NDN P+F ++YS S+
Sbjct: 980 TLTRHLDYETTQRHSLIITATD---TGIPPLSANLTVLVEVQDVNDNPPVFERNEYSKSV 1036
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
E PV + + V+A D D G N++L++ L N
Sbjct: 1037 EESRPVNSQILQVTAVDLDTGNNARLTYRLLPGN 1070
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-LGVNSKLSWN 145
+II+ D NDN P+F S Y +I E PVGT ++ A+D D G NS ++++
Sbjct: 2665 SIIIVDTNDNAPVFKQSDYETTISEGTPVGTSIKKFEATDGDSAGPNSDITYD 2717
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T + L LR+ + N + +P P+ G I ++D NDN P
Sbjct: 865 FRIDPSTGAIRTASALDHELRSS----VLLNIQATNGDP-PVYGHTQVNIEIQDVNDNAP 919
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSDLRV-EW 161
F + +S+PE+V G + A D D G N + + N GLF+ D ++
Sbjct: 920 EFESNVVRISVPENVETGIALYAAHARDRDSGANGVVRYKIVNNGATGGLFNVDPKLGHL 979
Query: 162 VINRSVDQHTNK 173
+ R +D T +
Sbjct: 980 TLTRHLDYETTQ 991
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T + V D NDN+P F Y SI E++ G+ V +SA+D D+G+N+ + ++
Sbjct: 1113 LSATAKVLVKVSDANDNDPKFMKESYEFSIEENLRSGSPVGKLSATDEDIGINAVIRYSL 1172
Query: 147 LEPNGLF 153
+ N F
Sbjct: 1173 IPGNTSF 1179
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL +I ++D+NDN P FPVS+Y + E+ +GT V A+D D G L+++
Sbjct: 2764 PLCTLNTFSIELQDENDNEPKFPVSEYLEFVGENESIGTSVFTAHATDLDKGAFGSLNYS 2823
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 85 GPLV-GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
GP++ G C + + D NDN P F QYS S+ E G V V A D D G NS++
Sbjct: 2288 GPVLHGYCEVVMQLTDINDNAPKFTQQQYSASVWEGNKKGAFVLQVVAFDDDEGHNSRIR 2347
Query: 144 WNELEPNG--------LFSSDLRVEWVINRSV 167
++ L+ N FS L+ V++R +
Sbjct: 2348 YHFLDGNHDNAFKIEPEFSGILKTNIVLDREI 2379
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L+V N P I + D NDN+P +P ++S+ E+ +G+
Sbjct: 1528 RESEYRLEVRALDTSAMN-NPQSSAITVRIDIADANDNSPRWPEDLVTISLGENTAIGSS 1586
Query: 126 VQVVSASDADLGVNSKLSWNELE---PNGLFSSD-LRVEWVINRSVDQHT 171
+ +A+D D G N + ++ L N F+ D L +++ S+D T
Sbjct: 1587 IHNFTATDVDSGSNGDVRYHLLHQYPTNDTFTIDTLTGTLILSNSLDYET 1636
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 82 SNPGP-LVGTCNTTIIVEDQNDNNPIFPV-SQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ PG L TI V D NDN P F + S Y L +PE+ + V+ V A D D+G+N
Sbjct: 1863 TTPGKTLFDVATITIEVTDVNDNAPEFKINSCYRLYVPENNDIA-VIHTVVAKDLDVGLN 1921
Query: 140 SKLSWN 145
+++++
Sbjct: 1922 GEITYS 1927
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
+ GT I V D NDN P FP ++ + E VGTV+ V+A+D D N L+++
Sbjct: 2397 MTGTARIVINVVDVNDNQPTFP-PPATIKVSEATEVGTVLTTVAANDVD--TNPTLTYDF 2453
Query: 147 LEPNG 151
+ N
Sbjct: 2454 AKDNA 2458
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R+L E+H L+V+ + P L G CN TI+VEDQNDN P F + +Y +I ED
Sbjct: 1865 RSLDREQHSRYTLQVQASDR--GKPNSLQGQCNITILVEDQNDNAPRFELPKYIANIAED 1922
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+G+ V + A+DADLG+N++L +
Sbjct: 1923 AAIGSSVVRIKANDADLGINARLVY 1947
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P L + + + D NDN PIF S Y+++I E+ P+G + VSASD D GVN+
Sbjct: 546 GGQPA-LSSSATVLVTIHDVNDNEPIFDQSFYNVTIAENEPIGRCILKVSASDPDCGVNA 604
Query: 141 KLSW 144
+++
Sbjct: 605 MVNY 608
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D
Sbjct: 221 GGTP-PLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENSTVGTSVLQVYASDTD----- 274
Query: 141 KLSWNELEPNGLFSSDLRVEWVINR 165
+ NGL VE+ INR
Sbjct: 275 ------ADENGL------VEYAINR 287
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 85 GPLVGTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G T I++ D NDN+P F S Y I E++ G+ V +V ASD DLG N+ +
Sbjct: 1097 GTPAAQAKTRIVIRVLDANDNDPKFKRSNYEFRIEENMRRGSKVGIVQASDLDLGDNAAI 1156
Query: 143 SWNELEPNGLF 153
++ + N F
Sbjct: 1157 RYSLMPQNSSF 1167
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ N TI+V +D NDN P+F +Y+++I E PV T + V+A+D D G N++L++
Sbjct: 983 SSNLTILVDVQDVNDNPPLFERDEYAVNISEVRPVNTQIIQVNATDRDTGNNARLTY 1039
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 69 EHWLKVE---NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+H K + N + S P+ G I VED NDN P F + +S+PE+ +GT
Sbjct: 854 DHEAKAQVLLNIQATSSGDPPVYGHTQVKIEVEDVNDNAPEFETTSVRISVPENAELGTP 913
Query: 126 VQVVSASDADLGVNSKLSW 144
+ A D D G + ++++
Sbjct: 914 LYAAHAKDKDSGKSGQVTY 932
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 67 TEEHWLKVENTKHKGS-NPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
++ H L++ S + GP + + I+ +ED+NDN+P F Q+ ++ E GT
Sbjct: 2251 SQPHELRLVVVARSASPDSGPFLTSYAELIVELEDENDNSPQFSQHQFVATVWEGNSKGT 2310
Query: 125 VVQVVSASDADLGVNSKLSWNELEPNG--------LFSSDLRVEWVINRSV 167
V V A DAD G N++L ++ ++ N FS ++ V++R +
Sbjct: 2311 YVAQVQAFDADAGANARLRYHIVDGNHDNAFVIEPAFSGIVKTNIVLDREI 2361
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
SN P + I V D NDN P +P L++ E VGT++ +A+DAD G N++
Sbjct: 1423 SNNNPQSSSITVKIEVADINDNPPHWPQDPLELNVSEATSVGTIIYNFTATDADAGHNAE 1482
Query: 142 LSWNEL 147
L + L
Sbjct: 1483 LQYRLL 1488
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 91 CNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
I + D ND+ P F P S Y LS+PE+ +V+ V A+D D GVN+ + ++ +
Sbjct: 1789 ATVVITIGDVNDHAPEFRPGSCYGLSVPENSET-SVIHTVVATDLDEGVNADILYSIIGG 1847
Query: 150 N--GLFSSDLRVEWVINRSVD--QHT 171
N FS D R + RS+D QH+
Sbjct: 1848 NLGNKFSIDARTGELSARSLDREQHS 1873
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + + D+NDN P FP+++Y + E+ P+GT + A+D D G +L+
Sbjct: 2813 PRPLCSLQPFHLDLYDENDNEPRFPLTEYIHFLAENEPMGTSIFRAQATDLDRGPFGQLN 2872
Query: 144 WN 145
++
Sbjct: 2873 YS 2874
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD--------LGV 138
+ GT + + D NDN P FP + +S+ E +G+V+ +SA+D D LG
Sbjct: 2379 MTGTATIRVQIVDVNDNQPTFPPNNL-VSVSEATELGSVITSISANDVDTHPTLTYRLGS 2437
Query: 139 NSKLSWNELEPNGLFSSD-LRVEWVINRSVDQHTNK 173
+S ++ E G+F+ D + V+ R +D + +
Sbjct: 2438 DSSVAR---ENQGIFALDRYSGKLVLKRRLDYESQQ 2470
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
D PIF +Y+ + ED P+GTVV V AS +D + ++ +P+G FS
Sbjct: 782 DAQQRPPIFEKQRYNYQVKEDKPMGTVVGSVMASSSDSAQRGGIRYSIYSGDPDGYFS 839
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 86 PLVG-TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
PL G + V+D+NDN P FP S + PE+ P ++ A D DL
Sbjct: 112 PLSGLNVRVVVTVKDENDNAPTFPQSSMYIEFPENTPREVKRTLLPARDLDL 163
>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
Length = 1691
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 63 RALRTEEHW---LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+V+ + P G CN T++VEDQNDN P F + +Y S+ ED
Sbjct: 34 RPLDREQHARYTLQVQASDR--GQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAED 91
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G V + A+DADLGVN++L ++
Sbjct: 92 APLGASVVRIKATDADLGVNARLVYS 117
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + D+NDN P FP+S+Y I E+ PVG+ V ASD D G L
Sbjct: 947 HPRPLCSLQPFHLELHDENDNEPKFPLSEYVHFIAENEPVGSSVFQAHASDLDRGPFGAL 1006
Query: 143 SWNELEPNGLFSSDLRVEWVINRSVDQHT 171
+++ +G SS W + R VD H+
Sbjct: 1007 NYSLAPASGDDSS-----WKLFR-VDSHS 1029
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L++ ++ + G I V D NDN
Sbjct: 125 QFAIDSKSGLITTVGKLDRELQSSYSFMVLAT---DGGRYEVRSARVAVQINVLDVNDNR 181
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+F Y +P + G + V A DAD G+N +L ++
Sbjct: 182 PVFERYPYIGQVPALIQPGQTLLKVQAHDADQGLNGELLYS 222
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 63 RALRTEEHW---LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R L E+H L+V+ + P G CN T++VEDQNDN P F + +Y S+ ED
Sbjct: 1914 RPLDREQHARYTLQVQASDR--GQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAED 1971
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G V + A+DADLGVN++L ++
Sbjct: 1972 APLGASVVRIKATDADLGVNARLVYS 1997
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+
Sbjct: 585 GGQP-PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNA 643
Query: 141 KLSW 144
+++
Sbjct: 644 MVNY 647
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VGT V V ASD D
Sbjct: 260 GGTP-PLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTD----- 313
Query: 141 KLSWNELEPNGLFSSDLRVEWVINR 165
E NGL VE+ INR
Sbjct: 314 ------AEENGL------VEYAINR 326
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 82 SNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ GP++ +C ++ ++D+NDN+P F Q+ ++ E GT V V A D+D G N+
Sbjct: 2300 SSDGPILSSCAELVVELQDENDNSPQFSQRQFVATVSEGNSKGTFVAQVQAFDSDAGANA 2359
Query: 141 KLSWNELEPNG--------LFSSDLRVEWVINRSV 167
+L ++ ++ N FS ++ V++R +
Sbjct: 2360 RLRYHIVDGNHDNAFVIEPAFSGIVKTNIVLDREI 2394
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+ R L E + N + P P+ G I VED NDN P F S +S+PE+
Sbjct: 885 IARPLDHEAKGQVLLNIQATAGEP-PVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENA 943
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-EWVINRSVDQHTNK 173
+G + A D D G + +++++ LF+ D R V+++ +D T++
Sbjct: 944 DLGAPLYAAHAHDKDSGSSGQVTYSLARERQLFAIDPRSGHLVLSQHLDYETSQ 997
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
++ H L V T G P PL + V+D NDN P+F +Y++++ E PV + +
Sbjct: 996 SQRHSLVV--TATDGGVP-PLATNLTILVDVQDVNDNPPVFERDEYAVNVSESRPVNSQI 1052
Query: 127 QVVSASDADLGVNSKLSW 144
V+A+D D G N+++++
Sbjct: 1053 VQVNATDLDTGNNARITY 1070
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ V D NDN+P F QY I E++ G+VV V+A D DLG N+ + ++ L N F
Sbjct: 1141 VRVLDANDNDPRFLRPQYEFRIEENLRRGSVVGAVAARDLDLGENAAVRYSLLPANSSF 1199
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + D+NDN P FP+S+Y I E+ PVG+ V ASD D G L
Sbjct: 2842 HPRPLCSLQPFHLELHDENDNEPKFPLSEYVHFIAENEPVGSSVFQAHASDLDRGPFGAL 2901
Query: 143 SWNELEPNGLFSSDLRVEWVINRSVDQHT 171
+++ +G SS W + R VD H+
Sbjct: 2902 NYSLAPASGDDSS-----WKLFR-VDSHS 2924
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E L++ SN P I V D NDN P +P L + E VG VV
Sbjct: 1453 EFRLEIRALDTTASN-NPQSSAVTVKIEVADVNDNAPHWPRDPVELRLSEATAVGAVVHN 1511
Query: 129 VSASDADLGVNSKLSWNEL 147
+A+DAD G N +L + L
Sbjct: 1512 FTATDADTGTNGELQYRLL 1530
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P P T + ++V+ ++N P F + Y +I E+VP G+ V V+A G N+ LS
Sbjct: 1700 PEPRKSTLSLQLLVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSFHGGDNANLS 1759
Query: 144 WNELEPNGLFSSDLRVEW 161
+ E+ P+G+ V+W
Sbjct: 1760 Y-EI-PSGIAGDLFHVDW 1775
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L++ ++ + G I V D NDN
Sbjct: 2005 QFAIDSKSGLITTVGKLDRELQSSYSFMVLAT---DGGRYEVRSARVAVQINVLDVNDNR 2061
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+F Y +P + G + V A DAD G+N +L ++
Sbjct: 2062 PVFERYPYIGQVPALIQPGQTLLKVQAHDADQGLNGELLYS 2102
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G CN TI VEDQNDN P F +S+Y+ S+ ED P+ T V +SA DADLGVN++L ++
Sbjct: 1333 GHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLSTSVVQISAVDADLGVNARLVYS 1389
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T +IV D NDN+P F S+Y I E++ G+VV VV+ASD DLG N+ + ++ L
Sbjct: 551 AKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLP 610
Query: 149 PNGLF 153
N F
Sbjct: 611 INSSF 615
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
P I V D NDN P +P L + E PVGT++ +A+DAD G N L +
Sbjct: 865 PQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYR 924
Query: 145 --------NELEPNGLFSSD 156
NE + +FS D
Sbjct: 925 LIRYFPQLNESQEQAIFSMD 944
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE +G + A D D G + +++++
Sbjct: 326 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYS 385
Query: 146 ELEPN--GLFSSDLRVEWVI 163
++ + GLF+ D R +I
Sbjct: 386 LVKDSGKGLFAIDARSGHLI 405
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L I +ED+NDN+P F Q+ ++ E GT V V A D+D G N++L ++
Sbjct: 1701 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 1760
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS +R V++R +
Sbjct: 1761 VDGNHDNAFVIEPAFSGIVRTNIVLDREI 1789
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + + L VG L R L+ +++ + G T I V D NDN
Sbjct: 1397 QFAIDSQSGLITTVGKLDRELQASYNFMVLAT---DGGRYEVRSATVPVQINVLDINDNR 1453
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
P+F Y +P + G + V A DADLG N+++ ++ N S+ R+
Sbjct: 1454 PVFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRI 1508
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D+NDN P FP+S+Y + E+ PVG+ V ASD D G +L+++
Sbjct: 2228 PLCSLQPFRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS 2287
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ N TI+V +D NDN P+F +YS+++ E + + V+ASD D G N+++++
Sbjct: 433 STNLTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITY 489
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F P S Y LS+PE+ G V+ V ASD D G N+ L ++
Sbjct: 1234 ITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYS 1284
>gi|444713183|gb|ELW54091.1| Protocadherin beta-16 [Tupaia chinensis]
Length = 521
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE LK+ T G +P P GT I V D NDN P FP S Y
Sbjct: 167 RKYPELVLDKELDREEEPELKLTLTALDGGSP-PRTGTTQVFIEVVDVNDNAPEFPHSLY 225
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ +PE+ PVG++V VSASD D G N K+S++ +P+ S L +
Sbjct: 226 KVQMPENSPVGSLVVTVSASDLDSGANGKVSYSLFQPSEDTSKTLEI 272
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 46 FIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
FI NP+ + + + T KRAL R + + T P L + T++V D NDN
Sbjct: 369 FILNPSVKNFYTLET-KRALDRESQAEYNITITVTDLGTPR-LTTEHSITVLVSDVNDNA 426
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
P F + Y+L + E+ + +SA+DAD G N++++++ L P
Sbjct: 427 PAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPP 471
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 65 LRTEEHWLKVEN--TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV 122
LRT+ + V++ K + G G C + V D NDN P+ +S + IPE+ P
Sbjct: 281 LRTQLDFETVQSYEVDIKAKDGGGHSGKCTLLLQVVDVNDNRPVVTMSALTSPIPENAP- 339
Query: 123 GTVVQVVSASDADLGVNSK 141
TVV V S SD D G N K
Sbjct: 340 ETVVAVFSVSDPDSGNNGK 358
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
VED ND++P+F + SL I E+ P+G V + +A D D+G N+ ++ ++ PN F
Sbjct: 101 VEDINDHSPVFTEREMSLQILENSPLGNVFPLNNALDLDVGCNNVQNY-KISPNPYFRVL 159
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 160 TRERSDGRKYPELVLDKELDRE 181
>gi|410948513|ref|XP_004001537.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5-like [Felis
catus]
Length = 733
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + KR R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKRLDREQQSYHRLVLTAMDGGDP-PLSGTTELRIQVTDANDNPPVFNQDMYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+PE+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLPENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQVFS 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 55 YKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
YK V GTL R +T E+ + + T PL + + T+I+ D NDN P+F + Y
Sbjct: 398 YKLVIDGTLDRE-QTPEYNVTITATDR---GKPPLSASKSVTLIITDINDNAPVFLQASY 453
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ + E+ P G + VSASD DLG + +S+ ++LEP L S
Sbjct: 454 MVHVMENNPPGASIAQVSASDPDLGPSGHVSYSIVASDLEPRALAS 499
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ ++ +ED ND+ P F + + L I E GT + +A DAD+G+NS
Sbjct: 118 HVSVDIEDINDHTPKFTQTSFELQISESTVPGTRFILEAAEDADIGLNS 166
>gi|405976645|gb|EKC41145.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1550
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 6 IGKGYEYNHWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL 65
IG + +IS LE++ L YA S KF N T +G L R
Sbjct: 815 IGTSVFDSDATISGALENKDLS-------YAITAGNSDGKFAVNEYTGQLSVIGNLDRD- 866
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T + + + + + + V T+ + D NDN PIF VS+YS +IPED P+ +V
Sbjct: 867 TTASYDITITSVNMQQNTLRDFV---TVTVTLSDINDNKPIFSVSKYSFTIPEDSPINSV 923
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V ++ASD D G NS +S++ + +G FSSD ++
Sbjct: 924 VGTLTASDKDTGTNSAISFSII--SGEFSSDFIID 956
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 38 AFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTC 91
A +FSI + FI + +T + K L LR+ + L V+ G P L T
Sbjct: 939 AISFSIISGEFSSDFIIDSSTAVLKVNSVLNAPLRSS-YALIVQ--AVDGGTPS-LASTV 994
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
II+ D NDN+PIF + + + E + + + + V A+DAD G N++L+++ L NG
Sbjct: 995 EVDIIITDINDNSPIFSPTTVIVKVNEMLNISSALYSVHATDADAGANARLTYSILSGNG 1054
Query: 152 LFSSDLR 158
DLR
Sbjct: 1055 ----DLR 1057
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 32 SGMYAPAFTFSI----AKFIANPTT-RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGP 86
+G + T+SI + F P T R+Y G L R T + ++ +
Sbjct: 89 AGTFDADITYSIEDTTSVFGIEPKTGRIYLAKGELDR--ETLDSYIISVSAFSSNQEAAK 146
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++GT T+ V D NDN P F S Y +++PE+ V + V+A D DLG N ++S++
Sbjct: 147 ILGTV--TVAVLDTNDNKPTFSQSSYQVTVPENTGVNLGILTVTAQDPDLGTNGQISYS 203
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-LGVNSKLSWNELEPNG- 151
T+ V D NDN P F + Y SI E++ VGT++Q ++A+D D G NS +S++ N
Sbjct: 478 TVTVVDNNDNPPTFGSTFYETSIAENIGVGTLIQDLAATDIDSAGPNSAMSYSIASGNAE 537
Query: 152 -LFSSDLRVEWVINRSVDQHTNK 173
F D + ++ ++D T K
Sbjct: 538 SKFEIDTSGQLKLSATLDAETTK 560
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 61 LKRALRTEEHW-----LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL- 114
+ RA+ EE +++++T + G LV N + V D NDN P F S +
Sbjct: 1273 VARAIDHEERINYFLTVQIQDTVNTG-----LVYNKNVNVKVNDLNDNTPTFQSSTITFT 1327
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
++ E+ PVG + V A+DAD +N ++++ E++P+
Sbjct: 1328 AVVENSPVGLTIGQVPATDADSDLNGQVTY-EIDPS 1362
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ + D NDN+P+F + Y+ + E+ P+G V V+ +D D GVN L+ + + N
Sbjct: 686 LTITDVNDNDPVFSQNVYTGQVIENYPIGGSVTRVTCTDTDSGVNKDLTLSIVAGN 741
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPV---SQYSLSIPEDVPVGT 124
++ LK+E + P P T T + V +DN P++ YS SI E+ VGT
Sbjct: 20 QYSLKIEVVD---AGPAPAQTTTLTVAVYVTGIDDNVPVWEAPNSGTYSTSISENSGVGT 76
Query: 125 VVQVVSASDADLG 137
+VQ++SA+DADL
Sbjct: 77 LVQLISATDADLA 89
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G+ I V D NDN+P F YS+++ PVGT + ++ +D D+ N+ + +
Sbjct: 1097 GSLTLCIEVMDANDNSPYFIGEPYSITLGRASPVGTYLTTITGNDTDIMDNAVIEY 1152
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 57 NVGTL-KRALRTEEHWLKV-ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
N G L R L E H V + T +P G CN T+ VED+NDN+P F + +Y
Sbjct: 1512 NTGALTARPLDREIHARYVLQITAQDRGSPTSHQGHCNITVRVEDENDNDPKFELQKYIA 1571
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+I ED P+GT V V A DAD+G+N+++ ++
Sbjct: 1572 TIDEDAPIGTTVLTVKAVDADIGINARIVYS 1602
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T + + V D NDNNPIF Y I E++ G+V+ +++A+DAD G+N+ + ++
Sbjct: 766 LTATTHVIVSVLDANDNNPIFAKQLYEFQIEENMRRGSVIGLITATDADAGINAVVRYSL 825
Query: 147 LEPNGLF 153
+ N F
Sbjct: 826 IPSNTSF 832
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ N TI+VE D NDN P+F S+Y++ + E P + + V+A DAD G N++L++ L
Sbjct: 646 STNLTILVEVQDVNDNAPVFERSEYAIKVSESTPSNSQIMQVTAVDADTGNNARLTYRIL 705
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 63 RALRTEEHWLKVE---NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R T +H K + N + +P P G I +ED NDN P F S +S+PE+
Sbjct: 512 RVASTLDHETKPQVLLNIQATSGDP-PAYGHTQVNIDIEDVNDNPPEFESSTVRISVPEN 570
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNG-----LFSSDLR 158
V +G+ + +A D D G++ +++ L NG LFS D R
Sbjct: 571 VEIGSPLYAANAHDKDSGMSGVITY-RLSNNGPATGNLFSIDSR 613
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G C+ ++++D+NDN P F QYS S+ E G V V+A D D G N+ + ++
Sbjct: 1867 LYGYCSIKVVLQDENDNAPRFTQQQYSASVWEGNNKGEFVIKVNAFDTDQGSNAHILYHI 1926
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS ++ V++R +
Sbjct: 1927 VDGNHDNAFIIEPAFSGIVKTNIVLDREI 1955
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 47 IANPTTRLYKNVGTL--KRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
IA + +N G L R+L E E+ +++ SN P I + D N
Sbjct: 1051 IAEGAFDIDRNSGKLVVARSLDREQQSEYRMEIRALDTSASN-NPQSSAVTVKIEIADVN 1109
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
DN P +P ++ I ED VG+VV +A+D D G N+++ +N +P
Sbjct: 1110 DNPPKWPSDPMNVYISEDAAVGSVVFNFTATDNDSGTNAEIKYNISKP 1157
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL-- 136
+KG N + TI VED NDN P F Y ++I E P+ + +SA DADL
Sbjct: 2311 YKGMN---MSSAIRVTITVEDANDNAPEFQPGPYEVAISETAPIKYSIGQISAVDADLLN 2367
Query: 137 GVNSKLSWNELEPN--GLFSSDL 157
NS++ + + N G FS DL
Sbjct: 2368 SPNSEVVYQIVSGNDGGWFSIDL 2390
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 97 VEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLF 153
+ D ND+ P F P S Y L++PE+ + +V+ V ASDAD G+N +++++ N F
Sbjct: 1449 ITDVNDHAPEFLPGSCYPLAVPENSEL-SVIHTVVASDADEGLNGEITYSISGGNIGNKF 1507
Query: 154 SSDLRVEWVINRSVDQH 170
S D+ + R +D+
Sbjct: 1508 SIDMNTGALTARPLDRE 1524
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I + D+NDN P FPV +Y + E+ P+G + A+D D G +++++
Sbjct: 2432 INLTDENDNEPQFPVPEYLEFVGENEPIGISIFTARATDMDRGEYGRVNYS 2482
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
P+ F+I T +L+ N+ + R R+ +L + T S PL + +
Sbjct: 2161 PSIGFAIDAL----TGQLFVNMSQVHRT-RSGTLYLTITATD---SGVPPLSSSTTVRLE 2212
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
++ ++ NP F SQY LSI ED P G+V+
Sbjct: 2213 MKSKSKANPHFIQSQYRLSINEDAPTGSVI 2242
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 95 IIVEDQNDNNP-IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-----E 148
I + D NDN+P I + +S+ E+ P+GT V V A D D GVN+ ++++ L +
Sbjct: 877 IKILDVNDNSPEIVDPQEDVVSVREEQPIGTEVVRVRAIDRDYGVNASITYSILKGRDSD 936
Query: 149 PNGLFSSD 156
+G+F+ D
Sbjct: 937 GHGMFTID 944
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP----VGTVVQVVSASDADL 136
++ G L T I + D NDN P F +Y++S+ E +P + T V V+ A+D+D
Sbjct: 317 ATDRGGLSTTAMVKIQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVVIVATDSDS 376
Query: 137 GVNSKLSWNELEPN--GLFSSD 156
G +S+ + N G+F D
Sbjct: 377 GSFGTISYRIVAGNEAGIFRMD 398
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T NP L G+CN TI+V+D+NDN+P F +Y+ SIPED+ + V V A DAD
Sbjct: 1210 TAQDRGNPTSLQGSCNITIVVDDENDNDPQFSQQKYTASIPEDILPNSDVLTVHAVDADT 1269
Query: 137 GVNSKLSW 144
G+NSK+ +
Sbjct: 1270 GINSKIFY 1277
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 39 FTFSIAKFIANPTTR--------LYKNVGT--LKRALRTEE-HWLKVENTKHKGSNPGPL 87
T+ I K I N TT ++ N G LK L E + V T P PL
Sbjct: 455 ITYRIKKIIGNGTTGNVDDETFGIFPNSGLIYLKENLDRETINKYDVLITATDNGTP-PL 513
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
TC I V D NDN+P F + Y SI E++P + V +SA D D G NS + ++ +
Sbjct: 514 TATCKILITVTDANDNDPKFQMDNYEFSIEENLPPNSPVGKISAVDLDYGQNSLIKYSFI 573
Query: 148 EPN 150
N
Sbjct: 574 PSN 576
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GPL G C+ I ++D+NDN P F Y+ S+ E GT V VSA+D D G N+ + +
Sbjct: 1537 GPLFGYCDVIIKLQDENDNAPKFTQEYYTASVWEGNNKGTYVMQVSATDLDEGSNAHVLY 1596
Query: 145 NELEPN 150
+ ++ N
Sbjct: 1597 HIVDGN 1602
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL I ++D+NDN P FPV +Y + E+ PVGT V A DAD G+ KL+++
Sbjct: 2069 PLSNLATVKIKLKDENDNVPKFPVLEYFEFVAENEPVGTSVFTARAVDADKGIFGKLNYS 2128
Query: 146 EL 147
L
Sbjct: 2129 IL 2130
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 35 YAPAFTFSIAKFIANPTTRLYKNVGT----------LKRALRTEEHWLKVENTKHKGSNP 84
+ P FT S F ++ VGT L R + ++ L+V +N
Sbjct: 742 HRPTFTSSSLVFKVKENVKIGYVVGTVAPTDSFNSELDRE-KQSDYLLEVRALDTSATN- 799
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P I + D NDN+P++P + ++ +PED PV TV+ SA DAD NS L +
Sbjct: 800 NPQSSAVTIRIEIVDVNDNSPVWPENPITIELPEDTPVSTVISNYSAFDADTSSNSDLRY 859
Query: 145 NEL 147
+ L
Sbjct: 860 SLL 862
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ N T+I+E D NDN PIF S+Y +++ E +P+ + + V+A+D D G N+++++
Sbjct: 401 SSNMTLIIEVQDVNDNAPIFERSEYYVNVIESLPINSQILQVAATDQDTGNNARITY 457
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
L E H + N + P G I +ED NDN P F + +S+PED+ GT
Sbjct: 267 LDHEIHSSILLNVQALSGESNPTYGHTQVNIEIEDVNDNAPEFGSNNVRISVPEDIEPGT 326
Query: 125 VVQVVSASDADLGVNSKLSWNEL 147
+ A D D G N + ++ L
Sbjct: 327 PLYQAHAIDKDSGENGVVRYSLL 349
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A I P + L K L R +R + + L + T NP L GT + + D NDN
Sbjct: 1606 AFVIEPPFSGLVKTNIVLDREIR-DVYKLTIIATDE--GNP-QLTGTATLRVNIVDANDN 1661
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P FP +S+ E VGTV+ V+A+D D
Sbjct: 1662 QPTFP-PHGVISVSEGTEVGTVLTSVTANDVD 1692
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 95 IIVEDQNDNNPIF----PVSQYSLSIPEDVPVGTVVQVVSASDADL--GVNSKLSWNELE 148
+ ++D NDN PIF Y +++ E P+GT V + A+D DL G N++L+++ +
Sbjct: 1963 VTIDDANDNAPIFQGLNSDGIYEVTLSESSPIGTSVITLFANDTDLPGGPNTELTYDIIS 2022
Query: 149 PN 150
N
Sbjct: 2023 GN 2024
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R ++++ H + + +GS P GTCN T+ V DQNDN+P F S+YS ++PED
Sbjct: 1132 LDREMQSQFHLTVL--ARDRGSPP--RSGTCNMTVHVLDQNDNDPQFEHSEYSATVPEDA 1187
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
PV T V VV A+D D G N ++++
Sbjct: 1188 PVNTTVLVVKATDHDEGSNGHVTYS 1212
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + I ++D+NDN+P FP++ Y+ + E P+GT V A DAD G+ KL++
Sbjct: 1994 PLSSLVSVFIRIKDENDNSPHFPLAMYTEFVEESSPIGTTVFTARAMDADRGLYGKLNYT 2053
Query: 146 ELEPNG 151
E G
Sbjct: 2054 MAEGEG 2059
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T++R L E H + N + +P P G + + D NDN P F +SIPE+
Sbjct: 184 TVQRPLDHELHPFLLLNVQATSGHP-PSYGHTQVNVTIWDVNDNAPSFESPSLKISIPEN 242
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLF 153
V V T V A DAD G N + + E P+G F
Sbjct: 243 VEVDTPTYVAHARDADGGRNGAVRYALAENPDGAF 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ H L VE + +P L T + V D NDN+P+F + +PED G V
Sbjct: 406 DHHTLAVEVVDN--GSPA-LSSTATVQVRVLDANDNDPMFEKPVFEFFVPEDAEKGRRVG 462
Query: 128 VVSASDADLGVNSKLSWNELEPNGLF 153
VSA D D G N+ L ++ + NG F
Sbjct: 463 TVSAHDKDAGSNAALRYSLVNANGSF 488
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 41 FSIAKFIANPTTRLYKNVG--TLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTI 95
+SI + +P +L G TL+ L E E+ L V+ T + L +
Sbjct: 793 YSIVEQSPSPAFQLDSGTGALTLQSQLDYEVQPEYTLVVKATDQAKDSEKRLFTLVTCKV 852
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLF 153
IVED+NDN PIF S+ + + ED PVG V + A+D D N ++S+ N G F
Sbjct: 853 IVEDENDNIPIFK-SKGQVDVMEDEPVGFTVLHIIATDNDSRDNKRVSYVINSGNEKGHF 911
Query: 154 SSDL 157
+ D+
Sbjct: 912 ALDI 915
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+ + + V D NDN P F S S + E VPVG+ V VV+A D D G N +++
Sbjct: 629 PMEARLSLKVHVLDLNDNQPTFFTSSLSFQVREGVPVGSQVGVVNAVDQDAGENGHITY 687
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L GTC I V D NDN P+FP +SI E VG+V+ ++A+D D
Sbjct: 1576 LTGTCTLRIAVVDINDNQPVFPPDSV-VSISEGAEVGSVLTTITANDVD 1623
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P PL + V+D NDN P F QY +++ E + + VSA+D D
Sbjct: 305 TATDGGSP-PLSSNMTLLVEVQDVNDNAPTFERPQYKVNVLESLSANSQFLQVSATDKDT 363
Query: 137 GVNSKLSWNELEPNG 151
G N++L++ LE G
Sbjct: 364 GNNARLTFKLLEGPG 378
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L+V T GS P N + VED ND P F S+ E P G+VV
Sbjct: 720 EYTLQV--TAADGSALNPRSSIINVRVKVEDVNDCAPTFEDDPVMFSVSESAPEGSVVWT 777
Query: 129 VSASDADLGVNSKLSWN--ELEPNGLFSSD 156
+A D D G N ++ ++ E P+ F D
Sbjct: 778 FTAKDLDSGANGEVQYSIVEQSPSPAFQLD 807
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ V+D ND+ P F +Y ++ E PVGT V V A+D DLG ++ LS++
Sbjct: 956 VYVQDVNDSPPRFLRERYLSNVSESAPVGTSVLTVHATDKDLGASTNLSYS 1006
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T + V +++ P+F Y ++P D P G +V V A+D D G +
Sbjct: 2092 ATDAGGKYATVQVQVDVASKDEYPPVFRQKMYRFAVPGDAPAGHIVGRVQATDVDQGPDG 2151
Query: 141 KLSW 144
K+ +
Sbjct: 2152 KIVY 2155
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
+ V D NDN P+F +Y++S+ E V T V VV ASD D GV + + + N GL
Sbjct: 6 VYVVDVNDNRPVFYPREYNVSLREYDTVSTPVVVVVASDMDSGVFGHVKYRIVSGNARGL 65
Query: 153 FSSDLRVEWV 162
F + LR +WV
Sbjct: 66 FRA-LRRQWV 74
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
I + D N+N P F S Y SI ED P GT V VSA+D D+
Sbjct: 1791 IQIADVNNNAPRFLESAYRASIREDTPPGTTVIRVSATDLDI 1832
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
++V D NDN P+F +L + E+ PVGT + V A DAD G N+ + + E+ +G
Sbjct: 533 VVVADVNDNAPVFVEPAETLVGVREEQPVGTELAQVQAVDADEGKNADVFY-EIRADG 589
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
L+V +T H LV T+ V D NDN+P F Y +PE +G+ + V+A
Sbjct: 1671 LRVSDTAHMAET---LV-----TVHVTDVNDNSPRFTQPSYHAILPESAGLGSSIITVNA 1722
Query: 132 SDADLGVNSKLSWNEL 147
+D D G N+++ W L
Sbjct: 1723 TDLDSGNNAQI-WYSL 1737
>gi|27370290|ref|NP_766441.1| cadherin-7 precursor [Mus musculus]
gi|81913388|sp|Q8BM92.1|CADH7_MOUSE RecName: Full=Cadherin-7; Flags: Precursor
gi|26329695|dbj|BAC28586.1| unnamed protein product [Mus musculus]
Length = 785
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|74210196|dbj|BAE23328.1| unnamed protein product [Mus musculus]
Length = 785
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|149037262|gb|EDL91762.1| cadherin 7, type 2 [Rattus norvegicus]
Length = 785
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|26335245|dbj|BAC31323.1| unnamed protein product [Mus musculus]
Length = 340
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL ++ +L V K G L GT + T+ + D ND
Sbjct: 198 GQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVND 257
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP Y ++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|354481305|ref|XP_003502842.1| PREDICTED: cadherin-7 [Cricetulus griseus]
Length = 785
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCN 92
I K A+ T+ + + T+++ L E + L++E ++ ++P GP T
Sbjct: 307 LGIFKISADKDTQ--EGIITIQKELDFEAKTSYTLRIE-AANRDADPRFLSLGPFSDTTT 363
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
IIVED D P+F Y + + E VG ++ V+A D D
Sbjct: 364 VKIIVEDV-DEPPVFSSPLYPMEVSEATQVGNIIGTVAAHDPD 405
>gi|344239133|gb|EGV95236.1| Cadherin-7 [Cricetulus griseus]
Length = 719
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 143 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 202
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 203 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 241
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 37 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 96
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 97 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 137
>gi|395504788|ref|XP_003756729.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 829
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL EE H+ + T G NP GT + V D NDN P+FP S+YS+S+P
Sbjct: 197 LERALDREEEPVHYFTL--TAMDGGNP-VRSGTARIRVAVLDINDNPPVFPQSEYSVSVP 253
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VP GT++ V+A+D D GVN +++++
Sbjct: 254 ENVPKGTLLLTVNATDPDEGVNGEVTYS 281
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G + G L+ + V D NDN P V+ + S+PE P GTV+ +++ D D G N
Sbjct: 321 QGRDGGGLLNRAKVQVTVLDVNDNTPEIIVASLTSSVPEHSPPGTVIALLNVHDRDSGDN 380
Query: 140 SKL 142
++
Sbjct: 381 GRV 383
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + + ++ V D NDN P F + YS I E+ P + V+ASD D G N+ ++++
Sbjct: 433 LSTSAHISLHVADNNDNPPSFRQTSYSAYIRENNPRSASIYSVTASDPDSGENAHITYS- 491
Query: 147 LEPNGLFSSDLRVEWVIN 164
+E + ++ + L IN
Sbjct: 492 IEEDTIYGTPLSSYISIN 509
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D ND+ P F V + + I E+ VGT + +A D DL +NS ++ +L N FS
Sbjct: 122 IEVMDINDHAPRFRVDEVEIKISENAAVGTSFPLPNARDPDLEINSLQNY-QLSSNSHFS 180
Query: 155 SDLRV--------EWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 181 LHVQSRTDGAKYPELVLERALDRE 204
>gi|156365975|ref|XP_001626917.1| predicted protein [Nematostella vectensis]
gi|156213810|gb|EDO34817.1| predicted protein [Nematostella vectensis]
Length = 943
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 26 LHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK-VENTKHKGSNP 84
LH SG + +FT + T G L R +R E L V + + S
Sbjct: 686 LHYMIDSGNFGNSFTL-------DALTGSLSTTGPLDREVRAEYTLLVFVSDLQGNASLG 738
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + + +ED NDN+P+FP SQYSL+IPED GT + V A D D G++ L +
Sbjct: 739 IPLRDSAVVNVFIEDMNDNSPVFPQSQYSLTIPEDTAPGTGIIQVQARDIDSGISQNLHY 798
Query: 145 NELEPNGL 152
+ + N L
Sbjct: 799 SIVSGNSL 806
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T TI + D ND+ P F + YS+ IPE++ +GTVV S D DLG N ++S+
Sbjct: 836 TLEVTITISDVNDSPPEFSQAMYSVRIPENITLGTVVLQPSCVDRDLGTNGQISY 890
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I + D NDN P F YS ++PE+ P G V V+A DAD G N+K +++ G F
Sbjct: 316 ITITDINDNAPKFVNLPYSGTVPENSPTGLTVLRVTAQDADSGDNAKFTYSLTGAAGKFV 375
Query: 155 SDLRVEWVINRSVDQHT 171
V++ ++D+ T
Sbjct: 376 VSSEGYVVVSGNIDRET 392
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ED NDN P+F + YS+S+ E+ +GT V A+DAD G N+ + ++
Sbjct: 124 IEDVNDNTPVFINTPYSISVKENT-LGTTGFAVKATDADQGQNALIKYS 171
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+KFI + T + K +L R + L + +P L + V D ND+
Sbjct: 593 SKFIIDSKTGVIKTSFSLDRET---QDQLNIRVIARDTGSP-QLSAEVGIIVNVTDINDH 648
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F QYS+++ E V+ ++A+D+D G+NS L +
Sbjct: 649 RPAFSQRQYSVTVQEK-RASHVILTLTATDSDRGINSALHY 688
>gi|242009405|ref|XP_002425477.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509319|gb|EEB12739.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 151
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T NP L G+CN TI+V+D+NDN+P F +Y+ SIPED+ + V V A DAD
Sbjct: 61 TAQDRGNPTSLQGSCNITIVVDDENDNDPQFSQQKYTASIPEDILPNSDVLTVHAVDADT 120
Query: 137 GVNSKLSW 144
G+NSK+ +
Sbjct: 121 GINSKIFY 128
>gi|291387490|ref|XP_002710173.1| PREDICTED: protocadherin beta 9 [Oryctolagus cuniculus]
Length = 802
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L + T G +P P GT + I+V D NDN P FP Y PED
Sbjct: 196 LDKALDWEEQQELSLTLTALDGGSP-PRSGTTSIRIVVLDVNDNPPRFPYELYETQAPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+++ VSA DAD GVN ++S++ + S D+R + IN
Sbjct: 255 SPIGSLITKVSAGDADSGVNGEVSYSFFD----VSEDIRTTFQIN 295
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ + V D NDN P F + Y+L + E+ G ++ VSASD D G N++++++ L
Sbjct: 436 HVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDAGANAQVTYSLL 491
>gi|444730891|gb|ELW71262.1| Cadherin-19, partial [Tupaia chinensis]
Length = 777
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ V+ G PG L GT + + + D NDN P
Sbjct: 202 FSIEPTTGVIRISSQMDRELQ-DEYWVIVQAKDMIG-QPGALSGTTSVLVKLSDLNDNKP 259
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++PE P GT + + A D D+G N+++ ++
Sbjct: 260 IFKESLYRLTVPESAPTGTSIGKIMAHDNDIGQNAEMDYS 299
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT V V+ASDAD G N++L ++ L+
Sbjct: 141 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTFVIQVTASDADDPSSGNNARLLYSLLQGQP 200
Query: 152 LFS 154
FS
Sbjct: 201 YFS 203
>gi|431906995|gb|ELK11114.1| Cadherin-7 [Pteropus alecto]
Length = 832
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 256 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 315
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + ASDAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 316 YNVPESLPVASVVARIKASDADIGANAEMEYKIVDGDGL--------GVFKISVDKDTQE 367
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 150 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPRFLDGPYTAGV 209
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 210 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 250
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 384 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 441
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 442 IIGTVAAHDPD 452
>gi|380014510|ref|XP_003691272.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-like wing polarity
protein stan-like [Apis florea]
Length = 3167
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
+ ++FI NP T L R L + L V T G P PL T + I V D N
Sbjct: 851 AASEFIINPQTGAITTTRPLDREL-VPAYLLTV--TARDGGVP-PLSDTTDVEISVTDVN 906
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV VGT V VSA+DAD +N ++ + E + +G F+ D
Sbjct: 907 DNAPVFEAPQYQGSIPEDVLVGTSVLRVSATDADTDLNGRVRYGLEDDGDGAFAVD 962
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + + D N+ +P+F + YS+S+ ED P+GT V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNISDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNA 837
Query: 141 KLSWN 145
+++++
Sbjct: 838 QVTYS 842
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK 73
+S+S LL++R S A + +P T L R + H+ +
Sbjct: 294 RYSMSSLLDAR-----------------SQALLVLDPVTGRVTTRARLDRE-SVDVHYFR 335
Query: 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
V S P P GT + V D ND+ P F + SI E VPVG+ V V A+D
Sbjct: 336 VLAVDD--SFP-PRTGTTTLQVNVLDTNDHAPSFEWPEEEASIREGVPVGSTVVTVKATD 392
Query: 134 ADLGVNSKLSW 144
D G N+++ +
Sbjct: 393 QDAGRNAEVEY 403
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P F S + S+ E+VPVG + + A DAD G N+++ +
Sbjct: 580 VGDVNDNAPRFYTSHFQESVSENVPVGYSILRIQAYDADEGANAQIKY 627
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSW 144
T N T++V D NDN P F YS IPED+ V+ + A+DAD G N+ + +
Sbjct: 464 TANATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TI +ED ND+ P F + L I E+ PVG+ V + A D D G N+ + ++
Sbjct: 1003 TIKIEDVNDSPPXFENDKIILYIAENSPVGSTVGEIYAHDPDEGPNAVVQYS 1054
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 81 GSNPGPLVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++ G + + + T+I V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 673 AADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSEDDPPGTPVTSVTATDPD 729
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S ++F NP T TL R L ++L V T G P PL T N I V D N
Sbjct: 850 SASEFTINPQTGAITTTRTLDREL-VPGYFLTV--TARDGGVP-PLSDTINVEISVTDVN 905
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV GT V VSA+DAD +N ++ + E + +G F+ D
Sbjct: 906 DNAPVFESPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALEDDGDGAFAID 961
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + V D N+ P+F + Y++S+ ED P+GT V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVLVVSATDSDVGKNA 837
Query: 141 KLSWNELEPNGLFSSDLRV 159
+++++ G +S+ +
Sbjct: 838 QITYSLGTDGGESASEFTI 856
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK 73
+S+S LL++R S A + +P T L R + H+ +
Sbjct: 294 RYSMSSLLDAR-----------------SQALLVLDPVTGRVTTRARLDRE-SVDVHYFR 335
Query: 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
V S P P GT + V D ND+ P F + SI E VPVG+ V V A+D
Sbjct: 336 VLAVDD--SFP-PRTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGVPVGSTVVTVKATD 392
Query: 134 ADLGVNSKLSWNEL 147
D G N+++ ++ L
Sbjct: 393 QDTGRNAEVEYSIL 406
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P F S + S+ E+VP+G + + A DAD G N+++ +
Sbjct: 580 VGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDADEGANAQIKY 627
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + + V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 680 PKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVTATDPD 729
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSW 144
N T++V D NDN P F YS IPED+ V+ + A+DAD G N+ + +
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TI ++D ND+ P F + L I E+ P+G+ V + A D D G N+ + ++
Sbjct: 1002 TIKIQDVNDSPPAFENDKIVLYIAENSPIGSTVGEIYAHDPDEGPNAVVQYS 1053
>gi|390459357|ref|XP_003732285.1| PREDICTED: protocadherin beta-16 [Callithrix jacchus]
Length = 797
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EEH L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEHQLRLTLTALDGGSP-PRSGTTQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L +
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEL 294
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S D D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSIKDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDINDNVPAFTQSSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
>gi|119583578|gb|EAW63174.1| cadherin 7, type 2, isoform CRA_b [Homo sapiens]
Length = 630
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|23331158|gb|AAH36786.1| CDH7 protein [Homo sapiens]
Length = 630
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNEPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|397514081|ref|XP_003827329.1| PREDICTED: cadherin-7 isoform 2 [Pan paniscus]
Length = 869
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 293 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 352
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 353 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 404
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 187 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 246
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 247 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 287
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 408 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 465
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 466 YPMEVSEATQVGNIIGTVAAHDPD 489
>gi|302565706|ref|NP_001180923.1| cadherin-7 precursor [Macaca mulatta]
gi|109122430|ref|XP_001094033.1| PREDICTED: cadherin-7-like isoform 2 [Macaca mulatta]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYRIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|6483290|dbj|BAA87415.1| cadherin-7 [Homo sapiens]
gi|119583577|gb|EAW63173.1| cadherin 7, type 2, isoform CRA_a [Homo sapiens]
gi|119583579|gb|EAW63175.1| cadherin 7, type 2, isoform CRA_a [Homo sapiens]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|403267948|ref|XP_003926055.1| PREDICTED: cadherin-7 [Saimiri boliviensis boliviensis]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|332230382|ref|XP_003264370.1| PREDICTED: cadherin-7 isoform 1 [Nomascus leucogenys]
gi|332230384|ref|XP_003264371.1| PREDICTED: cadherin-7 isoform 2 [Nomascus leucogenys]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|355755091|gb|EHH58958.1| Cadherin-7 [Macaca fascicularis]
gi|380787901|gb|AFE65826.1| cadherin-7 preproprotein [Macaca mulatta]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYRIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|296222837|ref|XP_002757361.1| PREDICTED: cadherin-7 isoform 1 [Callithrix jacchus]
gi|296222839|ref|XP_002757362.1| PREDICTED: cadherin-7 isoform 2 [Callithrix jacchus]
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E +G ++ V+A D D
Sbjct: 382 YPMEVSEATQIGNIIGTVAAHDPD 405
>gi|16306487|ref|NP_387450.1| cadherin-7 preproprotein [Homo sapiens]
gi|16306489|ref|NP_004352.2| cadherin-7 preproprotein [Homo sapiens]
gi|114673478|ref|XP_001149085.1| PREDICTED: cadherin-7 isoform 1 [Pan troglodytes]
gi|114673480|ref|XP_001149161.1| PREDICTED: cadherin-7 isoform 2 [Pan troglodytes]
gi|397514079|ref|XP_003827328.1| PREDICTED: cadherin-7 isoform 1 [Pan paniscus]
gi|296434420|sp|Q9ULB5.2|CADH7_HUMAN RecName: Full=Cadherin-7; Flags: Precursor
Length = 785
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S ++F NP T TL R L ++L V T G P PL T N I V D N
Sbjct: 850 SASEFTINPQTGAITTTRTLDREL-VPGYFLTV--TARDGGVP-PLSDTINVEISVTDVN 905
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV GT V VSA+DAD +N ++ + + + +G F+ D
Sbjct: 906 DNAPVFEAPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALDDDGDGAFAID 961
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + V D N+ P+F + Y++S+ ED P+GT V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVLVVSATDSDVGKNA 837
Query: 141 KLSWNELEPNGLFSSDLRV 159
+++++ G +S+ +
Sbjct: 838 QITYSLGTDGGESASEFTI 856
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK 73
+S+S LL++R S A + +P T L R + H+ +
Sbjct: 294 RYSMSSLLDAR-----------------SQALLVLDPVTGRVTTRARLDRE-SVDVHYFR 335
Query: 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
V S P P GT + V D ND+ P F + SI E VPVG+ V V A+D
Sbjct: 336 VLAVDD--SFP-PRTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGVPVGSTVVTVKATD 392
Query: 134 ADLGVNSKLSWNEL 147
D G N+++ ++ L
Sbjct: 393 QDAGRNAEVEYSIL 406
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P F S + S+ E+VP+G + + A DAD G N+++ +
Sbjct: 580 VGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDADEGANAQIKY 627
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + + V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 680 PKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVTATDPD 729
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSW 144
N T++V D NDN P F YS IPED+ V+ + A+DAD G N+ + +
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TI ++D ND+ P F + L I E+ P+G+ V + A D D G N+ + ++
Sbjct: 1002 TIKIQDVNDSPPAFENDKIVLYIAENSPIGSTVGEIYAHDPDEGPNAVVQYS 1053
>gi|10803408|emb|CAC13127.1| cadherin-7 [Homo sapiens]
Length = 784
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|426386187|ref|XP_004059573.1| PREDICTED: cadherin-7 isoform 1 [Gorilla gorilla gorilla]
gi|426386189|ref|XP_004059574.1| PREDICTED: cadherin-7 isoform 2 [Gorilla gorilla gorilla]
Length = 785
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|327284139|ref|XP_003226796.1| PREDICTED: cadherin-6-like isoform 2 [Anolis carolinensis]
Length = 794
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D NDN P FP S Y
Sbjct: 215 GIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSAYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+PE P+ + V + ASDAD+G N+++ ++ +E +GL
Sbjct: 275 FKVPESAPLDSAVGRIKASDADVGQNAEMEYSIIEGDGL 313
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 56 KNVGTLK--RALRTEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+N G ++ R L EE + + + G P+ I + D NDN P+F Y
Sbjct: 105 ENTGDIQATRRLDREEKPVYILRAQAINKRTGRPVEPESEFVIKIHDINDNEPLFTKDIY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
+ S+PE VGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 165 NASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQPYFS 209
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 56 KNVGTLKRALRTE---EHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDN 103
+ + T+K+AL E + LKVE SNP GP T I VED D
Sbjct: 326 EGIVTVKKALDFEKKRQFTLKVE-----ASNPHVDPRFLYLGPFKDTTTVRIQVEDV-DE 379
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P+F Y L + EDV + V+ V+A D D N
Sbjct: 380 PPVFSRPAYILEVKEDVQINAVIGTVTARDPDSAKN 415
>gi|432913578|ref|XP_004078978.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 812
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 33 GMYAPAFTFSIAK----FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPL 87
G+ A F +SI++ F +PTT + + +G T+EH+ V K G L
Sbjct: 197 GIGAKLF-YSISRGHPYFSVDPTTGVIRTALGPKDMDRETKEHYQVVIEAKDMAGQRGGL 255
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT I + D NDN P+F S Y LS+PE GTVV V A+D D+G N+++S++
Sbjct: 256 TGTTVVNISLTDVNDNPPVFTQSVYQLSVPESAMFGTVVGSVQATDRDIGRNAEMSFS 313
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
+R R E+ + K++ T L I ++D NDN P F Y+ SIPE
Sbjct: 119 RRLDREEKAFYKLKATVVNKQTGLQLEPETEFIIKLQDMNDNEPQFSQEVYTASIPERSD 178
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
VGT V V+A+DAD G+ +KL ++ + FS D
Sbjct: 179 VGTPVIQVTATDADDSMYGIGAKLFYSISRGHPYFSVD 216
>gi|402903308|ref|XP_003914513.1| PREDICTED: cadherin-7 [Papio anubis]
Length = 809
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYRIVDGDGL--------GIFKISVDKETQE 320
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|33112062|gb|AAP94032.1| cadherin 7 precursor [Mus musculus]
gi|148707892|gb|EDL39839.1| cadherin 7, type 2 [Mus musculus]
gi|187954405|gb|AAI41120.1| Cadherin 7, type 2 [Mus musculus]
Length = 785
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+GVN+++ + ++ +G+
Sbjct: 269 YNVPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGV 307
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|395830699|ref|XP_003788456.1| PREDICTED: cadherin-7 [Otolemur garnettii]
Length = 869
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 293 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 352
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL + SVD+ T +
Sbjct: 353 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL--------GIFKISVDKDTQE 404
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 187 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 246
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 247 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 287
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 408 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 465
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 466 YPMEVSEATQVGNIIGTVAAHDPD 489
>gi|327284137|ref|XP_003226795.1| PREDICTED: cadherin-6-like isoform 1 [Anolis carolinensis]
Length = 790
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D NDN P FP S Y
Sbjct: 215 GIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSAYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+PE P+ + V + ASDAD+G N+++ ++ +E +GL
Sbjct: 275 FKVPESAPLDSAVGRIKASDADVGQNAEMEYSIIEGDGL 313
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 56 KNVGTLK--RALRTEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+N G ++ R L EE + + + G P+ I + D NDN P+F Y
Sbjct: 105 ENTGDIQATRRLDREEKPVYILRAQAINKRTGRPVEPESEFVIKIHDINDNEPLFTKDIY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
+ S+PE VGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 165 NASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQPYFS 209
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 56 KNVGTLKRALRTE---EHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDN 103
+ + T+K+AL E + LKVE SNP GP T I VED D
Sbjct: 326 EGIVTVKKALDFEKKRQFTLKVE-----ASNPHVDPRFLYLGPFKDTTTVRIQVEDV-DE 379
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P+F Y L + EDV + V+ V+A D D N
Sbjct: 380 PPVFSRPAYILEVKEDVQINAVIGTVTARDPDSAKN 415
>gi|300798360|ref|NP_001179833.1| cadherin-7 precursor [Bos taurus]
gi|296473880|tpg|DAA15995.1| TPA: cadherin 7, type 2 [Bos taurus]
Length = 785
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T IIVED D P+F Y + + E VG ++ V+A D D
Sbjct: 356 GPFSDTTTVKIIVEDV-DEPPVFSAPLYPMEVSEATQVGNIIGTVAAHDPD 405
>gi|444730893|gb|ELW71264.1| Cadherin-7 [Tupaia chinensis]
Length = 785
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|348503600|ref|XP_003439352.1| PREDICTED: cadherin-20-like [Oreochromis niloticus]
Length = 797
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T E++ V K G G L GT I + D NDN P+F Y +SIPE PVG+V
Sbjct: 224 ETRENYTVVIQAKDMGGQLGGLAGTTTINITLSDINDNPPMFDQRLYQMSIPESAPVGSV 283
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V + A D D+GVN+++ ++ ++ +G + D+ +
Sbjct: 284 VGRIWAKDRDIGVNAEMKYSIIDGDGRDTFDISTD 318
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + ++D NDN P F Y ++PE +GT V ++A+DAD G ++++
Sbjct: 135 PLEPESEFIVKIQDINDNEPRFLDGPYQATVPEMSKIGTSVIQLTATDADDPTYGNSARV 194
Query: 143 SWNELEPNGLFSSDLR 158
++ LE FS D +
Sbjct: 195 VYSILEGQPYFSVDAK 210
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 47 IANPTTRLYKNVGTLKRALRTE---EHWLKVENT--------KHKGSNPGPLVGTCNTTI 95
I+ T L+ + T+K+ L E + LKVE +H+G P +
Sbjct: 315 ISTDPTNLF-GIITVKKPLNFENKPSYTLKVEGANTHLDPAFRHRG----PFKDVTIVHV 369
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ED D P F + Y + +PED +GT+V+ VSA D D N+
Sbjct: 370 SIEDV-DEPPQFDLPAYYVELPEDAEIGTMVKTVSARDPDAANNT 413
>gi|426253547|ref|XP_004020454.1| PREDICTED: cadherin-7 [Ovis aries]
Length = 785
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPRFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 337 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSAPLYPMEVSEATQVGN 394
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 395 IIGTVAAHDPD 405
>gi|410989769|ref|XP_004001131.1| PREDICTED: protocadherin beta-8 [Felis catus]
Length = 798
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R +E L++ T G +P P G I V D NDN P F S Y + IPED
Sbjct: 196 LDKALDREQEPELRLTLTAQDGGSP-PRSGIAQINIEVVDINDNAPEFEQSLYRVKIPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+DAD+GVN ++S++
Sbjct: 255 SPIGFLIVTVSATDADIGVNGEISYS 280
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVKVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGANAQVTYSLLPP 493
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E N + + S G G C V D NDN P +S ++ IPE+
Sbjct: 303 LKKQLDFERIQFYEVNIEARDS--GSFSGKCTVLTQVLDVNDNAPEITMSAFTRHIPENS 360
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P +V V+S SD D N K++
Sbjct: 361 P-EAMVAVLSVSDLDSEENGKINC 383
>gi|149721177|ref|XP_001492677.1| PREDICTED: cadherin-7 [Equus caballus]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 337 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 394
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 395 IIGTVAAHDPD 405
>gi|351705925|gb|EHB08844.1| Cadherin-7 [Heterocephalus glaber]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GIIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYMAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|345784312|ref|XP_541069.3| PREDICTED: cadherin-7 [Canis lupus familiaris]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 337 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 394
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 395 IIGTVAAHDPD 405
>gi|432112888|gb|ELK35478.1| Cadherin-7 [Myotis davidii]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ I
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGI 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 337 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 394
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 395 IIGTVAAHDPD 405
>gi|301779007|ref|XP_002924921.1| PREDICTED: cadherin-7-like [Ailuropoda melanoleuca]
gi|281344096|gb|EFB19680.1| hypothetical protein PANDA_014331 [Ailuropoda melanoleuca]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGTNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|344268922|ref|XP_003406305.1| PREDICTED: cadherin-7 [Loxodonta africana]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFETKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSAPL 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|291394465|ref|XP_002713681.1| PREDICTED: cadherin 7, type 2 [Oryctolagus cuniculus]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
T+++ L E + L++E +K ++P GP T IIVED D P+F
Sbjct: 324 TIQKELDFEAKTSYTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPF 381
Query: 112 YSLSIPEDVPVGTVVQVVSASDAD 135
Y + + E VG ++ V+A D D
Sbjct: 382 YPMEVSEATQVGNIIGTVAAHDPD 405
>gi|48976105|ref|NP_001001754.1| cHz-cadherin precursor [Gallus gallus]
gi|34761804|gb|AAQ82055.1| cHz-cadherin [Gallus gallus]
Length = 2819
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+EH L V T P PL+G C T+++ D NDN+P F S+Y + ED P+GT
Sbjct: 795 KEHTLSVTATDQA---PEPLIGICQITVLIADVNDNDPKFENSRYQYFLSEDTPIGTSFL 851
Query: 128 VVSASDADLGVNSKLSWNEL 147
V+A D+D GVN+ ++++ L
Sbjct: 852 RVTAHDSDQGVNAAITYSML 871
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW---NEL 147
+ I VED ND+ P+F Y + S+ EDVPVGT V VSA D D G+N + S+ N+
Sbjct: 1574 HCVIYVEDANDHAPVFYPQFYEVASLAEDVPVGTKVVQVSAVDLDSGLNGRFSFHLLNKS 1633
Query: 148 EPNGLFS--SDLRVEWVINRSVDQH 170
+P G FS SD WVI V H
Sbjct: 1634 DPGGQFSVASD---GWVIVAGVLDH 1655
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENT-KHKGSNPG----PLVGTCNTTIIVEDQ 100
F P T + + R R + ++V++ + + PG P T I V D
Sbjct: 1093 FTIEPETGIISTHASFDREKRAS-YLIEVQSQDSSESARPGVHGHPNTDTAYVRIFVSDV 1151
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
NDN P FP Y +S+ ED VG+ V +A D D G N+KL +
Sbjct: 1152 NDNAPAFPQPVYEVSVDEDRDVGSPVVTATADDRDEGANAKLRYQ 1196
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQY---SLSIPEDVPVGTVVQVVSASDADLGVNS 140
P PL + V D N+N P+F Y S + E+ P GT V V A DADLGVN
Sbjct: 699 PTPLSSFAEVIVGVNDINNNKPVFRECTYYSDSTWVLENQPPGTYVLQVEAYDADLGVNG 758
Query: 141 KLSWNELEPNGL---FSSDLRVEWV-INRSVDQHTNK 173
++ + + +G FS D + RS D+ K
Sbjct: 759 EVKYGLMHRDGASLGFSIDSDTGVITTTRSFDREEQK 795
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + V D NDN P F S Y +S+PE VGT V V A+D D G++ ++ +
Sbjct: 1022 PLASFTIVYVNVTDVNDNVPFFVSSNYEVSVPEGADVGTSVVQVLATDLDSGLHGQVRY 1080
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 97 VEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D+ND +P F S YS +IPE +P+GT + V A+D D G NS++S+
Sbjct: 503 ITDENDCSPEFQNSIYSRDNIPETIPIGTSLLQVLATDCDSGSNSEISY 551
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
I+V D ND+ P+F Y+ + E+ + T V VVSA D D G N+ ++++ L+
Sbjct: 1469 ILVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSAMDRDEGENAMVTFSILD 1522
>gi|410977822|ref|XP_003995299.1| PREDICTED: cadherin-7 [Felis catus]
Length = 785
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 337 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 394
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 395 IIGTVAAHDPD 405
>gi|194034566|ref|XP_001926047.1| PREDICTED: cadherin-7 [Sus scrofa]
Length = 728
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 152 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 211
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 212 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 250
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 46 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 105
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 106 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 146
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 70 HWLKVENTKHKGSNP-----GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L++E +K ++P GP T IIVED D P+F Y + + E VG
Sbjct: 280 YTLRIE-AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGN 337
Query: 125 VVQVVSASDAD 135
++ V+A D D
Sbjct: 338 IIGTVAAHDPD 348
>gi|395511793|ref|XP_003760136.1| PREDICTED: cadherin-19 [Sarcophilus harrisii]
Length = 771
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R + +++ + V+ T G PG L GT TI + D NDN P
Sbjct: 197 FTVEPTTGILRISSQMDREAK-DQYLVVVQATDMLGL-PGGLSGTTTVTINLSDVNDNRP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF + Y +++ E PVGT + ++ A D+D+G N+K++++
Sbjct: 255 IFQLGLYHMNVSESAPVGTSIGIIMAEDSDIGENAKMNYS 294
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ +K+ R E+ + K+ + P+ I V D NDN P F Y I
Sbjct: 98 DITAIKKLDREEKAYYKLRAQVLNVNTGKPVEPESEFVIKVLDINDNKPQFLDGPYETRI 157
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD-----LRVEWVINRSV- 167
PE P GT V V+A+D D G N++L + L+ F+ + LR+ ++R
Sbjct: 158 PEMSPEGTSVIQVTATDNDDPSYGNNARLIYTLLQGRPYFTVEPTTGILRISSQMDREAK 217
Query: 168 DQH 170
DQ+
Sbjct: 218 DQY 220
>gi|317420153|emb|CBN82189.1| Cadherin-20 [Dicentrarchus labrax]
Length = 797
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T E++ V K G G L GT I + D NDN P+F Y +S+PE PVG+V
Sbjct: 224 ETRENYTVVIQAKDMGGQLGGLAGTTTVNITLSDINDNPPMFDQRLYQMSVPESAPVGSV 283
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V + A D D+GVN+++ ++ ++ +G + D+ +
Sbjct: 284 VGRIWAKDRDIGVNAEMKYSIIDGDGRDTFDISTD 318
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + ++D NDN P F Y S+PE +GT V ++A+DAD G ++++
Sbjct: 135 PLEPESEFIVKIQDINDNEPRFLDGPYQASVPEMSKIGTSVIQLTATDADDPTYGNSARV 194
Query: 143 SWNELEPNGLFSSDLR 158
++ LE FS D +
Sbjct: 195 VYSILEGQPYFSVDAK 210
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GP + VED D P+F Y + +PED +GTV++ VSA D D N+
Sbjct: 359 GPFKDVTIVHVSVEDV-DEPPLFDSPAYYIELPEDAEIGTVLKTVSARDPDAANNT 413
>gi|403255740|ref|XP_003920569.1| PREDICTED: protocadherin gamma-B5 [Saimiri boliviensis boliviensis]
Length = 818
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
P+F+ +I + Y + K R ++ + ++ T G +P PL GT I
Sbjct: 176 PSFSLTIKQ---KQDGSKYPELALEKTLDREQQSYHRLVLTALDGGDP-PLSGTTELRIQ 231
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V D NDN P+F Y +S+PE+VP+GT V VSA+D D GVNS+++++
Sbjct: 232 VTDANDNPPVFNQDVYRVSLPENVPLGTTVLRVSATDQDEGVNSEITYS 280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+ E
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILRISDVNDNAPVFHQASYWVSVAE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSASD DLG+N ++ + ++LEP L S
Sbjct: 460 NNPPGVSIAQVSASDPDLGLNGQVFYSIVASDLEPLALAS 499
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEIAEDADIGLNSLQKYKLSLN 175
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A+F NP T TL R T + L V T G NP PL T + I + D NDN
Sbjct: 887 AEFTINPQTGAIITTRTLDRE-TTSGYLLTV--TARDGGNP-PLSDTTDVEISLTDVNDN 942
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+F + YS S+ ED VGT V VSA+DAD+G+N K+S++
Sbjct: 943 YPVFKQAAYSGSVLEDALVGTSVVQVSATDADVGLNGKISYS 984
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 15 WSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKV 74
+S+S LL+SR GM F +P T L R + + H+ +V
Sbjct: 331 YSMSSLLDSR------TQGM-----------FEIDPKTGTITTKVKLDREM-VDVHYFRV 372
Query: 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDA 134
T S P P GT I V D ND+ P F +++Y SI E V VG+ V + A+D
Sbjct: 373 --TAMDDSFP-PRSGTTMLQINVLDANDHAPTFEMNEYDASIKESVSVGSTVITLKATDQ 429
Query: 135 DLGVNSKLSWNELEPNG 151
D+G N+ + ++ NG
Sbjct: 430 DVGKNADVEYSIQSING 446
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + + D N+ P+F + Y+ S+ ED VGT V VVSA+D D+G+N+
Sbjct: 814 ASDSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNA 873
Query: 141 KLSWNELEPNGLFSSDLRVEWVIN 164
+++++ E D E+ IN
Sbjct: 874 QITYSLGE-----DGDHPAEFTIN 892
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + + I V+D NDN+P+F Y + ED P GT V V+A+DAD
Sbjct: 716 PQSASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVTATDAD 765
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TI ++D ND+ P F + L I E+ P+G+ V + A D D GVN+ + ++
Sbjct: 1039 TIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEIHAKDPDEGVNAIVQYS 1090
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 92 NTT---IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NTT I V+D NDN P F S + SI E+ P G + V A DAD G N+ + +
Sbjct: 608 NTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAYDADEGPNADIKY 663
>gi|195325634|gb|ACF95725.1| cadherin-7 [Mustela putorius furo]
Length = 608
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 161 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 220
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 221 YNVPESLPVASVVARIKAADADIGANAEMEYKIVDGDGL 259
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + + P+ I ++D NDN P F Y+ +
Sbjct: 55 DIHATKRLDREEQAYYTLRAQALDRLSNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 114
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V +A+DAD G ++++ ++ L+ FS
Sbjct: 115 PEMSPVGTSVVQATATDADDPTYGNSARVVYSILQGQPYFS 155
>gi|440902491|gb|ELR53280.1| Cadherin-7, partial [Bos grunniens mutus]
Length = 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 166 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 225
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 226 YNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGL 264
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 60 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 119
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 120 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 160
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A+F NP T TL R T + L V T G NP PL T + I + D NDN
Sbjct: 887 AEFTINPQTGAIITTRTLDRE-TTSGYLLTV--TARDGGNP-PLSDTTDVEISLTDVNDN 942
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+F + YS S+ ED VGT V VSA+DAD+G+N K+S++
Sbjct: 943 YPVFKQAAYSGSVLEDALVGTSVVQVSATDADVGLNGKISYS 984
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 15 WSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKV 74
+S+S LL+SR GM F +P T L R + + H+ +V
Sbjct: 331 YSMSSLLDSR------TQGM-----------FEIDPKTGTITTKVKLDREM-VDVHYFRV 372
Query: 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDA 134
T S P P GT I V D ND+ P F +++Y SI E V VG+ V + A+D
Sbjct: 373 --TAMDDSFP-PRSGTTMLQINVLDANDHAPTFEMNEYDASIKESVSVGSTVITLKATDQ 429
Query: 135 DLGVNSKLSWNELEPNG 151
D+G N+ + ++ NG
Sbjct: 430 DVGKNADVEYSIQSING 446
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + + D N+ P+F + Y+ S+ ED VGT V VVSA+D D+G+N+
Sbjct: 814 ASDSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNA 873
Query: 141 KLSWNELEPNGLFSSDLRVEWVIN 164
+++++ E D E+ IN
Sbjct: 874 QITYSLGE-----DGDHPAEFTIN 892
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + + I V+D NDN+P+F Y + ED P GT V V+A+DAD
Sbjct: 716 PQSASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVTATDAD 765
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TI ++D ND+ P F + L I E+ P+G+ V + A D D GVN+ + ++
Sbjct: 1039 TIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEIHAKDPDEGVNAIVQYS 1090
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 92 NTT---IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NTT I V+D NDN P F S + SI E+ P G + V A DAD G N+ + +
Sbjct: 608 NTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAYDADEGPNADIKY 663
>gi|348561539|ref|XP_003466570.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-19-like [Cavia porcellus]
Length = 772
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A F PTT + + + R L+ EE+W+ ++ G + G L GT + I + D NDN
Sbjct: 195 AYFSVEPTTGIIRISSKMDRELQ-EEYWIIIQAKDMIGQH-GALSGTASVLIKLSDINDN 252
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PIF S Y L++ E P+GT + ++A D D+G N+++ +
Sbjct: 253 KPIFKDSFYRLTVSESAPMGTTIGRITAYDNDIGENAEMEY 293
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDV 120
K+ L EE L + + G V T + +I V D NDN P F Y +PE
Sbjct: 102 KQKLDREERSLYTLRAQVTDTTVGKNVETESEFVIRVLDINDNEPKFLHGPYEAVVPEMS 161
Query: 121 PVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD-----LRVEWVINRSVDQH 170
P GT V V+ASDAD G N++L ++ L+ FS + +R+ ++R + +
Sbjct: 162 PEGTFVIQVTASDADDPATGNNARLLYSLLQGQAYFSVEPTTGIIRISSKMDRELQEE 219
>gi|345793787|ref|XP_849474.2| PREDICTED: protocadherin gamma-B5 [Canis lupus familiaris]
Length = 807
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + KR R ++ + + T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKRLDREQQSYHCLVLTALDGGDP-PLSGTTELQIQVTDANDNPPVFNQDIYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+PE+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLPENVPPGTAVLQVSATDQDEGINSEITYSFYRTGQVFS 289
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + T+ + D NDN P+F + Y + E
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISITLHIADVNDNAPVFQQASYEVHEAE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSASD DLG N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALAS 499
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 72 LKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
L E TK +G + G L C I ++D+NDN+P + I E+ P GT++
Sbjct: 303 LDFEETKEYSIVVEGRDGGGLAAQCTVEINIQDENDNSPEVTFHSLAEMILENGPPGTLI 362
Query: 127 QVVSASDADLGVNSKL 142
++ D D G N ++
Sbjct: 363 ALIKIHDQDSGENGEV 378
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ ++ VED ND+ P F + + L I E GT + +A DAD+G+N
Sbjct: 118 HVSVDVEDINDHTPKFTQTSFDLQISESTVPGTRFILEAAEDADIGLN 165
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
+ ++FI NP T L R + + L V T G P PL T + I V D N
Sbjct: 851 TASEFIINPQTGAITTTKPLDREI-VPAYLLTV--TARDGGIP-PLSDTTDVEISVTDVN 906
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV VGT V VSA+DAD +N ++ + E + +G F+ D
Sbjct: 907 DNAPVFEAPQYQGSIPEDVLVGTSVLRVSATDADTDLNGRVRYALEDDGDGAFAVD 962
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + + D N+ +P+F + YS+S+ ED P+GT V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNISDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNA 837
Query: 141 KLSWNELEPNGLFSSDLRVEWVIN 164
+++++ NG ++ E++IN
Sbjct: 838 QVTYSLDTDNGDQTAS---EFIIN 858
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK 73
+S+S LL++R S A + +P T L R + H+ +
Sbjct: 294 RYSMSSLLDAR-----------------SQALLVLDPVTGRVTTRARLDRE-SVDVHYFR 335
Query: 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
V S P P GT + V D ND+ P F + SI E VPVG+ V V A+D
Sbjct: 336 VLAVDD--SFP-PRTGTTTLQVNVLDTNDHAPSFEWPEEEASIREGVPVGSTVVTVKATD 392
Query: 134 ADLGVNSKLSWNEL 147
D G N+++ ++ L
Sbjct: 393 QDAGRNAEVEYSIL 406
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P F S + S+ E+VPVG + + A DAD G N+++ +
Sbjct: 580 VGDVNDNAPRFYTSHFQESVSENVPVGYSILRIQAYDADEGANAQIKY 627
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSW 144
T N T++V D NDN P F YS IPED+ V+ + A+DAD G N+ + +
Sbjct: 464 TANATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 81 GSNPGPLVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++ G + + + T+I V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 673 AADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSEDDPPGTPVTSVTATDPD 729
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNG 151
TI +ED ND+ P F + L I E+ P+G+ V + A D D G N+ + ++ + E +
Sbjct: 1003 TIKIEDVNDSPPAFENDKIILYIAENSPIGSTVGEIYAHDPDEGPNAVVQYSVIGGEDSN 1062
Query: 152 LFSSDLR 158
F+ ++R
Sbjct: 1063 SFALNIR 1069
>gi|47213034|emb|CAF95303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4362
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 22 ESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKG 81
+ RY+ + P+ + + S A + P R L R E H + T G
Sbjct: 557 DKRYMLVGPRMSIGSTIVPGSHANTLVLPDRRRTNEERLLDREKLREHHLIL---TAVDG 613
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
NP P GT N T+IV D NDN+PIF YS +PE+V GT V V A+D D G N +
Sbjct: 614 GNP-PRSGTLNVTVIVLDSNDNHPIFSQEVYSADVPENVAAGTSVIKVKATDLDEGANGE 672
Query: 142 LSW 144
+ +
Sbjct: 673 IEY 675
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K+ R ++ + + T G NP P GT I V D NDN P+F S Y IPE++
Sbjct: 3343 KQLDREKQDVISLTLTALDGGNP-PKSGTSQIIISVLDINDNAPVFSRSLYKAQIPENIQ 3401
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT V V++A+D D +N+++ ++
Sbjct: 3402 AGTTVIVLNATDEDKELNAEIEFS 3425
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
P+ C I V DQNDN P V+ S +PED GTV+ ++S +D D G+N K+
Sbjct: 725 PMSTDCTVIIKVLDQNDNAPQIEVTSLSNVVPEDSKPGTVISLISITDLDAGLNGKV 781
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++AL E EH L + T G P GT I V D NDN+P+F YS S+
Sbjct: 186 LQKALDREAMKEHKLVL--TAVDGGRPAK-SGTMGIIIQVLDVNDNSPVFTKEVYSASVN 242
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ P GT+V V+A+D D G N + ++
Sbjct: 243 ENSPPGTLVTRVNATDLDEGANGDIIYS 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 80 KGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
K S+ G PL + I + D NDN P V+ +S ++PED GT V ++S SD D G
Sbjct: 1471 KASDKGSAPLETEKSVKITILDLNDNAPEIEVTSFSKAVPEDSKPGTTVALISVSDKDSG 1530
Query: 138 VNSKL 142
VN K+
Sbjct: 1531 VNGKV 1535
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 80 KGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
K S+ G PL + I + D NDN P V+ +S ++PED GT V ++S SD D G
Sbjct: 2225 KASDKGSAPLETEKSVKITILDLNDNAPEIEVTSFSKAVPEDSKPGTTVALISVSDKDSG 2284
Query: 138 VNSKL 142
VN K+
Sbjct: 2285 VNGKV 2289
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L E+ H L + T G NP G+ N TI V D NDN P+F Y +S+
Sbjct: 2764 LKKPLDREQKAQHSLTL--TALDGGNPS-RSGSLNLTIEVLDTNDNRPVFSKDIYLVSLD 2820
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ GT+V ++A+D D G+N ++ ++
Sbjct: 2821 ENAQRGTLVVQLNATDLDEGLNGEIEYS 2848
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDN 103
KF +P T K G + E + + V+ KG+ P + T + II V+D NDN
Sbjct: 282 KFSIDPKTGDIKVTGVIDFE-ENESYEIDVQ-ASDKGTIP---LSTYRSVIIKVKDLNDN 336
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P ++ +S S+PED +GT V ++SASD D
Sbjct: 337 PPEIEITSFSKSVPEDSRIGTTVALISASDLD 368
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 80 KGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+ S+ G L T + ++++ D NDN P ++ S S+PED GTV+ ++S D D G
Sbjct: 2889 QASDKGHLPWTAESRVVIKIKDINDNRPEIEITSLSTSVPEDAKPGTVISLISIRDKDSG 2948
Query: 138 VNSKL 142
+N K+
Sbjct: 2949 LNGKV 2953
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT I V D NDN P+F Y + E+ P+GT V V+A+D D G+N ++ ++
Sbjct: 1374 GTMTIKITVLDVNDNMPVFAKESYVAVLRENSPIGTTVLQVNATDLDDGLNGEVVYS 1430
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT I V D NDN P+F Y + E+ P+GT V V+A+D D G+N ++ ++
Sbjct: 2128 GTMTIKITVLDVNDNMPVFAKESYVAVLRENSPIGTTVLQVNATDLDDGLNGEVVYS 2184
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + V D NDN P F ++ + E+ PVG ++ ++A DAD+ + ++ ++
Sbjct: 3982 PLSSTSTVAVQVSDVNDNAPRFLEQAINIYVKENSPVGATMKTITAVDADVDQSGQVRYS 4041
Query: 146 ELEPN 150
L+ N
Sbjct: 4042 YLQSN 4046
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + V D NDN P F ++ + E+ PVG ++ ++A DAD+ + ++ ++
Sbjct: 3579 PLSSTSTVAVQVSDVNDNAPRFLEQAINIYVKENSPVGATMKTITAVDADVDQSGQVRYS 3638
Query: 146 ELEPN 150
L+ N
Sbjct: 3639 YLQRN 3643
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ V D NDN P+F + + L + E+ G + VSA D DL N+ +++N
Sbjct: 3003 PLSAVKSLTVYVSDVNDNRPVFNQNPFELYLVENNAPGASIFSVSAVDDDLNENALVNYN 3062
Query: 146 ELEPNGLF 153
+ +GL
Sbjct: 3063 IIRGDGLL 3070
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNP--IFPVSQY----SLSIPEDVPVGTVVQVVSASDADLGVN 139
PL + + + D+NDNNP + P S++ S SIP G V + A D D G N
Sbjct: 4092 PLSSNVSVNVFILDENDNNPAILAPYSEHGSVNSESIPYSAEAGYFVAKIRAVDLDSGYN 4151
Query: 140 SKLSWNELEPNG 151
+ LS++ EP G
Sbjct: 4152 ALLSYHLSEPKG 4163
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 46 FIANPTTRLYKNV-GTLKRALRTEEHWLKVENT-KHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT L N+ + +++ EH K + T K + PL ++ V D NDN
Sbjct: 1545 FMLSPT--LQANMYSVVTKSVLDREHESKYDITITAKDAGDQPLSSHRTISVSVSDVNDN 1602
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+P F + Y+ + E+ GT + VSA D D NS +S+N
Sbjct: 1603 SPEFVTNPYTFYVTENNDPGTTLFSVSAQDCDERDNSLISYN 1644
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 46 FIANPTTRLYKNV-GTLKRALRTEEHWLKVENT-KHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT L N+ + +++ EH K + T K + PL ++ V D NDN
Sbjct: 2299 FMLSPT--LQANMYSVVTKSVLDREHESKYDITITAKDAGDQPLSSHRTISVSVSDVNDN 2356
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+P F + Y+ + E+ GT + VSA D D NS +S+N
Sbjct: 2357 SPEFVTNPYTFYVTENNDPGTTLFSVSAQDCDERDNSLISYN 2398
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND+ P FP S+ L I E P GT Q+ +A D D + S+ +L N F D
Sbjct: 2692 IADVNDHAPSFPESEQRLEIAEHTPPGTRFQIHAARDPDAATLTVRSY-KLSHNDCFDID 2750
Query: 157 LR 158
+R
Sbjct: 2751 IR 2752
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P+ C + V D NDN P V+ ++ ED VGT + +VS D D G N
Sbjct: 3877 PMSTDCKVLVEVLDVNDNAPEITVTSLLSTVKEDAEVGTAIALVSVLDKDGGKN 3930
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P+ C + V D NDN P V+ ++ ED VGT + +VS D D G N
Sbjct: 3474 PMSTDCKVLVEVLDVNDNAPEITVTPLLSTVKEDAEVGTAIALVSVLDKDGGKN 3527
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 388 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 447
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 448 EVSDHSLFGLD 458
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 950 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 1009
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 1010 EVSDHSLFGLD 1020
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 1704 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 1763
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 1764 EVSDHSLFGLD 1774
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 2458 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 2517
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 2518 EVSDHSLFGLD 2528
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 3122 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 3181
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 3182 EVSDHSLFGLD 3192
>gi|431899578|gb|ELK07541.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Pteropus alecto]
Length = 964
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G NPGPL T I+VED+NDN P F +Y + +PEDV V T V V A+D D G N
Sbjct: 149 QGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLRVQATDRDQGQN 208
Query: 140 SKLSWNELEPN 150
+ + ++ + N
Sbjct: 209 AAIHYSIVSGN 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTK----HKGSNPGPLVGTCNTTIIVEDQN 101
F PT+ G ++ R + + V N + +GS P PL + + + V D N
Sbjct: 659 FYVEPTS------GVIRTQRRLDRENVAVYNLRALAVDRGS-PAPLSASVDIQVTVLDIN 711
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFS 154
DN P+F + L + E+ PVG+VV + A+D D G N+++ + +E N L S
Sbjct: 712 DNPPVFERDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLS 771
Query: 155 SDLR 158
DLR
Sbjct: 772 GDLR 775
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED P+GT + +SASD D G N+++++ +P
Sbjct: 490 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPLGTSIATISASDEDTGENARITYVLEDP 549
Query: 150 NGLFSSD 156
F D
Sbjct: 550 VPQFRID 556
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ H LKV H +P T T+ V D ND++P+F S+Y + E++ VG V
Sbjct: 34 DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 90
Query: 128 VVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRS 166
+ A+D D N+ + + LE G+F D R V R+
Sbjct: 91 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRA 130
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 86 PLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL+ + ++ V D NDN P+F S + ++ E+VP+G V + A DAD G NS+L +
Sbjct: 260 PLINSSGLVSVQVLDVNDNAPLFVSSPFQAAVLENVPLGHSVLHIQAVDADAGENSRLRY 319
Query: 145 N 145
+
Sbjct: 320 H 320
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+ E + VE H P+ + + +I V D NDN+PIF Y L + ED VG+
Sbjct: 367 QVEHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPIFTQPVYELRLNEDAAVGSS 423
Query: 126 VQVVSASDAD 135
V + A D D
Sbjct: 424 VLTLRAHDRD 433
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L
Sbjct: 593 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPAATSVLQVSATDRDSGPNGRL 645
>gi|395820216|ref|XP_003783470.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Otolemur
garnettii]
Length = 3016
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 440 EYRLLVE-ADDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLR 498
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 499 VQATDRDQGQNAAIHYSIVSGN 520
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I + D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 785 TAQVFINITDANTHRPVFQSSHYTVSVSEDQPVGTSIATISATDEDTGENARVTYVLEDP 844
Query: 150 NGLFSSD 156
F D
Sbjct: 845 VPQFRID 851
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + V D NDN P+F + L + E+ PVG+VV + A D D G N+++
Sbjct: 988 SPAPLSALVEIQVTVLDINDNPPVFERDELELFVEENSPVGSVVARIHADDPDEGPNAQI 1047
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1048 MYQIVEGNVPEVFQLDLLSGDLRA 1071
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 63 RALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
RAL E H LKV H +P T T+ V D ND++P+F S+Y + E+
Sbjct: 327 RALDRETQDTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSPVFEQSEYRERVREN 383
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRSV 167
+ VG V + A+D D N+ + + LE G+F D R V R+V
Sbjct: 384 LEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGIFEIDARSGVVRTRAV 432
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + + V D NDN PIF S + ++ E+VP+G V
Sbjct: 547 EYTLRIK--AQDGGRP-PLINSSGLVAVQVLDVNDNAPIFVSSPFQAAVLENVPLGYSVL 603
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 604 HIQAVDADAGENARLRY 620
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y + + ED VG+ V
Sbjct: 664 ERYSFAVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPMYEVRLNEDAAVGSSVL 720
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 721 TLRAEDRD--ANSVITYQ 736
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 260 SPQFPLPSYQVSVPENQPAGTAVIELRAHDPDAGEAGRLSYQMEALFDERSNGYFLIDSD 319
Query: 159 VEWV-INRSVDQHTN 172
V R++D+ T
Sbjct: 320 TGAVSTARALDRETQ 334
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V +SA+D D G N +L +
Sbjct: 888 TTSLEILILDANDNAPQFLRDFYQGSVFEDAPPSTSVLQISATDRDSGPNGRLLY 942
>gi|344268920|ref|XP_003406304.1| PREDICTED: cadherin-19 [Loxodonta africana]
Length = 771
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ EEH + ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGVIRIFSEMDRELQ-EEHRVIIQAKDMIG-QPGGLTGTTSVLIRLSDINDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF + Y LS+ E P+GT + + A D D+G N+++ ++
Sbjct: 255 IFKKTFYRLSVSESAPIGTSIGTIKAHDNDIGENAEMEYS 294
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
I V D NDN P F Y +PE P GT+V V+A DAD
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTARDAD 176
>gi|224046030|ref|XP_002187087.1| PREDICTED: cadherin-7 [Taeniopygia guttata]
Length = 785
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKVSVDKDTQE 320
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F YS+ + E VGT++ V+A D D
Sbjct: 356 GPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPD 405
>gi|311245212|ref|XP_003121743.1| PREDICTED: cadherin-19-like [Sus scrofa]
Length = 770
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIGL-PGALSGTTSVLITLSDINDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E VP+GT + + A D D+G N+++ ++
Sbjct: 255 IFKDSLYRLTVSESVPIGTSIGKIMAYDNDIGENAEMDYS 294
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|395511789|ref|XP_003760134.1| PREDICTED: cadherin-7 [Sarcophilus harrisii]
Length = 785
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 320
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|61098459|ref|NP_001012755.1| cadherin-7 precursor [Rattus norvegicus]
gi|81909554|sp|Q5DWV2.1|CADH7_RAT RecName: Full=Cadherin-7; Flags: Precursor
gi|60417791|dbj|BAD90595.1| Cadherin7 [Rattus norvegicus]
Length = 785
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+ PE +PV +VV + A+DAD+GVN+++ + ++ +GL
Sbjct: 269 YNGPESLPVASVVARIKAADADIGVNAEMEYKIVDGDGL 307
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G CN ++ VEDQNDN P F +++Y S+ E+ +G+ V + ASDADLGVNS+L ++
Sbjct: 1940 GHCNISVFVEDQNDNEPRFELAKYMASVAENAAIGSSVLRIKASDADLGVNSRLVYS 1996
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL T + + D NDN PIF S Y++S+ E+ PVG + VSASD D GVN+
Sbjct: 574 GGQP-PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNA 632
Query: 141 KLSW 144
+++
Sbjct: 633 MVNY 636
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL G I ++D NDN PIF S+Y ++PE+ VG+ V V ASD D N
Sbjct: 249 GGTP-PLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGSSVLQVYASDTDADENG 307
Query: 141 KLSW----NELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ + + + +F D R V IN+ +D T +
Sbjct: 308 LVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKE 345
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ V D NDN+P F Y+ I E++ G VV VVSA+DADLG N+ + ++ L N F
Sbjct: 1145 VRVLDSNDNDPKFLRESYAFKIEENLRRGAVVGVVSATDADLGENAAIRYSLLPANSSF 1203
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ G I VED NDN P F S +S+PE+ +GT + A D D G + +++++
Sbjct: 898 PVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHAHDKDSGSSGQVTYS 957
Query: 146 -------------ELEPNGLFSSDLRV-EWVINRSVDQHTNK 173
+ + LF+ D R V++R +D T +
Sbjct: 958 LANGNATKSGKQKAAQASSLFAIDARSGHLVLSRHLDYETAQ 999
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R L++E L++ SN P I V D NDN P +P L + E +
Sbjct: 1447 LDRELQSE-FRLEIRALDTSASN-NPQSSAITVKIEVADVNDNAPTWPHDPIELEVSESL 1504
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
VG+++ +A+DAD G N +L + L
Sbjct: 1505 MVGSIIYNFTATDADSGTNGELQYRLL 1531
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHW--LKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
+F + + L VG L R L++ + L + +++ + G+ I V D ND
Sbjct: 2004 QFAIDSKSGLITTVGKLDRELQSSYSFMVLATDCGRYEVRS-----GSVAVQINVLDIND 2058
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N PIF YS +P + G + V A DAD G N ++ + + L S+ +R ++
Sbjct: 2059 NKPIFERYPYSGQVPALIQPGQTLLKVQAHDADQGSNGEVLYALKADSLLGSAAIRSKFR 2118
Query: 163 IN 164
IN
Sbjct: 2119 IN 2120
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + V+D NDN P+F +Y++++ E + + V+ASD D G N+++++
Sbjct: 1014 PLSADLTILVDVQDVNDNPPVFERDEYAVNVSESRSINAQIIQVNASDLDTGNNARITY 1072
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+ H L++ + + P L + +ED+NDN+P F Q+ + E GT V
Sbjct: 2298 TQPHELRLVMVA-RTTEPPFLSSYAELIVELEDENDNSPQFSQRQFVATAWEGNSKGTFV 2356
Query: 127 QVVSASDADLGVNSKLSWNELEPNG--------LFSSDLRVEWVINRSV 167
V A DAD NS++ ++ ++ N FS +R V++R +
Sbjct: 2357 AQVQAFDADENANSRMRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI 2405
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 22 ESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKG 81
E R+ ++P+SG+ A T P G +R +H +
Sbjct: 1659 EGRF-RIKPQSGIIELAKTLP-------PAFEQLDKTGRFTLTIRASDHGV--------- 1701
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
P P T + ++V+ + N P F + Y +I E+VP G+ V V+A N+
Sbjct: 1702 --PNPKQTTLSLQLMVQGSHSNPPRFLQAVYHATILENVPSGSFVLQVAAKAFHGADNAN 1759
Query: 142 LSWNELEPNGLFSSDLRVEW 161
LS+ E+ P G+ V+W
Sbjct: 1760 LSY-EI-PTGVADDHFHVDW 1777
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFS 154
PIF ++Y+ + EDVP GTVV V A+ +D S + ++ +P+G FS
Sbjct: 813 PIFEKARYNYYVKEDVPRGTVVGSVIATSSDTAQRSPVRYSIYSGDPDGYFS 864
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+ GT + + D NDN P FP S +S+ E +G V+ VSA+D D
Sbjct: 2423 MTGTSTIRVHIVDVNDNQPTFPPSNV-VSVSEATELGAVIASVSANDVD 2470
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ D+NDN P FP+ +Y + E+ P G+ + A+D D G +L+++
Sbjct: 2871 LHDENDNAPQFPLGEYVHFLGENEPAGSSIFRAHATDLDRGAFGQLNYS 2919
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G CN ++ VEDQNDN P F +Y S+PE+ +G+ V ++A DADLGVNSKL ++
Sbjct: 1317 GHCNISVFVEDQNDNEPHFDQPKYVASVPENAAIGSSVLRINARDADLGVNSKLVYS 1373
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
V D NDN+P F Y I E++ G VV VVSASDADLG N+ + ++ L N F
Sbjct: 517 VLDANDNDPKFQRESYEFRIEENLRRGAVVGVVSASDADLGENAAIRYSLLPANSSF 573
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R L++E L++ SN P I V D NDN P +P+ L + E +
Sbjct: 817 LDRELQSEFR-LEIRALDTSASN-NPQSSAITVKIEVADVNDNAPRWPLDPIELQVSESL 874
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
PVG ++ +A+DAD G N +L + L
Sbjct: 875 PVGAIIHNFTATDADSGTNGELQYRLL 901
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 63 RALRTEEHWLKVE---NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R R +H K + N + +P P+ G I VED NDN P F S +S+PE+
Sbjct: 241 RIARPLDHEAKAQVLLNIQATSGDP-PVYGHTQVNIEVEDVNDNAPEFETSMVRISVPEN 299
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN-------------ELEPNG--LFSSDLRV-EWVI 163
+GT + A D D G + +++++ + +P G LF+ D R V+
Sbjct: 300 AELGTPLFAAHAHDKDSGSSGQVTYSITGNANATQPGRGKAQPTGAALFAIDARSGHLVL 359
Query: 164 NRSVDQHT 171
+R +D T
Sbjct: 360 SRHLDYET 367
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + + D+NDN P FP+++Y S+ E+ P+G+ V ASD D G +L+
Sbjct: 2240 PRPLCSLQRFQLSLHDENDNAPQFPLAEYVHSLAENEPLGSSVFRAHASDLDRGAFGQLN 2299
Query: 144 WNELEPNGLFSS 155
++ + G SS
Sbjct: 2300 YSLVAAPGDDSS 2311
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + V+D NDN P+F +Y++++ E P+ + V+ASD D G N+++++
Sbjct: 384 PLSADLTILVDVQDVNDNPPVFERDEYAVNVSESRPINAQIIQVNASDLDTGNNARITY 442
Score = 42.0 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--G 151
I + D NDN P F P S Y LS+PE+ +V+ V ASD D GVN+++ ++ + N
Sbjct: 1218 ISIGDVNDNAPEFRPGSCYGLSVPENSE-SSVIHTVVASDLDEGVNAEIVYSIIGGNLGN 1276
Query: 152 LFSSDLRVEWVINRSVDQ 169
FS D R + R +D+
Sbjct: 1277 KFSIDARTGELSARPLDR 1294
Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + P L + +ED+NDN+P F Q+ + E GT V V A DAD G N
Sbjct: 1688 RTTEPPFLSSYAELVVELEDENDNSPQFSQRQFVATAWEGNSKGTFVAQVQAFDADEGAN 1747
Query: 140 SKLSWNELEPNG--------LFSSDLRVEWVINRSV 167
++L ++ ++ N FS +R V++R +
Sbjct: 1748 ARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI 1783
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P P T + ++V+ + N P F + Y +I E+VP G+ V V+A N+ LS
Sbjct: 1079 PSPQHTTLSLQLLVQGSHSNPPRFLQAVYEATILENVPSGSFVLQVAAKAFHGADNANLS 1138
Query: 144 WNELEPNGLFSSDLRVEW 161
+ PNG+ V+W
Sbjct: 1139 YE--IPNGVAEDHFHVDW 1154
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + T+ L VG L R L+ ++ + + V I V D NDN
Sbjct: 1381 QFAIDGTSGLITTVGKLDRELQASYSFMVLATDCGRYEVRSSSVAV---QINVLDVNDNK 1437
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+F Y+ +P + G + V A DAD G N + + + L + +R ++ IN
Sbjct: 1438 PVFERYPYTGQVPALIQPGQTLLKVQAHDADQGANGDVLYALKADSTLTGAAMRSKFRIN 1497
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+ GT + + D NDN P FP + +S+ E +G V+ +SA+D D
Sbjct: 1801 MTGTSTIRVHIVDVNDNQPTFPPNNV-ISVSEGTELGAVIASLSANDVD 1848
>gi|126321873|ref|XP_001365666.1| PREDICTED: cadherin-7 [Monodelphis domestica]
Length = 785
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 320
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
>gi|449274416|gb|EMC83599.1| Cadherin-7 [Columba livia]
Length = 785
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 320
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F YS+ + E VGT++ V+A D D
Sbjct: 356 GPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPD 405
>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2555
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T + + R + E+ L V T PL+G C T+++ DQNDN+P
Sbjct: 488 FTINPDTGVISTAVSFDRE-KQREYTLSVTATDQAQE---PLIGICQITVLIADQNDNDP 543
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-GLFSSDLRVEWV-I 163
F S+Y + ED PVGT +A D D G NS ++++ + N F + W+ +
Sbjct: 544 KFENSRYQYFLREDTPVGTSFLRAAAHDDDQGTNSAITYSLSQQNPAYFHINPSTGWIYV 603
Query: 164 NRSVDQ 169
N+ + Q
Sbjct: 604 NQPISQ 609
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 18 SKLLESRYLHLR-PKSGMYAPAFTFSIAK----------FIANPTTRLYKNVGTLKRALR 66
+ ++E R L PK+G A T+ I + F NPTT + T+ R+L
Sbjct: 1101 TSIMEMRATDLDDPKAGKNA-ILTYRIVQNVRNEINLNLFSINPTT---GTIYTVLRSLD 1156
Query: 67 TE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
E + +L V + G L GT TI++ D ND+ P+F Y S+ E++ + +
Sbjct: 1157 REVVDRYLVVVEARDGGG----LSGTGTATIVISDVNDHPPVFTQRVYMASMSENLDINS 1212
Query: 125 VVQVVSASDADLGVNSKLSWN 145
V VV+A+D D G NS ++++
Sbjct: 1213 EVMVVAATDGDEGENSVMTFS 1233
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P T + V D NDN P F Y +S+ ED VG VV V+A+D D G N+
Sbjct: 846 GQQGQPNTDTAYVRVFVTDVNDNAPAFSQPVYEISVEEDKEVGFVVITVTANDEDEGANA 905
Query: 141 KLSWNELEPNGLFSSDLRVE 160
KL + N + + D+ E
Sbjct: 906 KLRYQITSGNTMGTFDVEPE 925
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQ 111
RL K + K RT +KVE+ I VED ND+ P+F P
Sbjct: 1257 RLKKKIDFEKPHERTFNLTVKVEDAD--------FFSLAYCIIQVEDSNDHTPVFFPQFY 1308
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLFSSDLRVEWVI 163
+ S+ EDVPVGT+V V+A D D G N + +++ E +P F D + WV+
Sbjct: 1309 EAGSMFEDVPVGTIVAQVTAMDLDSGQNGRFTYSIAPESDPFQQFLVD-KSGWVV 1362
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + + D NDN P F S Y ++PE +GT V VSA+D D G++ +++
Sbjct: 736 PLASFTTVYVNITDVNDNVPFFMSSTYEATVPEGAEIGTSVAQVSATDLDSGLHGMINY 794
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 56 KNVGTLKRA----LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIF-PV 109
K + L+R+ LR ++ L V T + + +C I+ + D N+N P+F
Sbjct: 380 KGIIKLRRSPPPRLRGPQYVLNVTATDDNAAGGALPLSSCAQVIVGINDINNNKPVFDEC 439
Query: 110 SQYSLS--IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
YS++ + E+ P GT V V A DAD GVN ++ + ++ +G
Sbjct: 440 HNYSVNALVLENQPPGTFVLRVQAHDADTGVNGEVKYGIMQRDG 483
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 97 VEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D+ND P F S YS ++PE P GT + V A D D G+N++LS+
Sbjct: 217 ITDENDCTPEFMHSIYSRDNVPETTPTGTSLLQVLARDCDTGLNAELSY 265
>gi|403267946|ref|XP_003926054.1| PREDICTED: cadherin-19 [Saimiri boliviensis boliviensis]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTASVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y LS+ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLSVSESAPTGTSIGRIMAYDNDIGENAEMEYS 294
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y S+PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEASVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|338713598|ref|XP_001917824.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8-like [Equus
caballus]
Length = 760
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 196 LDKALDREEEPELRLTLTAQDGGSP-PRSGTAQVYIEVVDINDNAPEFEQPFYRVQIPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+DAD+G N ++S++
Sbjct: 255 SPIGFLIVTVSATDADIGANGEISYS 280
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++L+++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQLTYSLLPPQ 494
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C V D NDN P +S ++ IPE+ P +VV V S SD D N
Sbjct: 320 EARDAGSFSGKCTVLTQVMDVNDNAPEVTMSAFTAQIPENSP-ESVVAVFSVSDLDSEEN 378
Query: 140 SKLSWN 145
K+S +
Sbjct: 379 GKISCS 384
>gi|441602633|ref|XP_003264372.2| PREDICTED: cadherin-19 isoform 1 [Nomascus leucogenys]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTSVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|402903310|ref|XP_003914514.1| PREDICTED: cadherin-19 [Papio anubis]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|355755093|gb|EHH58960.1| Cadherin-19 [Macaca fascicularis]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|334311073|ref|XP_001377490.2| PREDICTED: protocadherin beta-2-like [Monodelphis domestica]
Length = 817
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+H ++ T G P P GT ++V D NDN P+F S+Y + IPED P+ ++
Sbjct: 231 REEQHEFRLTLTAVDGGVP-PKSGTAQILVLVMDSNDNAPVFSQSRYDVQIPEDSPINSL 289
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N+++S++
Sbjct: 290 VVAVSAKDLDTGNNAEISYS 309
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
T +L + G L+ + + + + ++ G L G C ++V+D NDN P +S
Sbjct: 320 TFQLNEKSGELRLKQKLDFETCQSYTIDIQATDGGGLSGKCTVLVLVKDLNDNPPELTMS 379
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ SIPE++P T + V S SD D G N K+
Sbjct: 380 SLTTSIPENLP-ETAIAVFSVSDLDAGENGKI 410
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP-N 150
N TI + D NDN P+F + Y L + E+ + VSA D D G+N+K++++ L P N
Sbjct: 465 NITIHISDINDNPPVFTQTTYKLYLQENNSPALHIGSVSAKDRDSGINAKVTYSLLPPEN 524
Query: 151 G---LFS 154
G LFS
Sbjct: 525 GDLPLFS 531
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D ND+ P+F ++ L I E GTV + +A D D+G NS ++ + PN F+
Sbjct: 152 VQDINDHAPVFLDTEIILKISEITSTGTVFLLENAQDLDVGNNSLQNYT-ISPNSHFNIQ 210
Query: 157 LR 158
+R
Sbjct: 211 IR 212
>gi|109122434|ref|XP_001094512.1| PREDICTED: cadherin-19 isoform 2 [Macaca mulatta]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|397514083|ref|XP_003827330.1| PREDICTED: cadherin-19 [Pan paniscus]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|426386191|ref|XP_004059575.1| PREDICTED: cadherin-19 [Gorilla gorilla gorilla]
Length = 746
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|12656655|ref|NP_066976.1| cadherin-19 isoform 1 preproprotein [Homo sapiens]
gi|17366818|sp|Q9H159.1|CAD19_HUMAN RecName: Full=Cadherin-19; Flags: Precursor
gi|10803406|emb|CAC13126.1| cadherin-19 [Homo sapiens]
gi|37182430|gb|AAQ89017.1| CDH19 [Homo sapiens]
gi|119583582|gb|EAW63178.1| cadherin 19, type 2 [Homo sapiens]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|344258353|gb|EGW14457.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Cricetulus griseus]
Length = 979
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 196 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLR 254
Query: 129 VSASDADLGVNSKLSWN 145
V A+D D G N+ + ++
Sbjct: 255 VQATDRDQGQNAAIHYS 271
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H L V+ NP PL + + V D NDN P+F + L + E+ PVG+VV +
Sbjct: 741 HALAVDR-----GNPNPLSASVEIQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARI 795
Query: 130 SASDADLGVNSKLSWNELEPN-------GLFSSDLRV 159
A+D D G N+++ + +E N L S DLR
Sbjct: 796 KANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 832
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 546 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 605
Query: 150 NGLFSSD 156
F D
Sbjct: 606 VPQFRID 612
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T RAL E H LKV H +P T T+ V D ND++P+F S+Y I
Sbjct: 80 TTARALDRETKDTHVLKVSAVDH--GSPRRSAATY-LTVTVSDTNDHSPVFEQSEYRERI 136
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRSV 167
E++ VG V + A+D D N+ + + LE G+F D R V R+V
Sbjct: 137 RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAV 188
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 303 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 359
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 360 HIQAVDADAGENARLQY 376
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 69 EHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
EH+ VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 425 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVL 481
Query: 128 VVSASDADLGVNSKLSW 144
+ A D D NS +++
Sbjct: 482 TLRARDRD--ANSVITY 496
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 649 TTSLEILILDANDNVPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 703
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 16 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDSV 75
Query: 159 VEWVIN-RSVDQHT 171
V R++D+ T
Sbjct: 76 TGAVTTARALDRET 89
>gi|114673486|ref|XP_523961.2| PREDICTED: cadherin-19 isoform 2 [Pan troglodytes]
Length = 772
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R E L++ T G +P P GT I V D NDN P+F +Y S+ ED
Sbjct: 3141 LRRALDREREASLRLVLTALDGGDP-PRSGTAQLCINVTDANDNTPVFAQDRYRASLRED 3199
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P G+ V VSASDAD G N++++++
Sbjct: 3200 APPGSTVLNVSASDADAGTNARITYS 3225
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L +AL EE + + GT + V D NDN P+F ++Y++ +PEDV
Sbjct: 1628 LAKALDREEAAFHELVLRARAGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVPEDV 1687
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
PVG+ + V+A+DAD GVN + ++
Sbjct: 1688 PVGSTLVTVTATDADDGVNGHVKYS 1712
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT + V D NDN P+F ++Y++ +PEDVPVG+ + +V+A+DAD G+N + ++
Sbjct: 2302 GTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTIVIVTATDADEGLNGCIKYS 2358
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L +AL EE H L + T G P GT + V D NDN P+F ++Y++ +P
Sbjct: 450 LAKALDREEAAFHELMLRATD--GGEPAR-TGTARIRVEVLDANDNTPVFSQAEYTVRVP 506
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
EDVPVG+ + +V+A+D D G+N + ++
Sbjct: 507 EDVPVGSTLVIVTATDPDEGLNGYVKYS 534
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT + V D NDN P+F ++Y++ +PEDVPVG+ + V+A+DAD G N L ++
Sbjct: 150 GTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGPNGHLKYS 206
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P +GT I V D NDN P+F +Y S+ ED P G+ V VSASDAD G N++++++
Sbjct: 1862 PALGTAQLCINVTDANDNTPVFAQDRYRASLREDAPPGSTVLNVSASDADAGTNARITYS 1921
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
L++ T G +P P GT I V D NDN P+F +Y S+ ED P G+ V VSA
Sbjct: 1099 LRLVLTALDGGDP-PRSGTAQLCINVTDANDNAPVFAQDRYRASLREDAPPGSTVLNVSA 1157
Query: 132 SDADLGVNSKLSW 144
SDAD G N+++++
Sbjct: 1158 SDADSGTNARITY 1170
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT + V D NDN P+F ++Y++ +PEDVPVG+ + V A+D D G+N + ++
Sbjct: 797 GTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVIATDPDAGLNGHVKYS 853
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ AL E+ ++ + + + G L+ C + V D NDN P + S +PED
Sbjct: 2598 TLQEALDFED--MRSFSLTVEARDRGGLLAHCKVEVEVLDVNDNAPEITMLSVSSPVPED 2655
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS--------SDLRVEWVINRSVDQ 169
VP GTVV +++ +D D GVN ++S+ EL + FS D R E V+ +++D+
Sbjct: 2656 VPAGTVVALLNVNDRDSGVNGEVSY-ELSGDEHFSLAVQTGPGGDQRPELVLAKALDR 2712
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L +AL EE H L + + G P GT + V D NDN P+F ++Y++ +P
Sbjct: 2706 LAKALDREEAAFHELVLRASD--GGEPAQ-TGTARIRVAVLDANDNAPVFSQAEYTVRVP 2762
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
EDVPVG+ + V+A+D L + + S++++
Sbjct: 2763 EDVPVGSTLVTVTAADEGLNGHVEYSFHKI 2792
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 43 IAKFIANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
+ KF +P + TL+ AL R E+ L + T G +P P I V
Sbjct: 3234 LQKFAVDPEGGMI----TLQEALDFEDTREEQRELHLVLTALDGGSP-PRSAHVQIHIEV 3288
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P+F S Y S+ E+ P GT+V +SA D D G N + ++
Sbjct: 3289 VDANDNAPVFNQSTYKASVRENTPSGTLVARISAYDLDDGPNGDIVYS 3336
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK----LSWNELEPNGL 152
V D NDN P+F ++YS +PE+ G +V V A DAD G N++ L LE NG
Sbjct: 1015 VLDVNDNAPVFAEARYSARLPENNAAGALVLRVRAWDADWGQNARVRNSLQGYALEANGY 1074
Query: 153 FSSDLR 158
F+ +++
Sbjct: 1075 FAVEVK 1080
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 91 CNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
C++ ++ V D NDN P+F ++YS +PE+ G +V V A DAD G N+++ + EL
Sbjct: 687 CSSAVLWLRVLDVNDNAPVFAEARYSARVPENNAEGALVLRVRAWDADWGQNARVRY-EL 745
Query: 148 EPNGLFS--------SDLRVEWVINRSVDQ 169
+ FS D R E V+ +++D+
Sbjct: 746 SGDEHFSLAVQTGPGGDQRPELVLAKALDR 775
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
G LV I V D NDN P ++ S +PE+ PVGTVV ++ +D D G N +S
Sbjct: 1966 GGLVAHSKVEIEVLDVNDNEPEITLTLVSSPVPENAPVGTVVAFLNVNDPDSGENGDVS 2024
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
G L+ C + V D NDN P ++ S +P D PVGTVV +++ D D N ++S
Sbjct: 1216 GGLLAHCEVDVEVLDVNDNEPEMTLTSVSSPVPADAPVGTVVALLNVYDPDSRENGEVS 1274
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
K KG+ PG V C + V D NDN+P V+ +PED GTVV ++S +D D
Sbjct: 3379 KDKGAVPG--VAHCKVLVEVVDVNDNSPEVTVTSVYSPVPEDAAPGTVVALLSVTDLD 3434
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 60 TLKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL R+L E + ++E H G G L TI V D NDN P VS I E
Sbjct: 228 TLVRSLDYEKDDSYEMEVQTHDG---GGLFDKTKVTITVTDVNDNPPEITVSSAVSEISE 284
Query: 119 DVPVGTVVQVVSASDADLGVNSKL 142
D P GT+V ++ D D G N ++
Sbjct: 285 DAPPGTMVALLYVQDRDSGANGEV 308
Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 56 KNVGTLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
K TL R+L EE + L+V+ + G L T I+V D NDN P V
Sbjct: 1730 KGAITLVRSLDFEEGDSYELEVQ-----ARDGGVLFDTARVAIVVTDVNDNMPEISVRSA 1784
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
I ED P GTVV ++ D D G N ++
Sbjct: 1785 RSKISEDSPPGTVVALLHVQDRDSGANGEV 1814
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P+F ++YS +PE+ G +V V A DAD G N+++ +
Sbjct: 368 VLDVNDNAPVFAEARYSARVPENNAAGALVLRVRAWDADWGQNARVRY 415
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
V D NDN P+F ++YS +PE+ G +V V A DAD G N+++
Sbjct: 2520 VLDVNDNAPVFAEARYSARLPENNAAGVLVLRVRAWDADWGQNARV 2565
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
V D NDN P+F ++YS +PE+ VG V V A D DLG N
Sbjct: 2950 VLDVNDNAPVFAEARYSARLPENNAVGAPVLRVRAWDTDLGQN 2992
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S PL + V D NDN P Y + + E+ G + +SA+D DLG N
Sbjct: 3484 RDSGSPPLSAVKQILVQVSDVNDNAPKTSQDSYDVYVLENNVPGIPILNISATDPDLGRN 3543
Query: 140 SKLSWNELEPNGLFS 154
+ LS++ L+ +FS
Sbjct: 3544 AHLSYSLLQAGHIFS 3558
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 27/58 (46%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G L T I V D NDN P V I ED P GTVV ++ D D G N ++
Sbjct: 579 GGLSDTARVAITVTDINDNAPEVSVRSALREISEDAPSGTVVALLHVQDRDSGANGEV 636
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L T TI V D NDN P V I ED GTVV ++ D D G N
Sbjct: 2398 QARDSGGLFDTAKVTITVTDVNDNAPKISVRSSLSEISEDAQSGTVVALLHVQDRDSGAN 2457
Query: 140 SKL 142
++
Sbjct: 2458 GEV 2460
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 60 TLKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL R+L EE +VE G G L T I V D NDN P V + E
Sbjct: 875 TLVRSLDFEEGDTYEVEVQARDG---GELFDTAKFVITVTDVNDNPPELTVMSQLSEVSE 931
Query: 119 DVPVGTVVQVVSASDADLGVNSKL 142
D P GTVV ++ D D G N ++
Sbjct: 932 DSPSGTVVALLHVQDWDSGPNGEV 955
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 26/58 (44%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G L TI V D NDN P V I ED P G VV ++ D D G N ++
Sbjct: 2833 GDLSNMAKVTITVSDVNDNAPEISVRSSLSEISEDSPAGIVVALLHVQDRDSGPNGEV 2890
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+D NDN+P F I E G + A DAD+G NS L ELE NG F+ ++
Sbjct: 3069 QDINDNSPRFLKENMQFEIIESTIPGARFYLGMAEDADVGSNS-LQGYELEANGYFAVEV 3127
Query: 158 R--------VEWVINRSVDQ 169
+ E V+ R++D+
Sbjct: 3128 KESPDGSKFAELVLRRALDR 3147
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV--VSASDADLGVNSKLSW 144
V D NDN P+F + YS + E+ G V V A DAD G N ++S+
Sbjct: 1333 VSDVNDNAPVFEEAAYSAYVAENNAAGAPAPVLRVLAQDADSGANGRVSY 1382
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P+F + YS + E+ G + V A D D G N ++S+
Sbjct: 2083 VSDVNDNAPVFEEAAYSAYVAENNAAGAPMLRVLARDPDAGSNGRVSY 2130
>gi|390481094|ref|XP_003736070.1| PREDICTED: protocadherin beta-16-like [Callithrix jacchus]
Length = 839
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 228 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTTQVRIEVVDSNDNAPEFEQPIY 286
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 287 KVQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEV 333
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 359 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 417
Query: 140 SK 141
K
Sbjct: 418 GK 419
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
V D ND++P+F + L +PE+ P+GT + A D D+G N+ ++ ++ PN F
Sbjct: 162 VIDTNDHSPVFTEKEVVLKLPENTPLGTEFPLNHAVDMDVGSNNVQNY-KISPNSHF 217
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 475 SVTVQISDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 533
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVE--NTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P T + G L R R E + L++ + KG++ PL + V+D NDN
Sbjct: 925 FRVDPVTGVLSVFGRLDRE-RQEIYELRIRARDNGGKGTDTPPLYSDALVRVTVDDVNDN 983
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSD 156
P F +S Y++ I EDVP+ TVV VV A+D D G + + + +E G F D
Sbjct: 984 APTFALSSYTVKIREDVPIWTVVAVVDATDPDEGAGGDVEYFLSDAMESEGFFKVD 1039
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K VG L R E K T H P + I++ D NDN
Sbjct: 3114 KFSLDKETGVLKTVGQLDR-----ESQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDN 3168
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLF 153
P F + YS ++PEDV VGT+V V A+D D+G+N K+ + ++ +G F
Sbjct: 3169 PPKFTMQTYSATLPEDVEVGTLVTKVHATDDDIGINRKIRYEFIDSADGQF 3219
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVE--DQNDNNPIFPVSQYS 113
NV L R R + + L+V T +G ++ +TTI+V D ND NP+F ++Y
Sbjct: 133 NVDVLNRE-RKDRYVLEVRATASRGDGKNRIIILEADTTIVVTVLDTNDLNPLFYPTEYE 191
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+I ED + + V A DADLG N ++ ++ E F+
Sbjct: 192 ANITEDTSLHRSILRVMAEDADLGRNGEIYYSFAEETDQFA 232
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 39 FTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
FTFSI F+ N TT L G EH L+V T P L T
Sbjct: 1234 FTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEV--TVRDDGRPS-LSSTTR 1290
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D ND+ P F Y++ IP + V A+D D+G N K+ ++
Sbjct: 1291 VVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLANDKDIGDNGKIQYS 1343
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T + +K L E+ K N +N CN + V D+NDN P
Sbjct: 1764 FFVNPSTGII----VIKNELDYEKR--KFYNLTVAATNMAGAKAQCNVIVHVLDRNDNAP 1817
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE 148
F + Y+ I E +G++V V+ A DAD +N+ L+++ +E
Sbjct: 1818 KFLQATYTGEISEGASIGSLVLTNTSSPLVIKAEDADSELNALLNYDIVE 1867
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--------- 145
I V D NDN+P F S+ + I E+ P GT V ++A D D G N+ +S++
Sbjct: 498 INVVDTNDNDPTFEQSEMDVWIDENEPAGTSVVKITAKDRDSGENAYISYSIDNIQKVPF 557
Query: 146 ELEPNGLFSSDLRVEWVIN 164
E++P FS +R + V++
Sbjct: 558 EIDP---FSGIVRTKQVLD 573
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+I+V D ND P F Y++S+ E P GT V VS+ D D G+N ++ +
Sbjct: 2328 SILVLDVNDCPPEFTQDSYNISVSEAAPFGTSVLKVSSRDNDTGINQQVRY 2378
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y S+ ED +G
Sbjct: 3343 RARDYFLTIQAID--GGIP-PLSNHATVNITVIDSNDNAPIFSEVSYRASVREDAKIGEK 3399
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D N +S+
Sbjct: 3400 VTQVFANDLDSEENGNVSY 3418
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T+ V D+ND+ P F + Y + + E++ GT + + A D DLG N ++ ++
Sbjct: 2839 PLTALAEITLQVLDENDHAPKFESNPYGIILAENIEEGTSILKIIAHDDDLGSNGEVRYS 2898
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LKR+L E H L T + + V D NDN P F Y+ S+ E
Sbjct: 2402 LKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHA 2461
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
G V VVSASD D V+ KL++
Sbjct: 2462 ERGQFVTVVSASDPDY-VDEKLTY 2484
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 62 KRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
K AL E +WL V H PL + + V D+NDN P+ V Y S+PE
Sbjct: 1155 KAALDVESKRGYWLTVYAQDH---GVVPLSSSLQVYVEVLDENDNTPLTEVPVYYPSVPE 1211
Query: 119 DVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLF 153
+ P G V + A D D+ S P G F
Sbjct: 1212 NSPAGVSVLQIRAFDRDVSPQQFTFSITSGNPEGYF 1247
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNS 140
I V D NDN P+F +S Y+ + ED P+G TV+Q V +DAD+ N+
Sbjct: 3474 IEVLDANDNPPLFSLSNYTAVVQEDKPLGHTVLQFV-VTDADIEPNA 3519
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN P+F Y + +PE P+ T V + +DAD G N+
Sbjct: 395 DLNDNAPVFNREIYEVKVPETAPINTPVIRLKVTDADEGKNA 436
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 3266 VQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYS 3314
>gi|326917391|ref|XP_003204983.1| PREDICTED: cadherin-7-like [Meleagris gallopavo]
Length = 758
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 182 GIIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 241
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 242 YNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 293
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 76 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 135
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 136 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 176
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F YS+ + E +GT++ V+A D D
Sbjct: 329 GPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKIGTIIGTVAAHDPD 378
>gi|395504762|ref|XP_003756716.1| PREDICTED: protocadherin gamma-A2 [Sarcophilus harrisii]
Length = 854
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R E+H L + G P L GT + V D NDN P+F S YS+++PE+
Sbjct: 196 LEQALDREEQHNLHMVLLARDGGQP-VLSGTVRIRVTVLDANDNAPVFTQSVYSVNVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VP GTV+ V+A+DAD G NS++ +
Sbjct: 255 VPQGTVLLTVNATDADEGSNSQVRY 279
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
D NDN P F + L I E +GT + SA DAD+GVN+ L ++ PN FS
Sbjct: 125 DINDNAPSFQEEELELKISELTALGTQFILESAYDADVGVNA-LQGYKMSPNHHFS 179
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
L G + V D NDN P ++ + SIPE+ P GTV+ + D D G N +
Sbjct: 327 LKGRTKIHVTVLDVNDNAPEVTITSVTNSIPENAPPGTVIALFHVHDRDAGENGQF 382
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPE 118
+ RAL E+ + V N + + G + +T I+ V D NDN P F S YS I E
Sbjct: 406 IDRALDREQ--VSVYNITVRVEDFGSPALSTDTHILLQVADINDNPPTFSQSAYSAYIQE 463
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ P G + ++A D D N+ ++++ +E N
Sbjct: 464 NNPRGASIYSLTAHDPDSEQNALITYSIMESN 495
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN-----PIFPV---SQYSLSIP 117
++ E L+V T +P PL + T+ + DQNDN P FP S L+ P
Sbjct: 526 QSREFQLRV--TARDSGDP-PLSSNVSLTLFILDQNDNTPEILYPTFPTDGSSGVELA-P 581
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
G +V V A DAD G N+ LS++ L+ GLFS L
Sbjct: 582 RSAEPGYLVTKVVAVDADSGQNAWLSYHLLKATEPGLFSVGL 623
>gi|350581230|ref|XP_003354374.2| PREDICTED: protocadherin beta-15-like [Sus scrofa]
Length = 799
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ L++ T G +P P GT I++ D NDN P F + Y
Sbjct: 189 RKYPELVLDKELDREEQAELRLTVTALDGGSP-PRSGTAQVRILIVDVNDNAPEFAQTHY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PED PVGT+V VSA D D G N ++S++
Sbjct: 248 QVQVPEDSPVGTLVVKVSARDLDAGTNGEISYS 280
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F Y+L + E+ + V A+DAD G N++L+++ L P+
Sbjct: 436 NLTVRVADVNDNAPAFSQPAYTLRVRENNSPALHIGTVRATDADAGANAQLTYSLLPPS 494
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+G ++V D ND++P FP + +L I E P GTV + A D D+G N+ +++ +
Sbjct: 114 MGVFRAELLVRDINDHSPEFPEREMTLKIVETSPPGTVFPLKKAQDLDVGNNNIQNYS-I 172
Query: 148 EPNGLFSSDLR 158
PN F R
Sbjct: 173 SPNSYFHVSTR 183
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G L G C+ +I V D NDN+P +S + IPE+ P T V + D D G N
Sbjct: 321 ASDGGGLSGKCSVSIEVVDVNDNSPELTISSLTSPIPENAP-ETEVALFRIRDRDSGDNG 379
Query: 141 KL 142
++
Sbjct: 380 RM 381
>gi|16198418|gb|AAH15877.1| CDH19 protein [Homo sapiens]
Length = 390
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 142 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 199
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 200 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 239
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 81 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 140
Query: 152 LFS 154
FS
Sbjct: 141 YFS 143
>gi|441602639|ref|XP_004087746.1| PREDICTED: cadherin-19 isoform 3 [Nomascus leucogenys]
Length = 541
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTSVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|410052750|ref|XP_003953343.1| PREDICTED: cadherin-19 [Pan troglodytes]
Length = 541
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|441602636|ref|XP_004087745.1| PREDICTED: cadherin-19 isoform 2 [Nomascus leucogenys]
Length = 490
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTSVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S ++F NP T L R L + L V T G P PL T + I V D N
Sbjct: 851 SASEFTINPQTGAITTTRPLDREL-IPAYLLTV--TARDGGVP-PLSDTTDVEISVTDVN 906
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN+P+F QY SIPEDV VGT V VSA+DAD +N ++ + + + +G F+ D
Sbjct: 907 DNSPVFEAPQYQGSIPEDVLVGTSVLRVSATDADTDLNGRVRYALDDDGDGAFAVD 962
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + V D N+ +P+F + YS+S+ ED P+GT V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNA 837
Query: 141 KLSWNELEPNG 151
+++++ L+ +G
Sbjct: 838 QVTYS-LDTDG 847
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P G+ + V D ND+ P F +Y S+ E VPVG+ V V A+D D G N++L ++
Sbjct: 345 PRTGSTTLQVNVLDANDHAPNFEWPEYDASVREGVPVGSTVVTVKATDQDAGRNAELEYS 404
Query: 146 EL 147
L
Sbjct: 405 IL 406
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V+D NDN P F S + S+ E+V +G + + A DAD G N+++ +
Sbjct: 580 VKDVNDNAPRFYTSHFQESVSENVAIGCSILRIQAYDADEGANAQIKY 627
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSW 144
T N T++V D NDN P F YS+ IPED+ V+ + A+DAD G N+ + +
Sbjct: 464 TANATLVVRVLDDNDNYPQFTERTYSVWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
S P + + V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 676 SGEAPKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVTATDPD 729
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T TI +ED ND+ P F + L I E+ PVG+ V + A D D G N+ + ++
Sbjct: 996 LSTTVPVTIKIEDINDSPPAFENDKIVLYIAENSPVGSTVGEIYAHDPDEGPNAVVQYS 1054
>gi|348545824|ref|XP_003460379.1| PREDICTED: cadherin-7-like [Oreochromis niloticus]
Length = 701
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLK 73
H S L Y + PKSG+ A + R LR +H+L
Sbjct: 266 HLVYSILQGQPYFSVEPKSGVVRTALP-------------------DMDRELR--DHYLL 304
Query: 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
V K G L GT T+++ D NDN P FP Y S+PE V VV + A D
Sbjct: 305 VIQAKDMIGQMGGLSGTTTVTVMLTDVNDNPPRFPRKSYQFSVPESTLVSAVVAKIKALD 364
Query: 134 ADLGVNSKLSWNELEPNGL 152
AD G N+++ + L+ +GL
Sbjct: 365 ADAGPNAEMDYRILDGDGL 383
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---------LGV 138
VG + V D NDN P FPV +Y I E+ G +++ +SA D D +
Sbjct: 539 VGKAVVLVSVTDVNDNAPSFPV-EYQTFICENAQPGQIIETLSAVDLDEPKNGHHFLFSL 597
Query: 139 NSKLSWN 145
+K +WN
Sbjct: 598 AAKAAWN 604
>gi|410052748|ref|XP_003953342.1| PREDICTED: cadherin-19 [Pan troglodytes]
Length = 490
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|402534574|ref|NP_001257957.1| cadherin-19 isoform 2 preproprotein [Homo sapiens]
Length = 490
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 91 CNTTI--IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
CN++I ++ D NDN P+F Y L++PED P G +V V A D DLGVN +LS++ ++
Sbjct: 3000 CNSSIEVLLSDVNDNPPVFGQKAYELALPEDTPAGRLVAHVHALDRDLGVNRRLSYSFVQ 3059
Query: 149 PNGLFSSD-----LRVEWVINR 165
+G FS D +R+E ++R
Sbjct: 3060 ADGHFSIDAHSGLVRLEQPLDR 3081
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
F S +F + T L G L R + H L V T G+ PL T +I+V
Sbjct: 840 FILSSEQFHLDSETGLLTVKGPLDRE-HHDRHLLTV--TVADGALEDPLSSTATVSIVVR 896
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P F + Y + I ED+P+G +V V A DAD G N ++ ++
Sbjct: 897 DVNDNAPHFARAPYVVRIREDLPIGALVTSVHAEDADFGDNGRVQYS 943
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
C I V D+ND +P+F + Y++++PED P+ V+ ++A D D+GVN ++ + LEP+
Sbjct: 127 CEVLIRVTDKNDLSPLFFPTWYNVTVPEDTPIHNVLVKLNAYDPDMGVNGEIYYRLLEPS 186
Query: 151 GLFS 154
F+
Sbjct: 187 RQFA 190
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 86 PLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P T T + V D NDN P+F YS I ED P GT V + A+DAD G N++L +
Sbjct: 781 PPRSTSQTMFVRVLDVNDNAPLFEKPAYSFVINEDAPNGTSVARLRAADADQGRNAELHF 840
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--S 154
V D NDN P+F S+Y L +PED GTVV + DAD E P G + S
Sbjct: 2806 VLDVNDNPPVFEHSRYQLQVPEDAVAGTVVASLHIEDAD---------RETAPVGFYVLS 2856
Query: 155 SDLRVEWVINRSVD 168
DL ++ + S D
Sbjct: 2857 GDLGQQFAVRSSGD 2870
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
V T I V D NDN PI S+Y+ + E + VGT + V A+DAD
Sbjct: 2897 VATTQLEITVLDSNDNPPICLKSKYTELVSESIAVGTAILTVEATDAD 2944
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T + L VE G P PL + V D NDN P+F YS ++ ED G +V
Sbjct: 3190 TPSYQLAVE--ARDGGEP-PLSARAWLNVSVLDANDNAPVFG-GPYSATVTEDASPGQLV 3245
Query: 127 QVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V ASDAD G +L + L P G FS D
Sbjct: 3246 LQVQASDADSG--GELRYTLLHP-GPFSLD 3272
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSW 144
PL + + V+D ND+ P F Y+ ++ E PVG+ + + A+ D+GVN+++++
Sbjct: 3100 PLASRTHLAVTVQDINDSPPEFTQQMYAAAVSEVAPVGSPISAAIKATSRDVGVNAQITY 3159
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ V D NDN P F ++Y +SI + VGT + V A D D G + S +E N
Sbjct: 2508 VAVTDVNDNEPTFGAAEYEVSIWTNTSVGTTLLKVRAFDQDQGNWLRYSLHEAPSN 2563
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
TI V+D ND P+F S Y++S+ E PV + + V ASD D
Sbjct: 2203 TINVQDVNDCAPLFEQSWYNVSVSEATPVASPLLEVRASDRD 2244
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L T+ V D ND+ P+F + + E+ PVGT + V A D D N +S+
Sbjct: 432 GRLQAVATVTVRVFDCNDHAPVFDPMPVEVLLDENRPVGTKIFTVHAHDEDEAENGYVSY 491
Query: 145 NELEPNGL------FSSDLRVEWVINRSVDQHT 171
+ + N + FS ++ V++ +H+
Sbjct: 492 SLVNLNAVPFSVDPFSGEISTTEVLDYETMRHS 524
Score = 36.2 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 54 LYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
L + G L AL +++H L V G P G ++V D ND+ P F
Sbjct: 1453 LDSDTGVLSLALPLDHEASQQHLLTVAVRDSGG--PVTRRGFARVRVLVTDHNDHAPEFL 1510
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSD 156
++Y + + E GT + + A D D G N+ L+++ N LFS D
Sbjct: 1511 QARYEVRVSETAAPGTALLQLGALDRDRGPNALLTFSIASGNMGSLFSLD 1560
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R H L V T G++ T+ V D ND+ P F Y ++ E P G+
Sbjct: 1675 RAAVHRLVVRATNLAGTS-----ALARVTVQVLDCNDHAPHFRQLLYRGTVSEAAPAGSA 1729
Query: 126 VQ------VVSASDADLGVNSKLSWNELE 148
V VV+A D D G+N++L+++ +E
Sbjct: 1730 VLRGSQPLVVAAHDEDTGINAQLTFSIVE 1758
>gi|301753531|ref|XP_002912649.1| PREDICTED: protocadherin beta-10-like [Ailuropoda melanoleuca]
Length = 799
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R ++H L + T G +P P GT I++ D NDN P F + Y PE+
Sbjct: 196 LDKALDREKQHELTLTLTALDGGSP-PRSGTTTIRIVILDINDNAPQFSQTIYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA D D GVN+ +S++ + S D+R + IN
Sbjct: 255 SPVGSLIAKVSAGDVDSGVNADISYSLFDA----SEDIRTTFQIN 295
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 493
>gi|297702776|ref|XP_002828343.1| PREDICTED: cadherin-19, partial [Pongo abelii]
Length = 609
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|334347606|ref|XP_003341948.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Monodelphis domestica]
Length = 2974
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P T + + + R E+ L VE +G NPGP T I+VED+NDN
Sbjct: 399 GAFKIDPRTGVVRTRSVVDRE-EVAEYQLLVE-ANDQGLNPGPRSATATVRILVEDENDN 456
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F +Y + +PEDV V T + V A+D D G N+ L ++
Sbjct: 457 YPQFSEKRYVVQVPEDVAVNTAILRVQATDQDQGQNAALHYS 498
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + V D NDN P+F + L + E+ PVG+VV + A+D D G N
Sbjct: 971 RGS-PAPLSASVDVQVTVLDINDNPPVFEQDELELFVEENSPVGSVVARIRAADPDEGPN 1029
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E N L S DLR
Sbjct: 1030 AQIMYQIVEGNVPEVFQLDLLSGDLRA 1056
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
SI F + T N L R + + H LKV H G T+ V D N
Sbjct: 293 SIGFFHIDSDTGAISNSRPLDRETK-DTHVLKVTAVDHGSPQRS---GATYLTVTVSDTN 348
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVE 160
D++P+F +Y ++ E++ VG V + A+D D N+ + + LE +G F D R
Sbjct: 349 DHSPVFEQVEYRETVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGADGAFKIDPRTG 408
Query: 161 WVINRSV 167
V RSV
Sbjct: 409 VVRTRSV 415
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I V D N + P+F S Y++S+ ED PVG+ + +SA+D D G N+++++
Sbjct: 770 TAQVFINVTDANTHRPVFQSSHYTVSVREDKPVGSSIATISATDEDTGENARITY 824
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + + V D NDN PIF S + ++ E+VP+G V
Sbjct: 530 EYTLRIK--AQDGGRP-PLINSSGLVNVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 586
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 587 HIQAIDADSGENARLHY 603
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 873 TTSLEILIVDANDNAPRFLRDLYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 927
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
E + VE H +P + + + I V D NDN+P F Y L + ED VG+ V
Sbjct: 648 AEHYSFGVEAVDH--GSPA-MSSSASVAITVLDVNDNDPAFTQPVYELRLNEDAAVGSSV 704
Query: 127 QVVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 705 LTLRARDRD--ANSVITYQ 721
>gi|194384288|dbj|BAG64917.1| unnamed protein product [Homo sapiens]
Length = 490
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDVNDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|397518012|ref|XP_003829194.1| PREDICTED: protocadherin beta-16 [Pan paniscus]
Length = 776
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELMLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEV 294
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQLTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D ND++P+F + L IPE+ P+GT + A D D+G N+ ++ ++ PN F+
Sbjct: 123 VIDINDHSPMFTEKEMLLKIPENSPLGTEFPLSHALDLDVGSNNVQNY-KISPNSHFA 179
>gi|410948479|ref|XP_003980966.1| PREDICTED: protocadherin beta-10 [Felis catus]
Length = 660
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R ++H L + T G +P P GT I++ D NDN P F + Y PE+
Sbjct: 195 LDKALDREKQHELSLTLTALDGGSP-PRSGTTTIRIVIVDINDNAPQFSQTMYETQAPEN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA D D GVN+ +S++ + S D+R + IN
Sbjct: 254 SPVGSLIAKVSAGDIDSGVNADISYSFFDA----SEDIRETFQIN 294
>gi|345323234|ref|XP_003430691.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Ornithorhynchus anatinus]
Length = 859
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + + R EH L VE +G +PGPL T I VED+NDN P
Sbjct: 191 FEIDPRTGVVRTRAAVDRE-EAAEHRLLVE-ADDRGRDPGPLSATATVRIAVEDENDNYP 248
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE--PNGLF 153
F +Y + +PEDV T V V A+D D G N+ L + + P+G F
Sbjct: 249 QFSEGRYVVRVPEDVAPDTAVLRVRATDRDRGRNAALLYGIVSGNPDGRF 298
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ H LKV T + P P T+ V D ND+ P+F ++Y ++ E++ +G V
Sbjct: 108 DTHVLKVTATDQ--ARP-PRSAVTYLTVTVGDTNDHRPVFEQAEYRETVRENLELGYEVL 164
Query: 128 VVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRS 166
V ASD D N+ L + LE G F D R V R+
Sbjct: 165 TVRASDGDAPANADLRYRLLEGAGGAFEIDPRTGVVRTRA 204
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+V+ G P PL+ + ++ V D NDN PIF S + S+ E+ P G V
Sbjct: 320 EYTLRVK--AQDGGRP-PLINSSGLVSVRVLDVNDNAPIFVSSPFQASVLENAPPGHSVL 376
Query: 128 VVSASDADLGVNSKLSW 144
V A DAD G N++LS+
Sbjct: 377 HVQAVDADSGENARLSY 393
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R R E + VE H L + + ++ V D NDN+P F Y L + ED
Sbjct: 421 LDREAR-ERYSFGVEAVDHGAP---ALSASASVSVTVLDVNDNDPAFTQPAYELRLNEDA 476
Query: 121 PVGTVVQVVSASDAD 135
VG+ V + A D D
Sbjct: 477 AVGSSVLTLRARDRD 491
>gi|327269958|ref|XP_003219759.1| PREDICTED: cadherin-7-like [Anolis carolinensis]
Length = 785
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GIIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++PE +PV +VV + A+DAD+G N+++ + ++ +GL
Sbjct: 269 YNVPESLPVASVVARLKAADADMGPNAEMEYKIVDGDGL 307
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F Y++ + E VGTV+ V+A D D
Sbjct: 356 GPFSDMTTVKIIVEDV-DEPPVFTSRLYTMVVSEAAKVGTVIGTVAAHDPD 405
>gi|126291023|ref|XP_001377899.1| PREDICTED: protocadherin gamma-A5 [Monodelphis domestica]
Length = 846
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE ++ G +PG L GT ++V D NDN P+F S YS+S+ E+
Sbjct: 195 LERALDREEESVHQLILKALDGGDPG-LSGTARIRVLVLDANDNAPVFTQSMYSVSVREN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT++ V+A+D+D G+N +++++
Sbjct: 254 VPKGTLLLAVNATDSDEGINGEVTYS 279
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSAS 132
K+ + +G + G L+ + + V D NDN P V+ +S SIPE+ P GTV+ ++
Sbjct: 312 KIYEMEIQGEDGGGLLTSAKVLVRVLDVNDNPPEVMVTSFSSSIPENSPPGTVIALLKVH 371
Query: 133 DADLGVNSKLSWN 145
D D G N ++ +
Sbjct: 372 DRDSGNNGHITCS 384
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L + ++ VED NDN P F + YS IPE+ P G+ + V ASD+D NS+++++
Sbjct: 431 LSANTHISLQVEDINDNPPHFSQTSYSAYIPENNPRGSSIYSVIASDSDTEENSRITYS 489
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 39 FTFSIAKFI---ANPTTRLYKNVGT-LKRALRTEEHW----LKVENTKHKGSNPGPLVGT 90
T+SI+ +I A+ ++ + N T + ALR+ ++ L+++ T +P PL
Sbjct: 486 ITYSISDYIFYGASLSSYISINSETGVLYALRSFDYEQFRDLQLQVTAKDWGDP-PLCSN 544
Query: 91 CNTTIIVEDQNDNNP--IFPVSQYSLSI-----PEDVPVGTVVQVVSASDADLGVNSKLS 143
+ T+ + DQNDN P ++P S P G +V V DAD G N+ LS
Sbjct: 545 VSLTLFILDQNDNAPEILYPTFPTDGSTGVELAPRSAEPGYLVTKVVVVDADSGQNAWLS 604
Query: 144 WNELEPN--GLFSSDL 157
++ L+ GLFS DL
Sbjct: 605 YHLLKATDPGLFSVDL 620
>gi|269914099|ref|NP_001013028.2| protocadherin beta 16 precursor [Pan troglodytes]
Length = 776
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELMLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQLTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
>gi|281345411|gb|EFB20995.1| hypothetical protein PANDA_000352 [Ailuropoda melanoleuca]
Length = 1951
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + KR R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 863 YPELALEKRLDREQQSYHRLILTALDGGDP-PLSGTTELRIQVTDANDNAPVFSQDVYRV 921
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 922 SLRENVPPGTAVVQVSATDQDEGINSEITYSFYRTGRVFS 961
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T S PL + T+ + D NDN P+F + Y + + E
Sbjct: 1076 GTLDRE-QTPEYNVTITATDRGKS---PLSSSTTITLHITDVNDNAPVFHQASYVVHVAE 1131
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSASD DLG N ++S+ ++LEP L S
Sbjct: 1132 NNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALAS 1171
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKH-------KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
GTL L E+ + E H G +P T + + V D NDN P+F +
Sbjct: 1568 GTLHPELVLEQALDREEEAAHHLVLIAWDGGDPR-RSSTVHIHVTVLDTNDNAPVFALPI 1626
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
Y + +PE+V +GT + VSASD D G N ++++
Sbjct: 1627 YRVKVPENVSLGTRLLAVSASDPDEGANGEVTY 1659
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKH-------KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
GTL L E+ + E H G +P T + + V D NDN P+F +
Sbjct: 188 GTLHPELVLEQALDREEEAAHHLVLIAWDGGDPR-RSSTVHIHVTVLDTNDNAPVFALPI 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
Y + +PE+V GT + VSASD D G N ++++
Sbjct: 247 YRVKVPENVSPGTRLLAVSASDPDEGANGEVTY 279
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V D NDN P FP YS IPE+ P G + V A D D G N++++++ E
Sbjct: 439 TLYVADINDNPPTFPQVSYSAYIPENNPRGASIFTVMAQDPDSGRNAQVTYSVTE 493
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I + D NDNNP F V + I E P GT + A D D+G+NS S+ +L P+ FS
Sbjct: 121 IEITDINDNNPKFQVENLEMKINEISPPGTRYPLPEAVDPDVGMNSLRSY-QLSPHRHFS 179
Query: 155 SDLRV--------EWVINRSVDQH 170
D++ E V+ +++D+
Sbjct: 180 LDVQTGDDGTLHPELVLEQALDRE 203
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 49 NPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+P + +N G + A + + + + G L+G I VED NDN P
Sbjct: 1669 SPLFQFNENTGEISTAESLDYEECAFYEMEIQAEDVGALLGRTKVLISVEDMNDNRPEVI 1728
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++ + E+ GTV+ ++ D D G N L N L +F
Sbjct: 1729 ITSLFSPVLENTLPGTVIAFLNVYDRDSGKNVYLPENNLRAIFIF 1773
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 49 NPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+P + +N G + A + + + + G L+G I VED NDN P
Sbjct: 289 SPLFQFNENTGEISTAESLDYEECAFYEMEIQAEDVGALLGRTKVLISVEDVNDNRPEVI 348
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + E+ GTV+ ++ D D G N ++ N
Sbjct: 349 ITSLFSPVLENTLPGTVIAFLNVYDRDSGKNGQVVCN 385
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V+D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 1218 VLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVL 1277
Query: 148 EPN--GLFSSDLR 158
+ + GLFS LR
Sbjct: 1278 QASEPGLFSLGLR 1290
>gi|350581203|ref|XP_003480987.1| PREDICTED: protocadherin beta-16 [Sus scrofa]
Length = 598
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE + + T G +P P GT I V D NDN P F S Y
Sbjct: 189 RKYPELVLDKELDREEEPEISLILTALDGGSP-PRYGTAQLRIEVVDSNDNAPEFEQSLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ +PE+ PVG++V VSA+DAD GV K+S+ +P+ S L V
Sbjct: 248 KVHVPENSPVGSLVVTVSATDADSGVYGKISYTFFQPSEDISKTLEV 294
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F Y+L + E+ V V A+DAD G N++L+++ L P+
Sbjct: 436 NLTVRVADVNDNAPAFSQPAYTLRVRENNSPALHVGTVRATDADAGANAQLTYSLLPPS 494
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P V+ + IPE+ P +VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVMDVNDNPPKVTVTALNSPIPENSP-RSVVAVFSVSDLDSGDN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN+P F + L IPE+ P+G + +A D D+G N+ ++N
Sbjct: 123 VQDINDNSPTFAEREMILKIPENSPLGIAFPLSNALDLDVGSNNVQNYN 171
>gi|348572630|ref|XP_003472095.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-8-like [Cavia porcellus]
Length = 799
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLSDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|449284111|gb|EMC90692.1| Neural-cadherin [Columba livia]
Length = 2537
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + R + E+ L V T PL+G C T+++ D NDN+P
Sbjct: 491 FSIDPDTGVITTTQSFDRE-QQREYTLSVTATDQAQE---PLIGVCQVTVLIADVNDNDP 546
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
F S+Y + ED PVGT V+A D+D G N+ ++++ LE
Sbjct: 547 KFENSRYQYFLSEDTPVGTSFLRVAAHDSDQGANAAITYSMLE 589
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 25 YLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENT-KHKGSN 83
YL L+ SG Y F P T + + R R + ++V++ + +
Sbjct: 797 YLILKDASGDYQ--------FFTIEPETGVISTHASFDREKRAS-YLIEVQSQDSSESAR 847
Query: 84 PG----PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PG P T I V D NDN P FP S Y +SI ED VG+ V +A D D G N
Sbjct: 848 PGVHGHPNTDTAYVRIFVSDVNDNAPAFPRSVYEVSIDEDRDVGSPVVTATAHDEDEGAN 907
Query: 140 SKLSWN 145
+KL +
Sbjct: 908 AKLRYQ 913
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 92 NTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NEL 147
+ I VED ND+ P+F P S ++ ED PVGT V VSA D D G+N + S+ N+
Sbjct: 1291 HCVIYVEDSNDHAPVFYPQSYEVAALVEDAPVGTKVVQVSAVDLDSGLNGRFSFHLLNKS 1350
Query: 148 EPNGLFS 154
+P G FS
Sbjct: 1351 DPCGQFS 1357
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + V D NDN P F S Y +S+PE VGT V V A D D G++ ++ +
Sbjct: 739 PLASFTTVCVNVTDVNDNVPFFVSSNYEVSVPEGADVGTSVVQVLAMDLDSGLHGQVHY 797
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQY---SLSIPEDVPVGTVVQVVSASDADLGVNS 140
P PL + V D N+N P+F Y S + E+ P GT V V A DADLGVN
Sbjct: 416 PTPLSSFAEVIVGVNDINNNKPVFRECAYYSDSTWVLENQPPGTYVLQVEAHDADLGVNG 475
Query: 141 KLSWNELEPNG 151
++ + + +G
Sbjct: 476 EVKYGLMHQDG 486
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 97 VEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D+ND +P F S YS +IPE +PVGT + V A+D D G NS++S+
Sbjct: 220 ITDENDCSPEFQHSIYSRDNIPETIPVGTSLLQVLATDCDSGSNSEISY 268
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 30 PKSGMYAPAFTFSIAKFIANP-----------TTRLYKNVGTLKRALRTEEHWLKVENTK 78
PK+G A T+SI + + N + +Y +G+L R E+ +L V +
Sbjct: 1117 PKAGTNA-VLTYSIIQNVQNEINLNLFSIDSVSGTIYTVLGSLDR--EKEDKYLVVVEAR 1173
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+ G L GT TI+V D ND+ P+F Y+ + E+ + T V VVS D D G
Sbjct: 1174 ----DGGGLTGTGTATILVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSVVDRDEGE 1229
Query: 139 NSKLSWNELEPNGLFSSDLRVEWVINR 165
N+ ++++ L+ + + + V NR
Sbjct: 1230 NAMVTFSILDGDNDRKFSIETDEVNNR 1256
>gi|395830697|ref|XP_003788455.1| PREDICTED: cadherin-19 [Otolemur garnettii]
Length = 772
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ V+ G PG L GT + I + D NDN P
Sbjct: 196 FSIEPTTGVIRISSKMDRELQ-DEYWVIVQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 253
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + ++A D D G N+++ ++
Sbjct: 254 IFKESLYRLTVSESAPTGTSIGRITAHDDDTGENAEMDYS 293
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDV 120
K+ L EE L + + G V + +I V D NDN P F Y ++PE
Sbjct: 101 KQKLDREEQSLYILRAQVIDITTGKAVEPESEFVIRVSDINDNEPKFLDEPYEATVPEMS 160
Query: 121 PVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
P GT+V V+A DAD G +++L ++ L+ FS
Sbjct: 161 PEGTLVIQVTARDADDPSSGNHARLLYSLLQGQPYFS 197
>gi|148678204|gb|EDL10151.1| mCG141284 [Mus musculus]
Length = 806
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L++ T G +P P GT I V D NDN P F S Y + +PED
Sbjct: 203 LDKALDHEEESELRLTLTALDGGSP-PRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPED 261
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
+P+G+ + +SA D D+G+ K+S++ L S D+R + IN
Sbjct: 262 MPIGSSITAISAKDLDMGIYGKISYSFLHA----SEDIRKTFEIN 302
>gi|3800736|gb|AAC68836.1| seven-pass transmembrane receptor precursor [Mus musculus]
Length = 3034
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 437 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLR 495
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 496 VQATDRDQGQNAAIHYSIVSGN 517
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 787 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 846
Query: 150 NGLFSSD 156
F D
Sbjct: 847 VPQFRID 853
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 990 SPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVVARIRANDPDEGPNAQI 1049
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1050 IYQIVEGNVPEVFQLDLLSGDLRA 1073
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T +L R + + H LKV H +P T T+ V D ND++P
Sbjct: 311 FLIDAATGAVTTARSLDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 366
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y I E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 367 VFEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 426
Query: 165 RSV 167
R+V
Sbjct: 427 RAV 429
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 544 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 600
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 601 HIQAVDADAGENARLQY 617
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 159 VEWVIN-RSVDQHT 171
V RS+D+ T
Sbjct: 317 TGAVTTARSLDRET 330
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 890 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 944
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H +P + + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 666 EHYSFGVEAVDH--GSPA-MSSSASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVL 722
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 723 TLRARDRD--ANSVITYQ 738
>gi|89994747|ref|NP_444375.2| protocadherin beta 20 precursor [Mus musculus]
gi|13876302|gb|AAK26071.1| protocadherin beta 20 [Mus musculus]
gi|21595186|gb|AAH31895.1| Protocadherin beta 20 [Mus musculus]
gi|26337851|dbj|BAC32611.1| unnamed protein product [Mus musculus]
gi|26454692|dbj|BAC32346.1| unnamed protein product [Mus musculus]
Length = 799
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L++ T G +P P GT I V D NDN P F S Y + +PED
Sbjct: 196 LDKALDHEEESELRLTLTALDGGSP-PRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
+P+G+ + +SA D D+G+ K+S++ L S D+R + IN
Sbjct: 255 MPIGSSITAISAKDLDMGIYGKISYSFLHA----SEDIRKTFEIN 295
>gi|115648153|ref|NP_034016.2| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Mus
musculus]
gi|341940538|sp|O35161.3|CELR1_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1; Flags:
Precursor
Length = 3034
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 437 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLR 495
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 496 VQATDRDQGQNAAIHYSIVSGN 517
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 787 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 846
Query: 150 NGLFSSD 156
F D
Sbjct: 847 VPQFRID 853
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 990 SPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVVARIRANDPDEGPNAQI 1049
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1050 MYQIVEGNVPEVFQLDLLSGDLRA 1073
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T +L R + + H LKV H +P T T+ V D ND++P
Sbjct: 311 FLIDAATGAVTTARSLDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 366
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y I E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 367 VFEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 426
Query: 165 RSV 167
R+V
Sbjct: 427 RAV 429
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 544 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 600
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 601 HIQAVDADAGENARLQY 617
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 159 VEWVIN-RSVDQHT 171
V RS+D+ T
Sbjct: 317 TGAVTTARSLDRET 330
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 890 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 944
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H +P + + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 666 EHYSFGVEAVDH--GSPA-MSSSASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVL 722
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 723 TLRARDRD--ANSVITYQ 738
>gi|14039481|gb|AAK53238.1|AF326313_1 protocadherin-betaT [Mus musculus]
Length = 844
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L++ T G +P P GT I V D NDN P F S Y + +PED
Sbjct: 241 LDKALDHEEESELRLTLTALDGGSP-PRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPED 299
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
+P+G+ + +SA D D+G+ K+S++ L S D+R + IN
Sbjct: 300 MPIGSSITAISAKDLDMGIYGKISYSFLHA----SEDIRKTFEIN 340
>gi|148672469|gb|EDL04416.1| cadherin EGF LAG seven-pass G-type receptor 1 [Mus musculus]
Length = 3010
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 437 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAVLR 495
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 496 VQATDRDQGQNAAIHYSIVSGN 517
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 787 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 846
Query: 150 NGLFSSD 156
F D
Sbjct: 847 VPQFRID 853
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 990 SPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVVARIRANDPDEGPNAQI 1049
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1050 MYQIVEGNVPEVFQLDLLSGDLRA 1073
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T +L R + + H LKV H +P T T+ V D ND++P
Sbjct: 311 FLIDAATGAVTTARSLDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 366
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y I E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 367 VFEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 426
Query: 165 RSV 167
R+V
Sbjct: 427 RAV 429
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 544 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 600
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 601 HIQAVDADAGENARLQY 617
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 159 VEWVIN-RSVDQHT 171
V RS+D+ T
Sbjct: 317 TGAVTTARSLDRET 330
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 890 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 944
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H +P + + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 666 EHYSFGVEAVDH--GSPA-MSSSASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVL 722
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 723 TLRARDRD--ANSVITYQ 738
>gi|291230328|ref|XP_002735121.1| PREDICTED: GA26057-like [Saccoglossus kowalevskii]
Length = 3460
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F+ +P T + TL R + H ++E T + PL GT N T+ V D NDN
Sbjct: 1998 RFVIDPITGEFSTQITLDRETK---HHYELEITAEDMAT-NPLTGTMNITVDVVDLNDNA 2053
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y++SIPED V V V A+DADLG N+ +++
Sbjct: 2054 PLFENLPYTVSIPEDFAVNGTVLTVVATDADLGTNAGVNY 2093
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL+GT II+ED+NDN+P+F VS+ + ED P+G + ++A D D G N ++ +N
Sbjct: 1722 PLIGTTTARIIIEDENDNSPLF-VSRSYTYVMEDEPLGYPIMHINALDPDFGDNGRVVYN 1780
Query: 146 ELEPN 150
++ N
Sbjct: 1781 IVDGN 1785
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
+V +++R R E++ V T SNP L II+ D NDN P F ++
Sbjct: 2111 DVTSVRRFDRESQAEYFFHVNATDESVSNP--LSSQAPIHIIITDINDNAPEFTQEPFTA 2168
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+I D+PV + V +S+SD+D GVN++++++ L + F
Sbjct: 2169 NISNDLPVDSSVLQISSSDSDEGVNAEVTYSLLGTSSYF 2207
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL----- 142
V T N I VED ND+ P F +Y ++ E VPVGT + V A+D D+G+N+ +
Sbjct: 2673 VATVN--IEVEDFNDHTPEFNEEEYEGTVSEGVPVGTTILTVHATDRDIGLNAMIRYDIS 2730
Query: 143 SWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
S NEL+ LF D + ++S H +
Sbjct: 2731 SGNELD---LFKIDQSTGVITSKSRLDHDTQ 2758
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Query: 92 NTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+TT++ V D ND+ P+F +S YS+S+PE+ T + VV A+DAD G N+++ ++
Sbjct: 1934 DTTLVLVNVLDMNDHAPVFAMSTYSISVPENGQT-TRLHVVVATDADTGTNAEIRYS 1989
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PTT V ++ AL E H + N + NP P G I + D NDN P
Sbjct: 1040 FSLHPTT----GVLSINSALDYESHVYVLLNIQAASGNP-PTHGRAQVNISIIDVNDNFP 1094
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVS-ASDADLGVNSKLSWNELEPN------GLFS-SDL 157
F + +S+ E + GT++ + A+D D G N K+ + ++ N GLFS + L
Sbjct: 1095 EFARASEVVSVSETITPGTILPFIPVATDRDSGDNGKVEYRLVDSNNMNNFDGLFSINKL 1154
Query: 158 RVEWVINRSVD 168
+ I+R+V+
Sbjct: 1155 TGQIQIHRTVE 1165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 35 YAPAFTFSI---AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTC 91
Y+ F I A+F P T +L R T V+ T G + +V
Sbjct: 809 YSMGHVFGISPPAEFSIRPETGWICATMSLDRDRGTTSFLFPVQATDGGGLHSVTMVN-- 866
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
I + D NDN PIF Y++ + ED VGT V V+A+D D G +++ N
Sbjct: 867 ---INILDVNDNKPIFYPHIYAVDLSEDSAVGTEVISVAATDRDAGAYGLITYQITSGNE 923
Query: 151 -----------GLFSSDLRVEWVINRSV 167
LFS +R++ +NR +
Sbjct: 924 NNIFTINSRSGKLFSRMIRLQLSLNRQL 951
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G+ + + D NDN P+F S+YS I E VG + V A+D D G N +S++
Sbjct: 430 GSTLLNVTITDANDNQPVFNQSRYSARIAETASVGRSILQVHATDIDEGSNGAVSYD 486
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 83 NPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
N P+ T II V D NDNNP Y +I E+ + V VSASD D G N +
Sbjct: 1286 NGDPVQSATATVIIHVTDVNDNNPRLLHESYHFTINENEIAYSYVDTVSASDRDQGTNGE 1345
Query: 142 LSWNELEPNGLFSSDLRVEWV-INRSVDQHTN 172
+ ++ ++P+ FS D + + N +D+ N
Sbjct: 1346 IVYS-IQPDDTFSIDEQTGMISTNMMLDREAN 1376
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ ++D N+N P F + Y + + E + VG + VSA+D DLG N+++++
Sbjct: 1194 VYIQDMNNNGPQFYPTSYEVDVAESLVVGERIVTVSATDGDLGNNARITY 1243
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + + L R ++ H L V H NP P + V+D+NDN+P
Sbjct: 1471 FTIDETNGMIRTRAVLDRESKSSYH-LTVMARDH--GNP-PKEAVAFVRVEVKDENDNSP 1526
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F S Y+ ++ E+ P T + V A+D D G N + +
Sbjct: 1527 KFMNSTYAFTVQENTPPSTNIGQVIAADRDAGNNGAVRY 1565
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-----------YSLSIPEDVPVGTVVQV 128
GS L +C + V D NDN+P F +++++PE P G +
Sbjct: 2441 DGSGSNALTSSCVVRVKVIDTNDNSPTFAEHNGVKIKEGKYYIFNVAVPELTPTGVSILT 2500
Query: 129 VSASDADLGVNSKLSWN-ELEPNGLFSSD 156
V+A+D D G+N+++ ++ ++ P F+ D
Sbjct: 2501 VNATDRDSGLNARIIYSIDVNPGIGFTID 2529
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T I + D NDN P F + E+V +G V SA DAD G N K+ +N
Sbjct: 1613 PLSTTTTVHIYITDLNDNAPEFANDPIIFPLRENVAIGHVAYTFSAVDADSGWNGKIRYN 1672
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF +T + V L R R + + L + + H P V I +ED NDN
Sbjct: 1788 GKFTIEHSTGILSLVDPLDREQR-DAYGLNISASDH---GVLPRVAFQYLIIYLEDVNDN 1843
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P+F + + + E+ + V+A+DAD+ VN ++ ++ PNG+
Sbjct: 1844 APVFTSDMFVMDVQENQDAFIYLGSVNATDADIDVNGQVLYS--IPNGI 1890
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G + II++D NDN PIF +YS + E+ T V V A+DAD+G N+ ++++
Sbjct: 2343 GFTHLKIILDDINDNPPIFIHERYSAQVWENELRNTYVTQVIATDADIGDNAVITYS 2399
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
G NP PL + + D NDN P F S Y+ S+ EDV V V+A+D D
Sbjct: 745 QDGGNP-PLSTNVTVIVTIRDVNDNEPSFDNSFYNASVFEDVSTDYCVLQVAATDPDADE 803
Query: 139 NSKLSWN 145
+++++
Sbjct: 804 FGRITYS 810
>gi|440904136|gb|ELR54689.1| hypothetical protein M91_19052, partial [Bos grunniens mutus]
Length = 604
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 66 RTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
R EE + L VE +G NPGPL T I+VED+NDN P F +Y + +PEDV V
Sbjct: 28 REEEASYQLLVE-ANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVN 86
Query: 124 TVVQVVSASDADLGVNSKLSWN 145
T V V A+D D G N+ + ++
Sbjct: 87 TPVLRVQATDRDQGQNAAIHYS 108
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 69 EHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
EH+ VE H P+ + + +I V D NDN+P VS Y++S+ ED PVGT +
Sbjct: 262 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDP---VSHYTVSVSEDRPVGTSIA 315
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSD 156
+SA+D D G N+++++ +P F D
Sbjct: 316 TISATDEDTGENARITYVLEDPVPQFRID 344
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGP---LVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
G ++ R + + V N + + G L + + V D NDN P+F + L
Sbjct: 454 GVIRTQRRLDRENVAVYNLRALAVDRGSSVSLSASVEIQVTVLDINDNPPVFEKDELELF 513
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDLR 158
+ E+ PVG+VV + ASD D G N+++ + +E N L S DLR
Sbjct: 514 VEENSPVGSVVARIRASDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLR 563
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 140 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 196
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 197 HIQAVDADAGENARLRY 213
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 381 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 435
>gi|426350411|ref|XP_004042768.1| PREDICTED: protocadherin beta-16 [Gorilla gorilla gorilla]
Length = 1012
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 779 LDKALDREEQAELSLTLTALDGGSPS-RSGTSTVRIVVLDVNDNAPQFAQALYETQAPEN 837
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G ++ VSA D D GVN+++S++ + S ++R + IN
Sbjct: 838 SPIGFLIVKVSAEDVDSGVNAEVSYSFFDA----SENIRTTFQIN 878
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P G VV V S D D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-GIVVAVFSIKDRDSGEN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
>gi|23271279|gb|AAH36062.1| Protocadherin beta 16 [Homo sapiens]
gi|157928918|gb|ABW03744.1| protocadherin beta 16 [synthetic construct]
Length = 776
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + I E+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIAENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
>gi|47227548|emb|CAG04696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2289
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GTC T+ V D NDN P+F S + +I ED P GT V +V++SDAD+G N +S++
Sbjct: 15 LSGTCMVTVFVSDVNDNAPVFSTSTFHTTITEDAPTGTDVLLVNSSDADVGNNGVISYSL 74
Query: 147 LEPNGLFSSDLRVEWVINRSV 167
+G FS + +I SV
Sbjct: 75 SGGHGQFSINPATGQIITSSV 95
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL G + I V ++N + P F SQ S +IPE + VGT ++ +SA D D +N +
Sbjct: 624 NP-PLSGLTSLRIAVTEENHHTPEFSQSQVSATIPESLAVGTAIRTLSARDKDKDMNGVI 682
Query: 143 SWNELEPN--GLFSSDLR 158
++N N GLFS + R
Sbjct: 683 TYNITSGNDRGLFSINSR 700
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+F NP T L R R L V G P L + ++ V D NDN
Sbjct: 79 GQFSINPATGQIITSSVLDREERANYQLLVVAT---DGGQPQGLSSSATVSVTVADINDN 135
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G++V V+ +D D G N++L ++
Sbjct: 136 PPRFHHHPYVTHIPASTAAGSLVFAVTVTDEDAGSNAQLHYS 177
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+ V D NDN P+F +Y + E+VP GT V ++A D D G N+ +++
Sbjct: 739 TVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTVVKMNAKDGDSGANAVMAY 789
>gi|14195605|ref|NP_066008.1| protocadherin beta-16 precursor [Homo sapiens]
gi|308153560|sp|Q9NRJ7.3|PCDBG_HUMAN RecName: Full=Protocadherin beta-16; Short=PCDH-beta-16; AltName:
Full=Protocadherin-3X; Flags: Precursor
gi|13876376|gb|AAK21988.1| protocadherin beta 8a [Homo sapiens]
gi|119582379|gb|EAW61975.1| protocadherin beta 16 [Homo sapiens]
gi|193786434|dbj|BAG51717.1| unnamed protein product [Homo sapiens]
Length = 776
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
>gi|8926619|gb|AAF81914.1|AF217757_1 protocadherin 3X [Homo sapiens]
gi|9965296|gb|AAG10030.1|AF282973_1 protocadherin-3x [Homo sapiens]
Length = 776
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
>gi|348544835|ref|XP_003459886.1| PREDICTED: cadherin-7-like [Oreochromis niloticus]
Length = 1193
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+ R LR +H+L V K G L GT T+++ D NDN P FP Y S+PE
Sbjct: 632 MDRELR--DHYLLVIQAKDMIGQMGGLSGTTTVTVMLTDVNDNPPRFPRKSYQFSVPEST 689
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
V VV + A DAD G N+++ + L+ +GL
Sbjct: 690 LVSAVVAKIKALDADAGPNAEMDYRILDGDGL 721
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---------LGV 138
VG + V D NDN P FPV +Y I E+ G +++ +SA D D +
Sbjct: 877 VGKAVVLVSVTDVNDNAPSFPV-EYQTFICENAQPGQIIETLSAVDLDEPKNGHHFLFSL 935
Query: 139 NSKLSWN 145
+K +WN
Sbjct: 936 AAKAAWN 942
>gi|351694840|gb|EHA97758.1| Cadherin-8 [Heterocephalus glaber]
Length = 799
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLSDVNDNPPKFAQSLYHFSVPEDVILGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|350581201|ref|XP_003480986.1| PREDICTED: protocadherin beta-10-like [Sus scrofa]
Length = 561
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R ++ L + T G +P P GT I+V D NDN P F + Y +PED
Sbjct: 196 LDRALDREKQPELSLTLTALDGGSP-PRSGTTAIRIVVLDVNDNAPRFSQAIYKTRVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+ + VSA D D+GVN+ +S++ + S D+R + I+
Sbjct: 255 SPVGSFIAKVSAGDEDVGVNADISYSFFDA----SEDIRTTFHID 295
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F Y+L + E+ V V A+DAD G N++L+++ L P+
Sbjct: 436 NLTVRVADVNDNAPAFSQPAYTLRVRENNSPALHVGTVRATDADAGANAQLTYSLLPPS 494
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS-- 154
V D ND++P+F + L I E+ GT Q+ A D+D G+N+ ++ + PN F
Sbjct: 123 VRDINDHSPVFRDKETVLKILENTAEGTTFQLERAQDSDGGLNAIQNYT-INPNSFFHIK 181
Query: 155 ---SDLRV---EWVINRSVDQH 170
SD + E V++R++D+
Sbjct: 182 ISYSDEDIIYPELVLDRALDRE 203
>gi|395504750|ref|XP_003756710.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 772
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ E + + T G +P P GT ++V D NDN PIFP +QY + IPE+
Sbjct: 192 TLDREVQPE---VTLTLTALDGGSP-PRSGTAQIRVLVVDINDNAPIFPQAQYEVQIPEN 247
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA+D D G N ++S++
Sbjct: 248 SPIGSLVVTVSATDLDTGNNGQVSYS 273
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPT +G +K + +K + ++ G L G C I V D NDN P
Sbjct: 285 FEVNPT------LGEIKMRRELDFEAIKSYEVDIEATDGGGLSGKCTVVIQVTDVNDNAP 338
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+S ++ IPE+ P TVV V D D G N ++
Sbjct: 339 ELVISSFTSPIPENSP-ETVVAVFKIRDQDSGENGQM 374
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
V+D ND++P+FP + L++PE+ P G++ + +A D D+G NS
Sbjct: 116 VQDINDHSPVFPNDEMLLNVPENSPPGSLFPLKTAQDLDIGSNS 159
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
CN T+++ D NDN P F S Y+ + E+ + V ASD D G N+K++++ P
Sbjct: 428 CNITVLISDINDNPPEFTQSAYTFYLQENNIPALHIGSVKASDRDSGTNAKVTYSFQSPK 487
Query: 151 G 151
Sbjct: 488 A 488
>gi|324499639|gb|ADY39850.1| Protocadherin Fat 2 [Ascaris suum]
Length = 2765
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
G+C T+ + D+NDN+P F S +S+ +P D PVG V +SA D D G N+ +S+
Sbjct: 661 FCGSCTVTVAISDENDNSPEFEQSSFSVDLPIDTPVGMEVAHLSAFDKDSGSNADISYTL 720
Query: 147 LEPNGLFSSD 156
P+G+FS D
Sbjct: 721 KTPSGIFSLD 730
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 38 AFTFSIAKFIANPTTRL------YKNVGTLKRALR--TEEHWLKVENTKHKGSNPGPLVG 89
A +FSI + NP+ L + +K R + H L +E H GS PL
Sbjct: 1329 AVSFSIIQGNGNPSFNLTSLPGNRAELSVIKEMDREASPRHLLTIEARDH-GS--PPLFS 1385
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELE 148
+ V D+ND+ P F Y +P D+PV + V A+D DL NSKL ++ +
Sbjct: 1386 VATIVVNVLDENDSPPFFIQDDYKQDVPLDLPVDFPLLTVRAADEDL--NSKLIYSIRSD 1443
Query: 149 PNGLFS 154
P+ +F+
Sbjct: 1444 PSKMFA 1449
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI N T L G + R T E+ V + H NP PL G + + + D NDN P
Sbjct: 1997 FIKNTTGELII-FGNIDRE-ETSEYVFDVVASDH--GNP-PLYGRTHVEVKILDVNDNYP 2051
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
F + +S+ E+ P GTVV + A+DAD ++ ++ L F+ D
Sbjct: 2052 EFVDAPIVVSLLENSPTGTVVATIHATDADDDRFGEVQYSLLNQEDTFAID 2102
>gi|410965846|ref|XP_003989451.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Felis catus]
Length = 2896
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G NPGPL T I+VED+NDN P F +Y + +PEDV V T V V ASD D G N
Sbjct: 285 QGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLRVQASDRDQGQN 344
Query: 140 SKLSWN 145
+ + ++
Sbjct: 345 AAIHYS 350
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 59 GTLKRALRTEEHWLKVENTK----HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
G ++ R + + V N + +GS P PL + + V D NDN P+F + L
Sbjct: 802 GVIRTQRRLDRENVAVYNLRALAVDRGS-PAPLSASVEVQVSVLDINDNPPVFERDELEL 860
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDLRV 159
+ E+ PVG+VV + A+D D G N+++ + +E N L S DLR
Sbjct: 861 FVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 912
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT V V+ A+D D G N+++++ +P
Sbjct: 626 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSVAVIGATDEDTGENARITYVLEDP 685
Query: 150 NGLFSSD 156
F D
Sbjct: 686 VPQFRID 692
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ +P T L R + + H LKV H +P T T+ V D ND++P
Sbjct: 149 FLIDPATGAVSTARALDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 204
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y + E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 205 VFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDPRSGVVRT 264
Query: 165 RSV 167
R+
Sbjct: 265 RAA 267
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 382 EYTLRIK--AQDGGRP-PLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 438
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 439 HIQAVDADAGENARLRY 455
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ EDVP T V VSA+D D G N +L +
Sbjct: 729 TTSLEILILDANDNAPRFLRDFYQGSVFEDVPPSTSVLQVSATDRDSGPNGRLLY 783
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P+F Y L + ED VG+ V + A D D NS +++
Sbjct: 529 ITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVLTLRARDRD--ANSVITYQ 577
>gi|168278929|dbj|BAG11344.1| protocadherin beta 16 precursor [synthetic construct]
Length = 776
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 294
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G+N++++++ L P
Sbjct: 436 NITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQ 494
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
>gi|10047319|dbj|BAB13447.1| KIAA1621 protein [Homo sapiens]
Length = 787
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 200 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 258
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V
Sbjct: 259 KVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEV 305
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G+N++++++ L P
Sbjct: 447 NITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQ 505
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 331 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 389
Query: 140 SK 141
K
Sbjct: 390 GK 391
>gi|328701666|ref|XP_003241675.1| PREDICTED: protein dachsous-like [Acyrthosiphon pisum]
Length = 3383
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++++ + L++ +++GS G CN T++V+D+NDN+P F S+Y + ED
Sbjct: 1783 TLDREVQSK-YQLQIAG-QNRGST---TAGHCNLTVLVDDENDNDPNFEQSKYEAVLLED 1837
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT V A DAD+GVN+K++++
Sbjct: 1838 VPPGTKVLTAKAHDADVGVNAKITYS 1863
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P L GT + + D NDN PIF S Y++ + ED VG+ V VSASD D GVNS ++
Sbjct: 527 PQQLTGTTTVHVTIHDLNDNEPIFDQSFYNVDVSEDRAVGSCVLKVSASDPDCGVNSMVN 586
Query: 144 WNELEPNGLFS 154
+ E +G FS
Sbjct: 587 FTLSESSGPFS 597
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R T + L +E + G P PL G + V D NDN P F S+Y ++PE
Sbjct: 183 GYLDRET-TAAYLLVIE--AYDGGLP-PLKGAMTVNVTVLDVNDNQPAFNQSRYYATVPE 238
Query: 119 DVPVGTVVQVVSASDADLGVNS----KLSWNELEPNGLFSSDLRVEWV-INRSVDQHTNK 173
+ V T + V A+D D G N +S + + G F+ D + + +NR +D T +
Sbjct: 239 NATVSTSILQVHATDVDDGDNGVVEYSISRRQSDKEGYFTVDRQTGVISVNRPLDYETRE 298
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
L EH L V+ S L I +ED NDN P FPVS+Y + E+ P+G
Sbjct: 2628 LDVSEHNLVVKAQDGAKSPDRQLATVKLLKIRLEDVNDNTPRFPVSEYLEFVGENEPIGA 2687
Query: 125 VVQVVSASDADLGVNSKL 142
+V A+DAD G+ +L
Sbjct: 2688 LVFTAKATDADRGLYGQL 2705
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+PGPL T + V D NDN+P F Y + E+ P GT VSA+D D G N+ +
Sbjct: 1055 SPGPLAATVVVVVTVADVNDNDPEFDQEHYEFHVEENRPAGTAFGAVSATDRDAGDNALI 1114
Query: 143 SWNELEPNGLFSSDL 157
++ + N F+ +L
Sbjct: 1115 RYSLIPSNSSFNINL 1129
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
II+ED+NDN+P F S +++PE+V G+ + A+D D G N ++ +
Sbjct: 855 IIIEDKNDNSPHFDSSSVRIAVPENVATGSPIYTAHATDPDSGANGQVHY 904
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 95 IIVEDQNDNNPIFPVS--QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+IV+D NDN P F V+ Q LS+PE+ PVG + ++ASD+D NS +S+
Sbjct: 2547 VIVDDANDNAPQFTVNEQQSLLSLPENTPVGHSIVRMTASDSDTPPNSDVSY 2598
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++V D NDN P+F +Y S+ E GT V V A+D D G N+ L++
Sbjct: 424 PLHASKTFHLLVTDVNDNRPVFAAPEYWASVSETAEPGTSVARVLATDEDEGDNAALTYK 483
Query: 146 ELEP 149
+P
Sbjct: 484 MRDP 487
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
G + I + DQNDN+P+F +Y+ ++ E G V V+A D D NS+LS++ ++
Sbjct: 2130 GYADVRIHLSDQNDNSPVFTQKEYTATVAEGNSKGAFVVRVAAVDLDDNENSRLSYHLVD 2189
Query: 149 PN 150
N
Sbjct: 2190 GN 2191
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 53 RLYKNVGTLKRA-LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
RL N G + A LR+ + L V G V ++ D + +F SQ
Sbjct: 706 RLDGNTGEIWAAQLRSGVYRLLVAARDGSGYEAAQ-VARVRIAVLAADLSKPYAVFVKSQ 764
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWNELEPNGLFSSD 156
YS ++PED PVGT V VS S G++ + + + E NG F+ D
Sbjct: 765 YSFTVPEDAPVGTAVGTVSVSPNQSGLDDSESLRYAIHSDEANGYFAID 813
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 58 VGTLK-RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
+G+L RT + V +++H S T++V D NDN+P+F Y+ ++
Sbjct: 2314 IGSLDYEQTRTYRLTVVVSDSEHTAS--------TELTVVVTDDNDNSPVFDRPYYTFTM 2365
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
E+V + +QV+ A D D G+N ++ +
Sbjct: 2366 IENVYGESSMQVL-AKDLDSGLNGQIKY 2392
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 92 NTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T++V +D NDN P+F Y+ ++ E + V + + V+A D D G N+++++
Sbjct: 956 NMTLVVDVQDINDNPPVFERPHYAATVLESLAVNSQIVQVTALDGDSGNNARVTYRISSG 1015
Query: 150 NGLFSSDLR--VEWVINRS-VDQHT 171
+G S D+ WV +S +D+ T
Sbjct: 1016 DGGGSLDVHPGTGWVYVKSPLDRET 1040
>gi|426246682|ref|XP_004017121.1| PREDICTED: cadherin-6 [Ovis aries]
Length = 790
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 313
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + K P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAINRKTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|351710309|gb|EHB13228.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Heterocephalus
glaber]
Length = 3064
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 250 EYQLLVE-ANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLR 308
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 309 VQATDRDQGQNAAIHYSIVSGN 330
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 14 HWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIA-NPTTRLYKNVGTLKRALRTEEHWL 72
HW+ +LE Y LR + PA IA F+ + TT L R + + H L
Sbjct: 99 HWATGWVLEPDYRGLRQQ----GPA----IAVFLTEDATTGAVSTARELDRETK-DTHVL 149
Query: 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSAS 132
KV H P T T+ V D ND++P+F S+Y + E++ VG V + A+
Sbjct: 150 KVSALDH--GTPRRSAAT-YLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRAT 206
Query: 133 DADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRSV 167
D D N+ + + LE G+F D R V R+V
Sbjct: 207 DGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAV 242
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 600 TVQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 659
Query: 150 NGLFSSD 156
F D
Sbjct: 660 VPQFRID 666
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P L + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 803 SPAALSASVEIQVTVLDINDNPPVFERDELELFVEENSPVGSVVAKIRANDPDEGPNAQI 862
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 863 MYQIVEGNMPEVFQLDLLSGDLRA 886
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 357 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHSVL 413
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G NS+L +
Sbjct: 414 HIQAVDADAGENSRLRY 430
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 479 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPLYELRLNEDAAVGSSVL 535
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 536 TLRARDRD--ANSVITYQ 551
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L
Sbjct: 703 TTSLEILILDANDNVPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRL 755
>gi|156379093|ref|XP_001631293.1| predicted protein [Nematostella vectensis]
gi|156218331|gb|EDO39230.1| predicted protein [Nematostella vectensis]
Length = 4354
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V DQND P+F Y++S+PED P+GT V + A+DAD+G N+K+++ ++ +P G
Sbjct: 2660 ITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGK 2719
Query: 153 FS---SDLRVEWVINRSVDQHT 171
FS S ++ E V+N +D T
Sbjct: 2720 FSIVTSPVKGELVVNGKLDFET 2741
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWL-KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F P T + +++ +L R + + + K E+ K L+ C TI VED NDN
Sbjct: 2295 FSIEPRTGVVRSLTSLDRENKDSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNR 2354
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSD 156
P F ++Y S+ P G+ + V A+DAD G N+K+ + L+ GLF D
Sbjct: 2355 PYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLD 2407
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP GT N + VED ND P+F SQY +I E+ P+ T V V A+D D G N
Sbjct: 225 GGNPS-HSGTANIRVNVEDANDQTPVFESSQYRETIAENTPIQTSVLRVRATDKDDGTNG 283
Query: 141 KLSWNELEP-NGLFSSD-----LRVEWVINRSV-DQHT 171
+ + P N F+ D +RV ++ + D+HT
Sbjct: 284 GIYYYMKNPVNSYFTIDAITGVIRVAKTLDYNARDKHT 321
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KFIA R+ N +L R + + LKV+ T+ P L T + I V + ND+
Sbjct: 1982 KFIAMGDGRILLN--SLLDFERDQTQYNLKVKATEQI---PDGLDSTVDVKIDVINANDH 2036
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
P F YS+ IPE VG +VQ V+A D D
Sbjct: 2037 FPYFDQQLYSVQIPESTAVGVLVQEVTAKDCDC 2069
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF +P + L K T R + ++V+ T NP L + + I V D ND+
Sbjct: 2933 KFSIDPLSGLIKTKVTFDREQTPNKFKVRVKATD--AGNPR-LSASVDGIIHVSDANDHK 2989
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
P F Y S+ E+ P G V V+A+D D+G N++ + ++ N
Sbjct: 2990 PKFTEKFYRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGN 3035
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 60 TLKRALRTEEH-----WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
T K L E H +++ E+ +P L G I V D+NDN+P+F + Y
Sbjct: 1380 TTKMTLDYETHKSHTLFIRAEDN----GSPKRLSGIAQVDIDVIDRNDNSPVFAAAFYRA 1435
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
I GT V V A+D D G N +++++ ++ N
Sbjct: 1436 KISLGAVKGTSVLQVHATDLDSGQNGQITYSIIQGN 1471
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
+ T + V D ND+ P F Y LS+P P G+ + V A D D+G N+++ +
Sbjct: 881 MFATAQVEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRYEL 940
Query: 147 L 147
L
Sbjct: 941 L 941
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ T + L EE +KV +N G + + D NDN P FP S Y +
Sbjct: 2837 DIRTGSKQLDREESPVKVFTVI---ANDGKHTAQAEIRVNLTDVNDNAPRFPASPYIGYV 2893
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
E+ P GT V + A D D G N+KLS+ + G
Sbjct: 2894 EENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAG 2931
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
D++DN P F Y +PE+ P GT V VV DAD G N
Sbjct: 581 DEDDNFPYFSQPIYIAQVPENQPSGTFVTVVVGRDADEGFN 621
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 57 NVGTL-KRALRTEEHWLKV-ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
N G + R L E H V + T +P G CN TI VED+NDN+P F + +Y
Sbjct: 1292 NTGAITARPLDREVHARYVLQITAQDRGSPTSQQGHCNITIRVEDENDNDPKFELQKYIA 1351
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ ED +GT V V A DAD+G+N+++ ++
Sbjct: 1352 TVDEDAQLGTTVLTVKAVDADIGINARIVYS 1382
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T + + V D NDN+PIFP Y I E++ G+V+ V+ASDAD G+N+ + ++
Sbjct: 546 LTATTHVIVTVLDANDNSPIFPKQLYEFEIEENMRRGSVIGQVTASDADTGINAVVRYSL 605
Query: 147 LEPNGLF 153
+ N F
Sbjct: 606 IPSNSSF 612
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 67 TEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVG 123
T+ H L V S+ G PL+ T N TI+VE D NDN PIF ++YS+ + E P
Sbjct: 410 TQRHMLIV-----TASDSGIPLLST-NLTIMVEVQDVNDNPPIFEKTEYSIKVIESTPSN 463
Query: 124 TVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
+ + V+A DAD G N++L++ + D R + S D+H
Sbjct: 464 SQIVQVTAVDADTGNNARLTYR------ILGDDQRQRSGKSTSSDEH 504
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 56 KNVGTL--KRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+N G L R+L E E+ +++ SN P I + D NDN P +P
Sbjct: 840 RNSGKLVVARSLDREQQSEYRMEIRALDTSASN-NPQSSAVTVKIEIADVNDNPPKWPSD 898
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
++ I ED PVG +V +A+D+D G N++L +N +P
Sbjct: 899 PINVYISEDSPVGAIVFNFTATDSDSGTNAELKYNLSKP 937
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 63 RALRTEEHWLKVE---NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R T +H K + N + +P P G I +ED NDN P F S +S+PE+
Sbjct: 294 RVASTLDHETKPQVLLNIQATSGDP-PAYGHTQVNIDIEDVNDNPPEFESSTVRISVPEN 352
Query: 120 VPVGTVVQVVSASDADLGVNS----KLSWNELEPNGLFSSDLR 158
V +G+ + +A D D G++ +LS N + LF+ D R
Sbjct: 353 VEIGSPLYAANAHDKDSGMSGVITYRLSNNGPSTSSLFAVDSR 395
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL-- 136
+KG N + TI VED NDN P F Y +SI E + + ++SA DADL
Sbjct: 2069 YKGMN---MTSAIRVTITVEDANDNAPEFQPGPYEVSISESAAIKYSIAMISAVDADLVN 2125
Query: 137 GVNSKLSWNELEPN--GLFSSDL 157
NS++ + + N G+FS DL
Sbjct: 2126 SPNSEVVYQIISGNDGGMFSIDL 2148
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G C+ + ++D+NDN+P F QYS S+ E G V V A DAD G N+ + ++
Sbjct: 1647 LYGYCSIKVELQDENDNSPRFTQQQYSASVWEGNNKGAFVIKVGAFDADQGSNAHILYHI 1706
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS ++ V++R +
Sbjct: 1707 VDGNHDNAFIIEPAFSGIVKTNIVLDREI 1735
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 97 VEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLF 153
V D ND+ P F P S Y L++PE+ + +V+ V+ASDAD G+N +++++ N F
Sbjct: 1229 VTDVNDHAPEFLPGSCYPLAVPENSDL-SVIHTVAASDADEGLNGEITYSISGGNIGNKF 1287
Query: 154 SSDLRVEWVINRSVDQH 170
S D+ + R +D+
Sbjct: 1288 SIDINTGAITARPLDRE 1304
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I + D+NDN P FPV +Y + E+ PVG + A+D D G+ ++++
Sbjct: 2190 INLTDENDNEPQFPVPEYLEFVGENEPVGISIFTARATDMDRGMYGNVNYS 2240
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP----VGTVVQVVSASDADL 136
++ G L T I + D NDN P F +Y++S+ E +P + T V VV A+D+D
Sbjct: 99 ATDRGGLSTTAMVKIQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVVVVATDSDS 158
Query: 137 GVNSKLSWNELEPN--GLFSSD 156
G +S+ + N G+F D
Sbjct: 159 GNFGTISYRIVAGNEAGIFRMD 180
>gi|301769067|ref|XP_002919952.1| PREDICTED: cadherin-6-like [Ailuropoda melanoleuca]
gi|281342394|gb|EFB17978.1| hypothetical protein PANDA_008625 [Ailuropoda melanoleuca]
Length = 790
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 313
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPI 106
+ V T+K+ L E+ KV K + SNP GP I+VED D P+
Sbjct: 326 EGVITVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDAATVRIMVEDV-DEPPV 382
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
F Y L I ED + T + V+A D D N
Sbjct: 383 FSKLAYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|410909484|ref|XP_003968220.1| PREDICTED: cadherin-20-like [Takifugu rubripes]
Length = 790
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T E++ V K G G L GT I + D NDN P+F Y +SIPE P+G+VV
Sbjct: 222 TRENYSVVIQAKDMGGQMGGLAGTTTVNITLTDINDNPPMFDQRLYQMSIPEAAPMGSVV 281
Query: 127 QVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+ A D D+G+N+++ ++ ++ +G + D+ +
Sbjct: 282 GRIWAKDRDIGINAEMRYSIIDGDGRDTFDVSTD 315
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GP + VED D P+F Y + +PED +GTVV+ VSA D D N+
Sbjct: 356 GPFKDVTIVHVSVEDV-DEPPLFDSPGYYIELPEDAEIGTVVKTVSARDPDSANNT 410
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + ++D NDN P F Y ++PE +GT V ++A+DAD G ++++
Sbjct: 132 PLEPESEFIVKIQDINDNEPRFLDGPYWATVPEMSQIGTSVIQLTATDADDPTYGNSARV 191
Query: 143 SWNELEPNGLFSSDLR 158
++ LE FS D +
Sbjct: 192 VYSILEGQPYFSVDAK 207
>gi|350594189|ref|XP_003359784.2| PREDICTED: cadherin-6-like [Sus scrofa]
Length = 790
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKILDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|167860146|ref|NP_989518.2| cadherin-7 precursor [Gallus gallus]
gi|17366584|sp|Q90763.1|CADH7_CHICK RecName: Full=Cadherin-7; Flags: Precursor
gi|868001|dbj|BAA07721.1| chicken cadherin-7 [Gallus gallus]
Length = 785
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GIIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +P+ +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPLASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 320
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + H P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQAHDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F YS+ + E VGT++ V+A D D
Sbjct: 356 GPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPD 405
>gi|410926835|ref|XP_003976874.1| PREDICTED: protocadherin alpha-8-like, partial [Takifugu rubripes]
Length = 641
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+R+L E EH L + T G NP P GT N T+IV D NDN+PIF YS IP
Sbjct: 197 LQRSLDREKLREHHLIL--TAVDGGNP-PRSGTLNVTVIVLDSNDNHPIFSQEVYSADIP 253
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+V GT V V A+D D G N ++ +
Sbjct: 254 ENVAAGTSVINVKATDLDEGANGEIEY 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
P+ C I V DQNDN P V+ S + ED GTV+ ++S +D D G+N K+
Sbjct: 330 PMSTDCTVIIKVLDQNDNTPQIEVTSLSNRVSEDSKSGTVISLISIADRDAGLNGKV 386
>gi|25989517|gb|AAM55476.1| cadherin-7 [Gallus gallus]
Length = 551
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL ++ +L V K G L GT + T+ + D NDN P FP Y
Sbjct: 209 GIIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++PE +P+ +VV + A+DAD+G N+++ + ++ +GL V SVD+ T +
Sbjct: 269 YNVPESLPLASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKDTQE 320
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + H P+ I ++D NDN P F Y+ +
Sbjct: 103 DIHATKRLDREEQAYYTLRAQAHDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGV 162
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V+A+DAD G ++++ ++ L+ FS
Sbjct: 163 PEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFS 203
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP IIVED D P+F YS+ + E VGT++ V+A D D
Sbjct: 356 GPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPD 405
>gi|449475308|ref|XP_004175477.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3-like
[Taeniopygia guttata]
Length = 821
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R E L++ T G +P P GT I V D NDN P+F +Y +S+ ED
Sbjct: 205 LRRALDRESEPSLRLLLTALDGGDP-PRTGTAQLWINVTDANDNPPVFAQDRYRVSLRED 263
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P G+ V +SASDAD G N+ +++
Sbjct: 264 TPPGSTVLNISASDADAGTNAHITY 288
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNN 104
PT L K +R T + L E+T+ + + G LV C + V D NDN
Sbjct: 294 PTKVLQKFTVDAQRGTITLQEELDFEDTRGYTLLVEARDGGGLVAHCKVELEVLDVNDNA 353
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
P V S +PED PVG VV ++ +D D G N ++
Sbjct: 354 PEITVLSLSNPLPEDAPVGAVVALLYVNDPDSGENGQV 391
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS---ASDADLGVNSKLSWNELEPNG 151
+++ED NDN P F + L I E G S A D D+G NS L ELE NG
Sbjct: 127 VVIEDVNDNTPRFLQDSFQLEINEFTSPGPGFARFSLGMAEDPDVGSNS-LQGYELETNG 185
Query: 152 LFSSDLR--------VEWVINRSVDQHT 171
F+ +++ E V+ R++D+ +
Sbjct: 186 YFAVEVKESQDGSKFAELVLRRALDRES 213
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P+F +YS + E+ G +V V A+DAD G N+++ + E
Sbjct: 451 VLDVNDNAPVFAEERYSARLSENNAAGALVLRVRATDADWGQNARVRYRLAE 502
>gi|359319304|ref|XP_536515.4| PREDICTED: cadherin-6 [Canis lupus familiaris]
Length = 930
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 313
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
>gi|332234753|ref|XP_003266568.1| PREDICTED: protocadherin gamma-A5 [Nomascus leucogenys]
Length = 813
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + ++V D NDN P+F S+YS+S+PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVMVLDANDNAPLFTSSEYSVSVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSTENHILLKVADVNDNPPNFPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G L+ + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALLASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGTVIALFSVHDDDSGENGEIACS 385
>gi|156368057|ref|XP_001627513.1| predicted protein [Nematostella vectensis]
gi|156214425|gb|EDO35413.1| predicted protein [Nematostella vectensis]
Length = 1781
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF + ++ GT R + +++ + V + H NP TC + V D NDN+
Sbjct: 62 KFAIDASSGRIYTTGTFDRETK-DDYSINVTASDH--GNPSK-SSTCVVLVTVADNNDNS 117
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
P FP Y I ED VG + VSASDAD+G N++L+++ + P
Sbjct: 118 PKFPALHYVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSP 162
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 17/96 (17%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--------- 144
TI V+D NDN P+F ++++SI E+V GT V V+A+D D G N+K+S+
Sbjct: 2 TITVQDVNDNAPVFTSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSHGN 61
Query: 145 --------NELEPNGLFSSDLRVEWVINRSVDQHTN 172
+ G F + + ++ IN + H N
Sbjct: 62 KFAIDASSGRIYTTGTFDRETKDDYSINVTASDHGN 97
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ N T L R +++ + L+V+ T G +P L + + V DQND+ P
Sbjct: 375 FVINENTGTIGITAKLDRETKSK-YTLRVQATD--GGSPA-LSSEADVIVNVLDQNDHAP 430
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F + ++ + ED GT V VSA D D+G N+ ++++
Sbjct: 431 VFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNADVTYS 470
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEP 149
N T+++ D NDN P+F +S+Y+ + E V +V VV A D D+G + +++ +
Sbjct: 313 NVTVVLRDVNDNQPVFTMSEYAAEVSEGVVESNIVTVV-AEDRDIGSDGSVTYCITQGRE 371
Query: 150 NGLF 153
GLF
Sbjct: 372 GGLF 375
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 39 FTFSI-----AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNT 93
T+SI A F NP T T+ + L E + T P PL +
Sbjct: 155 LTYSIVSPEKATFSMNPVTGEI----TVGQRLDREGANYSIRVTATDLGTP-PLSASMEI 209
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+IV+D ND+ P+F ++ I E+ GT + + A D D GVN+++ +
Sbjct: 210 TVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRY 260
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
V ++N + P+F + Y S ED+ VG+ + V+A+D D G N ++S++ + N
Sbjct: 624 VTERNLHPPVFSKAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGN 677
>gi|410949738|ref|XP_003981575.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Felis catus]
Length = 791
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 205 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 264
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 265 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 314
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 148 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPI 106
+ V T+K+ L E+ KV K + SNP GP I+VED D P+
Sbjct: 327 EGVITVKKVLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDAATVRIMVEDV-DEPPV 383
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
F Y L I ED + T + V+A D D N
Sbjct: 384 FSKLAYILQIREDAQINTTIGSVTAQDPDAARN 416
>gi|334325928|ref|XP_001372408.2| PREDICTED: cadherin-19 [Monodelphis domestica]
Length = 799
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R E+ +L V PG L GT TI + D NDN P
Sbjct: 225 FSVEPTTGVIRISSQMDR--EAEDQYLVVVQATDMLGLPGGLSGTTTVTINLSDVNDNRP 282
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF Y +++ E PVGT + + A D+D+G N+K++++
Sbjct: 283 IFQFGLYHMNVSESAPVGTSIGAILAEDSDIGDNAKMNYS 322
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ +K+ R E+ + K+ P+ I V D NDN P F Y SI
Sbjct: 126 DITAIKKLDREEKSYYKLRGQVIDVVTGKPVEPESEFVIKVLDINDNQPEFLEGPYETSI 185
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD-----LRVEWVINRSVD 168
PE P GT V V+A+D D G N++L ++ L+ FS + +R+ ++R +
Sbjct: 186 PEMSPEGTSVIQVTATDNDDPSHGNNARLIYSILQGRPYFSVEPTTGVIRISSQMDREAE 245
Query: 169 QH 170
Sbjct: 246 DQ 247
>gi|395504764|ref|XP_003756717.1| PREDICTED: protocadherin gamma-A2-like [Sarcophilus harrisii]
Length = 941
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++AL EE H+L + T G +P GT + V D NDN P+F +Y++++P
Sbjct: 298 LEKALDREEEAVHYLML--TAWDGGDPV-RTGTARIRVNVLDANDNTPVFTQPEYTVNVP 354
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
E++P GTV+ V+A+DAD G+NS++ + E++ G S ++
Sbjct: 355 ENIPQGTVLLTVNATDADEGINSQVRYFEVKIPGKISQIFQI 396
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + L I E GT + SA D D+GVNS L EL PN FS
Sbjct: 123 ITDVNDNTPQFLAEELELKISEFTAPGTHYLLESAYDQDVGVNS-LQGYELSPNHHFS-- 179
Query: 157 LRVE 160
LRV+
Sbjct: 180 LRVQ 183
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + L I E GT + SA D D+GVNS L EL PN FS
Sbjct: 225 ITDVNDNTPQFLAEELELKISEFTAPGTHYLLESAYDQDVGVNS-LQGYELSPNHHFS-- 281
Query: 157 LRVE 160
LRV+
Sbjct: 282 LRVQ 285
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H ++VE G L + V D NDN P ++ + SIPE+ P GTV+
Sbjct: 415 EFHEMEVEAQDALG-----LRSRAKIHVTVLDVNDNTPEVAITSVTNSIPENAPPGTVIA 469
Query: 128 VVSASDADLGVNSKLSWNELEPNGL-FSSDLRVE----WVINRSVDQ 169
+ D D G N ++ + P L F + +V+ VI+R++D+
Sbjct: 470 LFHVHDRDSGENGQVLCS--IPGDLPFKLEKKVDSYYSLVIDRALDR 514
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPE 118
+ RAL E+ + V N + + G + +T I+ V D NDN P F S YS I E
Sbjct: 508 IDRALDREQ--VSVYNITVRVEDFGSPALSTDTHILLQVADINDNPPTFSQSTYSAYIQE 565
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ P G + ++A D D N+ ++++ +E N
Sbjct: 566 NNPRGASIYSLTAHDPDSEQNALVTYSIIESN 597
>gi|195325632|gb|ACF95724.1| cadherin-6 [Mustela putorius furo]
Length = 607
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 148 GQPYFSVESEAGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 207
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 208 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 257
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 91 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 150
Query: 152 LFS 154
FS
Sbjct: 151 YFS 153
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFP 108
V T+K+ L E+ KV K + SNP GP I+VED D P+F
Sbjct: 274 VITVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDAATVRIMVEDV-DEPPVFS 330
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 331 KLAYILQIREDAQINTTIGSVTAQDPDAARN 361
>gi|326917119|ref|XP_003204849.1| PREDICTED: cadherin-10-like [Meleagris gallopavo]
Length = 789
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP S L IPE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESSPVGTAIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V A+DAD+G N+++ + ++ +G
Sbjct: 291 VKATDADIGKNAEVEYRIVDGDG 313
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D P+F S Y + ED+ +GT++ V A D D
Sbjct: 363 GPFKDTTIVKISVEDV-DEPPVFSRSSYLFEVHEDIELGTIIGTVMARDPD 412
>gi|156311353|ref|XP_001617773.1| hypothetical protein NEMVEDRAFT_v1g48709 [Nematostella vectensis]
gi|156195716|gb|EDO25673.1| predicted protein [Nematostella vectensis]
Length = 347
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R+Y GT R + +++ + V + H NP TC + V D NDN+P FP Y
Sbjct: 4 RIYT-TGTFDRETK-DDYSINVTASDH--GNPSK-SSTCVVLVTVADNNDNSPKFPALHY 58
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
I ED VG + VSASDAD+G N++L+++ + P
Sbjct: 59 VFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSP 95
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus
floridanus]
Length = 3165
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
+I +F NP T L R L + L V T G P PL T + I V D N
Sbjct: 851 TINEFTINPQTGAITTTKALDREL-IPSYLLTV--TARDGGIP-PLSDTTDVEISVTDVN 906
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV VGT V ++A+DAD +N ++ + E + +G F+ D
Sbjct: 907 DNAPVFEAPQYLGSIPEDVLVGTSVVRIAATDADTDLNGRVRYALEDDGDGAFAID 962
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + V D N+ +P+F + YS+S+ ED PVG V VVSA+D+D+G N+
Sbjct: 778 ASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVLVVSATDSDVGKNA 837
Query: 141 KLSWNELEPNG 151
+++++ NG
Sbjct: 838 QITYSLATDNG 848
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P GT + V D ND+ P F S+Y ++ E VPVG+ V V A+D D G N+++ +
Sbjct: 345 PRTGTTTLQVNVLDANDHTPSFEWSEYDATVREGVPVGSTVVTVKATDQDTGRNAEVEY 403
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 NTT---IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
NTT ++V+D NDN P F S + S+ E+VP+G V V A DAD N+ + +N
Sbjct: 572 NTTQLLVMVKDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDADESNNALIKYN 628
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + + V D NDN+P F Y I ED P GT V V+A+D D
Sbjct: 680 PKSASATVILTVTDVNDNDPYFEPKNYEAVISEDDPPGTPVASVTATDPD 729
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGT--VVQVVSASDADLGVNSKLSW 144
N T++V D NDN P F YS S+ ED+ + VV + A+DAD G N+ + +
Sbjct: 466 NATLMVRVLDDNDNYPQFTERTYSASVSEDLDYTSNPVVARIRATDADAGANAAVRY 522
>gi|297709181|ref|XP_002831320.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Pongo abelii]
Length = 1157
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 371 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 429
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 430 VQATDRDQGQNAAIHYSILSGN 451
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I + D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 721 TAHVLINITDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 780
Query: 150 NGLFSSD 156
F D
Sbjct: 781 VPQFRID 787
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 924 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 983
Query: 143 SWNELEPN-------GLFSSDLR 158
+ +E + L + DLR
Sbjct: 984 MYQIVEGDMRHFFQLDLLNGDLR 1006
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 266 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 322
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 323 TIRASDRDSPINANLRYRVL 342
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G N
Sbjct: 488 GGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSGEN 546
Query: 140 SKLSW 144
++L +
Sbjct: 547 ARLHY 551
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 27/53 (50%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
T I++ D NDN P F Y SI ED P T + VSA D D G N +L
Sbjct: 824 TTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSAMDRDSGPNGRL 876
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
D NDN+P+F Y L + ED VG+ V + A D D
Sbjct: 628 DVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRD 664
>gi|407262358|ref|XP_003946068.1| PREDICTED: protocadherin gamma-B5-like [Mus musculus]
Length = 815
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++++ ++ T G +P PL GT I V D NDN P+F Y
Sbjct: 189 RKYPELVLEKTLDREQQNYYRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNQEVY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+VP GT V V+A+D D GVNS++S++
Sbjct: 248 KVRLPENVPPGTTVLRVTATDKDEGVNSEISYS 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ V D NDN P+F + Y + I E+ P G + VSASD DLG N +S+
Sbjct: 427 PLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIAQVSASDLDLGSNGHVSYS 486
Query: 145 ---NELEPNGLFS 154
++LEP L+S
Sbjct: 487 IIASDLEPKSLWS 499
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G LV C I ++D+NDN P V +I E+ GT++ ++ D D G N +++
Sbjct: 321 GGLVAQCTVEINIQDENDNRPEITVDSLLETILENAETGTLIALIKIHDGDSGENGEVNC 380
Query: 145 ---NELEPNGLFSSDLRVEWVINRSVDQH 170
E+ + SS + V +R++D+
Sbjct: 381 RLDGEVPFKIISSSKNSYKLVTDRALDRE 409
>gi|18087739|ref|NP_291055.1| protocadherin gamma-B5 precursor [Mus musculus]
gi|13876352|gb|AAK26096.1| protocadherin gamma B5 [Mus musculus]
gi|182888239|gb|AAI60199.1| Protocadherin gamma subfamily B, 5 [synthetic construct]
Length = 926
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++++ ++ T G +P PL GT I V D NDN P+F Y
Sbjct: 189 RKYPELVLEKTLDREQQNYYRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNQEVY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+VP GT V V+A+D D GVNS++S++
Sbjct: 248 KVRLPENVPPGTTVLRVTATDKDEGVNSEISYS 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ V D NDN P+F + Y + I E+ P G + VSASD DLG N +S+
Sbjct: 427 PLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIAQVSASDPDLGSNGHVSYS 486
Query: 145 ---NELEPNGLFS 154
++LEP L+S
Sbjct: 487 IIASDLEPKSLWS 499
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G LV C I ++D+NDN P V IPE+ P GT++ ++ D D G N +++
Sbjct: 321 GGLVAQCTVEINIQDENDNRPEITVRSLLEMIPENAPPGTLIALIKIHDGDSGENGEVNC 380
Query: 145 ---NELEPNGLFSSDLRVEWVINRSVDQH 170
+E+ + SS + V +R++D+
Sbjct: 381 RLDDEVPFKIISSSKNSYKLVTDRALDRE 409
>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
Length = 801
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
PVG +V VSA+DAD GVN ++S++ + + +V+++
Sbjct: 256 SPVGFLVVKVSATDADTGVNGEISYSLFQASDEIGKTFKVDFL 298
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D N
Sbjct: 321 EARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSEEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
>gi|351705182|gb|EHB08101.1| Protocadherin beta-16 [Heterocephalus glaber]
Length = 753
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I+V D NDN+P F Y + +PE+
Sbjct: 196 LDRALDREEQPEIRLTLTALDGGSP-PSTGTSQVLILVLDINDNDPEFGQGLYKVQVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
PVG+ V VSASD D G + +LS++ +P+
Sbjct: 255 SPVGSHVITVSASDLDTGTHGELSYSFFQPS 285
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ V D NDN P F + Y+L +PE+ + +SA+D D G N++++++ L P
Sbjct: 436 NITVQVSDVNDNAPTFTQTSYTLWVPENNSPALHIGTISATDRDSGTNAQVTYSLLLP 493
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L G C + V D NDN P +S IPE+
Sbjct: 303 LKKLLDFEE--IEYYHMEVEASDGGGLSGKCTVALEVVDVNDNAPELTLSLLISDIPENS 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV + SD D G N K+
Sbjct: 361 P-ETVVAIFGISDPDSGDNGKM 381
>gi|148678177|gb|EDL10124.1| mCG133388, isoform CRA_g [Mus musculus]
Length = 926
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++++ ++ T G +P PL GT I V D NDN P+F Y
Sbjct: 189 RKYPELVLEKTLDREQQNYYRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNQEVY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+VP GT V V+A+D D GVNS++S++
Sbjct: 248 KVRLPENVPPGTTVLRVTATDKDEGVNSEISYS 280
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ V D NDN P+F + Y + I E+ P G + VSASD DLG N +S+
Sbjct: 427 PLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIAQVSASDLDLGSNGHVSYS 486
Query: 145 ---NELEPNGLFS 154
++LEP L+S
Sbjct: 487 IIASDLEPKSLWS 499
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G LV C I ++D+NDN P V +I E+ GT++ ++ D D G N +++
Sbjct: 321 GGLVAQCTVEINIQDENDNRPEITVDSLLETILENAETGTLIALIKIHDGDSGENGEVNC 380
Query: 145 ---NELEPNGLFSSDLRVEWVINRSVDQH 170
E+ + SS + V +R++D+
Sbjct: 381 RLDGEVPFKIISSSKNSYKLVTDRALDRE 409
>gi|355677298|gb|AER95951.1| cadherin 6, type 2, K-cadherin [Mustela putorius furo]
Length = 512
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D NDN P FP S Y
Sbjct: 27 GIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQ 86
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 87 FKTPESSPPGTPIGRIKASDADMGENAEIEYSITEGEGL 125
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPI 106
+ V T+K+ L E+ KV K + SNP GP I+VED D P+
Sbjct: 138 EGVITVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDAATVRIMVEDV-DEPPV 194
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
F Y L I ED + T + V+A D D N
Sbjct: 195 FSKLAYILQIREDAQINTTIGSVTAQDPDAARN 227
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 63 RALRTEEHWLKV-ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
R L E H V + T +P G CN TI VED+NDN+P F + +Y +I ED
Sbjct: 1270 RPLDREVHARYVLQITAQDRGSPVSHQGHCNITIRVEDENDNDPKFELQKYIATIDEDAQ 1329
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
+GT V V A DAD+G+N+++ ++
Sbjct: 1330 IGTTVLTVKAIDADVGINARIVYS 1353
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T + + + D NDN+PIF S Y I E++ G ++ VSASD+D G+N+ + ++
Sbjct: 510 LTATAHVIVTILDANDNSPIFAKSLYEFEIEENMRRGAMIGTVSASDSDAGINAVVRYSL 569
Query: 147 LEPNGLF 153
+ N F
Sbjct: 570 IPSNTSF 576
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSL 114
TL R L E H L V S+ G + N TI+VE D NDN PIF ++Y++
Sbjct: 362 TLARPLDYESMQRHTLVV-----TASDSGTPSLSTNLTILVEVQDVNDNAPIFEKNEYAI 416
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
S+ E P + + VSA+DAD G N++L++ L
Sbjct: 417 SVIESTPSNSQILQVSATDADTGNNARLTYKIL 449
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G + T+ + D+NDN P F QY+ S+ E GT V V A D+D G N+++ ++
Sbjct: 1618 LYGYTSITVELRDENDNAPRFTQQQYAASVWEGNSKGTFVIKVGAFDSDQGANARILYHI 1677
Query: 147 LEPNG--------LFSSDLRVEWVINRSV 167
++ N FS ++ V++R +
Sbjct: 1678 VDGNHDNAFIIEPAFSGIVKTNIVLDREI 1706
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 56 KNVGTL--KRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+N G L R L E E+ +++ SN P I + D NDN P +P
Sbjct: 804 RNSGKLVVARQLDREQQSEYRMEIRALDTSASN-NPQSSAVTVKIEIADVNDNPPKWPSD 862
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
++ + ED PVG +V + D D G N+++ +N +P L
Sbjct: 863 PINVYVSEDTPVGAIVYNFTVQDNDTGTNAEIKYNLSKPAHL 904
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P G I +ED NDN P F + +S+PE+V +G+ + +A D D G++ +++
Sbjct: 277 PAYGHTQVNIDIEDVNDNPPEFESNTVRISVPENVEIGSPLYEANAQDKDSGMSGVITY 335
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
TI + D+NDN P FPV +Y + E+ P+G + A+D D G
Sbjct: 2169 TIALSDENDNEPQFPVPEYLEFVGENEPIGISIFTARATDMDRG 2212
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T+H L + VED NDN P F Y +I E P+ + +SA DADL
Sbjct: 2044 TRHISRPDASLSTIIRVIVTVEDANDNAPEFQPGSYEATIGELAPIKHSIAKLSALDADL 2103
Query: 137 --GVNSKLSWNELEPN--GLFSSDL 157
+S++ + + N G+FS DL
Sbjct: 2104 SGSPSSEVIYQIISGNDSGMFSIDL 2128
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP----VGTVVQVVSASDADL 136
++ G L T I + D NDN P F +Y++S+ E +P + T V VV A+D+D
Sbjct: 57 ATDRGGLSTTAMVKIQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVVVVATDSDS 116
Query: 137 GVNSKLSWNELEPN--GLFSSD-LRVEWVINR 165
G +S+ + N G+F D L E + R
Sbjct: 117 GSFGTISYRIVAGNEAGIFRMDRLTGEIFVTR 148
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL--SWNELEPNGL 152
+I+ D NDN P+F + I V G + +SA+D+D G N ++ S NE NG
Sbjct: 1408 VIIADVNDNKPVFDKYPFREQIGALVQPGQTLLHISATDSDQGSNGEIVYSLNENASNGK 1467
Query: 153 F 153
F
Sbjct: 1468 F 1468
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ V GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2325 ETKEHFVLVITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFGSKMYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V +V+ASDAD N+ +S++ + N F+
Sbjct: 2383 VLLVNASDADASTNAVISYSIIGGNSQFT 2411
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 46 FIANPTTRLYKNVGTLKRAL--RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F NP T ++ L R L T+++++ + G T + D NDN
Sbjct: 1889 FFLNPITGVFN----LTRILDYETQQYYILTVRAEDGGGQ----FTTIRVYFNILDVNDN 1940
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
PIF ++ YS S+ E++P+G+ V V + +DAD G+NS+L+++ + S D ++ I
Sbjct: 1941 PPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYS------IASGDSLAQFAI 1994
Query: 164 NR 165
++
Sbjct: 1995 DK 1996
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQXGVPEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--GTVVQV 128
+L +GS P T +I++ D ND PIF +S YS+++PE++ T++QV
Sbjct: 2225 YLLTVQAADRGSTP--RTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLETLPRTILQV 2282
Query: 129 VSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
+ A D D G NSKLS+ NE + L +S +LRV ++R +H
Sbjct: 2283 I-ARDDDQGSNSKLSYVLLGGNEDQAFTLSASGELRVTQSLDRETKEH 2329
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P+GT V V+A D D +N +LS+
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSY 1457
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V V+A D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVNAIDKDFGPNGEVRYS 1138
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPAAEVRARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + N L
Sbjct: 474 VFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIISGNKL 520
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++V D NDNNP+F + Y + I ED GT + V A+D D G N ++ +
Sbjct: 2133 PLSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLTGTDILQVFAADGDEGTNGQVRYG 2192
Query: 146 ELEPN 150
++ N
Sbjct: 2193 IVDGN 2197
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
G C+ TI V D NDN+P+F +Y ++ E+ P GT V ++A+D D G N+ ++++
Sbjct: 3178 GYCSVTINVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIHLNATDVDSGTNAVIAYS 3234
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P V N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG+N
Sbjct: 665 GSPPQSSVTHINVSLL--DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGLNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVRYS 727
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L K KG NP PL I V ++N + P F S S +IPE +GT+V+
Sbjct: 3055 QNFLITVTAKDKG-NP-PLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGTIVRT 3112
Query: 129 VSASDADLGVNSKLSWN 145
VSA D D +N + ++
Sbjct: 3113 VSARDRDAAMNGLVRYS 3129
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV ASD D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQASDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPLG 2094
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDI 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQ 127
H++ + KGS P T II + D+NDN P F SQ +S +PE+ P+G +V
Sbjct: 2740 HYMLTIKSSDKGS---PSQSTSVKVIINILDENDNAPRF--SQIFSAHVPENSPLGYIVT 2794
Query: 128 VVSASDADLGVNS 140
V+ SD D+G N+
Sbjct: 2795 RVTTSDEDIGANA 2807
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIP 117
G L R L +E V N + P V + + D ND P+F + Y++S+
Sbjct: 538 GGLDRELASE----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVV 593
Query: 118 EDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 594 ENSPAGTELLVLGATDGDLGDNGTVRFSLQETE 626
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ YS+ I E
Sbjct: 3361 GLLDRE-KEERISLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFSLNIYSVQISE 3417
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3418 GVPIGTHVTFVSAFDSD 3434
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V V A+D D G N ++ +
Sbjct: 2857 STDVTIFVTDINDNAPRFSRPSYYLDCPELAEIGSKVTQVYATDPDEGSNGQVFYFIKSQ 2916
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2917 SEYFRINATTGEIFNKQVLKYQN 2939
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 983 TVYVYDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTISEGN 1039
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L T T IV D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2956 TSSDRGNPALLSETTVTVNIV-DSNDNAPQFLSDKYFTPVTKNVKVGTKLIKVTAVDDKD 3014
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS++ + N G F D W+
Sbjct: 3015 FGLNSEVQYFISNENYLGKFKLDSDTGWI 3043
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L+G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LIGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASSMDLNSNISYLITTGDQKGMF 839
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 840 AINQVTGQLTTASVIDR 856
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
>gi|77736223|ref|NP_001029812.1| cadherin-6 precursor [Bos taurus]
gi|122140080|sp|Q3SWX5.1|CADH6_BOVIN RecName: Full=Cadherin-6; Flags: Precursor
gi|74356303|gb|AAI04619.1| Cadherin 6, type 2, K-cadherin (fetal kidney) [Bos taurus]
gi|296475724|tpg|DAA17839.1| TPA: cadherin-6 precursor [Bos taurus]
gi|440912592|gb|ELR62149.1| Cadherin-6 [Bos grunniens mutus]
Length = 790
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITEGEGL 313
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + K P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAINRKTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|301773360|ref|XP_002922100.1| PREDICTED: cadherin-19-like [Ailuropoda melanoleuca]
gi|281345250|gb|EFB20834.1| hypothetical protein PANDA_011042 [Ailuropoda melanoleuca]
Length = 771
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSTEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIGL-PGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPAGTSIGKIMAYDNDIGENAEMDYS 294
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFSSD 156
FS++
Sbjct: 196 YFSTE 200
>gi|197098194|ref|NP_001125246.1| cadherin-6 [Pongo abelii]
gi|55727434|emb|CAH90472.1| hypothetical protein [Pongo abelii]
Length = 790
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P+GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFRTPESSPLGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF YS ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYSATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + NP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEAPNPHVEQRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP PL T N + + D NDN P+FP + Y+ ++ ED VGT V VSA DADLG+N
Sbjct: 826 GGNP-PLSDTTNVELEIADVNDNTPVFPTAGYTSTVSEDALVGTSVAHVSALDADLGLNG 884
Query: 141 KLSWNEL 147
++ + L
Sbjct: 885 QIRYTFL 891
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S A F +P + + L R E H+L+V G+ P T + V D+N
Sbjct: 262 SQAMFSIDPLSGVVTTTTVLDREF-IEVHYLRV--VAVDGATQPPSTATSTLQVNVLDEN 318
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP---NGLFSSDLR 158
D+ P F + Y SI E VP G V V A+D D G N+ + ++ L P NG F D +
Sbjct: 319 DHAPTFEQATYEASIRESVPTGFTVLTVRATDQDTGSNANVDYSILNPDGTNGAFGIDSK 378
Query: 159 VEWVINRS 166
+ RS
Sbjct: 379 SGIITTRS 386
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D N + P F + Y+ SIPEDVPVGT V VV A D D+G N+ +++
Sbjct: 738 VSDANTHRPTFERTPYTASIPEDVPVGTTVLVVEARDGDVGRNALVTY 785
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 92 NTT---IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NTT + V D NDN+P F S + ++PE+VPVG + V A DAD G N+++S+
Sbjct: 521 NTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVGHSIVRVQAYDADDGANAEISY 576
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
ED ND+ P F + L +PE+ PVG+V V A D D G N+ + +
Sbjct: 948 EDVNDSPPRFSADRIRLFVPENSPVGSVAGEVQAHDPDEGPNAVVQY 994
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
T + + V+D NDN+P+F Y ++ E P GT V V+ASD D
Sbjct: 627 ATASILLRVQDVNDNDPVFEPRTYEATVSEADPPGTPVVSVTASDRD 673
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 80 KGSNPGPLV----GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV--VSASD 133
+ ++ GP+ + I V D+NDN P F YS+ + EDV +V + A+D
Sbjct: 401 QATDSGPVTDRKSASATVQITVLDENDNYPQFSERSYSVKVSEDVNWLNHPEVARIRATD 460
Query: 134 ADLGVNSKLSWNELEPN--GLFSSD 156
+D G N+ L ++ + N G F+ D
Sbjct: 461 SDQGANAALRYSLIGGNTQGHFAMD 485
>gi|395504780|ref|XP_003756725.1| PREDICTED: protocadherin gamma-A10-like [Sarcophilus harrisii]
Length = 821
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL EE H L + T G +P GT + V D NDN P+F S YS+SIP
Sbjct: 196 LERALDREEKPVHHLIL--TAADGGDPAH-SGTVQVLVTVLDANDNAPVFTQSVYSVSIP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VP GT++ V+A+D D GVN +++++
Sbjct: 253 ENVPKGTLLLAVNATDPDEGVNGEVTYS 280
>gi|392341624|ref|XP_001078424.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
gi|392349660|ref|XP_001070474.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
Length = 3075
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 437 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLR 495
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 496 VQATDRDQGQNAAIHYSIVSGN 517
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 990 NPNPLSASVEVQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRANDPDEGPNAQI 1049
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1050 MYQIVEGNVPEVFQLDLLSGDLRA 1073
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 787 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 846
Query: 150 NGLFSSD 156
F D
Sbjct: 847 VPQFRID 853
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + TT L R + + H LKV H +P T T+ V D ND++P
Sbjct: 311 FLIDATTGAVTTARALDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 366
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y I E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 367 VFEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 426
Query: 165 RSV 167
R+V
Sbjct: 427 RAV 429
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 544 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 600
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 601 HIQAVDADAGENARLQY 617
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 666 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVL 722
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 723 TLRARDRD--ANSVITYQ 738
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAT 316
Query: 159 VEWVIN-RSVDQHT 171
V R++D+ T
Sbjct: 317 TGAVTTARALDRET 330
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 890 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 944
>gi|149065690|gb|EDM15563.1| rCG59452 [Rattus norvegicus]
Length = 3034
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL + I+VED+NDN P F +Y + +PEDV V T V
Sbjct: 437 EYQLLVE-ANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLR 495
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ + N
Sbjct: 496 VQATDRDQGQNAAIHYSIVSGN 517
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 990 NPNPLSASVEVQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRANDPDEGPNAQI 1049
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1050 MYQIVEGNVPEVFQLDLLSGDLRA 1073
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 787 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 846
Query: 150 NGLFSSD 156
F D
Sbjct: 847 VPQFRID 853
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + TT L R + + H LKV H +P T T+ V D ND++P
Sbjct: 311 FLIDATTGAVTTARALDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 366
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y I E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 367 VFEQSEYRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 426
Query: 165 RSV 167
R+V
Sbjct: 427 RAV 429
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 544 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 600
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 601 HIQAVDADAGENARLQY 617
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 666 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVL 722
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 723 TLRARDRD--ANSVITYQ 738
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLR 158
+P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAT 316
Query: 159 VEWVIN-RSVDQHT 171
V R++D+ T
Sbjct: 317 TGAVTTARALDRET 330
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 890 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 944
>gi|301753513|ref|XP_002912643.1| PREDICTED: protocadherin gamma-B1-like [Ailuropoda melanoleuca]
Length = 826
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R ++ L++ T G +P PL GT I V D NDN P+F Y +S+ E+
Sbjct: 196 LERALDREQKKGLRLILTAMDGGDP-PLSGTTQIRIQVTDANDNAPVFRQDTYKVSLQEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VP GT V V A+D D GVN+++++
Sbjct: 255 VPSGTSVLQVMATDQDEGVNAEITY 279
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-- 144
L + + T+ + D NDN P+F + Y + + E+ P G + VSA D DLG N ++S+
Sbjct: 432 LFSSTSITLHISDINDNVPVFHQASYVVHVAENNPPGASIAQVSAFDPDLGHNGRVSYSI 491
Query: 145 --NELEPNGLFS 154
++LEP L S
Sbjct: 492 VASDLEPRALAS 503
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T GTL +T + L VE + G CN I + D+NDN P
Sbjct: 292 FNLNPNTGDITTNGTLDFE-KTSRYMLVVE-----ARDGGMHTAHCNVQIEIVDENDNAP 345
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S IPED +GTVV + D D G N
Sbjct: 346 EVMLMSSSNQIPEDSNLGTVVALFKVRDRDSGQN 379
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V+D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 550 VLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVL 609
Query: 148 EPN--GLFSSDLRVEWV 162
+ + GLFS LR V
Sbjct: 610 QASEPGLFSLGLRTGEV 626
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I ++D NDN P F + + I E GT + +A D D+G+NS +++ L P+ FS
Sbjct: 121 IEIKDINDNAPDFLTEELEIKIGELTAPGTRFPLKTAFDPDVGMNSLQNYH-LSPSDYFS 179
Query: 155 SDLR--------VEWVINRSVDQHTNK 173
++ E V+ R++D+ K
Sbjct: 180 LTVKHVSDGAKYPELVLERALDREQKK 206
>gi|426227200|ref|XP_004007709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1, partial [Ovis aries]
Length = 2580
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 66 RTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
R EE + L VE +G NPGPL T I+VED+NDN P F +Y + +PEDV V
Sbjct: 159 REEEASYQLLVE-ANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVN 217
Query: 124 TVVQVVSASDADLGVNSKLSWN 145
T V V A+D D G N+ + ++
Sbjct: 218 TPVLRVQATDRDQGQNAAIHYS 239
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P L + + V D NDN P+F + L + E+ PVG+VV + ASD D G N+++
Sbjct: 691 SPVSLSASVEIQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRASDPDEGPNAQI 750
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 751 MYQIVEGNVPEVFQLDLLSGDLRA 774
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
T I V D N + P+F S Y++SI ED PVGT + +SA+D D G N
Sbjct: 522 TAQVFINVTDANTHRPVFQSSHYTVSISEDRPVGTSIATISATDEDTGEN 571
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T L L R + + H LKV H +P T T+ V D ND++P
Sbjct: 38 FLIDADTGLVSTARPLDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 93
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y + E++ VG V + A+D N+ + + LE G+F D R V
Sbjct: 94 VFEQSEYRERVRENLEVGYEVLTIRATDGAAPSNANMRYRLLEGARGIFEIDERSGVVRT 153
Query: 165 RSV 167
R+V
Sbjct: 154 RAV 156
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 277 EYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 333
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 334 HIQAVDADAGENARLRY 350
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 613 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 667
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 399 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVL 455
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 456 TLRALDRD--ANSVITYQ 471
>gi|426253949|ref|XP_004020651.1| PREDICTED: cadherin-19 [Ovis aries]
Length = 770
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGKIRISSKMDRELQ-DEYWVIIQAKDMIGL-PGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
F S Y L++ E PVGT + + A D D+G N+++ ++ + +G F
Sbjct: 255 TFKDSLYRLTVSESAPVGTSIGKIMAYDRDIGENAEMDYSIEDDSGTF 302
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVTQVTASDADDPSSGNNARLVYSLLRGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|126290939|ref|XP_001377582.1| PREDICTED: protocadherin beta-3-like [Monodelphis domestica]
Length = 794
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ + T G +P P GT ++V D NDN+P+F SQY
Sbjct: 188 RKYPELVLGKTLDREEQPEFALTLTAVDGGSP-PKSGTAQIRVLVVDINDNSPVFAQSQY 246
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ IPED P+ ++V VSA+D D G N ++S+
Sbjct: 247 EVQIPEDSPIDSLVVTVSATDLDTGSNGEISY 278
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+++ D NDN P+F + Y+L + E+ + +SASD D G N+K++++ L P
Sbjct: 435 NITVLISDVNDNPPVFTQTAYTLYLQENNNPAFHIGGISASDRDWGSNAKITYSLLPP 492
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND+ P+FP S+ L I E+ P ++ + +A D D+G+N+ ++ + PN F
Sbjct: 122 VLDVNDHEPVFPDSEMLLKILENSPPESLFSLKNALDLDVGINNVQNYT-VNPNSHFRVH 180
Query: 157 LRV--------EWVINRSVDQH 170
R E V+ +++D+
Sbjct: 181 TRTRSDGRKYPELVLGKTLDRE 202
>gi|392334144|ref|XP_003753090.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
gi|392354647|ref|XP_003751815.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
gi|149017303|gb|EDL76354.1| protocadherin beta 16 (predicted) [Rattus norvegicus]
Length = 800
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L R L R EE L++ T G +P P GT + V D NDN P F Y + IPED
Sbjct: 197 LDRVLDREEEAELRLTLTAQDGGSP-PRSGTTEVHVEVLDINDNAPQFEQLFYRVQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+GVN ++S++
Sbjct: 256 SPIGFLIITVSATDKDIGVNGEISYS 281
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+ V D NDN PIF + Y++ + E+ + +SA+D+D G N+ +++
Sbjct: 430 PILKTQVNFTVQVSDVNDNAPIFTQTSYTMFVRENDSPALHIGTISATDSDSGSNAHITY 489
Query: 145 NELEPN 150
+ L P
Sbjct: 490 SLLPPQ 495
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 61 LKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
L +R +EH L E T+ + + G G C V D ND+ P +S ++ S
Sbjct: 298 LTGEVRLKEH-LDFEKTQSYEINIEARDAGTFSGKCTILTQVVDVNDHAPEITLSAFTNS 356
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I E++P T+V V S SD D G N K+S +
Sbjct: 357 ILENLP-ETMVAVFSVSDLDSGENGKISCS 385
>gi|296222841|ref|XP_002757363.1| PREDICTED: cadherin-19 [Callithrix jacchus]
Length = 772
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y LS+ E GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLSVSESAATGTSIGTIMAYDNDIGENAEMEYS 294
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y S+PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEASVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|301774933|ref|XP_002922889.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Ailuropoda melanoleuca]
Length = 2838
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G NPGPL T I+VED+NDN P F +Y + +PEDV V T V V A+D D G N
Sbjct: 255 QGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLRVQATDRDQGQN 314
Query: 140 SKLSWNELEPN 150
+ + ++ + N
Sbjct: 315 AAIHYSIVSGN 325
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 59 GTLKRALRTEEHWLKVENTK----HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
G ++ R + + V N + +GS P PL + + + V D NDN P+F + L
Sbjct: 771 GVIRTQRRLDRENVAVYNLRALAVDRGS-PAPLSASVDIQVSVLDINDNPPVFERDELEL 829
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDLRV 159
+ E+ PVG+VV + A+D D G N+++ + +E N L S DLR
Sbjct: 830 FVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 881
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 595 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 654
Query: 150 NGLFSSD 156
F D
Sbjct: 655 VPQFRID 661
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T L R + + H LKV H +P T T+ V D ND++P
Sbjct: 119 FLIDTATGAVSTARALDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 174
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y + E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 175 VFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRT 234
Query: 165 RSV 167
R+
Sbjct: 235 RAA 237
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 352 EYTLRIK--AQDGGRP-PLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 408
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 409 HIQAVDADAGENARLRY 425
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 474 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVL 530
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 531 TLRARDQD--ANSVITYQ 546
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V +SA+D D G N +L +
Sbjct: 698 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQISATDRDSGPNGRLLY 752
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLRV 159
P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 66 PQFPLPSYQVSVPENEPAGTTVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDTAT 125
Query: 160 EWV-INRSVDQHT 171
V R++D+ T
Sbjct: 126 GAVSTARALDRET 138
>gi|395504792|ref|XP_003756731.1| PREDICTED: protocadherin gamma-A12 [Sarcophilus harrisii]
Length = 847
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE ++ T G +P GT +IV D NDN P+F S YS+SIPE+
Sbjct: 196 LERALDREEEPVHRLILTASDGGDP-VRSGTVRVRVIVLDANDNAPVFTQSVYSVSIPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLS--WN 145
VP+GT + V+A+D D G+N +++ WN
Sbjct: 255 VPMGTWLLTVNATDPDEGINGEVTYFWN 282
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T+ V D NDN P F + YS I E+ P G + V+ASD D N+++++
Sbjct: 430 PLSTDTLITLHVADVNDNPPAFSQTSYSAYIRENNPRGASIYSVTASDPDSEKNAQITYT 489
Query: 146 ELEPNGLFSSD 156
N +F D
Sbjct: 490 --IANDIFQED 498
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
L N + V D NDN P ++ S+PE P GTV+ +++ D D G N
Sbjct: 326 LFARANVLVTVVDVNDNAPEVTIASLITSVPEGSPSGTVIALLNIHDQDSGEN 378
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 84 PGPLVGTCNTTIIVEDQ-------------NDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130
PG L N I++ED+ NDN P F + + + E VG ++ +
Sbjct: 97 PGSLKCLLNVEILLEDKVKIYGLEVEVTDINDNAPRFQEDEVDIEVTEQANVGIKCRLPN 156
Query: 131 ASDADLGVNSKLSWNELEPNGLFSSDLRV--------EWVINRSVDQH 170
A D D+G+N S+ +L PN FS ++ E V+ R++D+
Sbjct: 157 AWDLDMGMNGLQSY-QLSPNPHFSLHVQSKADGAKYPELVLERALDRE 203
>gi|345311060|ref|XP_001510399.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-20 [Ornithorhynchus
anatinus]
Length = 795
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+E + + K G G L GT I + D NDN P FP Y +S+ E PV + V
Sbjct: 228 KESYEVIIQAKDMGGQLGGLAGTATVNISLSDVNDNPPRFPQKHYQMSVSESAPVSSTVG 287
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V A D D G+N++++++ LE +GL + D+ +
Sbjct: 288 RVFAKDPDEGINAEMTYSLLEGDGLDAFDISTD 320
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GP T I VED D P+F + Y + +PEDV +G V+ +SA+D D+ NS
Sbjct: 361 GPFQDTATVHISVEDV-DEPPVFELGTYFVEVPEDVEIGATVRTLSAADPDVTNNS 415
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
P+ I ++D NDN P FP Y ++ E PVGT V V+A+DAD G ++++
Sbjct: 137 PMEPESEFVIKIQDINDNEPRFPDGPYVATVAEMSPVGTSVIQVTATDADDPSYGSSARV 196
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 197 VYSILQGQPYFSVD 210
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP +G+ + T+ V D NDN P FP Y + E+ G V
Sbjct: 447 REEVPWHNLTVLAVEMNNPAQ-IGSVSVTVKVLDVNDNAPEFP-GFYEAFVCENARAGQV 504
Query: 126 VQVVSASDAD 135
+Q +SA D D
Sbjct: 505 IQTLSAVDQD 514
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
+L R R +H++ V GS P L GT IIV+D NDN P F + Y +IPED
Sbjct: 2321 SLDREAR--DHFVLVVTAADAGS-PA-LTGTGTINIIVDDINDNVPTFASNMYFTAIPED 2376
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
P GT V +V+ASDAD N+ +S++ + N F+
Sbjct: 2377 APTGTDVLLVNASDADAATNAVISYSIIGGNSQFT 2411
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L RAL E + + + + G T + D NDN P
Sbjct: 1889 FFLNPVTGVFN----LTRALDYERQQYYILTVRAE--DGGGQFTTIRAYFNILDINDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F +S YS S+ E++P+G+ V V + +DAD GVNS+LS++
Sbjct: 1943 VFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYS 1982
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL TC +I + D+NDN P FP S + + E++ +G +V V+A+D+D GVN+ L +
Sbjct: 1294 PLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHY 1352
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+VP G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 VFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ +
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRY 1137
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E + L V+ T S P +C I + D ND P+F +S YS+++
Sbjct: 2212 TVAKSLDRETIPAYILTVQATDRGSS---PRTDSCTVAITLLDMNDFVPVFELSPYSVNV 2268
Query: 117 PEDVPV--GTVVQVVSASDADLGVNSKLSWNEL---EPNGL---FSSDLRVEWVINRSVD 168
PE++ T++QVV A D D G NS+LS+ L E N S +LRV ++R
Sbjct: 2269 PENLGALPRTILQVV-ARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRVTQSLDREAR 2327
Query: 169 QH 170
H
Sbjct: 2328 DH 2329
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P+GT V V+A D D +N +LS+
Sbjct: 1434 PLGTSVISVTAHDPDADINGQLSY 1457
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++V D NDNNP+F + Y + I E+ GT + VSA+D D G N ++ +
Sbjct: 2133 PLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYG 2192
Query: 146 ELEPNGLFSSDLRVEWV-----INRSVDQHT 171
+ G + R++ V + +S+D+ T
Sbjct: 2193 IV--GGNTHQEFRIDSVTGAITVAKSLDRET 2221
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I + D ND+ P F YS IPED G++V + A+D D GVN ++S+ E + +G+
Sbjct: 1829 ITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGV 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F ++ ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3178 GYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAY 3233
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P+F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPMF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPAG 2094
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN PIF +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPIF-ISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFTVDRYSGDLRV 1586
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
K KG NP PL I V ++N + P F S S +IPE +G+VV+ VSA D D
Sbjct: 3064 KDKG-NP-PLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSVVRTVSARDRDTA 3121
Query: 138 VNSKLSWN 145
+N +S+N
Sbjct: 3122 MNGLISYN 3129
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P T + + D NDN+P+F QY I E+ P G+ V VSA+D D+G N + ++
Sbjct: 668 PQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYS 727
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2857 STDVTIFVTDINDNTPRFSRPSYYLDCPELTELGSRVTQVSATDPDEGSNGQVFYFIKSK 2916
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2917 SEYFRINATTGEIFNKQVLKYQN 2939
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P V + V D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAE 626
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2460 DVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYS 2506
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ G+ G + I V D ND P+F ++ Y + I E
Sbjct: 3361 GLLDRE-KEERVSLKVL-AKNFGNIRGADIDEVTVNITVLDANDP-PVFSLNTYRVQISE 3417
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3418 GVPIGTHVTFVSAFDSD 3434
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-----NELE 148
T+ V D NDN P+F Y +++ E PV + V A D D G N ++++ N E
Sbjct: 983 TVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGE 1042
Query: 149 PNGLF 153
G+F
Sbjct: 1043 AFGIF 1047
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V D DN P+F + YS + E+V +G V VSA+ DL N + G+F
Sbjct: 780 TVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMF 839
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 840 AMNPVTGQLTTASVIDR 856
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI D NDN P F ++Y + ++V VGT +++V + D D
Sbjct: 2956 TASDRGNPS-LLSETTVTINTVDSNDNPPQFLKNKYFTPVTKNVKVGTKLIKVTAVDDKD 3014
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS++ + N G F D W+
Sbjct: 3015 FGLNSEVEYFVSNGNHLGKFKLDNDTGWI 3043
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSN 167
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 95 IIVEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
I V D+NDN P F SQ +S + E+ P+G V V+ SD D+G+N+
Sbjct: 2763 ISVLDENDNAPRF--SQIFSAYVSENSPLGYTVTRVTTSDEDIGINA 2807
>gi|380811948|gb|AFE77849.1| cadherin-19 preproprotein [Macaca mulatta]
gi|380811950|gb|AFE77850.1| cadherin-19 preproprotein [Macaca mulatta]
Length = 772
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSVEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIG-QPGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P G + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGNSIGTIMAYDNDIGENAEMDYS 294
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IKVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|345312186|ref|XP_003429218.1| PREDICTED: cadherin-7-like [Ornithorhynchus anatinus]
Length = 193
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 56 KNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+ + +K AL ++ +L V K G L GT + T+ + D NDN P FP
Sbjct: 43 RYISVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRR 102
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
Y ++PE +PV +VV + A+DAD+G N+++ + ++ +GL V SVD+
Sbjct: 103 SYQYNVPESLPVASVVARIKAADADVGPNAEMEYKIVDGDGL--------GVFKISVDKE 154
Query: 171 TNK 173
T +
Sbjct: 155 TQE 157
>gi|332234728|ref|XP_003266556.1| PREDICTED: protocadherin beta-13-like [Nomascus leucogenys]
Length = 801
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
PVG +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENQ 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 430 PMLKTQLNMTVLVADINDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
Query: 145 NELEPN 150
+ L P
Sbjct: 490 SLLPPQ 495
>gi|426350336|ref|XP_004042733.1| PREDICTED: protocadherin gamma-A5 [Gorilla gorilla gorilla]
Length = 813
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + +++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|194219828|ref|XP_001504126.2| PREDICTED: protocadherin beta-16 [Equus caballus]
Length = 795
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE + + T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPEILLTLTAMDGGSP-PRYGTAQVRIEVVDSNDNAPEFGQPFY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
+ IPE+ PVG++V VSASD D GV K+S+ +P+ S L V V
Sbjct: 248 RVHIPENSPVGSLVVTVSASDLDSGVYGKISYTLFQPSEDISKTLEVNSV 297
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDMNDNPPEVTISALTSPIPENTP-EIVVAVFSVSDPDSGDN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + VSA+D D G N++L+++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQLTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS-- 154
V+D ND++P+F + L IPE+ P+G + +A D D+G N+ ++ ++ PN F
Sbjct: 123 VKDINDHSPMFTEREMILKIPENSPLGIAFPLSNALDLDVGSNNVENY-KISPNSHFQVL 181
Query: 155 ----SDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 182 TRNRSDGRKYPELVLDKELDRE 203
>gi|14196471|ref|NP_114443.1| protocadherin gamma-A5 isoform 2 precursor [Homo sapiens]
gi|5457072|gb|AAD43772.1|AF152512_1 protocadherin gamma A5 short form protein [Homo sapiens]
gi|85397801|gb|AAI04927.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
gi|109730483|gb|AAI13461.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
gi|119582342|gb|EAW61938.1| hCG1982215, isoform CRA_q [Homo sapiens]
gi|313883554|gb|ADR83263.1| Unknown protein [synthetic construct]
Length = 813
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + +++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + SI ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACS 385
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+ E+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|403256578|ref|XP_003920946.1| PREDICTED: uncharacterized protein LOC101030039 [Saimiri boliviensis
boliviensis]
Length = 2605
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 1319 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVRIEVVDINDNAPEFEQPIY 1377
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+G++V VSA D D G N K+S+ +P+ + L V
Sbjct: 1378 KVQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDINKTLEV 1424
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTALVLIEVVDSNDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+ ++V VSA D D G N K+S+ +P+ S L V
Sbjct: 248 KVQIPENSPLDSLVATVSARDLDSGANGKISYTFFQPSEDTSKTLEV 294
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 766 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTALVLIEVVDSNDNAPEFEQPIY 824
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ P+ ++V VSA D D G N K+S+ +P+ S L V
Sbjct: 825 KVQIPENSPLDSLVATVSARDLDSGANGKISYTFFQPSEDTSKTLEV 871
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P P T I+V D NDN P F + Y PE+
Sbjct: 1797 LDKALDREEQGELSLTLTALDGGSP-PRSATSTVNILVLDVNDNAPQFTEALYETQAPEN 1855
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG+++ VSA D D GVN +++++
Sbjct: 1856 SPVGSLIVKVSAEDVDSGVNGEVAYS 1881
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND++P+F + L IPE+ PVG V + SA D+D+GVN+ S+ + PN F
Sbjct: 2344 VRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDSDVGVNAVKSYT-ISPNSHFHIK 2402
Query: 157 LRV--------EWVINRSVD 168
+RV E V+++++D
Sbjct: 2403 MRVNPDNRKYPELVLDKALD 2422
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 897 KAADGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 955
Query: 140 SK 141
K
Sbjct: 956 GK 957
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P V+ V S SD D G N
Sbjct: 320 KAADGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVIAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P V+ V S SD D G N
Sbjct: 1450 KAADGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVIAVFSVSDPDSGNN 1508
Query: 140 SK 141
K
Sbjct: 1509 GK 1510
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V D ND++P+F + +L IPE+ G ++ A D D G+NS ++ + PN F
Sbjct: 1724 VRDINDHSPVFQDKETALKIPENTAEGAAFRLERAQDPDGGLNSIQNYT-ISPNSFFHIK 1782
Query: 154 --SSD---LRVEWVINRSVDQH 170
SD + E V+++++D+
Sbjct: 1783 ISGSDEGMIYPELVLDKALDRE 1804
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G L C + V D NDN P VS S S+ E+ P G ++ V D D G N K+
Sbjct: 1926 GGLSARCTVVVEVLDTNDNPPELIVSSLSNSVAENSP-GMILAVFKIKDRDSGENGKM 1982
>gi|440898403|gb|ELR49911.1| Cadherin-19 [Bos grunniens mutus]
Length = 770
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGKIRISSKMDRELQ-DEYWVIIQAKDMIGL-PGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E PVGT + + A D D+G N+++ ++
Sbjct: 255 IFKDSLYRLTVSESAPVGTSIGKIMAYDRDIGENAEMDYS 294
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLVYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 1179
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + G L R R E + L++ + P PL + V+D NDN P
Sbjct: 956 FRVDPVTGVLSVFGKLDRE-RQEIYELRIRARDNSNDTP-PLHSDALVRVTVDDVNDNAP 1013
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSD 156
F +S Y++ I EDVP+ TVV VV A+D D G + + + +E G F D
Sbjct: 1014 TFALSNYNVKIREDVPIWTVVAVVDATDPDEGAGGDVEYFLSDAMESEGFFKVD 1067
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVE--DQNDNNPIFPVSQYS 113
NV L R R + + L V T K N ++ +TT++V D ND NP+F +Y
Sbjct: 163 NVDVLNRE-RKDRYVLVVRATWSKRDNRNRAILLEADTTVVVTILDTNDLNPLFYPIEYE 221
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++ ED P+ + V A DADLG N ++ ++ E F+
Sbjct: 222 TTVTEDTPLHRSILRVIAEDADLGRNGEIYYSFAEETDQFA 262
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I V D NDN+P F + + I E+ P GT V V+A D D G N+ +S++
Sbjct: 525 SAKVKINVVDTNDNDPTFDQPEMEVMIDENEPAGTSVVRVTAKDRDSGENAYISYS 580
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I + D NDN P F S S I E GT V +A+DADLG N++++++ + F
Sbjct: 898 ITILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGDNARVTYSLVTETNDFR 957
Query: 155 SD 156
D
Sbjct: 958 VD 959
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN P+F Y + +PE P+ T + + +DAD G N+
Sbjct: 427 DVNDNAPVFSREIYEVKVPETAPINTPIIRLKVTDADEGKNA 468
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2253 ETKEHFVLIVTATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKLYFTTIPEDAPTGTD 2310
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V +V+ASDAD N+ +S+ + N F+
Sbjct: 2311 VLLVNASDADTSTNAVISYRIIGGNSQFT 2339
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T E++ V + GS PGPL + + + V D NDN
Sbjct: 2336 SQFTINPSTGQIITSALLDR--ETRENYTLVVVSSDAGS-PGPLSSSTSVLVTVTDVNDN 2392
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP P G V V+ +DAD+G NS+L ++
Sbjct: 2393 PPRFQHHPYVTHIPSPTPPGAFVFAVTVTDADIGPNSELHYS 2434
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + T ++ L VE K KG G + V+D NDN P+F S Y +PE
Sbjct: 206 GGLDREV-TPQYQLLVE-VKDKGEPK--RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D VG+ V V+A+DAD G N+ + +
Sbjct: 262 DAAVGSSVLQVAAADADEGTNADIRY 287
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL--S 143
PL T N T+I+ED NDN P+F + YS E+ G+ V VSA D D G N ++ S
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYSFYFEEEQKAGSFVGKVSAVDKDFGPNGEVRYS 1138
Query: 144 WNELEPN 150
+ ++P+
Sbjct: 1139 FEMVQPD 1145
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GS P T +I++ D ND PIF +S YS+ +PE++
Sbjct: 2149 KTPVYSLTVQATD-RGSTP--RTDTATVSIVLLDSNDFVPIFELSPYSVHVPENLGTLPR 2205
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLF-SSDLRVEWVINRSVDQH 170
T++QVV A D D G NSKLS+ NE L S +LRV ++R +H
Sbjct: 2206 TILQVV-ARDDDQGSNSKLSYVLFGGNEDSAFTLSDSGELRVTQSLDRETKEH 2257
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND++P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1785 ITVSDVNDHSPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYSVNEDDEDGI 1844
Query: 153 F 153
F
Sbjct: 1845 F 1845
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +L++ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLAYTIIQ 1461
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
I V D ND+ P+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 463 IFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P V N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG+N
Sbjct: 665 GSPPQSSVARINVSLL--DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGLNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TIKYS 727
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1298 TCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ V A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPVF-ISQNALAADPSAVIGSVLTTVMAADPDEGANGEVEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
FS DLRV
Sbjct: 1573 DTFVVDRFSGDLRV 1586
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 1845 FFLNPVTGVFN----LTRILDYEAQQYYILTVRAE--DGGGQFTTIRVYFNILDVNDNPP 1898
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S YS S+ E++P+G+ V V + +DAD G+NS+L+++
Sbjct: 1899 IFSSSSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYS 1938
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + T++V D NDNNP+F + Y + + E+ GT + V A+D D G N ++ +
Sbjct: 2062 LSSSTEVTVMVLDINDNNPVFAQALYQVEMNENTLTGTDIIQVYAADGDEGTNGQVRYGI 2121
Query: 147 LEPNGLFSSDLRVEWV 162
++ N + + R++ V
Sbjct: 2122 VDGNA--NQEFRIDSV 2135
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS--KL 142
P V + + D ND P+F Q Y +S+ E+ P GT + V+ A+D DLG N +
Sbjct: 561 PKVSYAQLVVTLLDVNDEKPVFSQPQGYEVSVVENAPTGTELLVLRATDGDLGDNGTVRF 620
Query: 143 SWNELE 148
S E E
Sbjct: 621 SLQEAE 626
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNANISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P+F Y +++ E PV + V A D D G N +++++ E N
Sbjct: 983 TVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGN 1039
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
>gi|403283170|ref|XP_003933000.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Saimiri boliviensis boliviensis]
Length = 2759
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F N ++ + L R E+ L VE + +G NPGPL T I VED+NDN P
Sbjct: 197 FQLNASSGVVSTRAVLDRE-EAAEYQLLVEASD-QGRNPGPLSATATVYIEVEDENDNYP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
F Y + +PEDV + T V V A+D D G N+ + ++ L N
Sbjct: 255 QFSEQNYVVQVPEDVGLNTAVLRVQATDRDQGQNAAIHYSILSGN 299
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I + D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 569 TAHVLINITDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 628
Query: 150 NGLFSSD 156
F D
Sbjct: 629 VPQFRID 635
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 114 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 170
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D VN+ + + L
Sbjct: 171 TIRASDRDSPVNANMRYRML 190
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P L + + + D NDN P+F + L + E+ PVG+VV + A D D G N
Sbjct: 770 RGS-PAALSASVEVQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAQDPDEGPN 828
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 829 AQIMYQIVEGDMRHFFQLDLLNGDLRA 855
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 334 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYSVVHIQAVDADSG 392
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 393 ENARLRYRLVDTASAF 408
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 672 TTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 726
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 30 PKSGMYAPAFTFSIAKFIANPTTRLYKNVG--TLKRALRTEE--HW-LKVENTKHKGSNP 84
PK+ + AP F F I + + G TL L EE H+ VE H
Sbjct: 416 PKNPVPAPDFPFQI-----------HNSSGWITLCAELDREEVEHYSFGVEAVDHGSP-- 462
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+ + + +I V D NDN+P+F Y L + ED VG+ V + A D D NS +++
Sbjct: 463 -PMSSSTSVSITVLDVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRD--ANSVITY 519
Query: 145 N 145
Sbjct: 520 Q 520
>gi|403256584|ref|XP_003920949.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1136
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P+F + Y + +PE+ P+G++
Sbjct: 793 REEQAELRLTLTALDGGSP-PRSGTAQILILVLDANDNAPVFAQALYEVQVPENSPIGSL 851
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 852 VVKVSARDLDTGTNGEISYS 871
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ G P P GT I + D NDN P F Y + + E+
Sbjct: 194 LDKALDREEQSELRLTLMAVDGGAP-PRTGTALVLIEILDINDNAPEFVQPLYQVQVSEN 252
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+ ++V VSA D D+G+N ++ ++
Sbjct: 253 SPLESLVATVSARDLDMGINGEIFYS 278
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN+P+FP + L I E+ P GT+ +++A D D+G+N
Sbjct: 119 LLVSDINDNSPVFPEGEMILKIMENTPPGTIFPLINAQDLDVGIN 163
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K S+ L G C I V D NDN P ++ + SIPE+ P T V + S D D G N
Sbjct: 318 KASDRAGLSGKCTVKIQVVDINDNAPELTMASFRSSIPENSP-ETTVALFSIQDRDSGEN 376
Query: 140 SKL 142
++
Sbjct: 377 GRI 379
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN+P +S + IPE+ P T V + D D G N
Sbjct: 911 EASDGGGLSGKCSVSVKVLDVNDNSPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 969
Query: 140 SKLSWN 145
K++ +
Sbjct: 970 GKMTCS 975
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND++P FP + +L IPE GTV + A D D+G N+ +++ + PN F
Sbjct: 714 VRDINDHSPEFPEREMTLKIPEISSPGTVFPLKKAWDLDVGSNNVQNYS-ISPNSHFHVS 772
Query: 157 LRV--------EWVINRSVDQH 170
R+ E V++ +D+
Sbjct: 773 TRIRGDGRKYPELVLDTELDRE 794
>gi|397517976|ref|XP_003829179.1| PREDICTED: protocadherin gamma-B5 [Pan paniscus]
Length = 818
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G NP PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGNP-PLSGTTELQIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|332234734|ref|XP_003266559.1| PREDICTED: protocadherin beta-16 [Nomascus leucogenys]
Length = 776
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE LK+ T G +P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLKLTLTALDGGSPS-RSGTAQVCIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
IPE+ P+G++V VSA D D G N K+S+ +P+ S L V E +++ V
Sbjct: 248 KAQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGEIRLSKQV 307
Query: 168 DQHT 171
D T
Sbjct: 308 DFET 311
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
>gi|338728131|ref|XP_001491702.2| PREDICTED: cadherin-19 [Equus caballus]
Length = 772
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMLGL-PGALSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESLYRLTVSESAPTGTSIGKIMAYDNDIGENAEMDYS 294
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLRGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|395817815|ref|XP_003782343.1| PREDICTED: protocadherin beta-8 [Otolemur garnettii]
Length = 1217
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE LK+ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 766 LDKALDREEEPELKLTLTALDGGSP-PRSGTAQVYIEVVDFNDNAPEFEQPFYRVQIPED 824
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+G V VSA+D D+G+N ++S+
Sbjct: 825 SPIGFPVVTVSATDIDIGINGEISY 849
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT I+V D NDN P F S Y + +PE+ P+G++V VSA D D G N ++ +
Sbjct: 220 GTALVRILVVDINDNAPEFVQSLYKVQMPENSPIGSMVVSVSARDLDTGSNGEIVY 275
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + +SA+D D G N++++++ L P
Sbjct: 1006 NITVLVSDINDNAPTFTQTSYTLFVRENNSPALHIGTISATDRDSGTNAQVTYSLLPPQ 1064
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+D D G N++++++ L P
Sbjct: 434 TLLVSDINDNAPTFTQTSYTLFVRENNSPALHIGTISATDRDSGTNAQVAYSLLPPQ 490
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F V++ L I E GT + SA D D+G NS LS + PN F +
Sbjct: 119 IRDINDHSPVFLVTEIPLKILESTTPGTAFLLESAQDLDVGNNS-LSNYTISPNAYFHIN 177
Query: 157 LRV--------EWVINRSVDQH 170
+ V E V+++ +D+
Sbjct: 178 VHVSEEGNIYPELVLDQVLDRE 199
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L G C + V D NDN+P +S ++ I E+ P TVV V D D G N
Sbjct: 316 QAKDGGGLSGKCTVVVEVTDINDNSPELLMSSFTSPIAENSP-ETVVAVFRIRDKDSGNN 374
Query: 140 SKL 142
K+
Sbjct: 375 GKM 377
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 49 NPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
N T R+ G ++ + + ++ + + G G C + V D ND+ P
Sbjct: 859 NKTFRINPLTGEIQLKKQLDFETIQSYEINIEARDAGSFSGKCTVLVQVMDVNDHAPEVT 918
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+S ++ S+ E++P +VV V S SD D N K+S +
Sbjct: 919 MSAFTSSVSENLP-ESVVAVFSVSDLDSEENGKISCS 954
>gi|149732972|ref|XP_001500811.1| PREDICTED: cadherin-6-like [Equus caballus]
Length = 790
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+ + ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAAIEYSITEGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D PIF
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPIFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + VSA D D N
Sbjct: 387 AYILQIREDAQINTTIGSVSAQDPDAARN 415
>gi|335283648|ref|XP_003124046.2| PREDICTED: protocadherin gamma-B7-like [Sus scrofa]
Length = 810
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y + +PED
Sbjct: 199 TLDRETQSAHHLVL---TAVDGGDP-PRSGTTQIRILVVDANDNPPVFTQDVYKVRLPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT V VSA+D D GVN++++++ L
Sbjct: 255 VPPGTFVLKVSATDLDEGVNAEITYSFL 282
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + T+ + D NDN P+F + Y + + E
Sbjct: 408 GTLDRE-QTPEYNVTITATDRGKP---PLSSSTTITLHIADVNDNAPVFQQASYEVHVAE 463
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFS 154
+ P G + VSA D DLG N +S++ +LEP L S
Sbjct: 464 NNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALAS 503
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
VED ND+ P F ++ L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 123 VEDINDHAPQFHKNEIHLEISESVSPGMRTILESAKDPDISLNS-LSKYQLSPNEYFS 179
>gi|11056024|ref|NP_061741.1| protocadherin gamma-A5 isoform 1 precursor [Homo sapiens]
gi|37999838|sp|Q9Y5G8.1|PCDG5_HUMAN RecName: Full=Protocadherin gamma-A5; Short=PCDH-gamma-A5; Flags:
Precursor
gi|5456942|gb|AAD43719.1| protocadherin gamma A5 [Homo sapiens]
gi|119582351|gb|EAW61947.1| hCG1982215, isoform CRA_z [Homo sapiens]
Length = 931
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + +++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + SI ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACS 385
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+ E+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|127139390|ref|NP_001076032.1| protocadherin gamma-A5 precursor [Pan troglodytes]
gi|62510868|sp|Q5DRB5.1|PCDG5_PANTR RecName: Full=Protocadherin gamma-A5; Short=PCDH-gamma-A5; Flags:
Precursor
Length = 931
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + +++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + +L R R + + ++V+ T G G L + TI+V D NDN P
Sbjct: 3178 FSIDPVTGVVVLEKSLDRESR-DSYRVRVQATDRAGQQ-GALSSQVDLTILVLDVNDNAP 3235
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEW 161
+F Y++++PEDV VGT V V A+ AD+G N+++++N N L + +W
Sbjct: 3236 VFQRRDYAVTVPEDVAVGTEVVRVLATSADIGPNAEITYNIRSGNELGKFTIDRKW 3291
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
C +++ D+NDN P F +Y +SI +V G++V + A+D D G N +++++
Sbjct: 2570 CTVRVVLADENDNAPRFRAVEYRMSIKANVAKGSLVTQIQATDPDAGSNGRITYSLYSEA 2629
Query: 151 GLFSSD-LRVE----WVINRSVDQH 170
L D L VE W++ +S H
Sbjct: 2630 RLSLVDVLEVEPDSGWMMTKSTVDH 2654
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K S PG L I V D ND P+F + Y+ + E P+G + V+A+DAD+G N
Sbjct: 110 KASAPGGLEALTTVYIRVLDTNDLRPLFSPTSYAFVVSESAPLGASIGRVTATDADVGSN 169
Query: 140 SKLSW 144
+ +
Sbjct: 170 GEFYY 174
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+I+ED NDN+P F YS + E+ +G V ++A D D+G N +LS+
Sbjct: 795 TVIIEDTNDNDPQFYQDSYSALVSENSAIGMEVITITAFDRDMGQNGQLSY 845
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ W + T ++ G V + V D NDN PI + YS S PEDVP+
Sbjct: 2992 REQQDWYLLNIT----ASDGLYVAHTAVEVTVMDANDNRPICNQAVYSTSFPEDVPINKG 3047
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V A+DAD G ++++ ++
Sbjct: 3048 ILRVGATDADSGSSAEIQYS 3067
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGL 152
+II+ED ND +P F + YS + ED+P GTV+ V A D D+G ++ ++ + + NG
Sbjct: 900 SIILEDVNDCSPAFIPTSYSARVLEDLPPGTVITWVQAQDPDIGPGGQVRYSLINDFNGT 959
Query: 153 F 153
F
Sbjct: 960 F 960
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V T + + + D NDN P+F S Y ++ E +PVGT V V A D D G N +++++
Sbjct: 2781 VSTVDLEVKILDVNDNKPLFETSTYVATVMEGMPVGTRVVQVRALDPDWGSNGQVTYS 2838
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L VGTL A + V N + ++ G T I ++D NDN P+F + Y
Sbjct: 1384 LQLGVGTLVVAKPLDAEVQSVYNMTVQVTD-GTNFATAQVFIRIQDSNDNPPVFSLPAYD 1442
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+S+ ED+PV + V ASD D
Sbjct: 1443 ISVSEDIPVDMELLRVRASDID 1464
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
++++L +E NP PL TI + D NDN P F Y+L + ED VG V
Sbjct: 3306 KDYYLTIE--AWDNGNP-PLSTATMVTIELMDVNDNAPAFSQDIYNLLVSEDASVGQTVT 3362
Query: 128 VVSASDADLGVNSKLSWNELE 148
V A D D VN +++++ L+
Sbjct: 3363 RVVAEDLDSQVNGRITYSILK 3383
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
N G L+ A+ + + ++ G L + + V D NDN P+F + Y S+
Sbjct: 3081 NTGELRTAIVMDRELAPSYKLIAQATDGGGLFCRSDIFLKVLDVNDNAPLFSSTHYLASV 3140
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEP-NGLFSSD-LRVEWVINRSVDQHT 171
E+ ++ + ASD D G+N + ++ ++ NG FS D + V+ +S+D+ +
Sbjct: 3141 YENASPKALLTRLQASDPDEGLNRTVLYSLVDSVNGFFSIDPVTGVVVLEKSLDRES 3197
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTT---IIVED 99
F NP T L + T R L E EH+L++ GP+ +T + V+D
Sbjct: 1173 FSINPKTGL---ITTTARKLDREQQAEHFLEITVID------GPVTTRQSTVWVIVHVQD 1223
Query: 100 QNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSS 155
+NDN P FP Y +S+PE G V V A D D G N ++++ + N FS
Sbjct: 1224 ENDNPPTFPEVTYRISLPERDRNKRGEPVYRVFAYDRDYGANGNITYSIISGNEDEKFSI 1283
Query: 156 DLRVEWVINRSV 167
D R V ++ +
Sbjct: 1284 DPRTAMVSSKKM 1295
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
+ VED NDN P F + Y + E VGT V V+A D D G+N +L++ N G+
Sbjct: 1530 VAVEDSNDNIPYFTSTVYDATAYETFSVGTSVVQVTALDKDNGLNGQLTYTIEAGNTGGV 1589
Query: 153 FSSD 156
F D
Sbjct: 1590 FGID 1593
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
PL T TI V D NDN P+F Y +I E P+G VV ++ D D
Sbjct: 2903 PLSSTTVVTITVSDVNDNPPLFERELYRGAIKESDPLGEVVAILKTKDRD 2952
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T++V + D+ +F YS SIPE++P T+V VVS L N L + L P G F
Sbjct: 1955 TVLVREAIDSGILFTFPVYSASIPENIPNITLVTVVSTVGHRL--NEPLKYTLLNPVGRF 2012
Query: 154 S 154
S
Sbjct: 2013 S 2013
>gi|344272257|ref|XP_003407951.1| PREDICTED: cadherin-6 [Loxodonta africana]
Length = 790
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYHVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITEGEGL 313
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + K P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAVNRKTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ K K + SNP GP + I VED D P+F
Sbjct: 330 TVKKLLDFEKK--KAYTLKVEASNPHVEPRFLYLGPFKDSATVRITVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|350581232|ref|XP_003480993.1| PREDICTED: protocadherin gamma-B7-like [Sus scrofa]
Length = 809
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y + +PED
Sbjct: 199 TLDRETQSAHHLVL---TAVDGGDP-PRSGTTQIRILVVDANDNPPVFTQDVYKVRLPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT V VSA+D D GVN++++++ L
Sbjct: 255 VPPGTFVLKVSATDLDEGVNAEITYSFL 282
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 46 FIANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F + + + YK V GTL R +T E+ + + T P PL + T+ + D NDN
Sbjct: 392 FKIHSSKKYYKLVTDGTLDRE-QTPEYNVTITATDR--GKP-PLSTSTTITLHIADVNDN 447
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFS 154
P+F + Y + + E+ P G + VSA D DLG N +S++ +LEP L S
Sbjct: 448 APVFQQASYEVHVAENNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALAS 502
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ +++ED ND+ P F ++ L I E V GT + SA D D+ +NS LS +L PN
Sbjct: 118 DIVVVIEDINDHAPQFHKNETHLEIIESVSPGTRTILESAKDPDISLNS-LSKYQLSPNE 176
Query: 152 LFS 154
FS
Sbjct: 177 YFS 179
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + VE K +GS L C I V D+NDN+P ++ S I ED G VV
Sbjct: 313 ERYTIDVE-AKDRGS----LSTQCKVIIEVLDENDNSPEIIITSLSDQILEDSHPGMVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N +++ N
Sbjct: 368 LFKTRDRDSGGNGEVTCN 385
>gi|224045062|ref|XP_002199117.1| PREDICTED: cadherin-10 [Taeniopygia guttata]
Length = 789
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP S L IPE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESSPVGTAIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V A+DAD G N+++ + ++ +G
Sbjct: 291 VKATDADTGKNAEVEYRIIDGDG 313
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEVYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D P+F S Y + ED+ +GT++ V A D D
Sbjct: 363 GPFKDTIIVKISVEDV-DEPPVFSRSSYLFEVHEDIELGTIIGTVMARDPD 412
>gi|296193016|ref|XP_002744324.1| PREDICTED: protocadherin gamma-A5 [Callithrix jacchus]
Length = 813
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT + ++V D NDN P+F S+YS+S+PE++PVGT + ++A+D D G+N KL+++
Sbjct: 222 LSGTTHIRVMVLDANDNAPLFTQSEYSVSVPENIPVGTRLLTLTATDPDEGINGKLTFS 280
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESRFYFMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED P GTV+ + S D D G N +++ +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSLSEDCPPGTVIALFSVHDDDYGENGEIACS 385
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P F + YS S+PE+ P G + V A D D G N++++++
Sbjct: 431 PLSTVNHIPLKVADVNDNPPNFLQTSYSTSLPENNPRGVSIFSVMAHDPDSGDNARITYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|397518016|ref|XP_003829196.1| PREDICTED: protocadherin beta-17-like [Pan paniscus]
Length = 796
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P +GT I++ D NDN P F +Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 256 TPIGSLVITVSARDLDAGTHGELSYS 281
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S I E+
Sbjct: 304 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDILENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKM 382
>gi|348552360|ref|XP_003461996.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Cavia
porcellus]
Length = 3172
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I+VED+NDN P F +Y + +PED+ V T V
Sbjct: 586 EYQLLVE-ANDQGRNPGPLSATATVHILVEDENDNYPQFSEKRYVVQVPEDLAVNTPVLR 644
Query: 129 VSASDADLGVNSKLSWN 145
V A+D D G N+ + ++
Sbjct: 645 VQATDRDQGQNAAIHYS 661
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 936 TVQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTPIATISATDEDTGENARITYVLEDP 995
Query: 150 NGLFSSD 156
F D
Sbjct: 996 VPQFRID 1002
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P L + + + V D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 1140 PAALSASVDIQVTVLDINDNPPVFERDELELFVEENSPVGSVVAKIHANDPDEGPNAQIM 1199
Query: 144 WNELEPN-------GLFSSDLRV 159
+ +E N L S DLR
Sbjct: 1200 YQIVEGNVPEVFQLDLLSGDLRA 1222
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + T L R + + H LKV H +P T T+ V D ND++P
Sbjct: 460 FLIDGATGTVSTARELDRETK-DTHVLKVSAVDH--GSPRRSAAT-YLTVTVSDTNDHSP 515
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSDLRVEWVIN 164
+F S+Y + E++ VG V + A+D D N+ + + LE G+F D R V
Sbjct: 516 VFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGSGGVFEIDARSGVVRT 575
Query: 165 RSV 167
R+V
Sbjct: 576 RAV 578
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 692 REYTLRIK--AQDGGRP-PLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHSV 748
Query: 127 QVVSASDADLGVNSKLSW 144
+ A DAD G N++LS+
Sbjct: 749 LHIQAVDADSGENARLSY 766
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 815 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPLYELRLNEDAAVGSSVL 871
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 872 TLRARDRD--ANSVITYQ 887
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
NP FP+ Y +S+PE+ P GT V + A D D G +LS+
Sbjct: 406 NPQFPLPSYQVSVPENQPAGTTVIELVAHDPDEGEAGRLSYQ 447
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 1039 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 1093
>gi|355785087|gb|EHH65938.1| hypothetical protein EGM_02811, partial [Macaca fascicularis]
Length = 988
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 87 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 145
Query: 129 VSASDADLGVNSKLSWNELEPNGLFSS 155
V A+D D G N+ + ++ L +GL +S
Sbjct: 146 VQATDRDQGQNAAIHYSIL--SGLINS 170
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 391 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 450
Query: 150 NGLFSSD 156
F D
Sbjct: 451 VPQFRID 457
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 59 GTLKRALRTEEHWLKVEN----TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
G ++ R + + V N +GS P PL + + + D NDN P+F + L
Sbjct: 567 GVIRTQRRLDRENVAVYNLWALAVDRGS-PTPLSASVEIQVTILDINDNAPMFEKDELEL 625
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDLR 158
+ E+ PVG+VV + A+D D G N+++ + +E + L + DLR
Sbjct: 626 FVEENNPVGSVVAKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLR 676
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
T T++V+D ND++P+F S+Y + E++ VG V + ASD D VN+ L + L
Sbjct: 1 TTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSPVNANLRYRVL 58
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 72 LKVENT-KHKGSNPGP----LVGTCNTTIIVE----DQNDNNPIFPVSQYSLSIPEDVPV 122
L+V+ T + +G N L G N++ +V D NDN PIF S + ++ E+VP+
Sbjct: 144 LRVQATDRDQGQNAAIHYSILSGLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPL 203
Query: 123 GTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
G V + A DAD G N++L + ++ F
Sbjct: 204 GYPVVHIQAVDADSGENARLHYRLVDTASAF 234
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 494 TTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 548
>gi|345776762|ref|XP_538324.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Canis
lupus familiaris]
Length = 3106
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G NPGPL T I+VED+NDN P F +Y + +PEDV V T V V A+D D G N
Sbjct: 536 QGRNPGPLSATATVHIVVEDENDNYPQFGEKRYVVQVPEDVAVNTPVLRVRATDRDQGQN 595
Query: 140 SKLSWN 145
+ + ++
Sbjct: 596 AAIHYS 601
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 59 GTLKRALRTEEHWLKVENTK----HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
G ++ R + + V N + +GS P PL + + V D NDN P+F + L
Sbjct: 1052 GVIRTQRRLDRENVAVYNLRALAVDRGS-PAPLSASVEIQVSVLDINDNPPVFERDELEL 1110
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDLRV 159
+ E+ PVG+VV + A+D D G N+++ + +E N L S DLR
Sbjct: 1111 FVEENSPVGSVVAKIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1162
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 876 TAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDP 935
Query: 150 NGLFSSD 156
F D
Sbjct: 936 VPQFRID 942
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V
Sbjct: 633 EYTLRIK--AQDGGRP-PLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 689
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 690 HIQAVDADAGENARLRY 706
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGL 152
T+ V D ND++P F S+Y + E++ VG V + A+D D N+ + + LE G+
Sbjct: 444 TVTVSDTNDHSPAFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAEGV 503
Query: 153 FSSDLRVEWVINRS 166
F D R V R+
Sbjct: 504 FEIDARSGVVRTRA 517
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + VE H P+ + + +I V D NDN+P+F Y L + ED VG+ V
Sbjct: 755 EHYSFGVEAVDHGSP---PMSSSASVSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVL 811
Query: 128 VVSASDADLGVNSKLSWN 145
+ A D D NS +++
Sbjct: 812 TLRARDRD--ANSVITYQ 827
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 979 TTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 1033
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFSSDLRV 159
P FP+ Y +S+PE+ P GT V + A D D G +LS+ + NG F D
Sbjct: 347 PQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAAT 406
Query: 160 EWV-INRSVDQHT 171
V R++D+ T
Sbjct: 407 GAVSTARALDRET 419
>gi|270047473|ref|NP_001161798.1| protocadherin beta-17 precursor [Pan troglodytes]
gi|62510876|sp|Q5DRC3.1|PCDBH_PANTR RecName: Full=Protocadherin beta-17; Short=PCDH-beta-17; AltName:
Full=Protocadherin beta-16; Flags: Precursor
Length = 795
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P +GT I++ D NDN P F +Y + +PE+
Sbjct: 196 LDQALDREEQPQLRLTLTALDGGSP-PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 255 TPIGSLVITVSARDLDAGTHGELSYS 280
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S I E+
Sbjct: 303 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDILENS 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 361 P-ETVVAVFGISDPDSGNNGKM 381
>gi|402872846|ref|XP_003919618.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A5 [Papio
anubis]
Length = 812
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDPV-LSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSAENHIPLKVADVNDNPPNFPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
+ TL+ E + +E G G L+ + + V+D NDN P ++ + S+
Sbjct: 301 ISTLQPLDYEESRFYLMEVVAQDG---GALLASAKVVVTVQDVNDNAPEVILTSLTSSLS 357
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
ED GTV+ + S D D G N +++ +
Sbjct: 358 EDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|291395191|ref|XP_002714142.1| PREDICTED: cadherin 6, type 2 preproprotein-like [Oryctolagus
cuniculus]
Length = 790
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEYSITDGEGL 313
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + K P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAINRKTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + IIVED D P+F
Sbjct: 330 TVKKLLDFEKQ--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIIVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y + + ED V T + VSA D D N
Sbjct: 387 AYIVQVREDAQVNTTIGSVSAQDPDAARN 415
>gi|127138979|ref|NP_001076034.1| protocadherin gamma-B5 precursor [Pan troglodytes]
gi|62510860|sp|Q5DRA7.1|PCDGH_PANTR RecName: Full=Protocadherin gamma-B5; Short=PCDH-gamma-B5; Flags:
Precursor
Length = 923
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G NP PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGNP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|397517954|ref|XP_003829168.1| PREDICTED: protocadherin gamma-A5 [Pan paniscus]
Length = 813
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + +++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIHVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|410266130|gb|JAA21031.1| protocadherin gamma subfamily B, 5 [Pan troglodytes]
Length = 921
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G NP PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGNP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|297676253|ref|XP_002816048.1| PREDICTED: protocadherin gamma-A5 [Pongo abelii]
Length = 813
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIRVTVLDANDNAPLFTQSEYSVSVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P FP + YS S+PE+ P G + V+A D D G N++++++
Sbjct: 431 PLSTESHIPLKVADVNDNPPNFPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G TL+ E + +E G G LV + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDG---GALVASAKVVVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED G V+ + S D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGAVIALFSVHDGDSGENGEIACS 385
>gi|229442301|gb|AAI72919.1| cadherin EGF LAG seven-pass G-type receptor 1 [synthetic construct]
Length = 1713
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 422 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 480
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 481 VQATDRDQGQNAAIHYSILSGN 502
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 772 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 831
Query: 150 NGLFSSD 156
F D
Sbjct: 832 VPQFRID 838
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 317 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 373
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 374 TIRASDRDSPINANLRYRVL 393
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N
Sbjct: 973 RGS-PTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPN 1031
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 1032 AQIMYQIVEGDMRHFFQLDLLNGDLRA 1058
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 537 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 595
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 596 ENARLHYRLVDTASTF 611
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 880 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 929
>gi|431917275|gb|ELK16811.1| Cadherin-6 [Pteropus alecto]
Length = 790
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y + PE P GT + + ASDAD+G N+ ++++ E GL
Sbjct: 264 NPPRFPQSTYQFNTPESSPPGTPIGRMKASDADVGENAAVAYSLTEGEGL 313
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ K+ K + SNP GP + I+VED D PIF
Sbjct: 330 TVKKLLDFEKK--KLYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPIFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIKEDAQINTTIGSVTAQDPDAARN 415
>gi|403254095|ref|XP_003919814.1| PREDICTED: protocadherin-16 [Saimiri boliviensis boliviensis]
Length = 3297
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+IV D ND+ P FPV YS+ +PE
Sbjct: 1807 GTMRPLDREVEPAFQLKIEARDGGQPA-LSATLLVTVIVLDANDHAPAFPVPAYSVEVPE 1865
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 1866 DVPAGTLLLQLQAHDPDAGANGRVTY 1891
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2350 AHDGPHQGHANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2409
Query: 142 LSWNELEPNGLFSSD 156
+S++ P F+ D
Sbjct: 2410 ISYHLASPADGFTVD 2424
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L R EH L V + H GS P T T+ V D ND P F
Sbjct: 1592 RLHSSTGALSVVRPLDRERRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1648
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1649 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1685
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2595 NDNPPVFTQASYRVAVPEDTPVGAELLHVEASDADPGPHGLVHFAVSSGDPSGLFELD 2652
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 54 LYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
L +N GTL+ AL E H L V+ G++ TI V+D ND+ P FP
Sbjct: 2651 LDENSGTLRLAHALDCETQARHQLVVQAADPAGAH----FALAPVTIEVQDVNDHGPAFP 2706
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2707 LNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2746
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 867 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 926
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 927 RVTFTLLAGGG 937
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T + K TL+ R E+ + + +P P + + VED+N
Sbjct: 1689 SSESFSLDPDTGVLK---TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTVRVAVEDEN 1744
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1745 DHAPTFGSAHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1801
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ S+ P GT V V A D D G + +LS+
Sbjct: 662 GGLKSMVYVKVFLSDENDNPPQFYPREYATSLSAQSPPGTAVLRVRAHDPDQGSHGRLSY 721
Query: 145 NELEPN--GLFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 722 HILAGNSPALFALDEQSGLLTVAWPLARRAN 752
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + L R + E + + + +P LVG+ T++V D NDN P
Sbjct: 2219 FHVDPATGIITTTAILDREIWAETRLVLMATDR---GSPA-LVGSATLTVMVIDTNDNRP 2274
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P + L + ED +G+ + V+ +D D G + W L P+G
Sbjct: 2275 TIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYVLSPSG 2316
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P L + ++ ++D NDN P
Sbjct: 520 FSIDPTSGIITTAVSLDYELEPQPQLIVVAT---DGGLPS-LASSATVSVALQDVNDNEP 575
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 576 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 615
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2471 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2509
Score = 39.3 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L +PE GT + A DAD G
Sbjct: 121 PDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGTRYPLEPAHDADAG 172
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 210 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 265
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 266 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 307
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1535 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1581
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1065 ELYTLKVMAVSGSKAELGQQTGTATLRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1124
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1125 RVFATDRDSGPNGRLTYS 1142
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS GT + ++ D NDN+P
Sbjct: 1153 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPSRSTTGTVHVAVL--DLNDNSP 1208
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1209 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1264
>gi|395504772|ref|XP_003756721.1| PREDICTED: protocadherin gamma-A4-like [Sarcophilus harrisii]
Length = 826
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+R L EE H L + T G +P GT + + V D NDN P+F S YS+S+P
Sbjct: 196 LERTLDREEEPIHHLTL--TASDGGDP-VRSGTVHIHVTVLDANDNAPVFTQSLYSVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
EDVP+GT + V+A+D D G+N K+++
Sbjct: 253 EDVPLGTWLLTVNATDPDEGINGKMTY 279
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 40 TFSIAKFIANPTTRLYKNVGTL--KRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTII 96
T SI + + + Y N TL +AL E+ V T G +P PL + ++
Sbjct: 383 TCSIPEDLPFKLEKSYGNYFTLVTDKALDREQVSMYNVTVTATDGGSP-PLSTDTHISLH 441
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSS 155
+ED NDN P F ++ YS+ + E+ P GT + + A D D NS ++++ ++ L +S
Sbjct: 442 IEDINDNPPTFALTFYSVYVMENNPRGTSIYSLIARDPDNEENSHVTYSIVDDTVLGAS 500
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPV--SQYSLSI---PEDVPVGT 124
LK+ T NP PL + + + DQNDN+P ++PV S S + P G
Sbjct: 528 LKLRVTAKDSGNP-PLSSNVSLILFILDQNDNSPEILYPVFPSDGSTGVELAPRSAEPGY 586
Query: 125 VVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
+V V A D D G N+ LS+ ++ GLFS L
Sbjct: 587 LVTKVVAVDGDSGQNAWLSYRLIKATEPGLFSVGL 621
>gi|334311097|ref|XP_001377944.2| PREDICTED: protocadherin gamma-A12 [Monodelphis domestica]
Length = 894
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL EE H L + T G NP GT + V D NDN P+F S YS+SIP
Sbjct: 195 LERALDREEEPVHHLIL--TASDGGNP-VRSGTSRVRVTVLDANDNAPVFTQSVYSVSIP 251
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VPVGT + V+A+D D GVN +++++
Sbjct: 252 ENVPVGTWLLSVNATDPDEGVNGEVTYS 279
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQY 112
Y N +L ++ + + + N ++ G P+ + T+ V D NDN P F + Y
Sbjct: 397 YGNYYSLVTSMALDREQVSMYNITVTATDLGTPPISTNTHITLHVADINDNPPTFSQTSY 456
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
S+ I E+ P G+ + +V+ASD D N+++ +
Sbjct: 457 SVYILENNPKGSSIFLVTASDPDSEENAQIIY 488
>gi|403255750|ref|XP_003920574.1| PREDICTED: protocadherin gamma-A5 [Saimiri boliviensis boliviensis]
Length = 813
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + ++V D NDN P+F S+YS+++PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDP-VLSGTVHIRVMVLDANDNAPLFTRSEYSVTVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 86 PLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P + T N ++ V D NDN P F + YS S+PE+ P G + V A D D G N+++++
Sbjct: 430 PPLSTVNHILLKVADVNDNPPNFLQASYSTSLPENNPRGVSIFSVMAHDPDSGDNARITY 489
Query: 145 NELE 148
+ E
Sbjct: 490 SLAE 493
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G T++ E + +E G G L+ + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTIQSLDYEESRFYFMEVVAQDG---GALLASAKVLVTVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + S D D G N +++ +
Sbjct: 348 ILTSLTGSLSEDCLPGTVIALFSVHDDDSGENGEIACS 385
>gi|327273598|ref|XP_003221567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Anolis carolinensis]
Length = 2829
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P + + + + R +E H + N +G +PGP T I VED+NDN+P
Sbjct: 212 FEIDPHSGVVRTCAPVDREEVSEYHLVVEAN--DQGKDPGPRSATVTVHISVEDENDNSP 269
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
F +Y + IPED P+ V V A+D D G N+++ ++ + N
Sbjct: 270 QFSEKRYQVQIPEDTPINNQVLQVQATDRDRGSNAQVHYSIVSGN 314
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L T I V D N + P+F S Y++S+ ED PVGT + + A+D D G N+++++
Sbjct: 573 GTLFDTVQVHINVTDANTHRPVFQSSHYTVSVSEDKPVGTSIVTIVATDEDTGENARITY 632
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + + V D NDN P+F ++ + + E+ PVG++V +SA D D G N+++ +
Sbjct: 783 PLKASVDIQVTVLDINDNPPVFEQDEFDIYVEENSPVGSIVARISAVDPDEGTNAQIMYQ 842
Query: 146 ELEPN--GLFSSDL 157
+E N +F DL
Sbjct: 843 IVEGNIPEVFQLDL 856
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L+++ G P + + +I V D NDN PIF + + ++ E+VPVG V
Sbjct: 341 EYTLRIK--AQDGGRPPQINSSGMVSIQVLDVNDNAPIFVSTPFQATVLENVPVGYSVLH 398
Query: 129 VSASDADLGVNSKLSWNELE---PNGLFSS--DLRVEWVINRS 166
+ A DAD G N++L + +E P+ L ++ D+ + IN S
Sbjct: 399 IQAVDADSGDNARLEYKLIEVAHPSSLVATVGDMSFPFQINNS 441
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F N T + +L R + + H L+V T P T T+ V D ND+ P
Sbjct: 105 FSINAGTGVVTTTRSLDRETK-DTHVLQVTATDQGA--PRHRSATTFLTVTVSDTNDHGP 161
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN---GLFSSD 156
+F +Y +I E++ VG V + A+D D N+ L + LEP G+F D
Sbjct: 162 VFEQPEYRENIRENLEVGYEVLTIRATDKDAPDNANLLYRILEPGAGEGVFEID 215
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F +Y ++ EDVP+ T V VSA D D G N +L +
Sbjct: 686 ILILDANDNVPRFLRDRYQGAVFEDVPLSTSVLQVSAVDRDSGPNGRLLY 735
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + + +I V D NDN+P F Y L + ED VG+ V ++A D D VNS +++
Sbjct: 473 MTSSASVSITVLDVNDNSPTFTEKVYQLRLNEDAVVGSSVLTLTAVDKD--VNSVVTY 528
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2293 ETKEHFVLMITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKMYFTTIPEDAPTGTD 2350
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V +V+ASDAD N+ +S+ + N F+
Sbjct: 2351 VLLVNASDADASTNAVISYRIIGGNSQFT 2379
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L RAL E + + + + G T V D NDN P
Sbjct: 1857 FFLNPVTGVFN----LTRALDYEAQQYYILTVRAE--DGGGQFTTIRVYFNVLDVNDNPP 1910
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVI 163
IF ++ YS S+ E++P+G+ V V + +DAD G+NS+L+++ + G F+ D +
Sbjct: 1911 IFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKV 1970
Query: 164 NRSVDQHT 171
+S+D+ +
Sbjct: 1971 LKSLDRES 1978
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T+E++ V + GS P PL + + + V D NDN
Sbjct: 2376 SQFTINPSTGQIITSALLDR--ETKENYTLVVVSSDAGS-PEPLSSSASVLVTVTDVNDN 2432
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2433 PPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYS 2474
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ PG V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 VFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEGTNADIRY 287
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1797 ITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1856
Query: 153 F 153
F
Sbjct: 1857 F 1857
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GSNP T +I++ D ND P+F +S YS+++PE++
Sbjct: 2189 KTPTYSLTVQATD-RGSNP--RTDTSTVSIVLLDINDFVPMFELSPYSVNVPENLGTLPR 2245
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
T++QVV A D D G NSKLS+ NE L +S +L+V ++R +H
Sbjct: 2246 TILQVV-ARDDDQGPNSKLSYVLFGGNEDNAFTLSASGELQVTQSLDRETKEH 2297
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V V+A D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVNAIDKDFGPNGEVRYS 1138
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F +Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3146 GYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3201
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG+N
Sbjct: 665 GSPPQSSMARINVSLL--DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGLNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
++++ + KG NP PL IIV ++N + P F S S +IPE +G +V+
Sbjct: 3023 QNFVITVTARDKG-NP-PLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRT 3080
Query: 129 VSASDADLGVNSKLSWN 145
VSA D D +N + ++
Sbjct: 3081 VSARDRDAAMNGLIRYS 3097
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T + +II+ D NDN P F +S IPE+ P+ T+V A+D D G NS + +
Sbjct: 1999 FTSTAHVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYTL 2057
Query: 147 LEPNG 151
L P G
Sbjct: 2058 LNPLG 2062
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2825 STDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSATDPDEGSNGQVFYFIKSQ 2884
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2885 SEYFRINATTGEIFNKQVLKYQN 2907
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1696 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1745
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNP+F + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2102 LSSSTEVVVMVLDINDNNPVFVQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGI 2161
Query: 147 LEPNGLFSSDLRVEWV 162
++ N + + R++ V
Sbjct: 2162 VDGNA--NQEFRIDSV 2175
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND PIF ++ YS+ I E
Sbjct: 3329 GLLDRE-KEERVSLKVL-AKNSGSIRGADIDEVTVNVTVLDANDP-PIFSLNIYSVQISE 3385
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE-------PNGLFS 154
VP GT V VSA D+D S SW+ NG FS
Sbjct: 3386 GVPTGTHVTFVSAFDSD----SVPSWSRFSYFIGSGNENGAFS 3424
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNN 104
F N T +++ +L R + ++ L ++++ KGS P T II + D+NDN
Sbjct: 2686 FTINHATGEIRSIRSLDRE-KISQYVLTIKSSD-KGS---PSQSTSVKVIINILDENDNA 2740
Query: 105 PIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
P F SQ +S +PE+ P+G V V+ SD D+GVN+
Sbjct: 2741 PRF--SQIFSAYVPENSPLGYTVTRVTTSDEDIGVNA 2775
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNANISYLITTGDQKGMF 839
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 840 AINQVTGQLTTASVIDR 856
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P+F Y +++ E PV + V A D D G N +++++ E N
Sbjct: 983 TVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGN 1039
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P + + D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLRATDRDLGDNGTVRFSLQEAE 626
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2924 TSSDRGNPS-LLSETTVTINTVDSNDNAPQFLKGKYFTPVTKNVKVGTKLIKVTAVDDRD 2982
Query: 136 LGVNSKLSW 144
G+NS++ +
Sbjct: 2983 FGLNSEVEY 2991
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
>gi|351704549|gb|EHB07468.1| Cadherin-19 [Heterocephalus glaber]
Length = 717
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A F PTT + + + R L+ +E+W+ ++ G + G L GT + I + D NDN
Sbjct: 140 AYFSVEPTTGIIRVSSKMDRELQ-DEYWIIIQAKDMIGQH-GALSGTASVLIKLSDINDN 197
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PIF S Y L++ E P G + ++A D D+G N+++ +
Sbjct: 198 KPIFKDSFYRLTVSESAPAGKTIGKITAYDNDIGENAEMDY 238
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNP 105
I + T +Y N + L EE L + + + G V + +I V D NDN P
Sbjct: 37 IDDNTGDIYAN-----QKLDREEQSLYILRAQVIDTTTGRAVEPESEFVIRVLDINDNEP 91
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
F Y +PE P GT V V+ASDAD G N++L ++ L+ FS
Sbjct: 92 KFLDEPYEAMVPEMSPEGTFVIQVTASDADDPASGNNARLLYSLLQGQAYFS 143
>gi|311250359|ref|XP_003124075.1| PREDICTED: protocadherin gamma-A7-like [Sus scrofa]
Length = 882
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL EE H L + T G +P P GT + V D ND+ PIF QY +++P
Sbjct: 196 LERALDREEVAAHHLLL--TASDGGDP-PRSGTARVQVTVVDVNDHAPIFSSPQYQVTVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VPVGT + V+A D D GVN +++++
Sbjct: 253 ENVPVGTRLLTVNAVDLDEGVNGEVTYS 280
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 40 TFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIV 97
T +I++ + R N L A + V N K ++ G PL + +I V
Sbjct: 383 TCTISEDLPFKLERSIDNYYRLMTAKNLDRENFSVYNITLKATDGGSPPLSTETHVSIHV 442
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P F S YS+ +PE+ P GT + V+A D D N+++ ++
Sbjct: 443 ADTNDNPPTFLHSSYSVYVPENNPRGTSIFSVTAYDPDSNENARVVYS 490
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ + D ND+ P ++ S SIPED P GTV+ + D D G N +++ S
Sbjct: 335 VTILDVNDHAPEVTLTSVSSSIPEDTPPGTVIALFYLQDRDSGKNGQVTCT-------IS 387
Query: 155 SDLRVEWVINRSVDQH 170
DL + + RS+D +
Sbjct: 388 EDL--PFKLERSIDNY 401
>gi|395504768|ref|XP_003756719.1| PREDICTED: protocadherin gamma-A4-like [Sarcophilus harrisii]
Length = 1616
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSLSIP 117
L+RAL R EE ++ T G NP VG+ I+V D NDN P F SQYS+S+P
Sbjct: 196 LERALDREEEPIHRLILTAFDGGNP---VGSATVLILVTVVDANDNAPQFIQSQYSVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+VPV T + V+A+D D G+N +S+
Sbjct: 253 ENVPVKTCLLRVNATDPDEGINGDVSY 279
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 47 IANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+ +P+ YK + GTL R T E+ + V T KG NP PL + ++V D NDN
Sbjct: 1170 LESPSKNYYKLLTEGTLDRE-HTSEYNITVTATD-KG-NP-PLSTSKTVLLVVGDVNDNA 1225
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+F Y +PE+ P GT + VSA D DL N LS++
Sbjct: 1226 PVFLQKSYMAYVPENNPSGTSISCVSAVDPDLEKNGSLSYS 1266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT I V D NDN P+F Y +S+ E++P G+ + VSA+D D GVN++++++
Sbjct: 1000 GTAQIRINVVDANDNVPVFSQQVYRVSVRENLPPGSTILGVSATDQDEGVNAEITYS 1056
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ T++V D NDN PIF + +L I E + VG+ + A D D+G NS L LE N
Sbjct: 894 HVTVVVLDINDNPPIFKRAHANLKISESIQVGSSFPLDPAVDLDIGSNS-LQRYYLEQNS 952
Query: 152 LFSSDLRV----------EWVINRSVDQH 170
F DL V E V+ +S+D+
Sbjct: 953 YF--DLTVKQSPDGDKYPELVLKKSLDRE 979
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 55 YKNVGTL--KRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVS 110
Y N TL RAL E+ + + N ++ G PL + ++ +ED NDN+P+F +
Sbjct: 398 YGNYYTLVTDRALDREQ--VSMYNITVTATDRGSPPLSTGTHISLHIEDINDNHPVFVQT 455
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
S + E+ P GT + ++A D+D+G N ++++ ++
Sbjct: 456 SESTYVMENNPRGTSIYSLTAHDSDIGENGHVTYSIMD 493
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
+ V TL R ++ + ++ + G NP P+ G I V D NDN PIF S YS+S
Sbjct: 186 ETVATLDRE---QKEFYRLNISAEDGGNP-PMHGYLIVNITVLDTNDNPPIFDHSAYSVS 241
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHT 171
+ E +P G V V ASDAD G N+++S++ E N ++ S+DQHT
Sbjct: 242 MNESLPAGHRVLQVHASDADAGDNARISYSLAESNAKQANQF--------SIDQHT 289
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 88 VGTC--NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V +C N I V D NDN+P+F S +S IPED P G + V A+DAD+G N ++S++
Sbjct: 1823 VQSCETNVDITVLDTNDNSPVFSHSMFSFDIPEDTPRGHKIGSVRATDADIGQNGQVSYS 1882
Query: 146 ELEP--NGLFS 154
L N LFS
Sbjct: 1883 VLSDWGNDLFS 1893
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT + V D+NDN P+F Y + + E++P T + ++A+D+D G+N+ L +
Sbjct: 2352 LTGTGTLILSVSDRNDNAPVFEKPFYEIHVSENLPADTFIAKITATDSDQGLNALLRYTL 2411
Query: 147 LEPNGLFSSDLRVEWVI-NRSVDQH 170
EP+G F D + +I RS D+
Sbjct: 2412 KEPSGWFELDPQTGVLIAKRSFDRE 2436
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI + +N N P F + Y +S+ E+ PVG + + ASD D GVN +L+++ +E NG F
Sbjct: 3088 TIRITQENKNAPSFSSASYQISVAENEPVGNELLTIQASDPDEGVNGQLAFS-IEANGNF 3146
Query: 154 SSDLRVEWV-INRSVDQHTNK 173
+ D V +N S+D T +
Sbjct: 3147 AIDKHSGIVTLNESLDFETAQ 3167
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F P L + L R L++E + V + K PL T + V D+NDN+P
Sbjct: 2102 FSIGPVDGLLRVNSELDRELKSEYQIIVVAKDRGKP----PLSATTTIIVHVLDENDNSP 2157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSD 156
+F QY + E+ PV V VSA+D D+G + + ++ + +PN FS D
Sbjct: 2158 VFEQRQYEAVMSENSPVEKSVIKVSATDFDVGPSGLIRYSIVAGDPNHDFSID 2210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F NP T ++ TL L E+ H++ V + + G L T + V D NDN
Sbjct: 1892 FSLNPQTGVF----TLTSNLDYEQYQHYIFVVSAQDAGV--PSLSSTVTVYMNVIDFNDN 1945
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV---- 159
+P+F Y+ + ED P+ T V V ASD D G N ++S+ LE G R+
Sbjct: 1946 SPVFDPLSYTAEVREDAPLNTTVLSVHASDLDSGPNGEISYTILE--GDDDQQFRISENG 2003
Query: 160 EWVINRSVDQHT 171
+ R++D+ T
Sbjct: 2004 RIITTRALDRET 2015
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
GTC + V D+NDN+P F +S ++ ED +GT V +++ D+D+G N+ +++ E
Sbjct: 2767 GTCTVMVEVADKNDNSPRF-TRLFSANVSEDATIGTFVIQMTSIDSDIGQNAIATYSLNE 2825
Query: 149 -PNGLFSSD 156
P G F+ D
Sbjct: 2826 NPGGKFAID 2834
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQY-SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V T N +I+ D+NDN P+F S + S IPED +G + SA D DLG+N ++S++
Sbjct: 1294 VATLN--LIILDENDNFPVFNASTHESKEIPEDTEIGAEIYQFSAEDMDLGLNGEVSYS 1350
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 63 RAL--RTEEHWLKVENTKHKGSNPGP-LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
RAL T H+ + + + + +NP L +I+++D ND P F VS + SI E+
Sbjct: 2009 RALDRETRSHYNLIVSAEDRAANPRQRLSSIAQVSIVIQDVNDITPHF-VSPNTSSIVEN 2067
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+ T++ V A D D G NS + ++
Sbjct: 2068 APLNTIIMAVKAVDGDEGRNSHIEYS 2093
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
I V D ND+ P F S+YS+ + E V VG+ V VSA+D D GVN+
Sbjct: 449 IRVNDVNDHEPQFEKSEYSVVLSETVNVGSYVVAVSATDEDTGVNA 494
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 11 EYNHWSISKLLESRYLHL-----RPKSG--------MYAPAFTFSIAKFIANPTTRLYKN 57
EY + K + Y+ L R K G + P+ +F + N TT+
Sbjct: 2889 EYTFYLAEKQVIQSYVGLIQAIDRDKEGRNSRISYFLKRPSESFHVDSMSGNITTKRTFT 2948
Query: 58 VGTLKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSL 114
+R L E H L++ T + G T TT+IV D N N P+F Y +
Sbjct: 2949 YRKSRRGLSPENIHTLQIVATDY-----GKPALTGETTVIVNIMDSNSNAPVFVEKSYFV 3003
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG--LFSSDLRVEWV 162
+PE + VGT + V A+ D +++++ ++ NG L D W+
Sbjct: 3004 PVPESLSVGTSLIQVEATSKDEHLDAEVQFHVAGGNGTDLIELDAHTGWI 3053
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF +P + G+L R L+ +E+ LKV PL TI V D NDN
Sbjct: 2829 GKFAIDPVSGNVTVAGSLDRELK-DEYNLKVTVFDGAWKKDTPL------TITVTDVNDN 2881
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL-GVNSKLSWNELEPNGLFSSD 156
+P F ++Y+ + E + + V ++ A D D G NS++S+ P+ F D
Sbjct: 2882 SPQFGKTEYTFYLAEKQVIQSYVGLIQAIDRDKEGRNSRISYFLKRPSESFHVD 2935
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 46 FIANPTTRLYKNVGTLKRA--LRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
F +P + + +++ + R + T H ++ VE + NP L + V D+ND
Sbjct: 1144 FAVDPRSGVIRSLKSFDREKLVETMSHDYITVEASVSDNGNPR-LKSETRIVVHVLDEND 1202
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N P+F Y I E P T + VSA+D D G N + +
Sbjct: 1203 NPPVFSRKVYKSPISESTPANTQIARVSATDPDDGPNGMIVY 1244
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF+ + T + + L R L+ E + + + T P + I V D+ND
Sbjct: 1681 KFVVDIKTGVIETATPLDRELQPEPYEVIIYATDRNARTP--MTAKTKAIIRVSDRNDTP 1738
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
P F Y++ I ED T + V A D DL
Sbjct: 1739 PRFTGVPYAIRISEDAATSTTILTVHAEDPDL 1770
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T N + + D NDN P F ++ IPE +G V V A+D D G N+++ ++ +P
Sbjct: 865 TYNVAVEITDINDNAPYFERPFVTIRIPESFAIGLDVFVSQANDLDEGPNAQILYSLEDP 924
Query: 150 NGLFSSDLRVEWV 162
LF D V V
Sbjct: 925 EDLFFIDEHVGVV 937
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P+FP ++ E + T+V V A+D DL NSK+S++
Sbjct: 1409 DVNDNAPVFPNGAIVRTVREGIASDTMVASVVATDRDLKQNSKISYS 1455
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
K+ GS G I+++D ND P+F S Y + +PEDV + V VSA+D D+
Sbjct: 3384 KNGGSIRGNDTDEAQVVILIQDGNDP-PVFSKSLYEVKVPEDVDLDHYVVTVSATDRDV 3441
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T N ++ V D NDN PI S Y + + G V ASDAD GVN+++ ++
Sbjct: 654 LSSTVNVSVHVADVNDNRPILYPSIYFHQVRSGIKPGAFSTRVYASDADEGVNARIVFS 712
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-----NELEP 149
I +ED ND+ P F + Y +S+ E PV + A+D D+G N ++++ NE +
Sbjct: 981 IEIEDVNDHTPFFDHTSYEISLAELTPVNERFFSLYAADDDVGENGQVTYSITGGNEEQK 1040
Query: 150 NGLF 153
G+F
Sbjct: 1041 FGIF 1044
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130
W++ EN K L + V+D NDN+P+ + +++++ E+ V V
Sbjct: 2650 WIQAENINSK------LSAATELQVRVQDVNDNSPMCSQAVFNVTVMEEQAPPEFVAQVH 2703
Query: 131 ASDADLGVNSKL--SWNELEPNGLFSSDLRVEWVINRS-VDQHT 171
A+DAD G N + + + LFS + V RS +D+ T
Sbjct: 2704 ATDADEGTNGDVFYQFESVAETSLFSIESDTGKVFTRSKLDRET 2747
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPED 119
+K AL E H V + + P + TI + D NDN P F P SI E+
Sbjct: 1051 VKEALDHEHHDFYVLVVTARDNGARPRSSSVPLTIHIIDDNDNVPRFVPNGNLVFSIVEN 1110
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
+ V ++ A DAD G N++L++ F+ D R
Sbjct: 1111 QEPDSFVGILVAEDADSGRNAELTYALSSDQTDFAVDPR 1149
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++++D NDN P F S YS+ + E G V A DAD+G+NS + ++ P+ F
Sbjct: 2464 VLIDDVNDNAPEFHRSIYSIKVDETGVEGGFVFGGQAHDADIGLNSMVEYSLSGPDVDF 2522
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T++ R E+ ++++ H G P I ++D+ND P F ++ ++++
Sbjct: 518 VTTVEILNREEQDLVELKIYAHDG-GPNRKFAYTTLKIHIQDENDEAPAFVMNHLNVTLS 576
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ +V ++A+D DLG N +S+
Sbjct: 577 ENATPHALVTQITATDNDLGPNGTVSY 603
>gi|355709588|gb|AES03641.1| protocadherin gamma subfamily B, 5 isoform 1 precursor [Mustela
putorius furo]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + KR R ++ + ++ T G +P PL GT I V D NDN+P+F Y +
Sbjct: 14 YPELALEKRLDREQQSYYRLVLTALDGGDP-PLSGTTELRIQVTDANDNSPVFKQDIYRV 72
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNS 140
S+ E+VP GT V VSA+D D G+NS
Sbjct: 73 SLRENVPPGTAVIQVSATDQDEGINS 98
>gi|355563775|gb|EHH20337.1| hypothetical protein EGK_03169, partial [Macaca mulatta]
Length = 2846
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 256 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 314
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 315 VQATDRDQGQNAAIHYSILSGN 336
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 606 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 665
Query: 150 NGLFSSD 156
F D
Sbjct: 666 VPQFRID 672
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 151 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 207
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D VN+ L + L
Sbjct: 208 TIRASDRDSPVNANLRYRVL 227
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N
Sbjct: 807 RGS-PTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPN 865
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 866 AQIMYQIVEGDMRHFFQLDLLNGDLRA 892
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 371 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 429
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 430 ENARLHYRLVDTASAF 445
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 714 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 763
>gi|351696447|gb|EHA99365.1| Protocadherin gamma-A7 [Heterocephalus glaber]
Length = 895
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE + T + G +P PL GT + V D ND+ P+F + QY +++PE VP+GT
Sbjct: 272 REEEMIHHLVLTAYDGGDP-PLSGTTRIQVTVVDVNDHTPVFSLPQYQVTVPESVPIGTR 330
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ ++A D D GVN +++++
Sbjct: 331 LLTINAVDLDEGVNGEVTYS 350
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ V D NDN PIFP S YS+ +PE+ P G + V+A D D N++++++
Sbjct: 509 SMYVADTNDNPPIFPQSSYSVYVPENNPRGASIFSVTAHDPDSEKNAQVTYS 560
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ + + ++E G PG L II+ D NDN P V+ S
Sbjct: 367 LTGELSTLEGLDYEDSSFYEMEVQAQDG--PGSL-AKAKVLIIILDVNDNAPEVTVTSVS 423
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P GTV+ ++ D D G N +++
Sbjct: 424 NSIPEDTPPGTVIALLYLQDKDSGKNGEVTC 454
>gi|444713195|gb|ELW54103.1| Protocadherin gamma-A7 [Tupaia chinensis]
Length = 1389
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T + G +P P GT + +IV D ND+ P+F QY +IPE+
Sbjct: 761 LERVLDREEEMVHHLVLTAYDGGSP-PRSGTAHIQVIVVDVNDHAPVFSQPQYQATIPEN 819
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V+A D D G+N +++++
Sbjct: 820 VPVGTRLLTVNAVDLDEGINGEVTYS 845
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 49 NPTTRLYKNVGTLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTI--IVEDQNDN 103
NP Y + LK L EE H L + T G P +C T I IV D NDN
Sbjct: 184 NPDGSRYPEL-VLKAPLDREEQSTHHLVL--TALDGGEPS---RSCTTQIRIIVADANDN 237
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y +S+ E++P G+ V + A+D D GVN+++++
Sbjct: 238 PPVFTQDTYRVSVSENLPPGSSVLTLIATDPDEGVNAEVTY 278
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVS 110
R N L A + L + N K ++ G PL + ++ V D NDN P F S
Sbjct: 961 RSIDNYYRLVTAKNLDREKLSLYNITLKATDGGSPPLSTEIHISMHVADTNDNPPAFTHS 1020
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
YS+ +PE+ P G + V+A D D N++++++
Sbjct: 1021 SYSIYVPENNPRGASIFSVTAQDPDSDENAQVTYS 1055
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E G PG L I V D NDN P ++ S SIPED P GTV+
Sbjct: 876 ESSFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTITSVSSSIPEDTPPGTVIA 932
Query: 128 VVSASDADLGVNSKLSW 144
+ D D G N +++
Sbjct: 933 LFYLQDRDSGKNGEVTC 949
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
C I V D+NDN P ++ S I ED GTVV ++ D D GVN ++
Sbjct: 330 CKIQIDVLDENDNAPEITLASESQHIQEDALPGTVVALIKIYDLDSGVNGEI 381
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
PL + T+ + D NDN P+F + Y + +PE+ P G + VSA D D
Sbjct: 430 PLSSSRTITLHIADVNDNAPVFQQASYLVHVPENNPPGASLAQVSAFDPD 479
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ T++++D NDN P F + L I E GT + A D D+GVNS L L P+
Sbjct: 117 HVTVLIQDINDNPPTFNQNITELEISELALTGTTFALEPAQDLDVGVNS-LQQYHLSPHP 175
Query: 152 LFS 154
FS
Sbjct: 176 RFS 178
>gi|149640366|ref|XP_001507464.1| PREDICTED: protocadherin beta-16-like [Ornithorhynchus anatinus]
Length = 796
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R ++ + + T G +P P GT +++ D NDN P+F S+Y + IPE+
Sbjct: 196 LDKALDREQQDEIHLTITAMDGGSP-PRSGTAEVHVLIVDINDNAPVFTQSRYEVQIPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P G++V V+A D D G+N ++S++
Sbjct: 255 SPAGSLVSTVTAKDFDAGINGEISYS 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
T I V D ND++P+F + L+IPE+ PVGT Q+ SA D D+G NS L + PN
Sbjct: 119 TEIAVGDINDHSPVFLDKEMILNIPENSPVGTEFQMESAQDLDVGNNS-LQEYTISPNSY 177
Query: 153 FSSDLRV--------EWVINRSVDQH 170
F + R+ E V+++++D+
Sbjct: 178 FHINTRIHSGGRKFPELVLDKALDRE 203
>gi|149726254|ref|XP_001504074.1| PREDICTED: protocadherin gamma-A5 [Equus caballus]
Length = 814
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + I+V D NDN P+F S+Y +S+PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDP-ILSGTTHIRIMVLDANDNAPLFTQSEYRVSVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + ++ V D NDN PIFP ++YS IPE+ P G + V+A D D G N+++
Sbjct: 429 NP-PLSTENHISLKVADINDNPPIFPQTRYSTYIPENNPRGISIFSVTAHDPDSGSNAQV 487
Query: 143 SWN 145
+++
Sbjct: 488 TYS 490
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
T +L N+G + + + + + G L+ + + V+D NDN P ++
Sbjct: 291 TFQLDSNLGEISTVQSLDYEEFRFYVMEVVAQDGGALLASAKVLVTVQDVNDNVPEVILT 350
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ S+PED GTV+ + S D D G N +++ +
Sbjct: 351 SLTSSVPEDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|119593835|gb|EAW73429.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_b [Homo sapiens]
Length = 3019
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 422 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 480
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 481 VQATDRDQGQNAAIHYSILSGN 502
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 772 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 831
Query: 150 NGLFSSD 156
F D
Sbjct: 832 VPQFRID 838
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 975 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 1034
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L + DLR
Sbjct: 1035 MYQIVEGDMRHFFQLDLLNGDLRA 1058
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 317 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 373
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 374 TIRASDRDSPINANLRYRVL 393
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 537 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 595
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 596 ENARLHYRLVDTASTF 611
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 880 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 929
>gi|7656967|ref|NP_055061.1| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Homo
sapiens]
gi|22095551|sp|Q9NYQ6.1|CELR1_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1;
AltName: Full=Cadherin family member 9; AltName:
Full=Flamingo homolog 2; Short=hFmi2; Flags: Precursor
gi|7407148|gb|AAF61930.1|AF231024_1 protocadherin Flamingo 2 [Homo sapiens]
Length = 3014
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 422 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 480
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 481 VQATDRDQGQNAAIHYSILSGN 502
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 772 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 831
Query: 150 NGLFSSD 156
F D
Sbjct: 832 VPQFRID 838
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 317 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 373
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 374 TIRASDRDSPINANLRYRVL 393
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 975 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 1034
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L + DLR
Sbjct: 1035 MYQIVEGDMRHFFQLDLLNGDLRA 1058
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 537 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 595
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 596 ENARLHYRLVDTASTF 611
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 880 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 929
>gi|119593834|gb|EAW73428.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_a [Homo sapiens]
Length = 3014
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 422 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 480
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 481 VQATDRDQGQNAAIHYSILSGN 502
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 772 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 831
Query: 150 NGLFSSD 156
F D
Sbjct: 832 VPQFRID 838
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 975 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 1034
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L + DLR
Sbjct: 1035 MYQIVEGDMRHFFQLDLLNGDLRA 1058
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 317 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 373
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 374 TIRASDRDSPINANLRYRVL 393
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 537 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 595
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 596 ENARLHYRLVDTASTF 611
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 880 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 929
>gi|26335563|dbj|BAC31482.1| unnamed protein product [Mus musculus]
Length = 796
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + T G NP L T + ++ V D NDN P+F S+Y +S+PE+ PVGT
Sbjct: 202 REKESAHDLVLTALDGGNP-VLSSTVHISVTVLDANDNAPLFTQSEYRVSVPENTPVGTR 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ ++A+DAD G+N+KL+++
Sbjct: 261 LLTLTATDADEGINAKLTFS 280
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESRFYLMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED GT++ + S DAD G N ++S +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEISCS 385
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F YS SI E+ P G + V A DAD G N++++++
Sbjct: 431 PLSTENHISLKVADINDNPPTFSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|348514367|ref|XP_003444712.1| PREDICTED: protocadherin gamma-B7-like [Oreochromis niloticus]
Length = 1225
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L R L R E+ + + T G NP P GT I V D NDN P+F + Y S+PE+
Sbjct: 194 LDRELDREEQQDVVLLLTAVDGGNP-PKSGTAVIKITVLDANDNAPVFTHTIYEASLPEN 252
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+ TVV VSA+DAD GVN ++++
Sbjct: 253 SPIDTVVATVSATDADEGVNGEVTY 277
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R ++ L + G P GT + V D NDN P+F + Y S+PE+ P
Sbjct: 684 KELDREQKQELAIVLVATDGGTP-QRSGTAVIHVSVLDANDNAPVFSQAVYEASLPENSP 742
Query: 122 VGTVVQVVSASDADLGVNSKLSW 144
+ VV VSA+DAD GVN ++++
Sbjct: 743 LDIVVITVSATDADEGVNGEVTY 765
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
LV +C I + D NDN PI + +PE+ P+GT V +V+ D D N ++ +
Sbjct: 813 LVSSCTLIIDITDVNDNAPITTIKSLKNPVPENSPLGTEVGIVNVQDRDSESNGQVRF 870
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
I + D NDN P+ +S S IPE + G V ++ DAD G N ++
Sbjct: 333 IDITDVNDNAPVIHISSLSNRIPESISSGAEVGIIHVQDADSGENQQV 380
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+F L I E P G+ ++ +A DAD+G N+ ++ L+ N F+ +
Sbjct: 121 IQDVNDNPPVFVKDVVKLDIGELAPKGSRYRINAARDADIGQNAVQNY-ILQRNNYFALN 179
Query: 157 LRV--------EWVINRSVDQHTNK 173
+ E V++R +D+ +
Sbjct: 180 VLTNAVGTKYSELVLDRELDREEQQ 204
>gi|348582912|ref|XP_003477220.1| PREDICTED: protocadherin gamma-A2-like [Cavia porcellus]
Length = 824
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE + G NP GTC + V D NDN P+F +Y +S+PE++PVGT
Sbjct: 202 REEEAVHHLILVASDGGNP-VRSGTCRIRVRVLDVNDNAPVFTQPEYRVSVPENMPVGTR 260
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
V V+A+DAD G N+++++ +P G
Sbjct: 261 VLTVTATDADEGYNAQVAYIREKPLG 286
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G NS L EL N FS D
Sbjct: 123 ITDINDNAPRFGVDELELKISEMTTPGFRIPLKSAHDADVGENS-LQQYELNSNDHFSLD 181
Query: 157 LR 158
+R
Sbjct: 182 MR 183
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ + V D NDN P F ++ + S+
Sbjct: 302 TIIKSLDYEDAKFHEIDIEAQDGPG-----LLTRTKVVVTVLDVNDNAPEFYMTSATSSV 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
PED P GT++ + + D D G N+ ++ E ++ + + RSVD +
Sbjct: 357 PEDSPPGTIIALFNVHDRDSGQNAFITCFLPE---------KLPFKLERSVDSY 401
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R + + + T G NP L + + V D NDN P F + YS IPE+ P G
Sbjct: 412 REQFSFYNITVTAEDGGNPS-LSTDAHVFLQVTDINDNPPAFSRAFYSAFIPENNPRGAS 470
Query: 126 VQVVSASDADLGVNSKLSWNELE 148
+ V A D D N+ ++++ E
Sbjct: 471 IFSVLAHDPDSDDNAHVTYSLAE 493
>gi|449268810|gb|EMC79648.1| Cadherin-10 [Columba livia]
Length = 789
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP S L +PE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRVPESSPVGTAIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V A+DAD G N+++ + ++ +G
Sbjct: 291 VKATDADTGKNAEVEYRIIDGDG 313
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D PIF S Y + ED+ +GT++ V A D D
Sbjct: 363 GPFKDTTIVKISVEDV-DEPPIFSRSSYLFEVHEDIELGTIIGTVMARDPD 412
>gi|395817385|ref|XP_003782152.1| PREDICTED: protocadherin gamma-A7 [Otolemur garnettii]
Length = 817
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T + G +P P GT + V D ND+ P+F + QY +++PE+
Sbjct: 196 LERMLDREEEKVHHLVLTAYDGGDP-PRSGTARIQVTVLDVNDHAPVFSLPQYQVTVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V+A D D GVN +++++
Sbjct: 255 VPVGTKLLTVNAVDLDEGVNGEVTYS 280
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVS 110
R N L A + L V N + ++ G PL + ++ V D NDN P FP S
Sbjct: 396 RSIDNYYRLMTAKSLDREKLSVYNITLQATDGGTPPLSTETHISMHVADTNDNPPTFPHS 455
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
YS+ PE+ P GT + +V+A D D N++++++ +E
Sbjct: 456 SYSVYFPENNPRGTSIFLVTAQDPDSDENAEITYSLVE 493
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E GS+ + I + D NDN P V+ S
Sbjct: 297 LTGELSTLEELDYEESGFYEMEVQAQDGSSS---LTKVKVLITILDVNDNAPEVTVTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+IPED P GTV+ + D D G N +++
Sbjct: 354 GTIPEDKPPGTVIALFYVQDRDSGKNGEVTC 384
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSI-----PEDVPVGT 124
L++ T H NP PL + ++ V DQNDN P ++P S P G
Sbjct: 528 LQLIVTAHDSGNP-PLSSNVSLSLFVLDQNDNAPEILYPAIPTDGSTGVELAPRSAEPGY 586
Query: 125 VVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
+V V A D D G N+ LS+ L+ + GLFS L
Sbjct: 587 LVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGL 621
>gi|326673395|ref|XP_002664335.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 804
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 60 TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL++ L R ++ L + T G +P P+ G IIV D NDN P+F + Y ++ E
Sbjct: 190 TLQKPLDREKQEHLSLTLTAIDGGDP-PMSGNIQINIIVLDANDNAPVFSQTVYKTAVTE 248
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
+ P GT+V VSASD D GVN +++++
Sbjct: 249 NSPKGTIVTTVSASDLDQGVNGEITYS 275
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G +C + V D NDN P+ + + I E+ P TVV +++ DAD G N
Sbjct: 315 QASDHGGFTDSCKIIVDVIDVNDNKPVINIMSKTNVIAENSPSETVVTMINVQDADSGEN 374
Query: 140 SKL--SWNELEPNGLFSSD 156
K+ S NE P L S++
Sbjct: 375 GKVQCSVNENIPFSLKSTN 393
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPEDVP----VGTVVQVVSAS 132
G +P PL + I+++DQNDN P ++PV + + E VP VG +V V A
Sbjct: 530 QDGGSP-PLSSNASVKILIQDQNDNAPQVLYPVQSGASVVAEIVPRSADVGYLVTKVVAV 588
Query: 133 DADLGVNSKLSW 144
D D G N+ LS+
Sbjct: 589 DVDSGQNAWLSY 600
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D NDN P+F S Y S+ E+ G + V A DAD N+++S+
Sbjct: 437 ISDVNDNAPVFEQSSYQASVQENNTPGLSIFTVRARDADFNQNARVSY 484
>gi|18087761|ref|NP_291066.1| protocadherin gamma-A5 precursor [Mus musculus]
gi|13876336|gb|AAK26088.1| protocadherin gamma A5 [Mus musculus]
gi|34785777|gb|AAH57404.1| Protocadherin gamma subfamily A, 5 [Mus musculus]
gi|148678193|gb|EDL10140.1| mCG133388, isoform CRA_w [Mus musculus]
Length = 932
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L T + ++ V D NDN P+F S+Y +S+PE+ PVGT + ++A+DAD
Sbjct: 213 TALDGGNP-VLSSTVHISVTVLDANDNAPLFTQSEYRVSVPENTPVGTRLLTLTATDADE 271
Query: 137 GVNSKLSWN 145
G+N+KL+++
Sbjct: 272 GINAKLTFS 280
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESRFYLMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED GT++ + S DAD G N ++S +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEISCS 385
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F YS SI E+ P G + V A DAD G N++++++
Sbjct: 431 PLSTENHISLKVADINDNPPTFSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|12652559|gb|AAH00019.1| CDH6 protein [Homo sapiens]
gi|119631170|gb|EAX10765.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_c [Homo
sapiens]
Length = 663
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPYVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|395504708|ref|XP_003756689.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 784
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R ++ L + T G +P GT I V D NDN P+F QY + IPE+
Sbjct: 196 LEKALDREKQPELTLTITAMDGGSPVK-SGTAQVQITVVDINDNTPVFAKPQYEVQIPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV-----INRSVD 168
PVG+++ VSA D D G+ +++ +P S V+ V + R VD
Sbjct: 255 SPVGSLIVTVSAEDLDAGIYGDITYTLFQPTAKVSQTFGVDPVSGDIRLKREVD 308
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T+I+ D NDN P+F + Y+L + E+ + VSASD D G N+K++++ L
Sbjct: 436 NITVIISDINDNPPVFNQTSYTLYLQENNSPALYIGSVSASDRDTGANAKITYSLL 491
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LF-- 153
VED ND++P F + L I E P+GT + A D D+G N ++ + PNG LF
Sbjct: 123 VEDINDHSPTFLDMKTFLKISESTPLGTTFPLTIAQDMDVGKNGLQNYT-ISPNGYLFLR 181
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+ +++D+
Sbjct: 182 TVTYSDGRKYPELVLEKALDRE 203
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 32 SGMYAPAFTFSIAKFIANPTTRLYKNVGT--------LKRALRTEEHWLKVENTKHKGSN 83
+G+Y I + PT ++ + G LKR + EE ++ + + +
Sbjct: 271 AGIYG-----DITYTLFQPTAKVSQTFGVDPVSGDIRLKREVDFEE--IQTYDLHIEAID 323
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
G L CN + V D NDN P +S ++ +IPE+ TVV V S D D N +++
Sbjct: 324 GGGLSTKCNVLVHVTDLNDNPPELTMSSFTSNIPEN-SSETVVAVFSIRDRDSRDNGRMT 382
Query: 144 WN 145
+
Sbjct: 383 CS 384
>gi|26335715|dbj|BAC31558.1| unnamed protein product [Mus musculus]
Length = 932
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L T + ++ V D NDN P+F S+Y +S+PE+ PVGT + ++A+DAD
Sbjct: 213 TALDGGNP-VLSSTVHISVTVLDANDNAPLFTQSEYRVSVPENTPVGTRLLTLTATDADE 271
Query: 137 GVNSKLSWN 145
G+N+KL+++
Sbjct: 272 GINAKLTFS 280
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESRFYLMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED GT++ + S DAD G N ++S +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEISCS 385
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F YS SI E+ P G + V A DAD G N++++++
Sbjct: 431 PLSTENHISLKVADINDNPPTFSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|397482525|ref|XP_003812473.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Pan
paniscus]
Length = 2821
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 282 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 340
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 341 VQATDRDQGQNAAIHYSILSGN 362
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 632 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 691
Query: 150 NGLFSSD 156
F D
Sbjct: 692 VPQFRID 698
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 177 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 233
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 234 TIRASDRDSPINANLRYRVL 253
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + D NDN P+F + L + E+ PVG+VV + A D D G N
Sbjct: 833 RGS-PTPLSTSVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAHDPDEGPN 891
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 892 AQIMYQIVEGDMRHFFQLDLLNGDLRA 918
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 397 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 455
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 456 ENARLHYRLVDTASAF 471
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 740 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 789
>gi|426394875|ref|XP_004063710.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Gorilla
gorilla gorilla]
Length = 3010
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 423 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 481
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 482 VQATDRDQGQNAAIHYSILSGN 503
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 773 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 832
Query: 150 NGLFSSD 156
F D
Sbjct: 833 VPQFRID 839
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 976 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 1035
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L S DLR
Sbjct: 1036 MYQIVEGDMRHFFQLDLLSGDLRA 1059
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 318 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 374
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 375 TIRASDRDSPINANLRYRVL 394
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 538 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 596
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 597 ENARLHYRLVDTASAF 612
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 881 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 930
>gi|426231039|ref|XP_004009556.1| PREDICTED: protocadherin beta-8 [Ovis aries]
Length = 771
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE L++ T G +P P GT + I V D NDN P F Y + IPED P G +
Sbjct: 202 REEEAELRLTLTAQDGGSP-PRSGTAHVYIEVVDINDNAPEFEQPFYRVKIPEDSPKGFL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D+GVN ++S++
Sbjct: 261 VVKVSATDVDIGVNGEISYS 280
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+PG L G C + V D NDN P +S ++ IPE+ P TVV V S SD D N
Sbjct: 320 EASDPGSLSGKCTVLVQVVDVNDNAPEVTMSAFTGQIPENSP-ETVVAVFSVSDLDSEEN 378
Query: 140 SKLSWN 145
K+S +
Sbjct: 379 GKVSCS 384
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYSLL 491
>gi|410039500|ref|XP_001158019.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 isoform 2 [Pan
troglodytes]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|403290283|ref|XP_003936252.1| PREDICTED: cadherin-6 [Saimiri boliviensis boliviensis]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDAD 135
Y L I ED + T + V+A D D
Sbjct: 387 AYILQIREDAQINTTIGSVAAQDPD 411
>gi|449512576|ref|XP_002199124.2| PREDICTED: protocadherin gamma-C3-like, partial [Taeniopygia
guttata]
Length = 772
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R E L++ T G +P P GT I V D NDN P+F +Y +S+ ED
Sbjct: 117 LRRALDRESEPSLRLLLTALDGGDP-PRTGTAQLWINVTDANDNPPVFAQDRYRVSLRED 175
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P G+ V +SASDAD G N+ +++
Sbjct: 176 TPPGSTVLNISASDADAGTNAHITY 200
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQ 100
F PT L K +R T + L E+T+ + + G LV C + V D
Sbjct: 202 FGKMPTKVLQKFTVDAQRGTITLQEELDFEDTRGYTLLVEARDGGGLVAHCKVELEVLDV 261
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NDN P V S +PED PVG VV ++ +D D G N + W
Sbjct: 262 NDNAPEITVLSLSNPLPEDAPVGAVVALLYVNDPDSGENGQGVW 305
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+T + + D NDN P F I E P G V A DAD+G NS L ELE NG
Sbjct: 39 HTQVDIHDVNDNAPRFLKDNIHFEIIESTPPGARFTVGVAEDADVGSNS-LQGYELETNG 97
Query: 152 LFSSDLR--------VEWVINRSVDQHT 171
F+ +++ E V+ R++D+ +
Sbjct: 98 YFAVEVKESQDGSKFAELVLRRALDRES 125
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 86 PLVGTCNTTIIVEDQNDNNP--IFP----VSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL + ++ V D NDN P ++P + Y+ + P G +V V A DAD G N
Sbjct: 479 PLATNVSVSVFVTDLNDNAPMVLYPQPNTTAAYTDVVAPGTPAGHMVTKVVAVDADAGYN 538
Query: 140 SKLSWNELEPN--GLFSSDL 157
+ +S+ L+ LFS L
Sbjct: 539 AWISYTLLQATDPSLFSVGL 558
>gi|351696445|gb|EHA99363.1| Protocadherin gamma-A2 [Heterocephalus glaber]
Length = 1532
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GTC + V D NDN PIF +Y +S+PE++PVGT + VSA+DAD G N+++++
Sbjct: 224 GTCRIRVKVLDGNDNAPIFTQPEYRVSVPENMPVGTRILTVSATDADEGYNAQVAY 279
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+ H + +E G L+ ++V D NDN P F ++ + S+PED P GTV+
Sbjct: 312 TKIHEIDIEAQDGPG-----LLTRTKMVVMVLDVNDNAPEFYMTSATSSVPEDSPPGTVI 366
Query: 127 QVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
+ + D D G N+ ++ + E ++ + + RSVD +
Sbjct: 367 ALFNVHDRDFGKNAFVTCSLPE---------KLPFKLERSVDNY 401
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G NS L EL N FS D
Sbjct: 123 ITDINDNAPRFGVDELELKISETTTPGFRIPLKSAHDADIGENS-LQKYELNSNDHFSLD 181
Query: 157 LR 158
+R
Sbjct: 182 VR 183
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R + + + T G NP L + + V D NDN P FP + YS IPE+ P G
Sbjct: 412 REQFSFYNITITAEDGGNPS-LSTDAHVLLQVADINDNPPAFPHAFYSAFIPENNPRGAS 470
Query: 126 VQVVSASDADLGVNSKLSWNELE 148
+ V A D D N+ ++++ E
Sbjct: 471 IFSVLAHDPDSDNNAHVTYSLAE 493
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 53 RLYKNVGTLKRAL------RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
RL K G R L R E + T P PL + ++ V D NDN P
Sbjct: 956 RLEKTYGNYHRLLIHRTLDREEVFKYNITVTATDQGTP-PLSTETHISLQVVDINDNPPT 1014
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
F + YS I E+ P G + ++A D D G N+++ ++ E
Sbjct: 1015 FTHASYSAYIQENNPRGASILSITAQDPDSGENAQVIYSLTE 1056
>gi|332259108|ref|XP_003278631.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Nomascus leucogenys]
Length = 2923
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 317 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 375
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 376 VQATDRDQGQNAAIHYSILSGN 397
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 667 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 726
Query: 150 NGLFSSD 156
F D
Sbjct: 727 VPQFRID 733
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 212 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 268
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 269 TIRASDRDSPINANLRYRVL 288
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N
Sbjct: 868 RGS-PTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIHANDPDEGPN 926
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 927 AQIMYQIVEGDMRHFFQLDLLNGDLRA 953
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 432 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 490
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 491 ENARLHYRLVDTASAF 506
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 775 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 824
>gi|441596423|ref|XP_004092928.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Nomascus
leucogenys]
Length = 804
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
PVG +V VSA+D D GVN ++S++ + + S V+++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFNVDFL 298
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENQ 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPTFTQTSYTLFVRENNSPSLHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|355691239|gb|EHH26424.1| Kidney cadherin [Macaca mulatta]
gi|355749842|gb|EHH54180.1| Kidney cadherin [Macaca fascicularis]
gi|380808526|gb|AFE76138.1| cadherin-6 preproprotein [Macaca mulatta]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|354473666|ref|XP_003499054.1| PREDICTED: cadherin-8-like isoform 3 [Cricetulus griseus]
Length = 711
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT + + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|296194856|ref|XP_002745137.1| PREDICTED: cadherin-6 isoform 2 [Callithrix jacchus]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDAD 135
Y L I ED + T + V+A D D
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPD 411
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL GTC T+ V D NDN P+F S + +I ED P GT V +V++SDAD+G N +S +
Sbjct: 2811 PLSGTCTVTVSVSDVNDNAPVFTASSFHTTITEDAPTGTDVLLVNSSDADVGNNGVISLS 2870
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V+D ND++P F + YS IPED+ G++V + ASD+D G+N +++++
Sbjct: 2297 ITVKDVNDHSPKFSRATYSFDIPEDMAAGSIVAAILASDSDSGINGEVTYS 2347
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + T++V D NDN P F + Y + I E+ GT V V A+DAD G N ++ ++
Sbjct: 2601 PLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGTDVIQVFATDADEGTNGQIRFS 2660
Query: 146 ELEPNGLFSSDLRVEWV 162
P G +SD R++ V
Sbjct: 2661 --IPGGNTNSDFRIDSV 2675
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
I V D ND+ PIF ++Y + + ED+P G+ ++ VSA+D D G N+ L ++ + N L
Sbjct: 933 IFVNDINDHPPIFQETEYRVDVSEDIPKGSYIKGVSATDGDSGQNANLRYSLVSGNAL 990
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL +C +I + D+NDN P FP S+ + E++ +G +V V+A+DAD G N+ ++++
Sbjct: 1762 PLSSSCMLSISILDENDNAPSFPKPSVSVDVLENMRIGELVASVTATDADSGQNADITYS 1821
Query: 146 ELEPN--GLFS 154
N G FS
Sbjct: 1822 ITATNNHGTFS 1832
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ NP T ++ + R L E + K + + G T V D NDN P
Sbjct: 2357 FLLNPVTGVFN----VTRPLDYEVQQFYILTAKAR--DGGGQASTVRVYFNVLDVNDNPP 2410
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F S YS S+ E +P G+ + V ASDAD G N++L +
Sbjct: 2411 AFNTSVYSTSVSESLPAGSSIVTVGASDADDGPNAQLLY 2449
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + I V ++N + P F SQ S ++PE + VGT ++ +SA D D +N +
Sbjct: 3534 NP-PLSARTSVRIAVTEENHHTPEFSQSQVSATVPESIAVGTAIRTLSARDKDREMNGVI 3592
Query: 143 SWNELEPN--GLFSSDLR 158
++N N GLFS + R
Sbjct: 3593 TYNITSGNDRGLFSINSR 3610
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + ++D NDN P F QY S+ ED VG+ V V+ASD D G N+++ +
Sbjct: 709 GYLQVNVTIQDINDNPPSFEQDQYQTSVFEDAAVGSSVLQVAASDGDEGANAEIRY 764
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P PL + + D NDN P+F QY ++ E+ P G+ V VSA+D DLG N
Sbjct: 1133 GGSP-PLRSAGRVNVTLRDVNDNRPVFYPVQYFANVKENEPSGSYVTTVSATDPDLGRNG 1191
Query: 141 KLSW 144
+ +
Sbjct: 1192 TVKY 1195
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI + D NDN P F Y L PE VG++V V+A+D D GVN K+ +
Sbjct: 3323 STDVTIFITDINDNAPRFSRPSYYLDYPELTEVGSLVTQVTATDPDKGVNGKIFY 3377
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+F NP T L R R L V G P L + ++ V D NDN
Sbjct: 2874 GQFSINPATGQIITSSLLDREERANYQLLVVAT---DGGQPQGLSSSATVSVTVADINDN 2930
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G++V V+ +D D G N++L ++
Sbjct: 2931 PPRFHHHPYVTHIPASTAAGSLVFAVTVTDEDAGANAQLHYS 2972
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + N +++++D NDN P+F + Y E+ G++V V A D D G NS++ +
Sbjct: 1547 PLSASVNVSVLLDDVNDNRPLFNSTNYVFHFAEEQKRGSLVGRVFAEDKDFGPNSEIRYA 1606
Query: 146 ELEPNGLF 153
P F
Sbjct: 1607 FETPQANF 1614
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E + N K + P + I V D NDN PIF SIPE++
Sbjct: 1842 LVKKLDYETQSVYRLNVSAKDNGRPPRSSSIPVIIQVRDFNDNPPIFTPGDIFKSIPENL 1901
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE--PNG-LFSSDLRVEWV-INRSVDQH 170
P T V +++A D D +N +L ++ ++ P G FS D + N+ VD+
Sbjct: 1902 PASTSVMMITAHDTDADINGQLEYSIVQQVPRGNHFSIDASTGVIYTNQEVDRE 1955
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+ V D NDN P+F +Y + E+VP GT V ++A+D D G N+ +++
Sbjct: 3649 TVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTVVKMTATDGDSGANAVMAY 3699
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + G L R +E V N K P V I + D ND P F S +
Sbjct: 1001 LVTSAGLLDRETTSE----IVLNISAKDQGLQPRVSYTKLVINITDVNDQVPTFTQSTFH 1056
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+S+ E P GT + V+SA+D DLG N + ++
Sbjct: 1057 VSLVEHAPAGTELLVLSATDDDLGSNGTVHFS 1088
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V D DN P+F YS + E+V VGTV+ VSA+ DL N + GLF
Sbjct: 1249 TVTVIDTQDNPPVFSQKVYSFVMFENVGVGTVIGTVSATTVDLNTNISYLITSGDQRGLF 1308
Query: 154 SSDLRVEWVINRSVDQH 170
+ + + VD+
Sbjct: 1309 GVNGAGQITASSQVDRE 1325
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 25 YLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNP 84
Y + +SG A F+I + + + + L R ++ + L V + S P
Sbjct: 2133 YFIVAVRSGGKAAGRLFTIGRH-----SGVIQTAAELDREQGSDLYLLDVYAIESDASQP 2187
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP ++I E+V G + ++A+DAD G N+ +++
Sbjct: 2188 --RTQRAEVEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALVTY 2245
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI V DQNDN P F +SQ +L ++ +G+++ V A D D G N ++ + +E +
Sbjct: 1982 NVTIWVTDQNDNIPTF-MSQNALVAEPNIVIGSILTTVVAYDPDEGANGEVEYELVEGDS 2040
Query: 151 GLF-----SSDLRV 159
G F S D+R+
Sbjct: 2041 GTFIMDRYSGDIRL 2054
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T ++I+ D ND P F SQ I E+ PV TVV V ASD+D G NS + ++
Sbjct: 2499 FTSTAQVSVILLDVNDCPPTF-TSQKMTYIQENTPVDTVVFAVHASDSDSGPNSYVEYSL 2557
Query: 147 LEPN------GLFSSDLRVEWVINR 165
P G D+R+ ++R
Sbjct: 2558 RGPFSNKFSIGTIDGDVRLVGELDR 2582
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
I+V D NDN+P+FP + +S ED G V + +A+D D+G N
Sbjct: 600 ILVLDINDNSPVFPDASIVVSFKEDASSGRQVILDTATDTDIGSN 644
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSW 144
PL+ + + D NDN P F + Y + + V VGT ++QVV+ D G+NS++ +
Sbjct: 3430 PLMSETTVIVNIVDSNDNPPQFDLPNYFTPVTKSVKVGTRLIQVVANDKKDFGLNSEVEY 3489
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 77 TKHKGSNPGP-LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVS 130
T H N P L G TI + D NDN+P+ FP + S+ E+ +GTVV +++
Sbjct: 798 TIHAVDNGVPSLSGRAEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLT 857
Query: 131 ASDAD 135
SD+D
Sbjct: 858 VSDSD 862
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + ++D NDN P F Y S+ E P T + VSASD D N +
Sbjct: 1655 PRPLRDQAKVQVYIQDINDNQPKFTKDIYQASVSESAPNVTQLLRVSASDVDENRNGLVH 1714
Query: 144 WNELEPN 150
+ E N
Sbjct: 1715 YRVAEGN 1721
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P+F Y ++I E PV + V A+D D G N ++ ++
Sbjct: 1452 ISVYDVNDNSPVFDQLSYEVTILESEPVNSRFFKVEATDKDSGFNGEIMYD 1502
>gi|410260548|gb|JAA18240.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410289524|gb|JAA23362.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410330019|gb|JAA33956.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|340728577|ref|XP_003402597.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus terrestris]
Length = 931
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKV--ENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P T + G L R R E + L++ ++ KG++ PL + V+D NDN
Sbjct: 707 FRVDPVTGVLTVFGRLDRE-RQEIYELRIRAQDNGGKGTDSPPLYSDALVRVTVDDVNDN 765
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSD 156
P F +S Y++ I EDVP+ TVV VV A+D D + + + +E G F D
Sbjct: 766 APSFALSTYTVKIREDVPIWTVVAVVDATDPDEASGGDIEYFLSDAMESEGYFKVD 821
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I V D NDN+P F S+ + I E+ P GT V ++A D D G N+ +S++
Sbjct: 275 SAKVKINVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYISYS 330
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN P+F Y + +PE P+ T V + +DAD G N+
Sbjct: 177 DLNDNAPVFSREIYEVKVPETAPINTPVIRLKVTDADEGKNA 218
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ + D NDN P F S S I E GT V +A+DADLG N++++++ + +
Sbjct: 649 VTILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGENARVTYSLVTE----T 704
Query: 155 SDLRVEWV 162
+D RV+ V
Sbjct: 705 NDFRVDPV 712
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 90 TCNTTIIVE--DQNDN--NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-LGVNSKLSW 144
+ T +I+E D N+N P+F S S+ E+ P+GT+V V A DAD LG +S++ +
Sbjct: 856 SSETMVIIEVVDVNENLHAPVFDDFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGY 915
Query: 145 NELEPN--GLFSSD 156
+ G+FS D
Sbjct: 916 TIRGGDGIGIFSID 929
>gi|4826673|ref|NP_004923.1| cadherin-6 preproprotein [Homo sapiens]
gi|1705545|sp|P55285.1|CADH6_HUMAN RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|974185|dbj|BAA06562.1| cadherin-6 [Homo sapiens]
gi|119631169|gb|EAX10764.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_b [Homo
sapiens]
gi|158256016|dbj|BAF83979.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPYVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|426385038|ref|XP_004059045.1| PREDICTED: cadherin-6 [Gorilla gorilla gorilla]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|332251712|ref|XP_003274990.1| PREDICTED: cadherin-6 [Nomascus leucogenys]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPI 106
+ V T+K+ L E+ KV K + SNP GP + I+VED D P+
Sbjct: 326 EGVITVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPV 382
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
F Y L I ED + T + V+A D D N
Sbjct: 383 FSKLAYILQIREDAQINTTIGSVAAQDPDAARN 415
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ V GS P L GT +IV+D NDN P FP Y +IPED P GT
Sbjct: 2325 ETKEHFVLVITATDAGS-PA-LTGTGTINVIVDDINDNVPTFPSKMYLTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNS 140
V +V+ASDAD N+
Sbjct: 2383 VLLVNASDADASTNA 2397
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 1889 FFLNPVTGVFN----LTRILDYEAQQYYILTVRAE--DGGGQFTTIRIYFNILDVNDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E++P+G+ V V + +DAD G+NS+L+++
Sbjct: 1943 IFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYS 1982
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T ++L V+ T +GS P T +I++ D ND PIF +S YS+++PE++
Sbjct: 2221 KTPTYFLTVQATD-RGSTP--RTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLGTLPR 2277
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
T++QVV A D D G NSKLS+ NE L +S +LRV ++R +H
Sbjct: 2278 TILQVV-ARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEH 2329
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEGTNADIRY 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 VFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N TII+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1079 PLSATVNVTIILEDVNDNRPLFNSTNYTFYFEEEQRAGSSVGKVSALDKDFGPNGEVRYS 1138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P+GT V V+A D D +N +LS+
Sbjct: 1434 PIGTSVISVTARDPDADINGQLSY 1457
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T+E++ V GS P PL + + + V D NDN
Sbjct: 2406 SQFTINPSTGQIITSALLDR--ETKENYTLVVVCSDAGS-PEPLSSSTSVVVTVTDVNDN 2462
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2463 PPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYS 2504
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ +E + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVSEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG+N
Sbjct: 665 GSPPQSSIARINVSLL--DVNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGLNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVRYS 727
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNPIF + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2134 LSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVCATDGDEGTNGQVRY-- 2191
Query: 147 LEPNGLFSSDLRVEWVIN 164
G+ D E+ I+
Sbjct: 2192 ----GIVDGDANQEFRID 2205
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L K KG NP PL IIV ++N + P F S S +IPE +G V+
Sbjct: 3053 QNFLITVTAKDKG-NP-PLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGATVRT 3110
Query: 129 VSASDADLGVNSKLSWN 145
VSA D D +N + ++
Sbjct: 3111 VSARDRDAAMNGLIRYS 3127
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSASD D G N ++ +
Sbjct: 2855 STDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSASDPDEGSNGQVFYFIKSQ 2914
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2915 SEYFRINATTGEIFNKQVLKYQN 2937
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPLG 2094
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P V + + D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAE 626
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ YS+ I E
Sbjct: 3359 GLLDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFSLNIYSVQISE 3415
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE-------PNGLFS 154
VP GT V VSA D+D S SW+ NG FS
Sbjct: 3416 GVPTGTHVTFVSAFDSD----SVPSWSRFSYFIGSGNENGAFS 3454
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P+F Y +++ E PV + V A D D G N +++++ E N
Sbjct: 983 TVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGN 1039
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 840 AINQVTGQLTTASVIDR 856
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2954 TSSDRGNPS-LLSETTVTINTVDSNDNAPQFLEMKYFTPVTKNVKVGTKLIKVTAVDDKD 3012
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS++ + N G F D W+
Sbjct: 3013 FGLNSEVEYFISSENHLGKFKLDNNTGWI 3041
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
>gi|410056082|ref|XP_003953964.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Pan troglodytes]
Length = 2852
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 416 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 474
Query: 129 VSASDADLGVNSKLSWNELEPN 150
V A+D D G N+ + ++ L N
Sbjct: 475 VQATDRDQGQNAAIHYSILSGN 496
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 766 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 825
Query: 150 NGLFSSD 156
F D
Sbjct: 826 VPQFRID 832
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 311 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 367
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D +N+ L + L
Sbjct: 368 TIRASDRDSPINANLRYRVL 387
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A D D G N+++
Sbjct: 969 SPTPLSTSVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAHDPDEGPNAQI 1028
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L + DLR
Sbjct: 1029 MYQIVEGDMRHFFQLDLLNGDLRA 1052
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 531 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 589
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 590 ENARLHYRLVDTASAF 605
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 874 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 923
>gi|297295315|ref|XP_001088343.2| PREDICTED: protein dachsous-like [Macaca mulatta]
Length = 1635
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + + V D NDN P+F S+YS+S+PE++PVGT + ++A+D D
Sbjct: 213 TALDGGDPV-LSGTTHIRVTVLDANDNAPLFAPSEYSVSVPENIPVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GMNGKLTYS 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ V D NDN P+F Y +S+PE++PVGT V V+A+D D GV+ ++++
Sbjct: 1006 VTVVDVNDNAPVFTQPVYRVSVPENLPVGTPVLAVNATDQDEGVHGEVTY 1055
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T NP PL + T+ + D NDN P+F + Y++ + E+ P G + VSASD DL
Sbjct: 423 TATDKGNP-PLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVSASDPDL 481
Query: 137 GVNSKLSW----NELEPNGLFS 154
G N + + ++LEP L S
Sbjct: 482 GPNGLVYYYIVASDLEPRELSS 503
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL ++ V D NDN P FP S YS+ + E+ P G + V+A D D+ N+++S++
Sbjct: 1207 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDMDQNARVSYS 1266
Query: 146 ELE 148
E
Sbjct: 1267 LAE 1269
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
+ TL+ E + +E G G L+ + + V+D NDN P ++ + S+
Sbjct: 301 ISTLQPLDYEESRFYLMEVVAQDG---GALLASAKVVVTVQDVNDNAPEVILTSLTSSLS 357
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
ED GTV+ + S D D G N +++ +
Sbjct: 358 EDCLPGTVIALFSVHDGDSGENGEIACS 385
>gi|444725570|gb|ELW66133.1| Cadherin-6 [Tupaia chinensis]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGAVTAQDPDAARN 415
>gi|444525568|gb|ELV14094.1| Protocadherin gamma-A10 [Tupaia chinensis]
Length = 646
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G +P P GT ++ V D NDN P+F + +Y +S+PE+
Sbjct: 47 LERALDREEEAVHHLVLTASDGGDP-PRSGTVLISVTVFDANDNAPVFTLPEYRVSVPEN 105
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N ++++
Sbjct: 106 MPVGTQLLTVTATDRDEGPNGEVTY 130
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L K G +K + + + + + + G + T I VED NDN+P V+
Sbjct: 144 QLNKYTGEIKISENLDYEETDFYDIEIQAEDGGAYLATAKVLITVEDVNDNSPEITVTSL 203
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED P+GTV +++ D D G N +++ +
Sbjct: 204 FSPVTEDSPLGTVTALLNVHDLDSGHNGQVTCS 236
>gi|397495449|ref|XP_003818567.1| PREDICTED: cadherin-6 [Pan paniscus]
gi|410224428|gb|JAA09433.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPDAARN 415
>gi|426350356|ref|XP_004042743.1| PREDICTED: protocadherin gamma-B5 [Gorilla gorilla gorilla]
Length = 818
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 60 TLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L++ L E+H + ++ T G +P PL GT I V D NDN P+F Y +S+ E
Sbjct: 195 ALEKTLDREQHSYHRLVLTALDGGHP-PLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYVVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|403256576|ref|XP_003920945.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1087
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT + V D NDN P F Y + I ED
Sbjct: 690 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYVEVVDFNDNAPEFEQPFYRVQISED 748
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P+G +V VSA+DAD GVN ++S++ + + S +V+
Sbjct: 749 SPIGFLVIKVSATDADTGVNGEISYSLFQASDEISKTFKVD 789
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P P GT I+V D NDN P F S Y + PE+ PVG++V VSA D D G N
Sbjct: 217 GGSP-PRSGTALVHIMVVDINDNAPEFVQSLYEVQAPENSPVGSMVVSVSARDLDTGSNG 275
Query: 141 KLSW 144
++++
Sbjct: 276 EIAY 279
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND++P+F + SL I E G + SA D+D+G NS LS + PN F
Sbjct: 123 VRDINDHSPVFLDREISLKILESATPGAAFLLESAQDSDVGTNS-LSNYTISPNAYFHIK 181
Query: 157 LR--------VEWVINRSVDQH 170
+R E V+N+++D+
Sbjct: 182 VRDSGEGNIYPELVLNQALDRE 203
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 33 GMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
G A AF ++ + + T +L G L + ++ + + G L G C
Sbjct: 275 GEIAYAFFYATERILK--TFQLNSTSGNLYLKSELDYEAIQTYTLTIQAKDGGGLSGKCT 332
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+ V D NDN P +S + IPE+ P TVV V D D G N K
Sbjct: 333 VVVEVTDVNDNQPELLLSSLNSPIPENSP-ETVVAVFRIRDRDSGNNGK 380
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S D D N
Sbjct: 814 EARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVLDLDSEEN 872
Query: 140 SKLSWN 145
K+S +
Sbjct: 873 GKISCS 878
>gi|354473662|ref|XP_003499052.1| PREDICTED: cadherin-8-like isoform 1 [Cricetulus griseus]
Length = 799
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT + + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|296485264|tpg|DAA27379.1| TPA: protocadherin beta 16-like [Bos taurus]
Length = 1591
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE + + T G +P P GT I V D NDN P F Y
Sbjct: 980 RKYPELVLDKELDREEEPEISLTLTALDGGSP-PRYGTAQVRIEVVDINDNAPQFQQLLY 1038
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPE+ PVG++V VSASD D G+ K+S+ +P+ S L V E + + V
Sbjct: 1039 KVHIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKTGEIRLRKQV 1098
Query: 168 DQHT 171
D T
Sbjct: 1099 DFET 1102
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE ++ T G +P P GT + I V D NDN P F Y + IPED P G +
Sbjct: 202 REEEAEFRLTLTAQDGGSP-PRSGTAHIYIEVVDINDNAPEFEQPFYRVKIPEDSPKGFL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D GVN ++S++
Sbjct: 261 VVKVSATDVDTGVNGEISYS 280
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L G C I V D NDN P +S + IPE+ P TVV V S SD D N K+S
Sbjct: 325 GSLSGKCTVLIQVVDVNDNAPEVTMSALTGQIPENSP-ETVVAVFSVSDLDSEENGKVSC 383
Query: 145 N 145
+
Sbjct: 384 S 384
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P VS + IPE+ P T + V D D G N
Sbjct: 1111 KATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTSPIPENSPEITALAVFRIKDRDSGEN 1170
Query: 140 SK 141
K
Sbjct: 1171 GK 1172
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 1228 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 1281
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P+F + L IPE+ P GT + +A D D+G N+ ++ + PN F
Sbjct: 914 VKDINDHSPVFNEREIILKIPENSPTGTAFPLSNALDLDVGSNNIQNYT-ISPNFHFRVI 972
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 973 THKRSDGRKYPELVLDKELDRE 994
>gi|431906996|gb|ELK11115.1| Cadherin-19 [Pteropus alecto]
Length = 730
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 157 FSIEPTTGVIRISSIMDRELQ-DEYWVIIQAKDMVGL-PGALSGTTSVLIKLSDINDNKP 214
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +++ E P GT + + A D D+G N+++ ++
Sbjct: 215 IFKESLYRMTVSESAPSGTSIGKIEAYDNDIGENAEMDYS 254
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+ASDAD G N++L ++ L+
Sbjct: 96 IRVSDVNDNEPKFLDEPYEAVVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 155
Query: 152 LFSSD-----LRVEWVINRSV 167
FS + +R+ +++R +
Sbjct: 156 YFSIEPTTGVIRISSIMDREL 176
>gi|332234725|ref|XP_003266555.1| PREDICTED: protocadherin beta-17-like [Nomascus leucogenys]
Length = 796
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I++ D NDN P F +Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRTGTSQVVIVIVDINDNVPEFAQRRYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 256 TPIGSLVITVSARDLDAGTHGELSYS 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S I E+
Sbjct: 304 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDILENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKM 382
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P+F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITVRVSDVNDNAPVFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
Length = 781
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+DAD GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDADTGVNGEISYS 281
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNMTVLVADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|301753535|ref|XP_002912597.1| PREDICTED: protocadherin beta-8-like [Ailuropoda melanoleuca]
Length = 799
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R +E L++ T G +P P G I V D NDN P F Y + +PED
Sbjct: 196 LDKALDREQESELRLTLTAQDGGSP-PRSGIAQIYIEVVDINDNAPEFQQPLYRVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+GVN ++S++
Sbjct: 255 SPIGFLIVTVSATDVDIGVNGEISYS 280
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 493
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L G C V D NDN P VS ++ IPE+ P VV V+S SD D N
Sbjct: 320 EARDAGSLSGKCTVLTQVMDVNDNAPEVTVSAFTRQIPENSP-EAVVAVLSVSDLDSEEN 378
Query: 140 SKLSWN 145
K++ +
Sbjct: 379 GKINCS 384
>gi|348582924|ref|XP_003477226.1| PREDICTED: protocadherin gamma-A7-like [Cavia porcellus]
Length = 877
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE + T + G +P PL GT + V D ND+ P+F + QY +++PE++P+GT
Sbjct: 202 REEEVIHHLVLTAYDGGDP-PLSGTARIQVTVVDVNDHTPVFSLPQYQVTVPENIPIGTR 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V+A D D G+N +++++
Sbjct: 261 LLTVNAVDLDEGINGQVTYS 280
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVS 110
R N L A + V N K ++ G PL + +I V D NDN PIF S
Sbjct: 396 RSIDNYYRLITAKHLDREKCSVYNVTLKATDGGTPPLSTETHISIHVADTNDNPPIFSQS 455
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
YS+ IPE+ P G + V+A D D N++++++
Sbjct: 456 SYSVYIPENNPRGASIFSVTAHDPDSEKNAQVTYS 490
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I++ D NDN P V+ S
Sbjct: 297 LTGELSTLEGLDYEESSFYEMEVQAQDG--PGSLT-KAKVLIMILDVNDNAPEVTVTSVS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
SIPED P GTV+ + D D N +++
Sbjct: 354 NSIPEDTPPGTVIALFYLQDRDSEKNGEVT 383
>gi|354473664|ref|XP_003499053.1| PREDICTED: cadherin-8-like isoform 2 [Cricetulus griseus]
Length = 716
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT + + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|109506492|ref|XP_001055991.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|109507203|ref|XP_001065313.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|149017305|gb|EDL76356.1| rCG49451 [Rattus norvegicus]
Length = 792
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 61 LKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE + T G +P P GT I+V D NDN P FP Y +PE+
Sbjct: 196 LDKALDWEEQPEFSLTLTALDGGSP-PRSGTATIHIVVLDVNDNAPQFPQEFYETKVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG VV V+ D D GVN+++S++ + S D+R + IN
Sbjct: 255 SPVGLVVIKVTGEDGDSGVNAEISYSFFDA----SEDIRATFQIN 295
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF----- 153
D ND++PIF + L IPE+ VGT ++ A D+D G N ++ + PN F
Sbjct: 125 DINDHSPIFQDKKMILKIPENTAVGTAFRLERAQDSDGGRNGIQNYT-ISPNTFFHITIH 183
Query: 154 -SSDLRV--EWVINRSVD 168
S D + E V+++++D
Sbjct: 184 DSDDGMIYPELVLDKALD 201
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ V +SA+D+D G N+ ++++ L P
Sbjct: 438 TVQVSDINDNAPAFTQTSYTLFVHENNSPALHVGTISATDSDSGSNAHITYSLLPPQ 494
>gi|390459323|ref|XP_003732274.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-17-like
[Callithrix jacchus]
Length = 723
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I++ D NDN P F Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRTGTSQVLIVIVDINDNAPEFAQRLYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA+D D G + +LS++
Sbjct: 256 TPIGSLVVTVSATDLDAGTHGELSYS 281
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L C I V D NDN P +S IPE+
Sbjct: 304 LKKVLDFEE--IQSYHVEVEASDGGGLSEKCTVVIEVMDINDNAPELTMSLLISDIPENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKI 382
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 439 TVRVSDVNDNAPAFTQTSYTLFVRENNSPALHIGTVSATDRDSGTNAQVTYSLLPPQ 495
>gi|291387510|ref|XP_002710181.1| PREDICTED: protocadherin gamma subfamily B, 6 [Oryctolagus
cuniculus]
Length = 1066
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 47 IANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
I + +T YK V GTL R +T E+ + + T G P PL + T+ + D NDN
Sbjct: 683 IYSSSTNFYKLVTDGTLDRE-QTPEYNVTIIATD--GGQP-PLSSSSTVTLRIGDVNDNA 738
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P+F + Y + +PE+ P G + VSASD D+G N ++S+ ++LEP L S
Sbjct: 739 PVFHQAAYVIHVPENNPPGASIAQVSASDPDVGPNGQVSYSIVASDLEPRALSS 792
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 60 TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
+L+R L R E+ ++ T G +P P T I+V D NDN P+F +Y +S+ E
Sbjct: 484 SLERLLDREEQRSHRLTLTAWDGGDP-PRSATARVEILVRDANDNPPVFSKDEYRISVRE 542
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFSSDLRV-EWVINRSVD 168
+P G+ V V+A+D D G ++++ + FS D R E NRS+D
Sbjct: 543 SLPPGSSVLRVAATDQDEGPHAEIKYYVSSAAQSARDTFSLDERTGEIKNNRSLD 597
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 48 ANPTTRLYKNVGTLK--RALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
A T L + G +K R+L EE + L+VE + G L C I + D+ND
Sbjct: 577 ARDTFSLDERTGEIKNNRSLDFEEVERYTLEVE-----AKDGGGLSAHCKVVIEILDEND 631
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N+P ++ S I ED P GTV + D D G N ++ N
Sbjct: 632 NSPEITITSLSDQILEDSPPGTVAALFKTRDRDFGKNGLVTCN 674
Score = 39.3 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + L I E V G + + A+D D+ NS + ++ PN FS
Sbjct: 410 VVIEDINDHAPQFDKQEIHLEILESVSAGARMPLDPATDPDINTNSIKDY-QISPNPYFS 468
Query: 155 SDLRV 159
+RV
Sbjct: 469 LMVRV 473
>gi|358413184|ref|XP_003582489.1| PREDICTED: protocadherin beta-16-like [Bos taurus]
gi|359067550|ref|XP_003586351.1| PREDICTED: protocadherin beta-16-like [Bos taurus]
Length = 796
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE + + T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPEISLTLTALDGGSP-PRYGTAQVRIEVVDINDNAPQFQQLLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPE+ PVG++V VSASD D G+ K+S+ +P+ S L V E + + V
Sbjct: 248 KVHIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKTGEIRLRKQV 307
Query: 168 DQHT 171
D T
Sbjct: 308 DFET 311
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P VS + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTSPIPENSP-EIVVAVFSVSDPDSGDN 378
Query: 140 SKLSWN 145
K + +
Sbjct: 379 GKTTCS 384
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P+F + L IPE+ P GT + +A D D+G N+ ++ + PN F
Sbjct: 123 VKDINDHSPVFNEREIILKIPENSPTGTAFPLSNALDLDVGSNNIQNYT-ISPNFHFRVI 181
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 182 THKRSDGRKYPELVLDKELDRE 203
>gi|301607149|ref|XP_002933171.1| PREDICTED: cadherin-18-like [Xenopus (Silurana) tropicalis]
Length = 787
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ + + D NDN P FP Y
Sbjct: 215 GVIRTALPNMDREAREHYTVVIQAKDMAGQVGGLSGSTTINVTLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
L +PE VG+ V + A+DAD G+N+ + ++ +G+FS
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGLNADIRYSITNGDGVFS 315
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ + TT + +L R +T H++ + ++ PL I V+D NDN P
Sbjct: 101 FLIDDTTGDIHAMKSLDREQKT--HYVLHAQAIDRRTDK-PLEPKSEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
FP Y +++PE +GT V V+A+D D G ++++ ++ L+ FS D
Sbjct: 158 EFPDGPYIVTVPEMSEIGTSVIQVTATDGDDPTYGNSARVVYSILQGQPYFSVD 211
>gi|426231057|ref|XP_004009562.1| PREDICTED: protocadherin gamma-B5 [Ovis aries]
Length = 805
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ + ++ T G +P PL GT I V D NDN P+F Y +S+ E+VP GT
Sbjct: 202 REQQSYHRLVLTASDGGDP-PLSGTTELQIQVTDANDNPPVFSQDVYRVSLGENVPPGTT 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D GVNS+++++
Sbjct: 261 VLQVSATDQDEGVNSEIAYS 280
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ + D NDN P+F + Y + +PE+ P G ++ V ASD DLG N +S+
Sbjct: 427 PLCTHTSVTLHITDVNDNAPVFHQASYVVHVPENNPPGASIEQVRASDPDLGPNGHVSYS 486
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 487 IVASDLEPRALSS 499
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ED ND+ P F + + L I E P GT + A DAD+G+NS ++
Sbjct: 123 IEDVNDHTPKFSQNSFELQISESTPPGTRFILEVAEDADIGLNSLQTY 170
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G + G LV C I ++D+NDN P I E+ GT++ ++ D D G N
Sbjct: 316 EGRDGGGLVAQCTVEISIQDENDNRPDITFHSLVEMILENAVPGTLIALIKIHDRDSGEN 375
Query: 140 SKLSW 144
+++
Sbjct: 376 GEVNC 380
>gi|119631168|gb|EAX10763.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_a [Homo
sapiens]
Length = 386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 125 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 184
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 185 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEGL 234
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 68 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 127
Query: 152 LFS 154
FS
Sbjct: 128 YFS 130
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 251 TVKKLLDFEKK--KVYTLKVEASNPYVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 307
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 308 AYILQIREDAQINTTIGSVTAQDPDAARN 336
>gi|80751171|ref|NP_001032212.1| protocadherin gamma-A10 precursor [Rattus norvegicus]
gi|50512392|gb|AAT77591.1| protocadherin gamma a10 [Rattus norvegicus]
gi|149017340|gb|EDL76391.1| rCG49295, isoform CRA_aa [Rattus norvegicus]
Length = 929
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G NP P GT T+ V D NDN PIF ++Y +++PE+
Sbjct: 193 LERALDREEEAIHHLVLVASDGGNP-PRSGTVLITVTVFDANDNAPIFTSTEYRVNVPEN 251
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N ++++
Sbjct: 252 LPVGTRLLKVTATDKDEGANGEVTY 276
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L KN G +K + + + + + + G + T I VED NDN+P ++
Sbjct: 290 QLDKNTGEIKLSENLDYEERRFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 349
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED PVGTV+ +++ D D G N +++ +
Sbjct: 350 FSPVTEDSPVGTVIALLNVHDLDSGQNGEVTCS 382
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP PL + T+ V D NDN P F + Y IPE+ P G + V+A D D
Sbjct: 420 TATDGGNP-PLSTKAHFTLQVADINDNPPTFSHTSYLTYIPENNPRGASIFSVTALDPDS 478
Query: 137 GVNSKLSWNELE 148
N+++ ++ E
Sbjct: 479 KENAQILYSLAE 490
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F + I E+V G + A+D D+ VNS S+ +L PN FS
Sbjct: 118 IEVTDVNDNAPKFQAETLDVKINENVAPGMRFPLPEATDPDVDVNSLQSY-QLSPNKHFS 176
Query: 155 SDLRV--------EWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 177 LVVQSGAKGIKYPELVLERALDRE 200
>gi|345328979|ref|XP_001512413.2| PREDICTED: protocadherin Fat 4-like [Ornithorhynchus anatinus]
Length = 3217
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
TL++ L E L N S+ G PL N T+IVED NDN PIF +S+Y++++
Sbjct: 1425 TLRKDLDREMQALY--NLTITASDQGQPPLTTELNITVIVEDVNDNKPIFEMSKYNVTVH 1482
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ +GTV+ +A+D D+G N+++ +
Sbjct: 1483 ENAAIGTVLLATTATDLDVGANAEVKY 1509
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T N ++ VED NDN P FP + +++ E+ P T++ V+A+D D+G N+ + ++
Sbjct: 2079 LSATLNLSLTVEDVNDNPPTFPQESFRITVKENEPPQTILN-VTATDKDIGYNAAIHYSI 2137
Query: 147 LEPNGLF 153
+E LF
Sbjct: 2138 VETTSLF 2144
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 90 TCNTTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
T N ++V +D+NDN P F S Y +SIPE+ P GT V + +D D G
Sbjct: 1045 TANAMVLVSIQDENDNLPEFERSSYMVSIPENSPDGTTVFHIKVTDKDEG 1094
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 28 LRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL 87
++ +G A T++++ ++ N + N+ T+ R R E+ S P P
Sbjct: 1917 VKALTGSIAVTVTYALSSYLDNFSIDDQGNIVTVARLDREEQDLYSFVAEAVDSSTP-PN 1975
Query: 88 VGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+ + D NDN P+F + +LS PE T + SA+D D+G N+++++
Sbjct: 1976 TAVTMITVTIRDINDNPPVFSSLIPTTLSCPEG-QNSTDFGIFSATDRDIGDNARITY 2032
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPE---DVPVGTVVQVVSASDADLGVNSKLSW 144
I V D NDNNP F +S +IPE V TVV V+A+D D G N+ +S+
Sbjct: 1670 ITVLDVNDNNPEFQEQPFSFTIPEGRYGADVSTVVGKVAATDLDDGDNALISF 1722
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 26 LHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG 85
LH+ P+ AF + A I+ KN L R R ++ L+V+ T H P
Sbjct: 1100 LHILPEDS----AFQINDAGMIS------VKNSSVLDRE-RIGKYTLQVKATDHL---PP 1145
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNSKLS 143
TI + D+NDN+P+F + Y +I + VG T+VQ+VS D D G N +S
Sbjct: 1146 HSEAQAVITISLLDENDNSPVFKGTPYEQTIFSNRTVGMTIVQIVS-HDEDDGKNGIIS 1203
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN+P+F S YS+SI E P+ V V A+D D ++ L
Sbjct: 842 DINDNSPVFLNSSYSISILETFPLHNTVIRVEATDKDYSLDYHL 885
>gi|395537667|ref|XP_003770815.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1
[Sarcophilus harrisii]
Length = 2651
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P + + + + R E+ L VE +G NPGP T I+VED+NDN
Sbjct: 350 GAFEIDPRSGVVRTRSVVDRE-EVAEYQLLVE-ANDQGRNPGPRSATATVRILVEDENDN 407
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
P F +Y + +PEDV V T + V A+D D G N+ L ++ + N
Sbjct: 408 YPQFSEKRYVVRVPEDVAVNTPILWVQATDRDQGQNAALHYSIVSGN 454
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++
Sbjct: 719 TAQVFINVTDANTHRPVFQSSHYTVSVREDQPVGTSIATISATDEDTGENARITY 773
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 15 WSISKLLESR---YLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHW 71
+ + L + R Y H+ P +G A + P R K+ H
Sbjct: 234 YQMEALFDERSNGYFHIEPDTG----------AVTTSRPLDRETKDT-----------HV 272
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
LKV H G T+ V D ND++P+F +Y ++ E++ VG V + A
Sbjct: 273 LKVTAVDHGSPQRS---GATYLTVTVSDTNDHSPVFEQVEYRETVRENLEVGYEVLTIRA 329
Query: 132 SDADLGVNSKLSWNELE-PNGLFSSDLRVEWVINRSV 167
+D D N+ + + LE +G F D R V RSV
Sbjct: 330 TDGDAPSNANMRYRLLEGADGAFEIDPRSGVVRTRSV 366
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + + V D NDN PIF S + ++ E+VP+G V
Sbjct: 481 EYTLRIK--AQDGGRP-PLINSSGLVNVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVL 537
Query: 128 VVSASDADLGVNSKLSW 144
+ A DAD G N++L +
Sbjct: 538 HIQAVDADSGENARLHY 554
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + I++ D NDN P F Y S+ ED P T V VSA+D D G N +L +
Sbjct: 822 TTSLEILILDANDNVPHFLRDFYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLY 876
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I V D NDN+P+F Y L + ED VG+ V + A D D NS +++
Sbjct: 619 SVAITVLDVNDNDPVFTQPVYELRLNEDATVGSSVLTLQARDRD--ANSVITYQ 670
>gi|359067597|ref|XP_003586360.1| PREDICTED: protocadherin beta-17 [Bos taurus]
gi|296485246|tpg|DAA27361.1| TPA: protocadherin beta 17-like isoform 1 [Bos taurus]
Length = 797
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT IIV D NDN P F Y + +PE+ P+G++
Sbjct: 202 REEQPELRLTLTAMDGGSP-PKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPENSPIGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G++ +LS++
Sbjct: 261 VITVSARDLDAGIHGELSYS 280
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L G C I V D NDN P VS IPE+
Sbjct: 303 LKKKLDFEE--IRSYHMEIEASDGGGLSGKCTVAIEVMDVNDNAPELTVSLLINDIPENT 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD+D G N K+
Sbjct: 361 P-DTVVAVFGISDSDSGNNGKM 381
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|126320889|ref|XP_001364843.1| PREDICTED: cadherin-6 [Monodelphis domestica]
Length = 790
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + A DAD+G N+++ ++ E GL
Sbjct: 264 NPPRFPQSTYQFKTPESAPPGTPIGRIKAIDADVGENAEIEYSITEGEGL 313
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P+F Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPMFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ K+ K + SNP GP T I+VED D P+F
Sbjct: 330 TVKKVLDFEKK--KLYTLKVEASNPRVEPRFLHLGPFKDTATVRIMVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + VSA D D N
Sbjct: 387 SYVLQIREDAQINTTIGSVSAQDPDAAKN 415
>gi|395817817|ref|XP_003782344.1| PREDICTED: uncharacterized protein LOC100956225 [Otolemur garnettii]
Length = 1897
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I++ D NDN P F Y +PE+
Sbjct: 1490 LDKALDREEQPQLRLTLTAMDGGSP-PRTGTSQVLIVILDINDNAPEFVQRLYEAQVPEN 1548
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G+N +LS++
Sbjct: 1549 SPIGSLVIKVSARDLDAGINGELSYS 1574
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I V D NDN P F Y +PE+
Sbjct: 937 LDKALDREEQPQLRLTLTALDGGSP-PRSGTSEIQIQVLDINDNAPEFTQEFYEAQVPEN 995
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P G+++ VSA D D G ++S+
Sbjct: 996 SPFGSLITTVSARDLDAGSFGEVSY 1020
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ + T G P P GT I+V D NDN P F S Y + +PE+ P+ ++
Sbjct: 202 REEQPEFSLTLTALDGGAP-PRSGTATVLIVVLDNNDNAPEFLQSLYEVQVPENSPLNSL 260
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V VSA D D G +++ LF D
Sbjct: 261 VLAVSARDLDAGAYGNVAY------ALFQGD 285
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 61 LKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
LKRAL E + VE G G L G C I V D NDN P +S S S PE+
Sbjct: 302 LKRALDFETTRYYNVEIVAIDG---GGLSGKCTVAIEVMDVNDNAPEITMSTLSSSTPEN 358
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
P TVV V S SD D G N K+
Sbjct: 359 SP-ETVVAVFSVSDLDSGDNGKM 380
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + S+ G L G C I V D NDN P +S IPE+
Sbjct: 1597 LKKVLDFEE--IQSYRMEVEASDGGGLSGKCAVVIEVMDINDNAPELTMSLLISDIPENS 1654
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV + SD D G N K+
Sbjct: 1655 P-ETVVAIFRISDPDSGDNGKM 1675
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++AL EE + L +E T G L G C+ + V D NDN P +S IP
Sbjct: 1043 LRKALDFEEFQSYHLDIEATDGGG-----LTGKCSLVLKVLDVNDNAPELTISSLFSPIP 1097
Query: 118 EDVPVGTVVQVVSASDADLGVNSKL 142
E++ +V V S SDAD G N ++
Sbjct: 1098 ENLQ-EIIVAVFSVSDADSGHNQQV 1121
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+++ D NDN P F + Y+L + E+ + +SA+D D G N++++++ L P
Sbjct: 437 TVLISDVNDNAPAFTQTSYTLFVGENNSPALHIGTISATDRDSGTNAQVTYSLLPPQ 493
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ D ND++P F + L IPE+V GTV + A D D+G N+ ++ + PN F
Sbjct: 123 LRDINDHSPEFLEGEVRLKIPENVQPGTVFPLKIAQDFDIGSNTVQNYT-ISPNSHF 178
>gi|296485247|tpg|DAA27362.1| TPA: protocadherin beta 17-like isoform 2 [Bos taurus]
Length = 796
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT IIV D NDN P F Y + +PE+ P+G++
Sbjct: 201 REEQPELRLTLTAMDGGSP-PKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPENSPIGSL 259
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G++ +LS++
Sbjct: 260 VITVSARDLDAGIHGELSYS 279
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L G C I V D NDN P VS IPE+
Sbjct: 302 LKKKLDFEE--IRSYHMEIEASDGGGLSGKCTVAIEVMDVNDNAPELTVSLLINDIPENT 359
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD+D G N K+
Sbjct: 360 P-DTVVAVFGISDSDSGNNGKM 380
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 435 NITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 488
>gi|348583041|ref|XP_003477283.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15-like [Cavia
porcellus]
Length = 794
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ ++ T G +P P GT ++V D NDN P F + Y + +PE+ P+GT+
Sbjct: 200 REEQSEFRLTLTALDGGSP-PRSGTAKIRVLVMDVNDNAPAFAQTLYEVQVPENTPLGTL 258
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ VSA D D+G N+++S++
Sbjct: 259 IVKVSARDLDIGTNAEISYS 278
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T++V D NDN P F S Y+LS+PE+ + VSA+D+D G N++L+++
Sbjct: 435 TVLVSDVNDNAPTFTQSSYTLSVPENNSPALHIGSVSATDSDSGTNAQLTYS 486
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L I E+ P GTV + A D D+G+N+ ++N + PN F
Sbjct: 119 LLVGDINDHSPEFPEKEMTLKISENSPPGTVFLLKKAQDLDVGINNIQNYN-ISPNFHFH 177
Query: 155 SDLR--------VEWVINRSVDQH 170
+R E V+++ +D+
Sbjct: 178 VSIRNQGDDRKHPELVLDKELDRE 201
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 63 RALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPED 119
RAL E + +H+ PL G + V D NDN P + P+ S E
Sbjct: 515 RALDYEAFXAFEFPGARHRSRGRPPLSGQARVRVRVLDANDNAPFVLHPLQNASAPCTEL 574
Query: 120 VPV----GTVVQVVSASDADLGVNSKLSWNELEPN--GLFS 154
+P G ++ V A DAD G N+ LS+ L+ + GLFS
Sbjct: 575 LPRAAQPGYLLTKVVAVDADAGQNAWLSFQLLQASEPGLFS 615
>gi|348568994|ref|XP_003470283.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6-like [Cavia porcellus]
Length = 790
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADIGENAEIVYSITDGEGL 313
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + K P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAINRKTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+++ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVRKLLDFEKK--KVYTLKVEASNPRVETRFQYLGPFKDSATVRIVVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYVLQIREDAQINTTIGSVTAQDPDASRN 415
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P+F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2128 AHDGPHEGRANLTVLVEDVNDNAPVFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGH 2187
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2188 ISYHLASPAEGFSVD 2202
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1585 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1643
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N +++
Sbjct: 1644 DAPAGTLLLQLQAHDPDAGANGHVTY 1669
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS++++N
Sbjct: 870 PAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPSTAPGTLIYTLRALDPDSGVNSRVTFN 929
Query: 146 ELE-PNGLFSSD 156
L+ G+F+ D
Sbjct: 930 LLDGGGGVFTVD 941
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++ ED PVG + V ASDAD G + + +
Sbjct: 2358 PRSSAVPVTVTVLDVNDNPPVFTRASYRVAVSEDTPVGAELLHVEASDADPGPHGLVRFT 2417
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2418 LSSGDPAGLFELD 2430
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T V L R R E H L V + H GS P T T+ V D ND P
Sbjct: 1369 FRLHPSTGALSLVRPLDREHRAE-HLLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAP 1424
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1425 AFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1463
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L + LE
Sbjct: 2470 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYTLLE 2524
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ P GT V V A D D G + +LS+
Sbjct: 660 GGLKSIVYVKVFVSDENDNPPQFYPREYAASLSAQSPPGTAVLRVRAHDPDQGPHGRLSY 719
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R V+
Sbjct: 720 HILAGNSPPLFALDEHSGLLTVAWPLARQVN 750
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1482 TLRALDREEQEEINLTVYARDRGSP-PLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEG 1540
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D+G N +L + L +P+G F DL
Sbjct: 1541 QDPQTLT-TLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1579
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 518 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLTSSATVSVALQDVNDNEP 573
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 574 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 613
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P G+ V
Sbjct: 1063 ELYTLKVMAVSGSKAESGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGSSVG 1122
Query: 128 VVSASDADLGVNSKLSWN 145
V ASD D G N +L+++
Sbjct: 1123 RVYASDRDSGPNGRLTYS 1140
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L IPE +GT
Sbjct: 98 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGT 157
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 158 RYPLEPARDADAG 170
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2249 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2287
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1711 GAAAGPLSTTVPVTITVRDVNDHAPTFPSSPLRLRLPRPGPSLSTPTLALATLRAEDRDA 1770
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1771 GANASI 1776
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G
Sbjct: 2034 LVGSATLTVMVIDTNDNRPTIP-QPWELQVSEDALLGSEIAQVTGNDVDSG 2083
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V + GS P GT + I V D NDN+P
Sbjct: 1151 FRIHPQTGEVTTLQTLDRE-RQSSYQLLVR-VQDGGSPPRSATGTVH--IAVLDLNDNSP 1206
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1207 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1262
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + LG + L+ + +P GLFS D
Sbjct: 785 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 837
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 208 GDLDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 263
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD N +++ + E +G FS D
Sbjct: 264 SLAPGSPVLQVYASDADADANGAVTYEINRRQSEGDGPFSID 305
>gi|390459370|ref|XP_003732290.1| PREDICTED: protocadherin gamma-B5 [Callithrix jacchus]
Length = 816
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + + T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHLLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFSQDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+PE++P GT V VSA+D D G+NS+++++
Sbjct: 250 SLPENLPPGTTVLQVSATDQDEGINSEITYS 280
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + + + + D NDN P+F Y +S+ E+ P G + VSASD DLG+N ++ +
Sbjct: 427 PLSSSISVILHISDVNDNAPVFHQPSYLVSVAENNPPGASIAQVSASDPDLGLNGQVFYS 486
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 487 IVASDLEPLALAS 499
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V D+NDNNP ++P S +P G +V V A DAD G N+ LS++ L
Sbjct: 546 VLVSDRNDNNPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 605
Query: 148 EPN--GLFSSDLRVEWV 162
+ + GLFS LR V
Sbjct: 606 QASEPGLFSLGLRTGEV 622
>gi|149017341|gb|EDL76392.1| rCG49295, isoform CRA_ab [Rattus norvegicus]
Length = 867
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G NP P GT T+ V D NDN PIF ++Y +++PE+
Sbjct: 193 LERALDREEEAIHHLVLVASDGGNP-PRSGTVLITVTVFDANDNAPIFTSTEYRVNVPEN 251
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N ++++
Sbjct: 252 LPVGTRLLKVTATDKDEGANGEVTY 276
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L KN G +K + + + + + + G + T I VED NDN+P ++
Sbjct: 290 QLDKNTGEIKLSENLDYEERRFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 349
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED PVGTV+ +++ D D G N +++ +
Sbjct: 350 FSPVTEDSPVGTVIALLNVHDLDSGQNGEVTCS 382
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP PL + T+ V D NDN P F + Y IPE+ P G + V+A D D
Sbjct: 420 TATDGGNP-PLSTKAHFTLQVADINDNPPTFSHTSYLTYIPENNPRGASIFSVTALDPDS 478
Query: 137 GVNSKLSWNELE 148
N+++ ++ E
Sbjct: 479 KENAQILYSLAE 490
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F + I E+V G + A+D D+ VNS S+ +L PN FS
Sbjct: 118 IEVTDVNDNAPKFQAETLDVKINENVAPGMRFPLPEATDPDVDVNSLQSY-QLSPNKHFS 176
Query: 155 SDLRV--------EWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 177 LVVQSGAKGIKYPELVLERALDRE 200
>gi|26331732|dbj|BAC29596.1| unnamed protein product [Mus musculus]
Length = 802
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R EE L++ T G + P GT I V D NDN P F Y IPED
Sbjct: 197 LDRALDREEEAELRLTLTAQDGGSL-PRSGTTEVHIEVLDINDNAPQFEQLFYKAQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+GVN ++S++
Sbjct: 256 SPIGFLIITVSATDKDIGVNGQISYS 281
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+ V D NDN PIF + Y++ I E+ + +SA+D+D G N+ +++
Sbjct: 430 PILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRENNSPALHIGTISATDSDSGSNAHITY 489
Query: 145 NELEPN 150
+ L P+
Sbjct: 490 SLLPPH 495
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 61 LKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
L +R +EH L E T+ + + G G C V D ND+ P +S ++ S
Sbjct: 298 LTGEVRLKEH-LDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPEIILSAFTNS 356
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I E++P T+V V S SD D G N K+S +
Sbjct: 357 ILENLP-ETMVAVFSVSDLDSGENGKVSCS 385
>gi|332234774|ref|XP_003266578.1| PREDICTED: protocadherin gamma-B5-like [Nomascus leucogenys]
Length = 818
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+ E+VP+GT V VSA+D D G+NS+++++
Sbjct: 250 SLRENVPLGTTVLQVSATDQDEGINSEITYS 280
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R E + + + K PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDREQTPEYNVTIIATDRGKP----PLSSSISVILHISDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDPDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
>gi|189054431|dbj|BAG37204.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDVNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|68534244|gb|AAH98575.1| Protocadherin beta 2 [Homo sapiens]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDVNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|80751167|ref|NP_001032214.1| protocadherin gamma-A5 precursor [Rattus norvegicus]
gi|50512406|gb|AAT77598.1| protocadherin gamma a5 [Rattus norvegicus]
gi|149017324|gb|EDL76375.1| rCG49295, isoform CRA_k [Rattus norvegicus]
Length = 932
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E L + T G NP T + ++ V D NDN P+F S+Y +++PE+ PVGT
Sbjct: 202 REKESALDLVLTALDGGNP-VHSSTVHISVTVLDANDNAPLFTQSEYRVNVPENTPVGTR 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ +++A+DAD G+N+KL+++
Sbjct: 261 LLILTATDADEGINAKLTFS 280
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESSFYLMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED GT++ + S DAD G N ++S +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEVSCS 385
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F YS SI E+ P G + V+A DAD G N++++++
Sbjct: 431 PLSTENHISLKVADINDNPPTFSRPSYSTSISENNPRGVSIFSVNAYDADSGDNARITYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
Length = 14186
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P+ TV
Sbjct: 8920 REKQHELNLQLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSPLDTV 8978
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINR 165
V VSA+DAD GVN ++++ G S D++ + I+R
Sbjct: 8979 VMQVSATDADEGVNGDVTYD----FGHVSDDVKKIFSIDR 9014
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ PV TV
Sbjct: 7356 REKQHELNLQLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSPVDTV 7414
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 7415 VMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 7454
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ PV TV
Sbjct: 8145 REKQHELNLQLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSPVDTV 8203
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 8204 VMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 8243
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P+ TV
Sbjct: 5912 REKQHELNLQLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSPLDTV 5970
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 5971 VMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 6010
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + G NP GT I V D NDN P+F + Y ++PE+ +GTV
Sbjct: 1880 REKEQNVNLVMVAVDGGNP-QRSGTATIQITVLDANDNAPVFEQAVYKANLPENAALGTV 1938
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSASDAD GVN ++++
Sbjct: 1939 VLTVSASDADEGVNGEVTY 1957
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + G NP GT I V D NDN P+F + Y +PE+ +GTV
Sbjct: 261 REKEQNVNLVMVAVDGGNP-QRSGTATIQITVLDANDNAPVFEQAVYKADLPENAALGTV 319
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSASDAD GVN ++++
Sbjct: 320 VLTVSASDADEGVNGEVTY 338
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + G NP GT I V D NDN P+F + Y +PE+ +GTV
Sbjct: 2669 REKEQNVNLVMVAVDGGNP-QRSGTATIQITVLDANDNAPVFEQAVYKADLPENAALGTV 2727
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSASDAD GVN ++++
Sbjct: 2728 VLTVSASDADEGVNGEVTY 2746
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 52 TRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
R Y + K R ++ + + T G +P GT + V D NDN P+F +
Sbjct: 5110 ARKYCELLLDKELDREDQREMMMLLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAV 5168
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
Y S+PE+ P+ TVV VSA+DAD GVNS++++
Sbjct: 5169 YKASLPENSPLDTVVMQVSATDADEGVNSEITY 5201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
P F FSI + T Y + K R E+ +K++ T G +P GT +
Sbjct: 9691 PHFVFSIQ---STNTGSKYGELLLEKELDREEQKDMKLKLTALDGGSP-QRSGTVVIHVT 9746
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P+F + YS ++PE+ + T V VSA+DAD G+N ++++
Sbjct: 9747 VLDANDNAPVFSQALYSATLPENSSMNTPVITVSATDADEGINGEVTY 9794
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ + TV
Sbjct: 10506 REKQHELNLQLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSHLDTV 10564
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 10565 VMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 10604
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+ R Y + K R ++ + + T G +P GT + V D NDN P+F +
Sbjct: 3490 SNRKYCELLLDKELDREDQKEMMMLLTALDGGSP-QRSGTVVIHVTVLDANDNAPVFSQA 3548
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
Y S+PE+ P+ TVV VSA+DAD GVN ++++
Sbjct: 3549 VYKASLPENSPLDTVVMQVSATDADEGVNKEITY 3582
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
I K ANP Y + L++ L E H L ++ G P GT N I V D N
Sbjct: 13557 ILKQHANPDGSKYAEM-VLQKPLDRERHPHLTLKLIAVDGGTP-QRSGTVNIDITVLDAN 13614
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DN P+F S Y SI E+ +GT V V+A+DAD G+N ++++
Sbjct: 13615 DNAPVFNQSVYKASIMENTKIGTNVVTVNATDADSGINGLITYS 13658
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT + V D NDN P+F + Y S+PE+ P+ TVV VSA+DAD GVN ++++
Sbjct: 1061 GTVVIHVTVLDANDNAPVFSQAVYKASLPENSPLDTVVMQVSATDADEGVNREITY 1116
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP GT N + + D NDN P+F S Y ++ E+ P GT++ V+ASD D G N
Sbjct: 11989 GGNP-QRSGTVNIDVDILDANDNAPVFNQSLYKATVTENAPKGTLIMTVNASDIDSGSNG 12047
Query: 141 KLSWN 145
K++++
Sbjct: 12048 KVTYS 12052
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
I K ANP Y + L++ L E H L ++ G P GT N I V D N
Sbjct: 12747 ILKQHANPDGSKYAEM-VLQKPLDRERHPHLTLKLIAVDGGTP-QRSGTVNIDITVLDAN 12804
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DN P+F S Y SI E+ +G+ V V+A+DAD G+ ++++
Sbjct: 12805 DNAPVFNQSVYKASIMENTKIGSNVVTVNATDADSGIYGLITYS 12848
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
G+ I V D NDN P+F + Y S+ E+ PVGT++ ++A+DAD GVN ++ ++
Sbjct: 4329 GSVKIHINVLDANDNVPVFSQAVYKASLQENSPVGTLILTLTATDADEGVNGEVVYD--- 4385
Query: 149 PNGLFSSDLRVEWVINR 165
G S D++ + I++
Sbjct: 4386 -FGHISEDIKSIFRIDQ 4401
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R ++E + T +P PL I+V D NDN P F +Y +I E
Sbjct: 11495 GPLDREFQSE---YNITITATDAGSP-PLASVKILKIVVNDINDNPPTFTQREYDANILE 11550
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+ PVGT V + A D D G N+K+ +
Sbjct: 11551 NQPVGTFVMKIQAVDVDDGSNAKIMY 11576
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L+GT I V D NDN P+ V +S +I ED P GT + V + DAD N
Sbjct: 12888 EAKDQGGLIGTSKIIIDVIDLNDNPPVINVMSFSSTISEDAPPGTTIAVFNVKDADSDKN 12947
Query: 140 SKL 142
++
Sbjct: 12948 GQI 12950
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI--FPVSQYSLSIPEDV-----PVGT 124
+++ T H G +P L TC + ++DQNDN P+ +PV Q S I ED+ P G
Sbjct: 11613 FQIKVTVHDGGSP-QLSSTCTVNVFIKDQNDNAPVVLYPV-QTSGFIAEDMVPFEAPRGY 11670
Query: 125 VVQVVSASDADLGVNSKLSWNELE---PN----GLFSSDLR 158
+V V A DAD G N+ L++ ++ PN G+ + ++R
Sbjct: 11671 LVTKVVAVDADSGHNAWLTYRVIKATRPNMFTVGMHTGEIR 11711
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+AL E EH L++ G +P GT + + V D NDN P+F Y +
Sbjct: 11283 LKKALDRETQAEHVLRINGID--GGSPA-RSGTASVHVRVLDANDNVPVFSQRVYKAFVM 11339
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ GTV+ ++A+DAD GV +S++
Sbjct: 11340 ENSARGTVITRLNATDADEGVYGAVSYS 11367
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+ + G L+GT I V D NDN P+ V +S ++ ED P GT + V + DAD
Sbjct: 13698 EAKDQGGLIGTSKIIIDVIDLNDNPPVINVMSFSSTVSEDAPPGTTIAVFNVKDAD 13753
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G C I V D NDN P+ + S ++ ED P GT+V +V+ D D G +
Sbjct: 11407 QAKDGGGQASHCKLIIDVMDVNDNKPVIEIKSASANVAEDSPAGTMVALVNVYDLDTGSS 11466
Query: 140 SKLSW 144
+++
Sbjct: 11467 GRVTC 11471
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 32/140 (22%)
Query: 11 EYNHWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEH 70
E H S S + S YL L ++G+ + A +F Y+ + L+ ++ ++
Sbjct: 13060 EETHISGSPI--SSYLSLNSENGVISAARSFD------------YEQIKELQIVVKAQD- 13104
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPV----SQYSLSIPEDVPVGT 124
G +P PL I+++DQNDN P ++PV S + +P VG
Sbjct: 13105 ----------GGSP-PLSSNVTVKILIQDQNDNPPQVLYPVQTGGSMVAEMVPRSADVGY 13153
Query: 125 VVQVVSASDADLGVNSKLSW 144
+V V A D D G N+ LS+
Sbjct: 13154 LVTKVVAVDVDSGQNAWLSY 13173
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 30/128 (23%)
Query: 23 SRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGS 82
S YL L ++G+ + A +F Y+ + L+ ++ ++ G
Sbjct: 13880 SSYLSLNSENGVISAARSFD------------YEQIKELQIVVKAQD-----------GG 13916
Query: 83 NPGPLVGTCNTTIIVEDQNDNNP--IFPV----SQYSLSIPEDVPVGTVVQVVSASDADL 136
+P PL + I+++DQNDN P ++PV S + +P VG +V V A D D
Sbjct: 13917 SP-PLSSNVSVKILIQDQNDNPPQVLYPVQTGGSMVAEMVPRSADVGYLVTKVVAVDVDS 13975
Query: 137 GVNSKLSW 144
G N+ LS+
Sbjct: 13976 GQNAWLSY 13983
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + +I+ D NDN P+F YS I E+ GT + VSA D+D N+++S+
Sbjct: 12999 PLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGTSIFTVSARDSDWNQNARISY 13057
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFS 154
V+D NDN P FP L I E G ++ +A DAD+G+NS S+ E P+ +FS
Sbjct: 9638 VQDVNDNAPNFPKDTVKLEITESADKGAKYRINAAHDADIGINSVQSYFLEQNPHFVFS 9696
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F + Y S+PE+ P+ TVV VSA+DAD VNS++++
Sbjct: 6607 VFSQAVYKASLPENSPLDTVVMQVSATDADEAVNSEITY 6645
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWNE---LEP 149
+ D NDN+P F + L + E +G + SA D DLG NS KLS N+ LE
Sbjct: 11210 ITDINDNSPTFAAGEIQLDLVESTILGRRFPLESAQDPDLGTNSVREYKLSPNDHFALEI 11269
Query: 150 NGLFSSDLRVEWVINRSVDQHT 171
N + + E V+ +++D+ T
Sbjct: 11270 NTQINGNAYPELVLKKALDRET 11291
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+++++D NDN+P+FP L I E G +V A DAD+G N + LE N F
Sbjct: 179 SLLIQDVNDNSPVFPKDVIKLEIRESAFKGARYRVNDAHDADIGHNVVKDY-ILEKNNHF 237
Query: 154 SSDLR--------VEWVINRSVDQHTNK 173
+R VE V+++ +D+ +
Sbjct: 238 VLSVRDDVEGSKSVELVLDKELDREKEQ 265
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+++++D NDN+P+FP L I E G +V A DAD+G N + LE N F
Sbjct: 1798 SLLIQDVNDNSPVFPKDVIKLEIRESAFKGARYRVNDAHDADIGHNVVKDY-ILEKNNHF 1856
Query: 154 SSDLR--------VEWVINRSVDQHTNK 173
+R VE V+++ +D+ +
Sbjct: 1857 VLSVRDDVEGSKSVELVLDKELDREKEQ 1884
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPV----SQYSLSI 116
R+ E+ V K + PL + I+++DQNDN P ++PV S + +
Sbjct: 12290 RSFDYEQIKQLVFTVKAQDGGSPPLSSNVSVKILIQDQNDNPPQVLYPVQTGGSMVAEMV 12349
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
P VG +V V A D D G N+ LS+
Sbjct: 12350 PRSADVGYLVTKVVAVDVDSGQNAWLSY 12377
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D NDN P F + I E +G+ + SA DAD+GVN + L PN F
Sbjct: 11892 TIEVLDVNDNAPTFQNNHLEFEISESAALGSRFVLESAYDADVGVNGLQDY-ILTPNDHF 11950
Query: 154 SSDLRV--------EWVINRSVDQHT 171
V E VI +S+D+ T
Sbjct: 11951 VLKQHVHPDGSKYAEMVIEKSLDRET 11976
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + +I+ D NDN P+F YS I E+ GT + SA D+D N+++S+
Sbjct: 13809 PLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGTSIFTFSARDSDWNQNARISY 13867
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
++FS +K + + G + A + K + + + G L + + V
Sbjct: 12051 YSFSKSKAGVTDAFDIDGDTGRITVAKEIDFEKDKRIEFRIEAKDQGGLTDSAKVEVEVL 12110
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P+ V ++ + ED VGT + +++ D D G N ++
Sbjct: 12111 DVNDNAPVINVMSFTNPVSEDSAVGTTIGIINVKDVDSGENGQV 12154
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+++++D NDN+P+FP L I E G + A DAD+G NS ++ L+ N F
Sbjct: 2587 SLLIQDVNDNSPVFPKDVIKLEISESAFKGARYYLNEAHDADMGKNSVQQYS-LQNNEHF 2645
Query: 154 SSDLR--------VEWVINRSVDQHTNK 173
++ VE V+++ +D+ +
Sbjct: 2646 VLSVKEGSDGSKNVELVLDKELDREKEQ 2673
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L C I + D NDN P+ V + +PEDV G+ V +++ D D
Sbjct: 386 LSSDCKLMIKITDVNDNAPVIHVKSLTDPVPEDVSPGSEVGIINVQDRD 434
>gi|297676219|ref|XP_002816038.1| PREDICTED: protocadherin beta-17-like [Pongo abelii]
Length = 796
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P +GT I++ D NDN P F +Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P G++V VSA D D G + +LS++
Sbjct: 256 TPTGSLVITVSARDLDAGTHGELSYS 281
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S I E+
Sbjct: 304 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDILENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P T V V SD D G N K+
Sbjct: 362 P-ETAVAVFGISDPDSGNNGKM 382
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITVRVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|148728175|ref|NP_444371.3| protocadherin beta 16 precursor [Mus musculus]
gi|13876292|gb|AAK26066.1| protocadherin beta 16 [Mus musculus]
gi|109733261|gb|AAI16626.1| Protocadherin beta 16 [Mus musculus]
gi|148678208|gb|EDL10155.1| mCG141291 [Mus musculus]
Length = 802
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R EE L++ T G + P GT I V D NDN P F Y IPED
Sbjct: 197 LDRALDREEEAELRLTLTAQDGGSL-PRSGTTEVHIEVLDINDNAPQFEQLFYKAQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+GVN ++S++
Sbjct: 256 SPIGFLIITVSATDKDIGVNGQISYS 281
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+ V D NDN PIF + Y++ I E+ + +SA+D+D G N+ +++
Sbjct: 430 PILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRENNSPALHIGTISATDSDSGSNAHITY 489
Query: 145 NELEPN 150
+ L P+
Sbjct: 490 SLLPPH 495
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 61 LKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
L +R +EH L E T+ + + G G C V D ND+ P +S ++ S
Sbjct: 298 LTGEVRLKEH-LDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPEIILSAFTNS 356
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I E++P T+V V S SD D G N K+S +
Sbjct: 357 ILENLP-ETMVAVFSVSDLDSGENGKVSCS 385
>gi|149017325|gb|EDL76376.1| rCG49295, isoform CRA_l [Rattus norvegicus]
Length = 870
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E L + T G NP T + ++ V D NDN P+F S+Y +++PE+ PVGT
Sbjct: 202 REKESALDLVLTALDGGNP-VHSSTVHISVTVLDANDNAPLFTQSEYRVNVPENTPVGTR 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ +++A+DAD G+N+KL+++
Sbjct: 261 LLILTATDADEGINAKLTFS 280
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 39 FTFSIAKFIANPTTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
F+F + + T +L N+G T++ E + +E G G L+ + +
Sbjct: 279 FSFRNEEDKISETFQLDSNLGEISTIQSLDYEESSFYLMEVVAQDG---GALLASAKVLV 335
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P ++ + S+ ED GT++ + S DAD G N ++S +
Sbjct: 336 TVQDVNDNAPEVILTSLTSSVSEDCLPGTIIALFSVHDADSGENGEVSCS 385
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F YS SI E+ P G + V+A DAD G N++++++
Sbjct: 431 PLSTENHISLKVADINDNPPTFSRPSYSTSISENNPRGVSIFSVNAYDADSGDNARITYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|426350303|ref|XP_004042718.1| PREDICTED: protocadherin beta-2 isoform 2 [Gorilla gorilla gorilla]
Length = 796
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 196 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 255 SPVGSQVAIVSARDLDIGTNGEISY 279
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 278 SYAFSQASEDIRKTFRLNAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 337
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 338 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 381
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L +PE + GT + A D D+G NS ++ + PN F +
Sbjct: 123 IRDINDHSPVFLDKEILLKVPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 181
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 182 LQDSLDGIILPQLVLNRALDRE 203
>gi|326673313|ref|XP_003199834.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 784
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L E EH L ++ G NP P +GT N ++ V D NDN P+F YS+S+
Sbjct: 192 LKKPLDREHKAEHLLILQAID--GGNP-PKLGTLNVSVTVLDTNDNRPVFSKDIYSVSLQ 248
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ PVGT V + A+D+D G NS++ ++
Sbjct: 249 ENSPVGTTVIKIKATDSDEGSNSEIEYS 276
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
PL C I ++D NDN P ++ S + ED GTV+ ++S SD D G N K+
Sbjct: 325 PLSAQCRVIIKIQDINDNKPEIELTSLSNIVSEDSKPGTVIALISVSDKDSGSNGKV 381
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 548 VFILDQNDNVPVILYPVSANGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 607
Query: 146 ELEPNGLFSSD 156
E+ + LF+ D
Sbjct: 608 EVSEHSLFALD 618
>gi|426350301|ref|XP_004042717.1| PREDICTED: protocadherin beta-2 isoform 1 [Gorilla gorilla gorilla]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLNAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L +PE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKVPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|9256612|ref|NP_061759.1| protocadherin beta-2 precursor [Homo sapiens]
gi|13431378|sp|Q9Y5E7.1|PCDB2_HUMAN RecName: Full=Protocadherin beta-2; Short=PCDH-beta-2; Flags:
Precursor
gi|5457039|gb|AAD43756.1|AF152495_1 protocadherin beta 2 [Homo sapiens]
gi|14009475|gb|AAK51623.1|AF217756_1 protocadherin-beta2 [Homo sapiens]
gi|68226681|gb|AAH98347.1| Protocadherin beta 2, precursor [Homo sapiens]
gi|119582387|gb|EAW61983.1| protocadherin beta 2 [Homo sapiens]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDVNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|269995991|ref|NP_001013427.2| protocadherin beta-2 precursor [Pan troglodytes]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQD 497
Query: 152 L 152
L
Sbjct: 498 L 498
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
D NDN P +S IPE++ T++ V S SD D G N ++ + ++ + FS
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRMVCS-IQDDLPFSLKP 397
Query: 158 RVE----WVINRSVDQHT 171
VE VI+ ++D+ T
Sbjct: 398 SVENFYTLVISTALDRET 415
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|62089076|dbj|BAD92982.1| protocadherin beta 2 precursor variant [Homo sapiens]
Length = 784
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 184 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 242
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 243 SPVGSQVAIVSARDLDIGTNGEISY 267
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 266 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 325
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 326 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 369
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 424 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 482
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 111 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 169
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 170 LQDSLDGIILPQLVLNRALDRE 191
>gi|109732291|gb|AAI15721.1| Protocadherin beta 16 [Mus musculus]
Length = 802
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R EE L++ T G + P GT I V D NDN P F Y IPED
Sbjct: 197 LDRALDREEEAELRLTLTAQDGGSL-PRSGTTEVHIEVLDINDNAPQFEQLFYKAQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+GVN ++S++
Sbjct: 256 SPIGFLIITVSATDKDIGVNGQISYS 281
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+ V D NDN PIF + Y++ I E+ + +SA+D+D G N+ +++
Sbjct: 430 PILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRENNSPALHIGTISATDSDSGSNAHITY 489
Query: 145 NELEPN 150
+ L P+
Sbjct: 490 SLLPPH 495
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 61 LKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
L +R +EH L E T+ + + G G C V D ND+ P +S ++ S
Sbjct: 298 LTGEVRLKEH-LDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPEIILSAFTNS 356
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I E++P T+V V S SD D G N K+S +
Sbjct: 357 ILENLP-ETMVAVFSVSDLDSGENGKVSCS 385
>gi|440902407|gb|ELR53204.1| Protocadherin beta-16, partial [Bos grunniens mutus]
Length = 784
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT IIV D NDN P F Y + +PE+ P+G++
Sbjct: 202 REEQPELRLTLTAMDGGSP-PKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPENSPIGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G++ +LS++
Sbjct: 261 VITVSARDLDAGIHGELSYS 280
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L G C I V D NDN P +S IPE+
Sbjct: 303 LKKKLDFEE--IRSYHMEIEASDGGGLSGKCTVAIEVMDVNDNAPELTISLLINDIPENT 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD+D G N K+
Sbjct: 361 P-DTVVAVFGISDSDSGNNGKM 381
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T I+V D NDN P F Y + + ED PVG++V VSA D D G N ++ +
Sbjct: 540 PLSRTTLVRILVLDINDNAPEFVQPLYKVQLCEDSPVGSLVVTVSARDLDTGSNGEIVY 598
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|426231041|ref|XP_004009557.1| PREDICTED: protocadherin beta-16 [Ovis aries]
Length = 752
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE + + T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPEISLTLTALDGGSP-PRYGTAQVRIEVVDINDNAPQFQQLLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ PVG++V VSASD D G+ K+S+ +P+ S L V
Sbjct: 248 KVHIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEV 294
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P VS + IPE+ P V V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTSPIPENSP-EIAVAVFSVSDPDSGDN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P+F + L IPE+ P GT + +A D D+G N+ ++ + PN F
Sbjct: 123 VKDINDHSPVFNEREIILKIPENSPTGTAFPLSNALDLDVGSNNIQNYT-ISPNFHFRVI 181
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 182 THNRSDGRKYPELVLDKELDRE 203
>gi|405971222|gb|EKC36072.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1006
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G+N G T N I + D+NDN+P+FP++ SLSIPED + + + SA D D+G N+
Sbjct: 110 GANSGTFFRTINVNISISDRNDNSPLFPMNSTSLSIPEDANINSTFPLSSALDKDMGENN 169
Query: 141 KLSWNELEP 149
L LEP
Sbjct: 170 SLKTYVLEP 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELE 148
T + V+D NDN P F SQY+++I ED+ VGT + VSASD D G N + +
Sbjct: 230 TMTINVAVQDINDNKPRFSYSQYNVTIQEDITVGTTIMKVSASDDDDGQNGVVEYQFSST 289
Query: 149 PNG----LFS 154
PNG LFS
Sbjct: 290 PNGESQKLFS 299
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + P PL T + +ED ND P F S Y+ + E+ V
Sbjct: 524 REQESSITFKVYAADNGTPVPLTATATVKLNIEDDNDEFPTFNKSSYNFQVMENKNADFV 583
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D+G N+ + +
Sbjct: 584 VGTVLATDKDIGSNAAIVY 602
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ V D NDN P F Y+ +I E+ G ++ V+ASD+D N+++ + +EPN F
Sbjct: 448 VQVLDTNDNEPKFDRDLYNATITENKAPGQMITKVTASDSDQENNAEVHY-AIEPN--FR 504
Query: 155 SDLRVE 160
S V+
Sbjct: 505 SKFEVD 510
>gi|397518014|ref|XP_003829195.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-2 [Pan paniscus]
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQD 497
Query: 152 L 152
L
Sbjct: 498 L 498
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
D NDN P +S IPE++ T++ V S SD D G N ++ + ++ + FS
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRMVCS-IQDDLPFSLKP 397
Query: 158 RVE----WVINRSVDQHT 171
VE VI+ ++D+ T
Sbjct: 398 SVENFYTLVISTALDRET 415
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|18087755|ref|NP_291063.1| protocadherin gamma-A2 precursor [Mus musculus]
gi|13876330|gb|AAK26085.1| protocadherin gamma A2 [Mus musculus]
gi|148678173|gb|EDL10120.1| mCG133388, isoform CRA_c [Mus musculus]
gi|223459982|gb|AAI39179.1| Protocadherin gamma subfamily A, 2 [Mus musculus]
Length = 931
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G NP GTC + V D NDN P F ++Y + +PE+
Sbjct: 196 LERALDREEEAVHHLVLVASDGGNP-VRSGTCRIRVKVLDANDNAPAFTQAEYRVRVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVGT + V+A+DAD G N+++++
Sbjct: 255 TPVGTRILTVTATDADEGYNAQVTY 279
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ + V D NDN P F ++ + S+
Sbjct: 302 TITKSLDYEKAKFHEIDIEAQDGPG-----LLTRTKVIVTVLDVNDNAPEFYMTSATASV 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSS-DLRVEWVINRSVDQH 170
PED P+GTV+ + + D D G N+ S E+ P L S D V R++D+
Sbjct: 357 PEDAPLGTVIALFNVHDRDSGQNAVVTCSLPEMLPFKLERSVDSYYRLVTTRALDRE 413
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 63 RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL E+ + + + G +P L + + V D NDN P FP YS IPE+ P
Sbjct: 408 RALDREQFSFYNITVSAKDGGSPS-LSTDAHLLLQVADINDNPPSFPRRVYSAYIPENNP 466
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELE 148
GT + V ASD D N+ ++++ E
Sbjct: 467 RGTSIFSVLASDPDSNDNAHVTYSLAE 493
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P F V L I E G + + SA DAD+G N+ L +L N FS D
Sbjct: 123 VTDVNDNAPRFGVEDPELKISETTTPGFRIPLKSAHDADVGENT-LQKYKLNSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRTGADGNKYPELVLERALDRE 203
>gi|194219797|ref|XP_001917802.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5 [Equus
caballus]
Length = 806
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 60 TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL++ L R ++ + ++ T G +P PL GT I V D NDN P+F Y +S+ E
Sbjct: 195 TLEKPLDREQQGYHRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFHQDVYRVSLRE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
+VP GT V VSA+D D GVNS+++++
Sbjct: 254 NVPPGTAVLQVSATDQDEGVNSQITYS 280
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + T+ + D NDN P+F + Y + + E
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSASISVTLHITDVNDNAPVFHQASYVVHVAE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSASD DLG N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSS 499
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T R L EE +K + +G + G LV C I ++D+NDN+P +I E+
Sbjct: 298 TTLRTLDFEE--IKKYSIVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHTLVENILEN 355
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
GT++ ++ D D G N ++
Sbjct: 356 AVPGTLIALIKIHDQDSGENGEV 378
>gi|62510884|sp|Q5DRD2.1|PCDB2_PANTR RecName: Full=Protocadherin beta-2; Short=PCDH-beta-2; Flags:
Precursor
Length = 798
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|395840235|ref|XP_003792969.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Otolemur garnettii]
Length = 788
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H+ V K G G L GT I + D NDN P FP S Y PE P GT + +
Sbjct: 229 HYXVVIQAKDMGGQMGGLSGTTTVNISLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRI 288
Query: 130 SASDADLGVNSKLSWNELEPNGL 152
ASDAD+G N+++ ++ + GL
Sbjct: 289 KASDADVGENAEIEYSITDGEGL 311
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFSSDLRVEWVINRSVDQH 170
FS + VDQ
Sbjct: 207 YFSVESETGXTCLYGVDQE 225
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 328 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVEDV-DEPPVFSKL 384
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 385 AYVLQIREDAQINTTIGSVTAQDPDASRN 413
>gi|354492231|ref|XP_003508253.1| PREDICTED: protocadherin gamma-A2-like [Cricetulus griseus]
Length = 814
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 61 LKRALRTEEHWLK--VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L+RAL EE + V GS P GTC + V D NDN P+F +Y +S+PE
Sbjct: 191 LERALDREEEAVHHLVLVALDGGSPVQP--GTCRIRVKVLDVNDNAPVFTQPEYRVSVPE 248
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+VPVGT + V+A+D D G N+++++ + + G
Sbjct: 249 NVPVGTRILTVTATDPDEGYNAQVTYFQEQAPG 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIV 97
F F + + + N Y+ V T RAL EE + + + G NP L + + V
Sbjct: 385 FPFKLERSVDN----YYRLVTT--RALDREEFSFYNITLSAKDGGNPS-LSTDTHLLLQV 437
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
D NDN P FP YS I E+ P GT + V A D D+ N+ ++++ E
Sbjct: 438 ADINDNPPSFPRGSYSAYISENNPRGTSIFSVLAYDPDINDNAHVTYSLAE 488
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E PG L T + V D NDN P F ++ + S+
Sbjct: 297 TITKSLDYEKAKFHEIDIE----AQDGPGLLTRT-KVVVTVLDVNDNAPEFYMTSATASV 351
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSS-DLRVEWVINRSVDQH 170
PED P GTV+ + + D D G N+ ++ + E+ P L S D V R++D+
Sbjct: 352 PEDSPPGTVIALFNVHDRDSGQNAVVTCSLPEMFPFKLERSVDNYYRLVTTRALDRE 408
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P F V + L I E G + + SA D D+G N+ L EL N FS D
Sbjct: 118 VTDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDVDVGENT-LQKYELNSNDHFSLD 176
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 177 VRTGADGNKYPELVLERALDRE 198
>gi|358413180|ref|XP_001787564.3| PREDICTED: protocadherin beta-17 [Bos taurus]
Length = 806
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT IIV D NDN P F Y + +PE+ P+G++
Sbjct: 202 REEQPELRLTLTAMDGGSP-PKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPENSPIGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G++ +LS++
Sbjct: 261 VITVSARDLDAGIHGELSYS 280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L G C I V D NDN P VS IPE+
Sbjct: 303 LKKKLDFEE--IRSYHMEIEASDGGGLSGKCTVAIEVMDVNDNAPELTVSLLINDIPENT 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD+D G N K+
Sbjct: 361 P-DTVVAVFGISDSDSGNNGKM 381
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 445 SVTVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 498
>gi|297295319|ref|XP_001092936.2| PREDICTED: protocadherin Fat 4-like [Macaca mulatta]
Length = 1704
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 1059 YPELALEKTLDREQQSYHRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 1117
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+ E+VP GT+V VSA+D D G+NS+++++
Sbjct: 1118 SLRENVPPGTIVLQVSATDQDEGINSEITYS 1148
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G P T + V D NDN P+F Y + + E+
Sbjct: 196 LQRALDREEEAAHHLVLTASDGGEPR-RSSTVRIRVTVLDTNDNAPVFAQPIYRVKVLEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VP GT + V+ASD D G+N K+++
Sbjct: 255 VPPGTRLLTVTASDPDEGINGKVAY 279
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+ E
Sbjct: 1272 GTLDRE-QTPEYNITITATDRGKP---PLSSSISVILHISDVNDNAPVFHQASYLVSVAE 1327
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+ P G + V ASD DLG+N ++S++ ++
Sbjct: 1328 NNPPGASIAQVCASDPDLGLNGQVSYSIMD 1357
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDNNP F V + I E G + A D D+GVNS S+ +L PN FS
Sbjct: 121 IEVIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSY-QLNPNHHFS 179
Query: 155 SDLRV--------EWVINRSVDQH 170
D++ E V+ R++D+
Sbjct: 180 LDVQTGDNGVINPELVLQRALDRE 203
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E+ + VE G + G LV C I ++D+NDN+P I E+ GT++
Sbjct: 1176 TKEYSMIVE-----GRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLI 1230
Query: 127 QVVSASDADLGVNSKLSWN 145
++ D D G N +++
Sbjct: 1231 ALIKIHDQDSGENGEVNCQ 1249
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
A+ F P +L +N G + A + + + + G L+G I V
Sbjct: 278 AYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLFISV 337
Query: 98 EDQNDNNP-IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
ED NDN P + S +S + +P GTV+ +S D D G N ++
Sbjct: 338 EDVNDNRPEVIITSLFSPVLENSLP-GTVIAFLSVHDQDSGKNGQV 382
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD G+NS KLS N
Sbjct: 991 IEDINDHTPTFTQNSFELQISESAQPGTRFILEVAEDADTGLNSLQKYKLSLN 1043
>gi|47551319|ref|NP_999838.1| cadherin-10 precursor [Gallus gallus]
gi|3023428|sp|P79995.1|CAD10_CHICK RecName: Full=Cadherin-10; Flags: Precursor
gi|1841296|dbj|BAA19130.1| cadherin-10 [Gallus gallus]
Length = 789
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP S L IPE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESSPVGTPIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
+ A+DAD G N+++ + ++ +G
Sbjct: 291 IKATDADTGKNAEVEYRIIDGDG 313
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D P+F S Y + ED+ +GT++ V A D D
Sbjct: 363 GPFKDTTIVKISVEDV-DEPPVFSRSSYLFEVHEDIELGTIIGTVMARDPD 412
>gi|431892552|gb|ELK02985.1| Protocadherin gamma-A2 [Pteropus alecto]
Length = 820
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLV--GTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L+RAL EE V + + G V GT ++V D NDN P+F +Y +S+PE
Sbjct: 196 LERALDREEE--AVHHLVLMALDAGDPVRSGTSRIRVMVLDVNDNAPVFTQPEYRVSVPE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+VPVGT + VV+A+DAD G N+++++
Sbjct: 254 NVPVGTRILVVTATDADEGYNAQVAY 279
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 63 RALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL E+ + T G NP L + + V D NDN P+FP + YS IPE+ P
Sbjct: 408 RALDREQFSSYNITVTAKDGGNPS-LSTDAHVLLQVADINDNPPMFPHTSYSAYIPENNP 466
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELE 148
G + V+A D D N+ ++++ E
Sbjct: 467 RGASIISVTAHDPDSDDNAHVTYSLTE 493
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G N+ L EL N FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKSAHDADVGENT-LQKYELNSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSAADGNKYPELVLERALDRE 203
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E PG L T + V D NDN P F ++ + SI
Sbjct: 302 TITKSLDYEDAKFHEIDIE----AQDGPGLLTRT-KVIVTVLDVNDNAPEFYMTSATSSI 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
ED P GT++ + + D D G N+ L+ +
Sbjct: 357 SEDSPPGTIIALFNVHDRDSGKNAFLTCS 385
>gi|410977824|ref|XP_003995300.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-19 [Felis catus]
Length = 772
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 197 FSIEPTTGIIRTSSKMDRELQ-DEYWVIIQAKDMLG-QPGGLSGTTSVLIKLSDVNDNKP 254
Query: 106 IFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S+ Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 255 IFKESKFYRLTVSEAAPTGTSIGKIMAYDNDIGENAEMDYS 295
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+A+DAD G N++L ++ L+
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTANDADDPSSGNNARLLYSLLQGQP 195
Query: 152 LFS 154
FS
Sbjct: 196 YFS 198
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 60 TLKRALRTEEHWL-KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL++++ E L + GS G L T I VED+NDN P SQ L PE
Sbjct: 8205 TLRKSVDYEMRTLYSIVVEAKDGSLHGSLQSTATVVITVEDKNDNTPQIETSQDVLFFPE 8264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSD-LRVEWVINRSVDQHTNK 173
+ PVG V+ + A D D G N KL++ N G+FS D L + I RS+D+ T K
Sbjct: 8265 NSPVGPVLAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQLSIVRSLDRETKK 8322
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
T+ R+L RT+++ +++ T GS P P N T VED NDN P+F S Y
Sbjct: 6576 TVVRSLDRERTDQYRFRIKATDL-GSPPSLPAYAFVNLT--VEDVNDNPPVFDRSSYQTR 6632
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
I E VG++V VSASDAD G N ++++ + N L
Sbjct: 6633 ITEGTDVGSIVASVSASDADSGSNGIVTYSIVSGNKL 6669
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
GT T+ V D+NDN P+F + +PE+V GTVV+ + A+D D G N +S++ +
Sbjct: 1190 GTAAVTVEVLDENDNAPVFNTTTVFADVPENVATGTVVETLKATDRDSGSNGDISYSIVS 1249
Query: 149 PN--GLFSSDLRVEWVINRSVD 168
N G F +D ++ S+D
Sbjct: 1250 GNSEGKFVADKTGNVIVVASLD 1271
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV-VSASDADLGVNSKLSWNEL 147
T T+ V D NDN P F S Y+ + E V VG+ V V VSA+DAD G N +L ++ +
Sbjct: 1503 ATARATVTVADANDNTPRFSRSLYAAGVSESVAVGSTVPVTVSATDADAGANGQLIYSIV 1562
Query: 148 --EPNGLFSSD-LRVEWVINRSVDQHT 171
NG F+ D + +S+D+ T
Sbjct: 1563 GGNINGAFNLDSATASLTVAKSLDRET 1589
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H++ + +GS T N T VED ND P+F QY PE+V ++V +V
Sbjct: 5047 HFVLSLEVRDRGSPSLTAATTVNVT--VEDVNDEAPVFTEIQYVFHAPENVSSNSIVGLV 5104
Query: 130 SASDADLGVNS--KLSWNELEPNGLFSSD-LRVEWVINRSVDQH 170
SA+D D G N+ K S E NG FS + E NR++D+
Sbjct: 5105 SATDNDAGTNAFVKYSITEGNANGTFSVNPFLGEIETNRALDRE 5148
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
P+ + +I V D NDN P+F + + E+V VGT+V +V+A+D DLG+N +++
Sbjct: 6286 PMSSSATVSIQVLDSNDNAPVFATKSQRVDLFENVTVGTLVALVNATDRDLGLNGVVAYM 6345
Query: 145 -NELEPNGLF 153
+P+G F
Sbjct: 6346 IETGDPDGRF 6355
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHW---LKVENTKHKGSNPGPLVGTCNTTI 95
F S+ F N T+ V T RAL E L V T G I
Sbjct: 8713 FRDSVTDFTLNSTS----GVVTTARALDRETKAIYNLTVIATD------GARSAEVTAII 8762
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V+D NDN P F S Y ++ E PVGTVV SASD D+G+N ++S+
Sbjct: 8763 TVQDDNDNAPEFAKS-YRANVSESAPVGTVVLTASASDRDVGINEEVSY 8810
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G+ + V D+NDN P+F + ++S+ ED P GT V +A+D D+G N ++++
Sbjct: 2731 PLTGSAQVKVTVSDENDNTPVFVNAVRNISLREDSPRGTEVATFTATDRDIGNNGLVTYS 2790
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
TL+RA+ E + L + + G +P L T ++ V D NDN P+F +++ +
Sbjct: 4929 TLQRAVDYESVTNYSLII--SASDGGSP-TLSSTAAVSVRVLDTNDNPPVFVGGPFTVKV 4985
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ PV T V VSA DAD G+N+ L+++
Sbjct: 4986 RENTPVSTSVFTVSAEDADSGINADLAYS 5014
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 44 AKFIANPTT-RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG-PLVGTCNTTIIVEDQN 101
++F N TT RLY + A T +L K G NP + + + V D N
Sbjct: 829 SQFSINSTTGRLYLTTALDREAKST---YLLTVTVKDVGDNPTVSDLASVQVIVFVADVN 885
Query: 102 DNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DN P+F P QY S+ ED+ VG V V+A D D G N ++ ++
Sbjct: 886 DNPPVFVPDGQYVASVGEDLAVGRTVIQVTAKDRDSGRNGQVRYS 930
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP--NG 151
T+ + D NDN+P+F S Y ++ E+ G +V +V+ASDAD G N+KL++ ++ N
Sbjct: 3608 TVTLLDVNDNSPVFNQSAYISAVSENALPGRIVTIVAASDADSGSNAKLTFRIIDGDRND 3667
Query: 152 LFS 154
+FS
Sbjct: 3668 VFS 3670
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
G ++ A + + + V N + + G L T TI + + N++ P+F +Y +SI
Sbjct: 4299 GIIEVARQLDHENVSVFNLTIEADDSGLPSLTATAALTIQIGNVNEHAPVFSQPEYEVSI 4358
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELE--PNGLFSSD 156
E +GT + VSASDAD G + ++S++ +E NG F+ D
Sbjct: 4359 YETAGLGTSIVRVSASDADDGSSGRVSYSLVEGNENGTFAVD 4400
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E + ++ G +P L G + V D NDN+P F ++Y ++ ED +G+V
Sbjct: 4624 REETGFYRLTVAAIDGGSPA-LTGNSIIAVNVLDVNDNDPRFQQAKYVFNVSEDALIGSV 4682
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V A D D G+N ++ ++ FS D
Sbjct: 4683 AGAVGAVDIDSGLNGQVKYSAPSSGRYFSVD 4713
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+ V D NDN P+F S Y++S+ EDV VG+ V SA+D D G N+ + +
Sbjct: 10203 TVTVLDVNDNKPLFEQSGYNVSVSEDVDVGSTVFTASAADNDEGRNAIVVY 10253
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ N TT + G + R L + ++ +T PG + T+ + D NDN P
Sbjct: 9534 FVVNATTGVISVSGDIDRELNSSFTFVVTASTIAGNVPPG----SATVTVTIADINDNTP 9589
Query: 106 -IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ P++ + +P + VG+ + V+ A+D D GVN KLS++ + N
Sbjct: 9590 QVDPLT--TAFVPFNATVGSHIVVIQATDPDAGVNGKLSFSIVSGN 9633
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT I+ D NDN P F S + + E+ +G+ V ++SA+D D G+N+ ++++
Sbjct: 8547 LTGTATVAAILLDVNDNAPTFTQSVFVGRVEENATLGSSVLLLSATDRDTGLNADVTFSI 8606
Query: 147 L--EPNGLFS-SDLRVE-WVINRSVDQHTNK 173
L + +G F SD+ V+N S+D+ + K
Sbjct: 8607 LSGDEDGAFRLSDVTSGLLVVNGSLDRESRK 8637
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 49 NPTTRLYKNVGTLKRALRTEEHWLKVE----NTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
NP T + GTL R T ++ L VE + SN + I+VED ND+
Sbjct: 2593 NPGTGVLSTKGTLDRE-STSQYDLIVEAFDLGVPSRSSN-------SSVRIMVEDVNDSP 2644
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV----- 159
P F Y +I E P G VQ+V A D D G N+ ++ L SS R+
Sbjct: 2645 PTFSQFLYVATISEAAPAGADVQIVEAIDGDAGSNAVFLYSLRV--SLDSSAFRINGRSG 2702
Query: 160 EWVINRSVDQHT 171
+ +NR VD+ +
Sbjct: 2703 QIQLNRKVDRES 2714
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ +ED NDN+P+F + Y ++ E TV+ VSA+D D G N ++ ++ L P+G+F
Sbjct: 2429 VTIEDVNDNSPVFDEAAYVFNVTEMAAAFTVLGRVSATDKDSGSNGQILYS-LTPSGVF 2486
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF N +T + L R R++ + LK++ G P L G + V D ND
Sbjct: 6142 GKFGVNASTGQVTLLEPLDRENRSQ-YSLKIQ--ASDGGLPS-LSGEITIFVTVTDVNDE 6197
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSD 156
P+F + Y SI E+ VG +V V A+DAD G N +S++ N G F+ D
Sbjct: 6198 APLFTEASYLASIAENASVGDLVFTVRANDADEGTNGLVSYSIRSGNRDGQFTVD 6252
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-----LGVNSKLSWNEL--EPNGLF 153
NDN PIF +Y S+ E V +GT V VSA+D D G + + +++ +P+G+F
Sbjct: 2321 NDNPPIFGAPKYDFSVKEGVSIGTEVGKVSAADGDSSLGLFGSDGFVEYSKFSGDPDGIF 2380
Query: 154 SSDLRVEWVI-NRSVDQH 170
S D ++ N S+D+
Sbjct: 2381 SVDASSGSIVTNTSLDRE 2398
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I + D NDN+P+F Y S+ E+V VG+ + V A+D D+G N + ++
Sbjct: 4859 ITIADVNDNSPVFETLLYDFSLYENVSVGSTLGTVKATDDDIGANGDILYS 4909
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 60 TLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
TL AL E E++ V ++ S+ L + I V D NDN PIF Y I
Sbjct: 8415 TLAAALDFERVENYQLVITARNPSSSSSILPRSATVNIAVLDVNDNAPIFDQMFYRWEIL 8474
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
E+V +G V A+DAD G+NS + ++ + + F+ D R
Sbjct: 8475 ENVTIGKAGFSVQATDADSGINSLIRYSLTDASSTFTIDHR 8515
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
I + L +V L R L+T + L V + +GS P L+ + T+ V D NDN P+
Sbjct: 2488 IGRSSGTLTLSVANLDRELKTR-YSLTV-TARDRGS-PA-LLTSVGVTVDVLDINDNAPV 2543
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
F +Y ++ E GT + ++A+D D G+N ++ + + P S+DL V
Sbjct: 2544 FSKQRYVGNVSEAASKGTAILGLTATDLDSGLNGQVRYRLVPP----SNDLDV 2592
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 91 CNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
NTTI V D NDN P F VS + +I E + VG + V A+DAD G N +S++ +
Sbjct: 10505 ANTTIEVALIDVNDNKPRFAVSMVTKTISETMSVGAEIVQVPATDADSGANGIVSYSIVT 10564
Query: 149 PNG 151
N
Sbjct: 10565 GNA 10567
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V D +DN P+F + Y+ S ED +G + VSA+D D GVN+K+ +
Sbjct: 8346 INVTDIDDNIPVFNQTIYNASASEDAGLGNSIVTVSATDGDRGVNAKILY 8395
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E + L VE + +GS L T I V D NDN P F YS ++ E
Sbjct: 3682 GDLDREI-IEGYSLTVE-ARDQGSPS--LRNTTLVNITVADINDNFPEFARLAYSEAVKE 3737
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFSSDLRVEWVINRSVDQHT 171
++ +G+ + +SA D D G N + + + +G+F V +S+D T
Sbjct: 3738 NISIGSTITTLSAEDLDAGSNGDVHYVLGSGDEDGVFKLSDAGSLVTVKSLDHET 3792
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
D NDN P + Y S+ E+ P GT V V A+D D+G N ++++ + LF+ D
Sbjct: 1410 DVNDNTPQLEKANYEASVVENSPTGTSVLTVKATDDDIGSNGAVTYSLSPSSSLFNID 1467
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
D NDN P+F + Y+ ++ E VGT V V A+D D G+N+ +S++ + N
Sbjct: 991 DINDNAPLFQKAVYTATVSESFSVGTSVVQVKATDLDTGLNALVSYSFVNGN 1042
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N T++V+D NDN+P F S Y S+ E V V ASD+D+G N +++
Sbjct: 5965 GLFSAVSNLTVVVDDVNDNSPQFNASSYFASLSEGGGANRPVITVLASDSDVGENGSVTY 6024
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDA-DLGVNSKL 142
GT I VED NDN P+F Y S+ E G V VV A DA D G N+++
Sbjct: 3908 GTALVQITVEDINDNPPVFERDIYRFSVAEGSGTGLQVGVVRAKDAKDAGSNARI 3962
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL---EPNGLFSSDLRVEW 161
P+F S Y++S+ ED VG + V A+D D GVN +L++ L + N F +L
Sbjct: 8145 PLFTQSVYNVSLREDSVVGIRIITVVAADNDTGVNGQLAYRILTGNDNNTFFLDELSGNL 8204
Query: 162 VINRSVD 168
+ +SVD
Sbjct: 8205 TLRKSVD 8211
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + + + D NDN+P F + +++ + E V + +V+ V A+D+D G+N + +
Sbjct: 6497 PLSSSVTVNVSIVDLNDNSPRFETNAFTVDVKESVSLTSVIASVKATDSDSGLNGDVVY 6555
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G++ PL T + V D ND+ P F + Y + E VG V ++ASD D+G N
Sbjct: 1079 GNSVKPLSSTVTLNVAVTDSNDHAPSFSANVYRAVLNESAGVGFSVLQLTASDPDVGTNG 1138
Query: 141 KLSWN 145
+++++
Sbjct: 1139 QIAFS 1143
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDA-DLGVN 139
GS+ L + T++V D ND++PIF Y + ED VG+ V V A D D+GVN
Sbjct: 4217 GSDGRFLRSSAAVTVVVLDVNDHSPIFSDFLYKFLVSEDASVGSSVGRVEAIDTNDVGVN 4276
Query: 140 SKL 142
+ +
Sbjct: 4277 AAI 4279
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 59 GTLKRALRTEEHWLKVENTK-HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
G+L R R + H +V+ H G L T + + + ND +P+F YS SI
Sbjct: 8629 GSLDRESR-KRHVFEVQVANIHPGVQQSVLFDTAFVNLTISNVNDESPVFSSLLYSASIL 8687
Query: 118 EDVPVGTVVQVVSASDAD 135
E+ P G + VSASD D
Sbjct: 8688 ENRPPGQSLVTVSASDKD 8705
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF+A+ T + V +L + E+ L VE G NP L N + V D NDN
Sbjct: 1254 GKFVADKTGNVIV-VASLDFE-KIREYRLGVE--ARDGGNP-QLSAVGNLVVTVVDVNDN 1308
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
+P+F S ++ S+ E+V +GT V V ASD D G+N+ +S++ + N F+ +VI
Sbjct: 1309 DPLFSSSVFTTSVDENVAIGTSVFAVVASDDDSGLNAIVSYSIVAGNSDFA------FVI 1362
Query: 164 NRSVDQHT 171
N + + T
Sbjct: 1363 NSTSGELT 1370
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L T + T+ V D NDN P F V SL + E+ PVG+ + ++A+D D G + ++++
Sbjct: 6392 LQSTASITVNVLDVNDNAPRFSVPPGSLFLNENEPVGSSLAFITATDEDNGRSGQVTY 6449
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 93 TTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
TT++V D NDN P F YS SI E+ VG V V A D D G N + + N
Sbjct: 4017 TTVVVNITDVNDNAPEFTRRTYSASILENSTVGQFVLSVQAEDVDSGANGLVRYELSSGN 4076
Query: 151 --GLFSSD 156
G FS D
Sbjct: 4077 VGGTFSID 4084
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G + V D ND P F S +++ E VP+G + VSA D D G+N ++
Sbjct: 4539 LTGYATLFVTVGDVNDREPSFLSSFKEVNVSEGVPIGFEITQVSAEDTDAGLNGVVTAYN 4598
Query: 147 LEP---NGLFS 154
L +G+FS
Sbjct: 4599 LTKGNFDGVFS 4609
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
NDN P F + ++ I E G+ + VSASDAD G N+ L ++ LE G
Sbjct: 6087 NDNRPQFTPATLNVKISEAAVPGSQITTVSASDADSGDNAVLQYSVLETVG 6137
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F N T+ + +L R + + L VE + + S G + I V D NDN+
Sbjct: 9949 EFSVNSTSGDIILIDSLDRE-KVVSYRLVVE-AETRSSFGGVAAASVEVNITVLDANDNS 10006
Query: 105 PIFPV-SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PI V S+ + PVG ++ + ASD D G N KL +
Sbjct: 10007 PIASVVGNASVQLNSSSPVGVLIAQILASDNDAGPNGKLLY 10047
>gi|344265062|ref|XP_003404606.1| PREDICTED: protocadherin beta-16-like [Loxodonta africana]
Length = 797
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E ++ T G +P P GT + V D NDN P F + Y
Sbjct: 189 RKYPELVLDKELDREEGPEFRLTLTALDGGSP-PRSGTTQVRVEVVDINDNAPEFEQALY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPED P G++V VSA D D GVN K+S+ +P+ S L V E + V
Sbjct: 248 KVQIPEDSPTGSLVVTVSARDLDSGVNGKVSYTLFQPSEDTSKILEVNPTTGEIQLTTQV 307
Query: 168 DQHTNK 173
D T +
Sbjct: 308 DYETTR 313
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
CN ++V D NDN P F + Y+L I E+ + VSA+D D G N++++++ L P
Sbjct: 435 CNIMVLVSDVNDNAPTFTQTSYTLFIRENNSPALHMGSVSATDRDSGSNAQVTYSLLPPQ 494
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 49 NPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
NPTT G ++ + + + + ++ G L G C + V D NDN P
Sbjct: 295 NPTT------GEIQLTTQVDYETTRSYEVDIEATDGGGLSGKCTLLLQVVDVNDNAPEVT 348
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
VS + IPE+ P TVV V S SD D G N K
Sbjct: 349 VSALTSPIPENSP-ETVVAVFSVSDPDSGDNGK 380
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V D ND++P+F + L I E+ P+G+ + +A D D+G N+ + E+ PN F
Sbjct: 123 VRDINDHSPVFTEREMVLKILENSPLGSAFPLKNALDLDVGSNNVQKY-EISPNSHFRVL 181
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SD R E V+++ +D+
Sbjct: 182 TSNRSDGRKYPELVLDKELDRE 203
>gi|332234714|ref|XP_003266550.1| PREDICTED: protocadherin beta-2 isoform 1 [Nomascus leucogenys]
Length = 797
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P GT I V D NDN P F Y + IPED
Sbjct: 197 LNRALDREEQPEIRLTLTALDGGTP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 256 SPVGSQVAIVSAKDLDIGTNGEISY 280
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 279 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 338
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P VS IPE++ T++ V S SD D G N ++
Sbjct: 339 MDLNDNPPELTVSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 382
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T++V D NDN P F + Y+L + E+ + V A+D D G N++++++ L P
Sbjct: 437 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVKATDRDSGTNAQVTYSLLPPQD 496
Query: 152 L 152
L
Sbjct: 497 L 497
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR-------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGILPQLVLNRALDRE 204
>gi|149640370|ref|XP_001507525.1| PREDICTED: protocadherin beta-11-like [Ornithorhynchus anatinus]
Length = 796
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ + + T G P P GT + V D NDN P F +Y + IPE+
Sbjct: 196 LDKALDREEQAEIHLTITALDGGTP-PRSGTAKVHVFVVDVNDNAPEFSQKRYEVQIPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+G+V VSASD D+GVN ++++
Sbjct: 255 SPLGSVATAVSASDFDVGVNGEIAY 279
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V+D ND++P+F +L+I E+ PVG+ ++ SA D D+G NS L + PN F
Sbjct: 121 ISVDDVNDHSPVFLDIDMTLNILENSPVGSEFEIQSAQDFDVGKNS-LQEYVISPNSYFH 179
Query: 155 SDLR--------VEWVINRSVDQH 170
R E V+++++D+
Sbjct: 180 ISTRNQSDGQKFPELVLDKALDRE 203
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI PT + + T + R + V T +P L N +++ D NDN P
Sbjct: 391 FILKPTFENFYTLVTDRPLDRESQSQYNVTITVTDMGSPS-LKTEQNIIVLISDVNDNPP 449
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+F + Y+L I E+ + V A D+D G+N+++++ L P
Sbjct: 450 MFNQTSYTLYIRENNSPALHIGSVCAVDSDSGLNARVTYTLLSP 493
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L G C V D NDN P +S IPE+ P TVV + S SD D G N
Sbjct: 320 QAKDGGGLSGKCTVRFQVADINDNTPELTISSVISPIPENDP-ETVVAIFSISDRDSGNN 378
Query: 140 SKL 142
++
Sbjct: 379 GRM 381
>gi|395817389|ref|XP_003782154.1| PREDICTED: protocadherin gamma-A5 [Otolemur garnettii]
Length = 814
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + ++V D NDN P+F S+Y +S+PE++P+GT + ++A+D D
Sbjct: 213 TALDGGDP-VLSGTTHIHVMVLDANDNAPLFTQSEYKVSVPENIPIGTQLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 51 TTRLYKNVG---TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T +L N+G T++ E + +E G G L+ + + V+D NDN P
Sbjct: 291 TFQLDSNLGEISTMQSLDYEESRFYLMEVVAQDG---GALLASAKVLVSVQDVNDNAPEV 347
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++ + S+ ED GTV+ + D D G N +++ +
Sbjct: 348 ILTSLTSSLSEDCLPGTVIALFRVHDGDSGENGEITCS 385
>gi|297295290|ref|XP_001090236.2| PREDICTED: protocadherin beta-16-like isoform 2 [Macaca mulatta]
Length = 796
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P +GT + I++ D NDN P F Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRIGTSHVLIVIVDINDNVPEFTQRLYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 256 APIGSLVITVSARDLDAGTHGELSYS 281
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S IPE+
Sbjct: 304 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDIPENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKM 382
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITVRVSDVNDNAPAFTQTSYNLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|449481209|ref|XP_004177258.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Taeniopygia guttata]
Length = 2675
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P + + + ++ R +E H + N +G +PGP T I VED+NDN P
Sbjct: 120 FEIDPRSGVVRTRASVDREEVSEYHLVVEAN--DQGKDPGPRSATAMVHITVEDENDNYP 177
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
F +Y + +PED PV + + V A+D D G N+++ ++ + N
Sbjct: 178 QFSEKRYLVQVPEDAPVNSQILQVQATDRDRGSNAQVHYSIVSGN 222
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ H LKV + H +P T T+ V D ND+ P+F +Y SI E++ VG V
Sbjct: 34 DTHVLKVTASDH--GSPRRRSATTYLTVTVSDTNDHEPVFEQPEYRESIRENLEVGYEVL 91
Query: 128 VVSASDADLGVNSKLSWNELEP---NGLFSSDLRVEWVINR-SVDQ 169
+ A+D D N+ + + LEP +G+F D R V R SVD+
Sbjct: 92 TIRATDGDAPANANMLYRLLEPGAGDGVFEIDPRSGVVRTRASVDR 137
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + + V D NDN P+F ++ + + E+ PVG++V +SA+D D G N+++ +
Sbjct: 691 PLKASVDIQVTVLDINDNPPVFEKDEFDIFVEENSPVGSIVARISAADPDEGTNAQIMYQ 750
Query: 146 ELEPN--GLFSSDL 157
+E N +F DL
Sbjct: 751 IVEGNIPEVFQLDL 764
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G T I V D N + P+F S Y++S+ ED P+GT + +SA+D D G N+++++
Sbjct: 481 GTRFDTVQVFINVTDANTHRPVFQSSHYTVSVSEDKPIGTSIVTISATDEDTGENARITY 540
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F +Y S+ EDVP+ T V +SA+D D G+N +L +
Sbjct: 594 ILILDANDNAPRFLRDRYQGSVFEDVPLSTSVLQLSATDRDSGLNGRLLY 643
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCN-TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ L+++ G P PL+ + ++ V D NDN PIF + + ++ E+VP+G V
Sbjct: 249 EYTLRIK--AQDGGRP-PLINSSGMVSVQVVDVNDNAPIFVSTPFQATVLENVPLGYSVL 305
Query: 128 VVSASDADLGVNSKLSWNELE 148
+ A DAD G N++L + +E
Sbjct: 306 HIQAVDADSGENARLEYKLIE 326
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 21 LESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHK 80
LE + + + P +G AP S F N +T L R E + VE H
Sbjct: 320 LEYKLIEMAPSTGG-APVAGDSGFPFQINNSTGWITVAAELDRET-VENYHFGVEARDH- 376
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ + + +I V D NDNNP F Y L + ED VG+ V ++A D D VNS
Sbjct: 377 --GVPVMTSSASVSITVLDVNDNNPTFTEKVYHLRLNEDAAVGSSVLTLTAVDRD--VNS 432
Query: 141 KLSW 144
+++
Sbjct: 433 VVTY 436
>gi|47227102|emb|CAG00464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2970
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ + L+V+ T G G L N TI+V D NDN P+F Y +++PEDV VGT V
Sbjct: 1947 DSYRLRVQATDQAGQR-GALSTQVNLTILVLDVNDNAPVFQRRDYGVTVPEDVAVGTEVL 2005
Query: 128 VVSASDADLGVNSKLSW 144
V A+ D+G+N+++S+
Sbjct: 2006 RVLATSVDIGLNAEISY 2022
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
C+ +I+ D+NDN P F +Y +SI +V G++V + ASD D G N +++++
Sbjct: 1331 CSVRVILADENDNPPRFRAVEYRMSIKANVAKGSLVTQIQASDPDAGSNGRITYS 1385
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ W + T ++ G V + V D NDN PI + YS S PED+PV
Sbjct: 1741 REQQDWYLLNIT----ASDGLYVAHTAVEVTVMDANDNRPICNQAVYSASFPEDIPVNKG 1796
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V+A+DAD G ++++ ++
Sbjct: 1797 ILTVAATDADSGSSAEIQYS 1816
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE- 146
V T + + + D NDNNP+F + Y ++ E +P+GT V V A D D G N ++ + E
Sbjct: 1543 VTTVDLEVKILDVNDNNPLFETNTYVATVMEGMPIGTRVVQVRALDPDWGANGQVCYVEA 1602
Query: 147 ------LEPNGLFSSDLRVEWVINRSVDQH 170
+ + +F+ D + W+ S H
Sbjct: 1603 ASSDGPITSSSVFAIDSKTGWITTVSEMDH 1632
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
++++L +E G NP PL TI + D NDN P F Y++ + ED VG +V
Sbjct: 2053 CKDYYLTIE--AWDGGNP-PLSSATVVTIDLMDVNDNAPTFSQDIYNVLVSEDASVGQMV 2109
Query: 127 QVVSASDADLGVNSKLSWNELE 148
VSA D D N +++++ L+
Sbjct: 2110 TRVSAEDLDSQGNGRITYSILK 2131
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L VGTL A + V N + ++ G T I V+D NDN P+F Y
Sbjct: 121 LQVGVGTLIVAKPLDAEVQSVYNMTVQVTD-GTNFATAQVFIRVQDGNDNPPVFSQPAYD 179
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+S+ ED+PV + V ASD D
Sbjct: 180 VSVSEDIPVDMELVRVRASDMD 201
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ VED NDN P F + Y E P GT V V+A D D G+N +L++
Sbjct: 267 VAVEDSNDNIPYFTSTVYDAVAYESSPFGTSVLQVTALDKDNGINGQLTY 316
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
N G L+ A + + ++ G L + ++ V D NDN P F Y S+
Sbjct: 1830 NTGELRTATIMDRETTPSYKLIAQATDGGGLFCRSDISLKVLDVNDNAPTFSSPHYLASV 1889
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD-LRVEWVINRSVDQHTN 172
E+ ++ + ASD D G+N L + + LFS D + V+ +S+D+ +
Sbjct: 1890 YENAAPKALLTRLQASDPDEGLNRTLVYTLDSIDELFSIDPVSGMVVLEKSLDRESQ 1946
>gi|395510895|ref|XP_003759703.1| PREDICTED: cadherin-20 [Sarcophilus harrisii]
Length = 630
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +GL + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGLDTFDINTD 327
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
>gi|395504784|ref|XP_003756727.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 840
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 12/91 (13%)
Query: 61 LKRALRTEEHWLKVENTKH------KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
L++AL EE E+ H G +PG L GT ++V D NDN P+F S YS+
Sbjct: 195 LEKALDREE-----ESVHHLLLKAWDGGDPG-LSGTARIRVLVLDANDNAPVFTQSVYSV 248
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+PE++P G+++ V+A+D+D GVN +++++
Sbjct: 249 SVPENLPKGSLLLWVNATDSDEGVNGEVTYS 279
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L +L EE K+ + +G + G L+ + I V D NDN P V+ ++ S+PE+
Sbjct: 302 LVESLDYEES--KIYEMEIQGQDGGGLMTSAKVLIRVLDVNDNAPEVMVTSFTSSVPENS 359
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P GTVV ++ D D G N ++ +
Sbjct: 360 PPGTVVALLKVHDQDSGDNGHVTCS 384
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 40 TFSIAKFIANPTTRLYKNVGTL--KRALRTEEHWLKVENTKHKGSNPG-PLVGT-CNTTI 95
T SI+ + + Y N TL RAL E+ + + N ++ G PL+ T +
Sbjct: 382 TCSISGQLPFKLEKSYANYYTLVIDRALDREQ--ISMYNVTVTVTDQGTPLLSTDTYIPL 439
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
VED NDN+P F + YS I E+ G+ + V+ASD D N++L+++
Sbjct: 440 QVEDINDNSPSFGQTSYSAYIHENNARGSSIYSVTASDPDTKENAQLTYS 489
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS-------IPEDVPVGT 124
L+++ T G +P PL + T+ + DQNDN P S + P G
Sbjct: 527 LQLQITVKDGGDP-PLSSNVSLTLFILDQNDNAPEILYSTFPTDGSTGVELAPRSAESGY 585
Query: 125 VVQVVSASDADLGVNSKLSWNEL---EPNGLFSSDL 157
+V V A D D G N+ LS+ L EP GLFS L
Sbjct: 586 LVTKVVAVDGDSGQNAWLSYRLLKVTEP-GLFSVGL 620
>gi|119514227|gb|ABL75890.1| protocadherin 2G15 [Takifugu rubripes]
Length = 933
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P
Sbjct: 185 KELDREKQHELNLQLTALDGGSPQ-RSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSP 243
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINR 165
+ TVV VSA+DAD GVN ++++ G S D++ + I+R
Sbjct: 244 LDTVVMQVSATDADEGVNGDVTYD----FGHVSDDVKKIFSIDR 283
>gi|402872807|ref|XP_003900293.1| PREDICTED: protocadherin beta-17-like [Papio anubis]
Length = 796
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P +GT + I++ D NDN P F Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRIGTSHVLIVIVDINDNVPEFTQRLYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 256 APIGSLVITVSARDLDAGTHGELSYS 281
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL EE ++ + + + S+ G L G C I V D NDN P +S IPE+
Sbjct: 304 LKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDIPENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKM 382
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITVRVSDINDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|332234716|ref|XP_003266551.1| PREDICTED: protocadherin beta-2 isoform 2 [Nomascus leucogenys]
Length = 795
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P GT I V D NDN P F Y + IPED
Sbjct: 195 LNRALDREEQPEIRLTLTALDGGTP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 254 SPVGSQVAIVSAKDLDIGTNGEISY 278
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 277 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 336
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P VS IPE++ T++ V S SD D G N ++
Sbjct: 337 MDLNDNPPELTVSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 380
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T++V D NDN P F + Y+L + E+ + V A+D D G N++++++ L P
Sbjct: 435 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVKATDRDSGTNAQVTYSLLPPQD 494
Query: 152 L 152
L
Sbjct: 495 L 495
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 123 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 181
Query: 157 LR-------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 182 LQDSLDGILPQLVLNRALDRE 202
>gi|73945807|ref|XP_541068.2| PREDICTED: cadherin-19 [Canis lupus familiaris]
Length = 770
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G PG L GT + I + D NDN P
Sbjct: 196 FSIEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIGL-PGALSGTTSVLIKLSDVNDNKP 253
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF Y L++ E P GT + + A D D+G N+++ ++
Sbjct: 254 IFKERLYRLTVSESAPTGTSIGRIMAYDNDIGENAEMDYS 293
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT+V V+A+DAD G N++L ++ L+
Sbjct: 135 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTATDADDPASGNNARLLYSLLQGQP 194
Query: 152 LFS 154
FS
Sbjct: 195 YFS 197
>gi|327270465|ref|XP_003220010.1| PREDICTED: protocadherin alpha-5-like [Anolis carolinensis]
gi|262263268|tpg|DAA06571.1| TPA_inf: protocadherin alpha 12 unspliced isoform [Anolis
carolinensis]
Length = 816
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PLVG CN I V D NDN P V+ S+ +PED PV TVV ++SASD D G N ++S +
Sbjct: 323 PLVGHCNVIIEVIDVNDNIPDVSVTSLSVPVPEDSPVETVVALISASDKDSGPNGQVSCS 382
Query: 146 ELEPNGL 152
L P GL
Sbjct: 383 -LWPPGL 388
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L E+ H L + T G P L GT I V D NDN P+F S Y++ +
Sbjct: 190 LKKPLDREQVPVHHLVL--TATDGGQP-ELTGTVQLQITVMDANDNAPVFNQSFYNVKLL 246
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ GT+V ++A+D D G N ++S+
Sbjct: 247 ENAMEGTLVINLNATDLDEGPNKEISY 273
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V+D NDN P+F + +LSIPE V G + ASD D+G N++L +
Sbjct: 117 VKDVNDNAPLFSEGEEALSIPESVLPGAQFPLEGASDGDVGTNAQLKY 164
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L + + + D NDN P+F Y++ + E+ P G + VSASD D+ N+ +++
Sbjct: 430 LSASITLVVPIGDVNDNAPVFAHPSYTVFVKENNPPGAHIFTVSASDPDMAENALVTY 487
>gi|403256572|ref|XP_003920943.1| PREDICTED: protocadherin beta-2 [Saimiri boliviensis boliviensis]
Length = 529
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P GT I V D NDN P F Y + +PED
Sbjct: 198 LDRALDREEQPEIRLTLTALDGGTP-PKSGTALVRIEVVDINDNVPEFAKPLYEVQVPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D+G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDIGTNGEISY 281
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S + IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLTNQIPENLQ-DTIIAVFSVSDQDSGDNGRM 383
>gi|402872797|ref|XP_003900288.1| PREDICTED: protocadherin beta-2 [Papio anubis]
Length = 798
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGTP-PRSGTALVRIEVMDINDNFPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+G+ V +VSA D D+G N ++S+
Sbjct: 257 SPIGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQTLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
D NDN P +S + IPE++ ++ V S SD D G N +
Sbjct: 340 MDLNDNPPELTMSTFINQIPENLQ-DALIAVFSVSDPDSGDNGR 382
>gi|14009465|gb|AAK51618.1|AF217751_1 protocadherin-psi1 [Homo sapiens]
Length = 587
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I++ D NDN P F +Y + +PE+
Sbjct: 197 LDQALDREEQPQLRLTLTALDGGSP-PRTGTSQVLIVIVDINDNVPEFAQRRYEVQVPEN 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA D D G + +LS++
Sbjct: 256 TPIGSLVITVSARDLDAGTHGELSYS 281
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
K+AL EE ++ + + + S+ G L G C I V D NDN P +S I E+
Sbjct: 304 FKKALDFEE--IQSYHMEVEASDGGGLSGKCTVAIEVMDINDNAPELTMSLLISDILENS 361
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 362 P-ETVVAVFGISDPDSGNNGKM 382
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NITLRVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|444713182|gb|ELW54090.1| Protocadherin beta-8 [Tupaia chinensis]
Length = 700
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E L++ T G +P P G+ I V D NDN P F Y + IPED
Sbjct: 197 LDKALDREAEPELRLTLTARDGGSP-PRSGSTQVYIEVVDVNDNAPEFEQPFYRVQIPED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G +V VSA+DAD+G N +++++
Sbjct: 256 SPIGFLVVTVSATDADIGANGEITYS 281
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+DAD G N++++++ L P+
Sbjct: 439 TVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPH 495
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L G C + D ND+ P VS ++ IPE+ VV V S SD D N
Sbjct: 321 EAKDAGSLSGKCTVLTRITDVNDHAPEITVSAFTSPIPENA-AEIVVVVFSVSDLDSEHN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKVSCS 385
>gi|297261317|ref|XP_001111116.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Macaca
mulatta]
Length = 3002
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E+ L VE +G NPGPL T I VED+NDN P F Y + +PEDV + T V
Sbjct: 509 EYQLLVE-ANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLR 567
Query: 129 VSASDADLGVNSKLSWNEL 147
V A+D D G N+ + ++ L
Sbjct: 568 VQATDRDQGQNAAIHYSIL 586
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 815 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 874
Query: 150 NGLFSSD 156
F D
Sbjct: 875 VPQFRID 881
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H L+V+ + S P P T T++V+D ND++P+F S+Y + E++ VG V
Sbjct: 404 ETHVLRVKAVDY--STP-PRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVL 460
Query: 128 VVSASDADLGVNSKLSWNEL 147
+ ASD D VN+ L + L
Sbjct: 461 TIRASDRDSPVNANLRYRVL 480
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N+++
Sbjct: 1018 SPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPNAQI 1077
Query: 143 SWNELEPN-------GLFSSDLRV 159
+ +E + L + DLR
Sbjct: 1078 MYQIVEGDMRHFFQLDLLNGDLRA 1101
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++ V D NDN PIF S + ++ E+VP+G V + A DAD G N++L + ++ F
Sbjct: 595 SVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSGENARLHYRLVDTASAF 654
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 923 ILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 972
>gi|47220946|emb|CAG03479.1| unnamed protein product [Tetraodon nigroviridis]
Length = 681
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 3 LNLIGKGYEYNHWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLK 62
+L G+ E+ W+IS +LE++ +S + P + K + Y+ + +
Sbjct: 226 FDLRGRAEEF-RWNISDMLENQ---TAAESFHWWPMVLLLLVK---HHVQYYYRFTSSQE 278
Query: 63 RALRT---------EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
R +RT EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 279 RIIRTALADMDREAREHYTVVIQAKDMAGQVGGLSGSTTINITLTDINDNPPKFPQKNYQ 338
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE VG V + A+D DLG+N+ + ++ + G
Sbjct: 339 LYVPESAQVGKPVGKIKANDEDLGINADIKYSIINSEG 376
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P FP + ++PE VGT V V+ASDAD G ++++ ++ L+
Sbjct: 148 IKVQDINDNAPKFPDGPFVATVPEMSEVGTSVLQVTASDADDPTYGNSARIVYSILQGQP 207
Query: 152 LFSSDLRVEWVINRS 166
FS D + +NR+
Sbjct: 208 YFSVDPK---TVNRT 219
>gi|348561957|ref|XP_003466777.1| PREDICTED: cadherin-18-like [Cavia porcellus]
Length = 751
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD+G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADIGSNADMTYSIINGDGI 313
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|326672581|ref|XP_003199698.1| PREDICTED: cadherin-18-like, partial [Danio rerio]
Length = 654
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 214 FSVDPKTGIIRTALADMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 271
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y + +PE VG V + A+D D+G+N+++ ++ L P G
Sbjct: 272 PKFPQKNYQVFVPESAQVGKPVGKIKANDEDIGINAEIKYSILNPEG 318
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P FP + S+PE +GT V V+A+DAD G ++++
Sbjct: 144 PLEPESEFIIKVQDINDNAPKFPDGPFVTSVPEMSELGTSVFQVTATDADDPTYGNSARV 203
Query: 143 SWNELEPNGLFSSD 156
++ L FS D
Sbjct: 204 VYSVLHGQPYFSVD 217
>gi|194219820|ref|XP_001502241.2| PREDICTED: protocadherin beta-15 [Equus caballus]
Length = 795
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ L++ T G +P P GT I+V D NDN P F + Y
Sbjct: 189 RKYPELVLDKELDREEQAELRLTLTALDGGSP-PRSGTAQVRILVLDVNDNAPEFAQTLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ +PE+ PVG +V VSA D+D G N ++S+
Sbjct: 248 QVQVPENSPVGALVVKVSARDSDSGTNGEISY 279
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+G ++V+D ND++P FP + +L IPE P GTV + A D D+G N+ + ++
Sbjct: 114 LGVFRAELLVKDINDHSPEFPEREMTLKIPESSPPGTVFPLKKAQDLDVG-NNNIQNYDI 172
Query: 148 EPNGLFSSDLR--------VEWVINRSVDQH 170
PN F R E V+++ +D+
Sbjct: 173 NPNSHFHVSTRDRGDGRKYPELVLDKELDRE 203
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + VSA+D D G N++L+++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDRDAGANAQLTYSLLPPQ 494
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ I V D NDN+P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVAIEVVDVNDNSPELTISSLTSPIPENSP-ETEVALFRIRDRDSGDN 378
Query: 140 SKLSWN 145
+++ +
Sbjct: 379 GRMTCS 384
>gi|334311089|ref|XP_001377821.2| PREDICTED: protocadherin gamma-A4-like, partial [Monodelphis
domestica]
Length = 835
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLV--GTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L+RAL EE V + S+ G V GT + + V D NDN P+F S Y++S+PE
Sbjct: 196 LERALDREEE--PVHHLTLIASDGGDPVRSGTVHICVTVLDANDNTPVFTQSLYTVSVPE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+VPVGT + V+A+D D G+N K+++
Sbjct: 254 NVPVGTWLLTVNATDPDEGINGKINY 279
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + ++ +ED NDN P F + YS I E+ P GT + ++A D+D+G N +
Sbjct: 429 NP-PLSTDTHISLHIEDINDNPPAFIQTVYSAYIMENNPRGTSIYSLTAHDSDIGENGHV 487
Query: 143 SWNELE 148
S++ E
Sbjct: 488 SYSIAE 493
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSI-----PEDVPVGT 124
LK+ T NP PL + T+ + DQNDN P ++P S P G
Sbjct: 528 LKLRVTARDSGNP-PLSSNVSLTLFILDQNDNTPEILYPTLPTDGSTGVELAPRSAEPGY 586
Query: 125 VVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
+V V A DAD G N+ LS+ ++ GLFS L
Sbjct: 587 LVTKVVAVDADSGQNAWLSYRLIKATEPGLFSVGL 621
>gi|301613239|ref|XP_002936117.1| PREDICTED: cadherin-7-like [Xenopus (Silurana) tropicalis]
Length = 783
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL ++ +L V K G L GT + T+ + D NDN P FP
Sbjct: 209 GIIRTALPHMDREAKDQYLLVIQAKDMVGQMGGLTGTTSVTVTLTDVNDNPPRFPRRSDQ 268
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP--NGLF 153
+PE +P+G+ V + A DAD+GVN+++ + L+ +G+F
Sbjct: 269 YYVPESLPIGSTVAKIKADDADIGVNAEMEYKILDGDVDGMF 310
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
KR R E+ + + P I V+D NDN P F Y+ IPE P
Sbjct: 108 KRLDREEQAYYTLRAQALDRLTSKPKEPESEFVIKVQDINDNEPKFLDGPYTAGIPEMSP 167
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
VGT V V+A+DAD G ++++S++ L+ FS
Sbjct: 168 VGTSVLQVTATDADDPTYGNSARVSYSILQGQPYFS 203
>gi|224046028|ref|XP_002191433.1| PREDICTED: cadherin-19 [Taeniopygia guttata]
Length = 779
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F P T + + + R T+E +L + K PG L T TI + D NDN P
Sbjct: 198 FSVEPKTGVIRMASQMDR--ETKEQYLVIIQAKDMVGQPGALSATATVTINLSDINDNPP 255
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLF 153
F Y +S+ E+ PVGT V V A D D G N+ + + E + +G+F
Sbjct: 256 EFQQRLYYMSVSEEAPVGTTVGKVFAEDRDTGDNTAMDYFIEADSSGVF 304
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y ++PE P GT V V+A+DAD G +++L ++ LE
Sbjct: 137 IKVRDVNDNEPQFLDGPYVATVPEMSPEGTSVTQVTATDADDPSYGNSARLLYSLLEGQP 196
Query: 152 LFS 154
FS
Sbjct: 197 YFS 199
>gi|344265064|ref|XP_003404607.1| PREDICTED: protocadherin beta-13-like [Loxodonta africana]
Length = 798
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + + ED
Sbjct: 196 LDKALDREEEPVLRLTLTAQDGGSP-PRSGTVQVRIEVADTNDNAPEFEQPLYKVQVRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G ++ VSA+D D+G N+++S++
Sbjct: 255 SPIGFLIVRVSATDIDIGANAQISYS 280
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPTT G ++ + + ++ + + G G C + V D NDN P
Sbjct: 292 FQVNPTT------GEIRLKKQLDFETIQSYEVNMEARDAGSFSGKCTVLVQVMDVNDNAP 345
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+S ++ IPE+ P TVV V S SD D N +L +
Sbjct: 346 EISISAFTSPIPENSP-ETVVAVFSVSDLDSEENGRLGCS 384
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N TI++ D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NVTILISDVNDNMPTFSQTSYTLLVRENNSPALHMGSVSATDRDSGSNAQVTYSLLPPQ 494
>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos
saltator]
Length = 3166
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
++ +F N T L R L + L V T G P PL T + I V D N
Sbjct: 854 AVNEFSINSQTGAITTTRALDREL-VSSYLLTV--TARDGGVP-PLSDTTDVEISVTDVN 909
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
DN P+F QY SIPEDV VGT V V+A+DAD +N ++ + E + +G F+ D
Sbjct: 910 DNAPVFEAPQYQGSIPEDVLVGTSVLRVAATDADSDLNGRVKYALEDDGDGAFAID 965
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G T + V D N+ +P+F + YS+S+ ED PVG V VVSA+D+D+G N+
Sbjct: 781 ASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVLVVSATDSDVGKNA 840
Query: 141 KLSWN 145
+++++
Sbjct: 841 QITYS 845
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P GT + V D ND+ P F +Y S+ E VPVG+ V V A+D D G N+++ ++
Sbjct: 345 PRTGTTTLQVNVLDANDHAPSFEWPEYDASVREGVPVGSTVVTVKATDQDTGRNAEVEYS 404
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 92 NTT---IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NTT ++V D NDN P F S + S+ E+VP+G V V A DAD G N+ + +
Sbjct: 572 NTTQLLVMVRDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDADEGKNALIRY 627
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 44 AKFIANPTTRLYKNVGTLKR--ALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
F +PTT + + +L R R + ++ S+ P++ I +ED N
Sbjct: 960 GAFAIDPTTGIVRTAKSLDRESVARYSLKAVAIDRGSPALSSVVPMI------IKIEDIN 1013
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D+ P F + L I E+ PVG+ V + A D D G N+ + ++
Sbjct: 1014 DSPPAFENDKIVLYIAENSPVGSTVGEIFAHDPDEGPNAVVQYS 1057
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+ V D NDN+P F Y + ED P GT V V+A+D D
Sbjct: 692 LTVTDVNDNDPYFEPKNYEAVVSEDDPPGTPVTSVTATDPD 732
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGT--VVQVVSASDADLGVNSKLSW 144
N T++V D NDN P F YS ++ ED+ T +V + A+DAD G N+ + +
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAAVLEDLDYTTNPIVARIRATDADAGSNAAVRY 522
>gi|156399383|ref|XP_001638481.1| predicted protein [Nematostella vectensis]
gi|156225602|gb|EDO46418.1| predicted protein [Nematostella vectensis]
Length = 1888
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 81 GSNPGP--LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
GS+ G L+G C I + D+ND++P+F QY +I ED VG V VSA+DAD G
Sbjct: 1123 GSSRGAERLMGVCQVDIRIGDKNDHDPVFQNKQYEATIKEDFEVGRSVLHVSATDADAGS 1182
Query: 139 NSKLSWNELEPNGLFSSD 156
N+KL+++ N F+ D
Sbjct: 1183 NAKLTYSIQPQNDYFAID 1200
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P P G +IV+D ND +P F ++ I E +G+ V VSA+D D GVN+
Sbjct: 1697 GGDP-PQEGKVKVKVIVDDANDQHPQFTKRVFAAKISESAALGSTVATVSATDRDEGVNA 1755
Query: 141 KLSWN 145
KL ++
Sbjct: 1756 KLKYS 1760
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ I++ D NDN P F Y ++PE PVGT V V+A D D GVN + + +
Sbjct: 821 ADVKIVLRDLNDNPPEFFELSYRDTLPESAPVGTTVLSVTARDLDSGVNGQFHY--FVES 878
Query: 151 GLFSSDLRVEWV-INRSVDQHTN 172
FS D W+ R +D TN
Sbjct: 879 QFFSVDPYTGWITTKRPLDFETN 901
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G G + V D NDNNP F S Y +++ E+ P GT+V + ASD DLG + K +
Sbjct: 1551 GKYSGEATVNVYVLDINDNNPKFEKSHYRVNVSENRPAGTLVVKLRASDPDLGESGKFLY 1610
Query: 145 N 145
+
Sbjct: 1611 D 1611
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
II+ D+NDN PIF Y++S+ E G + VSA D D GVN+++S+ +E NG
Sbjct: 1459 IIITDENDNPPIFEEKVYNISVLESAASGMELLKVSAVDRDFGVNARVSYYISEGNINGA 1518
Query: 153 F 153
F
Sbjct: 1519 F 1519
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ N I +ED NDN P F + +Y + E+ P+G+ V VSA D D G N +++++
Sbjct: 1345 PMSAFANLKIFLEDVNDNPPEFVMPRYQGHVSENAPIGSSVLQVSARDRDSGENGRVTYS 1404
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D N+N+PIF S Y +++PE P+GT + V+A D D G N+ + + N +F+ D
Sbjct: 5 VLDGNNNDPIFQQSSYWVALPEGSPIGTELLRVTAEDLDSGSNADVKYQ--SSNDIFAVD 62
>gi|224064906|ref|XP_002187672.1| PREDICTED: cadherin-8-like [Taeniopygia guttata]
Length = 799
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E + V K G + G L GT TI + D NDN P F S Y S+ EDV +G
Sbjct: 235 EAKEEYFVVIQAKDMGGHMGGLSGTTTVTITLSDVNDNPPKFAQSLYHFSVMEDVALGEP 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGL 152
+ V A+D D+G N+K S++ +E +G+
Sbjct: 295 IGRVKANDLDIGENAKSSYDIIEGDGM 321
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ N T ++ +KR R E+ + PL I V+D NDN P
Sbjct: 109 FVINDKT---GDIHAMKRLDREEKAEYTLTAQAVDRDTNQPLEPPSEFIIKVQDINDNAP 165
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
F Y ++PE VGT V V+A+DAD G ++KL ++ LE FS
Sbjct: 166 EFVEGPYHATVPEMSVVGTFVTKVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|60654415|gb|AAX29898.1| cadherin 18 type 2 [synthetic construct]
Length = 791
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDGEAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|395817393|ref|XP_003782156.1| PREDICTED: protocadherin beta-16 [Otolemur garnettii]
Length = 802
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE +++ T G +P GT I V D NDN P F Y
Sbjct: 194 RKYPELVLDKELDREEEPEVRLTLTALDGGSPS-RSGTAQVLIEVVDTNDNAPEFEKPIY 252
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPE+ PVG++V V A D D GVN K+S+ +P+ S L + E + + V
Sbjct: 253 KVQIPENSPVGSLVVTVIARDLDSGVNGKISYTLFQPSDDISKTLEINPMTGEIRLRKQV 312
Query: 168 DQHT 171
D T
Sbjct: 313 DYET 316
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C+ + V D NDN P +S + IPE+ P +V V S SD D G N
Sbjct: 325 KATDGGGLSGKCSLLLQVTDVNDNPPEVTMSALTSPIPENSP-EIIVAVFSVSDHDSGNN 383
Query: 140 SK 141
K
Sbjct: 384 GK 385
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ P+ + + + T + R E + T P L N T+ V D NDN P
Sbjct: 396 FLLKPSVKNFYTLLTERALDREERAEYNITITVTDLGTPR-LKTQLNITVRVSDINDNAP 454
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
F + Y+L + E+ + +SA+D D G N+++ ++ L P
Sbjct: 455 AFTQTSYTLYVRENNSPALHIGTISATDRDSGTNAQVIYSLLPPQ 499
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
V D NDN+P+F + L IPE+ P+G + +A D D+G N
Sbjct: 128 VRDINDNSPMFIEKEMILKIPENSPLGYAFPLNNAVDLDVGSN 170
>gi|21410266|gb|AAH31051.1| Cadherin 18, type 2 [Homo sapiens]
gi|61363884|gb|AAX42459.1| cadherin 18 type 2 [synthetic construct]
gi|123993751|gb|ABM84477.1| cadherin 18, type 2 [synthetic construct]
gi|123994521|gb|ABM84862.1| cadherin 18, type 2 [synthetic construct]
Length = 790
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDGEAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDN 103
F + TT + TL R R + + L++ T G P PL I ++D NDN
Sbjct: 896 FAVDRTTGVLAVSNTLDRE-RQDLYELRIRATDGGGKGPDNPPLYSEALVRISIDDINDN 954
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFSSD 156
P F + Y++ I ED+P G+VV VV+ASD DLG + ++ + + + +G F D
Sbjct: 955 APKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDGEVVYFLEDSDSDGTFKID 1009
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 91 CNTTI--IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
C++ I I+ D NDN P+F + YS+S+PEDV VGT+V + A+DAD+G+N K+ +
Sbjct: 3104 CSSQIELIISDLNDNPPVFSLPFYSVSLPEDVEVGTLVTKIHATDADIGINRKIKY 3159
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I VED NDN+PIF S+ + I E++P GT V V A D D G N+ +S+
Sbjct: 469 IYVEDTNDNDPIFDESEKFVPIDENLPAGTSVTTVHAKDRDRGENAYISY 518
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++++L ++ G P PL I V D NDN P+F YS I ED +G
Sbjct: 3293 RAKDYFLTIQAVD--GGIP-PLSNVATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDK 3349
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V A+D D N K++++
Sbjct: 3350 ILQVIATDLDSDRNGKVTYS 3369
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+I+++D ND P F Y++SI E GT V V A+D D G+N K+S++
Sbjct: 2277 SIVLQDVNDCPPEFTQENYNVSISEAAQFGTPVLTVIANDNDTGINKKISYS 2328
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
D ND NP+F ++Y+ ++ ED P+ + V A DADLG N ++ ++ E F+
Sbjct: 149 DTNDLNPLFYPTEYNATVFEDTPIHQSILKVVAEDADLGRNGEIYYSFAEETDKFA 204
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F + T K +G L R R E++L + T + P I V D NDN
Sbjct: 791 SQFCVDMDTGELKVIGYLDRE-RESEYFLNI--TLYDLGKPQKSASRM-LPITVLDVNDN 846
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
P+F S S + E+ GT + +A+DAD G N+K++++ + F+ D
Sbjct: 847 APVFERSLASFRVTENALNGTAIFRANATDADAGDNAKVTYSLITDTRDFAVD 899
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV-------QVVSASDA 134
+N TCN I + D+NDN P F + YS +I E P+ +++ V+ A DA
Sbjct: 1800 TNMASASATCNVIIHILDKNDNVPRFLQANYSGTISEAAPISSLILTNTSEPLVIKAFDA 1859
Query: 135 DLGVNSKLSWN--ELEPNGLFSSD 156
D +N+ L ++ ++ P F D
Sbjct: 1860 DSEMNALLHYDIIDILPRRYFQID 1883
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ + V D+ND+ P F S Y + + E+ GT + V A D D G NS++ ++
Sbjct: 2789 PMTALAEVALKVLDENDHAPQFESSPYIIYLAENTEEGTSILKVVAHDEDQGANSEVRYS 2848
Query: 146 ELEPNGLFSSDLRVEWVINRSVDQHT 171
FS DL I ++D HT
Sbjct: 2849 -------FSHDLGDMMNI-FAIDSHT 2866
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 65 LRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
+ T+ H WL V H PL + I V ++NDN P+ + Y +I ED P G
Sbjct: 1130 IETKSHFWLTVFAQDH---GVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTILEDSPAG 1186
Query: 124 TVVQVVSASDADLGVNSKLSW 144
+ V + ASD D N K+++
Sbjct: 1187 SSVLQIRASDKDKDPNQKITY 1207
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T+ V+D NDN P F Y +PE VGT V V A+ D GVN+ ++++
Sbjct: 3213 TVNVQDINDNPPEFANKYYFAVVPEIDAVGTEVVKVLATSKDTGVNADVTYS 3264
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P+F Y + +PE PV T + + +DAD G N+++
Sbjct: 366 DLNDNAPVFNKEIYEVKVPETAPVNTPLIRLKVTDADEGRNAQV 409
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
I + D NDN PIF + Y+ I ED P+G + +DAD N++
Sbjct: 3424 IEISDANDNPPIFAQTNYTTVIQEDKPIGYPIIQFKITDADTAPNTE 3470
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
T+SI + + ++ K G L +R + K+ ++ G G I V
Sbjct: 2534 ITYSIHSELLSEIFKIDKTSGKLTTKVRLDREKQKLYEVLIMATDGGGKSGFITVRIKVA 2593
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
D+NDN P F + +Y SI + + + V A D D G +++ + E
Sbjct: 2594 DENDNAPYFLLKEYQTSIHYNYSLNVLFLRVKAVDPDEGPAAQIRYQIYE 2643
>gi|327269525|ref|XP_003219544.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2539
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S+ F +P + + + R + E+ L V T PL+G C TI + D+N
Sbjct: 489 SLPGFSIDPDSGVITTTRSFDRE-KQREYMLSVIATDQAQE---PLIGMCQITIYIADEN 544
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
DN+P F S+Y + ED PVGT +A D D G N+ ++++ ++
Sbjct: 545 DNDPKFENSRYQYFLREDTPVGTSFLCATAHDDDQGANAAITYSMVQ 591
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D NDN P F S Y +S+PE +GT V V A+DAD G+N ++ ++
Sbjct: 741 PLASFTTVYVNITDVNDNVPFFTSSTYEVSVPEGAGIGTSVMQVLATDADSGLNGEVHYS 800
Query: 146 ELE 148
L+
Sbjct: 801 ILK 803
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 22 ESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENT-KHK 80
E Y L+ SG Y F + T+ + + + R R + ++V++ +
Sbjct: 796 EVHYSILKDSSGDYQ--------YFTIDSTSGVISTLASFDREKRAS-YLIEVQSQDSSE 846
Query: 81 GSNPG----PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ PG P T I + D NDN P FP Y + ED VG V +A+D D
Sbjct: 847 SARPGIYGQPNTDTAYVRIFISDVNDNCPAFPHLVYETDVDEDQDVGYAVLTATATDKDE 906
Query: 137 GVNSKLSW 144
G N+KL +
Sbjct: 907 GSNAKLRY 914
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLS-IPEDVPVGTVVQVVSASDADLGVNSKLSW---NEL 147
+ I VED ND+ P+F Y ++ + EDV +GT V V D D G+N + S+ N+
Sbjct: 1293 HCVIYVEDYNDHAPLFYPQFYEVAGLAEDVSLGTKVVQVIGIDLDSGLNGRFSYRLLNKS 1352
Query: 148 EPNGLFS 154
+P+G FS
Sbjct: 1353 DPSGRFS 1359
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 46 FIANPTT-RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F NP T +Y + TL R R + +L V K + G L GT TI+V D ND+
Sbjct: 1144 FSVNPVTGTIYTVLSTLDREKR--DKYLVVVEAK----DGGGLTGTGTATILVTDINDHA 1197
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P F Y+ + E V T+V VSA+D D G N+ ++++ L+
Sbjct: 1198 PAFTQKIYTAFVSEGASVNTLVAEVSATDEDEGENAVVTFSILD 1241
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 97 VEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW------NELEP 149
+ D+ND P F S YS +I E +P+GT + V A+D D G NS++ + + P
Sbjct: 222 ITDENDCFPEFQQSIYSRENILESIPIGTSLLQVLATDCDSGSNSEIIYFLQTADFSITP 281
Query: 150 NGLFSSDLRVEW 161
G+ SS+ ++++
Sbjct: 282 EGVISSNQQLDF 293
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS---IPEDVPVGTVVQVVSASDADLGVNS 140
P L + + D N+N PIF Y + E+ P GT V V A DADLG N
Sbjct: 418 PRSLCSFAEVVVGINDINNNKPIFRECAYYSDNTWVLENQPPGTYVLRVEAYDADLGQNG 477
Query: 141 KLSWNELEPNG 151
++ ++ + +G
Sbjct: 478 EVKYSLMHRDG 488
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDN 103
F + TT + TL R R + + L++ T G P PL I ++D NDN
Sbjct: 896 FAVDRTTGVLAVSNTLDRE-RQDLYELRIRATDGGGKGPDNPPLYSEALVRISIDDINDN 954
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFSSD 156
P F + Y++ I ED+P G+VV VV+ASD DLG + ++ + + + +G F D
Sbjct: 955 APKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDGEVVYFLEDSDSDGTFKID 1009
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 91 CNTTI--IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
C++ I I+ D NDN P+F + YS+S+PEDV VGT+V + A+DAD+G+N K+ +
Sbjct: 3143 CSSQIELIISDLNDNPPVFSLPFYSVSLPEDVEVGTLVTKIHATDADIGINRKIKY 3198
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I VED NDN+PIF S+ + I E++P GT V V A D D G N+ +S+
Sbjct: 469 IYVEDTNDNDPIFDESEKFVPIDENLPAGTSVTTVHAKDRDRGENAYISY 518
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++++L ++ G P PL I V D NDN P+F YS I ED +G
Sbjct: 3332 RAKDYFLTIQAVD--GGIP-PLSNVATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDK 3388
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V A+D D N K++++
Sbjct: 3389 ILQVIATDLDSDRNGKVTYS 3408
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+I+++D ND P F Y++SI E GT V V A+D D G+N K+S++
Sbjct: 2316 SIVLQDVNDCPPEFTQENYNVSISEAAQFGTPVLTVIANDNDTGINKKISYS 2367
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
D ND NP+F ++Y+ ++ ED P+ + V A DADLG N ++ ++ E F+
Sbjct: 149 DTNDLNPLFYPTEYNATVFEDTPIHQSILKVVAEDADLGRNGEIYYSFAEETDKFA 204
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F + T K +G L R R E++L + T + P I V D NDN
Sbjct: 791 SQFCVDMDTGELKVIGYLDRE-RESEYFLNI--TLYDLGKPQKSASRM-LPITVLDVNDN 846
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
P+F S S + E+ GT + +A+DAD G N+K++++ + F+ D
Sbjct: 847 APVFERSLASFRVTENALNGTAIFRANATDADAGDNAKVTYSLITDTRDFAVD 899
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
F N +T L + T R L E EH L+V+ + + PL T + ++D ND
Sbjct: 1218 FSINSSTGL---ITTTSRKLDRETLDEHILEVQISDNGSP---PLSSTTYVVVKIDDIND 1271
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N P F YS+ IP V V A D D G NS+L ++
Sbjct: 1272 NAPEFEQISYSVQIPASADFNQAVFQVLAFDRDSGPNSELHYS 1314
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV-------QVVSASDA 134
+N TCN I + D+NDN P F + YS +I E P+ +++ V+ A DA
Sbjct: 1782 TNMASASATCNVIIHILDKNDNVPRFLQANYSGTISEAAPISSLILTNTSEPLVIKAFDA 1841
Query: 135 DLGVNSKLSWN--ELEPNGLFSSD 156
D +N+ L ++ ++ P F D
Sbjct: 1842 DSEMNALLHYDIIDILPRRYFQID 1865
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P+ + V D+ND+ P F S Y + + E+ GT + V A D D G NS++ ++
Sbjct: 2828 PMTALAEVALKVLDENDHAPQFESSPYIIYLAENTEEGTSILKVVAHDEDQGANSEVRYS 2887
Query: 146 ELEPNGLFSSDLRVEWVINRSVDQHT 171
FS DL I ++D HT
Sbjct: 2888 -------FSHDLGDMMNI-FAIDSHT 2905
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 65 LRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
+ T+ H WL V H PL + I V ++NDN P+ + Y +I ED P G
Sbjct: 1130 IETKSHFWLTVFAQDH---GVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTILEDSPAG 1186
Query: 124 TVVQVVSASDADLGVNSKLSW 144
+ V + ASD D N K+++
Sbjct: 1187 SSVLQIRASDKDKDPNQKITY 1207
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T+ V+D NDN P F Y +PE VGT V V A+ D GVN+ ++++
Sbjct: 3252 TVNVQDINDNPPEFANKYYFAVVPEIDAVGTEVVKVLATSKDTGVNADVTYS 3303
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P+F Y + +PE PV T + + +DAD G N+++
Sbjct: 366 DLNDNAPVFNKEIYEVKVPETAPVNTPLIRLKVTDADEGRNAQV 409
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
I + D NDN PIF + Y+ I ED P+G + +DAD N++
Sbjct: 3463 IEISDANDNPPIFAQTNYTTVIQEDKPIGYPIIQFKITDADTAPNTE 3509
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
T+SI + + ++ K G L +R + K+ ++ G G I V
Sbjct: 2573 ITYSIHSELLSEIFKIDKTSGKLTTKVRLDREKQKLYEVLIMATDGGGKSGFITVRIKVA 2632
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
D+NDN P F + +Y SI + + + V A D D G +++ + E
Sbjct: 2633 DENDNAPYFLLKEYQTSIHYNYSLNVLFLRVKAVDPDEGPAAQIRYQIYE 2682
>gi|124487065|ref|NP_001074855.1| cadherin-19 precursor [Mus musculus]
Length = 770
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L ++ + + K PG L GT +I + D NDN P
Sbjct: 195 FSVEPTTGVIRISSKMDREL--QDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKP 252
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +I E P+GT + + A D D+G N+++ ++
Sbjct: 253 IFKESFYRFTISESAPIGTSIGKIMAYDDDIGENAEMEYS 292
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 73 KVENTKHKGSNPGPLVGTCNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
KV+N H P +TT I VED+ D P+F + Y L IPE P GT+V V
Sbjct: 333 KVKNC-HVDEELAPAHVNASTTYIKVQVEDE-DEPPVFLLPYYILEIPEGKPYGTIVGTV 390
Query: 130 SASDAD 135
SA+D D
Sbjct: 391 SATDPD 396
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVP 121
+ L EE L + + + G V T + +I V D NDN P F Y +PE P
Sbjct: 101 QKLDREEKSLYILRAQVIDTTIGKAVETESEFVIRVLDINDNEPRFLDEPYEAIVPEMSP 160
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWN 145
GT V V+A+DAD G ++++ +N
Sbjct: 161 EGTFVIKVTANDADDPSTGYHARILYN 187
>gi|432104659|gb|ELK31271.1| Cadherin-6 [Myotis davidii]
Length = 790
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL +E + V K G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALFNMDRENKEQYQVVIQAKDMAGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y + PE P GT + + A+DAD+G N+ + ++ E GL
Sbjct: 264 NPPRFPQSTYQFTTPESSPPGTSIGRIKATDADVGENAAIQYSITEGEGL 313
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGTVV V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTVVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y+L I ED + T + V+A D D N
Sbjct: 387 AYTLQIREDAQINTAIGSVTAQDPDAARN 415
>gi|126320893|ref|XP_001364985.1| PREDICTED: cadherin-20 [Monodelphis domestica]
Length = 801
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +GL + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGLDTFDINTD 327
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+++ L E + LKVE GSNP GP T I VED D PIF
Sbjct: 336 TVRKPLSFESKKSYTLKVE-----GSNPHLEVRFLNLGPFQDTTTVHISVEDV-DEPPIF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 DPGFYFVEVPEDVEIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP +G+ + T+ V D NDN P FP Y + E+ G +
Sbjct: 454 REEISWHNITVLAMEMNNPSQ-IGSVSVTVKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D + + + L P
Sbjct: 512 IQTVSAIDQDDPQDGQHFYYSLAPEA 537
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ + L+V+ T G G L N TI+V D NDN P+F Y +++PEDV VGT V
Sbjct: 3216 DSYRLRVQATDQAGQR-GALSSQVNLTILVLDVNDNAPVFQRRDYGVTVPEDVAVGTEVL 3274
Query: 128 VVSASDADLGVNSKLSW-----NELEPNGLFSSDLRV 159
V A+ D+G+N+++++ NEL G F+ D ++
Sbjct: 3275 RVLATSVDIGLNAEITYRIRSGNEL---GKFTIDTQL 3308
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I +ED NDN+P F Y +SI E +P+GTVV V SA+D+D G NG +
Sbjct: 455 ITIEDANDNSPAFNKPFYDISINESLPLGTVVLVASATDSDKG-----------ENGFVT 503
Query: 155 SDLRVEWVINRSVDQHTNK 173
+ E + S+DQ+T +
Sbjct: 504 HTIAGEMSLPFSIDQNTGE 522
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
C+ +I+ D+NDN P F +Y +SI +V G++V + ASD D G N +++++
Sbjct: 2587 CSVRVILADENDNAPRFRAVEYRMSIKANVAKGSLVTQIQASDPDAGSNGRITYS 2641
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
++++L +E G NP PL TI + D NDN P F Y++ + ED VG +V
Sbjct: 3323 KDYYLTLE--AWDGGNP-PLSSATVVTIELMDVNDNAPTFSQDIYNVLVSEDASVGQMVT 3379
Query: 128 VVSASDADLGVNSKLSWNELE 148
VSA D D VN +++++ L+
Sbjct: 3380 RVSAEDLDSQVNGRITYSILK 3400
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+ + L ++ + +G L I V D ND P+F + YS +PE P+G V
Sbjct: 123 DSYTLTIKASAQRG-----LEALATVYIRVLDTNDLRPLFSPTSYSFVVPESAPLGASVG 177
Query: 128 VVSASDADLGVNSKLSW 144
V+A+DAD+G N + +
Sbjct: 178 RVTATDADMGSNGEFYY 194
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ + D NDN+PI + YS S PED+P+ + V+A+DAD G ++++ ++
Sbjct: 3034 VTIMDANDNSPICNQAVYSASFPEDMPINKGILTVAATDADSGSSAEIQYS 3084
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+I+ED NDN+P F +S + E+ +G V +SA D D+G N +LS+
Sbjct: 812 TVIIEDTNDNDPQFYQDSFSALVLENAAIGLEVISISAFDRDMGQNGQLSY 862
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+II++D ND P F + Y +PED+P G V+ V A D D+G + ++ +
Sbjct: 917 SIIIDDVNDCAPAFIPNSYGARVPEDLPPGAVITWVQAQDPDIGPSGQVRY 967
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTT---IIVED 99
F NP T L + T R L E EH+L+V GP+ +T + VED
Sbjct: 1190 FSINPRTGL---ITTTTRKLDREQQAEHFLEVTVID------GPVTTRQSTVWVIVHVED 1240
Query: 100 QNDNNPIFPVSQYSLSIPEDV--PVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+NDN P FP Y +S+ E G V V A D DLG N ++++ +E NG
Sbjct: 1241 ENDNPPTFPEVTYRISLTERDRNKRGEPVYRVFAYDRDLGANGNITYSIIEGNG 1294
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L VGTL A + V N + ++ G T I V+D NDN P+F Y
Sbjct: 1401 LQVGVGTLIVAKPLDAEVQSVYNMTVQVTD-GTNFATTQVFIRVQDSNDNPPVFSQPAYD 1459
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+S+ EDVPV + V ASD D
Sbjct: 1460 VSVSEDVPVDVELARVRASDLD 1481
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
+ VED NDN P F + Y + E P GT V V+A D D G+N +L++ N G+
Sbjct: 1547 VAVEDSNDNIPYFTSTVYDATAYESSPSGTSVLQVTALDKDNGINGQLTYTIEAGNTGGV 1606
Query: 153 FSSDLRVEWV-INRSVD 168
F D + I R++D
Sbjct: 1607 FGIDAATGLIFIARALD 1623
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V T + + + D NDN P+F + Y ++ E +PVGT V V A D D G N +++++
Sbjct: 2798 VTTVDLEVKILDVNDNKPMFETNTYVSTVMEGMPVGTRVVQVRALDPDWGSNGQVTYS 2855
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
N G L+ A + + ++ G L C+ ++ V D NDN P F Y S+
Sbjct: 3098 NTGELRSATVMDRETTPSYKLIAQATDGGGLFCRCDISLKVLDVNDNAPAFSSPHYLASV 3157
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEP-NGLFSSDLRVEWVI-NRSVDQHTN 172
E+ ++ + ASD D G+N L + ++ + FS D VI +S+D+ +
Sbjct: 3158 YENAAPKALLTRLQASDPDEGINRTLVYTLVDSVDEFFSIDPVSGMVILEKSLDRESQ 3215
>gi|187957174|gb|AAI57928.1| Cadherin 19, type 2 [Mus musculus]
Length = 770
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L ++ + + K PG L GT +I + D NDN P
Sbjct: 195 FSVEPTTGVIRISSKMDREL--QDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKP 252
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +I E P+GT + + A D D+G N+++ ++
Sbjct: 253 IFKESFYRFTISESAPIGTSIGKIMAYDDDIGENAEMEYS 292
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 73 KVENTKHKGSNPGPLVGTCNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
KV+N H P +TT I VED+ D P+F + Y L IPE P GT+V V
Sbjct: 333 KVKNC-HVDEELAPAHVNASTTYIKVQVEDE-DEPPVFLLPYYILEIPEGKPYGTIVGTV 390
Query: 130 SASDAD 135
SA+D D
Sbjct: 391 SATDPD 396
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVP 121
+ L EE L + + + G V T + +I V D NDN P F Y +PE P
Sbjct: 101 QKLDREEKSLYILRAQVIDTTIGKAVETESEFVIRVLDINDNEPRFLDEPYEAIVPEMSP 160
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWN 145
GT V V+A+DAD G ++++ +N
Sbjct: 161 EGTFVIKVTANDADDPSTGYHARILYN 187
>gi|432930271|ref|XP_004081405.1| PREDICTED: cadherin-20-like [Oryzias latipes]
Length = 730
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T E++ V K G G L GT I + D NDN P+F Y +S+ E P+G+V
Sbjct: 159 ETRENYTVVIQAKDMGGQLGGLAGTTTINITLSDVNDNAPVFDQRLYQMSVLESAPMGSV 218
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V + A D D+GVN+++ + ++ +G + D+ +
Sbjct: 219 VGRIWAKDRDVGVNAEMKYRIIDGDGRDTFDISTD 253
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 40 TFSIAKFIANPTTRLYKNVGTLKRALRTEE---HWLKVENTKHKGS----NPGPLVGTCN 92
TF I+ +PT R + +K+ L E+ + LKVE NPGP
Sbjct: 247 TFDIS---TDPTNRF--GIIMVKKLLDFEKKPSYTLKVEGVNTHPDLTFQNPGPFKDVTI 301
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ VED D P+F + Y + +PED +GTVV+ V+A D D N+
Sbjct: 302 VHVSVEDV-DEPPLFDSAAYYMELPEDAEIGTVVRTVTARDPDAANNT 348
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + ++D NDN P F Y ++PE VGT V ++A+DAD G ++++
Sbjct: 70 PLEPESEFIVKIQDINDNEPKFLDGPYQATVPEMSKVGTPVIQLTATDADDPTYGNSARV 129
Query: 143 SWNELEPNGLFSSDLRVEWV 162
++ LE FS D + V
Sbjct: 130 VYSILEGQPYFSVDAKTGMV 149
>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur garnettii]
Length = 3374
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2427 AHDGPHEGCANLTVLVEDVNDNAPAFSQSLYQVTLLEHTPPGSAIISVSATDRDSGANGH 2486
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2487 ISYHLASPAAGFSVD 2501
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1884 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPTYSVEVPE 1942
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 1943 DVPAGTLLLQLQAHDPDAGANGRVTY 1968
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ + D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2657 PRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2716
Query: 144 WNELEPNGLFSSD 156
+ +P+GLF D
Sbjct: 2717 LSSGDPSGLFELD 2729
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T TI V D ND P F
Sbjct: 1669 RLHSSTGALSVVRPLDREQQAEHILTVVASDH-GSPPRS--ATQVLTISVADVNDEAPAF 1725
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1726 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1762
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP S+ ++ +P + GT + + A D D GVNS
Sbjct: 944 GSGVPPAFAVARVRVLLDDVNDNSPAFPASEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 1003
Query: 141 KLSW 144
++++
Sbjct: 1004 RVTF 1007
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P P + + VED+ND+ P F + SL +PE
Sbjct: 1781 TLRALDREEQEEINLTVYARDRGSP-PQLTHVTVRVAVEDENDHTPTFGSAHLSLEVPEG 1839
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ V+ ASD D+G N +L + L +P+G F DL
Sbjct: 1840 QDPQTLT-VLRASDPDMGANGQLQYRILDGDPSGAFVLDL 1878
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2769 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2823
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ ++D NDN P F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 633 PLSSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 692
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P+ + + + A D D
Sbjct: 2010 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPILSTPTLPLATLRAEDRDA 2069
Query: 137 GVNSKL 142
G N+ +
Sbjct: 2070 GANASI 2075
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2333 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2388
Query: 147 LEPNG 151
L P+G
Sbjct: 2389 LSPSG 2393
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN+P+F S + +PED P G V V A D DLG +++S+
Sbjct: 1612 VTDENDNSPVF-ASPSRVRLPEDQPPGPVALHVVARDLDLGEAARVSY 1658
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP S+ +L +PE +GT + A DAD G
Sbjct: 198 PDGATVEVTVRVADINDHAPAFPQSRAALQVPEHTALGTRYPLEPARDADAG 249
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2548 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2586
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 739 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSY 798
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D + V W + R +
Sbjct: 799 HILAGNSPPLFTLDEHSGLVTVAWPLVRRAN 829
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1142 ELYTLKVMAVSGSKAEVGQQTGTATVRVSILNQNDHSPRLSEDPTFLAVAENQPPGTSVG 1201
Query: 128 VVSASDADLGVNSKLSWN 145
+ A+D D G N +L+++
Sbjct: 1202 RIFATDRDSGPNGRLTYS 1219
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 287 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDITLL--DINDHAPAFNQSRYHAVVSE 342
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 343 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 384
>gi|395504776|ref|XP_003756723.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 810
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P L GT ++V D NDN P+F S Y +S+PE+VPVGTV+ V+A+D D G+N
Sbjct: 218 GGDPA-LSGTARIRVVVLDLNDNAPVFTQSVYHVSVPENVPVGTVLLRVNATDRDEGING 276
Query: 141 KLSWN 145
+++++
Sbjct: 277 EVTYS 281
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTI 95
+ I AN +L K++ +R + + + N S+ G PL + +
Sbjct: 382 YVICSIPANLPFKLQKSINNYQRLVTEGVLDREQISEYNITVTASDHGTPPLFTVTHLFL 441
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V D NDN P F + YS IPE+ P G+ + ++A D D NS+++++
Sbjct: 442 RVTDINDNPPSFSQTSYSAYIPENNPRGSSIYSMTACDPDSEENSRITYS 491
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 82 SNPGP-LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+N GP L G T+ V D NDN P ++ ++ S+ E+ P GT+V + + D D G N
Sbjct: 322 ANDGPGLSGRAKVTVKVVDVNDNAPEVTMTSFTSSVTENSPPGTIVALFNVHDQDSGEN 380
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++D NDN P F + + I E+ G + SA D D+GVNS S+ +L PN FS
Sbjct: 124 IKDINDNTPHFQAEELDVKINENAARGAQFGLPSAWDPDVGVNSLQSY-QLSPNNYFS 180
>gi|150247129|ref|NP_001092838.1| protocadherin gamma-A2 precursor [Bos taurus]
gi|146186663|gb|AAI40647.1| PCDHGA2 protein [Bos taurus]
gi|296485226|tpg|DAA27341.1| TPA: protocadherin gamma subfamily A, 2 [Bos taurus]
Length = 826
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L RAL EE H+L ++ G +P GT + V D NDN P+F +Y +S+P
Sbjct: 196 LARALDREEEAVHYLVLKALD--GGDP-IRSGTSRIRVTVLDVNDNAPVFIQPEYGVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
ED PVGT + V+A+DAD G N+++++
Sbjct: 253 EDTPVGTRILTVTATDADEGYNAQVTY 279
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P F V + L I E G + + SA DAD+G N+ L E+ N FS D
Sbjct: 123 IKDINDNAPRFGVEEVELKISETTMPGFRIPLKSAHDADVGENT-LQKYEINSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSGMDGNKYPELVLARALDRE 203
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ + V D NDN P F ++ + S+
Sbjct: 302 TIIKSLDYEDAKFHEIDIEAQDGPG-----LLTRMKVIVTVLDVNDNVPEFYMTSATSSV 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PED P GT++ + + D D G N+ ++ +
Sbjct: 357 PEDSPPGTIIALFNVHDRDSGQNAFITCS 385
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P FP + YS IPE+ P G + V A D D N+ ++++ E
Sbjct: 442 VTDINDNPPTFPHTSYSAYIPENNPRGASIFSVMACDPDSNDNAHVTYSLAE 493
>gi|14270505|ref|NP_115270.1| protocadherin gamma-B5 isoform 2 precursor [Homo sapiens]
gi|5457090|gb|AAD43781.1|AF152521_1 protocadherin gamma B5 short form protein [Homo sapiens]
gi|62739582|gb|AAH93879.1| Protocadherin gamma subfamily B, 5 [Homo sapiens]
gi|62740021|gb|AAH93877.1| Protocadherin gamma subfamily B, 5 [Homo sapiens]
gi|119582352|gb|EAW61948.1| hCG1982215, isoform CRA_aa [Homo sapiens]
Length = 818
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGHP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|403255742|ref|XP_003920570.1| PREDICTED: protocadherin gamma-A7 [Saimiri boliviensis boliviensis]
Length = 816
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P PL
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHLVLTASDGGDP-PLSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + V D ND+ P+F + QY +++PE+VPVGT + + A D D GVN +++++
Sbjct: 225 TARIQVTVVDVNDHAPVFSLPQYQVTVPENVPVGTRLLTIHAIDLDEGVNGEVTYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 68 EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+ L + N K ++ G PL + ++ V D NDN P FP S YS+ IPE+ P G
Sbjct: 411 DRETLSMYNVTLKATDGGTPPLSRETHISVQVTDTNDNPPTFPHSSYSVYIPENNPRGAS 470
Query: 126 VQVVSASDADLGVNSKLSWNELE 148
+ +V+A D D N++++++ E
Sbjct: 471 IFLVTAQDHDSEENAQVTYSLAE 493
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P V+ S
Sbjct: 297 LTGELSTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDMNDNAPEVTVTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|348582940|ref|XP_003477234.1| PREDICTED: protocadherin gamma-A12-like [Cavia porcellus]
Length = 812
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL EE H L + T G +P GT ++V D NDN P F S+Y +S+P
Sbjct: 196 LERALDREEKAAHQLVL--TALDGGDP-VRTGTARIRVVVVDANDNAPAFARSEYRVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
EDV VGT + +V+A+D D G N+++ ++
Sbjct: 253 EDVAVGTQLLLVNATDPDEGANAEVMYS 280
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL +++V D NDN P+FP + YS IPE+ P G + V+A D+D N+++
Sbjct: 429 NP-PLSMETRISLVVVDTNDNAPVFPQASYSAYIPENNPRGAPIFSVTAHDSDCDENAQV 487
Query: 143 SWNELE 148
+++ +E
Sbjct: 488 TYSLVE 493
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
I V D NDN P V+ + SIPE+ P GT++ ++ +D D G N ++
Sbjct: 335 ITVLDVNDNAPEVVVTSLTSSIPENSPKGTLIALLHVNDQDSGENGQV 382
>gi|390459367|ref|XP_003732289.1| PREDICTED: protocadherin gamma-A7-like [Callithrix jacchus]
Length = 816
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P PL
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHMVLTASDGGDP-PLSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + V D ND+ P+F + QY +++PE+VPVGT + + A D D GVN +++++
Sbjct: 225 TARIQVTVVDVNDHAPVFSLPQYQVTVPENVPVGTRLLTIHAIDLDEGVNGEVTYS 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 68 EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+ L + N K ++ G PL + ++ V D NDN P FP S YS+ IPE+ P G
Sbjct: 411 DRETLSMYNVTLKATDGGTPPLSRETHISVQVADTNDNPPTFPYSSYSVYIPENNPRGAS 470
Query: 126 VQVVSASDADLGVNSKLSWNELE 148
+ +V+A D D N++++++ E
Sbjct: 471 IFLVTAQDHDSEENAQVTYSLAE 493
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P V+ S
Sbjct: 297 LTGELSTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDMNDNAPEVTVTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|326673381|ref|XP_003199867.1| PREDICTED: protocadherin beta-15-like [Danio rerio]
Length = 810
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
I P R Y + K R ++ + + T G P P GT + V D NDN P+
Sbjct: 184 ITRPNGRKYGELVLNKELDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPV 242
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 243 FSQAVYKVSLPENSPVDTVVVTVSATDADEGQNGEVTY 280
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 409 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 465 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 497
>gi|390459359|ref|XP_003732286.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-10-like
[Callithrix jacchus]
Length = 761
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P P GT I+V D NDN P F + Y +PE+
Sbjct: 196 LDKALDREEQGELSLTLTALDGGSP-PRSGTSTVHIVVLDVNDNAPQFTQALYETQVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA D D GVN +++++ + S ++R + IN
Sbjct: 255 SPVGSLIVKVSAEDVDSGVNGEVAYSFFD----VSENIRTTFQIN 295
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V D ND++P+F + +L IPE+ GT ++ A D D G+NS ++ + PN F
Sbjct: 123 VRDTNDHSPVFQEKETALKIPENTAEGTAFRLERAQDPDGGLNSIQNYT-ISPNSFFHIK 181
Query: 154 --SSDLRV---EWVINRSVDQH 170
SD V E V+++++D+
Sbjct: 182 ISGSDEGVIYPELVLDKALDRE 203
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N TI+V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 399 NITILVSDVNDNAPAFTQTSYTLFVRENNSPALHIGTVSATDRDSGTNAQVTYSLL 454
>gi|301753503|ref|XP_002912638.1| PREDICTED: protocadherin gamma-A7-like [Ailuropoda melanoleuca]
Length = 824
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T G +P PL T + V D ND+ P+F + QY +++PE+
Sbjct: 195 LERVLDREEEAVHHLLLTASDGGDP-PLSQTARIQVTVVDVNDHAPVFSLPQYQITVPEN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V A D D GVN +++++
Sbjct: 254 VPVGTRLLTVHAVDLDEGVNGEVTYS 279
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 40 TFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIV 97
T +I++ + R N L A + V N K ++ G PL + ++ V
Sbjct: 382 TCTISENLPFKLERSIDNYYRLMTAKNLDREKCSVYNITLKATDGGTPPLYSETHISVNV 441
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P FP S YS+ IPE+ P G + V+A D D N++++++
Sbjct: 442 ADTNDNPPAFPQSSYSVYIPENNPRGASIFSVTAHDPDSYENARITYS 489
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I + D NDN P V+ S SIPED P G +V + D D G N +++
Sbjct: 334 ITILDVNDNAPEVTVTSVSNSIPEDTPPGAIVALFYLQDRDSGKNGEVTC 383
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSI-----PEDVPVGT 124
L++ T H +P PL + +I + DQNDN P ++P S P G
Sbjct: 527 LQLRVTAHDSGDP-PLSSNVSLSIFIVDQNDNTPEILYPALPTDGSTGVELAPRSAEPGY 585
Query: 125 VVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
+V V A D D G N+ LS+ L+ + GLF+ L
Sbjct: 586 LVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGL 620
>gi|149017334|gb|EDL76385.1| rCG49295, isoform CRA_u [Rattus norvegicus]
Length = 924
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++ + ++ T G +P PL T I V D NDN P+F Y
Sbjct: 189 RKYPELVLEKTLDREQQSYYRLVLTALDGGDP-PLSSTTELRIQVTDANDNPPVFDQEVY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+VP GT V V+A+D D GVNS+++++
Sbjct: 248 RVRLPENVPPGTTVARVTATDKDEGVNSEITYS 280
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R L T E+ + + T G P PL + T+ V D NDN P+F + Y + I E+
Sbjct: 405 TLDREL-TPEYNVSIMATD--GGKP-PLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAEN 460
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P G + VSASD DLG N +S+ ++LEP L+S
Sbjct: 461 NPPGASIAQVSASDPDLGSNGHVSYSIIASDLEPKSLWS 499
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK + + G LV C I ++D+NDN P V +IPE+ P
Sbjct: 298 TTQRTLDFEETKEYSIVVEARDGGGLVAQCTVEINIQDENDNKPEITVHSLLETIPENAP 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLF----SSDLRVEWVINRSVDQH 170
GT++ ++ D D G N +++ L+ F SS + V +R++D+
Sbjct: 358 PGTLISLIKIHDRDSGENGEVNC-RLDSEAPFKIISSSKNSYKLVTDRTLDRE 409
>gi|355691686|gb|EHH26871.1| hypothetical protein EGK_16947 [Macaca mulatta]
Length = 697
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 131 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVHIEVVDINDNAPEFEQPIY 189
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ +G++V VSA D D G N K+S++ +P+ S L V
Sbjct: 190 KVRIPENSSLGSLVATVSARDLDSGANGKISYSLFQPSEDISKTLEV 236
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 262 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 320
Query: 140 SK 141
K
Sbjct: 321 GK 322
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
V D ND++PIF + L IPE+ P+GT + A D+D+G N+ ++ ++ PN F
Sbjct: 65 VIDINDHSPIFTEKEIILKIPENSPLGTEFPLYHALDSDVGSNNVQNY-KISPNSHF 120
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T+ + D NDN P F + Y+L + E+ + VSA+D+D G N++ + N
Sbjct: 378 NITVQISDVNDNAPAFTQTFYTLFVRENNSPALHIGSVSATDSDSGTNAQTTAN 431
>gi|109079041|ref|XP_001091535.1| PREDICTED: protocadherin beta-16 [Macaca mulatta]
Length = 776
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVHIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ +G++V VSA D D G N K+S++ +P+ S L V
Sbjct: 248 KVRIPENSSLGSLVATVSARDLDSGANGKISYSLFQPSEDISKTLEV 294
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
V D ND++PIF + L IPE+ P+GT + A D+D+G N+ ++ ++ PN F
Sbjct: 123 VIDINDHSPIFTEKEIILKIPENSPLGTEFPLYHALDSDVGSNNVQNY-KISPNSHF 178
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPAFTQTFYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
>gi|348582920|ref|XP_003477224.1| PREDICTED: protocadherin gamma-A5-like [Cavia porcellus]
Length = 814
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R +E + T G +P L T + V D NDN P+F S+Y +S+PE+
Sbjct: 196 LERPLDREKEATHDLLLTALDGGDP-VLSSTTRIRVTVLDANDNAPLFTQSEYRVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + ++ASDAD G+N K+++
Sbjct: 255 IPVGTRLLTLTASDADEGINGKVTY 279
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + V D NDN P FP + Y SIPE+ P G ++A D D G N+ ++++
Sbjct: 431 PLATEKQIFLKVADINDNAPAFPRASYDTSIPENNPRGVSFFSLTAYDPDSGDNALVTYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
D NDN P F + + I E+ GT + + A DAD+GVNS S+ +L N FS D++
Sbjct: 125 DINDNPPRFRDEELKVKISENAAAGTRLVLPFARDADVGVNSLHSY-QLSSNLHFSLDVK 183
Query: 159 V--------EWVINRSVDQH 170
E V+ R +D+
Sbjct: 184 SGSDGQKYPELVLERPLDRE 203
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1807 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1865
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN---------ELEPNGLFSSDLRVEWVINR 165
D P GT++ + A D D G N ++++ LEP+ S +LR V++R
Sbjct: 1866 DAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPS---SGELRTATVLDR 1918
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2350 AHDGPHEGHANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGH 2409
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2410 ISYHLASPAEGFSVD 2424
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED P+G + V ASDAD G + + +
Sbjct: 2580 PRSSAVPVTVTVLDVNDNPPVFTQASYRMAVPEDTPIGVELLHVEASDADPGPHGLVRFT 2639
Query: 144 WNELEPNGLFSSD 156
+ +P+GLF D
Sbjct: 2640 LSSGDPSGLFELD 2652
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P+FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2692 TIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2746
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R+L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1592 RLHSSTGALSVVRSLDREQRAEHVLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAPAF 1648
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1649 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1685
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P PL+ + VED+ND+ P F SL +PE
Sbjct: 1704 TLRALDREEQEEINLTVYARDRGSP-PLLTHVTVRVAVEDENDHAPTFGSVHLSLEVPEG 1762
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ V+ ASD D+G N +L + L +P+G F DL
Sbjct: 1763 QDPQTLT-VLRASDPDVGANGQLQYRILDGDPSGAFILDL 1801
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 520 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 575
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 576 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 615
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT + + A D D GVN
Sbjct: 867 GSGVPPAFSMARVRVLLDDVNDNSPAFPAPEDTVLLPPSTAPGTPIYTLRALDPDAGVNG 926
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 927 RVTFTLLAGGG 937
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2256 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDTLLGSEIAQVTGNDVDSG---PVLWYV 2311
Query: 147 LEPNG 151
L P+G
Sbjct: 2312 LSPSG 2316
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2471 LQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2509
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1933 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLPLATLRAEDRDA 1992
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1993 GANASI 1998
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 121 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 172
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 662 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSY 721
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
L N LF+ D L V W + R +
Sbjct: 722 YILAGNNPPLFALDEHSGLLTVAWPLARRAN 752
Score = 40.0 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ G NP P T I V D NDN+P
Sbjct: 1153 FRIHPQTGEMTTLQTLDRE-RQSSYQLLVQ--VQDGGNP-PRSTTGTVHIAVLDLNDNSP 1208
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1209 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1264
Score = 40.0 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1065 ELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1124
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1125 RVFATDRDSGPNGRLTYS 1142
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + IPED P G V A D DLG +++S+
Sbjct: 1535 VTDENDNAPVF-ASPSRVRIPEDQPPGPAALHVVARDPDLGEAARVSY 1581
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 210 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 265
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 266 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 307
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + + S L+ + +P GLFS D
Sbjct: 787 PVFEQLQYVFSVPEDVAPGTSVGVVQARNPPGRLGSVTLALSGGDPRGLFSLD 839
>gi|397517996|ref|XP_003829186.1| PREDICTED: protocadherin beta-15 [Pan paniscus]
Length = 787
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFAQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREITLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|324499655|gb|ADY39858.1| Protocadherin-like wing polarity protein stan [Ascaris suum]
Length = 2637
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 23 SRYLHLRPKSGMYAP----AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTK 78
S +HL+ + G +T F + T L L R +RT V T
Sbjct: 709 SEVIHLQAEDGDRGTNAMITYTIDSPDFAIDEKTGLITVASDLDREVRTT---YVVNVTV 765
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
++P PL + II+ED NDN P+F S Y+++I ED PVGT ++A+D D G
Sbjct: 766 QDHASP-PLTASTTIEIILEDVNDNAPVFSSSNYTMTISEDTPVGTSFMQITATDLDAGS 824
Query: 139 NSKLSW 144
N+ + +
Sbjct: 825 NAFVDY 830
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 53 RLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+L ++ GTL+ + L E++ + V + L + T+++ D NDN P F
Sbjct: 846 KLDRSSGTLRVHKKLDREQNDIHVIPVIARDRGNPSLSSSATVTVVLSDVNDNAPQFESC 905
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+Y L I E+ P+GTVV + A D D+G N+++ +
Sbjct: 906 RYDLWIAENSPIGTVVGTIVARDRDVGHNARIHF 939
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 86 PLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P V T I+ V D DN PIF ++ Y + ED P+GT V V A D D G+N ++ +
Sbjct: 257 PFVSASTTVIVDVLDVQDNAPIFEINSYFAEVREDAPIGTTVASVFARDLDAGLNGEVEY 316
Query: 145 NELEPNG 151
+ E G
Sbjct: 317 SLSETEG 323
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S + F N + K G L R + E H LKV G +P PL T TI + D N
Sbjct: 530 SSSGFEINAISGSIKIRGELDRE-KNETHILKVR--AKDGGDP-PLSDTIIITIHLRDVN 585
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
DN P F Y++++PE P G + V+A D D
Sbjct: 586 DNAPYFEPDVYNVTVPESTPRGAQIISVTAKDDD 619
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVS 110
R+ + G ++ A + L V ++ G P+ + I + D NDN P+F +
Sbjct: 328 RINPSSGVIQTAAELDRETLDVIRLSVFATDKGDPPMSSSALVEITILDVNDNCPVFEMG 387
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y+++I E++ + ++ + A+DAD G N K+ ++
Sbjct: 388 SYNVTIMENITLPAMIIQLKATDADFGENGKVHYS 422
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+ K S+ T T+ V D ND+ P+F SQ + I E+ P+G V V A D D+G
Sbjct: 458 RAKDSSQPAQSSTVTCTVYVADVNDHAPLFVASQQQIFIDENTPLGHEVGRVFAVDQDVG 517
Query: 138 VNS--KLSWNELEPNGL 152
N + S +E +G
Sbjct: 518 TNGIVRYSLDEGSSSGF 534
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G L G C I+V D N P F +++ I E +G+ V + A D D G N+
Sbjct: 667 ATDQGGLKGMCTVFIVVSDVN-APPSFLTHPFTVRISEHSAIGSEVIHLQAEDGDRGTNA 725
Query: 141 KLSWNELEPN-------GLF--SSDL----RVEWVINRSVDQHTN 172
+++ P+ GL +SDL R +V+N +V H +
Sbjct: 726 MITYTIDSPDFAIDEKTGLITVASDLDREVRTTYVVNVTVQDHAS 770
>gi|410928684|ref|XP_003977730.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2917
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + R R E L V T PL+G C TI++ DQNDN P
Sbjct: 846 FDIDPDTGYITTTVSFDRE-RQREFTLSVTATDQADE---PLIGICQITIVIADQNDNGP 901
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F S+Y + ED PVGT +A D D G N+ ++++
Sbjct: 902 KFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAITYS 941
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSL 114
+ V LK+ + E+ +V N K + +C I VED ND+ PIF P S
Sbjct: 1593 RGVIKLKKKVDFEKPQERVFNLTVKAEDADFFSLSC-CLIQVEDSNDHAPIFFPQFYESA 1651
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLFSSDLRVEWVINRSVDQH 170
++ EDV VGT+V V+ASD D G+N + +++ E +P F D V+ S+D+
Sbjct: 1652 ALSEDVAVGTIVTQVTASDLDSGLNGRFTYSISRESDPFSQFLVDPSGWVVVADSLDRE 1710
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K + E + + G P T I V D NDN P F Y +S+ ED
Sbjct: 1178 KASYLMEVQSMDGSESARPGQQGQPNTDTAYVRIFVTDVNDNAPAFAQPLYEVSVEEDKE 1237
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
VG V+ V+A+D D G N+KL + N + + D+ E
Sbjct: 1238 VGFVLITVTANDEDDGANAKLRYQIAAGNNMGTFDVEPE 1276
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 65 LRTEEHWLKVENTKHKGSN-PGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLS--IPEDV 120
L+ ++ L + T S P PL + + + D N+N PIF Q YS + + E+
Sbjct: 751 LKGPQYVLNITATDDNASGGPFPLSSSTQVIVGINDINNNKPIFQECQNYSQNAVVQENQ 810
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
P GT V V A DAD+GVN ++ + + +G+ S
Sbjct: 811 PPGTQVLRVQAHDADMGVNGQVKYGIMHRDGISS 844
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL + V D NDN P F S Y ++PE +GT V VSA+D D G++ + +
Sbjct: 1087 PLASFTTVYVNVTDINDNVPFFLSSTYEATVPEGAQIGTSVAQVSAADLDSGLHGMVHY 1145
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQV 128
H L + + S+ G L + V D+ND P F + YS +PE+V GT +
Sbjct: 549 HNLHLLQVRASESDTG-LTAVAEVVVRVTDENDCTPEFLHAIYSRDGVPENVLAGTSLLQ 607
Query: 129 VSASDADLGVNSKLSW 144
V ASD D G+N++LS+
Sbjct: 608 VVASDCDSGLNAQLSY 623
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IIV D ND+ P+F +S + ED+ V + V VVSA+D D G N+ ++++
Sbjct: 1523 IIVTDVNDHPPVFTQMLFSTQVTEDLEVNSEVLVVSATDEDEGENAVVTFS 1573
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P GT + I V + ND P+F S Y + ED T+V +V A+D D
Sbjct: 666 PRTGTASVRIRVANSNDEAPVFSQSVYKTFLSEDAGPDTLVAIVHANDPD 715
>gi|317418760|emb|CBN80798.1| Cadherin-22 [Dicentrarchus labrax]
Length = 803
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 56 KNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+ GT+ A+ T++ + V G L G+ TI++ D NDN P FP
Sbjct: 213 RKTGTIMTAVADLDRETQDRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQK 272
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
Y S+ E V VGT V V A+DAD+G N+ +S+ E LF VE
Sbjct: 273 MYHFSVSEGVAVGTPVGRVIATDADMGENTDMSYLIKEGGDLFKVTTDVE 322
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D ND+ P F Y S+ E P+GT V V+ASDAD G ++++
Sbjct: 139 PLEPESEFVIKVQDINDSEPKFLEGPYIGSVAELSPIGTAVMNVTASDADDPTYGSSARV 198
Query: 143 SWNELEPNGLFSSDLRVEWVINRSVD 168
++ L+ F+ D + ++ D
Sbjct: 199 VYSVLDGEKFFTVDRKTGTIMTAVAD 224
>gi|149017335|gb|EDL76386.1| rCG49295, isoform CRA_v [Rattus norvegicus]
Length = 862
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++ + ++ T G +P PL T I V D NDN P+F Y
Sbjct: 189 RKYPELVLEKTLDREQQSYYRLVLTALDGGDP-PLSSTTELRIQVTDANDNPPVFDQEVY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+VP GT V V+A+D D GVNS+++++
Sbjct: 248 RVRLPENVPPGTTVARVTATDKDEGVNSEITYS 280
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R L T E+ + + T G P PL + T+ V D NDN P+F + Y + I E+
Sbjct: 405 TLDREL-TPEYNVSIMATD--GGKP-PLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAEN 460
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P G + VSASD DLG N +S+ ++LEP L+S
Sbjct: 461 NPPGASIAQVSASDPDLGSNGHVSYSIIASDLEPKSLWS 499
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK + + G LV C I ++D+NDN P V +IPE+ P
Sbjct: 298 TTQRTLDFEETKEYSIVVEARDGGGLVAQCTVEINIQDENDNKPEITVHSLLETIPENAP 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLF----SSDLRVEWVINRSVDQH 170
GT++ ++ D D G N +++ L+ F SS + V +R++D+
Sbjct: 358 PGTLISLIKIHDRDSGENGEVNCR-LDSEAPFKIISSSKNSYKLVTDRTLDRE 409
>gi|26006183|dbj|BAC41434.1| mKIAA0327 splice variant 1 [Mus musculus]
Length = 939
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G NP GTC + V D NDN P F +Y + +PE+
Sbjct: 204 LERALDREEEAVHHLVLVASDGGNP-VRSGTCRIRVKVLDANDNAPAFTQPEYRVRVPEN 262
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVGT + V+A+DAD G N+++++
Sbjct: 263 TPVGTRILTVTATDADEGYNAQVTY 287
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ + V D NDN P F ++ + S+
Sbjct: 310 TITKSLDYEKAKFHEIDIEAQDGPG-----LLTRTKVIVTVLDVNDNAPEFYMTSATASV 364
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSS-DLRVEWVINRSVDQH 170
PED P+GTV+ + + D D G N+ S E+ P L S D V R++D+
Sbjct: 365 PEDAPLGTVIALFNVHDRDSGQNAVVTCSLPEMLPFKLERSVDSYYRLVTTRALDRE 421
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 63 RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL E+ + + + G +P L + + V D NDN P FP YS IPE+ P
Sbjct: 416 RALDREQFSFYNITVSAKDGGSPS-LSTDAHLLLQVADINDNPPSFPRRVYSAYIPENNP 474
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELE 148
GT + V ASD D N+ ++++ E
Sbjct: 475 RGTSIFSVLASDPDSNDNAHVTYSLAE 501
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ V D NDN P F V L I E G + + SA DAD+G N+ L +L N FS
Sbjct: 129 VEVTDVNDNAPRFGVEDPELKISETTTPGFRIPLKSAHDADVGENT-LQKYKLNSNDHFS 187
Query: 155 SDLRV--------EWVINRSVDQH 170
D+R E V+ R++D+
Sbjct: 188 LDVRTGADGNKYPELVLERALDRE 211
>gi|61316298|ref|NP_001013029.1| protocadherin beta-15 precursor [Pan troglodytes]
gi|62510885|sp|Q5DRD3.1|PCDBF_PANTR RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
Length = 787
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFAQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREITLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|410949740|ref|XP_003981576.1| PREDICTED: cadherin-9 [Felis catus]
Length = 789
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT V + A D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTYVGRIKADDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|395510875|ref|XP_003759693.1| PREDICTED: cadherin-6 [Sarcophilus harrisii]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y PE P GT + + A DAD+G N+++ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTPESAPPGTPIGRIKAIDADVGENAEIEYSITDGEGL 313
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P+F Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPMFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ K+ K + SNP GP T I+VED D P+F
Sbjct: 330 TVKKVLDFEKK--KLYTLKVEASNPRVESRFLYLGPFKDTATVRIMVEDV-DEPPVFGKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y + I ED + + + VSA D D N
Sbjct: 387 AYVMQIREDAQINSTIGSVSAQDPDAAKN 415
>gi|149412791|ref|XP_001507184.1| PREDICTED: cadherin-12 [Ornithorhynchus anatinus]
Length = 794
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D DLG N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDLGKNAEIEYNIVPGDG 313
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 61 LKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
LK+ L E + KVE + H+ + GP T I V D + P+F Y+
Sbjct: 332 LKKPLDFETKKAYTFKVEASNLHLDHRFLSVGPFKDTATVKISVLDVEEP-PVFSKGLYT 390
Query: 114 LSIPEDVPVGTVVQVVSASDADLG 137
+ + ED PVGT++ V+A D DLG
Sbjct: 391 MEVYEDTPVGTIIGAVTAQDLDLG 414
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKAMDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|119514226|gb|ABL75889.1| protocadherin 2G14 [Takifugu rubripes]
Length = 940
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P
Sbjct: 192 KELDREKQHELNLQLTALDGGSPQ-RSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSP 250
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V TVV VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 251 VDTVVMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 294
>gi|11128031|ref|NP_061748.1| protocadherin gamma-B5 isoform 1 precursor [Homo sapiens]
gi|37999830|sp|Q9Y5G0.1|PCDGH_HUMAN RecName: Full=Protocadherin gamma-B5; Short=PCDH-gamma-B5; Flags:
Precursor
gi|5456968|gb|AAD43728.1| protocadherin gamma B5 [Homo sapiens]
gi|119582326|gb|EAW61922.1| hCG1982215, isoform CRA_a [Homo sapiens]
gi|168277486|dbj|BAG10721.1| protocadherin gamma B5 [synthetic construct]
Length = 923
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGHP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
S+ E+VP GT V VSA+D D G+NS+++++ +FS
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFS 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALAS 499
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
>gi|395736277|ref|XP_003780466.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15 [Pongo
abelii]
Length = 787
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ P+G++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFAQALYEVQVPENSPIGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VLKVSARDLDTGTNGEISYS 280
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVRDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKV 381
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
>gi|327276783|ref|XP_003223147.1| PREDICTED: cadherin-10-like [Anolis carolinensis]
Length = 789
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP S I E PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSSVHFRIQESSPVGTPIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V ASDAD+G N++L + ++ +G
Sbjct: 291 VKASDADVGRNAELEYRIVDGDG 313
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P+F Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPMFLEEVYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP I VED D PIF S Y I ED+ VGT++ V A D D
Sbjct: 363 GPFKDATTIKISVEDV-DEPPIFSRSSYLFEIHEDIEVGTIIGTVMARDPD 412
>gi|119514225|gb|ABL75888.1| protocadherin 2G13 [Takifugu rubripes]
Length = 940
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P
Sbjct: 192 KELDREKQHELNLQLTALDGGSPQ-RSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSP 250
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
V TVV VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 251 VDTVVMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 294
>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
Length = 2240
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E H VEN+ T N I VED NDN P+F +Y +S+ E +PVG+V+
Sbjct: 1756 ESHEFGVENS------------TTNVIIYVEDVNDNAPVFSHPEYHISVNESMPVGSVIM 1803
Query: 128 VVSASDADLGVNSKLSW 144
+SASD D+GVNS L +
Sbjct: 1804 KLSASDEDIGVNSLLHF 1820
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L +CN + V D+NDN P F YS+ + ED GT V ++A D D G N L+++
Sbjct: 1190 LADSCNLIVTVSDENDNVPKFQSDVYSIDVVEDARPGTTVLKLTADDFDEGRNGILTYSI 1249
Query: 147 LE-PNGLF 153
E +G F
Sbjct: 1250 AEGADGTF 1257
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I V D NDN PIF + Y S+ E+ P GT V V A DAD G+N + +
Sbjct: 435 TATVFIKVLDVNDNAPIFESAAYEFSVEENQPKGTFVGQVVAHDADFGLNGTVRY 489
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S+ F +P T V L + T H+L V T + P + I V D+N
Sbjct: 723 SMGIFDIDPFTGALFTVRRLDYEM-TNMHFLTVTRT-NTSQTTFPRIKEFPIKIHVLDEN 780
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DN P+F S+PE+ PVGT + + +A+DAD G +L +
Sbjct: 781 DNRPVFSDDPVIFSLPENTPVGTDIWMYNATDADTGKFGRLKY 823
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T+ + L EE + + N + P P +IVED NDN P+F S +S+ ED
Sbjct: 189 TVSKYLDHEERSVILLNIQAVLGYP-PSYNHSQVQVIVEDINDNAPLFDQSYAEISVMED 247
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLF-----SSDLRVEWVINRSVDQHTNK 173
VG + A+D D G+N ++ + + P F S ++R+ NR+ D K
Sbjct: 248 HEVGIALYTAKATDRDSGLNGQIRYRLSVNPENTFMIHPVSGEIRLNH--NRAFDYEKRK 305
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 1 MYLNLIGKGYEYNHWSIS-KLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVG 59
+Y +I K YN W K + ++L G AP + I +A +L+
Sbjct: 1417 VYYTVIEKTIPYNSWVKQVKAIPKQFL------GKSAPQVQYRI---VAGNELKLFSIDQ 1467
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
R ++ + + L + T +NP + T I V D NDN P FP ++ + + ED
Sbjct: 1468 ATDREIK-DHYELILSATDF--ANPSQIT-TAELEITVLDVNDNTPSFPPTK-PVFVKED 1522
Query: 120 VPVGTVVQVVSASDAD 135
+PVG+ + V+A+D D
Sbjct: 1523 IPVGSFIASVTANDVD 1538
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + VED NDN P F Y++S+ + V GT V VVSA+D D G+ ++++
Sbjct: 12 GGLSSSAVIRVSVEDVNDNYPTFYPLVYNVSLRQSVLPGTPVLVVSATDLDSGLFGEVNY 71
>gi|149027277|gb|EDL82944.1| rCG23692 [Rattus norvegicus]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ +V K + SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--RVYTLKVEASNPHIEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVAAQDPDAARN 415
>gi|426246694|ref|XP_004017127.1| PREDICTED: cadherin-18-like isoform 1 [Ovis aries]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ ++ +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIIDGDGV 313
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|110347562|ref|NP_031692.2| cadherin-6 precursor [Mus musculus]
gi|341940302|sp|P97326.2|CADH6_MOUSE RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|76825288|gb|AAI07014.1| Cdh6 protein [Mus musculus]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + + P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAVNRRTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDARINTTIGSVAAQDPDAARN 415
>gi|25453400|ref|NP_037059.1| cadherin-6 precursor [Rattus norvegicus]
gi|1705546|sp|P55280.1|CADH6_RAT RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|435461|dbj|BAA04975.1| K-cadherin [Rattus norvegicus]
Length = 789
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ +V K + SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--RVYTLKVEASNPHIEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKP 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDAQINTTIGSVAAQDPDAARN 415
>gi|444713191|gb|ELW54099.1| Protocadherin gamma-A2 [Tupaia chinensis]
Length = 769
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R+L R EE + T G +P GT + V D NDN P+F +Y +S+PE+
Sbjct: 196 LERSLDREEEAVHHLVLTASDGGDP-VRSGTSRIRVKVLDANDNAPVFTQPEYRVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VPVGT + V+A+DAD G N+++++
Sbjct: 255 VPVGTRILTVTATDADEGYNAQVAY 279
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G N+ L EL P+ FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKSAHDADVGENT-LQKYELSPSDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ RS+D+
Sbjct: 182 VRSGADGNKYPELVLERSLDRE 203
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ R L E+ H + +E G L+ + V D NDN P F ++ + SI
Sbjct: 302 TIIRGLDYEDAKFHEIDIEAQDGPG-----LLTRTKVIVTVLDVNDNAPEFYMTSATSSI 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
PED P GT++ + + D D G N+ ++ + DL + + RSVD +
Sbjct: 357 PEDSPPGTIIALFNVHDRDSGQNAFITCS-------LQEDL--PFKLERSVDNY 401
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 55 YKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
Y+ V T RAL E+ + V T G NP L + + V D NDN P F YS
Sbjct: 402 YRLVTT--RALDREQFSFYNVTLTAKDGGNPS-LSMDAHVFLQVADINDNPPAFSRKSYS 458
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+PE+ P G + V A D D G N+ ++++
Sbjct: 459 AYVPENNPRGASIFSVMAHDPDSGNNAHVTYS 490
>gi|76827148|gb|AAI07009.1| Cdh6 protein [Mus musculus]
gi|148671304|gb|EDL03251.1| cadherin 6 [Mus musculus]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + + P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAVNRRTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDARINTTIGSVAAQDPDAARN 415
>gi|301612247|ref|XP_002935630.1| PREDICTED: cadherin-10-like [Xenopus (Silurana) tropicalis]
Length = 815
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 58 VGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
G ++ AL EH+ V K G G L GT I + D NDN P F + Y
Sbjct: 242 TGIIRTALPNMNRENREHYQVVIQAKDMGGQMGGLSGTTTVNITLSDVNDNPPRFSQNSY 301
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+S+PE VG+ V + A+DAD+G N+++ + L+
Sbjct: 302 HISVPETATVGSTVGRIKATDADIGKNAEVEYRILD 337
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP TC I VED D P+F Y + ED+ +GT++ V A D D
Sbjct: 390 GPFKDTCTVKISVEDV-DEPPVFSRPSYMFKVHEDIELGTIIGTVMARDPD 439
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P F Y+ S+PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 175 IKIHDINDNEPTFLEEVYTASVPEMSDVGTYVVQVTAADADDPSYGNSAKVIYSILQGQP 234
Query: 152 LFS 154
FS
Sbjct: 235 YFS 237
>gi|1783299|dbj|BAA11516.1| cadherin-6 [Mus musculus]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 152 LFS 154
FS
Sbjct: 207 YFS 209
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV + K SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLRWKASNPHVEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + V+A D D N
Sbjct: 387 AYILQIREDARINTTIVSVAAQDPDAARN 415
>gi|354508290|ref|XP_003516186.1| PREDICTED: protocadherin alpha-9-like, partial [Cricetulus griseus]
Length = 306
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E +++ T G P L GT I V D NDN P+F S Y++ +PE+
Sbjct: 80 LRKPLDREEAAEMRLLLTATDGGKPE-LTGTVQLLITVLDVNDNAPVFDRSLYTVKLPEN 138
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
VP GT+V V+ASD+D GVN ++ ++ FSSD+
Sbjct: 139 VPNGTLVIKVNASDSDEGVNGEVMYS-------FSSDI 169
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL+G C + V D NDN P V L + ED +G V+ ++S +D D GVN +++ +
Sbjct: 213 PLIGHCTVLVEVVDANDNAPQLNVKTLWLPVKEDAQLGKVIALISVTDLDAGVNGQVTCS 272
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P+FP +Q +L IPE + + + ASDAD+G N+ L++ L N F+ D
Sbjct: 7 VRDINDNPPMFPTTQKTLFIPESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFALD 65
Query: 157 L 157
+
Sbjct: 66 V 66
>gi|354479104|ref|XP_003501753.1| PREDICTED: cadherin-6 [Cricetulus griseus]
gi|344245509|gb|EGW01613.1| Cadherin-6 [Cricetulus griseus]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S Y PE P GT + + ASDAD+G N+++ ++ + G
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGENAEIEYSITDGEG 312
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
FI N T ++ KR R E+ + L+ + + P + I + D NDN
Sbjct: 101 FIINENT---GDIQATKRLDREEKPVYILRAQAVNRRTGRP--VEPESEFIIKIHDINDN 155
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PIF Y+ ++PE VGT V V+A+DAD G ++K+ ++ L+ FS
Sbjct: 156 EPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFS 209
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+V+D D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPHVEPRFLYLGPFKDSATVRIVVDDV-DEPPVFSKL 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVN 139
Y L I ED + T + VSA D D N
Sbjct: 387 AYILQIREDAQINTTIGSVSAQDPDAARN 415
>gi|126291029|ref|XP_001377921.1| PREDICTED: protocadherin gamma-A11-like [Monodelphis domestica]
Length = 841
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+R L E+ H+L + T G +P GT + V D NDN P+F S+YS+S+P
Sbjct: 196 LERVLDREKENVHYLTL--TAWDGGDP-IRSGTARVRVTVLDINDNPPVFSQSEYSVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VP GT++ V+ASD D GVN +++++
Sbjct: 253 ENVPKGTLLLTVNASDPDEGVNGEVTYS 280
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F + K AN Y + T++ R + V T G P PL + ++ V D
Sbjct: 392 FKLEKSYAN-----YYRLMTVRDLDREQVSEYNVTVTATDGGTP-PLTTSTQISLHVADS 445
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
NDN P F + YS +PE+ P + ++ASD D G N+ ++++
Sbjct: 446 NDNPPNFRQASYSAYVPENNPRAASIYSMTASDLDSGENAHITYS 490
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G + G L+ + V D NDN P V+ + SIPE P GTV+ +++ D D G N
Sbjct: 320 QGQDGGGLLARTKIKVTVLDVNDNTPEVIVASLTSSIPEHSPSGTVIALLNVHDRDSGDN 379
Query: 140 SKL 142
++
Sbjct: 380 GQV 382
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 33 GMYAPAFTFSIAKFIANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGT 90
G+ A + S A+ I+ NV G+L A R + L PG L
Sbjct: 54 GLDPRALSESGARTISKGKKHFSLNVRSGSLVTADRIDREEL----------CPGTLKCL 103
Query: 91 CNTTIIVEDQ-------------NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
N I+++D+ ND+ P F V + + I E+ VGT + +A D DLG
Sbjct: 104 LNVEILMDDKVNIYGVEVEVMDINDHAPRFRVDEVEIKISENAAVGTSFPLPNARDPDLG 163
Query: 138 VNSKLSWNELEPNGLFS 154
+NS ++ +L PN FS
Sbjct: 164 INSLQNY-QLSPNHHFS 179
>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
Length = 4376
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 54 LYKNVGTLK--RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
L +N G LK +A+ E W +++ H N PLV + I V+D NDN PIF
Sbjct: 2768 LDRNTGVLKVRKAMDYESTKWYQIDLMAHCPHNDTPLVSLVSVNIQVKDVNDNRPIFEAD 2827
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-----LFSSDLRVEWV 162
Y + E++PVGT V V+A+D D G + ++S+ G LF+ D W+
Sbjct: 2828 PYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPADPGSNIHELFAIDSETGWI 2884
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVE--NTKHKGSNPGPLVGTCNTTIIVEDQND 102
KF +P T G L R ++ LKVE + KG L + I +ED ND
Sbjct: 890 KFSLHPLTGELAVTGHLDRE-SEPQYILKVEARDQPRKGHQ---LFSVTDLKITLEDAND 945
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFSSD 156
N+P SL +PED+P GTV+ + ASD D+G ++ + L + +G F D
Sbjct: 946 NSPQCITELSSLKVPEDLPPGTVLTFLDASDPDVGPAGEVRYVLLDDAHGTFQVD 1000
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF NP ++ T + L E +V K + G V C II+ D+NDN
Sbjct: 2553 KFSINPNGQI-----TTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKIILTDENDNP 2607
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F S+Y++SI +V + V V A DAD G N+ ++++
Sbjct: 2608 PQFKASEYTVSIQSNVSKDSPVIQVLAYDADEGRNADVTYS 2648
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V+D NDN P FP Y +++ E+ VGT + + A DAD N ++ + L P F
Sbjct: 832 TVNVKDWNDNAPRFPPGGYQITVSENAEVGTTIAELKAKDADSDDNGRVRYTLLSPTEKF 891
Query: 154 S 154
S
Sbjct: 892 S 892
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DQND P+F Y ++I ED+P+ + + V+A+DADLG N+K +
Sbjct: 164 DQNDLKPLFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAKFYY 209
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 89 GTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
G +TT++++ D N++ PIF S Y + E++P GT + V+A+D D G N ++++
Sbjct: 462 GLASTTVVIDIVDCNNHAPIFNRSSYDGTFDENIPPGTSILTVTATDRDHGENGYITYSI 521
Query: 147 LEPNGL-FSSD 156
P + FS D
Sbjct: 522 SRPKAVPFSID 532
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 93 TTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
TTI+V D N++ P FP Y+ + E+ VG VV VSA+D D VNS ++++ + N
Sbjct: 3332 TTIVVNITDVNEHRPRFPQDLYTTRVLENAAVGDVVLTVSATDEDGPVNSAITYSLVGGN 3391
Query: 151 GL 152
L
Sbjct: 3392 QL 3393
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ +ED NDN+P F + Y I + G V+ VSA+D DLGVN +++ E F
Sbjct: 2083 VSIEDVNDNHPEFKHAPYYTVIQDGTEPGDVLCQVSATDQDLGVNGAVTYAFAEDYAYFR 2142
Query: 155 SD 156
D
Sbjct: 2143 ID 2144
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
++VED NDN P F Y+ S+ E +P T V + ASD D G N +S+ +E
Sbjct: 2285 VLVEDVNDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYQIVE 2338
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G + T+ VED NDN P F S ++++ ++ V T V VV A D D G N
Sbjct: 3113 KATDGGGQSCQADVTLYVEDVNDNAPSFFPSHCAVAVFDNTTVKTPVAVVLARDPDQGAN 3172
Query: 140 SKLSWN 145
+++ ++
Sbjct: 3173 AQVVYS 3178
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ +P T L L R + +EH L+V T P L T + + D NDN P
Sbjct: 1210 FVLHPLTGLLSTARQLDRENK-DEHILEV--TVLDNGEPS-LKSTSRVVVRILDVNDNPP 1265
Query: 106 IFPVSQYSLSIPEDVPVGT--VVQVVSASDADLGVNSKLSWN-ELEPNGLFSSD 156
+F +++ +PE + T V + ASD D G+N +++++ E G FS D
Sbjct: 1266 VFSHKLFNVRLPERLSPATPGPVYRLVASDPDEGLNGRVTYSIEESDEGSFSID 1319
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S+A F N T + + + L R +WL V +GS P L I V+D N
Sbjct: 1101 SLAAFSINKDTGMIQTLAPLDRE-SVSCYWLTVLAVD-RGSIP--LSSVTEVYIEVKDVN 1156
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DN P + S+ ED P+ T V + A D D KL++N
Sbjct: 1157 DNPPRMSRPVFYPSVREDAPLHTSVLQLDAWDPDSSSKGKLTFN 1200
>gi|395510863|ref|XP_003759687.1| PREDICTED: cadherin-18-like [Sarcophilus harrisii]
Length = 790
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+++ + + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGTNAEMKYTIINGDGI 313
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRWTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|9965298|gb|AAG10032.1|AF282973_3 protocadherin-beta9 [Homo sapiens]
Length = 536
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPSR-SGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 255 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 295
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|57043475|ref|XP_544306.1| PREDICTED: protocadherin beta-15 [Canis lupus familiaris]
Length = 795
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + +K R E+ L+V T G +P P G I+V D NDN P F Y
Sbjct: 189 RKYPELVLVKELDREEQAELRVTLTALDGGSP-PRSGAAQVRILVLDVNDNAPEFVQKLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+ PVG +V VSA D D G N ++S++
Sbjct: 248 QVQVPENSPVGMLVVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDAGANAQVTYSLLPP 493
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+G ++V D ND++P FP + +L I E P GTV + A D D+G N+ +++ +
Sbjct: 114 LGVFRAELLVRDINDHSPEFPEREMTLKILETSPPGTVFALKKAQDLDVGNNNIQNYS-I 172
Query: 148 EPNGLFSSDLR 158
PN F R
Sbjct: 173 SPNSHFRVSTR 183
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ +I V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGRCSVSIEVVDVNDNFPELTISSLTSPIPENSP-ETEVALFRVRDRDSGDN 378
Query: 140 SKLSW 144
K++
Sbjct: 379 GKMTC 383
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K VG L R E K T H P + I+V D NDN
Sbjct: 1840 KFSLDKETGVLKTVGQLDR-----ETQAKYSLTAHVQDRDKPTWECSSQLEILVSDLNDN 1894
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F +S YS ++PEDV +GT+V V A+D D+G+N K+ +
Sbjct: 1895 APKFTMSTYSSTLPEDVEIGTLVTKVHATDDDIGINRKIRY 1935
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T V +K L E+ K N +N TCN + V D+NDN P
Sbjct: 490 FFVNPST----GVIVIKNELDYEK--TKFFNLTVSATNMAGASATCNVIVHVLDRNDNAP 543
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE--PNGLFSSD 156
F + YS I E +G++V V+ A DAD +N+ L+++ +E P F D
Sbjct: 544 RFLQALYSGEISEGASIGSLVLTNTSAPLVIKAEDADSELNALLNYDIVEDLPRKYFHID 603
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
TL R L E H + V S+P PL T+ V D+ND+ P F + Y++S+
Sbjct: 1539 TLARPLDRELKDSHLIGV--LAETDSSP-PLTALAEITLQVLDENDHAPKFESNPYAISL 1595
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
E++ GT + V A D DLG N ++ ++ F SD+
Sbjct: 1596 AENIEEGTSILKVIAHDKDLGSNGEVRYS-------FGSDI 1629
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L+G + + V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 1982 LMGIASLIVNVQDINDNPPEFASKLYFAKVPEIYAVGTEVARVLATSKDTGVNADIYYS 2040
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y + ED G
Sbjct: 2069 RARDYFLTIQAID--GGIP-PLSNHATVNITVTDSNDNAPIFSEVSYRAFVREDAKTGEK 2125
Query: 126 VQVVSASDADLGVNSKLSW 144
V + A+D D N +S+
Sbjct: 2126 VTQIYANDLDSEENGNVSY 2144
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 39/99 (39%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI PT+ + G + + L VE H P V + + D NDN P
Sbjct: 803 FIIGPTSGAIRTNGIRFDREVCDHYELIVEAKSHPPDREKPRVAHVIVNVTILDINDNCP 862
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y + D G ++ V A D D G N ++ +
Sbjct: 863 MFVNLPYYAVVSVDAQKGDIITKVHAIDMDSGDNGEVRY 901
>gi|190338128|gb|AAI62806.1| Cdh7 protein [Danio rerio]
Length = 787
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F P T + + + + R R + +L V K G L GT + T+ + D NDN
Sbjct: 199 FSVEPKTGIVRTALPNMDREAR--DQYLLVIQAKDMVGQMGGLSGTTSVTVTLTDVNDNP 256
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P F Y ++PE +PV +VV + A D+D+G N+++ + +E +GL
Sbjct: 257 PRFSRKSYQFAVPESLPVASVVAKIKALDSDIGPNAEMDYRIIEGDGL 304
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + + P+ I V+D NDN P F Y+ +
Sbjct: 100 DIHATKRLDREEQAYYTLRAQARDRATNLPVEPESEFVIKVQDINDNEPKFLDGPYNAQV 159
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V A+DAD G ++++ ++ LE FS
Sbjct: 160 PEMSPVGTSVVEVKATDADDPTYGNSARVVYSILEGQPYFS 200
>gi|62510878|sp|Q5DRC6.1|PCDB8_PANTR RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; Flags:
Precursor
Length = 801
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 256 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG L N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++
Sbjct: 430 PG-LTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
Query: 144 WNELEPN 150
++ L P
Sbjct: 489 YSLLPPQ 495
>gi|348537988|ref|XP_003456474.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2929
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + R R E+ L V T PL+G C T+ + DQNDN+P
Sbjct: 806 FDIDPDTGVITTAVSFDRE-RQREYTLSVTATDQAEE---PLIGICQITVQISDQNDNDP 861
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F S+Y + ED PVGT +A D D G N+ ++++
Sbjct: 862 KFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAITYS 901
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 95 IIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPN 150
I VED ND+ P+F P S ++ EDVPVGT+V V+ASD D G N + S++ E +P
Sbjct: 1612 IQVEDSNDHAPVFFPQFYESPAMSEDVPVGTIVAQVTASDLDSGQNGRFSYSISKESDPY 1671
Query: 151 GLFSSDLRVEWVINRSVDQ 169
F D V+ S+D+
Sbjct: 1672 NQFLVDQSGWVVVADSLDR 1690
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ +G P T I V D NDN P F Y +S+ ED VG V+ V+A+D D
Sbjct: 1160 SARQGQQGQPNTDTAYVRIFVTDVNDNAPAFAQPVYEVSVEEDKEVGFVLITVTANDEDE 1219
Query: 137 GVNSKLSWNELEPNGLFSSDLRVE 160
G N+KL + N + + D+ E
Sbjct: 1220 GANAKLRYQITSGNTMGTFDVEPE 1243
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 56 KNVGTLKRA----LRTEEHWLKVENTKHKGSN-PGPLVGTCNTTIIVEDQNDNNPIFPVS 110
K + L+R+ LR ++ L + T S P PL + + + D N+N P+F
Sbjct: 698 KGIIKLRRSPPPHLRGPQYVLNITATDDNASGGPYPLSSSAQVIVGINDINNNKPLFKEC 757
Query: 111 Q-YSL--SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
Q YSL ++ E+ P GT V V A DAD+GVN ++ + + +G+ S
Sbjct: 758 QNYSLNAAVLENQPPGTFVLRVQAHDADMGVNGEVKYGIMNRDGVAS 804
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + V D NDN P F S Y ++PE +GT V VSA+D D G++ + +
Sbjct: 1054 PLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAQMGTSVAQVSATDLDSGLHGMIHYV 1113
Query: 145 ---NELEPNGLFSSDLRVEWVINRS 166
+E + FS D + R+
Sbjct: 1114 ILKDESGDSQFFSIDSHSGIIFTRA 1138
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 18 SKLLESRYLHLR-PKSGMYAPAFTFSIAKFIANPTT----RLYKNVGTLKRALRT----- 67
+ ++E R + L P G A T+SI K I N + GT+ LR+
Sbjct: 1422 TSVMEMRAMDLDDPNEGRNA-LLTYSIIKNIRNEINLNLFSINATTGTIYTVLRSLDREM 1480
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E+ +L V + G GT TI+V D ND+ PIF Y+ + ED+ V + V
Sbjct: 1481 EDRYLVVVEARDGGGL----AGTGTATIMVSDVNDHPPIFTQRLYNTQVTEDLEVNSEVL 1536
Query: 128 VVSASDADLGVNSKLSWN 145
VVSA+D D G N+ ++++
Sbjct: 1537 VVSATDGDEGENAVVTFS 1554
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L + + D+ND P F S Y+ +IPE + GT + V A D D G+NS++S+
Sbjct: 525 LSSVAEVVVHITDENDCTPEFLHSIYTRDNIPESIAPGTSLLQVLARDCDSGINSEISY 583
>gi|348536026|ref|XP_003455498.1| PREDICTED: protocadherin-8-like [Oreochromis niloticus]
Length = 902
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + +K R + VE G NP G+ TI V D NDN+P+F + +S+
Sbjct: 197 YAELVLMKELDRETQSSYTVELVATDGGNPY-RSGSSKITIKVTDFNDNSPVFDQNSFSV 255
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
S+PED PVGTV+ ++A DAD G+N ++ +
Sbjct: 256 SLPEDAPVGTVILDLNAVDADEGLNGEVVY 285
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TI + D+NDN P F + Y +S+ E+ G + V A+DADLG N K+++
Sbjct: 446 PLRKITQYTIRLTDENDNAPHFAKAVYEVSVVENNAPGAYITTVEATDADLGNNGKITYR 505
Query: 146 ELE 148
+E
Sbjct: 506 LVE 508
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 97 VEDQNDNNPIF---PVSQYSLSI--PEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+ DQNDN P P+ + S + P+D P G VV + A+DAD G+N++LS+ E
Sbjct: 567 IVDQNDNQPSIIEPPLYKGSAEVFLPKDAPAGYVVTQIKATDADEGINAQLSYKITE 623
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN+P FP + + I E+ VG+ + + A DAD+G N S+ ++ N F+ D
Sbjct: 129 IKDINDNSPEFPNKESIVEISENAAVGSRIPLDPAVDADVGSNYIQSY-QISVNSHFTID 187
Query: 157 LRV--------EWVINRSVDQHTN 172
+ + E V+ + +D+ T
Sbjct: 188 VLLRADGVKYAELVLMKELDRETQ 211
>gi|345309006|ref|XP_001515584.2| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 850
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T G +P GT + V D NDN P+F S Y + +PED
Sbjct: 196 LERVLDREEEAVHHLVLTASDGGDP-VRSGTVRIRVKVLDANDNAPVFTQSVYEVKVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVGT+V V+A+D D G+N++++++
Sbjct: 255 APVGTLVVTVNATDPDEGINAEVTYS 280
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 30 PKSGMYAPAFTFSIAKFIANPTTRLYK------NVGTLKRALRTEEHWLKVENTKHKGSN 83
P G+ A T+S K I + T+R+++ + TLK E + ++E G +
Sbjct: 269 PDEGINA-EVTYSFRK-IRDKTSRIFQLNAVTGEISTLKNLDYQESEYYEMEIQAQDGRD 326
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
L + + D NDN P ++ + S+ ED P GTV+ +++ D D G
Sbjct: 327 ---LFARAKVQVTIVDVNDNAPEVTITSLTSSVSEDSPPGTVIALLNVHDRDSG 377
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T+ V D NDN P F YS+ IPE+ P G V V+A D D N++++++
Sbjct: 431 PLSAHTYITLHVTDTNDNPPAFEQKAYSVYIPENNPRGASVFRVTARDPDSEENARVTYS 490
Query: 146 ELEPNG 151
E G
Sbjct: 491 ISEKPG 496
>gi|223460164|gb|AAI36802.1| Protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 256 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|333440480|ref|NP_061993.2| protocadherin beta-8 precursor [Homo sapiens]
gi|145559514|sp|Q9UN66.3|PCDB8_HUMAN RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; AltName:
Full=Protocadherin-3I; Flags: Precursor
Length = 801
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 256 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F N T + K V L R + H LK+E + + N L + VED NDN P
Sbjct: 837 FTINSETGVIKAVAPLDRE-KQHTHLLKIE-ARDQAENEPQLFSHVLLKVTVEDVNDNPP 894
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSD 156
+F S Y + + ED+PVGTV+ + A D D+G++ ++ ++ LE +G F D
Sbjct: 895 VFIPSNYHVKVREDLPVGTVITWLDAYDPDVGLSGQVRFSLLENGDGKFEVD 946
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G VG C +I+ D NDN P F ++Y +SI DVP GT + V ASD+D G N+ + +
Sbjct: 2543 GGKVGFCIVNVILTDSNDNVPQFRATEYKVSIASDVPRGTPIVKVIASDSDEGANADIFY 2602
Query: 145 N 145
+
Sbjct: 2603 S 2603
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF NP T + + +L + E++L VE T G P PL + I V D NDN
Sbjct: 3245 GKFTINPVTGMIFIIASLDYE-TSPEYYLTVEATD--GGTP-PLSDVASVNINVTDVNDN 3300
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSD-LRVE 160
+P+F + Y+ + ED G V +V A DAD +N+ + ++ E P F D +R E
Sbjct: 3301 SPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGE 3360
Query: 161 WVINRSVDQH 170
+N+ +D+
Sbjct: 3361 VKVNKLLDRE 3370
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-- 144
++ + + +I+V+D NDN P+F + Y I E++P GT V V A D D+G N ++S+
Sbjct: 2758 IISSVDVSILVKDVNDNAPVFDSNPYKAFIVENLPEGTKVVQVRAFDLDVGSNGQVSYML 2817
Query: 145 ---NELEP-NGLFSSDLRVEWV 162
+LE LFS D WV
Sbjct: 2818 GHSQDLEEIKELFSVDRETGWV 2839
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF NP T G LK +L + L+V + K ++ G + +ED NDN
Sbjct: 3038 KFHLNPFT------GELKTSLPLDREILEVYHLMVKATDGGGRFCQAAVELTLEDVNDNA 3091
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFSSD 156
P F Y++++ E+ T + V A DADLG+N K+ ++ + G FS D
Sbjct: 3092 PEFSADPYTVTVYENTEPQTPLLRVQAIDADLGLNHKVQYSLVSSAEGQFSID 3144
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D ND P+F + YS+S+PE+ + + + V+A+DAD+G N + ++ E +F+
Sbjct: 108 VLDTNDLRPLFSPTSYSVSLPENTAIRSSIAKVTATDADIGTNGEFYYSFKERTDMFA 165
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
II+ED NDN P+F Y+ ++ E +GT V ++A D D G N+ +S++ +E +G S
Sbjct: 2240 IILEDVNDNPPVFREKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISFHLVETSGNIS 2299
Query: 155 SDLRVE 160
++
Sbjct: 2300 QYFHID 2305
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P V + VED NDNNP+F Y + D P G +++ V+A D D+G N ++++
Sbjct: 2029 PTVAHVLVQVTVEDVNDNNPVFVNLPYYAMVQIDAPEGHLIRHVTAVDRDIGKNGEITY 2087
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
D NDN P+F +Y S+ ED PVGT V V A+ D+ VN+++++ + N
Sbjct: 3191 DINDNPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIEVNAEITYKIISGN 3242
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 89 GTCNTTIIVE----DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT T +VE D NDN P+ + Y+ +I ED G V+ V+ASDAD+ N+++ +
Sbjct: 2970 GTFATKAVVEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADIRSNAEIIY 3029
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDN--NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
K +G P L C + + D N+N P+F SI EDVP+GT V VSA D D
Sbjct: 973 KDRG-KPVSLSSACYINVELIDVNENLHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDED 1031
Query: 136 LGVNSKLSWNELEPNGL 152
G + ++ ++ + +G+
Sbjct: 1032 TGRDGEIRYSIRDGSGV 1048
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV-------QVVSAS 132
+ +N L T+ V D+NDN P+F + Y I E P +VV V+ A+
Sbjct: 1707 QATNMAGLSTNSTLTVHVRDENDNFPVFAQTNYRGLISESAPPNSVVLTDDNIPLVIRAT 1766
Query: 133 DADLGVNSKLSWNELEPN 150
D+D N+ L + +EP+
Sbjct: 1767 DSDQESNALLVYQIVEPS 1784
>gi|148678185|gb|EDL10132.1| mCG133388, isoform CRA_o [Mus musculus]
Length = 930
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R EE + G NP P GT T+ V D NDN P+F ++Y ++IPE+
Sbjct: 194 LEQALDREEEAIHHLVLVASDGGNP-PRSGTVLITVTVFDANDNAPVFTSTEYRVNIPEN 252
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N ++++
Sbjct: 253 LPVGTQLLKVTATDKDEGANGEVTY 277
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L K+ G +K + + + + + + G + T I VED NDN+P ++
Sbjct: 291 QLDKHTGEIKISENLDYEEMSFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 350
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED PVGTV+ +++ D D G N +++ +
Sbjct: 351 FSPVTEDSPVGTVIALLNVHDLDSGQNGEVACS 383
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 62 KRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+RAL E+ + T G NP PL + T+ V D NDN P F Y IPE+
Sbjct: 405 QRALDREQVPAYNITVTATDGGNP-PLSTKADFTLQVADINDNPPTFSHPSYFTYIPENN 463
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P G + V+A D D N+++ ++ E
Sbjct: 464 PRGASIFSVTALDPDSKENAQIVYSLAE 491
>gi|403256580|ref|XP_003920947.1| PREDICTED: uncharacterized protein LOC101030360 [Saimiri boliviensis
boliviensis]
Length = 1858
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 61 LKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL EE L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 1496 LDRALDYEEKAELRLTLTALDGGSP-PRSGTTLVLIQVLDINDNAPEFPQSLYEVQVPED 1554
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G + K+S+ S D+R + IN
Sbjct: 1555 KPIGSWIVTISAKDLDAGNHGKISYTFFHA----SEDVRKTFEIN 1595
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I + D NDN P F Y + I ED
Sbjct: 865 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEILDVNDNAPEFEQPFYRVQISED 923
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G +V VSA+D D GVN ++S++
Sbjct: 924 SPIGFLVVKVSATDVDTGVNGEISYS 949
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND++P+F + L IPE+ PVG V + SA D+D+GVN+ S+ + PN F
Sbjct: 123 VRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDSDVGVNAVKSYT-ISPNSHFHIK 181
Query: 157 LRV--------EWVINRSVD 168
+RV E V+++++D
Sbjct: 182 MRVNPDNRKYPELVLDKALD 201
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++TFS A + T +++ G + + ++ + + ++ G L G I V
Sbjct: 278 SYTFSHASEDIHKTFEIHQKSGEITLTAPLDFESIESYSMIIQATDGGGLFGKSTVRIQV 337
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P VS + IPE+ P TVV V S D D G N K++ +
Sbjct: 338 MDVNDNAPEITVSSITSPIPENTP-ETVVMVFSIRDRDSGDNGKMTCS 384
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ +PE+
Sbjct: 972 LKKQLDFEK--LQSYEVNVEARDAGTFSGKCTVLIQVMDVNDHAPEVTMSAFTSPVPENA 1029
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D N K+S +
Sbjct: 1030 P-ETVVALFSVSDLDSEENGKVSCS 1053
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F ++ + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 1423 VKDINDHSPTFLDNEILIKISEGTTIGTTFLLESAQDLDVGSNSLQNYT-ISPNSHFYIR 1481
Query: 154 ---SSDLRV--EWVINRSVD 168
S D ++ E V++R++D
Sbjct: 1482 IPDSGDRKIYPELVLDRALD 1501
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVG 89
KS +P F I K NP R Y + L +AL EE L T G +P P G
Sbjct: 168 KSYTISPNSHFHI-KMRVNPDNRKYPEL-VLDKALDYEEQPELSFILTALDGGSP-PRSG 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T ++V D NDN+P F + Y + I E+ +G++V VSA D D G N +LS+
Sbjct: 225 TALVRVVVVDVNDNSPEFEQAFYEVEILENSILGSLVVTVSAWDLDSGTNGELSY 279
>gi|119582380|gb|EAW61976.1| protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 256 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|395736266|ref|XP_003776723.1| PREDICTED: protocadherin beta-2 [Pongo abelii]
Length = 798
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G +P P GT I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTALDGGSP-PRSGTALVRIEVVDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V +VSA D D G N ++S+
Sbjct: 257 SPVGSQVAIVSARDLDTGTNGEISY 281
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++TFS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYTFSQASEDIRKTFRLSAKSGELILRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLINQIPENLQ-DTLIAVFSVSDPDSGDNGRM 383
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++ L P
Sbjct: 438 NITVLVSDVNDNAPFFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYLLLPPQ 496
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
>gi|344265078|ref|XP_003404614.1| PREDICTED: protocadherin gamma-A10-like [Loxodonta africana]
Length = 819
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G +P GT ++ V D NDN P+F + +Y +S+PE+
Sbjct: 196 LERALDREEEAMHHLVLTASDGGDPL-RSGTALVSVTVFDTNDNAPVFTLPEYQVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 255 LPVGTRLLTVTATDRDEGANGEVTYS 280
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P PL + T+ V D NDN P F YS IPE+ P+G + V+A D D
Sbjct: 423 TATDGGSP-PLSTEIHLTLHVADINDNPPAFSYVSYSTYIPENNPIGVSIFSVTAHDPDS 481
Query: 137 GVNSKLSWNELE 148
N++++++ E
Sbjct: 482 EKNARVTYSLTE 493
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 40 TFSIAKFIANPTTRLYK-----NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTT 94
T+S K P T L K N G +K + + + + + G + T
Sbjct: 278 TYSFRKL---PDTHLLKFQLNENTGEIKISENLDYEETDSYEIEIQAEDGGAYLATAKVL 334
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I VED NDN+P + + ED P GTV+ +++ D D G N +++
Sbjct: 335 ITVEDVNDNSPEVTTTSVFSPVTEDSPPGTVIALLNVHDLDSGQNGQVTC 384
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F + I E+VP G + A D D+GVN+ S+ +L N FS
Sbjct: 121 IEVTDINDNAPKFQAENLDVKINENVPPGMRFPLPEAVDPDVGVNALQSY-QLSQNKHFS 179
Query: 155 SDLRV----------EWVINRSVDQH 170
LRV E V+ R++D+
Sbjct: 180 --LRVQSRANGIKYPELVLERALDRE 203
>gi|18087771|ref|NP_291071.1| protocadherin gamma-A10 precursor [Mus musculus]
gi|13876324|gb|AAK26082.1| protocadherin gamma A10 [Mus musculus]
gi|23273433|gb|AAH35540.1| Protocadherin gamma subfamily A, 10 [Mus musculus]
Length = 930
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R EE + G NP P GT T+ V D NDN P+F ++Y ++IPE+
Sbjct: 194 LEQALDREEEAIHHLVLVASDGGNP-PRSGTVLITVTVFDANDNAPVFTSTEYRVNIPEN 252
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N ++++
Sbjct: 253 LPVGTQLLKVTATDKDEGANGEVTY 277
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L K+ G +K + + + + + + G + T I VED NDN+P ++
Sbjct: 291 QLDKHTGEIKISENLDYEEMSFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 350
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED PVGTV+ +++ D D G N +++ +
Sbjct: 351 FSPVTEDSPVGTVIALLNVHDLDSGQNGEVACS 383
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 62 KRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+RAL E+ + T G NP PL + T+ V D NDN P F Y IPE+
Sbjct: 405 QRALDREQVPAYNITVTATDGGNP-PLSTKADFTLQVADINDNPPTFSHPSYFTYIPENN 463
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P G + V+A D D N+++ ++ E
Sbjct: 464 PRGASIFSVTALDPDSKENAQIVYSLAE 491
>gi|301753533|ref|XP_002912596.1| PREDICTED: protocadherin beta-16-like [Ailuropoda melanoleuca]
Length = 796
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R+Y + + R E + + T G +P P GT I V D NDN P F Y
Sbjct: 189 RMYPELVLEEELDREVEPEIVLTLTALDGGSP-PRYGTAQVLIEVVDSNDNAPEFGQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPE+ PVG++V VSASD D G+ K+S+ +P+ S L V E + + V
Sbjct: 248 KVHIPENSPVGSLVVTVSASDLDSGIYGKISYTLFQPSEDISKTLEVNPVTGEIRLKKQV 307
Query: 168 DQHT 171
D T
Sbjct: 308 DFET 311
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NLTVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 493
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS-- 154
VED ND++P+F + L IPE+ P+G + +A D D+G N+ ++ ++ PN F
Sbjct: 123 VEDINDHSPVFTEKEMILKIPENSPLGIAFPLSNALDLDVGSNNVQNY-KISPNSQFRVL 181
Query: 155 ----SDLRV--EWVINRSVDQH 170
SD R+ E V+ +D+
Sbjct: 182 TRKLSDGRMYPELVLEEELDRE 203
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPEVTMSALTSPIPENSP-EIVVAVFSVSDPDSGDN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
>gi|45383842|ref|NP_989465.1| cadherin-20 precursor [Gallus gallus]
gi|82244296|sp|Q8QGH3.1|CAD20_CHICK RecName: Full=Cadherin-20; AltName: Full=F-cadherin; AltName:
Full=MN-cadherin; Flags: Precursor
gi|19698397|gb|AAL93123.1|AF459439_1 MN-cadherin [Gallus gallus]
Length = 798
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 209 GQPYFSVDSRTGLIRTALMNMDREAKEYYEVIVQAKDMGGQLGGLAGTTTVNITLSDVND 268
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 269 NPPRFPQKHYQMSVLESAPVSSTVGRVVAKDLDEGINAEMKYSLVDGDGLDVFDINTD 326
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+++ L E K K +G+NP GP T I VED D P+F S
Sbjct: 335 TVRKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFRDTTTVHISVEDV-DEPPVFEPS 391
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +G +Q++SA D D+ NS
Sbjct: 392 FYFVEVPEDVEIGATIQIISAKDPDVTNNS 421
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 106 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 162
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 163 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 218
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F N T + K V L R + H LK+E + + N L + VED NDN P
Sbjct: 869 FTINSETGVIKAVAPLDRE-KQHTHLLKIE-ARDQAENEPQLFSHVLLKVTVEDVNDNPP 926
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-PNGLFSSD 156
+F S Y + + ED+PVGTV+ + A D D+G++ ++ ++ LE +G F D
Sbjct: 927 VFIPSNYHVKVREDLPVGTVITWLDAYDPDVGLSGQVRFSLLENGDGKFEVD 978
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G VG C +I+ D NDN P F ++Y +SI DVP GT + V ASD+D G N+ + +
Sbjct: 2575 GGKVGFCIVNVILTDSNDNVPQFRATEYKVSIASDVPRGTPIVKVIASDSDEGANADIFY 2634
Query: 145 N 145
+
Sbjct: 2635 S 2635
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF NP T + + +L + E++L VE T G P PL + I V D NDN
Sbjct: 3277 GKFTINPVTGMIFIIASLDYE-TSPEYYLTVEATD--GGTP-PLSDVASVNINVTDVNDN 3332
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSD-LRVE 160
+P+F + Y+ + ED G V +V A DAD +N+ + ++ E P F D +R E
Sbjct: 3333 SPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGE 3392
Query: 161 WVINRSVDQH 170
+N+ +D+
Sbjct: 3393 VKVNKLLDRE 3402
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-- 144
++ + + +I+V+D NDN P+F + Y I E++P GT V V A D D+G N ++S+
Sbjct: 2790 IISSVDVSILVKDVNDNAPVFDSNPYKAFIVENLPEGTKVVQVRAFDLDVGSNGQVSYML 2849
Query: 145 ---NELEP-NGLFSSDLRVEWV 162
+LE LFS D WV
Sbjct: 2850 GHSQDLEEIKELFSVDRETGWV 2871
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF NP T G LK +L + L+V + K ++ G + +ED NDN
Sbjct: 3070 KFHLNPFT------GELKTSLPLDREILEVYHLMVKATDGGGRFCQAAVELTLEDVNDNA 3123
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFSSD 156
P F Y++++ E+ T + V A DADLG+N K+ ++ + G FS D
Sbjct: 3124 PEFSADPYTVTVYENTEPQTPLLRVQAIDADLGLNHKVQYSLVSSAEGQFSID 3176
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D ND P+F + YS+S+PE+ + + + V+A+DAD+G N + ++ E +F+
Sbjct: 140 VLDTNDLRPLFSPTSYSVSLPENTAIRSSIAKVTATDADIGTNGEFYYSFKERTDMFA 197
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
II+ED NDN P+F Y+ ++ E +GT V ++A D D G N+ +S++ +E +G S
Sbjct: 2272 IILEDVNDNPPVFREKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISFHLVETSGNIS 2331
Query: 155 SDLRVE 160
++
Sbjct: 2332 QYFHID 2337
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P V + VED NDNNP+F Y + D P G +++ V+A D D+G N ++++
Sbjct: 2061 PTVAHVLVQVTVEDVNDNNPVFVNLPYYAMVQIDAPEGHLIRHVTAVDRDIGKNGEITY 2119
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
D NDN P+F +Y S+ ED PVGT V V A+ D+ VN+++++ + N
Sbjct: 3223 DINDNPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIEVNAEITYKIISGN 3274
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 89 GTCNTTIIVE----DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT T +VE D NDN P+ + Y+ +I ED G V+ V+ASDAD+ N+++ +
Sbjct: 3002 GTFATKAVVEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADIRSNAEIIY 3061
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDN--NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
K +G P L C + + D N+N P+F SI EDVP+GT V VSA D D
Sbjct: 1005 KDRG-KPVSLSSACYINVELIDVNENLHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDED 1063
Query: 136 LGVNSKLSWNELEPNGL 152
G + ++ ++ + +G+
Sbjct: 1064 TGRDGEIRYSIRDGSGV 1080
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV-------QVVSAS 132
+ +N L T+ V D+NDN P+F + Y I E P +VV V+ A+
Sbjct: 1739 QATNMAGLSTNSTLTVHVRDENDNFPVFAQTNYRGLISESAPPNSVVLTDDNIPLVIRAT 1798
Query: 133 DADLGVNSKLSWNELEPN 150
D+D N+ L + +EP+
Sbjct: 1799 DSDQESNALLVYQIVEPS 1816
>gi|28193991|gb|AAO33355.1|AF465257_1 F-cadherin [Gallus gallus]
Length = 798
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 209 GQPYFSVDSRTGLIRTALMNMDREAKEYYEVIVQAKDMGGQLGGLAGTTTVNITLSDVND 268
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 269 NPPRFPQXHYQMSVLESAPVSSTVGRVVAKDLDEGINAEMKYSLVDGDGLDVFDINTD 326
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+++ L E K K +G+NP GP T I VED D P+F S
Sbjct: 335 TVRKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFRDTTTVHISVEDV-DEPPVFEPS 391
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +G +Q++SA D D+ NS
Sbjct: 392 FYFVEVPEDVEIGATIQIISAKDPDVTNNS 421
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 106 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 162
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 163 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 218
>gi|61806606|ref|NP_001013538.1| cadherin-6 precursor [Danio rerio]
gi|54306049|dbj|BAD66654.1| cadherin 6 [Danio rerio]
Length = 794
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 35 YAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-------RTEEHWLKVENTKHKGSNPGPL 87
Y+ +SI + +P + N G ++ AL EH+ V K G L
Sbjct: 188 YSAKLAYSIKE--GHPYFSVEPNTGIIRTALGPTDMDREQREHYQVVIEAKDMAGQKGGL 245
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+G+ I + D NDN P F Y S+PE VG+ V + A DAD+G N+++S++
Sbjct: 246 IGSTTVNISLTDINDNAPHFKQGIYQFSVPELTKVGSSVGRIEAEDADIGRNAEMSYS 303
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + + D NDN P F Y+ S+PE +GT V V+A DAD G ++KL
Sbjct: 133 PLEPETEFIVKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGYSAKL 192
Query: 143 SWNELEPNGLFS 154
+++ E + FS
Sbjct: 193 AYSIKEGHPYFS 204
>gi|402872813|ref|XP_003900295.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-16 [Papio
anubis]
Length = 743
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P GT I V D NDN P F Y
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSP-PRSGTAQVHIEVVDINDNAPEFEQPIY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
+ IPE+ +G++V VSA D D G N K+S++ +P+ S L V
Sbjct: 248 KVRIPENSSLGSLVATVSARDLDSGANGKISYSLFQPSEDISKMLEV 294
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
V D ND++PIF + L IPE+ P+GT + A D+D+G N+ ++ ++ PN F
Sbjct: 123 VIDINDHSPIFTEKEIILKIPENSPLGTEFPLYHALDSDVGSNNVQNY-KISPNSHF 178
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T+ + D NDN P F + Y+ + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVQISDVNDNAPAFTQTFYTFFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPRV 495
Query: 152 L 152
L
Sbjct: 496 L 496
>gi|326917111|ref|XP_003204846.1| PREDICTED: cadherin-20-like, partial [Meleagris gallopavo]
Length = 632
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 220 GLIRTALMNMDREAKEYYEVIVQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQ 279
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E PV + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 280 MSVLESAPVSSTVGRVVAKDLDEGINAEMKYSLVDGDGLDVFDINTD 326
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 60 TLKRALRTEE---HWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
T+++ L E + LKVE + + N GP T I VED D P+F S Y
Sbjct: 335 TVRKPLSFESKKSYTLKVEGANPHLEMRFLNLGPFRDTTTVHISVEDV-DEPPVFEPSFY 393
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ +PEDV +G +Q++SA D D+ NS
Sbjct: 394 FVEVPEDVEIGATIQIISAKDPDVTNNS 421
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 106 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 162
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 163 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 218
>gi|395735679|ref|XP_002815500.2| PREDICTED: cadherin-18 [Pongo abelii]
Length = 781
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 206 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 265
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 304
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 92 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 148
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 149 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 202
>gi|116875770|ref|NP_001070916.1| cadherin-7 [Danio rerio]
gi|89242690|gb|ABD64678.1| cadherin-7 type II [Danio rerio]
Length = 787
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F P T + + + + R R + +L V K G L GT + T+ + D NDN
Sbjct: 199 FSVEPKTGIVRTALPNMDREAR--DQYLLVIQAKDMVGQMGGLSGTTSVTVTLTDVNDNP 256
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P F Y ++PE +PV +VV + A D+D+G N+++ + +E +GL
Sbjct: 257 PRFSRKSYQFAVPESLPVASVVAKIKALDSDIGPNAEMDYRIIEGDGL 304
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ KR R E+ + + + P+ I V+D NDN P F Y+ +
Sbjct: 100 DIHATKRLDREEQAYYTLRAQARDRATNLPVEPESEFVIKVQDINDNEPKFLDGPYNAQV 159
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE PVGT V V A+DAD G ++++ ++ LE FS
Sbjct: 160 PEMSPVGTSVVEVKATDADDPTYGNSARVVYSILEGQPYFS 200
>gi|403256574|ref|XP_003920944.1| PREDICTED: uncharacterized protein LOC101029397 [Saimiri boliviensis
boliviensis]
Length = 2294
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I++ D NDN P F Y + +PE+
Sbjct: 1881 LDQALDREEQTQLRLTLTALDGGSP-PRTGTSQVLIVIVDINDNAPEFAQRLYEVQVPEN 1939
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G++V VSA+D D G +LS++
Sbjct: 1940 TPIGSLVVTVSATDLDSGTYGELSYS 1965
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I V D NDN P F Y + +PE+ P+G++
Sbjct: 1295 REEQPRLRLTLTALDGGSP-PRSGTSEIQIQVLDINDNVPEFAQELYEVQVPENNPLGSL 1353
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V VSA D D G ++S+ LF D
Sbjct: 1354 VITVSARDLDAGSFGEVSY------ALFQDD 1378
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 61 LKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L + T G P P GT ++V D NDN P F S Y + IPE+
Sbjct: 697 LDKALDREERPELSLTLTALDGGAP-PRSGTTTVRVVVLDNNDNAPEFLQSLYEVQIPEN 755
Query: 120 VPVGTVVQVVSASDADLGV 138
V +++ VSA D D G
Sbjct: 756 SSVNSLIIAVSARDLDAGA 774
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 61 LKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
LKRAL E + VE G G L G C I V D NDN P +S S PE+
Sbjct: 803 LKRALDFEATPYYNVEIIATDG---GGLSGKCTVAIEVVDVNDNAPELTLSTLSSPTPEN 859
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
P TVV V S SD D G N ++
Sbjct: 860 AP-ETVVAVFSVSDPDSGDNGRM 881
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++++D ND++P+FP + L IPE+ GT+ ++ A D D+G N L + PN F
Sbjct: 120 LMIQDINDHSPVFPAREVLLKIPENSQPGTLFPLLIAEDLDVGSNG-LQKYTISPNSHF 177
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L++AL EE ++ + + ++ G L G C+ + V D NDN P +S IPE++
Sbjct: 1395 LRKALDFEE--VQSYDVDVEATDGGGLTGKCSLVVRVLDVNDNAPELTMSFLISPIPENL 1452
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
+V V S SDAD G N ++
Sbjct: 1453 -AEIIVAVFSVSDADSGHNQQV 1473
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + + S+ G L C I V D NDN P +S IPE+
Sbjct: 1988 LKKVLDFEE--IQSYHVEVEASDGGGLSEKCTVAIEVMDINDNVPELTMSLLVSDIPENS 2045
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV V SD D G N K+
Sbjct: 2046 P-ETVVAVFGISDPDSGNNGKI 2066
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 1530 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGSNAQVTYSLLPPQ 1586
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ +K N + + + G L G I V D NDN P +S + SIPE+
Sbjct: 302 LKKKLDFEK--IKSYNVEIEAIDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENA 359
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV + D D G N K+
Sbjct: 360 P-ETVVSIFRIRDRDSGDNGKM 380
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y ++ K R E+ + G +P P GT I++ D NDN P F + Y
Sbjct: 188 RKYPDLVQDKPLDREEQPEFSLTLVALDGGSP-PRSGTVMVRILIIDVNDNAPEFVHTPY 246
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ + E+ P+ + + V A DAD G +S++
Sbjct: 247 RVQVLENSPLDSPILRVLARDADAGNFGSVSYD 279
>gi|402872842|ref|XP_003900308.1| PREDICTED: protocadherin gamma-B5 [Papio anubis]
Length = 818
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGDP-PLSGTTELRIQVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+ E+VP GT V VSA+D D G+NS+++++
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYS 280
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+ E
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHISDVNDNAPVFHQASYLVSVAE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + V ASD DLG+N ++S+ ++LEP L S
Sbjct: 460 NNPPGASIAQVCASDPDLGLNGQVSYSIMASDLEPLALAS 499
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK +G + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMIVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND+ P F + + L I E GT + A DAD G+NS KLS N
Sbjct: 123 IEDINDHTPTFTQNSFELQISESAQPGTRFILEVAEDADTGLNSLQKYKLSLN 175
>gi|9965297|gb|AAG10031.1|AF282973_2 protocadherin-beta8 [Homo sapiens]
Length = 610
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 6 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 64
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 65 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 107
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 130 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 188
Query: 140 SKLSWN 145
K+S +
Sbjct: 189 GKISCS 194
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 246 NMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 304
>gi|73949415|ref|XP_849426.1| PREDICTED: protocadherin gamma-A7 [Canis lupus familiaris]
Length = 822
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T G NP P T + V D ND+ P+F + QY +S+PE+
Sbjct: 195 LERVLDREEEAVHHLLLTASDGGNP-PRSETARIQVTVVDVNDHAPVFSLPQYQVSVPEN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT++ V A D D G+N +++++
Sbjct: 254 MPVGTILLTVHAVDLDEGLNGEVTYS 279
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 40 TFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIV 97
T +I++ + R N L A + L V N K ++ G P + ++ V
Sbjct: 382 TCTISENLPFKLERSIDNYYRLVTAKNLDREKLSVYNITLKATDGGTPPRSSETHISMNV 441
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P FP S YS+ IPE+ P G + V+A D D N+ ++++
Sbjct: 442 ADTNDNPPAFPQSSYSVYIPENNPRGASIFSVTAHDPDSQENAHVTYS 489
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG + I + D NDN P V+ S IPED P+GTVV + D D G N +++
Sbjct: 324 PGSMT-RAKVMITILDVNDNTPEVTVTSVSNLIPEDTPLGTVVALFYLQDRDSGENGEVT 382
Query: 144 W 144
Sbjct: 383 C 383
>gi|345308131|ref|XP_001508795.2| PREDICTED: cadherin-9 isoform 1 [Ornithorhynchus anatinus]
Length = 790
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D NDN P FP S Y
Sbjct: 216 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQ 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
E VP+GT + + A+D DLG N+++++ E +G
Sbjct: 276 FRCLESVPLGTSLGRIKANDPDLGSNAEMAYGVTEGDG 313
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L V K G V + II + D NDN P F Y
Sbjct: 106 ENTGDIHAAKKLDREEKALYVLRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFGQDVY 165
Query: 113 SLSIPEDVPVGT-VVQVVS--ASDADLGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V+QV++ A DA+ G ++K+ ++ L+ FS D
Sbjct: 166 TASVPEMSAVGTSVIQVLATDADDANYGNSAKIVYSILQGQPYFSVD 212
>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
Length = 3089
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 26 LHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGS--- 82
+ +R KS AP T+S+A + L+ + ++ A+ T + + E KH+ +
Sbjct: 319 VSVRDKS---APGLTYSMAAVGDLRSNSLF-GINSVSGAIYTVNYLDREEIAKHQFTVTA 374
Query: 83 --NPGP--LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
N G L + TI V D+NDN P F Y +SIPED+P+GT V A D D
Sbjct: 375 TVNDGTTTLFSRVSVTIDVLDRNDNAPRFESPSYQVSIPEDIPIGTTALQVRAQDNDASS 434
Query: 139 NSKLSWNELEPNGLFSSDLRV-----EWVINRSVDQH 170
N++++++ + G+ +S RV +I+RS+D+
Sbjct: 435 NARVTYSIVNSAGI-NSAFRVGVTSGAIIIDRSLDRE 470
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L G + I + D NDN P+F Y+ SI EDV +GT V V+A+D D GVN ++ +
Sbjct: 896 LSGRTDVVISILDSNDNAPVFSQPSYNASIAEDVEIGTRVLQVAATDKDEGVNQQIHFEL 955
Query: 147 LE---PNGLFSSD 156
E NG F+ D
Sbjct: 956 AENENGNGTFAID 968
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
+L R + T+ + L+++ T S P N TIIV D NDN P F Y ++I ED
Sbjct: 466 SLDREI-TDRYHLEIQATD---SGTTPKFARSNVTIIVTDVNDNPPQFTQKNYKVTIAED 521
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+ T+V V A+D D N+ + ++
Sbjct: 522 AKINTLVTTVRATDPDNDDNADIRYS 547
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
LR +E+ L V+ + L T + V D N++ P F + Y+ I ED +GT
Sbjct: 778 LREKEYTLVVQASDLL------LNSTATVKMRVIDTNNHAPTFDRA-YTADIYEDTAIGT 830
Query: 125 VVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV-INRSVDQHT 171
V+ V+A DAD N++L++ + P F D + + I ++D+ T
Sbjct: 831 VILTVTAKDADANENARLTYRIVTPVREFKIDSKSGAISIAAALDRET 878
>gi|351713343|gb|EHB16262.1| Cadherin-20 [Heterocephalus glaber]
Length = 801
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + L+ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTILDGDGTDTFDINTD 327
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + + EDV +GT +Q++SA D D+ NS
Sbjct: 390 EPDFYLVEVLEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVSVTIEVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|432910748|ref|XP_004078505.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3255
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP + + + R R E L V T PL+G C T+++ DQNDN+P
Sbjct: 1129 FDINPDSGVITTAVSFDRE-RQREFTLSVTATDQAEE---PLIGICQITVLILDQNDNDP 1184
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F S+Y + ED PVGT +A D D G N+ ++++
Sbjct: 1185 KFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAITYS 1224
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L GT TI+V D ND+ PIF YS + ED+ V + + VVSA+D D G N+ +++
Sbjct: 1817 GGLSGTGTATIMVLDVNDHPPIFTERVYSAKVTEDLEVNSEILVVSATDGDRGENAVVTF 1876
Query: 145 N 145
+
Sbjct: 1877 S 1877
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 56 KNVGTLKRA----LRTEEHWLKVENTKHKGSN-PGPLVGTCNTTIIVEDQNDNNPIFPVS 110
K + L+R+ LR ++ L + T S P PL + + + D N+N P+F
Sbjct: 1021 KGIIKLRRSPPPRLRGPQYVLNITATDDNASGGPFPLSSSAQVIVGINDINNNKPVFEEC 1080
Query: 111 Q-YSL--SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
Q YSL ++ E+ P GT V V A DAD+G+N ++ + + +G+ S
Sbjct: 1081 QDYSLNAAVLENQPPGTFVLRVQARDADMGLNGEVKYGIMHRDGVSS 1127
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQ 111
+L K V K RT LK E+ + I VED ND+ P+F P
Sbjct: 1901 KLKKKVDFEKPQERTFNLTLKAEDND--------FFSLAHCLIQVEDSNDHAPVFFPQFY 1952
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLFSSDLRVEWVINRSVD 168
S ++ EDVPVGT++ V+ASD D G N S++ + +P F D V+ S+D
Sbjct: 1953 ESPAMSEDVPVGTIIAQVTASDLDSGQNGHFSYSISKDSDPYNQFLVDQSGWVVVANSLD 2012
Query: 169 Q 169
+
Sbjct: 2013 R 2013
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P T I + D NDN P F Y +S+ ED VG ++ V+A+D D G N+
Sbjct: 1487 GQQGQPNTDTAYVRIFITDVNDNAPAFAQPVYEVSVEEDKEVGFILITVTANDEDEGANA 1546
Query: 141 KLSWNELEPNGLFSSDLRVE 160
KL + N + + D+ E
Sbjct: 1547 KLRYQITSGNTMGTFDVEPE 1566
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL I V D NDN P F S Y ++PE VGT V VSA+D D G++ + +
Sbjct: 1377 PLASFTTVYINVTDVNDNVPFFLSSTYEATVPEGAQVGTSVAQVSATDLDSGLHGMIHYT 1436
Query: 145 ---NELEPNGLFSSDLRVEWVINRS 166
+E + FS D ++ R+
Sbjct: 1437 ILKDESGDSQFFSIDSASGVIVTRA 1461
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L ++ + D+ND P F S Y+ +IPE + GT + V A D D GVNS+LS+
Sbjct: 848 LSSVAEVSVHITDENDCTPEFLHSIYTRDNIPESIAAGTSLLQVLARDCDSGVNSELSY 906
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P GT + I V + ND P+F S Y + ED T+V +V A+D D
Sbjct: 949 PRTGTASIRIRVANSNDEAPVFSQSVYKTFLSEDAGPDTLVAIVHANDPD 998
>gi|426350419|ref|XP_004042771.1| PREDICTED: protocadherin beta-15 [Gorilla gorilla gorilla]
Length = 571
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAQLRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVGENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
>gi|309266756|ref|XP_003086854.1| PREDICTED: protocadherin gamma-A10-like, partial [Mus musculus]
Length = 458
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 61 LKRALRTEE----HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
L+ AL EE H + V + G NP P GT T+ V D NDN PIF ++Y ++I
Sbjct: 194 LEHALDREEEAIHHLILVAS---DGGNP-PRSGTVLITVTVFDTNDNAPIFTSTEYRVNI 249
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
PE++PVGT + V+A+D D G N ++++
Sbjct: 250 PENLPVGTQLLKVTATDKDEGANGEVTY 277
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L K+ G +K + + + + + + G + T I VED NDN+P ++
Sbjct: 291 QLDKHTGEIKISENLDYEEISFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 350
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED PVGTV+ +++ D D G N +++ +
Sbjct: 351 FSPVTEDSPVGTVIALLNVHDLDSGQNGEVTCS 383
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN PIF S Y + + E P G+ + VSA+D D G N
Sbjct: 2344 AHDGPHEGHANLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2403
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2404 ISYHLASPAEGFSVD 2418
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT + R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1801 GTTRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1859
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D PVGT++ + A D D G N ++ +
Sbjct: 1860 DAPVGTLLLQLQAHDPDEGDNGRVMY 1885
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + +
Sbjct: 2574 PRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFT 2633
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2634 LSSGDPLGLFELD 2646
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P+ ++++D NDN+P FP + ++ +P++ GT V + A D D G NS
Sbjct: 862 GSGTPPVFSAARIRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPVYTLRALDPDSGANS 921
Query: 141 KLSWNELE-PNGLFSSD 156
+++++ L +GLF+ D
Sbjct: 922 RVTFSLLAGGDGLFTVD 938
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1586 RLHATTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--STQLLTVSVVDVNDEAPAF 1642
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
P +Y++ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1643 PQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNSGVLTTLR 1700
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + V G P PLV + ++ ++D NDN P
Sbjct: 515 FSIDPTSGIITTAATLDYELEPQPQLIVVAT---DGGLP-PLVSSATVSVALQDVNDNEP 570
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 571 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 610
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L + LE
Sbjct: 2686 TVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAMDGDAGTFGRLRYTLLE 2740
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL+ + VED+ND++P F + SL +PE T+ + ASD D G+N +L +
Sbjct: 1723 PLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQTLT-TLRASDPDGGLNGQLQYR 1781
Query: 146 EL--EPNGLFSSDLRV-EWVINRSVDQ 169
L +P+G F+ DL E+ R +D+
Sbjct: 1782 ILGGDPSGAFALDLTSGEFGTTRPLDR 1808
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT +++ +QND++P L++ E+ P GT V
Sbjct: 1060 ELYTLKVMAVSGSKAELGQQTGTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1119
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1120 RVFATDKDSGPNGRLTYS 1137
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2250 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2305
Query: 147 LEPNG 151
L P+G
Sbjct: 2306 LSPSG 2310
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 657 GGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSY 716
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 717 HILAGNSPPLFALDAHSGLLTVAWPLGRRAN 747
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1477 PALRLDARTGALSAPRGLDRETTPALLLIVEATDRPANASRRKATRVSARVFVTDENDNA 1536
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1537 PVF-ASPSRMRLPEDQPPGPAALHVVARDPDLGEAARVSY 1575
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 116 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPAHDADAG 167
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV----GTVVQVVSASDADL 136
G+ GPL T T+ V D ND+ P FP S L +P P + + A D D
Sbjct: 1927 GAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLRAEDRDA 1986
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1987 GANASI 1992
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 205 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 260
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 261 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 302
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A DAD
Sbjct: 2465 LKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEAIDAD 2503
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1148 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDAGSPPRSATGTVHVAVL--DLNDNSP 1203
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
F + + +P+ VP GT+V + A D D G N +
Sbjct: 1204 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTI 1246
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 782 PIFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LTLSGGDPRGLFSLD 834
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN PIF S Y + + E P G+ + VSA+D D G N
Sbjct: 2331 AHDGPHEGHANLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2390
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2391 ISYHLASPAEGFSVD 2405
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT + R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1788 GTTRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1846
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D PVGT++ + A D D G N ++ +
Sbjct: 1847 DAPVGTLLLQLQAHDPDEGDNGRVMY 1872
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + +
Sbjct: 2561 PRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFT 2620
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2621 LSSGDPLGLFELD 2633
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P+ ++++D NDN+P FP + ++ +P++ GT V + A D D G NS
Sbjct: 849 GSGTPPVFSAARIRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPVYTLRALDPDSGANS 908
Query: 141 KLSWNELE-PNGLFSSD 156
+++++ L +GLF+ D
Sbjct: 909 RVTFSLLAGGDGLFTVD 925
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1573 RLHATTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--STQLLTVSVVDVNDEAPAF 1629
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
P +Y++ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1630 PQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNSGVLTTLR 1687
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + V G P PLV + ++ ++D NDN P
Sbjct: 502 FSIDPTSGIITTAATLDYELEPQPQLIVVAT---DGGLP-PLVSSATVSVALQDVNDNEP 557
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 558 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 597
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L + LE
Sbjct: 2673 TVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAMDGDAGTFGRLRYTLLE 2727
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL+ + VED+ND++P F + SL +PE T+ + ASD D G+N +L +
Sbjct: 1710 PLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQTLT-TLRASDPDGGLNGQLQYR 1768
Query: 146 EL--EPNGLFSSDLRV-EWVINRSVDQ 169
L +P+G F+ DL E+ R +D+
Sbjct: 1769 ILGGDPSGAFALDLTSGEFGTTRPLDR 1795
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT +++ +QND++P L++ E+ P GT V
Sbjct: 1047 ELYTLKVMAVSGSKAELGQQTGTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1106
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1107 RVFATDKDSGPNGRLTYS 1124
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2237 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2292
Query: 147 LEPNG 151
L P+G
Sbjct: 2293 LSPSG 2297
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 644 GGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSY 703
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 704 HILAGNSPPLFALDAHSGLLTVAWPLGRRAN 734
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1464 PALRLDARTGALSAPRGLDRETTPALLLIVEATDRPANASRRKATRVSARVFVTDENDNA 1523
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1524 PVF-ASPSRMRLPEDQPPGPAALHVVARDPDLGEAARVSY 1562
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 103 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPAHDADAG 154
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV----GTVVQVVSASDADL 136
G+ GPL T T+ V D ND+ P FP S L +P P + + A D D
Sbjct: 1914 GAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLRAEDRDA 1973
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1974 GANASI 1979
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 192 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 247
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 248 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 289
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A DAD
Sbjct: 2452 LKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEAIDAD 2490
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1135 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDAGSPPRSATGTVHVAVL--DLNDNSP 1190
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
F + + +P+ VP GT+V + A D D G N +
Sbjct: 1191 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTI 1233
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 769 PIFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LTLSGGDPRGLFSLD 821
>gi|402871213|ref|XP_003899572.1| PREDICTED: cadherin-18 [Papio anubis]
Length = 734
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 159 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 218
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 219 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 257
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 45 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 101
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 102 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 155
>gi|426246696|ref|XP_004017128.1| PREDICTED: cadherin-18-like isoform 2 [Ovis aries]
Length = 574
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ ++ +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIIDGDGV 313
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|345328642|ref|XP_001507394.2| PREDICTED: protocadherin beta-3-like [Ornithorhynchus anatinus]
Length = 798
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R + + +K R E+ + + T G +P P GT I+V D NDN P F QY
Sbjct: 192 RKFPELVLVKALDREEQSEIYLTITALDGGSP-PRSGTAGVHILVVDINDNTPEFTQPQY 250
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ IPE+ P G++V VSA+D D G+N ++++
Sbjct: 251 EVQIPENSPKGSLVTTVSANDIDTGINGEIAY 282
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
IIV+D ND++P+F + L+I E+ P G ++ SA D D+G NS + + PN F
Sbjct: 124 IIVDDINDHSPVFQDKEIILNIFENSPAGAEFRIPSAEDLDIGSNSIQEYT-ISPNSYF 181
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+++ D NDN P+F + Y+ I E+ + V A D D G N+++S++ L P
Sbjct: 439 NITVLISDVNDNPPVFNQTVYTFYIRENNSPALHIGSVQAMDRDSGQNARVSFSLLPP 496
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L + V D NDN P +S + IPE+ P TVV V S SD D G N
Sbjct: 323 QASDGGGLSAKSAVRVQVLDVNDNRPKITISSINSPIPENSP-ETVVAVFSISDRDSGDN 381
Query: 140 SKL 142
K+
Sbjct: 382 GKM 384
>gi|194219801|ref|XP_001917807.1| PREDICTED: protocadherin gamma-A7 [Equus caballus]
Length = 837
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L R L R EE + T G +P P GT + V D ND+ P+F + QY +++PE+
Sbjct: 196 LDRVLDREEEAVHHLLLTASDGGSP-PRSGTARIRVTVVDVNDHAPVFFLPQYQVTVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V+A+D D GVN +++++
Sbjct: 255 VPVGTRLLAVNATDLDEGVNGEVTYS 280
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 40 TFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIV 97
T +I++ + R N L A + L V N K ++ G PL + + V
Sbjct: 383 TCTISENLPFKLERSIDNYYRLVTAENLDREKLSVYNITLKATDGGTPPLSTETHILVNV 442
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P FP S YS+ IPE+ P G + V+A D D N+ ++++
Sbjct: 443 ADTNDNPPAFPHSSYSVFIPENNPRGASIFSVTAHDPDSDENAHVTYS 490
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
I + D NDN P V+ S SIPED P GTV+ + D D G N +++
Sbjct: 335 ITILDVNDNAPEVTVTSVSSSIPEDTPPGTVIALFYLQDRDSGKNGEVT 383
>gi|8926617|gb|AAF81913.1|AF217749_1 protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 255 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 295
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|390470196|ref|XP_002807360.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Callithrix jacchus]
Length = 3297
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E+ P G+ + VSA+D D G N
Sbjct: 2350 AHDGPHEGYANLTVLVEDVNDNAPAFSQSLYQVMLLENTPPGSAILSVSATDRDSGANGH 2409
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2410 ISYHLASPADGFSVD 2424
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P F V YS+ +PE
Sbjct: 1807 GTMRPLDREVEPAFQLKIEARDGGQPA-LSATLLLTVTVLDANDHAPAFSVPAYSVEVPE 1865
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 1866 DVPAGTLLLQLQAHDPDAGANGRVTY 1891
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + L + + +P+GLF D
Sbjct: 2595 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLLHFTVSSGDPSGLFELD 2652
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R E H L V + H GS P T T+ V D ND P F +YS+ + E
Sbjct: 1604 GPLDREQRAE-HVLTVMASDH-GSPPRS--ATQVLTVSVADVNDEAPTFQQQEYSVLLRE 1659
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+ P GT + + A+D DLG N ++++
Sbjct: 1660 NSPPGTSLLTLRATDPDLGANGQVTY 1685
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 967 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 1026
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 1027 RVTFTLLAGGG 1037
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T + K TL+ R E+ + + +P P + + VED+N
Sbjct: 1689 SSESFSLDPDTGVLK---TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTIRVAVEDEN 1744
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1745 DHTPTFGSAHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1801
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2692 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2746
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + L R + E + + + +P LVG+ T++V D NDN P
Sbjct: 2219 FHVDPATGIITTIAILDREIWAETRLVLIATDR---GSPA-LVGSATLTVMVIDTNDNRP 2274
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P + L + ED +G+ + V+ +D D G + W L P+G
Sbjct: 2275 TIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYALSPSG 2316
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ S+ P GT V V A D D G + +LS+
Sbjct: 762 GGLKSMVYVKVFLSDENDNPPQFYPREYATSLSAQSPPGTAVLRVRAHDPDQGSHGRLSY 821
Query: 145 NELEPN--GLFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 822 HILAGNSPALFALDEQSGLLTVAWPLARRAN 852
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ ++D NDN P F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 656 PLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 715
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI+V D ND+ P FP S L +P P + + + A D D
Sbjct: 1933 GAAAGPLSTTVSVTIMVRDVNDHAPTFPTSPLRLRMPRPGPSFSTPTLPLATLRAEDRDA 1992
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1993 GANASI 1998
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2471 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2509
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 310 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 365
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 366 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 407
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L +PE GT + A DAD G
Sbjct: 221 PDGATVEVTVRVADINDHAPAFPQARAALQVPEHTVFGTRYPLEPAHDADAG 272
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1165 ELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1224
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1225 RVFATDRDSGPNGRLTYS 1242
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS GT + ++ D NDN+P
Sbjct: 1253 FRIHPQTGELTTLQTLDREQQSSYQLLV--QVQDGGSPSRSTTGTVHVAVL--DLNDNSP 1308
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
F + + +P+ VP GT+V + A D D G N + + P FS
Sbjct: 1309 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPAQSFS 1363
>gi|380796719|gb|AFE70235.1| protocadherin-16 precursor, partial [Macaca mulatta]
Length = 1815
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 325 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 383
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 384 DVPAGTLLLQLQAHDPDAGANGRVTY 409
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 868 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 927
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 928 ISYHLASPADGFSVD 942
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 1113 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 1170
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G KL ++ LE
Sbjct: 1210 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGKLRYSLLE 1264
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T + + TL+ R E+ + + +P P + + VED+N
Sbjct: 207 SSGSFSLDPDTGV---LTTLRALDREEQEEINLTVYAQDRGSP-PQLTHATIRVAVEDEN 262
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 263 DHAPTFGSTHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 319
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L + L E EH L V + H GS P T T+ V D ND P F
Sbjct: 110 RLHSSTGALSVVQPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 166
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+YS+ + E+ GT + + A+D DLG N ++++ + +G FS D
Sbjct: 167 QQQEYSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVS-SGSFSLD 214
Score = 42.4 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 774 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 829
Query: 147 LEPNG 151
L P+G
Sbjct: 830 LSPSG 834
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 451 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 510
Query: 137 GVNSKL 142
G N+ +
Sbjct: 511 GANASI 516
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 989 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 1027
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 51 VFVTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 99
>gi|9256610|ref|NP_061758.1| protocadherin beta-15 precursor [Homo sapiens]
gi|13431379|sp|Q9Y5E8.1|PCDBF_HUMAN RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
gi|5457037|gb|AAD43755.1|AF152494_1 protocadherin beta 15 [Homo sapiens]
gi|14009449|gb|AAK51610.1|AF217742_1 protocadherin-beta15 [Homo sapiens]
Length = 787
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|397518010|ref|XP_003829193.1| PREDICTED: protocadherin beta-9 [Pan paniscus]
Length = 797
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 255 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 295
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ V VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHVGSVSATDGDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
Length = 798
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+++ D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|426385074|ref|XP_004059058.1| PREDICTED: cadherin-18 [Gorilla gorilla gorilla]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|14195616|ref|NP_061992.2| protocadherin beta-9 precursor [Homo sapiens]
gi|13431372|sp|Q9Y5E1.2|PCDB9_HUMAN RecName: Full=Protocadherin beta-9; Short=PCDH-beta-9; AltName:
Full=Protocadherin-3H; Flags: Precursor
gi|11142065|gb|AAD43763.2|AF152502_1 protocadherin beta 9 [Homo sapiens]
gi|85662638|gb|AAI05641.1| Protocadherin beta 9 [Homo sapiens]
gi|119582378|gb|EAW61974.1| protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 255 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 295
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|24416520|gb|AAH38797.1| Protocadherin beta 15 [Homo sapiens]
gi|123993279|gb|ABM84241.1| protocadherin beta 15 [synthetic construct]
gi|124000241|gb|ABM87629.1| protocadherin beta 15 [synthetic construct]
Length = 787
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + V A+D D G N++++++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVRATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|189053489|dbj|BAG35655.1| unnamed protein product [Homo sapiens]
Length = 787
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 123 VTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFHVS 181
Query: 157 LRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 182 TRTRGDGRKYPELVLDTELDRE 203
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + V A+D D G N++++++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVRATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|380786417|gb|AFE65084.1| cadherin-18 isoform 1 preproprotein [Macaca mulatta]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|355749836|gb|EHH54174.1| Cadherin-14 [Macaca fascicularis]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|119582372|gb|EAW61968.1| protocadherin beta 15 [Homo sapiens]
Length = 787
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G +P P GT I+V D NDN P F + Y + +PE+ PVG++
Sbjct: 202 REEQAELRLTLTAVDGGSP-PRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE +GTV + A D D+G N+ ++N + PN F
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYN-ISPNSHFH 179
Query: 155 SDLRV--------EWVINRSVDQH 170
R E V++ +D+
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDRE 203
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKL 142
K+
Sbjct: 379 GKM 381
>gi|109076759|ref|XP_001088306.1| PREDICTED: cadherin-18 isoform 2 [Macaca mulatta]
gi|297294025|ref|XP_002804363.1| PREDICTED: cadherin-18 [Macaca mulatta]
gi|355691232|gb|EHH26417.1| Cadherin-14 [Macaca mulatta]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|4826671|ref|NP_004925.1| cadherin-18 isoform 1 preproprotein [Homo sapiens]
gi|3023435|sp|Q13634.1|CAD18_HUMAN RecName: Full=Cadherin-18; AltName: Full=Cadherin-14; Flags:
Precursor
gi|1389853|gb|AAB02933.1| cadherin-14 [Homo sapiens]
gi|119589257|gb|EAW68851.1| cadherin 18, type 2 [Homo sapiens]
gi|158260117|dbj|BAF82236.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|397494221|ref|XP_003817983.1| PREDICTED: cadherin-18 [Pan paniscus]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|114600921|ref|XP_526963.2| PREDICTED: cadherin-18 isoform 3 [Pan troglodytes]
gi|332821710|ref|XP_003310817.1| PREDICTED: cadherin-18 isoform 1 [Pan troglodytes]
gi|410331517|gb|JAA34705.1| cadherin 18, type 2 [Pan troglodytes]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|11036654|ref|NP_061756.1| protocadherin beta-13 precursor [Homo sapiens]
gi|13431381|sp|Q9Y5F0.1|PCDBD_HUMAN RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
gi|5457033|gb|AAD43753.1|AF152492_1 protocadherin beta 13 [Homo sapiens]
gi|14009455|gb|AAK51613.1|AF217745_1 protocadherin-beta13 [Homo sapiens]
gi|21620005|gb|AAH33068.1| Protocadherin beta 13 [Homo sapiens]
gi|30411001|gb|AAH51348.1| Protocadherin beta 13 [Homo sapiens]
gi|37181979|gb|AAQ88793.1| PCDHB13 [Homo sapiens]
gi|47939613|gb|AAH71934.1| Protocadherin beta 13 [Homo sapiens]
gi|119582374|gb|EAW61970.1| protocadherin beta 13 [Homo sapiens]
Length = 798
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L+ N T+++ D NDN P F + Y+L + E+ ++ VSA+D D G N++++++
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 147 LEPN 150
L P
Sbjct: 491 LPPQ 494
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
>gi|73768710|gb|AAI03495.1| PCDHB9 protein, partial [Homo sapiens]
Length = 796
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 195 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 254 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 294
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 493
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 324 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 379
>gi|350594180|ref|XP_003359779.2| PREDICTED: cadherin-18-like, partial [Sus scrofa]
Length = 716
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 141 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 200
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 201 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 239
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 27 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 83
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 84 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 137
>gi|332228097|ref|XP_003263228.1| PREDICTED: cadherin-18 isoform 1 [Nomascus leucogenys]
Length = 790
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|158259103|dbj|BAF85510.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L+ N T+++ D NDN P F + Y+L + E+ ++ VSA+D D G N++++++
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 147 LEPN 150
L P
Sbjct: 491 LPPQ 494
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
>gi|449268809|gb|EMC79647.1| Cadherin-20 [Columba livia]
Length = 798
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 220 GLIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQ 279
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E PV + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 280 MSVLESAPVSSTVGRVVAKDLDEGINAEMKYSLVDGDGLDVFDINTD 326
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 78 KHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
K +G+NP GP T I VED D P+F S Y + +PEDV +GT +Q+
Sbjct: 351 KVEGANPHLEMRFLNLGPFRDTTTVHISVEDV-DEPPVFEPSFYFVEVPEDVEIGTTIQM 409
Query: 129 VSASDADLGVNS 140
+SA D D+ NS
Sbjct: 410 ISAKDPDVTNNS 421
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 106 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 162
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 163 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 218
>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
Length = 798
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+++ D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
Length = 5086
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPT L + V L R LR+ V N + P T + + D+NDN+P
Sbjct: 2128 FSLNPTDGLLRIVDALDRELRSS----YVLNITARDRGEPPQATTTQLLVRILDENDNSP 2183
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F QYS S+ E+ +G +V VSA+D D G N ++ ++
Sbjct: 2184 VFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYS 2223
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL GT + V+D NDN P+F + Y SI E++P+GT+V +A+D D G+N+KL +N
Sbjct: 2377 PLTGTGIVRVEVQDINDNGPVFELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFN 2436
Query: 146 EL 147
L
Sbjct: 2437 LL 2438
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V D NDN P+F S YS IPE+ P G V V A DADLG NS+LS+
Sbjct: 1812 IEVSDTNDNPPMFEESVYSFDIPENAPRGYQVGQVVARDADLGQNSQLSY 1861
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF P + G L R + +E+ LKV + P+ TI ++DQNDN
Sbjct: 2865 KFKIEPLSGNITVAGHLDRE-QEDEYILKVVASDGAWRAETPI------TITIQDQNDNA 2917
Query: 105 PIFPVSQYSLSIPEDV-PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P F S YS S PE + PV V Q+++ LG NS +S++ +P+ +FS D +
Sbjct: 2918 PEFEHSFYSFSFPELLHPVALVGQIIATDRDKLGPNSVISYSLQQPSPMFSIDPATGEIF 2977
Query: 164 NRSVDQH 170
++ Q+
Sbjct: 2978 SKKAIQY 2984
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ T + I V D ND+ P+F S+YS + E P G+ V ++A+D D GVN+++ + L
Sbjct: 419 ITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSYVASITATDEDTGVNAQVHYEIL 478
Query: 148 EPNGL--FSSD 156
N L FS D
Sbjct: 479 SGNELKWFSID 489
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V D+NDN P F S ++ SIPE+ P T V + A D D+G N++LS+
Sbjct: 1071 IHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLLAVDRDIGRNAELSF 1120
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPV---SQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+ PG + G CN I + D NDN P F + ++ ++++PE+ VG + + D D G+
Sbjct: 872 TGPGIVYGKCNVNIAIIDLNDNAPSFALDRDAEPTIALPENAAVGQEIYLSRVRDRDAGI 931
Query: 139 NSK 141
NS+
Sbjct: 932 NSR 934
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
TI+V +N + P F Y + +PE+ P+G+ + V A+D D+G N L +
Sbjct: 3125 TIVVTGENHHTPEFTARSYQVIVPENEPIGSTILTVGATDEDVGPNGMLRY 3175
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 62 KRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+R +R E L VE P PL + + + D ND+ P+F + Y S+ E
Sbjct: 934 RRPVRAEPGSTLHVELMATDAGTP-PLSNRLSLLVHIADVNDHTPVFDHTSYETSLLETT 992
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
V T ++A+D DLG N ++S+ +E N
Sbjct: 993 KVNTRFFALAATDIDLGENGRISYEIIEGNA 1023
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P + N TI V D NDN P F YS+++P+ + G V A D D G N+ + ++
Sbjct: 2482 PRASSVNLTITVGDVNDNEPKFESGSYSIAVPDRIAAGEFVFGARAVDLDEGDNAVIHYS 2541
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T L G L R ++ + + P P + V D+ND P
Sbjct: 486 FSIDAATGLIATAGALDREIKDSVEL----SISARDGGPNPKFAYTQLKVTVLDENDEAP 541
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F Q ++S+ EDV ++V ++A+D D G N ++++
Sbjct: 542 QFGQQQLNVSLSEDVAPQSLVCTLTATDHDQGTNGSVAFS 581
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TII+ D NDN P+F S+Y + E+ PVGT V A+D D N+ + ++
Sbjct: 3222 PLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYS 3281
Query: 146 ELEPNG 151
L P+G
Sbjct: 3282 FL-PSG 3286
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQND 102
F NP T + TL L EE H++ + + G P + T T V D ND
Sbjct: 1872 FSLNPQTGML----TLTARLDYEEVQHYILIVQAQDSGQ---PSLSTTITVYCNVLDLND 1924
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N P+F YS + E+VP G V VSA D D G N + +
Sbjct: 1925 NAPLFDPMSYSSEVFENVPTGMEVVTVSAKDIDSGNNGLIEY 1966
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT + + + D+NDN P F +SL++ E+ +G+ V V++SD DLG N+ +++
Sbjct: 2800 LTGTASVLLHLLDKNDNPPKF-TRLFSLNVTENAEIGSFVIRVTSSDLDLGQNANATYS 2857
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
+IV D NDN P F + Y ++I E GT + V DAD G+N + + + N GL
Sbjct: 1195 VIVTDVNDNAPEFLRAPYHVTISEGASEGTHIMHVFTQDADEGLNGDVYYFLAKGNGAGL 1254
Query: 153 FSSDLRV-EWVINRSVDQHTN 172
FS D + + R +D+ +
Sbjct: 1255 FSLDSATGQLTLARKLDRESQ 1275
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L T TI+++D ND P+F VS +I E+V + TVV V A D D G N + +
Sbjct: 2051 LSSTVKVTILIKDVNDEVPVF-VSANETAIMENVAINTVVIAVKAVDYDEGRNGYIDY 2107
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P G+ I ++D NDN P+F + E+ P GT + +SA+D DL N
Sbjct: 3539 PQTGSATVRIDLDDVNDNGPVFAPEGLLGYVSENEPAGTSIMTLSATDPDLPRN 3592
>gi|345328635|ref|XP_003431287.1| PREDICTED: protocadherin alpha-13-like [Ornithorhynchus anatinus]
Length = 481
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E L+++ NP P+VG C + V D NDN P V+ SL + ED P GTV+
Sbjct: 314 ENKQLEIQVEATDNGNP-PMVGHCTVLVEVLDTNDNAPEIAVTSLSLPVREDAPPGTVIA 372
Query: 128 VVSASDADLGVNSKLSWNELEPNGLF 153
++S SD D G N +++ L+P G F
Sbjct: 373 LISVSDRDSGANGQVTCT-LDPPGPF 397
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP ++ LSI E + + A DAD+GVNS LS++ L PN LF+ D
Sbjct: 125 VKDINDNPPVFPENKKILSISESRLPDSRFPLDGAVDADIGVNSILSYS-LSPNELFTLD 183
Query: 157 LR 158
L+
Sbjct: 184 LQ 185
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
LK+ L T EH L + T G P L GT I+V D NDN P F S Y + +
Sbjct: 197 VLKKLLDREETPEHHLLL--TATDGGKP-ELTGTVQLVIVVLDVNDNAPKFGQSIYKVRL 253
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
E+ +G++V ++A+DAD G + +++ P
Sbjct: 254 VENAALGSLVIKLNATDADEGESGDMAYTFRRP 286
>gi|354500183|ref|XP_003512180.1| PREDICTED: protocadherin beta-14-like [Cricetulus griseus]
Length = 709
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL EE L++ T G +P P GT + I V D NDN P F S Y + +PED
Sbjct: 196 LDRALDHEEESELRLTLTALDGGSP-PRSGTTSILIKVLDINDNAPEFAQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELE 148
+P+G+ + +SA D DLG +S++ L+
Sbjct: 255 MPIGSSIIAISAKDLDLGNYGIISYSFLQ 283
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 46 FIANPTTRLYKNVGTL--KRALRTEEHWLKVE-NTKHKGSNPG-PLVGTCNT-TIIVEDQ 100
FI PT +KN TL ++AL E K E N ++ G P + T +T T+ V D
Sbjct: 391 FILKPT---FKNFFTLLSEKALDRES---KAEYNITITVTDLGTPRLTTQHTITVQVSDV 444
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
NDN P F + Y+L + E+ + +SA+D+D G N+ ++++ L
Sbjct: 445 NDNAPAFTETSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSLL 491
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V D ND++P+F + ++ +PE +G+ + + D D+G NS L + PN F
Sbjct: 123 VRDINDHSPMFLDKEITIKMPESATIGSTFLIENVQDLDIGSNS-LQEYSISPNSHFYVK 181
Query: 154 -----SSDLRVEWVINRSVDQH 170
+ + E V++R++D
Sbjct: 182 IHDGGNGKIYPELVLDRALDHE 203
>gi|327288704|ref|XP_003229066.1| PREDICTED: cadherin-24-like [Anolis carolinensis]
Length = 795
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + T T++ +L V K G + G L G+ T+ + D NDN P
Sbjct: 205 FSVDPQTGVIRT-ATPNMDRETQQEFLVVVQAKDMGGHAGGLSGSTTVTVTLSDVNDNPP 263
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
FP S Y S+ E P G+VV + A D D G N+ L+++ L+
Sbjct: 264 RFPQSSYQFSVVETAPPGSVVGRLRAHDPDEGENALLAYSILD 306
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+F Y ++PE VGT V V+A DAD G +++L
Sbjct: 135 PLEPPSEFIIKVQDINDNPPVFLHGPYHATVPEMSNVGTSVIQVTAQDADDPLYGNSARL 194
Query: 143 SWNELEPNGLFSSD 156
+ LE FS D
Sbjct: 195 VYTVLEGLPFFSVD 208
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP I VED D P F S+Y L++ E+ P GT+V V+A D D
Sbjct: 360 GPFKDIATVRITVEDA-DEPPSFSRSEYHLAVYENSPPGTLVGKVAAVDLD 409
>gi|431892570|gb|ELK03003.1| Protocadherin alpha-4 [Pteropus alecto]
Length = 786
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G C + VED NDN PI SL I ED P+GTV+ ++S SD D GVN +++
Sbjct: 329 PLSGHCTVMVEVEDTNDNVPIMEFKSLSLPIREDAPLGTVIALISVSDRDSGVNRQVTCT 388
Query: 146 EL 147
L
Sbjct: 389 LL 390
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E + + T G P L GT +IV D NDN P F + Y++ +PE+
Sbjct: 196 LRKPLDREESSEIFLMLTATDGGKP-ELTGTIQLLVIVLDANDNTPTFDRTLYTVKLPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT+V ++ASD D G N + ++
Sbjct: 255 VPNGTLVIKLNASDLDEGSNGDIIYS 280
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP SQ +L + E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFPGSQKNLFMAESRPLDSWFPLEGASDADVGANALLTYR-LSPNEYFS 179
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G P L T + + V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TAQDGGLPS-LSATASVFVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
>gi|395736270|ref|XP_002816041.2| PREDICTED: protocadherin beta-14 isoform 2 [Pongo abelii]
Length = 798
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 53 RLYKNVGTLKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
R+Y + L RAL E E L++ T G +P P GT I V D NDN P FP S
Sbjct: 189 RIYPEL-VLDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSL 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
Y + +PED P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 247 YEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN PIF + Y+L + E+ + +SA+D D G N++++++ L
Sbjct: 436 NITVLVSDVNDNAPIFTQTSYTLFVRENNSPALHIGSISATDRDSGTNAQVTYSLL 491
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF- 153
+ V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFY 179
Query: 154 -----SSDLRV--EWVINRSVD 168
SSD R+ E V++R++D
Sbjct: 180 IKIPDSSDRRIYPELVLDRALD 201
>gi|344241468|gb|EGV97571.1| Cadherin-18 [Cricetulus griseus]
Length = 691
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 57 NVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
++G ++ AL EH+ V K G L G+ I + D NDN P FP
Sbjct: 114 DMGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKH 173
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
Y L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 174 YQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 214
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 57 NVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
N GT+K + R E W + T + NPG L+ + I V D NDN P +Y
Sbjct: 337 NTGTIKTSKVLDREETPWYNITVTASENDNPG-LLSHVSVGIRVLDVNDNPPEL-AREYD 394
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+ + E+ G V+ ++A+D D
Sbjct: 395 IVVCENSKPGQVIHTITATDKD 416
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
+L R R +H++ V GS P L GT IIV+D NDN P F + Y +IPED
Sbjct: 2321 SLDREAR--DHFVLVVTAADAGS-PA-LTGTGTINIIVDDINDNVPTFASNMYFTAIPED 2376
Query: 120 VPVGTVVQVVSASDADLGVNSKLS 143
P GT V +V+ASDAD N+ +S
Sbjct: 2377 APTGTDVLLVNASDADAATNAVIS 2400
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L RAL E + + + + G T + D NDN P
Sbjct: 1889 FFLNPVTGVFN----LTRALDYERQQYYILTVRAE--DGGGQFTTIRAYFNILDINDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F +S YS S+ E++P+G+ V V + +DAD GVNS+LS++
Sbjct: 1943 VFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYS 1982
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL TC +I + D+NDN P FP S + + E++ +G +V V+A+D+D GVN+ L +
Sbjct: 1294 PLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHY 1352
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+VP G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 VFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ +
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRY 1137
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E + L V+ T S P +C I + D ND P+F +S YS+++
Sbjct: 2212 TVAKSLDRETIPAYILTVQATDRGSS---PRTDSCTVAITLLDMNDFVPVFELSPYSVNV 2268
Query: 117 PEDVPV--GTVVQVVSASDADLGVNSKLSWNEL---EPNGL---FSSDLRVEWVINRSVD 168
PE++ T++QVV A D D G NS+LS+ L E N S +LRV ++R
Sbjct: 2269 PENLGALPRTILQVV-ARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRVTQSLDREAR 2327
Query: 169 QH 170
H
Sbjct: 2328 DH 2329
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P+GT V V+A D D +N +LS+
Sbjct: 1434 PLGTSVISVTAHDPDADINGQLSY 1457
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++V D NDNNP+F + Y + I E+ GT + VSA+D D G N ++ +
Sbjct: 2133 PLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYG 2192
Query: 146 ELEPNGLFSSDLRVEWV-----INRSVDQHT 171
+ G + R++ V + +S+D+ T
Sbjct: 2193 IV--GGNTHQEFRIDSVTGAITVAKSLDRET 2221
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I + D ND+ P F YS IPED G++V + A+D D GVN ++S+ E + +G+
Sbjct: 1829 ITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGV 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F ++ ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3176 GYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAY 3231
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P+F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPMF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPAG 2094
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN PIF +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPIF-ISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFTVDRYSGDLRV 1586
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
K KG NP PL I V ++N + P F S S +IPE +G+VV+ VSA D D
Sbjct: 3062 KDKG-NP-PLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSVVRTVSARDRDTA 3119
Query: 138 VNSKLSWN 145
+N +S+N
Sbjct: 3120 MNGLISYN 3127
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P T + + D NDN+P+F QY I E+ P G+ V VSA+D D+G N + ++
Sbjct: 668 PQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYS 727
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2855 STDVTIFVTDINDNTPRFSRPSYYLDCPELTELGSRVTQVSATDPDEGSNGQVFYFIKSK 2914
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2915 SEYFRINATTGEIFNKQVLKYQN 2937
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P V + V D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAE 626
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2458 DVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYS 2504
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ G+ G + I V D ND P+F ++ Y + I E
Sbjct: 3359 GLLDRE-KEERVSLKVL-AKNFGNIRGADIDEVTVNITVLDANDP-PVFSLNTYRVQISE 3415
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3416 GVPIGTHVTFVSAFDSD 3432
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-----NELE 148
T+ V D NDN P+F Y +++ E PV + V A D D G N ++++ N E
Sbjct: 983 TVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGE 1042
Query: 149 PNGLF 153
G+F
Sbjct: 1043 AFGIF 1047
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V D DN P+F + YS + E+V +G V VSA+ DL N + G+F
Sbjct: 780 TVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMF 839
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 840 AMNPVTGQLTTASVIDR 856
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI D NDN P F ++Y + ++V VGT +++V + D D
Sbjct: 2954 TASDRGNPS-LLSETTVTINTVDSNDNPPQFLKNKYFTPVTKNVKVGTKLIKVTAVDDKD 3012
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS++ + N G F D W+
Sbjct: 3013 FGLNSEVEYFVSNGNHLGKFKLDNDTGWI 3041
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSN 167
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 95 IIVEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
I V D+NDN P F SQ +S + E+ P+G V V+ SD D+G+N+
Sbjct: 2761 ISVLDENDNAPRF--SQIFSAYVSENSPLGYTVTRVTTSDEDIGINA 2805
>gi|281347880|gb|EFB23464.1| hypothetical protein PANDA_011223 [Ailuropoda melanoleuca]
Length = 577
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 2 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 61
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 62 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 100
>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 3386
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1896 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1954
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 1955 DVPAGTLLLQLQAHDPDAGANGRVTY 1980
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2439 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2498
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2499 ISYHLASPADGFSVD 2513
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G KL ++ LE
Sbjct: 2781 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGKLRYSLLE 2835
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 956 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 1015
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 1016 RVTFTLLAGGG 1026
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASD D G + + + + +P GLF D
Sbjct: 2684 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDVDPGPHGLVRFTVSSGDPAGLFELD 2741
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + + ++D NDN P
Sbjct: 609 FSIDPTSGIITTAASLDYELEPQPQLTVVAT---DGGLP-PLASSATVNVALQDVNDNEP 664
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G+ LS++
Sbjct: 665 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGLFGLLSYS 704
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T + + TL+ R E+ + + +P P + + VED+N
Sbjct: 1778 SSGSFSLDPDTGV---LTTLRALDREEQEEINLTVYAQDRGSP-PQLTHATIRVAVEDEN 1833
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1834 DHAPTFGSTHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1890
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V V A D D G + +LS+
Sbjct: 751 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRVRAHDPDQGSHGRLSY 810
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 811 HILAGNSPPLFALDEQSGLLTVAWPLARRAN 841
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L + L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1681 RLHSSTGALSVVQPLDREQRAEHVLIVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1737
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+YS+ + E+ GT + + A+D DLG N ++++ + +G FS D
Sbjct: 1738 QQQEYSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVS-SGSFSLD 1785
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2345 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2400
Query: 147 LEPNG 151
L P+G
Sbjct: 2401 LSPSG 2405
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 2022 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 2081
Query: 137 GVNSKL 142
G N+ +
Sbjct: 2082 GANASI 2087
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2560 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2598
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1572 PALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRATRVSARVFVTDENDNA 1631
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1632 PVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1670
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 189 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 248
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 249 CYPLEPARDADAG 261
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 299 GELDRENRS--HYMLQLEAYDGGSPPRRAQTLLDVTLL--DINDHAPAFNQSRYHAVVSE 354
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 355 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 396
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1154 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTNVG 1213
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1214 RVFATDRDSGPNGRLTYS 1231
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 876 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 928
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS GT + ++ D NDN+P
Sbjct: 1242 FRIHPQTGEVTTLQTLDREQQSTYQLLV--QVQDGGSPSHSTTGTVHVAVL--DLNDNSP 1297
Query: 106 IF------PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1298 TFLQASGAAAGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1353
>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
Length = 4959
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPT L + V L R LR+ V N + P T + + D+NDN+P
Sbjct: 1999 FSLNPTDGLLRIVDALDRELRSS----YVLNITARDRGEPPQATTTQLLVRILDENDNSP 2054
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F QYS S+ E+ +G +V VSA+D D G N ++ ++
Sbjct: 2055 VFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYS 2094
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL GT + V+D NDN P+F + Y SI E++P+GT+V +A+D D G+N+KL +N
Sbjct: 2248 PLTGTGIVRVEVQDINDNGPVFELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFN 2307
Query: 146 EL 147
L
Sbjct: 2308 LL 2309
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V D NDN P+F S YS IPE+ P G V V A DADLG NS+LS+
Sbjct: 1683 IEVSDTNDNPPMFEESVYSFDIPENAPRGYQVGQVVARDADLGQNSQLSY 1732
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ G +P P +G + + D NDN PIF S Y++S+ E GT V V ASD DL
Sbjct: 256 SARDGGSP-PRLGFLQVNVTILDVNDNPPIFDHSDYNVSLNETAVAGTPVVTVMASDNDL 314
Query: 137 GVNSKLSWNELEPNGLFSSD 156
G NSKL++ E F+ D
Sbjct: 315 GDNSKLTYYLAETEHQFTVD 334
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF P + G L R + +E+ LKV + P+ TI ++DQNDN
Sbjct: 2736 KFKIEPLSGNITVAGHLDRE-QEDEYILKVVASDGAWRAETPI------TITIQDQNDNA 2788
Query: 105 PIFPVSQYSLSIPEDV-PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P F S YS S PE + PV V Q+++ LG NS +S++ +P+ +FS D +
Sbjct: 2789 PEFEHSFYSFSFPELLHPVALVGQIIATDRDKLGPNSVISYSLQQPSPMFSIDPATGEIF 2848
Query: 164 NRSVDQH 170
++ Q+
Sbjct: 2849 SKKAIQY 2855
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
TL R L E H L VE + GPL +I+V D+NDN P F S +S+
Sbjct: 1108 TLARKLDRESQDVHHLIVE--ARDAALKGPLSSNATISIVVLDENDNAPEFTQSSSEVSV 1165
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
E P GT + ASD+D GVNS++ ++
Sbjct: 1166 LETSPSGTELMRFRASDSDQGVNSQVVFS 1194
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+ T + I V D ND+ P+F S+YS + E P G+ V ++A+D D GVN+++ + L
Sbjct: 491 ITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSYVASITATDEDTGVNAQVHYEIL 550
Query: 148 EPNGL--FSSD 156
N L FS D
Sbjct: 551 SGNELKWFSID 561
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V D+NDN P F S ++ SIPE+ P T V + A D D+G N++LS+
Sbjct: 914 IHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLLAVDRDIGRNAELSF 963
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 61 LKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R +R E L VE P PL + + + D ND+ P+F + Y S+ E
Sbjct: 776 LQRPVRAEPGSTLHVELMATDAGTP-PLSNRLSLLVHIADVNDHTPVFDHTSYETSLLET 834
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
V T ++A+D DLG N ++S+ +E N
Sbjct: 835 TKVNTRFFALAATDIDLGENGRISYEIIEGNA 866
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
TI+V +N + P F Y + +PE+ P+G+ + V A+D D+G N L +
Sbjct: 2996 TIVVTGENHHTPEFTARSYQVIVPENEPIGSTILTVGATDEDVGPNGMLRY 3046
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P + N TI V D NDN P F YS+++P+ + G V A D D G N+ + ++
Sbjct: 2353 PRASSVNLTITVGDVNDNEPKFESGSYSIAVPDRIAAGEFVFGARAVDLDEGDNAVIHYS 2412
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T L G L R ++ + + P P + V D+ND P
Sbjct: 558 FSIDAATGLIATAGALDREIKDSVEL----SISARDGGPNPKFAYTQLKVTVLDENDEAP 613
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F Q ++S+ EDV ++V ++A+D D G N ++++
Sbjct: 614 QFGQQQLNVSLSEDVAPQSLVCTLTATDHDQGTNGSVAFS 653
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TII+ D NDN P+F S+Y + E+ PVGT V A+D D N+ + ++
Sbjct: 3093 PLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYS 3152
Query: 146 ELEPNG 151
L P+G
Sbjct: 3153 FL-PSG 3157
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQND 102
F NP T + TL L EE H++ + + G P + T T V D ND
Sbjct: 1743 FSLNPQTGML----TLTARLDYEEVQHYILIVQAQDSGQ---PSLSTTITVYCNVLDLND 1795
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N P+F YS + E+VP G V VSA D D G N + +
Sbjct: 1796 NAPLFDPMSYSSEVFENVPTGMEVVTVSAKDIDSGNNGLIEY 1837
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT + + + D+NDN P F +SL++ E+ +G+ V V++SD DLG N+ +++
Sbjct: 2671 LTGTASVLLHLLDKNDNPPKF-TRLFSLNVTENAEIGSFVIRVTSSDLDLGQNANATYS 2728
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
+IV D NDN P F + Y ++I E GT + V DAD G+N + + + N GL
Sbjct: 1038 VIVTDVNDNAPEFLRAPYHVTISEGASDGTHIMHVFTQDADEGLNGDVYYFLAKGNGAGL 1097
Query: 153 FSSDLRV-EWVINRSVDQHTN 172
FS D + + R +D+ +
Sbjct: 1098 FSLDSATGQLTLARKLDRESQ 1118
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L T TI+++D ND P+F VS +I E+V + TVV V A D D G N + +
Sbjct: 1922 LSSTVKVTILIKDVNDEVPVF-VSANETAIMENVAINTVVIAVKAVDYDEGRNGYIDY 1978
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P G+ I ++D NDN P+F + E+ P GT + +SA+D DL N
Sbjct: 3410 PQTGSATVRIDLDDVNDNGPVFAPEGLLGYVSENEPAGTSIMTLSATDPDLPRN 3463
>gi|432094189|gb|ELK25864.1| Cadherin-18 [Myotis davidii]
Length = 790
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 313
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|348577159|ref|XP_003474352.1| PREDICTED: cadherin-24 [Cavia porcellus]
Length = 781
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAEPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLQAQDPDLGDNALMAYSILDGEG 303
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|383851146|ref|XP_003701100.1| PREDICTED: cadherin-87A-like [Megachile rotundata]
Length = 1889
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+N G V I + D N+N P+FP Y+ SIPE P+GT+V+ V+A+DAD G+N++
Sbjct: 693 ANDGIFVDPTTVNITIRDVNNNAPVFPHDLYTASIPEISPIGTIVEEVTATDADTGINAE 752
Query: 142 LSW 144
L +
Sbjct: 753 LIY 755
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N TI + D+NDN PIF + Y + + V V+ASD D+G N L +
Sbjct: 1478 GHANVTITILDENDNPPIFERNDYYAGVNSMANINDFVTKVTASDLDVGDNGTLHY 1533
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT I VE+ ND P F + ED P+GTV + A+D D L++
Sbjct: 802 LTGTTTLMINVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPDSASLEALNFAI 861
Query: 147 LEP 149
EP
Sbjct: 862 SEP 864
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLS 143
V T T+ ++D ND P F +Y++ IPE+V GT ++ ++ D D+G+NS S
Sbjct: 365 VSTAEATVTIKDVNDEPPTFNHREYNIEIPENVMNGTPLRNLDMTVRDPDIGLNSVFS 422
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEH-----WLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F+ PTT + K L + L EE+ + +E+ G P +VG + +IV D+
Sbjct: 98 FVVEPTTGVIK----LAKPLNREEYDTIRFRITLEDEVPAGQQPN-IVG-VDAFVIVLDE 151
Query: 101 NDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADL 136
NDN P F Y ED+PVG T++ + D D+
Sbjct: 152 NDNPPRFLGVPYEAVAVEDLPVGSTILPGIRVMDPDM 188
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
L + TI V + ND NP F Y+ S+ E+ P GT V V A+D D G
Sbjct: 1029 LSASAKVTITVINVNDQNPKFEKELYNASVEENSPPGTHVITVKATDGDEG 1079
>gi|410948517|ref|XP_003980981.1| PREDICTED: protocadherin gamma-A10 [Felis catus]
Length = 854
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 61 LKRALRTEEHWLK-VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
LK AL EE L + T G +P L GT ++IV D NDN P+F + +Y +S+ E+
Sbjct: 196 LKHALDREEEALHHLVLTASDGGDP-LLSGTVLISVIVFDTNDNAPVFTLPEYRVSVLEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 255 LPVGTQLLTVTATDRDEGANGEVTYS 280
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 40 TFSIAKFIANPTTR--LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
T+S KF+ + + L KN G +K + + + + + G + I V
Sbjct: 278 TYSFRKFVPDKLLKFQLNKNTGEIKLSENLDYEETDFYELEIQAEDGGAYLAMAKVLITV 337
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
ED NDNNP ++ + ED P GT++ +++ D D G N +++ +
Sbjct: 338 EDVNDNNPEVTITSLFSPLMEDSPPGTIIALLNVHDPDSGQNGQVTCS 385
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP PL+ + T+ V D NDN P F Y IPE+ P G + V+A D D
Sbjct: 423 TATDGGNP-PLLTETHFTVQVADINDNPPTFSHISYFTYIPENNPRGASILSVTALDPDS 481
Query: 137 GVNSKLSWNELE 148
N+++ ++ E
Sbjct: 482 KENAQVIYSLAE 493
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 64 ALRT----EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSI- 116
ALRT + H L+++ +P PL + +I V DQNDN P ++P S
Sbjct: 516 ALRTFDYEQFHDLQIQVIATDSGDP-PLSSNVSVSIFVLDQNDNAPEILYPTLPTDTSTG 574
Query: 117 ----PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDL 157
P G +V V A D D G N++LS+ L+ + GLF+ L
Sbjct: 575 MELAPRSSESGYLVTKVVAVDKDSGQNARLSYRLLKASEPGLFAVGL 621
>gi|402894358|ref|XP_003910330.1| PREDICTED: protocadherin-16 [Papio anubis]
Length = 3345
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1855 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1913
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N ++++
Sbjct: 1914 DVPAGTLLLQLQAHDPDAGANGRVTY 1939
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2398 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2457
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2458 ISYHLASPADGFSVD 2472
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2643 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2700
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G KL ++ LE
Sbjct: 2740 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGKLRYSLLE 2794
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 915 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 974
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 975 RVTFTLLAGGG 985
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T + + TL+ R E+ + + +P P + + VED+N
Sbjct: 1737 SSGSFSLDPDTGV---LTTLRALDREEQEEINLTVYAQDRGSP-PQLTHATIRVAVEDEN 1792
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1793 DHAPTFGSTHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1849
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V V A D D G + +LS+
Sbjct: 710 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRVRAHDPDQGSHGRLSY 769
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 770 HILAGNSPPLFALDEQSGLLTVAWPLARRAN 800
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + ++D NDN P F + Y+ S+PE GT V+A+DAD G+ LS++
Sbjct: 604 PLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGLFGLLSYS 663
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L + L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1640 RLHSSTGALSVVQPLDREQRAEHILTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1696
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+YS+ + E+ GT + + A+D DLG N ++++ + +G FS D
Sbjct: 1697 QQQEYSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVS-SGSFSLD 1744
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TIIV D ND+ P FP S L +P P + + + A D D
Sbjct: 1981 GAAAGPLSTTVSVTIIVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 2040
Query: 137 GVNSKL 142
G N+ +
Sbjct: 2041 GANASI 2046
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2304 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2359
Query: 147 LEPNG 151
L P+G
Sbjct: 2360 LSPSG 2364
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2519 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2557
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1531 PALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRATRVSARVFVTDENDNA 1590
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1591 PVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1629
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 148 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 207
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 208 CYPLEPARDADAG 220
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 258 GELDRENRS--HYMLQLEAYDGGSPPRRAQTLLDVTLL--DINDHAPAFNQSRYHAVVSE 313
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 314 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 355
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1113 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1172
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1173 RVFATDRDSGPNGRLTYS 1190
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 835 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 887
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS GT + ++ D NDN+P
Sbjct: 1201 FRIHPQTGEVTTLQTLDREQQSTYQLLV--QVQDGGSPSHSTTGTVHVAVL--DLNDNSP 1256
Query: 106 IF------PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1257 TFLQASGAAAGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1312
>gi|351694356|gb|EHA97274.1| Cadherin-6 [Heterocephalus glaber]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G +K AL E + V K G G L GT I + D ND
Sbjct: 204 GQPYFSVESETGIIKTALHNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P FP S Y E P GT + + ASDAD+G N+K+ ++ + GL
Sbjct: 264 NPPRFPQSTYQFKTAESSPPGTPIGRIKASDADVGENAKIVYSITDGEGL 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
P+ I + D NDN PIF Y+ ++PE VGT V V+A+DAD G ++K+
Sbjct: 138 PIEPESEFVIKIHDINDNEPIFTEEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKV 197
Query: 143 SWNELEPNGLFS 154
++ L+ FS
Sbjct: 198 VYSILQGQPYFS 209
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E+ KV K + SNP GP + I+VED D P+F
Sbjct: 330 TVKKLLDFEKK--KVYTLKVEASNPRVEAQFQYLGPFKDSAMVRIVVEDV-DEPPVFSKV 386
Query: 111 QYSLSIPEDVPVGTVVQVVSASDAD 135
Y L I ED + T + V+A D D
Sbjct: 387 AYILQIREDAQINTTIGSVTAQDPD 411
>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
Length = 3188
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1698 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1756
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1757 DAPAGTLLLQLQAHDPDAGANGRVTY 1782
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN+P F + Y + + E P G+ + VSA+D D G N
Sbjct: 2241 AHDGPHEGRANLTVFVEDVNDNSPAFSQTLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2300
Query: 142 LSWNELEPNGLFSSD 156
+S++ FS D
Sbjct: 2301 VSYHLASSAEGFSID 2315
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2471 PRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2530
Query: 144 WNELEPNGLF-----SSDLRV 159
+ +P GLF S DLR+
Sbjct: 2531 LSSGDPLGLFELDESSGDLRL 2551
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + G +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1595 TLRALDREEQEEINLTVYARDGGSP-PLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEG 1653
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D+G N +L + L +P+G F DL
Sbjct: 1654 QDPQTLT-TLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1692
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS
Sbjct: 866 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPSSTAPGTLIYTLRALDPDSGVNS 925
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 926 RVTFTLLAGGG 936
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2583 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2637
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T V +L R R E + L V + H GS P T T+ V D ND P
Sbjct: 1482 FRLHPSTGALSVVRSLDREQRAE-YVLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAP 1537
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1538 AFQQQEYSVLLRENSPPGTSLLTLQATDPDLGANGQVTY 1576
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + L L + + V G P PL + +++++D NDN P
Sbjct: 519 FSIDPTSGIVTTAALLDYELEPQPQLIVVAT---DGGLP-PLSSSATVSVVLQDVNDNEP 574
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 575 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 614
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2147 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2202
Query: 147 LEPNG 151
L P+G
Sbjct: 2203 LSPSG 2207
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNS 140
GPL T TI V D ND+ P FP S L +P PV + + + A D D G N+
Sbjct: 1828 GPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPILPLATLRAEDRDAGANA 1887
Query: 141 KL 142
+
Sbjct: 1888 SI 1889
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 661 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY 720
Query: 145 NELEPNG--LFSSD-----LRVEWVINR 165
+ L N LF+ D L V W + R
Sbjct: 721 HILAGNSPPLFALDEHSGLLTVAWPLAR 748
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2362 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2400
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G T I + +QND++P L++ E+ P GT V
Sbjct: 1064 ELYTLKVMAVSGSKAELGQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1123
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G+N +L+++
Sbjct: 1124 RVFATDRDSGINGRLTYS 1141
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y ++ E
Sbjct: 209 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAAVSE 264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 265 SLSPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 306
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1152 FRIHPQTGEVTTLQTLDRE-RQNSYQLLVQ-VQDAGSPPRSTTGTVH--IAVLDLNDNSP 1207
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1208 TFLQASGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFS 1263
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1424 VFVTDENDNAPVF-ASPSRVRLPEDHPPGPTALHVVARDPDLGEAARVSY 1472
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ L IPE +GT + A DAD G
Sbjct: 120 PDGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAG 171
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 786 PVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 838
>gi|327270367|ref|XP_003219961.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 818
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 60 TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L+++L R EH L++ T G P P GT + I V D NDN PIF Y +SI E
Sbjct: 195 VLQKSLDRESEHSLQLILTALDGGEP-PKTGTAHIWINVTDANDNPPIFKEEVYKVSIVE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
VP+G+++ VSA D D GVN+++ ++
Sbjct: 254 SVPIGSLLLQVSALDKDDGVNAQIEYH 280
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL ++ + D NDN+P F Y++ +PE+ P G + + ASD DL N+ ++++
Sbjct: 431 PLSSNKTISLQISDINDNSPTFEEKAYNIFVPENNPSGASIFTIKASDPDLDRNAHVTYS 490
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G LV C + ++D NDN P ++ S IPE GTV+ +++ D D G N ++
Sbjct: 325 GGLVAHCKIDVTIQDVNDNVPEMNIASLSNPIPEYSVPGTVIALINVKDRDSGENGEI 382
>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
Length = 3296
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1806 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1864
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1865 DAPAGTLLLQLQAHDPDAGANGRVTY 1890
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN+P F + Y + + E P G+ + VSA+D D G N
Sbjct: 2349 AHDGPHEGQANLTVFVEDVNDNSPAFSQTLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2408
Query: 142 LSWNELEPNGLFSSD 156
+S++ FS D
Sbjct: 2409 VSYHLASSAEGFSID 2423
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2579 PRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2638
Query: 144 WNELEPNGLF-----SSDLRV 159
+ +P GLF S DLR+
Sbjct: 2639 LSSGDPLGLFELDESSGDLRL 2659
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + G +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1703 TLRALDREEQEEINLTVYARDGGSP-PLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1761
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D+G N +L + L +P+G F DL
Sbjct: 1762 QDPQTLT-TLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1800
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS
Sbjct: 866 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPSSTAPGTLIYTLRALDPDSGVNS 925
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 926 RVTFTLLAGGG 936
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2691 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2745
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T V +L R R E + L V + H GS P T T+ V D ND P
Sbjct: 1590 FRLHPSTGALSVVRSLDREQRAE-YVLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAP 1645
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1646 AFQQQEYSVLLRENSPPGTSLLTLQATDPDLGANGQVTY 1684
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + L L + + V G P PL + +++++D NDN P
Sbjct: 519 FSIDPTSGIVTTAALLDYELEPQPQLIVVAT---DGGLP-PLSSSATVSVVLQDVNDNEP 574
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 575 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 614
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2255 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2310
Query: 147 LEPNG 151
L P+G
Sbjct: 2311 LSPSG 2315
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNS 140
GPL T TI V D ND+ P FP S L +P PV + + + A D D G N+
Sbjct: 1936 GPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPILPLATLRAEDRDTGANA 1995
Query: 141 KL 142
+
Sbjct: 1996 SI 1997
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 661 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY 720
Query: 145 NELEPNG--LFSSD-----LRVEWVINR 165
+ L N LF+ D L V W + R
Sbjct: 721 HILAGNSPPLFALDEHSGLLTVAWPLAR 748
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1482 PALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNA 1541
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1542 PVF-ASPSRVRLPEDHPPGPTALHVVARDPDLGEAARVSY 1580
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G T I + +QND++P L++ E+ P GT V
Sbjct: 1064 ELYTLKVMAVSGSKAELGQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1123
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G+N +L+++
Sbjct: 1124 RVFATDRDSGINGRLTYS 1141
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2470 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2508
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y ++ E
Sbjct: 209 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAAVSE 264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 265 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 306
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1152 FRIHPQTGEVTTLQTLDRE-RQNSYQLLVQ-VQDAGSPPRSTTGTVH--IAVLDLNDNSP 1207
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1208 TFLQASGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFS 1263
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ L IPE +GT + A DAD G
Sbjct: 120 PDGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAG 171
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 786 PVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 838
>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
Length = 3296
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1806 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1864
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1865 DAPAGTLLLQLQAHDPDAGANGRVTY 1890
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN+P F + Y + + E P G+ + VSA+D D G N
Sbjct: 2349 AHDGPHEGRANLTVFVEDVNDNSPAFSQTLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2408
Query: 142 LSWNELEPNGLFSSD 156
+S++ FS D
Sbjct: 2409 VSYHLASSAEGFSID 2423
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2579 PRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2638
Query: 144 WNELEPNGLF-----SSDLRV 159
+ +P GLF S DLR+
Sbjct: 2639 LSSGDPLGLFELDESSGDLRL 2659
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + G +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1703 TLRALDREEQEEINLTVYARDGGSP-PLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1761
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D+G N +L + L +P+G F DL
Sbjct: 1762 QDPQTLT-TLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1800
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS
Sbjct: 866 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPSSTAPGTLIYTLRALDPDSGVNS 925
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 926 RVTFTLLAGGG 936
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2691 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2745
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T V +L R R E + L V + H GS P T T+ V D ND P
Sbjct: 1590 FRLHPSTGALSVVRSLDREQRAE-YVLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAP 1645
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1646 AFQQQEYSVLLRENSPPGTSLLTLQATDPDLGANGQVTY 1684
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + L L + + V G P PL + +++++D NDN P
Sbjct: 519 FSIDPTSGIVTTAALLDYELEPQPQLIVVAT---DGGLP-PLSSSATVSVVLQDVNDNEP 574
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 575 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 614
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2255 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2310
Query: 147 LEPNG 151
L P+G
Sbjct: 2311 LSPSG 2315
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNS 140
GPL T TI V D ND+ P FP S L +P PV + + + A D D G N+
Sbjct: 1936 GPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPVLPLATLRAEDRDAGANA 1995
Query: 141 KL 142
+
Sbjct: 1996 SI 1997
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 661 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY 720
Query: 145 NELEPNG--LFSSD-----LRVEWVINR 165
+ L N LF+ D L V W + R
Sbjct: 721 HILAGNSPPLFALDEHSGLLTVAWPLAR 748
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN
Sbjct: 1482 PALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNA 1541
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V A D DLG +++S+
Sbjct: 1542 PVF-ASPSRVRLPEDHPPGPTALHVVARDPDLGEAARVSY 1580
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2470 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2508
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G T I + +QND++P L++ E+ P GT V
Sbjct: 1064 ELYTLKVMAVSGSKAELGQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1123
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G+N +L+++
Sbjct: 1124 RVFATDRDSGINGRLTYS 1141
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y ++ E
Sbjct: 209 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAAVSE 264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 265 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 306
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1152 FRIHPQTGEVTTLQTLDRE-RQNSYQLLVQ-VQDAGSPPRSTTGTVH--IAVLDLNDNSP 1207
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1208 TFLQASGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFS 1263
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ L IPE +GT + A DAD G
Sbjct: 120 PDGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAG 171
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 786 PVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 838
>gi|10433211|dbj|BAB13935.1| unnamed protein product [Homo sapiens]
Length = 744
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L+ N T+++ D NDN P F + Y+L + E+ ++ VSA+D D G N++++++
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 147 LEP 149
L P
Sbjct: 491 LPP 493
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
>gi|431892546|gb|ELK02979.1| Protocadherin gamma-B5 [Pteropus alecto]
Length = 670
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P PL GT + V D NDN PIF Y +S+ E+VP+GT V VSA+D D
Sbjct: 214 TALDGGDP-PLSGTTELRVQVTDANDNRPIFNQDIYRVSLRENVPLGTTVLQVSATDLDE 272
Query: 137 GVNSKLSWN 145
GVNS+++++
Sbjct: 273 GVNSEITYS 281
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ + D NDN P+F S Y + +PE+ P G + VSASD+DLG N +S+
Sbjct: 428 PLSSSITITLHITDVNDNAPVFQQSAYLVHVPENNPPGASIAQVSASDSDLGPNGHVSYS 487
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 488 IVASDLEPRALSS 500
>gi|18087797|ref|NP_444373.1| protocadherin beta 18 precursor [Mus musculus]
gi|13876296|gb|AAK26068.1| protocadherin beta 18 [Mus musculus]
gi|148678206|gb|EDL10153.1| protocadherin beta 18 [Mus musculus]
Length = 792
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P P GT I+V D NDN P FP Y + PE+ P+G VV V+ D D
Sbjct: 213 TALDGGSP-PRSGTATIHILVLDINDNAPQFPQELYEIQAPENSPIGLVVIKVTGEDVDS 271
Query: 137 GVNSKLSWNELEPNGLFSSDLRVEWVIN 164
GVN+++S++ + S D+R + IN
Sbjct: 272 GVNAEISYSFFDA----SEDIRATFQIN 295
>gi|73953950|ref|XP_546374.2| PREDICTED: cadherin-18 isoform 1 [Canis lupus familiaris]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 313
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|344280988|ref|XP_003412263.1| PREDICTED: protocadherin-16 [Loxodonta africana]
Length = 2693
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 1746 AHDGPHEGRANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGL 1805
Query: 142 LSWNELEPNGLFSSD 156
+S++ P+ FS D
Sbjct: 1806 ISYHLASPDEGFSVD 1820
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1203 GTMRSLDREVEPVFQLKIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1261
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1262 DAPAGTLLLQLQAHDPDEGPNGRVTY 1287
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+IV D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 1976 PRSSAVPVTVIVLDVNDNPPVFTRASYHMAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2035
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2036 LSSGDPLGLFELD 2048
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI VED ND++P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2088 TIEVEDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDRDAGAFGRLRYSLLE 2142
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L +PED +G+ + V+ +D D G + W
Sbjct: 1652 LVGSATLTVMVIDTNDNRPTIP-QPWELRVPEDALLGSEIAQVTGNDVDSG---PVLWYV 1707
Query: 147 LEPNG 151
L P+G
Sbjct: 1708 LNPSG 1712
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN P FP + ++ +P G+ + + A D D GVNS
Sbjct: 263 GSGVPPAFAVARVRVLLDDVNDNTPAFPAPEDTVLLPPSTAPGSPIYTLRALDPDSGVNS 322
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 323 RVTFTLLAGGG 333
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L T + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 58 GGLKSTVYVKVFVSDENDNPPQFYPREYAASLSTQSTPGTAVLRVRAHDPDQGPHGRLSY 117
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 118 HILAGNSPPLFALDEHSGLLSVAWPLTRKAN 148
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H + T T+ V D ND P F
Sbjct: 988 RLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPSRS---ATQLLTVSVADVNDEAPAF 1044
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD-----LRVEWV 162
+Y + + E+ P GT + + A+D DLG N ++++ + FS D LR V
Sbjct: 1045 QQQEYRVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSGES-FSLDPDTGVLRTLRV 1103
Query: 163 INRSVDQHTN 172
++R + N
Sbjct: 1104 LDREEQEEIN 1113
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + + + L R EE L V + +GS P L+ ++VED+ND+ P
Sbjct: 1089 FSLDPDTGVLRTLRVLDRE-EQEEINLTVY-ARDRGSPP--LLTHVRVRVVVEDENDHAP 1144
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDLRV-EWV 162
F + SL +PE T+ + ASD D+G N +L ++ L +P+G F D+ E+
Sbjct: 1145 TFGSAHLSLEVPEGQDPQTLT-TLRASDPDVGANGQLQYHILDGDPSGAFVLDVASGEFG 1203
Query: 163 INRSVDQ 169
RS+D+
Sbjct: 1204 TMRSLDR 1210
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 461 ELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPSGTSVG 520
Query: 128 VVSASDADLGVNSKLSWN 145
VSA+D D G N +L+++
Sbjct: 521 RVSATDRDSGPNGRLTYS 538
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 1867 LQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 1905
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1329 GAAAGPLSTTVPVTITVRDVNDHIPTFPTSPLRLRLPRPGPSLSTPTLALATLRAEDRDA 1388
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1389 GANASI 1394
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V V A D DLG +++S+
Sbjct: 931 VTDENDNAPVF-ASPSRVRLPEDQPPGHVALHVVARDLDLGEAARVSY 977
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ G NP P T I V D NDN+P
Sbjct: 549 FRIHPQTGEVTTLQTLDRE-RQSSYQLLVQ--VQDGGNP-PRSTTGTVHIAVLDLNDNSP 604
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ V GT+V + A D D G N + + P LFS
Sbjct: 605 TFLQASGAAGGGLPIQVPDGVLPGTLVTTLQAKDPDEGENGTILYTLTGPGAELFS 660
Score = 35.0 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPN 150
T+ ++D NDN P F Y +PE P+ + V A+D D G ++S++
Sbjct: 1553 TVTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEANDLDQGSGGQISYSLAASQPAR 1612
Query: 151 GLFSSD 156
GLF D
Sbjct: 1613 GLFHVD 1618
>gi|291387506|ref|XP_002710179.1| PREDICTED: protocadherin gamma subfamily B, 3 [Oryctolagus
cuniculus]
Length = 833
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
F F I + N T RL + G L R +T E+ + + T P PL + + T+ +
Sbjct: 390 FPFKIIQDTKN-TYRLVTD-GALDRE-QTPEYNVTIAATDR--GQP-PLSSSISVTVHIS 443
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
D NDN P+F + Y + +PE+ P G + VSASD DLG N ++S+ ++LEP L S
Sbjct: 444 DVNDNAPVFHQAAYVVHVPENNPPGASIAQVSASDPDLGPNGQVSYSIVASDLEPRALSS 503
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + +IV D NDN P F Y SI E++P G+ V V A+D D GVN+ +++
Sbjct: 225 TTHIRVIVADANDNAPAFTQDVYKASIRENLPAGSSVLRVMATDPDEGVNAAITY 279
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+ ++++D NDN P F + L I E P G + SA D+D+G N++
Sbjct: 118 HVVVLIQDINDNPPTFSANITELEISELAPAGATFALESAQDSDVGANAR 167
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
C I V D NDN P ++ S I ED +GT V ++ A D D G+N ++
Sbjct: 331 CKIQIEVLDDNDNAPEMTLASESQLIQEDAELGTAVALIKAHDLDSGLNGEI 382
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 550 VLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 609
Query: 148 EPN--GLFSSDLR 158
+ + GLFS LR
Sbjct: 610 QASEPGLFSLGLR 622
>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
Length = 3180
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F NP T ++ TL L EE H++ V + G +P L GT I V D NDN
Sbjct: 70 FSLNPQTGIF----TLTARLDYEETQHYIIVAQAQDNG-HPS-LSGTVTVYINVIDLNDN 123
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P+F +S I EDVPVG+ V VSA+D D G N KL+++ +FS D ++ I
Sbjct: 124 APVFDPMSFSNEILEDVPVGSSVVTVSATDIDSGFNGKLTYS------IFSGDDNQDFKI 177
Query: 164 N 164
+
Sbjct: 178 S 178
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F +P T + TL R E ++L + S P T N TIIVED+NDN
Sbjct: 598 RFRIDPVTGVVYTNATLDRE-EWEVYYLII--MAQDSSTTDPRTATANLTIIVEDENDNT 654
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P FP S Y + I E G V V A D D+G N K+ ++
Sbjct: 655 PTFPQSLYEVYISERTVQGDFVFGVKAKDNDIGDNKKIVYD 695
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
+ + G L R L++ ++ + K +G P G I+ D+NDN+P+F QYS
Sbjct: 290 ILRATGKLDRELKS--NFTILLTAKDRGDPPNVTKGKIFIKIL--DENDNSPVFDPKQYS 345
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+PE+ +G V VSA+D D G+N ++ ++
Sbjct: 346 ASVPENASIGASVLQVSATDVDEGINGRVRYS 377
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE- 148
+ TI+V+ D NDN P+F S YS IPE+ G+VV V+A D D G N++L++N +
Sbjct: 5 DVTIVVQVTDTNDNPPMFKESAYSFDIPENAARGSVVGTVAAIDLDSGPNAQLTYNVISD 64
Query: 149 -PNGLFS 154
N +FS
Sbjct: 65 WANDVFS 71
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF+ +P + L R L+ +E+ LKV + PL TI ++DQNDN
Sbjct: 1019 KFVIDPISGNVTVAKPLDRELQ-DEYILKVAAIDGAWRSETPL------TITIQDQNDNA 1071
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-LGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P F S YS + PE + V V A+D D G NS +S++ + + LFS D ++
Sbjct: 1072 PEFEYSYYSFNFPELQEKNSFVGQVIATDKDKQGSNSIISYSLQQSSDLFSIDPATGEIV 1131
Query: 164 NR 165
+
Sbjct: 1132 TK 1133
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 36 APAFTFSIAKFIANPTTRLYK------NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG 89
+P F + FI + L+K + L+ R + + +P PL G
Sbjct: 476 SPPFNNQVRYFIKEGDSDLFKINASSGQISLLRTLDREAQDEYTLSLVAMDTGSP-PLTG 534
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ IIV+D NDN+P F Y S+ E++P T + A D D+G N+K+ ++ L
Sbjct: 535 SGTVKIIVQDVNDNSPDFQRQSYKTSVKENLPPETEILHPKAIDKDIGNNAKIRYSLL-- 592
Query: 150 NGLFSSDLRVEWV 162
G S R++ V
Sbjct: 593 -GDKSERFRIDPV 604
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNSKLSW 144
P+ C TI V D N+N P F + + +P+D VG ++Q+ + + D G+N+++ +
Sbjct: 1164 PMSSECLVTINVVDANNNKPKFKEHEDLVPVPQDATVGEKIIQLQAEDNLDFGINAEIEY 1223
Query: 145 NELEPNG--LFSSDLRVEWVI 163
N NG FS D W+I
Sbjct: 1224 NIFGGNGTTYFSIDKLNGWII 1244
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVGT + V D+NDN P F +S+++ E+ +G+ V V++SD D G N+ +++
Sbjct: 954 LVGTSTVLVSVLDKNDNPPRF-TRLFSVNVTENAEIGSFVIRVTSSDLDTGPNANATYSF 1012
Query: 147 LEPNG 151
+E G
Sbjct: 1013 VENPG 1017
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 84 PGP-LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
P P L T TI+++D ND P F +S + +I E++P+ TV+ V A D D G N +
Sbjct: 210 PEPRLSATVQVTILLKDVNDMAPEF-ISPKTTAISENIPLNTVIMTVKAVDKDEGRNGYV 268
Query: 143 SW 144
+
Sbjct: 269 EY 270
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
P T TII+ D NDN P F SQY + E+ P + + V A+D D N+ + +
Sbjct: 1374 PKETTATVTIILTDINDNAPQFNQSQYVAYLTENSPAKSFIFKVKATDIDSPKNAIIKYY 1433
Query: 145 --NELEPNGLFSSD 156
NE+ + LFS D
Sbjct: 1434 IKNEM--SALFSID 1445
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP-EDVPVGTVVQ 127
E W +V+++ NP PL I V D NDN PI Y+ SIP E+ P TV++
Sbjct: 837 EVWFEVKDS----DNP-PLKSFIEIEIKVTDANDNAPILENLLYNASIPEEESPPQTVIK 891
Query: 128 VVSASDADLGVNSKLSW---NELEPNGLFSSD 156
+ A D D N ++S+ N+ E SD
Sbjct: 892 -IEAHDDDSNENGRISYRLVNDYEETFAIDSD 922
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
P GT I + D NDN P+ + ++ ++ E+ P T + +SA+D DL
Sbjct: 1689 PETGTATVKITLTDINDNGPVIDTASFNGAVYENEPPNTSITTLSANDPDL 1739
>gi|344272202|ref|XP_003407924.1| PREDICTED: cadherin-18-like [Loxodonta africana]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 313
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|301773674|ref|XP_002922256.1| PREDICTED: cadherin-18-like [Ailuropoda melanoleuca]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 313
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
Length = 3295
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2348 AHDGPHEGHANLTVLVEDVNDNTPAFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGL 2407
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2408 ISYHLASPAEGFSVD 2422
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ +P + + GT++ R E ++ G P L T T+ V D ND+ P
Sbjct: 1795 FVLDPASGEF---GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAP 1850
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
FPV YS+ +PED P GT++ + A D D G N ++++
Sbjct: 1851 AFPVPAYSVEVPEDAPAGTLLLQLQAHDPDSGANGRVTY 1889
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ + D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2578 PRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2637
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2638 LSSGDPMGLFELD 2650
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ N G L R L E EH L V + H GS P T TI V D ND P F
Sbjct: 1590 RLHPNTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQLLTISVADVNDEAPAF 1646
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P +Y++ + E+ P GT + + A+D DLG N ++++
Sbjct: 1647 PQQEYTVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1683
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H L V+ T G++ T+ V+D ND+ P FP++ S S+ E+ P GT+V +
Sbjct: 2670 HQLVVQATDPAGAH----FALAPVTVEVQDVNDHGPAFPLNLLSTSLAENQPAGTLVTTL 2725
Query: 130 SASDADLGVNSKLSWNELE----PNG 151
A D D G KL ++ LE P+G
Sbjct: 2726 HAIDGDAGAFGKLHYSLLEAGPGPDG 2751
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T V T RAL EE + PL+ + VED+N
Sbjct: 1687 SCESFSLDPDT----GVLTTLRALDREEQEEISLTVYARDMGSPPLLTHVTVRVTVEDEN 1742
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSD 156
D+ P F S SL +PE T+ V+ ASD D+G N +L + L +P G F D
Sbjct: 1743 DHAPTFGNSHLSLEVPEGQDPQTLT-VLRASDPDVGANGQLQYRILDGDPAGAFVLD 1798
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 865 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 924
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 925 RVTFTLLAGGG 935
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 518 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 573
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 574 QFQKTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 613
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y++S+ GT V V A D D G + +LS+
Sbjct: 660 GGLKSMVYVKVFVSDENDNPPHFYPREYAVSLSAQSTPGTAVMRVRAHDPDQGPHGRLSY 719
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 720 HILAGNSPQLFALDEQTGLLTVAWPLTRRAN 750
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ P++ + V TL R + + V T G+ GPL T TI V D ND+ P
Sbjct: 1899 FLLEPSSGELRTVTTLDRE-QCPSYAFSV--TAVDGAAAGPLSTTVPVTITVRDVNDHAP 1955
Query: 106 IFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNSKL 142
FP S L +P P + + + A D D G N+ +
Sbjct: 1956 TFPTSPLRLRLPRPGPSLSTPTLALATLRAEDRDAGANASI 1996
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2254 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2309
Query: 147 LEPNG 151
L P+G
Sbjct: 2310 LSPSG 2314
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1063 ELYTLKVIAVSGSKAELGQQTGTATVKVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1122
Query: 128 VVSASDADLGVNSKLSWN 145
+ A+D DLG N +L+++
Sbjct: 1123 RILATDRDLGPNGRLTYS 1140
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND++P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2469 LQDQNDHSPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2507
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE GT + A DAD G
Sbjct: 119 PDGATVEVTVRVADINDHAPAFPQARATLQIPEHTAFGTRYPLEPARDADAG 170
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F P T + TL R ++ L + GS P GT + I V D NDN+P
Sbjct: 1151 FRIQPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVH--IAVLDLNDNSP 1206
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + IP+ VP GT+V + A D D G N + + P LFS
Sbjct: 1207 TFLQASGAAGGGLPIQIPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1262
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + T++ D ND+ P F S+Y + E + G+ V V ASDAD G N
Sbjct: 228 GSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANG 285
Query: 141 KLSWN----ELEPNGLFSSD 156
+++ + E +G FS D
Sbjct: 286 AVTYEINRRQSEGDGPFSID 305
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 48 ANPTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
A P RL G L R L E L VE T + + + V D+ND
Sbjct: 1479 AAPPLRLDARTGALSAPRGLDRETTPALLLLVEATDRPANATRRRAARVSARVFVTDEND 1538
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N P+F S + +PED G V A D DLG +++S+
Sbjct: 1539 NAPVF-TSPSRVRLPEDQRPGPAALHVVARDPDLGEAARVSY 1579
>gi|410949759|ref|XP_003981585.1| PREDICTED: cadherin-18 isoform 1 [Felis catus]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 313
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|126290970|ref|XP_001377719.1| PREDICTED: protocadherin gamma-A2-like [Monodelphis domestica]
Length = 816
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R +E L++ + G P GT + + D NDN P+F YS+++PE+
Sbjct: 196 LDRALDREKEPTLQIVLSAWDGGEP-IRSGTARIRVTILDVNDNAPVFTQPIYSMNVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VP GTV+ V+A+DAD G+NS++ +
Sbjct: 255 VPQGTVLLTVNATDADEGINSQVRY 279
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + L I E GT + + SA D D+GVNS L EL PN FS
Sbjct: 123 ITDINDNAPRFRAEKLELKISETTTPGTQLILESAYDPDVGVNS-LQGYELSPNHHFS-- 179
Query: 157 LRV----------EWVINRSVDQH 170
LRV E V++R++D+
Sbjct: 180 LRVQSGADGIKYPELVLDRALDRE 203
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ +E + +E G L G + V D NDN P ++ + SIPE+
Sbjct: 303 TLQNLDYEDERFYMMEAEAQDGLG---LWGRAKIHVTVVDVNDNAPEVTITSVTSSIPEN 359
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
P GT++ + D D G N ++
Sbjct: 360 APPGTIITLFHVHDRDSGKNGQV 382
>gi|395736283|ref|XP_003780468.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-16 [Pongo
abelii]
Length = 774
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R EE L++ T G +P P G +I V D +DN P F +
Sbjct: 189 RKYPELVLGKELDREEEPQLRLTLTALDGGSP-PRSGAAQVSIEVVDISDNAPEFEQPIH 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV-----EWVINRSV 167
+ IPE+ P+G++V VSA D D G N K+S+ +P+ S L V E + + V
Sbjct: 248 KVQIPENNPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGEIRLRKQV 307
Query: 168 DQHT 171
D T
Sbjct: 308 DFET 311
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 320 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 378
Query: 140 SK 141
K
Sbjct: 379 GK 380
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T+ + D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 436 NITVQISDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
V D ND++P+F + L IPE+ P+GT + A D D+G N+ K+S N
Sbjct: 123 VIDINDHSPMFTEKEMILKIPENSPLGTQYPLYHALDLDVGSNNVQNYKISLN 175
>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
Length = 3278
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P+FPV YS+ +PE
Sbjct: 1788 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPVFPVPSYSVEVPE 1846
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D PVGT++ + A D D G N ++ +
Sbjct: 1847 DAPVGTLLLQLQAHDPDDGDNGRVMY 1872
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2331 AHDGPHEGHANLTVLVEDVNDNVPTFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2390
Query: 142 LSWNELEPNGLFSSD 156
+S++ P F D
Sbjct: 2391 ISYHLASPAEGFRVD 2405
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P+ ++++D NDN+P FP + ++ +P++ GT + + A D D G NS
Sbjct: 849 GSGTPPVFAVARIRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPIYTLRALDPDSGANS 908
Query: 141 KLSWNELE-PNGLFSSD 156
++++N L +GLF+ D
Sbjct: 909 RITFNLLAGGDGLFTVD 925
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + +
Sbjct: 2561 PRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFT 2620
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2621 LSSGDPLGLFELD 2633
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + V G P PLV + ++ ++D NDN P
Sbjct: 502 FSIDPTSGIITTAATLDYELEPQPQLIVVAT---DGGLP-PLVSSATVSVALQDVNDNEP 557
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 558 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 597
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R L E EH L V H GS P T T+ V D ND P F
Sbjct: 1573 RLHATTGALSVVRPLDREQRAEHVLTVVALDH-GSPPRS--STQLLTVSVVDVNDEAPAF 1629
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
P +Y++ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1630 PQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNTGVLTTLR 1687
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 54 LYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
L +N G L+ R L E +H L V+ G++ T+ V+D ND+ P FP
Sbjct: 2632 LDENSGALRLSRPLDCETQAQHQLVVQAADPAGTH----FSLVPVTVEVQDVNDHGPAFP 2687
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2688 LSLLSTSLAENQPPGTLVTTLHAIDGDAGTFGRLRYSLLE 2727
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 47 IANPTTRLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
++ + L N G L RAL EE + PL+ + VED+ND+
Sbjct: 1669 VSGESFSLDPNTGVLTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHT 1728
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
P F + SL +PE T+ + ASD D G+N +L + L + +G F+ DL
Sbjct: 1729 PTFGNTHLSLEVPEGQDPQTLT-TLRASDPDGGLNGQLQYRILDGDSSGAFALDL 1782
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT +I+ +QND++P L++ E+ P GT V
Sbjct: 1047 ELYTLKVMAVSGSKAELGQQTGTATVRVIILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1106
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1107 RVFATDRDSGPNGRLTYS 1124
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2237 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2292
Query: 147 LEPNG 151
L P+G
Sbjct: 2293 LSPSG 2297
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 644 GGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSY 703
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 704 HILAGNSPPLFALDAHSGLLTVAWPLGRRAN 734
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 103 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 154
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV----GTVVQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + A D D
Sbjct: 1914 GAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLRAEDRDA 1973
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1974 GANASI 1979
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2452 LKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2490
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1516 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1562
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 192 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 247
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 248 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 289
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1135 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDGGSPPRSATGTVHVAVL--DLNDNSP 1190
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1191 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1246
>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
Length = 3291
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P+FPV YS+ +PE
Sbjct: 1801 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPVFPVPSYSVEVPE 1859
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D PVGT++ + A D D G N ++ +
Sbjct: 1860 DAPVGTLLLQLQAHDPDDGDNGRVMY 1885
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2344 AHDGPHEGHANLTVLVEDVNDNVPTFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2403
Query: 142 LSWNELEPNGLFSSD 156
+S++ P F D
Sbjct: 2404 ISYHLASPAEGFRVD 2418
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P+ ++++D NDN+P FP + ++ +P++ GT + + A D D G NS
Sbjct: 862 GSGTPPVFAVARIRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPIYTLRALDPDSGANS 921
Query: 141 KLSWNELE-PNGLFSSD 156
++++N L +GLF+ D
Sbjct: 922 RITFNLLAGGDGLFTVD 938
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + +
Sbjct: 2574 PRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFT 2633
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2634 LSSGDPLGLFELD 2646
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + V G P PLV + ++ ++D NDN P
Sbjct: 515 FSIDPTSGIITTAATLDYELEPQPQLIVVAT---DGGLP-PLVSSATVSVALQDVNDNEP 570
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 571 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 610
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R L E EH L V H GS P T T+ V D ND P F
Sbjct: 1586 RLHATTGALSVVRPLDREQRAEHVLTVVALDH-GSPPRS--STQLLTVSVVDVNDEAPAF 1642
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
P +Y++ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1643 PQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNTGVLTTLR 1700
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 54 LYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
L +N G L+ R L E +H L V+ G++ T+ V+D ND+ P FP
Sbjct: 2645 LDENSGALRLSRPLDCETQAQHQLVVQAADPAGTH----FSLVPVTVEVQDVNDHGPAFP 2700
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2701 LSLLSTSLAENQPPGTLVTTLHAIDGDAGTFGRLRYSLLE 2740
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 47 IANPTTRLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
++ + L N G L RAL EE + PL+ + VED+ND+
Sbjct: 1682 VSGESFSLDPNTGVLTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHT 1741
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
P F + SL +PE T+ + ASD D G+N +L + L + +G F+ DL
Sbjct: 1742 PTFGNTHLSLEVPEGQDPQTLT-TLRASDPDGGLNGQLQYRILDGDSSGAFALDL 1795
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT +I+ +QND++P L++ E+ P GT V
Sbjct: 1060 ELYTLKVMAVSGSKAELGQQTGTATVRVIILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1119
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1120 RVFATDRDSGPNGRLTYS 1137
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2250 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2305
Query: 147 LEPNG 151
L P+G
Sbjct: 2306 LSPSG 2310
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 657 GGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSY 716
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 717 HILAGNSPPLFALDAHSGLLTVAWPLGRRAN 747
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 116 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 167
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV----GTVVQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + A D D
Sbjct: 1927 GAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLRAEDRDA 1986
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1987 GANASI 1992
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2465 LKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2503
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1529 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1575
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 205 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 260
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 261 SLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 302
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1148 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDGGSPPRSATGTVHVAVL--DLNDNSP 1203
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1204 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1259
>gi|14196477|ref|NP_114476.1| protocadherin gamma-A7 isoform 2 precursor [Homo sapiens]
gi|5457076|gb|AAD43774.1|AF152514_1 protocadherin gamma A7 short form protein [Homo sapiens]
gi|119582347|gb|EAW61943.1| hCG1982215, isoform CRA_v [Homo sapiens]
gi|187950431|gb|AAI36748.1| Protocadherin gamma subfamily A, 7 [Homo sapiens]
gi|187953335|gb|AAI36749.1| Protocadherin gamma subfamily A, 7 [Homo sapiens]
Length = 817
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDETKYPELV--LERVLDREEERVHHLVLTASDGGDP-PRSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 225 TAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ I E+ P G + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGEISTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|403255764|ref|XP_003920581.1| PREDICTED: protocadherin gamma-A10 [Saimiri boliviensis
boliviensis]
Length = 829
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G +P GT ++ V D NDN P+F + +Y +S+PE+
Sbjct: 196 LERALDREEEAIHHLVLTASDGGDPL-RSGTVLVSVTVFDANDNAPVFTLPEYRVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 255 LPVGTQLLTVTATDRDEGANGEVTYS 280
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E G G + T I VED NDN+P ++ + ED P+GTV+
Sbjct: 311 ETSFYEIEIQAEDG---GAYLATSKVLITVEDVNDNSPEVTLTSLFSPVTEDSPLGTVIA 367
Query: 128 VVSASDADLGVNSKLSWNEL 147
+++ D D G N +++ + L
Sbjct: 368 LLNVHDLDSGQNGQVTCSIL 387
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F L I E+ G + A+D D+GVNS S+ +L PN FS
Sbjct: 121 IEVTDINDNAPKFQAENLDLKINENAATGMRFPLPEATDPDVGVNSLQSY-QLSPNKHFS 179
Query: 155 SDLRV----------EWVINRSVDQH 170
LRV E V+ R++D+
Sbjct: 180 --LRVQSRASGVKYPELVLERALDRE 203
>gi|332821712|ref|XP_003310818.1| PREDICTED: cadherin-18 isoform 2 [Pan troglodytes]
Length = 574
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|332211631|ref|XP_003254918.1| PREDICTED: protocadherin-16 [Nomascus leucogenys]
Length = 3297
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2350 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2409
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2410 ISYHLASPASGFSVD 2424
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G +P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1807 GTMRPLDREVEPAFQLRIEARDGGHPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1865
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1866 DVPAGTLLLQLQAHDPDAGANGHVTY 1891
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2595 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2652
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 867 GSGMPPAFAIARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 926
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 927 RVTFTLLAGGG 937
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1592 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1648
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1649 QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY 1685
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2692 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2746
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + ++ ++D NDN P
Sbjct: 520 FSIDPTSGIITTAASLDYELEPQPQLTVVAT---DGGLP-PLASSATVSVALQDVNDNEP 575
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 576 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 615
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P P + + VED+ND+ P F + SL +PE
Sbjct: 1704 TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1762
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ ++ ASD D+G N +L + L +P+G F D
Sbjct: 1763 QDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDF 1801
Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 662 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISVQSPPGTAVLRLRAHDPDQGSHGRLSY 721
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 722 HILAGNSPPLFALDEQSGLLTVAWPLARRAN 752
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2256 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2311
Query: 147 LEPNG 151
L P+G
Sbjct: 2312 LSPSG 2316
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1933 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 1992
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1993 GANASI 1998
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2471 LQDQNDHAPSFTLPHYHVAVTEDLPPGSTLLTLEATDAD 2509
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1153 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1208
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1209 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1264
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 100 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 159
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 160 RYPLEPARDADAG 172
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1535 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1581
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1065 ELYVLKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1124
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1125 RVFATDRDSGPNGRLTYS 1142
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 210 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 265
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+ G+ V V ASDAD GVN +++
Sbjct: 266 SLGPGSPVLQVFASDADAGVNGAVTY 291
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 787 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 839
>gi|444713187|gb|ELW54095.1| Protocadherin beta-18 [Tupaia chinensis]
Length = 1696
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ L++ T G +P P GT ++V D NDN P F + Y
Sbjct: 1295 RKYPELVLDKDLDREEQAELRLTLTALDGGSP-PRSGTIQIRVLVMDVNDNVPEFAQTLY 1353
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+ PVG++V VSA+D D G N ++S++
Sbjct: 1354 EVQVPENSPVGSLVLKVSATDLDTGTNGEISYS 1386
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ L++ G P P GT I + D NDN P F Y
Sbjct: 651 RKYPELVLDKELDREEQTELRLALMAVDGGIP-PKTGTTQVLIDILDINDNAPEFSQPLY 709
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ IPE+ PVG++V VSA D D G+N ++ ++
Sbjct: 710 QVQIPENSPVGSIVTTVSARDLDTGINGEIFYS 742
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G P P GT I+V D NDN P F Y + IPE+ P+ ++V VSA+D D
Sbjct: 213 TAFDGGFP-PRSGTAQIRIVVLDINDNAPEFERPLYEVQIPENSPLDSLVIKVSATDLDA 271
Query: 137 GVNSKLSWN 145
GVN +LS++
Sbjct: 272 GVNGELSYS 280
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++V+D ND++P FP + +L IPE+ P GTV + A D D+G N+ + ++ PN F
Sbjct: 1227 LLVKDINDHSPEFPEREMTLKIPENSPPGTVFPLTKAQDLDVG-NNNVQKYDIGPNSHF 1284
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+DAD G N++++++ L P+
Sbjct: 439 TVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPH 495
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+DAD G N++++++ L P+
Sbjct: 900 TVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPH 956
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+DAD G N++++++ L P+
Sbjct: 1544 TVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPH 1600
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++V D NDN P+FP SQ L I E+ G V + +A D D+G+NS
Sbjct: 583 LLVSDINDNPPVFPESQMILKIMENTLPGAVFPLKNAQDLDVGINS 628
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K S+ L G C I V D NDN P V+ +PE+ P TV + S D D G N
Sbjct: 782 KASDGSGLSGKCTVIIQVVDINDNAPELTVASIVSPVPENSPEITVA-LFSIQDRDSGEN 840
Query: 140 SKLSWN 145
+++ +
Sbjct: 841 GRMACS 846
>gi|266454921|ref|NP_001161139.1| cadherin-18 isoform 2 preproprotein [Homo sapiens]
gi|194379154|dbj|BAG58128.1| unnamed protein product [Homo sapiens]
Length = 574
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|262263247|tpg|DAA06624.1| TPA_inf: protocadherin gamma b22 isoform [Anolis carolinensis]
Length = 938
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+++L R EH L++ T G P P GT + I V D NDN PIF Y +SI E
Sbjct: 196 LQKSLDRESEHSLQLILTALDGGEP-PKTGTAHIWINVTDANDNPPIFKEEVYKVSIVES 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP+G+++ VSA D D GVN+++ ++
Sbjct: 255 VPIGSLLLQVSALDKDDGVNAQIEYH 280
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL ++ + D NDN+P F Y++ +PE+ P G + + ASD DL N+ ++++
Sbjct: 431 PLSSNKTISLQISDINDNSPTFEEKAYNIFVPENNPSGASIFTIKASDPDLDRNAHVTYS 490
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G LV C + ++D NDN P ++ S IPE GTV+ +++ D D G N ++
Sbjct: 325 GGLVAHCKIDVTIQDVNDNVPEMNIASLSNPIPEYSVPGTVIALINVKDRDSGENGEI 382
>gi|14039475|gb|AAK53236.1|AF326311_1 protocadherin-betaR [Mus musculus]
Length = 792
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P P GT I+V D NDN P FP Y + PE+ P+G VV V+ D D
Sbjct: 213 TALDGGSP-PRSGTATIHILVLDINDNAPQFPQELYEIQAPENSPIGLVVIKVTGEDVDS 271
Query: 137 GVNSKLSWNELEPNGLFSSDLRVEWVIN 164
GVN+++S++ + S D+R + IN
Sbjct: 272 GVNAEISYSFFDA----SEDIRATFQIN 295
>gi|440902413|gb|ELR53210.1| Protocadherin gamma-B5, partial [Bos grunniens mutus]
Length = 743
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ + ++ T G +P PL GT I V D NDN P+F Y +++ E+VP GT
Sbjct: 198 REQQSYHRLVLTASDGGDP-PLSGTTELQIQVTDANDNPPVFTQDVYRVNLGENVPPGTT 256
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D G+NS+++++
Sbjct: 257 VLQVSATDQDEGINSEIAYS 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
GTL R E + V K K PL + T+ + D NDN P+F + Y + +
Sbjct: 399 AGTLDREQIPEYNVTIVATDKGKP----PLCTHTSVTLHITDVNDNAPVFHQASYVVHVA 454
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
E+ P G ++ V ASD DLG N ++S+ ++LEP L S
Sbjct: 455 ENNPPGASIEQVRASDPDLGPNGQVSYSIVASDLEPRALSS 495
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ED ND+ P F + + L I E P GT + A DAD+G+NS ++
Sbjct: 119 IEDVNDHTPKFSQNAFELQISESTPPGTRFILEVAEDADIGLNSLQTY 166
>gi|431917281|gb|ELK16817.1| Cadherin-18 [Pteropus alecto]
Length = 790
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSIVNGDGI 313
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|395736298|ref|XP_003776732.1| PREDICTED: protocadherin gamma-B5 [Pongo abelii]
Length = 818
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + K R ++ + ++ T G +P PL GT I V D NDN P+F Y +
Sbjct: 191 YPELALEKTLDREQQSYHRLVLTALDGGHP-PLSGTTELRIRVTDANDNPPVFNRDVYRV 249
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S+ E+VP GT V VSA+D D G+NS+++++
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYS 280
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R +T E+ + + T PL + + + + D NDN P+F + Y +S+PE
Sbjct: 404 GTLDRE-QTPEYNVTITATDRGKP---PLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFS 154
+ P G + V ASD DLG+N ++S++ +LEP L S
Sbjct: 460 NNPPGASIAQVCASDPDLGLNGQVSYSIMAGDLEPLALAS 499
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
+ED ND++P F + + L I E GT + A DAD+G+NS KLS N
Sbjct: 123 IEDINDHSPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLN 175
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 67 TEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
T + L E TK + + G LV C I ++D+NDN+P I E+
Sbjct: 298 TTQKKLDFEETKEYSMVVEARDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAV 357
Query: 122 VGTVVQVVSASDADLGVNSKLSWN 145
GT++ ++ D D G N +++
Sbjct: 358 PGTLIALIKIHDQDSGENGEVNCQ 381
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1710 GTMRPLDREVEPAFQLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPSYSVEVPE 1768
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1769 DAPAGTLLLQLQAHDPDAGANGRVTY 1794
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F + Y + + E P G+ + VSA+D D G N
Sbjct: 2253 AHDGPHEGRANLTVLVEDVNDNAPAFSQTLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2312
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2313 VSYHLASPAEGFSID 2327
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2483 PRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2542
Query: 144 WNELEPNGLF-----SSDLRV 159
+ +P GLF S DLR+
Sbjct: 2543 LSSGDPLGLFELDESSGDLRL 2563
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + G +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1607 TLRALDREEQEEINLTVYARDGGSP-PLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEG 1665
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D+G N +L + L +P+G F DL
Sbjct: 1666 QDPQTLT-TLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1704
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS
Sbjct: 866 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPSSTAPGTLIYTLRALDPDSGVNS 925
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 926 RIAFPLLAGGG 936
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2595 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2649
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + L L + + V G P PL + +++++D NDN P
Sbjct: 519 FSIDPTSGIVTTAALLDYELEPQPQLIVVAT---DGGLP-PLSSSATVSVVLQDVNDNEP 574
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 575 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 614
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V +L R R E + L V + H GS P T T+ V D ND P F +YS+ +
Sbjct: 1506 VRSLDREQRAE-YVLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAPAFQQLEYSVLLR 1561
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ P GT + + A+D DLG N ++++
Sbjct: 1562 ENSPPGTSLLTLQATDPDLGTNGQVTY 1588
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2159 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2214
Query: 147 LEPNG 151
L P+G
Sbjct: 2215 LSPSG 2219
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNS 140
GPL T TI V D ND+ P FP S L +P PV + + + A D D G N+
Sbjct: 1840 GPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVLSTPTLPLATLRAEDRDAGANA 1899
Query: 141 KL 142
+
Sbjct: 1900 SI 1901
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 661 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY 720
Query: 145 NELEPNG--LFSSD-----LRVEWVINR 165
+ L N LF+ D L V W + R
Sbjct: 721 HILAGNSPPLFALDEHSGLLPVAWPLAR 748
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2374 LQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2412
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y ++ E
Sbjct: 209 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAAVSE 264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 265 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 306
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1152 FRIHPQTGEVTTLQTLDRE-RQSSYQLLVQ-VQDAGSPPRSTTGTVH--IAVLDLNDNSP 1207
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
F + + +P+ VP GT+V + A D D G N +
Sbjct: 1208 TFLQASGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTI 1250
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ L IPE +GT + A DAD G
Sbjct: 120 PDGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAG 171
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G T + + +QND++P L++ E+ P GT V
Sbjct: 1064 ELYTLKVMAVSGSKAELGQQTATATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1123
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G+N +L+++
Sbjct: 1124 RVFATDRDSGLNGRLTYS 1141
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-LGVNSKL 142
PGP G T + V+D+N++ P F +L++PE+ G + ASDAD G NS +
Sbjct: 1330 PGP-GGLTVTAVRVQDENEHAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDV 1388
Query: 143 SWNEL 147
+ L
Sbjct: 1389 RYRLL 1393
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLG-VNSKLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + LG V LS +P GLFS D
Sbjct: 786 PVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVTVALSGG--DPRGLFSLD 838
>gi|57222296|ref|NP_001009448.1| cadherin-19 precursor [Rattus norvegicus]
gi|56603562|dbj|BAD80717.1| Cadherin19 [Rattus norvegicus]
Length = 770
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L ++ + + K PG L GT +I + D NDN P
Sbjct: 195 FSVEPTTGVIRISSKMDREL--QDTYCVIIQAKDMLGQPGALSGTTTISIKLSDINDNKP 252
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +I E P GT + + A D D+G N+++ ++
Sbjct: 253 IFKESFYRFTISESAPSGTTIGKIMAYDDDIGENAEMDYS 292
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V D NDN P F Y +PE P GT V V+A+DAD G ++++ +N +
Sbjct: 134 IRVSDVNDNEPRFLDEPYEAIVPEMSPEGTFVIKVTANDADDPTSGYHARILYNLEQGQP 193
Query: 152 LFS 154
FS
Sbjct: 194 YFS 196
>gi|291232409|ref|XP_002736151.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 2630
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSN--PGPLVGTCNTTIIVEDQNDNNPIFPVS 110
R+ N+G + A R + ++ ++ P PL+G C I + D NDN P F
Sbjct: 596 RIDPNLGIITTARRFDREVKRIYGISVAATDLAPDPLIGICQMNIEITDVNDNTPHFEQR 655
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
Y + ED VGT V+A DAD G N+++S++ L FS + WV
Sbjct: 656 SYEYQLREDTQVGTSFLRVAAQDADTGYNAEISYS-LSDEEYFSVNNATGWV 706
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL L E+ + V N + ++ G L G+ TI +ED NDN P
Sbjct: 1249 FAIDPVT---AEITTLVDWLDRED--VPVYNIVVEATDGGGLTGSATATIELEDINDNAP 1303
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +Y + E + VG V V+A D D+GVN++L +
Sbjct: 1304 EFTEDKYYRAASESLLVGASVLTVTALDMDVGVNAQLDY 1342
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL I + D NDN P+F + Y S+PE GT V V+A DAD G N++++++
Sbjct: 846 PLPSYATVEINLIDVNDNVPLFSLPNYGASVPEMSIQGTFVFQVTAEDADTGSNAEITYS 905
Query: 146 ELE 148
+E
Sbjct: 906 IIE 908
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 95 IIVEDQNDNNPIFP-VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------- 145
I V D N+N P+FP + Y+ ++ E+ P GT V V A+DAD+G N ++ ++
Sbjct: 533 IQVNDVNNNRPVFPNCANYNPTVAENSPEGTTVTQVLATDADVGTNGQVEYSIVRRETAD 592
Query: 146 ---ELEPN-GLFSSDLRVEWVINR 165
++PN G+ ++ R + + R
Sbjct: 593 LNFRIDPNLGIITTARRFDREVKR 616
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 83 NP-GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
NP P T I+V D NDN P F +++ ++ ED G + V+A+D D G NS+
Sbjct: 961 NPDAPNSDTAAVRIVVSDINDNAPAFDSTEFYATVEEDRETGFAITTVTATDEDEGANSQ 1020
Query: 142 LSW 144
+ +
Sbjct: 1021 IRY 1023
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+F+ +P + + L R + W L+ G+ L G + I + D NDN
Sbjct: 1137 EFVIDPHSGVIHATKALDR--EDQAQWILQAVAADEDGAG---LDGFADIVISLRDINDN 1191
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELE 148
P FP Y ++PE GT V ++A D D G N++ ++ +E
Sbjct: 1192 APTFPNGPYMGTVPEHSLAGTYVMTMAAVDLDDPNEGDNAQCTYKIIE 1239
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
T I VED NDN P+F + Y S+ E+ + T++ V A+DAD
Sbjct: 1393 FCDTAECLITVEDFNDNPPVFDPNLYQASVYENASLNTILGTVYATDAD 1441
>gi|332228099|ref|XP_003263229.1| PREDICTED: cadherin-18 isoform 2 [Nomascus leucogenys]
Length = 574
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGM 313
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P T N T+ V D+NDNNPIF Y +I EDV VG+ V V+A D D GVN ++ +
Sbjct: 1133 APRTSTTNITVAVSDENDNNPIFTDPSYQQTIQEDVSVGSTVIRVTAQDRDEGVNGEVFY 1192
Query: 145 N-ELEPNGLFSSD 156
E NG+F D
Sbjct: 1193 FLSNETNGMFRID 1205
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R LR + ++L+V + GS P T N + V D NDN+P F Y S+ E++
Sbjct: 367 LDRELR-DSYFLQVV-ARDNGS--PPRNATANVRVTVTDDNDNDPRFTQESYHFSLVENL 422
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
P GT V V A DAD+G N L ++ + N F
Sbjct: 423 PTGTTVGTVFAVDADIGNNGDLDFSIIPNNSSF 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALR---TEEHWLKVENTKHKGSNPGPLVGTCNTTI 95
T++I + +A + + G ++ A R E+ V G+ P G + +
Sbjct: 978 LTYNIPRGVAEDRFTIEEQTGVIRTAFRLDREEKDSYIVTAYARDGAYPSRF-GFTSVVV 1036
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLF 153
V D ND+ P+F ++Y +++PE+ P V+ V A DAD+G N ++ + ++ N G F
Sbjct: 1037 SVLDTNDHAPVFKDAEYMMTVPENQPNYGVIHTVVAYDADIGTNGQVRYEIIDGNVGGKF 1096
Query: 154 SSDL---RVEWVINRSVDQHT 171
+ D + + ++++D+ T
Sbjct: 1097 AVDAVTGELSVISDQALDRET 1117
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 46 FIANPTT-RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +PTT R+Y + L E + N + NP P+ G I + D NDN
Sbjct: 143 FAIDPTTGRIYTQLN-----LDHETVSSLLLNIQASSGNP-PVYGRAQVNITILDINDNR 196
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFS-SDLRVEWV 162
P F V+ S++I E+V GT++ V SA D D G N + ++ L + LFS + + E
Sbjct: 197 PEFTVATESVAITENVSPGTIIFVASAQDQDAGSNGLVRYSLLNNQDNLFSVNSISGEVK 256
Query: 163 INRSVD 168
I RSVD
Sbjct: 257 ILRSVD 262
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
D+NDN P FPV Y +PE PVGT+V A D D G+ LS+
Sbjct: 1995 DENDNPPDFPVLMYLEDVPEGRPVGTLVFTAEARDKDAGIYGTLSY 2040
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+T + L VE T + T I+VED NDN P+F VS+ + ED PVG
Sbjct: 798 QTSQFTLVVEATDQPVNLSHARTKTTTARILVEDVNDNTPVF-VSRTETYVMEDEPVGYH 856
Query: 126 VQVVSASDADLGVNSKLSWN----------ELEPN-GLFSSDLRVE------WVINRSVD 168
V V A D D G N ++++ L+PN GL + + R++ +V+N +
Sbjct: 857 VMYVIAVDDDFGDNGRVTYQIVSGNQGGKFLLDPNTGLLAIERRLDRETESRYVLNITAT 916
Query: 169 QH 170
H
Sbjct: 917 DH 918
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
KF+ +P T L ++R L E V N + TI V D NDN
Sbjct: 884 GKFLLDPNTGLLA----IERRLDRETESRYVLNITATDHGTPSRSASHLITIHVRDVNDN 939
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P F Y S+ E+ GT V ++A DAD G N L++N P G+ +E
Sbjct: 940 QPRFLQDTYQASVSENQSPGTSVIQITALDADAGTNGVLTYN--IPRGVAEDRFTIE 994
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T ++V+D ND++PIF +QY I E+ +G V V A DAD G N+ + +
Sbjct: 1880 TVTVYVLVDDVNDHSPIFNSTQYVAQISEEAVIGAFVVRVFAFDADSGPNADIHY 1934
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N I V D+NDN P+F Y + I E VP V V+A+D D G N++++++
Sbjct: 1661 TNVEINVLDENDNPPVFDQQTYQVDIAEMVPPHYSVATVTATDRDAGSNAEITYS 1715
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 46 FIANPTTRLYK-----NVGTLKRALRTEEHWLKVENTKHKGSNP-GPLVGTCNTTIIVED 99
F++N T +++ + T R L E+ + + P GP T+ + D
Sbjct: 1193 FLSNETNGMFRIDNTSGIITTTRLLDREKQSVYSFDAYASDRGPFGPRTSNVRVTVDISD 1252
Query: 100 QNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NDN P+F + +I ++ V V V+A D D G N+++ +
Sbjct: 1253 VNDNAPVFTQVPFETTIERNIGVNQQVVTVTAEDKDTGSNAEILY 1297
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN------ 150
+ D+NDN P F +Y+ S+ E G V VSA+DAD G NS++ ++ + N
Sbjct: 1461 LRDENDNAPRFDQDRYTTSVWEGNDRGMFVIQVSATDADSGTNSEVQYSIVSGNHDNAFV 1520
Query: 151 -----GLFSSDLRVEWVIN-------RSVDQHT 171
G+ S+++R++ + R+VD+ T
Sbjct: 1521 IDRDRGIISTNVRMDREVRDSYRLELRAVDKGT 1553
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
I V D NDN P+F S S+ + E + G+ + V A D D G N ++S+ ++ N G
Sbjct: 612 IHVTDSNDNAPVFVNSTISIEVEEGLEAGSTIGSVHALDNDEGENGRVSYEIMQGNLYGT 671
Query: 153 FSSD 156
F D
Sbjct: 672 FGVD 675
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 51 TTRLYKNVGTLKRAL--RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
TT + V KR L T + V + +G+ P T + I+VED NDN P F
Sbjct: 458 TTGHQRGVIKTKRPLDRETTARYDLVLKVRDRGTPPRTATATLH--IVVEDMNDNAPYFS 515
Query: 109 VS-QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
S QY + E P GT V V A D D G N +++
Sbjct: 516 HSGQYLGEVEEHQPNGTEVIRVLADDPDNGENGTITY 552
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+I++D+NDN P+F + Y + +PE V V+A D D G+N +++
Sbjct: 293 VIIQDENDNGPMFSPTFYDVQVPESASVNYRFLQVTALDRDSGLNEFITY 342
>gi|440902794|gb|ELR53536.1| Cadherin-18, partial [Bos grunniens mutus]
Length = 577
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 2 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 61
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 62 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 100
>gi|338718925|ref|XP_001917229.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-9-like [Equus caballus]
Length = 789
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D DLG N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDLGENAEIEYSIAEGDG 312
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKELY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|395817796|ref|XP_003804086.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5 [Otolemur
garnettii]
Length = 756
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ + ++ T G +P P GT I V D NDN P+F + Y +S+ E+VP GT
Sbjct: 140 REQQSYHRLILTALDGGDP-PQSGTTEIRIQVTDANDNPPVFSQNVYRVSLAENVPPGTA 198
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V VSA+DAD G+NS++ ++ + FS
Sbjct: 199 VLQVSATDADEGINSEIIYSFYKTGQAFS 227
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GTL R T+E+ + + T PL + + + + D NDN P+F Y +++ E
Sbjct: 342 GTLDRE-HTQEYNVTITATDRGKP---PLSSSSSVILCIGDVNDNAPVFHHDSYLVNVAE 397
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSASD DLG+N+ +S+ ++LEP L S
Sbjct: 398 NNPPGASIAQVSASDPDLGLNAHISYSIVASDLEPRMLSS 437
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G + G LV C I ++D+NDN+P I E+VP GT++ ++ D D G N
Sbjct: 254 EGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMIMENVPPGTLIALIKIHDQDSGEN 313
Query: 140 SKL 142
++
Sbjct: 314 GEV 316
>gi|334311081|ref|XP_001377729.2| PREDICTED: protocadherin gamma-A2-like [Monodelphis domestica]
Length = 834
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R +E L++ + G P GT + + D NDN P+F YS+++PE+
Sbjct: 196 LDRALDREKEPTLQIVLSAWDGGEP-IRSGTARIRVTILDVNDNAPVFTQPIYSMNVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
VP GTV+ V+A+DAD G+NS++ +
Sbjct: 255 VPQGTVLLTVNATDADEGINSQVRY 279
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + L I E GT + SA D D+GVNS L EL PN FS
Sbjct: 123 ITDINDNAPRFRAEELELKISETTTPGTQFILESAYDPDVGVNS-LQGYELSPNHHFS-- 179
Query: 157 LRV----------EWVINRSVDQH 170
LRV E V++R++D+
Sbjct: 180 LRVQSGADGIKYPELVLDRALDRE 203
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ V D NDN P ++ + SIPE+ P GT++ + D D G N ++
Sbjct: 335 VTVVDVNDNAPEVTITSVTSSIPENAPPGTIITLFHVHDRDSGKNGQV 382
>gi|11056063|ref|NP_061743.1| protocadherin gamma-A7 isoform 1 precursor [Homo sapiens]
gi|37999836|sp|Q9Y5G6.1|PCDG7_HUMAN RecName: Full=Protocadherin gamma-A7; Short=PCDH-gamma-A7; Flags:
Precursor
gi|5456948|gb|AAD43721.1| protocadherin gamma A7 [Homo sapiens]
gi|119582367|gb|EAW61963.1| hCG1982215, isoform CRA_ap [Homo sapiens]
Length = 932
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDETKYPELV--LERVLDREEERVHHLVLTASDGGDP-PRSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 225 TAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ I E+ P G + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGEISTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVT 383
>gi|291394467|ref|XP_002713684.1| PREDICTED: cadherin 19, type 2 [Oryctolagus cuniculus]
Length = 769
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L+ +E+W+ ++ G + G L GT + I + D NDN P
Sbjct: 196 FSIEPTTGVIRISSKMDRELQ-DEYWVIIQAKDMIGQS-GALSGTTSVLIKLWDVNDNKP 253
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +S+ E P GT + + A D D+G N+++ ++
Sbjct: 254 IFKESFYRMSVSESAPTGTSIGKIMAHDNDIGENAEMDYS 293
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 6 IGKGYEYNHWSISKLLESRYLHLRPKSGMYAP--AFTFSIAKFIANPTTRLYKNVGTLK- 62
+ +G+ +N +S+ + + + +L R +S + +F + + A + + G +
Sbjct: 41 VKRGWVWNQFSVPEEMNTSHLVGRLRSDLDNGNNSFQYKLLGAGAGTIFTIDEKTGDIHA 100
Query: 63 -RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDV 120
+ L EE L + + G V + +I V D NDN P F Y ++PE
Sbjct: 101 VQRLDREEQSLYTLRAQVVDTTTGKAVEPESEFVIRVSDVNDNEPKFLDGPYEATVPELS 160
Query: 121 PVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
P GT V V+ASDAD G N++L ++ L+ FS
Sbjct: 161 PEGTFVIQVTASDADDPSTGNNARLLYSLLQGQPYFS 197
>gi|380802289|gb|AFE73020.1| protocadherin beta-16 precursor, partial [Macaca mulatta]
Length = 278
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE L++ T G +P P GT I V D NDN P F Y + IPE+ +G++
Sbjct: 9 REEEPQLRLTLTALDGGSP-PRSGTAQVHIEVVDINDNAPEFEQPIYKVRIPENSSLGSL 67
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
V VSA D D G N K+S++ +P+ S L V
Sbjct: 68 VATVSARDLDSGANGKISYSLFQPSEDISKTLEV 101
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G L G C + V D NDN P +S + IPE+ P VV V S SD D G N
Sbjct: 127 KATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSP-EIVVAVFSVSDPDSGNN 185
Query: 140 SK 141
K
Sbjct: 186 GK 187
>gi|449677345|ref|XP_002162352.2| PREDICTED: protocadherin Fat 1-like [Hydra magnipapillata]
Length = 2676
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQND 102
A F + TT + R +++ L + G +P G+C I +ED ND
Sbjct: 2115 ADFKIDNTTGVITTNKVFDREIKSSYIVLVIALDGGHGRDPAERNSGSCQLEIQIEDIND 2174
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
++PIF V +Y +SI E+ P+ +VV VSA D D G N+ ++++ ++PN + +S+ +++
Sbjct: 2175 HSPIFSVQKYDISIAENTPIDSVVLEVSAQDQDEGKNALITYS-IKPN-VITSNFKID 2230
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSL 114
K+ G ++ +L+ + + + G +G +I+ED NDN+PIF SQY
Sbjct: 2011 KDTGVVRITTVNNPSFLRDDYILNITATDGINIGYFALKVIIEDVNDNSPIFRKCSQYKA 2070
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE-----PNGLFSSDLRVE 160
++PE +P+ T V VSASD D G N ++ ++ E PN FS+D +++
Sbjct: 2071 TVPEQMPINTKVIQVSASDLDRGRNGEVEYDIQETQKDNPNK-FSADFKID 2120
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +ED+N+N PIF Y++S+ +P+G V V+A+D D GVN +++++
Sbjct: 728 VTIEDKNNNKPIFSQESYAISVIGSIPLGKSVVQVNATDEDGGVNGRITFD 778
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 95 IIVEDQNDNNPIFPVSQYSLS-IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-- 151
I + D NDN P+F +S Y + E G +V+ V+A+DAD +N K+ ++ LEP+
Sbjct: 2378 IQIIDVNDNTPLFVLSTYEFGKVAEGKSAGVIVEQVNATDADSDINGKVLYS-LEPSAEA 2436
Query: 152 -LFSSD-----LRVEWVINRSV 167
+FS D +R + V +R +
Sbjct: 2437 DMFSIDPVTGQIRTKVVFDREI 2458
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQY-SLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL N I V + NDN+P F +++Y S SI E+VPVG V V A+D D + +
Sbjct: 1833 PLKSITNVIIQVINVNDNSPEFSMAEYRSKSIMENVPVGHTVMKVEATDCDCSQTCECAG 1892
Query: 145 NELEPN-GLFSSDLRVEWV-----INRSVD 168
L + FS R++ V I RS+D
Sbjct: 1893 GLLVYSMDKFSDTFRIDHVTGEIKIIRSLD 1922
>gi|74150045|dbj|BAE24345.1| unnamed protein product [Mus musculus]
Length = 792
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P P GT I+V D NDN P FP Y + PE+ P+G VV V+ D D
Sbjct: 213 TALDGGSP-PRSGTATIHILVLDINDNAPQFPQELYEIQAPENSPIGLVVIKVTGEDVDS 271
Query: 137 GVNSKLSWNELEPNGLFSSDLRVEWVIN 164
GVN+++S+ + S D+R + IN
Sbjct: 272 GVNAEISYTFFDA----SEDIRATFQIN 295
>gi|403304764|ref|XP_003942959.1| PREDICTED: cadherin-18-like [Saimiri boliviensis boliviensis]
Length = 567
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
EH+ V K G L G+ I + D NDN P FP Y L +PE VG+ V
Sbjct: 7 EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGK 66
Query: 129 VSASDADLGVNSKLSWNELEPNGL 152
+ A+DAD G N+ ++++ + +G+
Sbjct: 67 IKANDADTGSNADMTYSIINGDGM 90
>gi|395506139|ref|XP_003757393.1| PREDICTED: cadherin-22 [Sarcophilus harrisii]
Length = 763
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
+ N T + V L R + E + + ++ T G G L G+ TI++ D NDN P
Sbjct: 216 VDNKTGVIRTAVADLDRE-KQERYEVVIQATDMAG-QLGGLSGSTTVTIVITDVNDNPPR 273
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
FP Y SI E P+GT + V A D+D+G N+ +++ + G
Sbjct: 274 FPQKMYQFSIVETAPIGTAIGRVKAEDSDVGENTDMTYQLKDEGG 318
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D ND+ P F Y S+ E P+GT V V ASDAD G +++L ++ L+
Sbjct: 153 IKVQDINDSEPRFLQGPYIGSVAELSPIGTSVMQVMASDADDPTYGSSARLVYSVLDGEQ 212
Query: 152 LFSSD 156
F+ D
Sbjct: 213 HFTVD 217
>gi|358413194|ref|XP_003582494.1| PREDICTED: protocadherin gamma-A7-like [Bos taurus]
gi|359067562|ref|XP_003586354.1| PREDICTED: protocadherin gamma-A7-like [Bos taurus]
Length = 834
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++ L EE H L + T G +P P GT + D ND+ PIF + QY +++P
Sbjct: 196 LEQVLDREEVATHHLLL--TASDGGDP-PRSGTARVQVTAVDVNDHAPIFSLPQYQVTVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VPVGT + +SA D D GVN +++++
Sbjct: 253 ENVPVGTRLLTISAIDLDEGVNGEVTYS 280
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P PL T + T+ V D NDN P F S Y + +PE+ P GT + V+A D D N+
Sbjct: 427 GGSP-PLSTTTHITMNVADTNDNPPAFLHSSYFVYVPENNPRGTSIFSVTAHDPDSNENA 485
Query: 141 KLSWN 145
+++++
Sbjct: 486 RVTYS 490
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E G PG + I + D NDN P V+ S SIPED P GTVV
Sbjct: 311 ESGYYEMEVQAQDG--PGSMT-RAKVLITILDVNDNAPEVTVTSVSSSIPEDTPPGTVVA 367
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
+ D D G N +++ S DL + + RS+D +
Sbjct: 368 LFYLQDRDSGKNGQVTCT-------ISEDL--PFKLERSIDNY 401
>gi|326673383|ref|XP_002664329.2| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
+ P R Y + K R ++ + + T G P P GT + V D NDN P+
Sbjct: 195 LTRPNGRKYGELVLNKELDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPV 253
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 254 FSQAVYKVSLPENSPVDTVVVTVSATDADEGQNGEVTY 291
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 420 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 475
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 476 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 508
>gi|149732826|ref|XP_001501105.1| PREDICTED: cadherin-18-like [Equus caballus]
Length = 790
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 313
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|410949761|ref|XP_003981586.1| PREDICTED: cadherin-18 isoform 2 [Felis catus]
Length = 574
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGI 313
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|291395171|ref|XP_002714124.1| PREDICTED: cadherin 18, type 2 [Oryctolagus cuniculus]
Length = 790
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 313
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 57 NVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
N GT+K R E W + + NPG L+ I V D NDN P +Y
Sbjct: 436 NTGTIKTTKVLDREETPWYNITVAASENDNPG-LLSHVTVGIRVLDVNDNPPEL-AREYD 493
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+ + E+ G V+ +SA+D D
Sbjct: 494 IVVCENAKPGQVIHTISATDKD 515
>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
Length = 798
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I + D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEILDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+++ D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|71534015|gb|AAH99958.1| Pcdhb18 protein [Mus musculus]
Length = 615
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P P GT I+V D NDN P FP Y + PE+ P+G VV V+ D D
Sbjct: 213 TALDGGSP-PRSGTATIHILVLDINDNAPQFPQELYEIQAPENSPIGLVVIKVTGEDVDS 271
Query: 137 GVNSKLSWNELEPNGLFSSDLRVEWVIN 164
GVN+++S++ + S D+R + IN
Sbjct: 272 GVNAEISYSFFDA----SEDIRATFQIN 295
>gi|344265590|ref|XP_003404866.1| PREDICTED: protocadherin gamma-B6-like [Loxodonta africana]
Length = 871
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
+L R + H + T G +P P T N I V D NDN+P+F +Y +S+ E+
Sbjct: 199 SLDREKQRSHHLIL---TASDGGDP-PRSATANIEIFVRDTNDNHPVFSKDEYRISLSEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+P GT V VSA+D D G+N+++S+
Sbjct: 255 LPPGTSVFRVSATDQDEGINAEISY 279
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 47 IANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
I + +T YK V G L R +T E+ + + T KG PL + + T+ + D NDN
Sbjct: 394 IHSSSTNYYKLVTDGILDRE-QTPEYNITITATD-KGK--PPLSYSTSVTLHITDVNDNA 449
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P+F + Y + +PE+ P G + VSASD D+G N ++S+ ++LEP L S
Sbjct: 450 PVFHQASYVVHVPENNPPGASITHVSASDLDMGTNGQVSYSIVASDLEPRALSS 503
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++VED ND+ P F L I E V +G + + A+D D+ NS + ++ PN FS
Sbjct: 121 VVVEDINDHAPQFDKKDIRLEIFESVSIGARISLDPATDPDISTNSVKDY-QINPNPYFS 179
Query: 155 SDLRV--------EWVINRSVDQHTNK 173
+RV E + +S+D+ +
Sbjct: 180 LLVRVNSDGGKYPELSLEKSLDREKQR 206
>gi|224045771|ref|XP_002195575.1| PREDICTED: cadherin-18-like [Taeniopygia guttata]
Length = 790
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y L +PE VG+ V + A+DAD G N+ + + + NG
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMKYTIINGNG 312
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|194219791|ref|XP_001917796.1| PREDICTED: protocadherin gamma-A10 [Equus caballus]
Length = 860
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRALRTEEHWLK-VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL EE L + T G +P GT + V D NDN P+F + +Y +S+PE+
Sbjct: 196 LERALDREEEALHHLVLTASDGGDP-LRSGTVLIIVTVFDTNDNAPVFTLPEYRVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 255 LPVGTQLLTVTATDRDEGANGEVTYS 280
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+L KN G +K + + + + + G + T I VED NDN+P ++
Sbjct: 293 QLNKNTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITSL 352
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ ED P+GTV+ +++ D D G N +++ +
Sbjct: 353 FSPLMEDSPLGTVIALLNVHDLDSGQNGQVTCS 385
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P F + I E+V G + A D D+GVNS S+ +L PN F+
Sbjct: 123 VTDINDNAPKFQAENLDVKINENVAPGMRFPLPEAVDPDVGVNSLQSY-QLSPNKHFTLA 181
Query: 157 LRV--------EWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 182 IQSRANGVKYPELVLERALDRE 203
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 63 RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL E+ + T G +P PL + T+ V D NDN P F Y IPE+ P
Sbjct: 408 RALDREQVSSYNITVTATDGGSP-PLSTGIHFTLQVADINDNPPTFSDISYFTYIPENNP 466
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELE 148
G V V+A D D N+++ ++ E
Sbjct: 467 RGASVFSVTALDPDSKENARVIYSLAE 493
>gi|116003895|ref|NP_001070305.1| cadherin-18 precursor [Bos taurus]
gi|122132281|sp|Q08DJ5.1|CAD18_BOVIN RecName: Full=Cadherin-18; Flags: Precursor
gi|115304961|gb|AAI23715.1| Cadherin 18, type 2 [Bos taurus]
gi|296475698|tpg|DAA17813.1| TPA: cadherin-18 precursor [Bos taurus]
Length = 790
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 313
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|402872887|ref|XP_003900325.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B7-like [Papio
anubis]
Length = 1804
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 1073 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 1128
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT + V A+D D G+NS+++++ L
Sbjct: 1129 VPPGTSILRVKATDQDEGINSEITYSFL 1156
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+ AL R EE + T G +P GT ++ V D NDN P+F + +Y +S+PE+
Sbjct: 200 LEHALDREEEAIHHLVLTASDGGDP-LRSGTVLVSVTVFDTNDNAPVFTLPEYRVSVPEN 258
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 259 LPVGTQLLTVTATDRDEGANGEVTYS 284
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 1305 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 1364
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 1365 ------LVASDL 1370
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E G G + T I VED NDN+P ++ + ED P+GTVV
Sbjct: 315 ETGFYEIEIQAEDG---GAYLATAKVLITVEDVNDNSPEVAITSLFSPVTEDSPLGTVVA 371
Query: 128 VVSASDADLGVNSKLSWNELE--PNGLFSS-DLRVEWVINRSVDQH 170
++ D D N +++ + L P L S D VI+R++D+
Sbjct: 372 FLNVHDLDSEQNGRVTCSILAYLPFKLEKSIDSYYRLVIHRALDRE 417
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 995 VVIEDVNDHAPQFQKDEINLEISESVSPGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 1053
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F + I E+V G + A D D+GVNS S+ +L PN FS
Sbjct: 125 IEVTDINDNAPKFQAENLDVKINENVATGMRFPLPEAIDPDVGVNSLQSY-QLSPNRHFS 183
Query: 155 SDLRVEWVIN 164
LRV+ N
Sbjct: 184 --LRVQSRAN 191
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C I V D+NDN+P ++ I ED P G VV
Sbjct: 1187 ERYTMNIE-AKDRGS----LSTRCKVIIEVLDENDNSPEIIITSLPDQIMEDSPPGVVVA 1241
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 1242 LFKTRDRDSGENGEV 1256
>gi|395833104|ref|XP_003789585.1| PREDICTED: cadherin-18-like [Otolemur garnettii]
Length = 790
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 215 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ + +G+
Sbjct: 275 LYVPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGV 313
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 57 NVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
N GT+K R E W + + NPG L+ I V D NDN P +Y
Sbjct: 436 NTGTIKTTKVLDREETPWYNITVAASENDNPG-LLSHVTVGIRVLDVNDNPPEL-AKEYD 493
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+ + E+ G V+ +SA+D D
Sbjct: 494 IVVCENSKPGQVIHTISATDKD 515
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2348 AHDGPHEGHANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGH 2407
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2408 ISYHLASPAEGFSVD 2422
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1805 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1863
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++++
Sbjct: 1864 DAPAGTLLLQLQAHDPDAGANGRVTY 1889
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2578 PRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2637
Query: 144 WNELEPNGLFSSD 156
+ +P+GLF D
Sbjct: 2638 LSSGDPSGLFELD 2650
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P+FP+S S S+ E+ P GT+V + A D D G +L + LE
Sbjct: 2690 TIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYTLLE 2744
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R+L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1590 RLHSGTGALSVVRSLDREQRAEHLLTVVASDH-GSPPRS--ATQLLTVSVADVNDEAPAF 1646
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1647 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1683
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D G+NS
Sbjct: 865 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDAGINS 924
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 925 RVTFTLLAGGG 935
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 518 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 573
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 574 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 613
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1702 TLRALDREEQEEINLTVYARDRGSP-PLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1760
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ V+ ASD D+G N +L + L + +G F DL
Sbjct: 1761 QDPQTLT-VLRASDPDVGANGQLQYRILDGDSSGAFVLDL 1799
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2254 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2309
Query: 147 LEPNG 151
L P+G
Sbjct: 2310 LSPSG 2314
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + IPED P G V V A D DLG +++S+
Sbjct: 1533 VTDENDNAPVF-ASPSRVRIPEDQPPGPVALHVVARDPDLGEAARVSY 1579
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2469 LQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2507
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1931 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLRAEDRDA 1990
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1991 GANASI 1996
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 119 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 170
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1063 ELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1122
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
V A+D D G N +L+++ L P S R+
Sbjct: 1123 RVFATDRDSGPNGRLTYS-LRPLSEDSKAFRI 1153
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +L++
Sbjct: 660 GGLKSMVYVKVFVSDENDNPPQFYPWEYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLTY 719
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 720 HILAGNNPPLFALDEHSGLLTVAWPLARRAN 750
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1151 FRIHPQTGEMTTLQTLDRE-RQSSYQLLVQ-VQDGGSPPRSTTGTVH--IAVLDLNDNSP 1206
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1207 SFLQASGAAGGGLPVQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1262
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 208 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 263
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 264 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 305
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V +V A + + S L+ + +P GLFS D
Sbjct: 785 PVFEQLQYVFSVPEDVAPGTSVGIVQARNPPGRLGSVTLALSGGDPRGLFSLD 837
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPN 150
T+ ++D NDN P F QY +PE P+ + V A D D G + ++S++
Sbjct: 2155 TLTLQDANDNAPRFVRPQYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPAR 2214
Query: 151 GLFSSD 156
GLF D
Sbjct: 2215 GLFHVD 2220
>gi|221040610|dbj|BAH11982.1| unnamed protein product [Homo sapiens]
Length = 754
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 45 KFIANP---TTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
KF+ P T VG ++ AL +E + + K G G L GT I
Sbjct: 159 KFLDGPYVATVPEMSPVGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNIT 218
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ D NDN P FP S + L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 219 LTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 273
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 287 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 345
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 346 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 374
>gi|402884599|ref|XP_003905765.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Papio anubis]
Length = 1085
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NPGPL T I VED+NDN P F Y + +PEDV + T V V A+D D G N+
Sbjct: 333 GRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLRVQATDRDQGQNA 392
Query: 141 KLSWNELEPN 150
+ ++ L N
Sbjct: 393 AIHYSILSGN 402
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T + I V D N + P+F S Y++S+ ED PVGT + +SA+D D G N+++++ +P
Sbjct: 672 TAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDP 731
Query: 150 NGLFSSD 156
F D
Sbjct: 732 VPQFRID 738
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+GS P PL + + + D NDN P+F + L + E+ PVG+VV + A+D D G N
Sbjct: 873 RGS-PTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPN 931
Query: 140 SKLSWNELEPN-------GLFSSDLRV 159
+++ + +E + L + DLR
Sbjct: 932 AQIMYQIVEGDMRHFFQLDLLNGDLRA 958
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 79 HKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G P PL+ + ++ V D NDN PIF S + ++ E+VP+G V + A DAD G
Sbjct: 437 QDGGRP-PLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSG 495
Query: 138 VNSKLSWNELEPNGLF 153
N++L + ++ F
Sbjct: 496 ENARLHYRLVDTASAF 511
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T I++ D NDN P F Y SI ED P T + VSA+D D G N +L +
Sbjct: 775 TTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLY 829
>gi|397517966|ref|XP_003829174.1| PREDICTED: protocadherin gamma-A7 [Pan paniscus]
Length = 817
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHLVLTASDGGDP-PRSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 225 TAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ I E+ P G + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGEISTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|395546174|ref|XP_003774966.1| PREDICTED: protocadherin-19 [Sarcophilus harrisii]
Length = 968
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P P +GT I V D NDNNP+FP YS+S+PE+ P+ T V ++ASD D
Sbjct: 201 TALDGGDP-PRMGTVGLAIKVIDSNDNNPVFPEPTYSVSVPENAPLNTPVLRLNASDPDE 259
Query: 137 GVNSKLSW------NELEPNGLFSSD 156
G N ++ + NE + GLF D
Sbjct: 260 GTNGEVVYSFYGFVNE-KARGLFQID 284
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
C + ++D NDN P FP SQ L I E GT + + A D D G ++ E+ PN
Sbjct: 105 CVVKVEIKDLNDNTPSFPSSQIELEISETASPGTRIPLDGAYDPDSGSFGVQTY-EITPN 163
Query: 151 GLFSSDLR--------VEWVINRSVDQHTN 172
LF +++ E V+ +++D+ T
Sbjct: 164 DLFGLEVKTRGDGSRFAELVVEKNLDRETQ 193
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R +++ L ++ G P L T + T+ + D+NDN+P F + Y + + E
Sbjct: 401 GRLDREQR-DQYNLTIQ--ARDGGVPS-LQSTKSFTVKITDENDNHPHFSKAYYQVIVQE 456
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
+ G + VSA D DLG+N +S+
Sbjct: 457 NNTPGAYLLSVSARDPDLGLNGSVSYQ 483
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 64 ALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI---FPVSQYSLSIPEDV 120
A+ E+ + + + K P + C T+ V D NDN P+ V+ + + E
Sbjct: 295 AIDYEQGRVYELDVQAKDLGPNSIPAHCKVTVNVLDVNDNAPVINLLSVNSELVEVSESA 354
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
P G V+ +V SD D G+N ++ L
Sbjct: 355 PPGYVIALVRVSDRDSGLNGRVQCRLL 381
>gi|348555722|ref|XP_003463672.1| PREDICTED: cadherin-9 [Cavia porcellus]
Length = 789
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GVIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYH 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP GT + + ASD D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPPGTHLGRIKASDPDMGTNAEVQYSIAEGDG 312
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVP 121
+ L EE L + K G V + II + D NDN P F Y+ S+PE
Sbjct: 114 KKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASVPEMSG 173
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 174 VGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|296485270|tpg|DAA27385.1| TPA: protocadherin gamma subfamily B, 5-like [Bos taurus]
Length = 815
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ + ++ T G +P PL GT I V D NDN P+F Y +++ E+VP GT
Sbjct: 202 REQQSYHRLVLTASDGGDP-PLSGTTELQIQVTDANDNPPVFTQDVYRVNLGENVPPGTT 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D G+NS+++++
Sbjct: 261 VLQVSATDQDEGINSEIAYS 280
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ED ND+ P F + + L I E P GT + A DAD+G+NS ++
Sbjct: 123 IEDVNDHTPKFSQNSFELQISESTPPGTRFILEVAEDADIGLNSLQTY 170
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
GTL R E + V K K PL + T+ V D NDN P F + YS+ +P
Sbjct: 403 AGTLDREQIPEYNVTIVATDKGKP----PLCTHTSVTLHVVDINDNPPSFSQTSYSVYLP 458
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ GT + V+A D D N+++ ++
Sbjct: 459 ENNLRGTSIFSVTAHDPDSNENARVIYS 486
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G + G LV C I ++D+NDN P I E+ GT++ ++ D D G N
Sbjct: 316 EGRDGGGLVAQCTVEISIQDENDNRPDITFHSLVEMILENAVPGTLIALIKIHDRDSGEN 375
Query: 140 SKL 142
++
Sbjct: 376 GEV 378
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T+ VED NDN P F S Y +++ E P G+ + VSA+D D G N
Sbjct: 2324 AHDGPHEGRANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGH 2383
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2384 ISYHLASPAEGFSVD 2398
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2554 PRSSAVPVTVTVLDVNDNPPVFSRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2613
Query: 144 WNELEPNGLFSSD 156
+ +P+GLF D
Sbjct: 2614 LSSGDPSGLFELD 2626
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT + R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1781 GTTRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1839
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D N ++++
Sbjct: 1840 DAPAGTLLLQLQAHDPDAEANGRVTY 1865
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P+FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2666 TIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2720
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R+L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1566 RLHSSTGALSVVRSLDREQRAEHILTVVASDH-GSPPRS--ATQLLTVSVADVNDEAPAF 1622
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1623 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTY 1659
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 865 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDAGVNS 924
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 925 RVTFTLLAGGG 935
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P PL+ + VED+ND+ P F + SL +PE
Sbjct: 1678 TLRALDREEQEEINLTVYARDRGSP-PLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1736
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ V+ ASD D+G N +L + L +P+G F DL
Sbjct: 1737 QDPQTLT-VLRASDPDVGANGQLQYLILDGDPSGAFVLDL 1775
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P L + ++ ++D NDN P
Sbjct: 518 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLPA-LASSATVSVALQDVNDNEP 573
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 574 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 613
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
L VE T + + + V D+NDN P+F S + IPED P G V V A
Sbjct: 1484 LLVEATDRPANASHRRAARVSARVFVTDENDNAPVF-ASPSRVRIPEDQPPGPVALHVVA 1542
Query: 132 SDADLGVNSKLSW 144
D DLG +++S+
Sbjct: 1543 RDPDLGEAARVSY 1555
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2230 LVGSATLTVMVIDTNDNRPTIP-QPWELQVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2285
Query: 147 LEPNG 151
L P+G
Sbjct: 2286 LSPSG 2290
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2445 LQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDAD 2483
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1907 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLRAEDRDA 1966
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1967 GANASI 1972
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 660 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSMPGTAVLRVRAHDPDQGPHGRLSY 719
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 720 HILAGNNPPLFALDEHSGLLTVAWPLARRAN 750
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 119 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 170
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1063 ELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1122
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRV 159
V A+D D G N +L+++ L P S+ R+
Sbjct: 1123 RVFATDRDSGPNGRLTYS-LRPLSEDSNAFRI 1153
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1151 FRIHPQTGEMTTLQTLDRE-RQSSYQLLVQ-VQDGGSPPRSTTGTVH--IAVLDLNDNSP 1206
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1207 SFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1262
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R++ + L++E + G +P P + + D ND+ P F S+Y + E
Sbjct: 208 GELDRENRSQ-YMLQLE--AYDGGSP-PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 263
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 264 SLAPGSPVLQVYASDADAGPNGAVTYEINRRQSEGDGPFSID 305
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V +V A + + S L+ + +P GLFS D
Sbjct: 785 PVFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLGSVTLALSGGDPRGLFSLD 837
>gi|62087496|dbj|BAD92195.1| protocadherin gamma subfamily A, 7 isoform 1 precursor variant
[Homo sapiens]
Length = 895
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 131 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHLVFTASDGGDP-PRSS 187
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 188 TAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 243
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 356 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 415
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ I E+ P G + +V+A D D N++++++ E
Sbjct: 416 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 456
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 260 LTGEISTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 316
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 317 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 347
>gi|348514365|ref|XP_003444711.1| PREDICTED: protocadherin beta-15-like [Oreochromis niloticus]
Length = 1311
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R E+ ++ T G NP GT +IV D NDN P+F + Y S+PE+ P
Sbjct: 195 KELDREEQREFRLLLTALDGGNP-KRSGTTTVHVIVLDANDNAPVFSQAVYKASLPENSP 253
Query: 122 VGTVVQVVSASDADLGVNSKLSW 144
+ TVV V+A+DAD G+N K+++
Sbjct: 254 LYTVVVKVAATDADEGLNGKVTY 276
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R +EH L T G NP G+ + V D NDN P+F + Y ++PE+
Sbjct: 698 KELDREKEHDLNFILTAVDGGNP-QRSGSAVIHVTVLDANDNAPVFDQAVYKANLPENSN 756
Query: 122 VGTVVQVVSASDADLGVNSKLSW 144
+ T+V +VSASDAD GVN ++S+
Sbjct: 757 LNTLVVIVSASDADEGVNGEVSY 779
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ V D NDN P+F + Y SIPE+ P+ TVV VSA+DAD GVN ++S++
Sbjct: 988 VTVLDANDNAPVFSQAVYKASIPENSPLNTVVVRVSATDADEGVNGEVSYD 1038
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++++ D NDN+P+FP L I E G +V A DAD+G N+ ++ L+ N F
Sbjct: 620 SLLILDVNDNSPVFPKDTVKLEIRESAVKGARYRVNEAHDADIGQNAVKQYS-LQKNDHF 678
Query: 154 SSDLR--------VEWVINRSVDQH 170
+R +E V+++ +D+
Sbjct: 679 VLSVREDVDGTKSIELVLDKELDRE 703
>gi|431907186|gb|ELK11252.1| Cadherin-24 [Pteropus alecto]
Length = 679
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|158284496|ref|XP_307203.4| AGAP011529-PA [Anopheles gambiae str. PEST]
gi|157020990|gb|EAA03233.5| AGAP011529-PA [Anopheles gambiae str. PEST]
Length = 652
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGP-LVGTCNTTIIVEDQNDNN 104
F +P T + V L R R E + LK+ T G P L + V+D NDN
Sbjct: 480 FRVDPETGVLTVVAPLDRE-RQEVYELKIRATDGGGDQNTPALYSDALVRVTVDDINDNA 538
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P F V ++ I EDVP GTVV VVSA D D G +S++ ++ E NG R++
Sbjct: 539 PEFAVQDLTVRIREDVPRGTVVTVVSAIDLDSGTSSEIVYSFGE-NGDGEGSFRID 593
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 83 NPGPL-VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
NPG + I V+D NDN+PIF + ++ + E+ P GT V V+A D DLG N+
Sbjct: 298 NPGTRKQSSAKVKINVQDTNDNDPIFETANLTIYVDENEPAGTSVTKVTARDKDLGENAY 357
Query: 142 LSWN 145
+S++
Sbjct: 358 ISYS 361
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D+NDN P F S S + E+ GT++ V A+DADLG N+K++++
Sbjct: 426 DENDNVPKFEKSLASFRVTENAINGTIIFRVKATDADLGQNAKITYS 472
>gi|440902411|gb|ELR53208.1| Protocadherin gamma-A7, partial [Bos grunniens mutus]
Length = 793
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++ L EE H L + T G +P P GT + D ND+ PIF + QY +++P
Sbjct: 183 LEQVLDREEVATHHLLL--TASDGGDP-PRSGTARVQVTAVDVNDHAPIFSLPQYQVTVP 239
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VPVGT + +SA D D GVN +++++
Sbjct: 240 ENVPVGTRLLTISAIDLDEGVNGEVTYS 267
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E G PG + I + D NDN P V+ S SIPED P GTVV
Sbjct: 298 ESGYYEMEVQAQDG--PGSMT-RAKVLITILDVNDNAPEVTVTSVSSSIPEDTPPGTVVA 354
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQH 170
+ D D G N +++ S DL + + RS+D +
Sbjct: 355 LFYLQDRDSGKNGQVTCT-------ISEDL--PFKLERSIDNY 388
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P PL T + + V D NDN P F S Y + +PE+ P GT + V+A D D N+
Sbjct: 414 GGSP-PLSTTTHIAMNVADTNDNPPAFLQSSYFVYVPENNPRGTSIFSVTAHDPDSNENA 472
Query: 141 KLSWN 145
+++++
Sbjct: 473 RVTYS 477
>gi|345320248|ref|XP_001517550.2| PREDICTED: protocadherin gamma-A7-like, partial [Ornithorhynchus
anatinus]
Length = 585
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G +P L GT + V D NDN P+F S Y + + ED
Sbjct: 101 LERALDREEEAVYHLILTASDGGDPV-LSGTARVRVTVVDVNDNAPVFTQSVYQVRVRED 159
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP+GT V V+A+D D GVN ++++
Sbjct: 160 VPMGTRVVTVNATDPDEGVNGHVTYS 185
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 40 TFSIAKFIANPTTRLYK------NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNT 93
T+S K I + T+R++ V L E + ++E G G L
Sbjct: 183 TYSFRK-ITDKTSRIFHLNSTTGEVSILANLDFEESEFYEMEIQSRDG---GGLQARAKV 238
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL- 152
+ V D NDN P ++ + S+PED P GTV+ +++ D D G N ++ + P+ L
Sbjct: 239 LVTVGDVNDNTPDVTITSLTSSVPEDSPPGTVIALLNVHDRDSGDNGLVTCS--IPDSLP 296
Query: 153 ----FSSDLRVEWVINRSVDQH 170
S D + V +RS+D+
Sbjct: 297 FKLEKSIDSYLRLVTDRSLDRE 318
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P F YSL IPE+ P G V V+A D D N++++++
Sbjct: 336 PLSAQTHIFLHVIDTNDNPPAFEQKAYSLYIPENNPRGASVFRVTARDPDSEENARVTYS 395
Query: 146 ELEPNG 151
E G
Sbjct: 396 ISEKPG 401
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + + I E+ G + A D D+GVNS ++ +L PN FS D
Sbjct: 28 ITDVNDNPPRFREEELEIKINENAAPGIRFPLPEAHDPDMGVNSLQNY-QLSPNRHFSLD 86
Query: 157 LR--------VEWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 87 VQSGADGTKNAELVLERALDRE 108
>gi|403256586|ref|XP_003920950.1| PREDICTED: protocadherin gamma-A2 [Saimiri boliviensis boliviensis]
Length = 693
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G +P L GT + V D NDN P+F +Y +S+PE+
Sbjct: 196 LERALDREEEAVHHLVLVASDGGDP-VLSGTSRICVKVLDVNDNAPVFTQPEYRVSVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PV T++ V+A+DAD G N+++++
Sbjct: 255 TPVDTLILTVTATDADEGYNAQVAY 279
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G N+ L L PN FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKSAHDADVGENA-LRKYALHPNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSGVDGNKYPELVLERALDRE 203
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F + K + N Y + T K R + + + T NP L + + V D
Sbjct: 392 FKLEKSVDN-----YYRLVTTKALDREQFSFYNITLTAKDEGNPS-LSTDAHILLQVADI 445
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
NDN P F + YS IPE+ P G + V+A D D N+ ++++ +E
Sbjct: 446 NDNAPAFSRTSYSAYIPENNPRGASIFSVTAHDPDSNNNAHVTYSFME 493
>gi|194382270|dbj|BAG58890.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNPPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG +V VSA+D D GVN ++S++
Sbjct: 256 SPVGFLVVKVSATDVDTGVNGEISYS 281
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L+ N T+++ D NDN P F + Y+L + E+ ++ VSA+D D G N++++++
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 147 LEPN 150
L P
Sbjct: 491 LPPQ 494
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGKISCS 385
>gi|449274104|gb|EMC83387.1| Cadherin-22 [Columba livia]
Length = 792
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L G+ TI++ D NDN P FP Y SI E PVGT + V A D+D+G N+ +++
Sbjct: 234 GGLSGSTTVTIVITDVNDNPPRFPQKMYQFSIVETAPVGTAIGRVKAEDSDVGENTDMTY 293
Query: 145 NELEPNGL 152
+ G+
Sbjct: 294 QVKDEEGV 301
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D ND+ P F Y S+ E PVGT V V ASDAD G ++++ ++ LE
Sbjct: 135 IKVQDINDSEPRFLEGPYIGSVAELSPVGTSVMQVMASDADDPTYGSSARVVYSVLEGEQ 194
Query: 152 LFSSD 156
F+ D
Sbjct: 195 HFTVD 199
>gi|127138905|ref|NP_001076025.1| protocadherin gamma-A7 precursor [Pan troglodytes]
gi|62510866|sp|Q5DRB3.1|PCDG7_PANTR RecName: Full=Protocadherin gamma-A7; Short=PCDH-gamma-A7; Flags:
Precursor
Length = 932
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHLVLTASDGGDP-PRSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 225 TAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ I E+ P G + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGEISTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVT 383
>gi|157128508|ref|XP_001661461.1| cadherin [Aedes aegypti]
gi|108872550|gb|EAT36775.1| AAEL011166-PA, partial [Aedes aegypti]
Length = 1088
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGP-LVGTCNTTIIVEDQNDNN 104
F +P T + + L R R E + L++ T G+ P L + V+D NDN
Sbjct: 865 FRVDPETGVLSVIAPLDRE-RQEVYELRIRATDGGGNQDTPALYSEALVRVTVDDINDNA 923
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P F V ++ I EDVP GTVV VVSA D D G NS++ ++ E NG R++
Sbjct: 924 PEFSVQDLNVRIREDVPKGTVVTVVSAIDLDSGPNSEIMYSFGE-NGDGEGSFRID 978
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P K +G L R R +E+ L + T + P V I V D+NDN P
Sbjct: 762 FRLDPDNGELKIIGYLDRE-RRDEYLLNI--TVYDLGKPQKSVSKV-LPITVLDENDNVP 817
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
F S S + E+ GT++ V+A+DADLG+N+K++++ + F D
Sbjct: 818 KFEKSLASFRVTENALNGTIIFRVNATDADLGINAKVTYSMITDTKDFRVD 868
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
+K TK +G + L + V D ND +P+F ++YS++I ED P+ + V A
Sbjct: 90 VKATATKREGKSRISLEADTVIDVKVLDTNDLSPLFYPTEYSVTISEDTPLHKSILRVIA 149
Query: 132 SDADLGVNSKLSWNELEPNGLFS 154
DADLG+N ++ ++ L+ F+
Sbjct: 150 EDADLGLNGEIYYSILDETEQFA 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I V+D NDN+PIF + ++ + E+ P GT V V+A D DLG N+ +S++
Sbjct: 431 SAKVKINVQDTNDNDPIFETNNMTIWVDENEPAGTTVTKVTARDKDLGENAYISYS 486
>gi|119514223|gb|ABL75886.1| protocadherin 2G11 [Takifugu rubripes]
Length = 940
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K R ++H L ++ T G +P GT + V D NDN P+F + Y S+PE+ P
Sbjct: 192 KELDREKQHELNLQLTALDGGSPQ-RSGTVVIHVTVLDANDNAPVFSQAVYKASLPENSP 250
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQ 169
+ TVV VSA+DAD GVN +++ G S D++ + I++ Q
Sbjct: 251 LDTVVMQVSATDADEGVNGDVTYE----FGHVSEDVKNVFSIDKKSGQ 294
>gi|432858179|ref|XP_004068831.1| PREDICTED: cadherin-22-like [Oryzias latipes]
Length = 803
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V L R T++ + V G L G+ TI++ D NDN P FP Y S+
Sbjct: 222 VADLDR--ETQDRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMYQFSVS 279
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
E VGT V V A+DAD+G N+ +S+ E LF VE
Sbjct: 280 EGAAVGTPVGRVIATDADMGENTDMSYLIREGGELFKVTTDVE 322
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L ++ +R R E+ + + PL I V+D ND+ P F Y
Sbjct: 107 LTGDIHATERLDREEKAFYTLRAQARDRLTDDPLEPESEFVIKVQDINDSEPQFLEGPYI 166
Query: 114 LSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLRVEWVINRSVD 168
S+ E P+GT V V+ASDAD G ++++ ++ L+ F+ D ++ D
Sbjct: 167 GSVAELSPIGTSVMKVTASDADDPTYGSSARVVYSVLDGERFFTVDRHTGIIMTAVAD 224
>gi|71680797|gb|AAI00673.1| Protocadherin beta 9 [Homo sapiens]
gi|85662612|gb|AAI05637.1| Protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNVPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
PVG+++ VSA DAD GVN+++S++ + S D+ + IN
Sbjct: 255 SPVGSLIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQIN 295
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|119631153|gb|EAX10748.1| cadherin 9, type 2 (T1-cadherin), isoform CRA_c [Homo sapiens]
Length = 394
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
Length = 3463
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|410334089|gb|JAA35991.1| dachsous 1 [Pan troglodytes]
Length = 3298
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2351 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2410
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2411 ISYHLASPADGFSVD 2425
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1808 GTMRPLDREVEPAFQLRIEAWDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1866
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1867 DVPAGTLLLQLQAHDPDAGANGHVTY 1892
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2596 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2653
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 868 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 927
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 928 RVTFTLLAGGG 938
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1593 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1649
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1650 QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY 1686
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T V T RAL EE + + P + + VED+N
Sbjct: 1690 SSESFSLDPDT----GVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDEN 1745
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1746 DHAPTFGSAHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1802
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2693 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2747
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + ++ ++D NDN P
Sbjct: 521 FSIDPTSGIITTAASLDYELEPQPQLTVVAT---DGGLP-PLASSATVSVALQDVNDNEP 576
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 577 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 616
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 663 GGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 722
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 723 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 753
Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2472 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2510
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2257 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2312
Query: 147 LEPNG 151
L P+G
Sbjct: 2313 LSPSG 2317
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1934 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 1993
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1994 GANASI 1999
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 211 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 266
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD GVN +++ + E +G FS D
Sbjct: 267 SLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSID 308
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1154 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1209
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1210 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1265
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1536 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1582
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1066 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1125
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1126 RVFATDRDSGPNGRLTYS 1143
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 788 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 840
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+E ++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2325 ETKERFVLMITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V +V+ASDAD N+ +S+ + N F+
Sbjct: 2383 VLLVNASDADASTNAVISYRIIGGNSQFT 2411
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGT----CNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ PG V T + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPGAAVQTRSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V +SA+D D G+N+ L ++ + NGL
Sbjct: 474 VFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGL 520
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 1889 FFLNPITGVFN----LTRLLDYEVQQYYILTVRAE--DGGGQFTTIRVYFNILDVNDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E++PVG+ V V + +DAD G+NS+L+++
Sbjct: 1943 IFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYS 1982
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1294 PLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYS 1353
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T++++ V GS P PL + + + V D NDN
Sbjct: 2408 SQFTINPSTGQIITSALLDR--ETKDNYTLVVVCSDAGS-PEPLSSSTSVLVTVTDVNDN 2464
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G+ V V+ +DAD+G NS+L ++
Sbjct: 2465 PPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYS 2506
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3178 GYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3233
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GS P T +I++ D ND P+F +S YS+++PE++
Sbjct: 2221 KTPTYHLTVQATD-RGSTP--RTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPR 2277
Query: 124 TVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVINRSVDQHTNK 173
T++QVV A D D G NSKLS+ N F+ E + +S+D+ T +
Sbjct: 2278 TILQVV-ARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKE 2328
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 665 GSPPQSSMARINVSLL--DINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPLG 2094
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN+P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 983 TVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGN 1039
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++ K KG NP PL I V ++N + P F S S +IPE VG++V+
Sbjct: 3055 QNYFITVTAKDKG-NP-PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRT 3112
Query: 129 VSASDADLGVNS--KLSWNELEPNGLFS 154
VSA D D +N K S + G+F+
Sbjct: 3113 VSARDRDAAMNGLIKYSISSGNEEGIFA 3140
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
D NDNNPIF + Y + I E+ GT + V A+D D G N ++ + + NG + + R
Sbjct: 2146 DINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIV--NGNTNQEFR 2203
Query: 159 VEWV 162
++ V
Sbjct: 2204 IDSV 2207
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ YS+ I E
Sbjct: 3361 GILDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFTLNVYSVQISE 3417
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3418 GVPIGTHVTFVSAFDSD 3434
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F + Y L PE +G+ V V A+D D G N ++ +
Sbjct: 2857 STDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVAQVFATDPDEGSNGQVFY 2911
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSWN 145
L+ TI + D NDN P F S+Y + ++V VGT +++V + D D G+NS++ +
Sbjct: 2965 LISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYF 3024
Query: 146 ELEPN--GLFSSDLRVEWV 162
N G F D W+
Sbjct: 3025 ISNDNHLGKFKLDNDTGWI 3043
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIP 117
G L R L ++ V N + P V + + D ND P+F + Y +S+
Sbjct: 538 GGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 118 EDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + ++ A+D DLG N + S E E
Sbjct: 594 ENAPTGTELLMLRATDGDLGDNGTVRFSLQEAE 626
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
>gi|334325572|ref|XP_003340657.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-18-like [Monodelphis
domestica]
Length = 790
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ + + + +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMKYTIINGDGI 313
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N P I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PXEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|297295322|ref|XP_001088899.2| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 1721
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 1097 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 1152
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT + V A+D D G+NS+++++ L
Sbjct: 1153 VPPGTSILRVKATDQDEGINSEITYSFL 1180
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+ AL R EE + T G +P GT ++ V D NDN P+F + +Y +S+PE+
Sbjct: 200 LEHALDREEEAIHHLVLTASDGGDP-LRSGTVLVSVTVFDTNDNAPVFTLPEYRVSVPEN 258
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PVGT + V+A+D D G N +++++
Sbjct: 259 LPVGTQLLTVTATDRDEGANGEVTYS 284
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 1329 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 1388
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 1389 ------LVASDL 1394
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G + T I VED NDN+P ++ + ED P+GTVV +++ D D N
Sbjct: 324 QAEDGGAYLATAKVLITVEDVNDNSPEVAITSLFSPVTEDSPLGTVVALLNVHDLDSEQN 383
Query: 140 SKLSWNEL 147
+++ + L
Sbjct: 384 GRVTCSIL 391
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F + I E+V G + A D D+GVNS S+ +L PN FS
Sbjct: 125 IEVTDINDNAPKFQAENLDVKINENVATGMRFPLPEAIDPDVGVNSLQSY-QLSPNRHFS 183
Query: 155 SDLRVEWVIN 164
LRV+ N
Sbjct: 184 --LRVQSRAN 191
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 1019 VVIEDINDHAPQFQKDEINLEISESVSPGMGTILESAEDPDISMNS-LSKYQLSPNEHFS 1077
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C I V D+NDN+P ++ I ED P G VV
Sbjct: 1211 ERYTMNIE-AKDRGS----LSTRCKVIIEVLDENDNSPEIIITSLPDQIMEDSPPGVVVA 1265
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 1266 LFKTRDRDSGENGEV 1280
>gi|426367248|ref|XP_004050645.1| PREDICTED: protocadherin-16 [Gorilla gorilla gorilla]
Length = 3298
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2351 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2410
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2411 ISYHLASPADGFSVD 2425
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1808 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1866
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1867 DVPAGTLLLQLQAHDPDAGANGHVTY 1892
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2596 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2653
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 868 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 927
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 928 RVTFTLLAGGG 938
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L R EH L V + H GS P T T+ V D ND P F
Sbjct: 1593 RLHSSTGALSVVRPLDRERRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1649
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1650 QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY 1686
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2693 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2747
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 521 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 576
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 577 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 616
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P P + + VED+ND+ P F + SL +PE
Sbjct: 1705 TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1763
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1764 QDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1802
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 663 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 722
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 723 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 753
Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2472 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2510
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2257 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2312
Query: 147 LEPNG 151
L P+G
Sbjct: 2313 LSPSG 2317
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ P++ + L R R + V G+ GPL T + TI V D ND+ P
Sbjct: 1902 FLLEPSSGELRTAAALDRE-RCPSYTFSVSAVD--GAAAGPLSTTVSVTITVRDVNDHAP 1958
Query: 106 IFPVSQYSLSIPEDVPVGTV----VQVVSASDADLGVNSKL 142
FP S L +P P + + + A D D G N+ +
Sbjct: 1959 TFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDAGANASI 1999
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 211 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 266
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD GVN +++ + E +G FS D
Sbjct: 267 SLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSID 308
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1154 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1209
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1210 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1265
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 101 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 160
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 161 RYPLEPARDADAG 173
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1536 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1582
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1066 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1125
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1126 RVFATDRDSGPNGRLTYS 1143
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 788 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 840
>gi|16933557|ref|NP_003728.1| protocadherin-16 precursor [Homo sapiens]
gi|20139065|sp|Q96JQ0.1|PCD16_HUMAN RecName: Full=Protocadherin-16; AltName: Full=Cadherin-19; AltName:
Full=Cadherin-25; AltName: Full=Fibroblast cadherin-1;
AltName: Full=Protein dachsous homolog 1; Flags:
Precursor
gi|119589089|gb|EAW68683.1| dachsous 1 (Drosophila) [Homo sapiens]
gi|168275540|dbj|BAG10490.1| protocadherin-16 precursor [synthetic construct]
Length = 3298
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2351 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2410
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2411 ISYHLASPADGFSVD 2425
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1808 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1866
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1867 DVPAGTLLLQLQAHDPDAGANGHVTY 1892
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2596 NDNPPVFTRASYRVTVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2653
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 868 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 927
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 928 RVTFTLLAGGG 938
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2693 TIEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2747
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1593 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1649
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1650 QQQEYSVLLRENNPPGTSLLTLRATDPDVGANGQVTY 1686
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 521 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 576
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 577 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 616
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P P + + VED+ND+ P F + SL +PE
Sbjct: 1705 TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1763
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1764 QDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1802
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 663 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 722
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 723 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 753
Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2472 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2510
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2257 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2312
Query: 147 LEPNG 151
L P+G
Sbjct: 2313 LSPSG 2317
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1934 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 1993
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1994 GANASI 1999
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 211 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 266
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD GVN +++ + E +G FS D
Sbjct: 267 SLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSID 308
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1154 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1209
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1210 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1265
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 101 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 160
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 161 RYPLEPARDADAG 173
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1536 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1582
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1066 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1125
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1126 RVFATDRDSGPNGRLTYS 1143
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 788 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 840
>gi|73490260|dbj|BAB61903.2| KIAA1773 protein [Homo sapiens]
Length = 3434
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2487 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2546
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2547 ISYHLASPADGFSVD 2561
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1944 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 2002
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 2003 DVPAGTLLLQLQAHDPDAGANGHVTY 2028
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2732 NDNPPVFTRASYRVTVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2789
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 1004 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 1063
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 1064 RVTFTLLAGGG 1074
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2829 TIEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2883
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1729 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1785
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1786 QQQEYSVLLRENNPPGTSLLTLRATDPDVGANGQVTY 1822
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 657 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 712
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 713 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 752
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P P + + VED+ND+ P F + SL +PE
Sbjct: 1841 TLRALDREEQEEINLTVYAQDRGSP-PQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEG 1899
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1900 QDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1938
Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 799 GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 858
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 859 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 889
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2608 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2646
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2393 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2448
Query: 147 LEPNG 151
L P+G
Sbjct: 2449 LSPSG 2453
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 2070 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 2129
Query: 137 GVNSKL 142
G N+ +
Sbjct: 2130 GANASI 2135
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 347 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 402
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD GVN +++ + E +G FS D
Sbjct: 403 SLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSID 444
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1290 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1345
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1346 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1401
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L +PE GT
Sbjct: 237 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQVPEHTAFGT 296
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 297 RYPLEPARDADAG 309
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1672 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1718
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1202 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1261
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1262 RVFATDRDSGPNGRLTYS 1279
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 924 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 976
>gi|397496709|ref|XP_003819172.1| PREDICTED: protocadherin-16 [Pan paniscus]
Length = 3300
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2353 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2412
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2413 ISYHLASPADGFSVD 2427
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1810 GTMRPLDREVEPAFQLRIEAWDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1868
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1869 DVPAGTLLLQLQAHDPDAGANGHVTY 1894
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2598 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2655
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 988 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 1047
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 1048 RVTFTLLAGGG 1058
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1595 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1651
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1652 QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY 1688
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2695 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2749
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T V T RAL EE + + P + + VED+N
Sbjct: 1692 SSESFSLDPDT----GVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTIRVAVEDEN 1747
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1748 DHAPTFGSAHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1804
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + ++ ++D NDN P
Sbjct: 641 FSIDPTSGIITTAASLDYELEPQPQLTVVAT---DGGLP-PLASSATVSVALQDVNDNEP 696
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 697 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 736
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 783 GGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 842
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 843 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 873
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2474 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2512
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2259 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2314
Query: 147 LEPNG 151
L P+G
Sbjct: 2315 LSPSG 2319
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1936 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 1995
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1996 GANASI 2001
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 331 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 386
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD GVN +++ + E +G FS D
Sbjct: 387 SLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSID 428
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1274 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1329
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1330 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1385
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1186 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAMAENQPPGTSVG 1245
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1246 RVFATDRDSGPNGRLTYS 1263
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 908 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 960
>gi|432090244|gb|ELK23677.1| Protocadherin alpha-2 [Myotis davidii]
Length = 3484
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T+K L E+ L N +P PL G C + + D+NDN P V+ SL + ED
Sbjct: 2084 TVKGELDYEDCNLYEINIDAVDKSPFPLTGHCKVIVKLLDENDNTPEMAVTSLSLPVRED 2143
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+GTV+ ++S SD D G N +++
Sbjct: 2144 APLGTVIALISLSDRDSGANGQVTC 2168
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP P+ G C + + D+NDN+P V+ SL +PED +GTV+ +VS SD D G N ++
Sbjct: 3014 NP-PMAGHCTVLVEILDENDNSPEVVVTPLSLPVPEDAQLGTVIALVSVSDRDSGANGQV 3072
Query: 143 SW 144
+
Sbjct: 3073 TC 3074
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
+++KF +P + G L T+ + ++VE T KG+ P + C + + D N
Sbjct: 1598 TLSKFHLDPVNGYIRVKGNLDFE-DTKLYEIQVEATD-KGTPP--MADHCTVLVEILDIN 1653
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DN P + SL + ED P+GT++ ++S SD D G+N +++
Sbjct: 1654 DNVPELVIKSLSLPVLEDAPLGTIIALISVSDLDSGINGQVTC 1696
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D ND++P+F VS+ L+IPE + + + ASDAD+G N+KL++ L PN F D
Sbjct: 2810 VKDINDHSPVFSVSEQKLAIPESRLLDSRFPLEGASDADVGENAKLTYR-LSPNEFFILD 2868
Query: 157 L 157
+
Sbjct: 2869 I 2869
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
I N R V L++ L EE+ L + T G P L G+ + I+V D NDN P
Sbjct: 2869 IINKKGRGKYPVLVLRKLLDREENPQLLLFLTATDGGKP-ELTGSVSLLILVLDANDNAP 2927
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
IF S Y +++ E+ P T+V ++ASDAD +N +L ++ + L S +R ++++N
Sbjct: 2928 IFDRSIYEVTMYENAPNQTLVIRLNASDADEEINKELIYSF---SSLVSPSIRRKFLMN 2983
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+ C + V D NDN P V SL + ED P+GTV+ +S SD D VN +++
Sbjct: 329 PMSNHCKVLVKVLDVNDNAPELAVRSLSLPVREDAPLGTVIAFISVSDRDSSVNGQVTC 387
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT I + D NDN P F S Y + + E+ P GT+ +V+ASD D GVN + ++
Sbjct: 1531 LTGTTQLMITILDVNDNAPAFERSVYEVRLSENAPNGTLAVIVNASDLDEGVNKDIVYS 1589
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E L++ G P L GT I V D NDN P F S Y + + E+ P GT+
Sbjct: 1983 REETQELRLLLIAVDGGKP-ELTGTVQLLINVLDANDNAPEFDKSVYKVRLLENTPNGTL 2041
Query: 126 VQVVSASDADLGVNSKLSW 144
V ++ASDAD G+N ++ +
Sbjct: 2042 VIKLNASDADEGINKEIVY 2060
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E L + T G P L G + I V D NDN P+F + Y + + E
Sbjct: 196 LRKVLDREETPELHLLLTATDGGKP-ELEGRVHLLITVLDVNDNAPLFSQAVYRVHLLET 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
+ GT+V ++ASDAD GVN ++ + F SD+ V N +D + +
Sbjct: 255 IANGTLVTTLNASDADEGVNGEVVF-------FFGSDVPVNIRKNFKIDSSSGE 301
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FPV+ L I E P G+ + + ASD+D+G NS L++ L N F+ D
Sbjct: 1432 VKDINDNPPVFPVAVKKLFIYESRPPGSRIPLEGASDSDIGANSLLTY-VLSANEYFTLD 1490
Query: 157 LR 158
++
Sbjct: 1491 VK 1492
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+F + L IPE +G+ + A+DAD+G NS L++ L P+ FS D
Sbjct: 123 VKDINDNPPVFREREQRLFIPESRLLGSHFPLEGAADADIGTNSLLTYT-LSPSDYFSLD 181
Query: 157 LRVEWVINRSV 167
++ +++S+
Sbjct: 182 IQASDELSKSL 192
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT I V D NDN P F S Y + + E+ GT+V +++SDAD G NS++ ++
Sbjct: 753 LTGTVQLLINVLDVNDNEPAFDQSVYKVQLLENTANGTLVIKLNSSDADEGSNSEIVYS- 811
Query: 147 LEPNGLFSSDL 157
FSSD+
Sbjct: 812 ------FSSDV 816
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F ++++ + E+ P G + VSA DAD
Sbjct: 963 TARDGGSPS-LSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDADA 1021
Query: 137 GVNSKLSWNELE 148
N+++S++ +E
Sbjct: 1022 QENARVSYSLVE 1033
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F ++++ + E+ P G + VSA DAD
Sbjct: 1735 TARDGGSPS-LSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDADA 1793
Query: 137 GVNSKLSWNELE 148
N+++S++ +E
Sbjct: 1794 QENARVSYSLVE 1805
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F ++++ + E+ P G + VSA DAD
Sbjct: 3113 TARDGGSPS-LSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDADA 3171
Query: 137 GVNSKLSWNELE 148
N+++S++ +E
Sbjct: 3172 QENARVSYSLVE 3183
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F ++++ + E+ P G + VSA DAD
Sbjct: 2207 TARDGGSPS-LSSTASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDADA 2265
Query: 137 GVNSKLSWNELE 148
N+++S++ +E
Sbjct: 2266 QENARVSYSLVE 2277
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G+ + V D NDN P F S+Y + I E+ GT V ++ASD D G N ++S++
Sbjct: 2498 LTGSVQVLVTVMDVNDNAPRFQQSEYEVRIFENSDNGTTVIRLNASDPDEGTNQEVSYS 2556
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP+ +L E + + + A+DAD+GVN+ LS+ +L + FS D
Sbjct: 654 VKDINDNPPVFPMLVKTLGFSESKLLDSRFPLEGATDADIGVNALLSY-KLSSSEFFSLD 712
Query: 157 LR--------VEWVINRSVDQH 170
++ + V+ +S+D+
Sbjct: 713 IQTNDELSQSLSLVLRKSLDRE 734
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FPV + + I E ++ + ASD D+GVNS L++ +L + F+ D
Sbjct: 2399 VKDINDNPPVFPVKEQRVLIYESRLPDSLFPLEGASDEDVGVNSILTY-KLSSSEYFTLD 2457
Query: 157 LR--------VEWVINRSVDQH 170
++ + V+ +S+D+
Sbjct: 2458 VKTNSDDNTQIGLVLRKSLDRE 2479
>gi|348503596|ref|XP_003439350.1| PREDICTED: cadherin-18 [Oreochromis niloticus]
Length = 796
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 209 FSVDPKTGIIRTALANMDREAR--EHYTVVIQAKDMAGQVGGLSGSTTINITLTDVNDNP 266
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG--LFS 154
P FP Y L +PE VG V + A+D DLGVN+ + ++ + G +FS
Sbjct: 267 PKFPQKNYQLYVPESAQVGKPVGKIKANDEDLGVNADIRYSIINSEGANMFS 318
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P FP + S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKVQDINDNAPKFPDGPFVASVPEMSEVGTSVLQVTATDADDPTYGNSARIVYSILQGQP 207
Query: 152 LFSSD 156
FS D
Sbjct: 208 YFSVD 212
>gi|148678178|gb|EDL10125.1| mCG133388, isoform CRA_h [Mus musculus]
Length = 736
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LKR L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 171 PDGRKYPEL-ILKRFLDREEHNFHQLVLTAVDGGDP-PRSGTTQIRIQVTDINDNPPMFS 228
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVD 168
+S+++ EDVP G V V+A+D D GVN+++++ + D +VE + N +D
Sbjct: 229 QDVFSVTLREDVPPGFSVLQVTATDQDEGVNAEITY------AFHNVDEQVERIFN--LD 280
Query: 169 QHTNK 173
+ T +
Sbjct: 281 KRTGE 285
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL T+ + D NDN P+F + Y + + E+ P GT + VSASD DLG N +S+
Sbjct: 416 PLSSNVIITLHISDVNDNAPVFHQASYLVHVAENNPPGTSIAQVSASDPDLGSNGLISYS 475
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 476 IIASDLEPRALSS 488
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P+GTV+ ++ D D G N
Sbjct: 305 EAKDPGDLASHCSIQVKILDENDCVPEVIVTSVFTPLPEDSPLGTVIALIKTRDRDSGEN 364
Query: 140 SKLSWNELEPNGLF---SSDLRVEWVINRSVDQHT 171
+ + L G SS + V +R++D+
Sbjct: 365 GDVYCHVLGNEGFVLKSSSKNYYKLVTDRTLDREA 399
>gi|66773262|ref|NP_001019348.1| protocadherin 2 gamma 4 precursor [Danio rerio]
gi|51557471|gb|AAU06421.1| protocadherin cluster 2 gamma 4 [Danio rerio]
Length = 935
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
+ P R Y + K R ++ + + T G P P GT + V D NDN P+
Sbjct: 171 LTRPNGRKYGELVLNKELDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPV 229
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 230 FSQAVYKVSLPENSPVDTVVVTVSATDADEGQNKEVTY 267
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSW 144
PL+ T+ V D ND+ P F + YS +P+DV VGT V+QV +A D D G+NS++ +
Sbjct: 640 PLLSETTVTVHVVDGNDHPPRFLSAGYSTPVPKDVSVGTRVIQVAAADDGDFGLNSRVEY 699
Query: 145 --NELEPNGLFSSDLRVEWV 162
EP F D WV
Sbjct: 700 LLTGQEPAARFGLDAETGWV 719
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 82 SNPGP----LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
S PGP L GT + VED+NDN P F S ++ SI ED P GT V + + SDAD
Sbjct: 13 SLPGPGSPALTGTGTVIVTVEDENDNTPTFARSLFTASISEDAPAGTDVLLANCSDADAS 72
Query: 138 VNSKLSW 144
N+ +S+
Sbjct: 73 SNALVSY 79
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
G C T+ V D NDN P+F ++Y+ + E+ P GT V + A+DAD G N+ +++ E
Sbjct: 854 GFCAVTVDVLDVNDNPPVFAGAEYTPEVAENAPSGTPVVTLRATDADSGPNAVVAYALHE 913
Query: 149 PNG-LFSSD 156
+G LF+ D
Sbjct: 914 ADGDLFAVD 922
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
++ T G P PL I+V + N + P FP + + +PE + VG VV V++A
Sbjct: 733 FRLSVTARDGGRP-PLSAGATVRILVTEANAHTPEFPRDRVRVEVPETLAVGAVVCVLAA 791
Query: 132 SDADLGVNSKLSWNELEPNG 151
DAD N L++ NG
Sbjct: 792 RDADPAENGLLAYAVSAGNG 811
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T G L R + + V G +P L + + V D NDN
Sbjct: 86 SQFSINPSTGQIITSGPLDRETQANYTLIVV---ARDGGDPLALSSSATVLVSVADVNDN 142
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y +P G V V+ +D D G NS+L ++
Sbjct: 143 PPRFQHHPYVTHVPSPAAAGLFVFAVTVTDPDTGPNSELHFS 184
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + + V D NDN P F Y L PE VG+ V V+A+D D G N ++ + P
Sbjct: 535 STDVAVAVTDVNDNAPRFREPSYFLECPELPEVGSGVARVAATDPDEGPNGQVFYLLKSP 594
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F D + N+ ++ N
Sbjct: 595 SEFFRVDAVTGEIFNKQPLRYLN 617
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
P T + V D+ND++P F SQ +S S+PE+ PVG V + SD D G N+
Sbjct: 432 PRSATARVVVNVLDENDHSPRF--SQLFSASVPENAPVGFTVTRATTSDEDEGQNA 485
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P G + +ED NDN P+ V + + E+ P GTVV + ASD DL N
Sbjct: 1166 PATGRAVLLVTLEDVNDNGPVLTVGE--ARVAENQPPGTVVTTLRASDPDLPPN 1217
Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 83 NPGPLVGT----CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
N GP+ G + V D ND P+F Y + I E VP GT V V A+DAD
Sbjct: 1055 NAGPIRGADVDEVAVNVTVLDANDP-PVFGAETYRVRISEGVPPGTHVTFVGAADAD 1110
>gi|402882353|ref|XP_003904709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-22 [Papio anubis]
Length = 830
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
+ G TI+V D NDN P FP Y SI E P+GT V V A D+D+G N+ ++++
Sbjct: 251 MAGQLGXTIVVTDVNDNPPRFPQKMYQFSIQESAPIGTAVGRVKAEDSDVGENTDMTYHL 310
Query: 147 LEPNG 151
E +G
Sbjct: 311 KEESG 315
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D ND+ P F Y S+ E P GT V V ASDAD G +++L ++ L+
Sbjct: 157 IKVQDINDSEPRFLHGPYIGSVAELSPTGTSVMQVMASDADDPTYGSSARLVYSVLDGEH 216
Query: 152 LFSSD 156
F+ D
Sbjct: 217 HFTVD 221
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus impatiens]
Length = 4739
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKV--ENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P T + G L R R E + L++ ++ KG++ PL + V+D NDN
Sbjct: 924 FRVDPVTGVLTVFGRLDRE-RQEIYELRIRAQDNGGKGTDSPPLYSDALVRVTVDDVNDN 982
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSD 156
P F +S Y++ I EDVP+ TVV V A+D D + + + +E G F D
Sbjct: 983 APSFALSTYTVKIREDVPIWTVVAVXXATDPDEASGGDIEYFLSDAMESEGYFKVD 1038
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K VG L R E K T H P + I+V D NDN
Sbjct: 3114 KFSLDKETGVLKTVGQLDR-----ETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDN 3168
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F + YS ++PEDV VGT+V V A+D D+G+N K+ +
Sbjct: 3169 APKFTMQTYSATLPEDVEVGTLVTKVHATDNDIGINRKIRY 3209
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVE--DQNDNNPIFPVSQYS 113
NV L R R + + L+V T +KG + + +TT++V D ND NP+F ++Y
Sbjct: 130 NVDVLNRE-RKDRYVLEVRATLNKGDGKNRVTIMEADTTVVVTILDTNDLNPLFYPTEYE 188
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+I ED P+ + V A DADLG N ++ ++ E F+
Sbjct: 189 ATITEDTPLHRSILRVIAEDADLGRNGEIYYSFAEETDQFA 229
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 39 FTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
FTFSI F+ N TT L G EH L+V T P L T
Sbjct: 1233 FTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEV--TVRDDGRPS-LSSTTR 1289
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D ND+ P F Y++ IP + V A+D D+G N K+ ++
Sbjct: 1290 VVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLANDKDIGDNGKIQYS 1342
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y SI ED +G
Sbjct: 3343 RARDYFLTIQAID--GGIP-PLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 3399
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D N +S+
Sbjct: 3400 VTQVFANDLDSEENGNVSY 3418
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V L R L+ + H + V S+P PL ++ V D+ND+ P F + Y +S+
Sbjct: 2815 VKPLDRELK-DNHLIGV--LAETDSSP-PLTALAEISLQVLDENDHAPKFESNPYGISLA 2870
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
E++ GT + + A D DLG N ++ ++ F SD+
Sbjct: 2871 ENIEEGTSILKIIAHDEDLGSNGEVRYS-------FGSDI 2903
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F S+ + I E+ P GT V ++A D D G N+ +S++
Sbjct: 497 INVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYISYS 547
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T + +K L E+ K N +N CN + V D+NDN P
Sbjct: 1763 FFMNPSTGII----VIKNELDYEK--TKFYNLTVAATNMASAEAHCNVIVHVLDRNDNAP 1816
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE 148
F + Y+ I E +G++V V+ A DAD +N+ L+++ +E
Sbjct: 1817 RFLQATYNGEISEGASIGSLVLTNSSTPLVIKAEDADSELNALLNYDIVE 1866
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LKR+L E H L T + + V D NDN P F Y+ S+ E
Sbjct: 2401 LKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHA 2460
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
G V VVSASD D V+ KL++
Sbjct: 2461 ERGQFVTVVSASDPDY-VDDKLTY 2483
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN P+F Y + +PE P+ T V + +DAD G N+
Sbjct: 394 DLNDNAPVFSREIYEVKVPETAPINTPVIRLKVTDADEGKNA 435
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 38/99 (38%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ PT+ + G E + L VE P V I + D NDN P
Sbjct: 2076 FVIGPTSGAIRTTGIRFDREVCEHYELIVEAKSQMPGKEKPRVAHVIVNITILDINDNCP 2135
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y + D G V+ V A D D G N ++ +
Sbjct: 2136 MFVNLPYYAVVSVDAQKGDVITKVHAVDMDSGDNGEVRY 2174
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNS 140
I + D NDN P+F +S Y+ + ED P+G TV+Q V +DAD+ N+
Sbjct: 3474 IEILDANDNPPLFSLSNYTAVVQEDKPLGHTVLQFV-VTDADIEPNA 3519
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ + D NDN P F S S I E GT V +A+DADLG N++++++ + +
Sbjct: 866 VTILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGENARVTYSLVTE----T 921
Query: 155 SDLRVEWV 162
+D RV+ V
Sbjct: 922 NDFRVDPV 929
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L+ + + V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 3256 LMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYS 3314
>gi|297676259|ref|XP_002816051.1| PREDICTED: protocadherin gamma-A7 [Pongo abelii]
Length = 817
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 31 KSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVG 89
+S +P FS+A + T+ + V L+R L R EE + T G +P P
Sbjct: 168 QSYQLSPNRHFSLAVQSGDDGTKYPELV--LERVLDREEERVHHLVLTASDGGDP-PQSS 224
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + V D ND+ P+F + QY +++PE+VPVGT + V A D D GVN +++++
Sbjct: 225 TARIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHILMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ IPE+ P G + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIPENNPRGASIFLVTAQDHDSEENAQVTYSLAE 493
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGELSTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDINDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|395504760|ref|XP_003756715.1| PREDICTED: protocadherin gamma-A2-like [Sarcophilus harrisii]
Length = 1061
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + T G P GT + V D NDN P+F S Y++S+PE+
Sbjct: 433 LERALDREEEAVHHLMLTAWDGGEP-LRSGTARIRVTVLDVNDNAPVFSQSVYTVSVPEN 491
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
V GT++ V+A+DAD G+NS++ + +++ G
Sbjct: 492 VSQGTILLTVNATDADEGINSQVKYFQVKIPG 523
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + L I E GT + SA D D+GVNS S+ EL P+ FS
Sbjct: 360 ITDINDNAPRFLAEELELKISETTTPGTAHLLESAYDRDVGVNSLQSY-ELSPSHHFS-- 416
Query: 157 LRV----------EWVINRSVDQH 170
L+V E V+ R++D+
Sbjct: 417 LKVQNRAGGVKYPELVLERALDRE 440
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPEDV 120
RAL E+ + V N + + G + +T I+ V D NDN P F S YS I E+
Sbjct: 645 RALDREQ--VSVYNITVRAKDFGSPALSTDTHILLQVADINDNPPTFSQSTYSAYIQENN 702
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPN 150
P G + ++A D D N+ ++++ +E N
Sbjct: 703 PRGASIYSLTAHDPDSEQNALITYSIIESN 732
>gi|350581185|ref|XP_003480982.1| PREDICTED: protocadherin alpha-5 [Sus scrofa]
Length = 850
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T+K L E+ L N +P PL G C + + D+NDNNP ++ SL + ED
Sbjct: 302 TVKGKLDYEDCNLYEINIDAVDKSPFPLTGHCKVIVKLLDENDNNPEIVITSLSLPVQED 361
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P GTV+ ++S SD D G N +++ +
Sbjct: 362 TPPGTVIALISLSDRDSGANGQVTCS 387
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+EH L + G P L GT I V D NDN P F S Y++ + E+ P GT+V
Sbjct: 204 TQEHRLLL--IAIDGGKP-ELTGTVQLLINVLDANDNAPEFDKSIYNVRLLENAPNGTLV 260
Query: 127 QVVSASDADLGVNSKLSW 144
++ASDAD G+N ++ +
Sbjct: 261 IKLNASDADEGINKEIVY 278
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ G +P L T ++ V D NDN P+F +Y++ + E+ G + VSA DAD
Sbjct: 425 SARDGGSPS-LWATARVSVEVGDVNDNAPVFAQPEYTVFVKENNAPGCHIFTVSARDADA 483
Query: 137 GVNSKLSWNELE 148
N++++++ +E
Sbjct: 484 QENARVAYSLVE 495
>gi|332234736|ref|XP_003266560.1| PREDICTED: protocadherin beta-14 isoform 1 [Nomascus leucogenys]
gi|441596402|ref|XP_004087311.1| PREDICTED: protocadherin beta-14 isoform 2 [Nomascus leucogenys]
Length = 842
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 240 LDRALDYEQEAELRLTVTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 298
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 299 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 339
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+ V D NDN P+F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 480 NITVQVSDVNDNAPVFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 538
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 167 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFYIK 225
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 226 IPDSSDRKIYPELVLDRALD 245
>gi|190338824|gb|AAI62560.1| Pcdh2g4 protein [Danio rerio]
Length = 935
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
+ P R Y + K R ++ + + T G P P GT + V D NDN P+
Sbjct: 171 LTRPNGRKYGELVLNKELDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPV 229
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 230 FSQAVYKVSLPENSPVDTVVVTVSATDADEGQNKEVTY 267
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 396 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 452 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 484
>gi|345798946|ref|XP_003434509.1| PREDICTED: cadherin-12 isoform 1 [Canis lupus familiaris]
Length = 754
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 58 VGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
VG ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 175 VGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIF 234
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 235 HLKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 273
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D + P+F
Sbjct: 287 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDVEEP-PVFS 345
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 346 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 374
>gi|332234759|ref|XP_003266571.1| PREDICTED: protocadherin gamma-B7 [Nomascus leucogenys]
Length = 807
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT + V A+D D G+NS+++++ L
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFL 282
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C I V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIIEVLDENDNSPEIIITSLSDQIMEDSPSGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDRDSGENGEVRCS 385
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSPGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
Length = 3582
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAALDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 SFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
>gi|11142063|gb|AAD43762.2|AF152501_1 protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE L++ T G +P P GT I V D NDN P F Y + I ED P+ +
Sbjct: 203 REEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPISFL 261
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
V VSA+D D GVN ++S++ + + S +V+++
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFL 298
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 437 NMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
>gi|358413182|ref|XP_596806.4| PREDICTED: protocadherin beta-8 [Bos taurus]
gi|359067547|ref|XP_002689300.2| PREDICTED: protocadherin beta-8 [Bos taurus]
Length = 788
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R EE ++ T G +P P GT + I V D NDN P F Y + IPED P G +
Sbjct: 202 REEEAEFRLTLTAQDGGSP-PRSGTAHIYIEVVDINDNAPEFEQPFYRVKIPEDSPKGFL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D GVN ++S++
Sbjct: 261 VVKVSATDVDTGVNGEISYS 280
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L G C I V D NDN P +S + IPE+ P TVV V S SD D N K+S
Sbjct: 325 GSLSGKCTVLIQVVDVNDNAPEVTMSALTGQIPENSP-ETVVAVFSVSDLDSEENGKVSC 383
Query: 145 N 145
+
Sbjct: 384 S 384
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|355691687|gb|EHH26872.1| hypothetical protein EGK_16950 [Macaca mulatta]
Length = 732
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 182 IPDSSDRKIYPELVLDRALD 201
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N+ ++++ L
Sbjct: 436 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNALVTYSLL 491
>gi|343790997|ref|NP_001230544.1| cadherin-24 precursor [Sus scrofa]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLQAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
Score = 35.8 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP + + V+D + P F + Y LS+PE+ GT+V VSASD D
Sbjct: 353 GPFKDVASVRVAVQDAPEP-PAFSQAAYHLSVPENKAPGTLVGQVSASDLD 402
>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
Length = 3579
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|326673393|ref|XP_003199872.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++ +K+ T G +P L G+ + I V D NDN P+F S Y ++ E+ P T+
Sbjct: 192 REKQNEIKLVLTAVDGGDP-QLSGSIDIHITVLDANDNAPVFMQSVYKATVTENAPKDTI 250
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+DAD G+NSK+ ++
Sbjct: 251 VSTVSATDADEGINSKIEYS 270
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPEDVP----VGTVVQVVSAS 132
G +P PL + I+++DQNDN P ++PV + + E VP VG +V V A
Sbjct: 525 QDGGSP-PLSSNASVKILIQDQNDNAPQVLYPVQSGASVVAEIVPRSADVGYLVTKVVAV 583
Query: 133 DADLGVNSKLSW 144
D D G N+ LS+
Sbjct: 584 DVDSGQNAWLSY 595
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L +C + V D NDN P+ + + I E+ TVV +++ D D G N
Sbjct: 310 QASDQGGLTDSCKIIVDVVDINDNAPVINIMSKTNVIAENSASETVVTMINVQDVDSGDN 369
Query: 140 SKL--SWNELEPNGLFSSD 156
K+ S NE P L S++
Sbjct: 370 GKVQCSVNENIPFSLKSTN 388
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D NDN P+F S Y S+ E+ G + V A DAD N+++S+
Sbjct: 432 ISDVNDNAPVFEQSSYQASVQENNTPGLSIFTVRARDADFNQNARVSY 479
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI + D NDN PIF I E V +G+ + A D D+G+N S+ L+P F
Sbjct: 110 TIEITDVNDNTPIFKKRSVVFKISESVILGSKFMLEPAVDLDVGINGLQSY-MLKPTDNF 168
Query: 154 SSDLR--------VEWVINRSVDQH 170
S + VE V+ + +D+
Sbjct: 169 SLKFKNQAGDGKHVEMVLQKPLDRE 193
>gi|157649933|gb|ABV59358.1| protocadherin nu11 [Callorhinchus milii]
Length = 991
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT +IIVED NDN+P++ S Y +S+PE+ P GT+V V+A+D D G N++++++
Sbjct: 225 GTVAISIIVEDANDNSPVYSQSVYRVSLPENTPRGTLVLTVNATDLDEGYNAEIAYS 281
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN PIFP Q+ L I E GT + A D D+G+NS ++ EL N FS +
Sbjct: 124 VLDVNDNAPIFPKRQFRLEISELAAPGTRFTLERAQDPDVGINSIQTY-ELVTNEYFSLN 182
Query: 157 LRV--------EWVINRSVDQ--HTN 172
++ E V+ +++D+ H+N
Sbjct: 183 IQTRNVGGKSPELVLEKTLDREIHSN 208
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+K L EE+ + N + K P + C + + D NDN P ++ + ED
Sbjct: 305 VKGNLDFEENDVFEINVQAKDKGPYAIPVYCEVLVTITDVNDNAPEVTLTSLFSPVGEDA 364
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
GTVV V+SA+D D G N ++
Sbjct: 365 LPGTVVAVISAADRDSGANGQIQCQ 389
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P F Y+ + E+ VG+ + V+A D D NS+LS++
Sbjct: 435 PLTAHKHIRVEVSDINDNAPRFAQPLYTAHVMENNLVGSSIYSVTAYDPDSKQNSRLSYS 494
Query: 146 ELE 148
LE
Sbjct: 495 ILE 497
>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
Length = 3648
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|348514335|ref|XP_003444696.1| PREDICTED: protocadherin gamma-A7-like, partial [Oreochromis
niloticus]
Length = 556
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK++L E EH L + T G P P GT N TI V D NDN PIF Y LSI
Sbjct: 194 LKKSLDREQNNEHKLVM--TAVDGGKP-PRSGTLNVTITVLDSNDNRPIFSQEIYHLSIK 250
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E++PVG V ++A+D D G N ++ +
Sbjct: 251 ENIPVGASVFRMNATDYDEGANGEVEY 277
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
PL+G C I V D NDN P V+ S ++PED +GTV+ ++S D D GVN K+
Sbjct: 327 PLMGECRLIIKVLDVNDNPPEIEVTSLSNTVPEDSKLGTVISLLSVKDKDFGVNGKI 383
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 95 IIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
IIVE D NDN+P FP + + I E G Q+ +A D D G+NS ++ + N
Sbjct: 118 IIVEITDINDNSPSFPAREQTFEIAEHTLPGKRFQLHTARDPDAGINSIRTYT-ITSNEH 176
Query: 153 FSSDLRVE-------WVINRSVDQHTN 172
F ++R V+ +S+D+ N
Sbjct: 177 FEVNIRQSDAGKVPFLVLKKSLDREQN 203
>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
Length = 3574
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|301753501|ref|XP_002912637.1| PREDICTED: protocadherin gamma-B4-like [Ailuropoda melanoleuca]
Length = 803
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ ++ T +P PL T ++V D NDN P+F Y + +PE+VP GT+
Sbjct: 202 REEQKSYRLTLTALDCGDP-PLSSTAQIQVLVTDANDNPPVFSQEVYRVGVPENVPPGTL 260
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
V V A+D D GVN++++++ E + DL
Sbjct: 261 VLRVMATDQDEGVNAQITFSFSEAGQITQFDL 292
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + + T+ + D NDN P+F Y + + E+ P G + V A D DLG N ++S+
Sbjct: 429 PLSSSSSVTLHIGDVNDNAPVFGQPFYVVHVAENNPPGASIAQVGAFDPDLGHNGRVSYS 488
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 489 IVASDLEPRALAS 501
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ ++ +ED ND+ P F + + L I E G + SA DAD+G NS ++ +L P+
Sbjct: 118 HVSVDIEDINDHTPKFTQTSFDLQISESTKPGARFILGSAHDADIGTNSLQNY-QLNPSD 176
Query: 152 LFS 154
FS
Sbjct: 177 HFS 179
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V+D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 548 VLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVL 607
Query: 148 EPN--GLFSSDLRVEWV 162
+ + GLFS LR V
Sbjct: 608 QASEPGLFSLGLRTGEV 624
>gi|148704389|gb|EDL36336.1| cadherin-like 24 [Mus musculus]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLKAQDPDLGDNALMAYSILDGEG 303
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|426350332|ref|XP_004042731.1| PREDICTED: protocadherin gamma-A2 [Gorilla gorilla gorilla]
Length = 823
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+ AL R EE + G +P L GT + V D NDN P+F +Y +SIPE+
Sbjct: 196 LESALDREEEAVHHLVLVASDGGDP-VLSGTSRICVKVLDANDNAPVFTQPEYRISIPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVGT + V+A+DAD G N+++ +
Sbjct: 255 TPVGTRILTVTATDADEGYNAQMVY 279
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 55 YKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
Y+ V T RAL E+ + + T G NP L + + V D NDN P F + YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLTAKDGGNPS-LSTDAHILLQVADINDNAPAFSRTSYS 458
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
+PE+ P G V V+A D D N+ ++++ E
Sbjct: 459 TYMPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + +A DAD+G N+ L L PN FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENA-LQKYALNPNDHFSLD 181
Query: 157 LR 158
+R
Sbjct: 182 VR 183
>gi|426233921|ref|XP_004010954.1| PREDICTED: cadherin-24 [Ovis aries]
Length = 720
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|293342078|ref|XP_001054792.2| PREDICTED: cadherin-24 [Rattus norvegicus]
gi|293353825|ref|XP_573774.3| PREDICTED: cadherin-24 [Rattus norvegicus]
gi|149063914|gb|EDM14184.1| similar to Cadherin-like 24 (predicted) [Rattus norvegicus]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLKAQDPDLGDNALMAYSILDGEG 303
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|32880203|ref|NP_659422.2| cadherin-24 isoform 2 precursor [Homo sapiens]
gi|30171995|gb|AAP20590.1| cadherin-24 [Homo sapiens]
gi|37181510|gb|AAQ88566.1| CDH24 [Homo sapiens]
gi|119586594|gb|EAW66190.1| cadherin-like 24, isoform CRA_b [Homo sapiens]
gi|119586596|gb|EAW66192.1| cadherin-like 24, isoform CRA_b [Homo sapiens]
gi|225000056|gb|AAI72283.1| Cadherin-like 24 [synthetic construct]
gi|225000556|gb|AAI72574.1| Cadherin-like 24 [synthetic construct]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|410961900|ref|XP_003987516.1| PREDICTED: cadherin-24 [Felis catus]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|410266134|gb|JAA21033.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 929
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|402875686|ref|XP_003901628.1| PREDICTED: cadherin-24 isoform 1 [Papio anubis]
gi|402875688|ref|XP_003901629.1| PREDICTED: cadherin-24 isoform 2 [Papio anubis]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|395859283|ref|XP_003801969.1| PREDICTED: cadherin-24 isoform 1 [Otolemur garnettii]
gi|395859285|ref|XP_003801970.1| PREDICTED: cadherin-24 isoform 2 [Otolemur garnettii]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTILDGLPFFSVD 202
>gi|387542568|gb|AFJ71911.1| cadherin-24 isoform 2 [Macaca mulatta]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|301781288|ref|XP_002926067.1| PREDICTED: cadherin-24-like [Ailuropoda melanoleuca]
Length = 713
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|291387512|ref|XP_002710182.1| PREDICTED: protocadherin gamma subfamily B, 7 [Oryctolagus
cuniculus]
Length = 807
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 47 IANPTTRLYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
I + + YK V GTL R +T E + ++ T G P PL + T+ + D NDN
Sbjct: 394 IHSSSNNYYKLVTDGTLDRE-QTPEFNVTIKATD--GGQP-PLSSSSTVTLRIGDVNDNA 449
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P+F + Y + +PE+ P G + VSASD D+G N ++S+ ++LEP L S
Sbjct: 450 PVFHQAAYVVHVPENNPPGASIAQVSASDPDVGPNGQVSYSIVASDLEPRALSS 503
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP GT I+V D NDN P+F Y +S+ ED P GT V V A+D D
Sbjct: 213 TALDGGNPAR-SGTAQIQILVVDANDNPPVFSQDVYRVSLREDAPPGTTVLRVRATDQDE 271
Query: 137 GVNSKLSWNEL 147
GVN++++++ L
Sbjct: 272 GVNAEVTYSFL 282
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ +++ED ND+ P F + +L I E V G + SA D D+GVNS LS +L PN
Sbjct: 118 HVVVVIEDINDHAPQFRKDEINLEISESVSPGMRTVLESAKDPDIGVNS-LSKYQLSPNE 176
Query: 152 LFS--------SDLRVEWVINRSVDQHT 171
FS D E V+ + +D+ T
Sbjct: 177 YFSLVVKDNPDDDKSPELVLQKPLDRET 204
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 550 VLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 609
Query: 148 EPN--GLFSSDLR 158
+ + GLFS LR
Sbjct: 610 QASEPGLFSLGLR 622
>gi|158260175|dbj|BAF82265.1| unnamed protein product [Homo sapiens]
Length = 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
Length = 3575
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 872 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 931
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 932 QITYSLNEESINGLGSPD 949
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 951 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1006
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1007 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1045
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1055 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1110
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1111 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1152
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 680 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 739
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 740 VDPRTGWV 747
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 408 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 463
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 464 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 502
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 747 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 805
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 806 EDQPPGTPVTTVTATDPD 823
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 564 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 622
>gi|395504752|ref|XP_003756711.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 872
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTI 95
P+F F I + T+ Y + L +AL EE+ +++ T G + P GT +
Sbjct: 264 PSFHFQIHTRSSGEGTK-YPEL-MLDKALDREEYPEIRLTLTALDGGSV-PKSGTAEVRV 320
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+V D NDN P+F S+Y + +PED P+G++V +VSA D D+G + ++ ++
Sbjct: 321 LVMDINDNAPVFVQSRYEVQVPEDSPIGSLVVIVSARDLDMGNSGQILYS 370
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N TI+V D NDN P+F Y L + E+ + VSASD D G N+K++++ L
Sbjct: 526 NLTILVSDVNDNPPVFTQPTYILYLQENNIPALHIGRVSASDRDSGTNAKVTYSLL 581
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
V+D ND++P F ++ L IPE+ P GT+ + +A D D+G N
Sbjct: 213 VQDINDHSPTFLETEMILKIPENTPPGTLFSLKNAEDLDVGEN 255
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
T + +N G ++ + + ++ + ++ G L G C + V D NDN P +S
Sbjct: 381 TFEVNQNSGEVRMRKKLDFETVQSYEVDIEATDGGGLSGKCTVVVQVTDVNDNPPEVTIS 440
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ I E++P +V V D D G N K+
Sbjct: 441 SLTNPISENLP-EAMVAVFKTRDRDSGDNGKM 471
>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
Length = 3578
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G PLV T+ + D NDN P+ + SL++ E VGT + A+DAD GVN+
Sbjct: 2179 GPENKPLVAQVAVTVAIADINDNTPVLMAAPASLTLSEATAVGTTLHTFEATDADAGVNA 2238
Query: 141 KLSWNELEP-NGLFSSDLRVEWVINRSVD 168
L+W+ + NG FS + E + R+ D
Sbjct: 2239 ALTWSLQDTNNGRFSINENGELKLERAFD 2267
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T N TII+ D NDN P F ++++ ++PED+ V++A+DAD+GVN+ L++
Sbjct: 4217 LSSTMNVTIIIGDLNDNRPRFTSTEFTAAVPEDINATVPALVLNATDADIGVNALLNFT- 4275
Query: 147 LEPNGLFSSD 156
L SSD
Sbjct: 4276 -----LLSSD 4280
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKV--ENTKHKGSNPGPLVGTCNTTIIVED 99
+++ F + T RLY +G L R L+ ++L V +NT P T ++ V D
Sbjct: 4785 NVSLFEMDHTGRLY-TLGPLDRELQAS-YFLSVLVQNTA-----PPYFSTTATVSVTVLD 4837
Query: 100 QNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
NDN PIF S+SIPE+ P+G + + +D+D+G N++++ + +P G D
Sbjct: 4838 INDNAPIFVAPPMSVSIPENAPLGLLPVELEVTDSDVGTNAQVTLSVFDPIGKIDID 4894
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 81 GSNPGPLVGTCNTTIIV---EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
G+ P G C +IV ED NDN P F V+ ++I E + VGT V V+ASDAD G
Sbjct: 5340 GAALTPCKGHCTDHVIVLNVEDANDNAPQFAVAYQEITISESLTVGTPVAQVNASDADSG 5399
Query: 138 VNSKLSWNELEPNGLFSSD 156
VN+++ ++ +F+ D
Sbjct: 5400 VNAEVRFSVTMGGSIFAID 5418
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GPL T + T+++ D NDN+PIF Y+ S+ E+ G V+ V+A+DADLG+N+ + +
Sbjct: 3908 GPLNDTASVTVVIGDVNDNSPIFVQGVYNFSVAENTAPG-VIGNVAATDADLGINALIRY 3966
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 32 SGMYAPA-FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGT 90
SGMY A +SI + L N L+ + E + + N + + G L T
Sbjct: 3641 SGMYGTAGLQYSIVPSSGSHLFYLVGNYLYLRDNVDREVY--PILNIMVQARDGGNLTAT 3698
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ T+ + D NDN P FP SL I E+ PVG+ V + +ASD D GVN+ + + +
Sbjct: 3699 ASVTVSMIDLNDNPPSFPNPNISLGIMENRPVGSFVGLANASDPDEGVNALIRYEMTGAD 3758
Query: 151 -GLFS 154
GLF+
Sbjct: 3759 AGLFA 3763
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T+++ED NDN P+F + +L + E++ VGT + +++ +DAD G NS+++++ L+
Sbjct: 2988 NVTLLIEDVNDNAPVFNNAN-TLDVLEELSVGTTLSLLNVTDADAGANSQITYSILDSGS 3046
Query: 152 LF-----SSDLRVEWVINR 165
+ +LRV +NR
Sbjct: 3047 RLGINSTTGELRVLRRLNR 3065
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T T+ + D NDN P F YS+S+ E + VGT V ++ASDAD+G N+ + +
Sbjct: 1465 ATVTITVQIGDLNDNPPQFDQGSYSVSVSEALSVGTTVLQLTASDADVGENAAFFFERVS 1524
Query: 149 PNGLFSSDL 157
+ F++ L
Sbjct: 1525 GSASFNTTL 1533
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
A F +P T + + V L R +E + V +GS L T I+V D+NDN
Sbjct: 4587 AFFTVDPVTGVLETVTRLDR--ERQETFTCVVLAADQGSPS--LSSTTTVDIVVLDRNDN 4642
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
P F + Y+ + E + +G V SA+DAD N+ +S+ LEP+ F D
Sbjct: 4643 EPSFEQTAYAFDVAE-LFLGQFASV-SATDADTPANTNISFGLLEPSAAFGID 4693
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG-VNS 140
++ G + T+++ D NDN P+F QY +++PE GT + V A+DAD VN
Sbjct: 637 ASDGTFSSSAAVTVVILDVNDNAPVFDQVQYQVTVPESTATGTQLARVQATDADRALVNR 696
Query: 141 KLSWNEL 147
+L + L
Sbjct: 697 QLKYTLL 703
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV---QVVSASDADLGVNSK 141
G LVGT + V D NDN+P F S Y+ ++PE+ T + V A+DADL V +
Sbjct: 5754 GGLVGTALVYVTVLDVNDNHPQFASSAYAGAVPENAAANTAIAMSSVFEATDADLEVGNV 5813
Query: 142 LSWNELEPNGLF 153
+S+ + LF
Sbjct: 5814 VSYALENSSALF 5825
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PL + + I V D NDN P F S S+ + ED +G + + A+DAD G+N+ ++
Sbjct: 2358 PLSNSTSIMITVSDVNDNAPAFADSDISIGVAEDEAIGFALVQLVATDADSGINAAVT 2415
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 19/89 (21%)
Query: 86 PLVGTCN-----TTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD-- 135
PLVG+ TT++ V D +DN P F ++++PE+VP GT+V V + +DAD
Sbjct: 2870 PLVGSAAAEPWATTLVRVSVVDLDDNAPAFTSVPDTVTVPENVPRGTIVHVFTGADADVF 2929
Query: 136 --------LGVNSKLSWNELEPNG-LFSS 155
L +N+ + L PNG L++S
Sbjct: 2930 QSPAFSFVLALNTGAAPVTLAPNGTLYTS 2958
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G V + ++ V D NDN PIF S+++ ED+ GT V V+A D D GVN+ L +
Sbjct: 1047 GRFVSSMLLSLTVLDVNDNRPIFDGLPSSITLAEDLVTGTSVLTVTALDLDSGVNAALRY 1106
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVE----DQNDNNPIFPVSQYSLSIPEDVPVG 123
+EH + V+ T G ++ +VE D NDN PI S Y+ SIPE+V G
Sbjct: 2550 QEHEVSVQVTNQA-------TGLASSVFVVEVDVTDVNDNAPICSESSYAFSIPENVANG 2602
Query: 124 TVVQVVSASDAD 135
VV V++A+DAD
Sbjct: 2603 -VVGVITATDAD 2613
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F N +T R R EH+ + + G+ T I + D+NDN P
Sbjct: 3762 FAINTSTGAITTAAVFDREAR--EHYQVIVTARDAGNLASVFFDTATVEITILDENDNAP 3819
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS---WN 145
+ ++ ED V T + V ASD D G N+ L WN
Sbjct: 3820 QIEQVPTAFTVREDAAVNTTLFGVVASDRDTGANAALRFELWN 3862
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ G L G+ I+V+D NDN P+F V + + +PE+ ++ VV +DAD G+N +
Sbjct: 4004 DSGNLSGSTLVHIMVQDVNDNAPVFSVPRIDIVLPENENRSSLASVV-VTDADSGLNQQF 4062
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+ D NDN P+F S YS ++ E + +V VVSA+DAD G+
Sbjct: 3602 IRDLNDNVPVFSPSSYSTTVVETLQSDYLVAVVSATDADSGM 3643
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 92 NTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T++++ ++N+N P+F S +S+ E+V GTV+ + A+DAD G N ++ ++ +
Sbjct: 3194 NATVVIQILNENENAPVFQ-SSADISVLENVTTGTVIGQMVATDADEGANGEVRYSLTQG 3252
Query: 150 NGLFSSD 156
S D
Sbjct: 3253 GSFVSID 3259
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
D+NDN P FP + + ++ E + ++ V+A+DAD GVN +L+++ L P F+ D
Sbjct: 3402 DENDNAPTFPQAVVNSTVREGDTLPSL-GYVTATDADSGVNGQLTYSILSPTYGFTVD 3458
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 90 TCNTTII--VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ N TI+ VED NDN P+F Y +PED+ +G + V A+++DL
Sbjct: 4928 STNITIMINVEDVNDNAPVFEQLVYEYDVPEDLALGPMGLYVHATESDL 4976
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+I V D NDN P P + + ++ E+ P GT+V V +DAD G N L +
Sbjct: 4119 SITVTDVNDNAPTGPAT-FEATVLENQPAGTIVARVPFTDADAGANGLLQF 4168
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L T I V D NDN P+ + ++ E++P V + +DAD+G+N+++++
Sbjct: 4722 GQLSSTATALITVTDVNDNGPVV-AGGTNGAVTENMPFNETVLQLIVTDADIGLNAEVNY 4780
Query: 145 NELEPNGLFSSD 156
L LF D
Sbjct: 4781 TLLGNVSLFEMD 4792
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
I V D NDN P+ S S S+ ED V V+ VS SDAD G N
Sbjct: 1786 ITVLDVNDNAPM--ASNASFSVREDASVNAVLGTVSVSDADTGSN 1828
Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L+R R L + T G P P + TI + D NDN P F Y + E
Sbjct: 3060 LRRLNRESTDALVIIVTATDGGAP-PRSTSQTITIQLTDINDNVPTFLSLAYYEQVGELT 3118
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
PV T V V A DAD+ N+ + +
Sbjct: 3119 PVNTTVLQVEAVDADINDNAAIEY 3142
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 36 APAFTFSIAKFIANPTTRLYKNVGTLKRAL-------RTEEHWLKVENTKHKGSNPGPLV 88
A + S A F+ N + + G ++ A+ ++ L V T H+ PGPL
Sbjct: 2612 ADSLGLSNASFVLNSSAFTVDSEGVVRTAMALDADNASSQYFSLSVIITDHQ--YPGPLS 2669
Query: 89 GT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
C I V D NDN P++ S S + E G V+ + +DAD G N
Sbjct: 2670 SVPCPVEITVVDVNDNAPLY-TSSLSFVVAESAETGAVLGPLIFTDADSGNN 2720
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I + D+NDN+P+F + I E GT ++ V A+DAD G+N+ L+++
Sbjct: 1571 IYIVDENDNSPVFGALS-KVVITEATSPGTSIEQVFATDADSGMNAALTYS 1620
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
G + G + V DQNDN P+F + +LS+ E +G V +A+DADL N
Sbjct: 5223 GCSDGSFTVEKTVQVSVLDQNDNEPLFVGTTPSNLSLSEGAAIGDVFYTFAATDADLNSN 5282
Query: 140 SKLSWNELEPNGLFS 154
+ G+F+
Sbjct: 5283 ITFALVNTTRAGVFA 5297
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
VED+NDN+P F +L++ E+ P +V+ ++A+D D
Sbjct: 6000 VEDRNDNSPAFLQDAVNLTLAENTPANSVLVTLTATDPD 6038
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E +++V T G+N T + + D NDN P+F ++ YS SI E G ++
Sbjct: 5012 ELFVQVSATDVVGNN-----ATARVELTITDVNDNAPVFDLTSYSTSISEG-QTGALLS- 5064
Query: 129 VSASDADLGV 138
VSA+DAD G+
Sbjct: 5065 VSATDADEGL 5074
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 32 SGMYAPAFTFSIAKFIAN-----PTTRLYK---NVGTLKRALRTEEHWLKVENTKHKGSN 83
SGM A A T+SI + + P+++L+ G + + +K N + ++
Sbjct: 1611 SGMNA-ALTYSIVSVVPSVTGETPSSQLFAMAPTTGVVTTTAPLDFEKVKAYNITVQATD 1669
Query: 84 PG--PLVGTCNTTIIVEDQNDNNPIFPVS-QYSLSIPEDVPVG-TVVQVVSASDADLGVN 139
G P T T+ + D NDN P + ++ ED VG T+ + +DAD G+N
Sbjct: 1670 AGVPPRATTSVFTVELTDVNDNAPALSAGFALAYNVSEDSAVGLTLFAAMPVTDADSGLN 1729
Query: 140 SKLSWNELEP 149
+ LS+ P
Sbjct: 1730 AALSFTLSSP 1739
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV 122
R + E L+ T ++P + T TI +E N P+F ++++ E+ V
Sbjct: 1330 RTIPDETPQLQCSVTTRNLNDPA-MATTSPLTINIELLNKYTPVFVNLTDTMTVLENQAV 1388
Query: 123 GTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
GTVV V DADL N +++ L FS
Sbjct: 1389 GTVVGQVWVEDADLDENGAITFALLNATSFFS 1420
>gi|397517978|ref|XP_003846124.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B7 [Pan
paniscus]
Length = 808
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTMTLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDRDSGENGEVRCS 385
>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
griseus]
Length = 3070
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2123 AHDGPHEGHANLTVLVEDVNDNAPTFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2182
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2183 ISYHLASPGEGFSVD 2197
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E K++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1580 GTMRPLDREVEPAFKLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1638
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++ +
Sbjct: 1639 DAPSGTLLLQLQAHDPDDGDNGRVMY 1664
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + + +
Sbjct: 2353 PRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFT 2412
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2413 LSSGDPLGLFELD 2425
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ G L R L E EH L V H GS P T T+ V D ND P F
Sbjct: 1365 RLHATTGALSVVRPLDREQRAEHVLTVVALDH-GSPPRS--STQLLTVSVVDINDEAPAF 1421
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
P +YS+ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1422 PHQEYSVLLRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNTGVLTTLR 1479
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P++ GT + + A D D G NS
Sbjct: 864 GSGIPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPQNTSPGTPIYTLRALDPDSGANS 923
Query: 141 KLSWNELE-PNGLFSSD 156
+++++ L +G+F+ D
Sbjct: 924 QVTFSLLAGGDGMFTVD 940
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 47 IANPTTRLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
++ + L N G L RAL EE + PL+ + VED+ND+
Sbjct: 1461 VSGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHT 1520
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
P F + SL +PE T+ ++ ASD D G+N +L + L +P+G F+ DL
Sbjct: 1521 PTFGNTHLSLEVPEGQDPQTLT-ILRASDPDKGLNGQLQYRILDGDPSGAFTLDL 1574
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + + G P PLV + ++ ++D NDN P
Sbjct: 517 FSIDPTSGIITTAATLDYELEPQPQLIVLAT---DGGLP-PLVSSATVSVALQDVNDNEP 572
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 573 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGSFGLLSYS 612
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2465 TVEVLDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGTFGRLQYSLLE 2519
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT----VVQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P VP + + + A D D
Sbjct: 1706 GAAAGPLSTTVPITITVRDVNDHAPTFPTSPLRLRLPRSVPSLSRPTLALATLRAEDRDA 1765
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1766 GANASI 1771
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2029 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2084
Query: 147 LEPNG 151
L P+G
Sbjct: 2085 LSPSG 2089
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 659 GGLKSIVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGQLSY 718
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 719 HILAGNSPPLFALDAHSGLLTVAWPLARRAN 749
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 118 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 169
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
VG L R R+ H++ GS P + T++ D ND+ P F S+Y +
Sbjct: 206 VGDLDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVS 261
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
E + G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 262 ESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 304
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE---DQND 102
F +P T +L RA R H++ + +GS P + + ++V+ D+ND
Sbjct: 1260 FSLHPHTGELHTAASLIRAERP--HYVLTLSAHDQGSPPR----SASLQLLVQXVTDEND 1313
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N P+F S + +PED P G V A D DLG +++S+
Sbjct: 1314 NAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1354
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1062 ELYTLKVMAVSGSRAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1121
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1122 RVFATDRDSGPNGRLTYS 1139
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
V + ++DQND P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2235 VARATVHVQLQDQNDYAPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2282
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 76 NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ------YSLSIPEDVPVGTVVQVV 129
+ + GS P GT + I V D NDN+P F + + +P+ VP GT+V +
Sbjct: 1178 HVQDSGSPPRSTTGTVH--IAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTL 1235
Query: 130 SASDADLGVNSKLSWNELEPNG-LFS 154
A D D G N + + P LFS
Sbjct: 1236 QAKDPDEGENGTILYTLTGPGSELFS 1261
>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
Length = 3015
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2068 AHDGPHEGHANLTVLVEDVNDNAPTFSQSLYQVMMLEHTPPGSAILSVSATDRDSGANGH 2127
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2128 ISYHLASPGEGFSVD 2142
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E K++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1525 GTMRPLDREVEPAFKLQIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1583
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N ++ +
Sbjct: 1584 DAPSGTLLLQLQAHDPDDGDNGRVMY 1609
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + + +
Sbjct: 2298 PRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFT 2357
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2358 LSSGDPLGLFELD 2370
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P++ GT + + A D D G NS
Sbjct: 864 GSGIPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPQNTSPGTPIYTLRALDPDSGANS 923
Query: 141 KLSWNELE-PNGLFSSD 156
+++++ L +G+F+ D
Sbjct: 924 QVTFSLLAGGDGMFTVD 940
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 47 IANPTTRLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
++ + L N G L RAL EE + PL+ + VED+ND+
Sbjct: 1406 VSGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHT 1465
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
P F + SL +PE T+ ++ ASD D G+N +L + L +P+G F+ DL
Sbjct: 1466 PTFGNTHLSLEVPEGQDPQTLT-ILRASDPDKGLNGQLQYRILDGDPSGAFTLDL 1519
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + TL L + + + G P PLV + ++ ++D NDN P
Sbjct: 517 FSIDPTSGIITTAATLDYELEPQPQLIVLAT---DGGLP-PLVSSATVSVALQDVNDNEP 572
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 573 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGSFGLLSYS 612
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V L R R E H L V H GS P T T+ V D ND P FP +YS+ +
Sbjct: 1321 VRPLDREQRAE-HVLTVVALDH-GSPPRS--STQLLTVSVVDINDEAPAFPHQEYSVLLR 1376
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1377 ENSPPGTSLLTLKATDPDLGANGQVTYGGVSGESFSLDPNTGVLTTLR 1424
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2410 TVEVLDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGTFGRLQYSLLE 2464
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT----VVQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P VP + + + A D D
Sbjct: 1651 GAAAGPLSTTVPITITVRDVNDHAPTFPTSPLRLRLPRSVPSLSRPTLALATLRAEDRDA 1710
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1711 GANASI 1716
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 1974 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2029
Query: 147 LEPNG 151
L P+G
Sbjct: 2030 LSPSG 2034
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 659 GGLKSIVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGQLSY 718
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 719 HILAGNSPPLFALDAHSGLLTVAWPLARRAN 749
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD G
Sbjct: 118 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAG 169
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
VG L R R+ H++ GS P + T++ D ND+ P F S+Y +
Sbjct: 206 VGDLDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVS 261
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
E + G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 262 ESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSID 304
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QND++P L++ E+ P GT V
Sbjct: 1062 ELYTLKVMAVSGSRAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1121
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1122 RVFATDRDSGPNGRLTYS 1139
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
V + ++DQND P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2180 VARATVHVQLQDQNDYAPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2227
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 76 NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ------YSLSIPEDVPVGTVVQVV 129
+ + GS P GT + I V D NDN+P F + + +P+ VP GT+V +
Sbjct: 1178 HVQDSGSPPRSTTGTVH--IAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTL 1235
Query: 130 SASDADLGVNSKLSWNELEPNG-LFS 154
A D D G N + + P LFS
Sbjct: 1236 QAKDPDEGENGTILYTLTGPGSELFS 1261
>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
Length = 3575
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan;
AltName: Full=Protein flamingo; AltName: Full=Protein
starry night; Flags: Precursor
gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
Length = 3579
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|403264877|ref|XP_003924693.1| PREDICTED: cadherin-24 [Saimiri boliviensis boliviensis]
Length = 758
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1122
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T++ + + +G +PGP T I VED+NDN P F +Y + +PE+V V T +
Sbjct: 401 TKDRYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSKKRYVVQVPENVAVNTKI 460
Query: 127 QVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
V A+D D G N+K+ ++ + S ++R ++ I
Sbjct: 461 IQVEATDQDEGNNAKVHYS------IISGNIRGQFYI 491
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
G ++ A + + + V N K + G PL ++V+D NDN P+F + +
Sbjct: 871 GIIRIARKLDRENVPVYNLKAFAVDRGVPPLKAAVPIHVVVQDINDNAPVFEKDVLFIDV 930
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDL 157
E+ PVG+VV ++A+D D G N+++ + +E N +F+ DL
Sbjct: 931 EENSPVGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDL 978
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G T I V D N + P+F + Y +++ ED PVGT V +SA+D D G N+++++
Sbjct: 690 GTRYDTAQVFINVTDANTHRPVFQSANYQVTLSEDRPVGTTVMAISATDEDTGENARITY 749
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---N 145
T T+ V D ND++P+F ++Y +SI E+V VG V + A+D D N+ + + N
Sbjct: 315 ATSYLTVTVSDTNDHSPVFEQNEYRVSIRENVEVGFEVMTIRATDGDAPSNANMVYKIVN 374
Query: 146 ELEPNGLFSSDLR 158
+ N +F D R
Sbjct: 375 DDGVNSVFEIDSR 387
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T II+ D NDN P F Y ++ ED PV T V +SASD D N ++S+
Sbjct: 798 TAYVEIIILDANDNAPQFLRDMYQGTVLEDAPVFTSVLQISASDRDSSTNGRVSY 852
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 100 QNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-----ELEPNGLFS 154
Q + NP F + Y +S+PE+ P GT V V A+D D G +L ++ + N F
Sbjct: 218 QANTNPQFQLPNYQVSVPENEPKGTRVITVKATDPDDGEAGRLEYSMEAMLDSRSNAFFE 277
Query: 155 SDLR 158
DLR
Sbjct: 278 IDLR 281
>gi|402872809|ref|XP_003900294.1| PREDICTED: protocadherin beta-10 [Papio anubis]
Length = 810
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P P GT I+V D NDN P F + Y PE+
Sbjct: 208 LDKALDREEQGELSLTLTALDGGSP-PRSGTSTIGIVVLDVNDNAPQFAQALYETQAPEN 266
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G ++ VSA D D GVN+++S++ + S ++R + IN
Sbjct: 267 SPIGFLIVKVSAEDIDSGVNAEVSYSFFDA----SENIRTTFQIN 307
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 448 NITVLVSDVNDNAPAFTHTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLRPQ 506
>gi|326673327|ref|XP_003199841.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 795
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R ++ +++ T G P P GT N + + D NDN P+F S Y IPE+
Sbjct: 193 LQKALDREKQPVIRLTLTAVDGGKP-PRSGTVNIIVKIIDANDNIPVFTKSLYKARIPEN 251
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG + V ASDAD G+N ++ ++
Sbjct: 252 APVGASIITVQASDADEGLNGEIVYS 277
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + V D NDN P FP ++ + E+ +G V+ VSA D D+G N++++++
Sbjct: 431 PLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGAVLHTVSAVDPDVGDNARITYS 490
Query: 146 ELE 148
LE
Sbjct: 491 LLE 493
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN+P FP S L++ E VG + +A DAD+G+NS S+ +L N FS D
Sbjct: 120 VLDINDNSPTFPSSSLHLNVSEAAFVGERYALPNAFDADVGINSVKSY-KLSANEHFSLD 178
Query: 157 LR--------VEWVINRSVDQH 170
++ E V+ +++D+
Sbjct: 179 VQSGGEQSVSAELVLQKALDRE 200
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+ + P P C I + D NDN P V+ + ED P GT+V +V+ D D G
Sbjct: 318 QARDKGPLPRAAHCKVLIEIMDVNDNIPEISVTSLVNVVNEDSPKGTMVGLVTVKDDDSG 377
Query: 138 VNSKLSWNELE 148
N + L+
Sbjct: 378 ENGSVRLKILD 388
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPEDVP----VGTVVQVVSASDADLGVN 139
PL + V D+NDN+P + P S+ E++P G V + A DAD G N
Sbjct: 540 PLSSNVTVNVFVLDENDNSPAILAPYSELGSVNTENIPYSAEAGYFVAKIRAVDADSGYN 599
Query: 140 SKLSWNELEPNG 151
+ LS++ EP G
Sbjct: 600 ALLSYHISEPKG 611
>gi|296192969|ref|XP_002744301.1| PREDICTED: protocadherin beta-2 isoform 1 [Callithrix jacchus]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P GT I V D NDN P F Y + +PED
Sbjct: 198 LDRALDREEQPEIRLTLTALDGGTP-PKSGTALVRIEVVDINDNIPEFAKLLYEVQVPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PVG+ V VSA D D+G N ++S+
Sbjct: 257 SPVGSQVATVSARDLDIGTNGEISY 281
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
++ FS A T RL G L + + ++ + ++ G L GTC + V
Sbjct: 280 SYAFSQASEDIRKTFRLSAKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQV 339
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
D NDN P +S + IPE++ T++ V S SD D G N ++
Sbjct: 340 MDLNDNPPELTMSTLTNQIPENLQ-DTIIAVFSVSDPDSGDNGRM 383
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
>gi|109079047|ref|XP_001091889.1| PREDICTED: protocadherin beta-14 isoform 2 [Macaca mulatta]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 182 IPDSSDRKIYPELVLDRALD 201
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N+ ++++ L
Sbjct: 436 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNALVTYSLL 491
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ ++ G L G C + V D NDN P +S + IPE+ T+V + S D D G N
Sbjct: 320 QATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENAS-ETLVALFSVVDQDSGDN 378
Query: 140 SKL 142
++
Sbjct: 379 GRM 381
>gi|14270508|ref|NP_115272.1| protocadherin gamma-B7 isoform 2 precursor [Homo sapiens]
gi|5457094|gb|AAD43783.1|AF152523_1 protocadherin gamma B7 short form protein [Homo sapiens]
gi|119582348|gb|EAW61944.1| hCG1982215, isoform CRA_w [Homo sapiens]
Length = 808
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G+N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTINIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDQDSGENGEVRCS 385
>gi|410266136|gb|JAA21034.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|302564429|ref|NP_001181814.1| protocadherin beta-13 precursor [Macaca mulatta]
Length = 753
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREAEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P+G +V VSA+D D GVN ++S++ + + S +V+
Sbjct: 256 SPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVD 296
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N ++S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGEISCS 385
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNITVLVADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|109079045|ref|XP_001091651.1| PREDICTED: protocadherin beta-13-like isoform 1 [Macaca mulatta]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREAEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P+G +V VSA+D D GVN ++S++ + + S +V+
Sbjct: 256 SPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVD 296
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N ++S +
Sbjct: 362 P-ETVVALFSVSDLDSGENGEISCS 385
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 429 PMLKTQLNITVLVADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 145 NELEPN 150
+ L P
Sbjct: 489 SLLPPQ 494
>gi|73949397|ref|XP_849328.1| PREDICTED: protocadherin gamma-A3 [Canis lupus familiaris]
Length = 871
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 61 LKRALRTEEHWL-KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL E+ + ++ G NP L G +IV D NDN P+F S+Y +S+ E+
Sbjct: 196 LERALDREQKKIHQLVLIASDGGNP-VLSGNLCIRVIVLDANDNPPVFTQSEYQVSVQEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+PVGT + V+A+D D G N+++S+
Sbjct: 255 LPVGTTLLTVNATDPDEGFNAQVSY 279
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP PL + + V D NDN P F + YS I E+ P G + V+ D D N+
Sbjct: 427 GGNP-PLSTNTHIIVHVADINDNPPAFSQATYSAYILENNPRGASIFCVTTQDPDSIHNA 485
Query: 141 KLSWNELE 148
+++ +E
Sbjct: 486 HITYALME 493
>gi|66571289|ref|NP_001019302.1| protocadherin beta-14 precursor [Pan troglodytes]
gi|62510887|sp|Q5DRD5.1|PCDBE_PANTR RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFLRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFYIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 182 IPDSSDRKIYPELVLDRALD 201
>gi|354477312|ref|XP_003500865.1| PREDICTED: cadherin-10 [Cricetulus griseus]
Length = 788
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP + L + E PVGT V
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAVGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V A+DAD+G N+++ + ++ +G D+ E
Sbjct: 291 VKATDADMGKNAEVDYRIIDGDGTDMFDIITE 322
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I +ED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 363 GPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 412
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ GS P L GT IIV+D NDN P F +Y +IPED P GT
Sbjct: 2325 ETKEHFVLTVTATDSGS-PA-LTGTGTINIIVDDVNDNVPTFASKRYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNS 140
V +V+ASDAD N+
Sbjct: 2383 VLLVNASDADASTNA 2397
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R +E++ V + GS P PL + + + V D NDN
Sbjct: 2406 SQFTINPSTGQIITSALLDR--EAKENYTLVVVSSDAGS-PEPLSSSTSVLVTVTDVNDN 2462
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2463 PPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGANSELYYS 2504
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN PIF S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPIFGSSHYQAGVPEDAAVGSSVLQVAAADADEGTNADIRY 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T V D NDN P
Sbjct: 1889 FFLNPVTGVFN----LTRVLDYEAQQYYILTVRAE--DGGGQFTTIRVYFNVLDVNDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E +P+G+ V V + +DAD G+NS+L+++
Sbjct: 1943 IFSLNSYSTSLMETLPLGSTVLVFNVTDADDGINSQLAYS 1982
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 41 FSIAKFIANPTTRLYKNVGT--LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
+SI+ + T + N G+ L + L E L N K P T + I V
Sbjct: 1352 YSISGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVR 1411
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
D NDN P FP SI E+VP+GT V V+A D D +N KLS+
Sbjct: 1412 DFNDNPPSFPPGDIFKSIVENVPIGTSVISVTAHDPDADINGKLSY 1457
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL--S 143
PL T N T+I+ED NDN P+F + Y+ E+ G+ V V+A D D G N ++ S
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVNAVDKDFGPNGEVRYS 1138
Query: 144 WNELEPN 150
+ ++P+
Sbjct: 1139 FERVQPD 1145
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I + D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T ++L V+ T +GS P T +I++ D ND P+F +S YS+++PE++
Sbjct: 2221 KTPTYFLTVQATD-RGSTP--RTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPS 2277
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
T++QV+ A D D G NS++S+ NE L +S +LRV ++R +H
Sbjct: 2278 TILQVL-ARDDDQGSNSQISYVLFGGNEDNAFTLSASGELRVTQSLDRETKEH 2329
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C T+ V D NDN+P+F +Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3176 GYCTVTVNVIDVNDNSPVFTPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3231
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + N L
Sbjct: 474 VFTQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNEL 520
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L K KG NP PL IIV ++N + P F S S +IPE +G +V+
Sbjct: 3053 QNFLITVTAKDKG-NP-PLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRT 3110
Query: 129 VSASDADLGVNSKLSW 144
VSA D D +N + +
Sbjct: 3111 VSARDRDAAMNGLIRY 3126
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 665 GSPPQSSMARINVSLL--DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGPNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + + L P
Sbjct: 2034 TAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNP 2092
Query: 150 NG 151
G
Sbjct: 2093 LG 2094
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2855 STDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSATDPDEGSNGQVFYFIKSQ 2914
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2915 SEYFRINATTGEIFNKQVLKYQN 2937
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNPIF + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2134 LSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGI 2193
Query: 147 LEPNGLFSSDLRVEWV 162
+ G + + R++ V
Sbjct: 2194 V--GGNVNQEFRIDSV 2207
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTALDADEGANALVTY 1777
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
T+ V D NDN P+F Y +++ E PV + V ASD D G N +++++ E N
Sbjct: 983 TVCVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEVAYSIAEGNA 1040
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R E LKV K+ GS G + + V D ND P+F ++ Y++ I E
Sbjct: 3359 GPLDRE-REERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFSLNIYNVQISE 3415
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3416 GVPIGTHVTFVSAFDSD 3432
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNN 104
F N T +++ L R + ++ L ++++ KGS P T II + D+NDN
Sbjct: 2716 FSINHATGEIRSIRPLDRE-KVSQYILTIKSSD-KGS---PSQSTSVKVIINILDENDNA 2770
Query: 105 PIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
P F SQ +S +PE+ P+G V V+ SD D+GVN+
Sbjct: 2771 PRF--SQIFSAHVPENSPLGYTVTRVTTSDEDVGVNA 2805
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ---YSL 114
G L R L + L V N + P V + + D ND P+F SQ Y +
Sbjct: 537 AGGLDRELAS----LIVLNISARDHGVHPKVSYAQLVVTLLDVNDEKPVF--SQPGGYDV 590
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
S+ E+ P GT + V+ A+D DLG N + S E E
Sbjct: 591 SVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAE 626
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L T T IV D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2954 TSSDRGNPSLLSETTVTVNIV-DSNDNAPQFLKLKYFTPVTKNVKVGTKLIKVAAVDDKD 3012
Query: 136 LGVNSKLSW 144
G+NS++ +
Sbjct: 3013 FGLNSEVEY 3021
>gi|380791999|gb|AFE67875.1| protocadherin gamma-B7 isoform 1 precursor, partial [Macaca
mulatta]
Length = 353
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP GT + V A+D D G+NS+++++ L
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFL 282
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDINDHAPQFQKDEINLEISESVSPGMGTILESAEDPDISMNS-LSKYQLSPNEHFS 179
>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
terrestris]
Length = 3597
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K VG L R E K T H P + I+V D NDN
Sbjct: 1972 KFSLDKETGVLKTVGQLDR-----ETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDN 2026
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F + YS ++PEDV VGT+V V A+D D+G+N K+ +
Sbjct: 2027 APKFTMQTYSATLPEDVEVGTLVTKVHATDNDIGINRKIRY 2067
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 39 FTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
FTFSI F+ N TT L G EH L+V T P L T
Sbjct: 91 FTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEV--TVRDDGRPS-LSSTTR 147
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D ND+ P F Y++ IP + V A+D D+G N K+ ++
Sbjct: 148 VVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLANDKDIGDNGKIQYS 200
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y SI ED +G
Sbjct: 2201 RARDYFLTIQAID--GGIP-PLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 2257
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D N +S+
Sbjct: 2258 VTQVFANDLDSEENGNVSY 2276
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V L R L+ + H + V S+P PL ++ V D+ND+ P F + Y +S+
Sbjct: 1673 VKPLDRELK-DNHLIGV--LAETDSSP-PLTALAEISLQVLDENDHAPKFESNPYGISLA 1728
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
E++ GT + + A D DLG N ++ ++ F SD+
Sbjct: 1729 ENIEEGTSILKIIAHDEDLGSNGEVRYS-------FGSDI 1761
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T + +K L E+ K N +N CN + V D+NDN P
Sbjct: 621 FFMNPSTGII----VIKNELDYEK--TKFYNLTVAATNMASAKAHCNVIVHVLDRNDNAP 674
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE--PNGLFSSD 156
F + Y+ I E +G++V V+ A DAD +N+ L+++ +E P F D
Sbjct: 675 RFLQATYNGEISEGASIGSLVLTNSSTPLVIKAEDADSELNALLNYDIVEDLPRKYFHID 734
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LKR+L E H L T + + V D NDN P F Y+ S+ E
Sbjct: 1259 LKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHA 1318
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
G V VVSASD D V+ KL++
Sbjct: 1319 ERGQFVTVVSASDPDY-VDDKLTY 1341
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNS 140
I + D NDN P+F +S Y+ + ED P+G TV+Q V +DAD+ N+
Sbjct: 2332 IEILDANDNPPLFSLSNYTAVVQEDKPLGHTVLQFV-VTDADIEPNA 2377
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 38/99 (38%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ PT+ + G E + L VE P V + + D NDN P
Sbjct: 934 FVIGPTSGAIRTTGIRFDREVCEHYELIVEAKSQMPGKEKPRVAHVIVNVTILDINDNCP 993
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y + D G V+ V A D D G N ++ +
Sbjct: 994 MFVNLPYYAVVSVDAQKGDVITKVHAVDMDSGDNGEVRY 1032
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L+ + + V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 2114 LMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYS 2172
>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
Length = 3570
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLGSPD 948
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEIGVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V V+ASD D+G+N ++ +
Sbjct: 1006 SFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAVFHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDPRTGWV 746
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 407 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 462
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 463 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 501
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT---VVQVVSASDADLGVNSKLSW 144
T + + V D NDN P F Y++ +PED GT V + A+DAD G N+ + +
Sbjct: 563 ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY 621
>gi|18087735|ref|NP_291053.1| protocadherin gamma-B2 precursor [Mus musculus]
gi|13876348|gb|AAK26094.1| protocadherin gamma B2 [Mus musculus]
gi|32451631|gb|AAH54557.1| Protocadherin gamma subfamily B, 2 [Mus musculus]
Length = 928
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LKR L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 185 PDGRKYPEL-ILKRFLDREEHNFHQLVLTAVDGGDP-PRSGTTQIRIQVTDINDNPPMFS 242
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVD 168
+S+++ EDVP G V V+A+D D GVN+++++ + D +VE + N +D
Sbjct: 243 QDVFSVTLREDVPPGFSVLQVTATDQDEGVNAEITY------AFHNVDEQVERIFN--LD 294
Query: 169 QHTNK 173
+ T +
Sbjct: 295 KRTGE 299
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL T+ + D NDN P+F + Y + + E+ P GT + VSASD DLG N +S+
Sbjct: 430 PLSSNVIITLHISDVNDNAPVFHQASYLVHVAENNPPGTSIAQVSASDPDLGSNGLISYS 489
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 490 IIASDLEPRALSS 502
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P+GTV+ ++ D D G N
Sbjct: 319 EAKDPGDLASHCSIQVKILDENDCVPEVIVTSVFTPLPEDSPLGTVIALIKTRDRDSGEN 378
Query: 140 SKLSWNELEPNGLF---SSDLRVEWVINRSVDQHT 171
+ + L G SS + V +R++D+
Sbjct: 379 GDVYCHVLGNEGFVLKSSSKNYYKLVTDRTLDREA 413
>gi|354488005|ref|XP_003506161.1| PREDICTED: cadherin-24 [Cricetulus griseus]
Length = 515
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLKAQDPDLGDNALMAYSILDGEG 303
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|296483734|tpg|DAA25849.1| TPA: cadherin 24, type 2 [Bos taurus]
Length = 781
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|62510877|sp|Q5DRC4.1|PCDB9_PANTR RecName: Full=Protocadherin beta-9; Short=PCDH-beta-9; Flags:
Precursor
Length = 797
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRS 166
PVG+ + VSA DAD GVN+++S++ + S D+ + IN S
Sbjct: 255 SPVGSRIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQINPS 297
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ V VS +D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHVGSVSPTDGDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|127138695|ref|NP_001076039.1| protocadherin gamma-B7 precursor [Pan troglodytes]
gi|62510858|sp|Q5DRA5.1|PCDGJ_PANTR RecName: Full=Protocadherin gamma-B7; Short=PCDH-gamma-B7; Flags:
Precursor
gi|410352059|gb|JAA42633.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 929
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|397518430|ref|XP_003829390.1| PREDICTED: protocadherin beta-14 [Pan paniscus]
Length = 762
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLFLRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFYIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 182 IPDSSDRKIYPELVLDRALD 201
>gi|426350340|ref|XP_004042735.1| PREDICTED: protocadherin gamma-B7 [Gorilla gorilla gorilla]
Length = 808
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAHVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ VNS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISVNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDRDSGENGEVRCS 385
>gi|11128027|ref|NP_061750.1| protocadherin gamma-B7 isoform 1 precursor [Homo sapiens]
gi|37999828|sp|Q9Y5F8.1|PCDGJ_HUMAN RecName: Full=Protocadherin gamma-B7; Short=PCDH-gamma-B7; Flags:
Precursor
gi|5456975|gb|AAD43730.1| protocadherin gamma B7 [Homo sapiens]
gi|30354254|gb|AAH51788.1| Protocadherin gamma subfamily B, 7 [Homo sapiens]
gi|119582327|gb|EAW61923.1| hCG1982215, isoform CRA_b [Homo sapiens]
Length = 929
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G+N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTINIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDQDSGENGEV 382
>gi|380794353|gb|AFE69052.1| protocadherin beta-14 precursor, partial [Macaca mulatta]
Length = 792
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 190 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 248
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 249 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 289
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 430 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 485
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 117 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 175
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 176 IPDSSDRKIYPELVLDRALD 195
>gi|311250345|ref|XP_003124107.1| PREDICTED: protocadherin gamma-A2-like [Sus scrofa]
Length = 825
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT +IV D NDN P+F +Y +S+PE+ PVGT + V+A+DAD G N+++++
Sbjct: 223 GTSRIRVIVLDANDNAPVFTQPEYRVSVPENTPVGTRILTVTATDADEGYNAQVAY 278
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ ++V D NDN P F ++ + S+
Sbjct: 301 TITKSLDYEDAKLHEIDIEAQDGPG-----LLTRTKVIVMVLDVNDNAPEFYMTSATSSV 355
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PED P GTV+ + + D D G N+ ++ +
Sbjct: 356 PEDSPPGTVIALFNVHDRDSGQNAFITCS 384
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + SA DAD+G N+ L EL N FS D
Sbjct: 122 ITDINDNAPRFGVEELELKISETTTPGFRIPLKSAHDADVGENT-LQKYELNSNDHFSLD 180
Query: 157 LR 158
+R
Sbjct: 181 VR 182
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L + + V D NDN P F + YS IPE+ P G + ++A D D
Sbjct: 422 TAKDGGNPS-LSTDAHVLLQVADINDNPPTFLHTSYSAYIPENNPRGASIFSMTAHDPDS 480
Query: 137 GVNSKLSWNELE 148
N+ +++N E
Sbjct: 481 DDNAHVTYNVAE 492
>gi|242012523|ref|XP_002426982.1| hypothetical protein Phum_PHUM288410 [Pediculus humanus corporis]
gi|212511211|gb|EEB14244.1| hypothetical protein Phum_PHUM288410 [Pediculus humanus corporis]
Length = 1635
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL N TI ++DQNDN P+F +Y IPE+V GTV+ V A+D D GV K+ +
Sbjct: 464 PLESRANVTIYLDDQNDNPPVFLQEKYEAEIPENVTAGTVITQVQANDVDTGVFGKVFYT 523
Query: 146 EL 147
L
Sbjct: 524 NL 525
>gi|194376270|dbj|BAG62894.1| unnamed protein product [Homo sapiens]
Length = 549
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF- 153
+ V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFY 179
Query: 154 -----SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 180 IKIPDSSDRKIYPELVLDRALD 201
>gi|410266126|gb|JAA21029.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|380788713|gb|AFE66232.1| cadherin-24 isoform 2 precursor [Macaca mulatta]
gi|383411007|gb|AFH28717.1| cadherin-24 isoform 2 [Macaca mulatta]
Length = 781
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|332234751|ref|XP_003266567.1| PREDICTED: protocadherin gamma-A2 [Nomascus leucogenys]
Length = 823
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 61 LKRALRTEE----HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
L+ AL EE H L V + G +P L GT + V D NDN P+F +Y +S+
Sbjct: 196 LELALDREEEAVHHLLLVAS---DGGDP-ELSGTSRICVKVLDVNDNPPVFTQPEYRISV 251
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
PE+ PVGT + V+A+DAD G N+++++
Sbjct: 252 PENTPVGTRILTVTATDADEGYNAQVAY 279
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 55 YKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
Y+ V T RAL E+ + + G NP L + + V D NDN P F + YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLIAKDGGNPS-LSTDAHILLQVADINDNAPAFSRTSYS 458
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
IPE+ P G + V+A D D N+ ++++ E
Sbjct: 459 TYIPENNPRGASIFSVTAHDPDSNDNAHVTYSFAE 493
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + +A DAD+G N+ L L PN FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENA-LQKYALNPNDHFSLD 181
Query: 157 LR 158
+R
Sbjct: 182 VR 183
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
PG L T + V D NDN P F ++ + S+ ED P GT++ + + D D G N+
Sbjct: 325 PGLLTRT-KVIVTVLDVNDNAPEFYMTSATSSVSEDSPPGTIIGLFNVHDRDSGQNA 380
>gi|269914107|ref|NP_001013033.2| protocadherin beta-9 precursor [Pan troglodytes]
Length = 797
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P GT I+V D NDN P F + Y PE+
Sbjct: 196 LDKALDREEQEELSLTLTALDGGSPS-RSGTSTIRIVVLDVNDNAPQFAQALYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRS 166
PVG+ + VSA DAD GVN+++S++ + S D+ + IN S
Sbjct: 255 SPVGSRIVKVSAGDADSGVNAEVSYSFFDA----SEDILTTFQINPS 297
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ V VS +D D G N++++++ L P
Sbjct: 438 TLQVSDVNDNAPAFTQTSYTLFVRENNSPALHVGSVSPTDGDSGTNAQVTYSLLPPQ 494
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
G L C I V D NDN P +S S S+ E+ P G V+ V D D G N K
Sbjct: 325 GGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGK 380
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+
Sbjct: 871 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINA 930
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 931 QITYSLNEESINGLSSPD 948
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G NP L T + I V D NDN P
Sbjct: 950 FTINPQTGAIITSAPLDRET-TSGYLLTV--TAKDGGNPS-LSDTTDVEISVTDVNDNAP 1005
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 1006 AFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 1044
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL T I +ED ND+
Sbjct: 1054 GSFVIDPTSGTIRTNKGLDRESVAIYHLTAI--AVDKGS--PPLSSTVEVQIRLEDVNDS 1109
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1110 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1151
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++S+ +E + N +
Sbjct: 679 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEISYSISERDDNFPLA 738
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 739 VDSRTGWV 746
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 409 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATD--DSFP-PRSGTTTLQVNVLDCNDHSP 464
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 465 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 503
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 746 VQTIKPLDREEQSRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPSFNPKYYEANVG 804
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 805 EDQPPGTPVTTVTATDPD 822
>gi|344242611|gb|EGV98714.1| Cadherin-24 [Cricetulus griseus]
Length = 482
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 202 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 261
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 262 GRLKAQDPDLGDNALMAYSILDGEG 286
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 112 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 171
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 172 VYTVLDGLPFFSVD 185
>gi|47209331|emb|CAF93466.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1151
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
+ R Y + K R ++ L++ T G +P GT + V D NDN P+F S
Sbjct: 183 SNRKYCELLLDKELDREDKQELQLLLTAVDGGSP-QRSGTVVIHVTVLDANDNAPVFSQS 241
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSDLRVEWV-INRS 166
Y S+PE+ P+ T+V VSA+DAD GVNS++++ + LE +F D + V +N +
Sbjct: 242 VYKTSLPENSPLDTLVITVSAADADEGVNSEITYGFDHVLEDENVFLLDTKTGVVRVNGA 301
Query: 167 VD 168
+D
Sbjct: 302 ID 303
>gi|410306228|gb|JAA31714.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
gi|410352063|gb|JAA42635.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 927
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|390459333|ref|XP_003732279.1| PREDICTED: protocadherin beta-15-like [Callithrix jacchus]
Length = 787
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ L++ T G + P GT ++V D NDN P+F + Y + +PE+ P+G++
Sbjct: 202 REEQAELRLTLTALDGGST-PRSGTAQILVLVLDANDNAPVFAQALYEVQVPENSPIGSL 260
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA D D G N ++S++
Sbjct: 261 VVKVSARDLDTGTNGEISYS 280
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ ++ V D NDN+P +S + IPE+ P T V + D D G N
Sbjct: 320 EASDGGGLSGKCSVSVKVLDVNDNSPELTISSLTSPIPENSP-ETEVALFRIRDRDSGEN 378
Query: 140 SKLSWN 145
K++ +
Sbjct: 379 GKMTCS 384
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++V D ND++P FP + +L IPE GTV + A D D+G N+ +++ + PN F
Sbjct: 121 LLVRDINDHSPEFPEKEITLKIPEISSPGTVFPLKKAWDLDVGSNNVQNYS-ISPNSHFH 179
Query: 155 SDLRVE 160
R++
Sbjct: 180 VSTRIQ 185
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+ + E+ + VSA+D D G N++++++ L P
Sbjct: 438 TVQVSDVNDNAPAFTQTSYTFFVRENNSPALHIGTVSATDRDSGTNAQVTYSLLPPQ 494
>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
Length = 3584
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+GVN+
Sbjct: 870 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNA 929
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 930 QITYSLNEESINGLGSPD 947
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L T I +ED ND+
Sbjct: 1053 GSFVIDPTSGTIRTNKGLDRESVAVYHLTAI--AVDKGSPP--LSSTVEVQIRLEDVNDS 1108
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P FP + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1109 PPTFPSDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1150
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L T + I V D NDN P F Y SI ED VGT V V+ASD D+
Sbjct: 977 TAKDGGNPS-LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDV 1035
Query: 137 GVNSKLSW 144
G+N ++ +
Sbjct: 1036 GLNGRIKY 1043
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 678 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA 737
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 738 VDPRTGWV 745
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 406 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 461
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 462 SFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 500
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 745 VQTIKPLDREEQARFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPAFNPKYYEANVG 803
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 804 EDQPPGTPVTTVTATDPD 821
>gi|410306226|gb|JAA31713.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 927
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|170032327|ref|XP_001844033.1| protocadherin gamma B4 [Culex quinquefasciatus]
gi|167872319|gb|EDS35702.1| protocadherin gamma B4 [Culex quinquefasciatus]
Length = 2020
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+ +G+ P P T TI ED NDNNP F QY L++ ED PVG + V A+D D G
Sbjct: 902 RDQGTPPQPSTATIQLTI--EDSNDNNPEFYPKQYFLALSEDTPVGRSILQVQATDRDEG 959
Query: 138 VNSKLSWNELE-PNGLFSSD 156
N+ +S+ + +G+FS D
Sbjct: 960 ANAAISYEIVSGGDGMFSID 979
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
L +E T +P L + T+ +ED ND+ P+F + Y S+ E +PV + ++A
Sbjct: 1208 LTLEITASDSGDP-QLSTKSSVTVTIEDVNDHTPVFDHTSYETSLLESMPVNSRFFALAA 1266
Query: 132 SDADLGVNSKLSWNELEPN 150
SDAD+G+N ++S+ +E N
Sbjct: 1267 SDADIGMNQRISYAIIEGN 1285
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 60 TLKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
TL +AL E K+ H S L + TI V D+ND+ P F + +SI E
Sbjct: 1513 TLAKALDRETVSMYKLTIVAHDASMQNRLSASTTVTIEVLDENDDAPEFTQTHSQISINE 1572
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
P+GT + A+D DLGVNS+++++
Sbjct: 1573 TTPIGTELIRFRATDMDLGVNSQITFS 1599
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 37 PAFTFSIAKFIANPTTRLY----KNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
P F +A NP+ +Y + +G L R R + L + + G P P G
Sbjct: 419 PDEKFRLA-VTTNPSGDVYYLHLETIGKLDRETRGS-YTLNI--SAKDGGTP-PKFGYLQ 473
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ V D NDN PIF S Y +S+ E V GT V V ASD DLG NSK+++
Sbjct: 474 VNVTVLDVNDNPPIFDHSDYIVSLNESVLPGTPVLQVMASDNDLGDNSKITY 525
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL------ 142
T + I V D ND+ P+F S+YS + E P GT V ++A+D D GVN+++
Sbjct: 698 ATAHLIIHVNDVNDHEPVFEKSEYSTVLSELAPPGTYVASITATDEDTGVNAQIFYDFVS 757
Query: 143 ----SWNELEP-NGLFSSDLRVEWVINRSVD 168
W +++P +GL ++ +++ +N +++
Sbjct: 758 GNNNQWFKIDPSSGLITTQAQLDREVNGNIE 788
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELE 148
T N TII D NDN P F +++PE+ VG + + A D D G NS++S++
Sbjct: 1123 TVNITII--DLNDNAPTFLHDHDEINLPENTAVGQEIYLSKAKDLDSGANSRISYSLSYN 1180
Query: 149 PNGLF 153
P GLF
Sbjct: 1181 PQGLF 1185
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 39 FTFSIAK------FIANPTTR-LYKNVGTLKRALRTEE-HWLKVENTKHKGSNPGPLVGT 90
TFSIA F +PT+ LY L R L E+ + T G NP
Sbjct: 1596 ITFSIAAGNRRDTFHIDPTSGYLY-----LHRLLDYEDTQSYSLNITASDGGNP-----R 1645
Query: 91 CNTTII----VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+TTI+ V D NDN P FP + I E +P+ T + V+A D D G+N K+++
Sbjct: 1646 LSTTILFMVNVIDSNDNPPSFPNTAIVRQIREGIPLKTPIVTVTAEDPDSGLNGKVTY 1703
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D+NDN P F S + S+ E+ P T V ++A D D+G N++L + F+ D
Sbjct: 1336 VIDENDNPPQFTNSTFIFSVAENEPADTFVGKLTAVDRDIGRNAELIYMLSSKQDDFTID 1395
Query: 157 LR 158
R
Sbjct: 1396 SR 1397
>gi|431917280|gb|ELK16816.1| Cadherin-12 [Pteropus alecto]
Length = 656
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 78 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFH 137
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 138 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 175
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T + V D D P+F
Sbjct: 189 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSVGPFKDTATVKVSVLDV-DEPPVFS 247
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 248 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 276
>gi|440906308|gb|ELR56584.1| Cadherin-24 [Bos grunniens mutus]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|9256608|ref|NP_061757.1| protocadherin beta-14 precursor [Homo sapiens]
gi|13431380|sp|Q9Y5E9.1|PCDBE_HUMAN RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
gi|5457035|gb|AAD43754.1|AF152493_1 protocadherin beta 14 [Homo sapiens]
gi|14009453|gb|AAK51612.1|AF217744_1 protocadherin-beta14 [Homo sapiens]
gi|71043456|gb|AAH99728.1| Protocadherin beta 14 [Homo sapiens]
gi|119582373|gb|EAW61969.1| protocadherin beta 14 [Homo sapiens]
gi|168277588|dbj|BAG10772.1| protocadherin beta 14 precursor [synthetic construct]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+++ D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQ 494
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF- 153
+ V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFY 179
Query: 154 -----SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 180 IKIPDSSDRKIYPELVLDRALD 201
>gi|410266138|gb|JAA21035.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V +G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSLGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C + V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 368 LFKTRDRDSGENGEV 382
>gi|296214540|ref|XP_002753674.1| PREDICTED: cadherin-24 [Callithrix jacchus]
Length = 781
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|148678189|gb|EDL10136.1| mCG133388, isoform CRA_s [Mus musculus]
Length = 928
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LKR L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 185 PDGRKYPEL-ILKRFLDREEHNFHQLVLTAVDGGDP-PRSGTTQIRIQVTDINDNPPMFS 242
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVD 168
+S+++ EDVP G V V+A+D D GVN+++++ + D +VE + N +D
Sbjct: 243 QDVFSVTLREDVPPGFSVLQVTATDQDEGVNAEITY------AFHNVDEQVERIFN--LD 294
Query: 169 QHTNK 173
+ T +
Sbjct: 295 KRTGE 299
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL T+ + D NDN P+F + Y + + E+ P GT + VSASD DLG N +S+
Sbjct: 430 PLSSNVIITLHISDVNDNAPVFHQASYLVHVAENNPPGTSIAQVSASDPDLGSNGLISYS 489
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 490 IIASDLEPRALSS 502
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P+GTV+ ++ D D G N
Sbjct: 319 EAKDPGDLASHCSIQVKILDENDCVPEVIVTSVFTPLPEDSPLGTVIALIKTRDRDSGEN 378
Query: 140 SKLSWNELEPNGLF---SSDLRVEWVINRSVDQHT 171
+ + L G SS + V +R++D+
Sbjct: 379 GDVYCHVLGNEGFVLKSSSKNYYKLVTDRTLDREA 413
>gi|403306547|ref|XP_003943790.1| PREDICTED: cadherin-9 [Saimiri boliviensis boliviensis]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGQNAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|358413994|ref|XP_002700603.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-24 [Bos taurus]
gi|359069093|ref|XP_002690554.2| PREDICTED: cadherin-24 [Bos taurus]
Length = 799
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 237 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 296
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 297 GRLRAQDPDLGDNALMAYSILDGEG 321
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 147 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 206
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 207 VYTVLDGLPFFSVD 220
>gi|344242175|gb|EGV98278.1| Cadherin-10 [Cricetulus griseus]
Length = 723
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P FP + L + E PVGT V
Sbjct: 166 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAVGS 225
Query: 129 VSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
V A+DAD+G N+++ + ++ +G D+ E
Sbjct: 226 VKATDADMGKNAEVDYRIIDGDGTDMFDIITE 257
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 83 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 142
Query: 152 LFS 154
FS
Sbjct: 143 YFS 145
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I +ED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 298 GPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 347
>gi|68532427|gb|AAH98144.1| PCDHB14 protein, partial [Homo sapiens]
Length = 797
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 195 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 254 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 294
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T+++ D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 435 NITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQ 493
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF- 153
+ V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 120 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFY 178
Query: 154 -----SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 179 IKIPDSSDRKIYPELVLDRALD 200
>gi|32880206|ref|NP_071923.2| cadherin-24 isoform 1 precursor [Homo sapiens]
gi|38257450|sp|Q86UP0.1|CAD24_HUMAN RecName: Full=Cadherin-24; Flags: Precursor
gi|30171998|gb|AAP20591.1| cadherin-24 variant [Homo sapiens]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
Length = 3197
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT + R E ++ G PG L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1707 GTRRPLDREVEPAFQLRIEARDGGQPG-LSATVLVTVTVLDANDHAPAFPVPAYSVEVPE 1765
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N +++
Sbjct: 1766 DAPAGTLLMQLQAHDPDAGANGHVTY 1791
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2250 AHDGPHKGQANLTVLVEDVNDNAPTFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2309
Query: 142 LSWNELEPNGLFSSD 156
+S++ P F+ D
Sbjct: 2310 ISYHLASPAEGFNVD 2324
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNG 151
T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + + + + +P G
Sbjct: 2488 TVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFTLSSGDPLG 2547
Query: 152 LFSSD 156
LF D
Sbjct: 2548 LFELD 2552
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 864 GSGVPPAFAAARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRAQDPDSGVNS 923
Query: 141 KLSWNELE-PNGLFSSD 156
++++ L +G F+ D
Sbjct: 924 RITFTLLAGGDGAFTVD 940
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2592 TVEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2646
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + +P PL+ + +ED+ND+ P F + SL +PE
Sbjct: 1604 TLRALDREEQEEINLTVYARDRGSP-PLLTHVTVRVAIEDENDHAPTFGNAHLSLEVPEG 1662
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSDL 157
T+ + ASD D+G N +L + + +P+G F DL
Sbjct: 1663 QDPQTLT-TLRASDPDVGANGQLQYRIVDGDPSGAFVLDL 1701
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1492 RLHSSTGALSVVRPLDREQRAEHILTVVASDH-GSPPRS--STQLLTVSVVDVNDEAPAF 1548
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
YS+ + E+ P GT + + A+D DLG N ++++
Sbjct: 1549 QQQDYSVLLRENSPPGTSLLTLRATDPDLGPNGQVTY 1585
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + ++ ++D NDN P
Sbjct: 517 FSIDPTSGIITTAASLDYELEPRPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 572
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE G+ V+A+DAD G LS++
Sbjct: 573 QFQRTFYNASLPEGTQPGSCFLQVTATDADSGPFGLLSYS 612
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2156 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2211
Query: 147 LEPNG 151
L P+G
Sbjct: 2212 LSPSG 2216
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 659 GGLKSMVYVKVFVSDENDNPPQFYPWEYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSY 718
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 719 HILAGNSPPLFALDEHSGLLTVAWPLARRAN 749
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1833 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALGTLRAEDRDA 1892
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1893 GANASI 1898
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + I V D NDN+P
Sbjct: 1150 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDGGSPPHSTTGTVH--IAVLDLNDNSP 1205
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1206 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1261
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
P T T+ V D ND+ P FP + +L IPE +GT + A DAD G
Sbjct: 118 PDGATVEVTVRVADINDHAPAFPQVRGALQIPEHTALGTRYPLEPARDADAG 169
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2371 LKDQNDHAPSFTLPFYRVAVSEDLPPGSTLLTLEATDAD 2409
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LK+ + G T + + +QND++P LS+ E+ P GT V
Sbjct: 1062 ELYTLKIMAVSGSRAELGQQTSTATVRVSILNQNDHSPRLSEEPTFLSVAENQPPGTSVG 1121
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1122 QVFATDRDSGPNGRLTYS 1139
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 784 PIFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 836
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFS 154
D ND+ P F S+Y + E + G+ V V ASDAD G N +++ + E +G F+
Sbjct: 243 DINDHAPAFNQSRYHAVVSETLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFT 302
Query: 155 SDLR 158
D R
Sbjct: 303 IDPR 306
>gi|291387477|ref|XP_002710169.1| PREDICTED: protocadherin alpha 6 [Oryctolagus cuniculus]
Length = 1381
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P+ G C + V D NDN P ++ SL I ED PVGTV+ +VS SD D G N ++S
Sbjct: 894 PMAGHCTLLVKVVDINDNTPEISITSLSLPIREDAPVGTVIALVSVSDRDSGANGQVS 951
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PL G C + + D+NDN P ++ L I ED PVGTV+ +++ SD D G N ++S
Sbjct: 329 PLSGHCKVIVKLLDENDNTPQLDITSRFLPIKEDAPVGTVIALITVSDRDSGANGQVS 386
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 61 LKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L T+EH L + G P L GT I V D NDN P F S Y++ +
Sbjct: 196 LKKPLDREETQEHRLVL--IAIDGGRP-ELTGTVQLLINVLDANDNAPEFDKSIYNVRLL 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
E+ P GT+V ++ASDAD G+N ++ + + L D++ +++IN
Sbjct: 253 ENAPNGTLVIQLNASDADEGINKEIMYFF---SNLVLDDVKSKFIIN 296
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+++L E EH L + T G P L GT I V D NDN P F S+Y + I
Sbjct: 761 LRKSLDREDVREHNLLLVATD--GGKP-ELTGTVQLRITVLDVNDNAPSFQHSEYKVRIF 817
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ GT+V ++ASD D G N +S+
Sbjct: 818 ENSENGTIVIRLNASDPDEGTNGAISY 844
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P+FPV + L I E ++ + A+DAD+G NS L++ +L + F+ D
Sbjct: 688 VRDVNDNPPVFPVQEQWLQIYESRLPDSLFPLEGAADADVGSNSILTY-KLSSSEFFALD 746
Query: 157 LR 158
++
Sbjct: 747 VK 748
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P F ++Y++ + E+ G + VSA DAD N+++S++ +E
Sbjct: 1010 VADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSARDADARENARVSYSLVE 1061
>gi|47221177|emb|CAG05498.1| unnamed protein product [Tetraodon nigroviridis]
Length = 771
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 26 LHLRPKSGMYAPAFTFS----------IAKFIANPTTRLYKN-VGTLKRALRTEEHWLKV 74
L R G P FT + + A PT R+ + + + R T + ++ V
Sbjct: 113 LRSRHGDGQITPCFTRTSSDSPRHVGPMVGVTARPTARVIRTALPNMDR--ETRDQYVLV 170
Query: 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDA 134
K G L GT + T+ + D NDN P F Y ++ E +PV +VV + A+DA
Sbjct: 171 IQAKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFSHKNYQYTVLESLPVRSVVAKIKAADA 230
Query: 135 DLGVNSKLSWNELEPNGL 152
D+G N+++ + ++ +GL
Sbjct: 231 DIGSNAEMDYRIMDSDGL 248
>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 197 LDKALDREAEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P+G +V VSA+D D GVN ++S++ + + S +V+
Sbjct: 256 SPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVD 296
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 304 LKKQLDFEK--LQSYEVNIEARDAGGFSGKCTILIQVMDVNDHAPEVTMSAFTSPIPENA 361
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P TVV + S SD D G N K++
Sbjct: 362 P-ETVVALFSVSDLDSGENGKINC 384
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F Y+L + E+ + VSA+D D N++++++ L P
Sbjct: 437 NMTVLVSDVNDNVPAFTQISYTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSLLPPQ 495
>gi|348543507|ref|XP_003459225.1| PREDICTED: cadherin-6-like [Oreochromis niloticus]
Length = 787
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRAL-------RTEEHWLKVENTKHKGSNPGPLVGTC 91
+SI++ +P + N G ++ AL EH+ V K G G L G+
Sbjct: 195 LVYSISQ--GHPYFSVEPNTGVIRTALGPGDMDREQREHYQVVIEAKDMGGQRGGLTGST 252
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
I + D NDN P F S Y +PE G++V + A+D D+G NS++ + + +G
Sbjct: 253 VVKITLTDVNDNPPRFTQSIYQFRVPESSKSGSIVGRIQATDKDIGKNSEMDFTIISGDG 312
Query: 152 LFSSDLRVE 160
+ D+ +
Sbjct: 313 MEMFDISTD 321
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P F Y+ S+PE +GT V V+A+DAD G ++KL ++ + +
Sbjct: 145 IKLHDINDNEPKFSKEVYTASVPERSDIGTSVTQVTATDADDRMYGNSAKLVYSISQGHP 204
Query: 152 LFS 154
FS
Sbjct: 205 YFS 207
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 30/106 (28%)
Query: 72 LKVENTKH----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
L+V+NT+ S P + T + D D P+F + Y + EDV VGTVV
Sbjct: 347 LQVQNTQEYVRFMSSGPKDMA----TVRLAVDDVDEPPVFEKASYLYEVKEDVAVGTVVG 402
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
VSA D D R ++N S+D+ T++
Sbjct: 403 SVSAMDPD----------------------RARSIVNYSIDRRTDR 426
>gi|6483296|dbj|BAA87416.1| cadherin-9 [Homo sapiens]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|47220924|emb|CAG03457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 51 TTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
++R K+ G +K AL +E++ V K G L GT +I + D NDN P
Sbjct: 144 SSRRRKSGGLVKTALPGMDREVKENYQVVIQAKDMAGQMGGLSGTTTVSITLSDVNDNPP 203
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
F + Y +PE + G+VV VV A DAD+G N+++ + + +G
Sbjct: 204 RFTKTLYEFRVPESLEPGSVVGVVRALDADIGENAQMDYRIIGSDG 249
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLS 143
L G I + D NDN P F Y+ +PE +GT V V+A+DAD G ++++
Sbjct: 66 LEGQSEFIIKIHDINDNEPKFTRDPYTAQVPEMSDIGTSVIQVTATDADDATYGNSARVV 125
Query: 144 WNELEPNGLFSSD 156
++ LE FS D
Sbjct: 126 YSILEGQPYFSVD 138
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP + I VED D P+F Y + + ED P TV+ VSASD D
Sbjct: 299 GPFRDEASVKITVEDV-DELPVFERPSYIMEVKEDAPKNTVLGSVSASDPD 348
>gi|355693141|gb|EHH27744.1| hypothetical protein EGK_18015, partial [Macaca mulatta]
Length = 726
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|301764244|ref|XP_002917554.1| PREDICTED: cadherin-20-like [Ailuropoda melanoleuca]
gi|281348956|gb|EFB24540.1| hypothetical protein PANDA_005867 [Ailuropoda melanoleuca]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTII 96
F N V T+K+ L E K K +G+NP GP T I
Sbjct: 322 FDINTDPNFQVGVITVKKPLSFESK--KSYTLKVEGANPHLEMRFLSLGPFQDTTTVHIT 379
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
VED D PIF Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 380 VEDV-DEPPIFEPGFYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVSITIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDAD 135
+Q VSA D D
Sbjct: 512 IQTVSAVDPD 521
>gi|262263271|tpg|DAA06574.1| TPA_inf: protocadherin alpha 15 unspliced isoform [Anolis
carolinensis]
Length = 822
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
G ++ + + +KV + + ++ G P+ G C I V D NDN P +S S+ +
Sbjct: 300 GQIRLSSEIDFESMKVGEIRVEATDKGLPPMRGHCKVLIEVLDVNDNAPEISISSLSVPV 359
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
PED +GTVV +VS SD D G N ++S + L P GL
Sbjct: 360 PEDSSLGTVVALVSISDKDFGANGQVSCS-LWPPGL 394
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+FP S+ L I E + + ASD D+G NS LS+ ++ PN F D
Sbjct: 123 IKDINDNAPVFPASEQILMISESRLPDSSFPLEGASDDDIGSNSHLSY-KISPNDYFILD 181
Query: 157 LR 158
++
Sbjct: 182 VQ 183
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT TI V D NDN P+F S Y + + E+ GT++ ++A+D D G+N ++++
Sbjct: 224 GTAQLTINVLDANDNAPLFNQSVYQVKLFENATKGTLLISLNATDLDEGINKDITYS 280
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPE 118
TL R TE L + + + PL+ T + ++ + D NDN P F + Y++ + E
Sbjct: 413 TLDREQVTEYRLLVMAQDQGE-----PLLSTSTSLVVPISDINDNAPTFTQASYTIFVNE 467
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+ P G + VSA+D D+ N+ +S+
Sbjct: 468 NNPPGAHIFTVSAADPDMAENALISY 493
>gi|426376419|ref|XP_004054998.1| PREDICTED: cadherin-24 [Gorilla gorilla gorilla]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|355778438|gb|EHH63474.1| hypothetical protein EGM_16447 [Macaca fascicularis]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|344298708|ref|XP_003421033.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-24-like [Loxodonta
africana]
Length = 785
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ +++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYTILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP + + VED + P F + Y L++PE+ GT+V VSASD D
Sbjct: 353 GPFKDVASVRVAVEDAPEP-PAFTQAAYHLAVPENKAPGTLVGQVSASDLD 402
>gi|332234778|ref|XP_003266580.1| PREDICTED: protocadherin gamma-A7 [Nomascus leucogenys]
Length = 808
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE + T G +P P T + V D ND+ P+F + QY +++PE+
Sbjct: 196 LERVLDREEERVHHLVLTAFDGGDP-PRSSTARIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V A D D GVN +++++
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYS 280
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRALRT---EEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIF 107
+L K++ R + T + L + N K ++ G PL + + V D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P S YS+ IPE+ P GT + +V+A D D N++++++ E
Sbjct: 453 PHSSYSVYIPENNPRGTSIFLVTAQDHDSEENAQVTYSLAE 493
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L + TL+ E + ++E G PG L I V D NDN P ++ S
Sbjct: 297 LTGELSTLEGLDYEETAFYEMEVQAQDG--PGSLT-KAKVLITVLDVNDNAPEVTMTSLS 353
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
SIPED P+GTV+ + D D G N +++
Sbjct: 354 SSIPEDTPLGTVIALFYLQDRDSGKNGEVTC 384
>gi|296194858|ref|XP_002745139.1| PREDICTED: cadherin-9 [Callithrix jacchus]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGQNAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|126290967|ref|XP_001377705.1| PREDICTED: protocadherin gamma-A2-like [Monodelphis domestica]
Length = 815
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL E+ H L + T G P GT + V D NDN P+F Y++++P
Sbjct: 196 LERALDREDEPIHHLML--TAWDGGEP-VRSGTARIRVTVLDANDNAPVFTQPIYTVNVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+VP GTV+ +V+A+DAD G+NS++ +
Sbjct: 253 ENVPQGTVLLIVNATDADEGINSQVRY 279
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
E H ++VE G L + V D NDN P ++ + SIPE+ P GT++
Sbjct: 312 AEFHEMEVEAQDGLG-----LRSRAKIHVTVVDVNDNAPEVTITSVTSSIPENAPPGTII 366
Query: 127 QVVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 367 TLFHVHDRDSGKNGQV 382
>gi|444708435|gb|ELW49498.1| Cadherin-20 [Tupaia chinensis]
Length = 797
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 193 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 252
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 253 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIIDGDGADAFDINTD 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 319 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 372
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 373 EPGFYFVEVPEDVAIGTTIQIISAKDPDVTNNS 405
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 90 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 146
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 147 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 200
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 437 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 494
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 495 IQTVSAVDQDDPHNGQHFYYSLAPEA 520
>gi|14270493|ref|NP_115267.1| protocadherin gamma-B2 isoform 2 precursor [Homo sapiens]
gi|5457084|gb|AAD43778.1|AF152518_1 protocadherin gamma B2 short form protein [Homo sapiens]
gi|75517925|gb|AAI01806.1| Protocadherin gamma subfamily B, 2 [Homo sapiens]
gi|119582343|gb|EAW61939.1| hCG1982215, isoform CRA_r [Homo sapiens]
Length = 811
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWL-KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH L ++ T G +P P GT I V D NDN P+F
Sbjct: 186 PDGRKYPEL-ILKHSLDREEHSLHQLVLTAVDGGDP-PQSGTTQIRIKVTDANDNPPVFS 243
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 244 QDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYS 280
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 448
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P+F + Y + + E+ P G + +SASD DLG + ++S++ + +SDL+ ++
Sbjct: 449 APVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYS------IVASDLKPREIL 502
Query: 164 N 164
+
Sbjct: 503 S 503
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D ND P V+ S +PED P GTV+ ++ D D G N
Sbjct: 320 EAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGEN 379
Query: 140 SKL 142
++
Sbjct: 380 GEV 382
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F ++ +L I E GT + A D+D+G NS
Sbjct: 120 AVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNS 166
>gi|332223041|ref|XP_003260679.1| PREDICTED: cadherin-24 isoform 3 [Nomascus leucogenys]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|194390076|dbj|BAG60554.1| unnamed protein product [Homo sapiens]
Length = 645
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 43 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 101
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 102 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 142
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+++ D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 283 NITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPP 340
>gi|410977786|ref|XP_003995281.1| PREDICTED: cadherin-20 [Felis catus]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D PIF
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPIFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVSVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDAD 135
+Q VSA D D
Sbjct: 512 IQTVSAVDLD 521
>gi|444713179|gb|ELW54087.1| Protocadherin beta-17 [Tupaia chinensis]
Length = 718
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R ++ L++ T G +P P GT I+V D NDN P F Y + +PED
Sbjct: 196 LDKALDREKQPELRLTLTAQDGGSP-PRTGTSQVLIVVLDINDNVPEFAQLLYKVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+G+ V VSA D+D G N ++++ +P+
Sbjct: 255 SLIGSFVITVSARDSDAGTNGEIAYTFFQPS 285
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T++V D NDN P F + Y+L + E+ + +SA+DAD G N++++++ L P+
Sbjct: 438 TLLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPH 494
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L EE ++ + + S+ G L G C I V D NDN P +S IPE+
Sbjct: 303 LKKLLDFEE--IQSYRMEIEASDGGGLSGKCTVAIEVIDVNDNAPELTMSLLISDIPENS 360
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
P TVV + SD D G N K+
Sbjct: 361 P-ETVVAIFGISDPDSGDNGKM 381
>gi|350594185|ref|XP_003359781.2| PREDICTED: cadherin-9 [Sus scrofa]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSMYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
PE VP+GT + + A+D DLG N+++ ++ E G
Sbjct: 275 FHSPESVPLGTHLGRIKANDPDLGENAEMEYSIAEGEG 312
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L V K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYVLRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|126290880|ref|XP_001377291.1| PREDICTED: protocadherin alpha-7-like [Monodelphis domestica]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
++KF +P + +G + ++ + ++VE T +VG C + V D ND
Sbjct: 287 LSKFAIDPMDGDVRVIGHIDFE-ESKSYQIQVEATDQGIPK---MVGHCTILVEVMDTND 342
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS--SDLR-- 158
N P V SL +PED P GTV+ +VS SD D G N ++ + L P+G F+ S R
Sbjct: 343 NAPEVTVKSLSLPVPEDSPSGTVIALVSVSDRDSGANGLVTCS-LSPSGPFTLVSTFRNY 401
Query: 159 VEWVINRSVDQHT 171
V+ SVD+ +
Sbjct: 402 YSLVLEGSVDRES 414
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+F V+Q +L I E P+ + + A+DAD+GVN+ LS+ +L PN F+ D
Sbjct: 120 IKDINDNPPVFSVTQKNLFISESSPLDSRFPLEGAADADIGVNAVLSY-KLSPNDFFTLD 178
Query: 157 LR 158
L+
Sbjct: 179 LQ 180
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ + D NDN P F Y++ + E+ P G + VSASD D+
Sbjct: 423 TARDGGSPA-LWATASVSVAIADVNDNAPAFEKPVYTVFVKENNPPGCHIFTVSASDPDV 481
Query: 137 GVNSKLSWNELE 148
NS +S++ +E
Sbjct: 482 QENSLVSYSLVE 493
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 60 TLKRALRTEE----HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
LK+ L EE H L K L GT IIV D NDN P F Y +
Sbjct: 192 VLKQLLDREEIPELHLLLTATDGGKAE----LTGTVQLQIIVLDVNDNAPKFDKKLYKVR 247
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ E+ GT+V V+ASD D N ++ ++
Sbjct: 248 LAENSLNGTMVLKVTASDMDEETNGQIIYS 277
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNS 140
PL + + V D+NDN P+ S +S + + V VG VV + A DAD G N+
Sbjct: 541 PLGSNVSLQVFVLDENDNAPVVLPSHAGVSPMTELVSQSVAVGHVVAKIRAVDADSGYNA 600
Query: 141 KLSWNELEP 149
LS+ EL P
Sbjct: 601 WLSY-ELLP 608
>gi|149721140|ref|XP_001489828.1| PREDICTED: cadherin-20 [Equus caballus]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDITTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFAWHNITVLAMEMNNPSQ-VGSVSVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDAD 135
+Q VSA D D
Sbjct: 512 IQTVSAVDQD 521
>gi|149037229|gb|EDL91729.1| cadherin 20 [Rattus norvegicus]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +GSNP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGSNPHVEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVTIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y I E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVAVTIKVLDVNDNAPEFP-RFYEAFICENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|90193626|ref|NP_057363.3| cadherin-9 preproprotein [Homo sapiens]
gi|119370307|sp|Q9ULB4.2|CADH9_HUMAN RecName: Full=Cadherin-9; Flags: Precursor
gi|119631152|gb|EAX10747.1| cadherin 9, type 2 (T1-cadherin), isoform CRA_b [Homo sapiens]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|402872877|ref|XP_003900321.1| PREDICTED: protocadherin beta-13, partial [Papio anubis]
Length = 603
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E L++ T G +P P GT I V D NDN P F Y + I ED
Sbjct: 2 LDKALDREAEAELRLTLTALDGGSP-PRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 60
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
P+G +V VSA+D D GVN ++S++ + + S +V+
Sbjct: 61 SPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVD 101
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+ L E+ L+ + + G G C I V D ND+ P +S ++ IPE+
Sbjct: 109 LKKQLDFEK--LQSYEVNIEARDAGTFSGKCTILIQVMDVNDHAPEVTMSAFTSPIPENA 166
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
P TVV + S SD D G N K+S +
Sbjct: 167 P-ETVVALFSVSDLDSGENGKISCS 190
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T++V D NDN P F + Y+L + E+ + VSA+D D G N+++++
Sbjct: 234 PMLKTQLNITVLVADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 293
Query: 145 NELEPN 150
+ L P
Sbjct: 294 SLLPPQ 299
>gi|348576800|ref|XP_003474174.1| PREDICTED: cadherin-20-like [Cavia porcellus]
Length = 801
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADTFDINTD 327
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KTYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPD 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q+VSA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIVSAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP + G+ + TI V D NDN P FP Y S+ E+ G +
Sbjct: 454 REEFSWHNITILAMEMNNPSQM-GSVSVTIEVLDVNDNAPEFP-RFYEASVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|326673389|ref|XP_003199870.1| PREDICTED: protocadherin gamma-A8-like [Danio rerio]
Length = 810
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ + + T G P P GT + V D NDN P+F + Y +S+PE+ PV TV
Sbjct: 197 REQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPENSPVDTV 255
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSA+DAD G N K+++
Sbjct: 256 VVTVSATDADEGQNGKVTY 274
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N + V D NDN P+F Y + E+ G+ + VSA+D D N + ++
Sbjct: 426 PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQENNKAGSSICSVSATDPDWRQNGTVVYS 485
Query: 146 ELEPNGLFSSDL 157
L SSD+
Sbjct: 486 ------LLSSDV 491
>gi|148664774|gb|EDK97190.1| mCG140841 [Mus musculus]
Length = 794
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E +++ T G P L GT I V D NDN P+F S Y++ +PE+VP GT+
Sbjct: 211 REEAAEIRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPVFDRSLYTVKLPENVPNGTL 269
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
V V+ASD D GVN + ++ FSSD+
Sbjct: 270 VIKVNASDLDEGVNGDVMYS-------FSSDV 294
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 435 TARDGGSPS-LWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAMDADA 493
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 494 QENALVSYSLVE 505
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G C + V D NDN P VS SL + ED G VV ++S D D G N +++ +
Sbjct: 339 LPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCS 397
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q +L I E + + + ASDAD+G N+ L++ L N FS D
Sbjct: 132 VKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFSLD 190
Query: 157 L 157
+
Sbjct: 191 V 191
>gi|426385057|ref|XP_004059053.1| PREDICTED: cadherin-9 [Gorilla gorilla gorilla]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|11128035|ref|NP_061746.1| protocadherin gamma-B2 isoform 1 precursor [Homo sapiens]
gi|37999832|sp|Q9Y5G2.1|PCDGE_HUMAN RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
gi|5456959|gb|AAD43725.1| protocadherin gamma B2 [Homo sapiens]
gi|119582354|gb|EAW61950.1| hCG1982215, isoform CRA_ac [Homo sapiens]
Length = 931
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWL-KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH L ++ T G +P P GT I V D NDN P+F
Sbjct: 186 PDGRKYPEL-ILKHSLDREEHSLHQLVLTAVDGGDP-PQSGTTQIRIKVTDANDNPPVFS 243
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 244 QDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYS 280
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 448
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P+F + Y + + E+ P G + +SASD DLG + ++S++ + +SDL+ ++
Sbjct: 449 APVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYS------IVASDLKPREIL 502
Query: 164 N 164
+
Sbjct: 503 S 503
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D ND P V+ S +PED P GTV+ ++ D D G N
Sbjct: 320 EAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGEN 379
Query: 140 SKL 142
++
Sbjct: 380 GEV 382
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F ++ +L I E GT + A D+D+G NS
Sbjct: 120 AVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNS 166
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+
Sbjct: 876 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINA 935
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 936 QITYSLNEESINGLGSPD 953
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G +P L T + I V D NDN P
Sbjct: 955 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGSPS-LSDTTDVEISVTDVNDNAP 1010
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 1011 VFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 1049
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS P L + I +ED ND+
Sbjct: 1059 GSFVIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGSPP--LSSSVEVQIRLEDVNDS 1114
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1115 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1156
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K+ R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 751 VQTIKQLDREEQSRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPTFNPKYYEANVG 809
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 810 EDQPQGTPVTTVTATDPD 827
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 684 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGPNAEITYSISERDDNFPLA 743
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 744 VDPRTGWV 751
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 412 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 467
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 468 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 506
>gi|432933151|ref|XP_004081830.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 1021
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y + +K R + + VE G NP G+ T+ V D NDN+P+F + +S+
Sbjct: 239 YAELVLMKELDRETQSFYNVELVATDGGNPY-RSGSSKITVKVTDFNDNSPVFDQNSFSV 297
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
S+PED P GTV+ ++A DAD G+N ++ +
Sbjct: 298 SLPEDAPPGTVILDLNAVDADEGLNGEVVY 327
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TI + D+NDN P F + Y + + E+ G + V ASDADLG N K+++
Sbjct: 488 PLRKITQFTIRLNDENDNAPHFAKAVYEVPVVENNAPGAYITTVEASDADLGNNGKITYR 547
Query: 146 ELE 148
+E
Sbjct: 548 LVE 550
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 99 DQNDNNPIF---PVSQYSLSI--PEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
DQNDN P P+ + S + P+D P G VV + A+DAD G N++LS+ E
Sbjct: 611 DQNDNQPAIIEPPLFKGSAEVFLPKDAPAGYVVTQIKATDADEGTNAQLSYKIAE 665
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN+P FP +Y + I E+ +G+ + + A DAD+G N S+ ++ N F+ D
Sbjct: 171 IKDINDNSPEFPSKEYMVEISENAALGSRIPLDPAVDADVGSNYIQSY-QISVNSHFTID 229
Query: 157 --LR------VEWVINRSVDQHTN 172
LR E V+ + +D+ T
Sbjct: 230 VLLRADGVKYAELVLMKELDRETQ 253
>gi|338717689|ref|XP_001918358.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-24 [Equus caballus]
Length = 716
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|327270459|ref|XP_003220007.1| PREDICTED: protocadherin alpha-2-like [Anolis carolinensis]
Length = 874
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
G ++ + + +KV + + ++ G P+ G C I V D NDN P +S S+ +
Sbjct: 287 GQIRLSSEIDFESMKVGEIRVEATDKGLPPMRGHCKVLIEVLDVNDNAPEISISSLSVPV 346
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
PED +GTVV +VS SD D G N ++S + L P GL
Sbjct: 347 PEDSSLGTVVALVSISDKDFGANGQVSCS-LWPPGL 381
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT TI V D NDN P+F S Y + + E+ GT++ ++A+D D G+N ++++
Sbjct: 211 GTAQLTINVLDANDNAPLFNQSVYQVKLFENATKGTLLISLNATDLDEGINKDITYS 267
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+FP S+ L I E + + ASD D+G NS LS+ ++ PN F D
Sbjct: 110 IKDINDNAPVFPASEQILMISESRLPDSSFPLEGASDDDIGSNSHLSY-KISPNDYFILD 168
Query: 157 LR 158
++
Sbjct: 169 VQ 170
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPE 118
TL R TE L + + + PL+ T + ++ + D NDN P F + Y++ + E
Sbjct: 400 TLDREQVTEYRLLVMAQDQGE-----PLLSTSTSLVVPISDINDNAPTFTQASYTIFVNE 454
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
+ P G + VSA+D D+ N+ +S+
Sbjct: 455 NNPPGAHIFTVSAADPDMAENALISY 480
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+
Sbjct: 876 ATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINA 935
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 936 QITYSLNEESINGLGSPD 953
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G +P L T + I V D NDN P
Sbjct: 955 FSINPQTGAIVTNAPLDRET-TSGYLLTV--TAKDGGSPS-LSDTTDVEISVTDVNDNAP 1010
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 1011 VFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 1049
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 1059 GSFVIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 1114
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1115 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1156
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K+ R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 751 VQTIKQLDREEQSRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPTFNPKYYEANVG 809
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 810 EDQPQGTPVTTVTATDPD 827
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 412 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 467
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 468 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 506
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++++ +E + N +
Sbjct: 684 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGPNAEITYSISERDDNFPLA 743
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 744 VDPRTGWV 751
>gi|22164150|gb|AAM93580.1|AF464181_1 protocadherin gamma B2-alpha C [Mus musculus]
Length = 956
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LKR L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 185 PDGRKYPEL-ILKRFLDREEHNFHQLVLTAVDGGDP-PRSGTTQIRIQVTDINDNPPMFS 242
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVD 168
+S+++ EDVP G V V+A+D D GVN+++++ + D +VE + N +D
Sbjct: 243 QDVFSVTLREDVPPGFSVLQVTATDQDEGVNAEITY------AFHNVDEQVERIFN--LD 294
Query: 169 QHTNK 173
+ T +
Sbjct: 295 KRTGE 299
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL T+ + D NDN P+F + Y + + E+ P GT + VSASD DLG N +S+
Sbjct: 430 PLSSNVIITLHISDVNDNAPVFHQASYLVHVAENNPPGTSIAQVSASDPDLGSNGLISYS 489
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 490 IIASDLEPRALSS 502
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P+GTV+ ++ D D G N
Sbjct: 319 EAKDPGDLASHCSIQVKILDENDCVPEVIVTSVFTPLPEDSPLGTVIALIKTRDRDSGEN 378
Query: 140 SKLSWNELEPNGLF---SSDLRVEWVINRSVDQHT 171
+ + L G SS + V +R++D+
Sbjct: 379 GDVYCHVLGNEGFVLKSSSKNYYKLVTDRTLDREA 413
>gi|410925612|ref|XP_003976274.1| PREDICTED: cadherin-24-like, partial [Takifugu rubripes]
Length = 1101
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T++ +L + K G + G L GT T+ + D NDN P F S +S S+ E G +
Sbjct: 152 TQDQYLVLLQAKDMGGHLGGLSGTTTVTVKLTDVNDNPPRFTQSMWSFSVSELAIPGAEI 211
Query: 127 QVVSASDADLGVNSKLSWN--ELEPNGLFS-SDLRVEWVI--NRSVD 168
+SA+DADLG N+KL + E E F+ S + E +I NR+VD
Sbjct: 212 GRISATDADLGENAKLEYTILEGESGDTFNISGMNQEAIITLNRAVD 258
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P+F YS S+PE +GT + V+A+DAD G ++KL + ++
Sbjct: 71 IRVQDINDNPPVFDEGPYSASVPEMANIGTSIIQVTATDADDPTYGNSAKLVYTLVQGQQ 130
Query: 152 LFSSD 156
FS D
Sbjct: 131 YFSVD 135
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 53 RLYKNVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPV 109
R+ + G + A+ R EHW + + NP V I D NDN P
Sbjct: 355 RIAPDAGLITTAMELDREREHWHNITVIATQRDNPSQ-VSRVVVAIETLDLNDNAPELD- 412
Query: 110 SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
QY+ ++ + VG VVQV+ A D D G N + + P+
Sbjct: 413 RQYTTAMCDSSSVGQVVQVLRAIDRDEGGNDSTVYFSIPPD 453
>gi|380802817|gb|AFE73284.1| protocadherin beta-14 precursor, partial [Macaca mulatta]
Length = 741
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 190 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 248
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 249 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 289
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 430 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 485
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 117 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 175
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 176 IPDSSDRKIYPELVLDRALD 195
>gi|397475345|ref|XP_003809103.1| PREDICTED: cadherin-9 [Pan paniscus]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|380803105|gb|AFE73428.1| protocadherin beta-14 precursor, partial [Macaca mulatta]
Length = 749
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 190 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 248
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 249 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 289
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 430 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 485
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 117 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 175
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 176 IPDSSDRKIYPELVLDRALD 195
>gi|351715648|gb|EHB18567.1| Cadherin-9 [Heterocephalus glaber]
Length = 789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP + Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQNTYH 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FTSPESVPLGTHLGRIKANDPDMGTNAEMEYSIAEGDG 312
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVP 121
+ L EE L + K G V + II + D NDN P F Y+ S+PE
Sbjct: 114 KKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASVPEMSG 173
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 174 VGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|194580186|gb|ACF75934.1| protocadherin alpha 7 [Mus musculus]
Length = 475
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 50 PTTRLYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
P + K +G L++ L R E +++ T G P L GT I V D NDN P+F
Sbjct: 142 PNHKQVKPLGLVLRKPLDREEAAEIRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPVF 200
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
S Y++ +PE+VP GT+V V+ASD D GVN + ++ FSSD+
Sbjct: 201 DRSLYNVKLPENVPNGTLVIKVNASDLDEGVNGDVMYS-------FSSDV 243
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 384 TARDGGSPS-LWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAMDADA 442
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 443 QENALVSYSLVE 454
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G C + V D NDN P VS SL + ED G VV ++S D D G N +++ +
Sbjct: 288 LPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCS 346
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q +L I E + + + ASDAD+G N+ L++ L N FS D
Sbjct: 81 VKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFSLD 139
Query: 157 L 157
+
Sbjct: 140 V 140
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++ + T G G + + TI+V D NDN P+F Y+++IPEDV VGT V
Sbjct: 3199 ESYRIRAQATDRVGQQ-GAMSSQVDLTILVLDVNDNAPVFQKRDYAVTIPEDVAVGTEVL 3257
Query: 128 VVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSV 167
V A+ AD+G N+++++ N L +++INR +
Sbjct: 3258 RVLATSADIGPNAEITYTIRSGNELG------KFIINRKL 3291
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
++V++ KG+ + +IIVED ND +P F S YS +PED+P GTV+ V A
Sbjct: 887 IEVKDKAEKGTRRSSVT---TLSIIVEDVNDCSPAFIPSSYSARVPEDLPSGTVITWVQA 943
Query: 132 SDADLGVNSKLSWNEL-EPNGLF 153
D D+G ++ ++ + + NG F
Sbjct: 944 QDPDIGPGGQVQYSLINDFNGTF 966
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 91 CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
C +++ D+NDN P F +Y +SI +V G++V + A+D D G N +++++
Sbjct: 2570 CTVRVVLADENDNAPKFRAVEYRMSIKANVAKGSLVTQIQATDPDAGSNGRITYSLYSEA 2629
Query: 151 GLFSSD-LRVE----WVINRSVDQH 170
L D L VE W++ +S H
Sbjct: 2630 RLSLVDVLEVESDSGWMMTKSTVDH 2654
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T+I+ED NDN+P F YS + E+ +G+ V ++A D D+G N +LS+
Sbjct: 801 TVIIEDANDNDPRFYQDNYSAVVAENSAIGSEVITITAFDKDMGQNGQLSF 851
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I +ED N+N+P+F +++I E +PVGTVV VVSA D D G N +++
Sbjct: 444 ITIEDANNNSPVFIRPPSTIAINESLPVGTVVLVVSAVDDDKGENGYITY 493
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K S G L I V D ND P+F + YS + E P+GT + V+A+DAD+G N
Sbjct: 116 KASAQGGLEALVTVFIKVLDTNDLRPLFSPTFYSFVVSESAPLGTTIGRVTATDADVGSN 175
Query: 140 SKLSW 144
+ +
Sbjct: 176 GEFYY 180
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
N G L+ A + + N + ++ G L + ++ V D NDN P+F + Y S+
Sbjct: 3081 NTGELRTATVMDRELVPTYNLIAQATDGGGLFCRSDISLKVLDVNDNAPLFSSTHYLASV 3140
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEP-NGLFSSD-LRVEWVINRSVDQHTNK 173
E+ ++ + A+D D G+N + ++ ++ NG FS D L ++ +S+D+ + +
Sbjct: 3141 YENAAPKALLTRLQATDPDEGLNRTVVYSLVDSFNGFFSIDSLSGVVILEKSLDRESQE 3199
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ V D NDN+PI + YS S PED+ + VSA+DAD G ++++ ++
Sbjct: 3017 VTVMDANDNSPICKQAVYSASFPEDILTNKGILTVSATDADSGSSAEIQYS 3067
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
+++++ VE NP PL I + D NDN P F Y++ I ED VG V
Sbjct: 3306 KDYYITVE--AWDSGNP-PLSTATMVVIELMDVNDNAPTFDQDVYNVLISEDASVGQTVT 3362
Query: 128 VVSASDADLGVNSKLSWNELE 148
VSA D D VN +++++ L+
Sbjct: 3363 RVSAEDLDSQVNGRITYSILK 3383
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V T + + + D NDN P+F + Y ++ E +P GT V V A D D G N +++++
Sbjct: 2781 VTTVDVEVKILDVNDNQPVFETNAYVATVMEGMPAGTRVIQVRALDPDWGSNGQVTYS 2838
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 34 MYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNT 93
MYA S+ F +P T + L RT+ H L V + L
Sbjct: 1479 MYASVDPGSMRLFRVSPGTGVIYTADRLDYEARTQ-HILTVMVKDQEFPFNRDL---ARI 1534
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ VED NDN P F + Y + E P G V V+A D D G+N +L+++
Sbjct: 1535 VVAVEDINDNVPFFTRTTYDAVVYETSPAGYSVLQVTALDKDSGINGQLTYS 1586
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 54 LYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L VGTL A + V N + ++ G T I V+D NDN P+F Y
Sbjct: 1390 LQVGVGTLVVAKPLDAEVQSVYNMTVQVTD-GTSFATAQVFIRVQDSNDNPPVFSQPTYD 1448
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+++ ED P + V A+D D
Sbjct: 1449 VTVSEDAPADMELLRVRATDID 1470
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTT---IIVED 99
F NP T L + T R L E EH+L+V P+ +T + +ED
Sbjct: 1179 FSINPRTGL---ITTTARKLDREQQAEHFLEVTVIDS------PVTTRQSTVWVIVHIED 1229
Query: 100 QNDNNPIFPVSQYSLSIPEDVPVGTV--VQVVSASDADLGVNSKLSWNELEPN 150
+NDN P FP + Y +S+PE V V V A D D G N ++++ + N
Sbjct: 1230 ENDNRPTFPEATYRISLPERDRNRRVEPVYRVFAYDRDSGANGNITYSITDGN 1282
>gi|426350322|ref|XP_004065330.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-14 [Gorilla
gorilla gorilla]
Length = 787
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEQEAELRLTLTAVDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIATISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 295
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN PIF + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPIFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 494
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E VG + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYT-ISPNSHFYIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 182 IPDSSDRKIYPELVLDRALD 201
>gi|395833102|ref|XP_003789584.1| PREDICTED: cadherin-12 [Otolemur garnettii]
Length = 794
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPRFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +P T ++ L+++L E +H+ KGS+P T I VED NDN
Sbjct: 1920 FYLDPATGAFR----LQQSLDYEVKQHYFMTVMATDKGSSPRS--STATVYINVEDVNDN 1973
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
NP++ YS +PEDV +GT V ++A+D D G N +L ++
Sbjct: 1974 NPVYNPVDYSEEVPEDVAIGTSVVTLTATDLDSGSNGELQFS 2015
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L T I + D+NDN+P+F +S YS +PED VG V VV A+D D G+N ++++
Sbjct: 1848 GTLTSTTTIDINLLDENDNDPVFSLSTYSFLVPEDEMVGEDVGVVVATDPDAGLNGEVAY 1907
Query: 145 NELEPNG----LFSSD-----LRVEWVINRSVDQH 170
+ +E +F D R++ ++ V QH
Sbjct: 1908 SVVEEGAPGEDVFYLDPATGAFRLQQSLDYEVKQH 1942
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E+ ++E G +P L T TI V DQNDN P F ++Y S+ E+ P G
Sbjct: 671 REEQDSYELEILASDGGSPS-LQATATVTIAVLDQNDNPPQFYPTEYYASVIENGPAGLF 729
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VVSA+D D+GVN + ++
Sbjct: 730 VTVVSATDLDVGVNGAVIFS 749
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 34 MYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNT 93
+ P F++++ N + G L R TE + + KG+ P T N
Sbjct: 2122 LLTPGVPFAVSRVEGN-----MQVTGPLDR--ETESSYALLVQATDKGTPPQS--STMNL 2172
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI + D NDN P F ++ Y ++ ED PVG V+ASD D G+NS + ++ +F
Sbjct: 2173 TIYITDVNDNAPAFSMTPYEATLDEDTPVGLEFLKVTASDPDEGLNSIIRYS------IF 2226
Query: 154 SSDLRVEWVIN 164
S D + I+
Sbjct: 2227 SGDSGRAFAID 2237
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 61 LKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
+KRAL + +++ L +E T G P + T IIV D+NDN P F + Y+ +
Sbjct: 1077 VKRALDREQVDQYDLTIEATD--GGVPS-MTSTLMLEIIVLDENDNRPFFDNATYNFYLS 1133
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
E+ +G V + A D D+G N +L+++ + LF+
Sbjct: 1134 EEDDIGAAVGTIHAVDNDVGGNGELTYSFTANHTLFT 1170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE-DVPVGTVVQVVSASDADLGVNSKLSWN- 145
V + TI V D NDN P+F S Y+ SI E ++P +VQ V A DAD GVN +++
Sbjct: 2272 VSSVTVTITVADVNDNAPVFEDS-YAPSIMENNLPNADIVQ-VRADDADSGVNGMINFRL 2329
Query: 146 ELEPNGLFS 154
E + NGLF+
Sbjct: 2330 ESDYNGLFT 2338
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D+ND+ P+F Y + E + VG+ V+ V+A+DAD G+N+ + ++
Sbjct: 491 IYVVDENDHAPMFLQESYRAGLLESIQVGSFVKSVTATDADEGINADIVYS 541
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T ++ D NDN P+F Y SI ED VG V V A D D G+N +++++
Sbjct: 3107 TFLITDSNDNAPVFDDDTYRSSIAED--VGGYVATVRAEDDDSGINGEITYS 3156
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKV---ENTKHKGSNPGPLVGTCNTTIIVEDQ 100
A F + + + VG+L R ++EH ++V + + S L+ + V D
Sbjct: 3163 ALFSIDAVSGIVSLVGSLDRE-TSDEHQIQVTAEDRAMYSQSATAILI------VTVTDV 3215
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+DN P+F +Y + E+ P T V V+A+DAD G N+ +
Sbjct: 3216 DDNPPVFLPREYRADVFENSPSATPVVTVTATDADTGTNADFEY 3259
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
P+ T TI ++D ND P+F YS ++ E+ P ++QV+ A+D D GVN +++
Sbjct: 586 PMANTTILTIDIQDVNDEYPVFNQIAYSETVEENSPARDLIQVL-ATDLDNGVNGDVTYT 644
Query: 145 -NELEPNGLFSSD 156
+ + +G+FS D
Sbjct: 645 FSSDQYSGMFSLD 657
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+F N TT + + R L + + L V G+N + I V D NDN
Sbjct: 108 EFHLNSTTGIITTADVIDRELLPNDLFILPVAVVTSSGTN------IVDIKITVNDLNDN 161
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
+P+FP S SLS E+ G+V + SA DAD N +S
Sbjct: 162 SPVFPQSVISLSFSENAHSGSVQILPSAMDADKDSNGYIS 201
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T ++ L + T G +P L + I + D NDN+PIF I E+ P G V
Sbjct: 1406 TSQYSLNI--TARDGGSPS-LQAVVSMVINIRDCNDNSPIFAYVGVP-EIDEEKPEGFEV 1461
Query: 127 QVVSASDADLGVNS--KLSWNELEPNG-LFSSDLRVEWVINRS 166
VSASD+D GVN + S + P+G F+ D W+ S
Sbjct: 1462 VRVSASDSDSGVNGEVRFSISSQRPSGDFFAIDPESGWITTNS 1504
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS-QYSLSIPEDVPVGTVV 126
+E+ L+++ T + P PL + N + V D N+N P+F S +L + E +PV ++V
Sbjct: 983 KEYNLQIQATDY--GTP-PLSSSMNLLVTVRDVNNNAPVFVDSINTTLRLTESIPVNSIV 1039
Query: 127 QVVSASDADLGVNSKLSWNELEPN----GLFSSDL-RVEWVINR-SVDQH 170
A+DAD G N +S+ N G+F + V+ ++R VDQ+
Sbjct: 1040 IHALATDADQGTNGLISYRITSGNTDSFGIFPDGMVYVKRALDREQVDQY 1089
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
L E + N ++ P G + + D NDN+PIF + Y ++ E GT
Sbjct: 239 LDRETEDFYILNISATDNSSTPRTGYLIVNVTITDVNDNSPIFTQTTYFATVNESSAAGT 298
Query: 125 VVQVVSASDADLGVNSKLSW---NELEPNGLFSSDLRVEWV 162
V ++A+D D G N + + NEL N F+ D W+
Sbjct: 299 SVVHLNATDIDQGSNGDIVYRLKNELTDN--FALDPDTGWI 337
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T+ V D+NDN P+F Y+ SI E+V + V+ V A+DADL
Sbjct: 1758 TVNVLDENDNAPVFTNGPYTASIRENVASNSPVKTVMATDADL 1800
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ T++ L V T T + I V D NDN P F SQ + +I T
Sbjct: 1513 MATDQFILTVHGTDLAVPVESRRTATVDVVIFVRDINDNAPRF-TSQQAAAISRSTSANT 1571
Query: 125 VVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
V V A D D GVN ++++ + F DL
Sbjct: 1572 RVTTVHADDPDTGVNGQVTYTLISTGVPFRLDL 1604
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPED-VPVGTVVQVVSASDADLGVNSKLSW 144
VED NDN P+F + + + PE G V+ VSA+DAD G N ++ +
Sbjct: 2890 VEDTNDNAPVFTENSINTTYPEIFFSSGNVIATVSATDADDGDNGQVDY 2938
>gi|348500126|ref|XP_003437624.1| PREDICTED: cadherin-8 [Oreochromis niloticus]
Length = 798
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+ R +R E + V K G + G L GT +I ++D NDN P F S Y IPED+
Sbjct: 233 MDREMR--EDYQVVIQAKDMGGHMGGLSGTTTVSITLQDINDNPPKFSKSLYEFVIPEDL 290
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPN--GLF 153
P+G V A+D D+G N+K +++ +E + G+F
Sbjct: 291 PLGKEGGKVKANDRDIGENAKSTYSIIEGDDQGVF 325
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEE---HWLKVE--NTKHKGSNPGPLVGTCNTTIIV 97
+ + I N TT+ + + L++ L E + LKVE N + + + GP T I+V
Sbjct: 324 VFEIITNATTQ--EGILQLRKPLDYESKRNYTLKVEATNIRSEPRSNGPFKDTATVKIVV 381
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
ED +D P+F Y L + E+ P+ ++ V+A D D
Sbjct: 382 ED-SDEPPVFSKPMYLLEVDENAPINKIIGTVTARDPD 418
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P F Y ++ E VGT V V+A+DAD G ++KL ++ LE
Sbjct: 156 IKVQDINDNAPKFTEGPYHAAVEEMSAVGTSVITVTATDADDPVYGNSAKLVYSILEGQP 215
Query: 152 LFSSD 156
FS D
Sbjct: 216 YFSVD 220
>gi|301753523|ref|XP_002912646.1| PREDICTED: protocadherin beta-15-like [Ailuropoda melanoleuca]
Length = 796
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++ L++ T G +P P GT I+V D NDN P F + Y
Sbjct: 189 RKYPELVLDKELDREKQAELRLTLTALDGGSP-PRSGTAQVRILVLDVNDNAPEFAKTLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+ PVG +V VSA D D G N ++S++
Sbjct: 248 QVQVPENSPVGMLVVKVSARDLDTGTNGEISYS 280
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+G ++V D ND++P FP + +L I E+ P GTV + A D D+G N+ +++ +
Sbjct: 114 LGVFRAELLVRDINDHSPEFPEGEMTLKISENSPPGTVFPLKKAQDLDVGKNNIQNYS-I 172
Query: 148 EPNGLFSSDLRV--------EWVINRSVDQH 170
PN F R E V+++ +D+
Sbjct: 173 SPNSHFHVSTRTRGDGRKYPELVLDKELDRE 203
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 493
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G L G C+ +I V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 321 ASDGGGLSGRCSVSIEVVDVNDNYPEITISSLTSPIPENSP-ETEVALFRIRDRDSGDNG 379
Query: 141 KLSWN 145
+++ +
Sbjct: 380 RMTCS 384
>gi|291395174|ref|XP_002714126.1| PREDICTED: cadherin 12, type 2 [Oryctolagus cuniculus]
Length = 794
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ V + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAVGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPRFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|109082920|ref|XP_001105292.1| PREDICTED: cadherin-24-like [Macaca mulatta]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|114600868|ref|XP_001135234.1| PREDICTED: cadherin-9 isoform 1 [Pan troglodytes]
gi|77748079|gb|AAI07595.1| Cadherin 9, type 2 (T1-cadherin) [Homo sapiens]
gi|88683047|gb|AAI13746.1| Cadherin 9, type 2, preproprotein [Homo sapiens]
Length = 789
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|348582894|ref|XP_003477211.1| PREDICTED: protocadherin alpha-4-like [Cavia porcellus]
Length = 798
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
Query: 56 KNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
K +G L+++L R E + +E T G P L GT I V D NDN P+F + Y+
Sbjct: 190 KGLGLVLRKSLDREETPEIFLELTVTDGGKP-ELTGTVQLLITVLDANDNAPVFDRALYT 248
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ +PE+VP GT++ V+ASD D G+N ++ + LFS+D+
Sbjct: 249 VKLPENVPNGTMIIKVNASDLDEGLNGEMLF-------LFSTDI 285
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D NDN P+FP +Q SL I E PV T + + ASDAD+G N+ L++ L PN F
Sbjct: 123 VKDINDNAPVFPATQKSLFIAESRPVDTRLPLEGASDADVGANALLTYR-LSPNEYFSLE 181
Query: 154 --SSDLRVE---WVINRSVDQH 170
S D R++ V+ +S+D+
Sbjct: 182 KPSEDKRIKGLGLVLRKSLDRE 203
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G C + VED NDN P SL I E+ +GTV+ ++S SD D G N +++ +
Sbjct: 329 PLSGHCRVIVEVEDTNDNAPDLEFKSLSLPIRENAQLGTVIALISVSDLDSGSNGQVTCS 388
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P PL + ++ V D NDN P+F +Y++ + E+ P G + V A DAD
Sbjct: 426 TAKDGGSP-PLWASATVSVEVADVNDNAPLFAQPEYTVFLKENNPPGAHIFTVCARDADT 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
>gi|348540000|ref|XP_003457476.1| PREDICTED: hypothetical protein LOC100693831 [Oreochromis
niloticus]
Length = 1656
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + V + R T++ +L V K G + G L GT T+ + D NDN
Sbjct: 635 FSVDPQTGILRTAVPDMDR--ETQDQYLVVLQAKDMGGHLGGLSGTTTVTVRLTDVNDNP 692
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P F S +S S+ E G + +SA+DADLG N+KL + LE
Sbjct: 693 PRFTQSMWSFSVSELAIPGAEIGRISATDADLGENAKLEYTILE 736
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P+F YS ++PE +GT + V+A+DAD G ++KL + ++
Sbjct: 574 IRVQDINDNPPVFDEGPYSATVPEMANIGTSIIQVTATDADDPTYGNSAKLVYTLVQGQQ 633
Query: 152 LFSSD 156
FS D
Sbjct: 634 YFSVD 638
>gi|332228107|ref|XP_003263232.1| PREDICTED: cadherin-9 [Nomascus leucogenys]
Length = 789
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|281345414|gb|EFB20998.1| hypothetical protein PANDA_000355 [Ailuropoda melanoleuca]
Length = 2559
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++ L++ T G +P P GT I+V D NDN P F + Y
Sbjct: 1961 RKYPELVLDKELDREKQAELRLTLTALDGGSP-PRSGTAQVRILVLDVNDNAPEFAKTLY 2019
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+ PVG +V VSA D D G N ++S++
Sbjct: 2020 QVQVPENSPVGMLVVKVSARDLDTGTNGEISYS 2052
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E ++ T G +P P GT I+V D NDN P F Y + +PE+ PV ++
Sbjct: 497 REKEPEFRLTLTALDGGSP-PRSGTTLVHILVLDINDNAPEFERPVYEVQVPENSPVDSL 555
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D G+ +LS++
Sbjct: 556 VVRVSATDLDAGIYGELSYS 575
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 53 RLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
+LY + L RAL EE L + T G +P P GT I V D NDN P F
Sbjct: 189 KLYPEL-VLDRALDHEEEPELTLTLTALDGGSP-PRSGTTLVLIKVLDINDNAPQFAQKL 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
Y + + ED P+G+ + + A+D D G K+S+ L S D+R + IN
Sbjct: 247 YEVHVLEDTPIGSWIITIFANDLDAGNYGKISYTFLHA----SEDIRKTFEIN 295
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ G P P GT I + D NDN P F Y + I E+
Sbjct: 1137 LDKALDREEQPELRLTLLAVDGGVP-PKTGTALVLIDILDINDNAPEFVQPLYCVQILEN 1195
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P+G+++ VSA D D G N ++ ++
Sbjct: 1196 SPLGSLIVTVSAGDLDTGTNGEVFYS 1221
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+G ++V D ND++P FP + +L I E+ P GTV + A D D+G N+ +++ +
Sbjct: 1886 LGVFRAELLVRDINDHSPEFPEGEMTLKISENSPPGTVFPLKKAQDLDVGKNNIQNYS-I 1944
Query: 148 EPNGLFSSDLRV--------EWVINRSVDQH 170
PN F R E V+++ +D+
Sbjct: 1945 SPNSHFHVSTRTRGDGRKYPELVLDKELDRE 1975
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P+F Q + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPMFLDKQILIKISESTSIGTTFLLESAQDLDVGTNSLQNYT-ISPNSHFYIK 181
Query: 154 ---SSDLRV--EWVINRSVDQH 170
SSD ++ E V++R++D
Sbjct: 182 IRDSSDGKLYPELVLDRALDHE 203
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 732 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 789
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 1430 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 1487
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N ++ V D NDN P F S Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 2208 NLSVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGANAQVTYSLLLP 2265
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
S+ G L G C+ +I V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 2093 ASDGGGLSGRCSVSIEVVDVNDNYPEITISSLTSPIPENSP-ETEVALFRIRDRDSGDNG 2151
Query: 141 KLSWN 145
+++ +
Sbjct: 2152 RMTCS 2156
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 54 LYKNVGTLKRALRTE-EHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDNNPIFPVSQ 111
L K+ G LK A + + E K + T H P + I+V D NDN P F ++
Sbjct: 1816 LDKDSGQLKTARQLDRETQSKYQLTAHVQDRDHPGWECSSQIVIVVTDLNDNPPEFSLNP 1875
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
YS+++PED VGT+V + A+DAD+GVN K+ ++ ++
Sbjct: 1876 YSVTLPEDAEVGTLVTKIHATDADIGVNRKIKYSFID 1912
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + V+D+NDN PIF + YS + E++ G+ + ++A D+D G N + ++
Sbjct: 1538 PLTAVTEVILHVQDENDNTPIFESNPYSFVLAENIEKGSSIMKLTARDSDSGSNGDIRYS 1597
Query: 146 ELEPNG----LFSSDLRVEWV 162
G +F D W+
Sbjct: 1598 LSADVGDIVNIFDVDAYTGWI 1618
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF N T + TL R ++++L ++ G P PL I V D NDN
Sbjct: 2022 KFAMNNRTGILSLADTLDYE-RAKDYFLTIQAVD--GGTP-PLSNLATVNISVTDSNDNP 2077
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F + Y+ I ED G + V A+D D N ++S+
Sbjct: 2078 PQFTQNSYTARIREDAQKGDKILQVRANDMDAEENGRVSY 2117
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T V T K L E + K N +N TC I V D+NDN P
Sbjct: 449 FFINPST----GVITTKDILDYETN--KFYNLTVLATNMASANATCAVIINVLDRNDNVP 502
Query: 106 IFPVSQYSLSIPEDVPVGTVV--------------------QVVSASDADLGVNSKLSWN 145
F Y + E P+G++V V+ A DAD G+N+ L ++
Sbjct: 503 YFEQQVYKGEVSEATPIGSLVLTLNELPPNVSQLLVNVSLPLVIKAKDADSGLNALLHYD 562
Query: 146 ELE 148
LE
Sbjct: 563 ILE 565
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 93 TTIIV--EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
TT+I+ +D ND P F S+Y+ S+ ED GTVV +S +D D+ + + + +
Sbjct: 1650 TTVIIRLKDYNDCPPTFKESRYNSSVSEDALPGTVVLQISTTDKDVDLKTPIEY 1703
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T + + V D NDN P F Y+ + E G V VVSASD D + +L++
Sbjct: 1126 LSSTAHVWVSVLDMNDNPPKFEQPSYTCVLSEHAARGQFVTVVSASDPDYIDHDRLTYTI 1185
Query: 147 LEPNGLFSSDL 157
+ N L + D+
Sbjct: 1186 AQGNELQTYDI 1196
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P F Y S+PE VG+ + V A+ D G+N++++++
Sbjct: 1965 VQDINDNPPEFTSKHYFASVPEINSVGSEILKVLATSKDTGINAEINYS 2013
>gi|380803061|gb|AFE73406.1| protocadherin beta-14 precursor, partial [Macaca mulatta]
Length = 685
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL E E L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 190 LDRALDYEQEAELRLTLTALDGGSP-PKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 248
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 249 RPIGSWIVTISAKDLDAGNYGKISYTFFHA----SEDIRKTFEIN 289
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L
Sbjct: 430 NITVLVSDVNDNAPAFTRTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 485
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F + + I E +GT + SA D D+G NS ++ + PN F
Sbjct: 117 VKDINDHSPTFLDKEILIKISEGTTIGTTFLMESAQDLDVGSNSLQNYT-ISPNSHFHIK 175
Query: 154 ---SSDLRV--EWVINRSVD 168
SSD ++ E V++R++D
Sbjct: 176 IPDSSDRKIYPELVLDRALD 195
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ ++ G L G C + V D NDN P +S + IPE+ T+V + S D D G N
Sbjct: 314 QATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENAS-ETLVALFSVVDQDSGDN 372
Query: 140 SKL 142
++
Sbjct: 373 GRM 375
>gi|332234767|ref|XP_003266575.1| PREDICTED: protocadherin gamma-B2 [Nomascus leucogenys]
Length = 824
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 199 PDGRKYPEL-ILKHSLDREEHSFHQLALTAVDGGDP-PQSGTTQIRIQVTDANDNPPVFS 256
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 257 QDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYS 293
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 403 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 461
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P+F + Y + + E+ P G + +SASD DLG N ++S++ + +SDL+ ++
Sbjct: 462 GPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYS------IVASDLKPREIL 515
Query: 164 N 164
+
Sbjct: 516 S 516
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D ND P V+ +PED P GTV+ ++ D D G N
Sbjct: 333 EAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVFTPLPEDSPPGTVIALIKTRDRDSGEN 392
Query: 140 SKL 142
++
Sbjct: 393 GEV 395
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F ++ +L I E GT + A D+D+G NS
Sbjct: 133 AVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNS 179
>gi|402875690|ref|XP_003901630.1| PREDICTED: cadherin-24 isoform 3 [Papio anubis]
Length = 819
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|395736290|ref|XP_003776729.1| PREDICTED: protocadherin gamma-B7 [Pongo abelii]
Length = 808
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSTHHLVL---TALDGGDP-PRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT + V A+D D G+NS+++++
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYS 280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N ++S++
Sbjct: 431 PLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYS 490
Query: 146 ELEPNGLFSSDL 157
L +SDL
Sbjct: 491 ------LIASDL 496
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VVIEDVNDHAPQFQKDEINLEISESVSPGMGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C I V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIIEVLDENDNSPEIIITSLSDHIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDRDSGENGEVRCS 385
>gi|47215611|emb|CAG11642.1| unnamed protein product [Tetraodon nigroviridis]
Length = 839
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 33 GMY--APAFTFSIAK----FIANPTTRLYKNV---GTLKRALRTEEHWLKVENTKHKGSN 83
GMY + +SI++ F +P T + + G + R R EH+ V K
Sbjct: 158 GMYGNSAKLVYSISQGHPYFSVDPNTGVIRTALGPGDMDREQR--EHYQVVIEAKDMAGQ 215
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
G L GT I + D NDN P F S Y +PE GT V + A+D D+G N+++
Sbjct: 216 RGGLTGTTVVNITLTDVNDNPPRFTQSIYQFRVPESSESGTPVGRIRAADKDIGENAEMY 275
Query: 144 WNELEPNGLFSSDLRVEWVINRSV 167
+ + +GL + D+ + V
Sbjct: 276 FTIVSGDGLDTFDIFTDKATQEGV 299
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV---NSKLSWNELEPN 150
TI + D NDN P F Y+ S+PE +GT V V+A+DAD G+ ++KL ++ + +
Sbjct: 115 TIKLHDINDNEPHFSQEVYTGSVPERSDIGTSVIQVTATDADDGMYGNSAKLVYSISQGH 174
Query: 151 GLFSSD 156
FS D
Sbjct: 175 PYFSVD 180
>gi|344290788|ref|XP_003417119.1| PREDICTED: cadherin-8 [Loxodonta africana]
Length = 799
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVI---NRSVDQHTNK 173
+ V A+D D+G N++ S++ ++ +G LF SSD + + I R +D T K
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDGTALFEISSDAQAQDGIIRLRRPLDFETKK 349
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 61 LKRALRTE---EHWLKVE----NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
L+R L E + LKVE +T + S+ GP T I+VED +D P+F Y
Sbjct: 339 LRRPLDFETKKSYTLKVEAANVHTDPRFSSRGPFKDTATVKIVVED-SDEPPVFSSPTYL 397
Query: 114 LSIPEDVPVGTVVQVVSASDADL 136
L + E+ + +V+ V+A D D+
Sbjct: 398 LEVHENAAINSVIGQVTARDPDI 420
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|390459340|ref|XP_003732281.1| PREDICTED: protocadherin gamma-B7-like [Callithrix jacchus]
Length = 810
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 199 TLDRETQSAHHLVL---TALDGGAP-PRSGTAQIRILVIDANDNPPVFSQDVYRISLRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VP GT V V A+D D G+NS+++++
Sbjct: 255 VPPGTSVLRVKATDQDEGINSEITYS 280
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P+F S Y + +PE+ G + VSASD D G N +S++
Sbjct: 431 PLSSSKTITLHITDVNDNVPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGPNGHVSYS 490
Query: 146 ELEPNGLFSSDLRVEWV 162
+ +SDL V
Sbjct: 491 ------IVASDLESRTV 501
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + +E K +GS L C I V D+NDN+P ++ S I ED P G VV
Sbjct: 313 ERYTMNIE-AKDRGS----LSTRCKVIIEVLDENDNSPEITIASLSDQIMEDSPPGVVVA 367
Query: 128 VVSASDADLGVNSKLSWN 145
+ D D G N ++ +
Sbjct: 368 LFKTRDRDSGENGEVRCS 385
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+++ED ND+ P F + +L I E V G + SA D D+ +NS LS +L PN FS
Sbjct: 121 VMIEDVNDHAPQFQKDEINLEISESVSPGLGTILESAEDPDISMNS-LSKYQLSPNEYFS 179
>gi|148676973|gb|EDL08920.1| mCG112811 [Mus musculus]
Length = 337
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL EH+ V K G L G+ I + D NDN P FP Y
Sbjct: 89 GVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQ 148
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 149 LYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 187
>gi|73945922|ref|XP_541079.2| PREDICTED: cadherin-20 [Canis lupus familiaris]
Length = 801
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D PIF
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPIFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVSVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDAD 135
+Q VSA D D
Sbjct: 512 IQTVSAVDQD 521
>gi|380018274|ref|XP_003693057.1| PREDICTED: cadherin-87A-like [Apis florea]
Length = 1880
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G V + I + D N+N PIFP Y+ S+PE P+GTVV+ V+A+DAD G+N++L +
Sbjct: 685 GIFVDSAIVNITIRDVNNNAPIFPHELYTASLPEISPIGTVVEEVTATDADTGINAELVY 744
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N TII+ D+NDN+PIF + Y + V V V+ASD D+G N L +
Sbjct: 1467 GYVNVTIIILDENDNSPIFERNDYYAGVNSMANVNDFVTKVTASDLDVGDNGTLHY 1522
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLSW 144
V T T+ ++D ND P F +Y++ IPE+VP GT + ++ D D+G+NS S
Sbjct: 354 VSTAEATVTIKDVNDEPPTFNRREYNIEIPENVPNGTPLPHLDMTVKDPDVGLNSVFSL 412
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T + V + ND +P F Y+ S+ E+ P GT V VV A+D D G ++S++
Sbjct: 1018 LSATTKVIVTVINVNDQDPKFEKELYNASVKENSPPGTHVTVVKATDGDEGSFGEVSYS 1076
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L GT I VE+ ND P F + ED P+GTV + A+D D
Sbjct: 791 LTGTTTLMINVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPD 839
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
L T T+ + D NDN+P F Y+ + E P GT V ++A D D G
Sbjct: 469 LSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTPVITITAKDRDSG 519
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHW-----LKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F+ NP T V TL + L EE+ + +E+ G P +VG + +IV D
Sbjct: 87 FVVNPRT----GVITLAKPLDREENGTIRFRVTLEDEVPAGQQPN-IVG-VDAYVIVLDD 140
Query: 101 NDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADL 136
NDN P F Y ED+PVG T++ + D DL
Sbjct: 141 NDNPPRFLNVPYEAVAEEDLPVGSTILSGIKVIDPDL 177
>gi|354482507|ref|XP_003503439.1| PREDICTED: cadherin-18-like [Cricetulus griseus]
Length = 790
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 313
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 57 NVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
N GT+K + R E W + T + NPG L+ + I V D NDN P +Y
Sbjct: 436 NTGTIKTSKVLDREETPWYNITVTASENDNPG-LLSHVSVGIRVLDVNDNPPEL-AREYD 493
Query: 114 LSIPEDVPVGTVVQVVSASDAD 135
+ + E+ G V+ ++A+D D
Sbjct: 494 IVVCENSKPGQVIHTITATDKD 515
>gi|327276773|ref|XP_003223142.1| PREDICTED: cadherin-18-like [Anolis carolinensis]
Length = 790
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y L +PE VG+ V + A+DAD G N+ + ++ + +G
Sbjct: 266 PRFPQKHYQLYVPESAKVGSAVGKIKANDADTGSNADMKYSVINGDG 312
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREKKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|440899564|gb|ELR50851.1| Cadherin-20 [Bos grunniens mutus]
Length = 801
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L R + + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFERKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q +SA D D+ NS
Sbjct: 390 DPGSYFVEVPEDVAIGTTIQTISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|350578942|ref|XP_003121755.2| PREDICTED: cadherin-20 [Sus scrofa]
Length = 976
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 385 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 444
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 445 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 502
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 511 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 567
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 568 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 597
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I ++D NDN P F Y ++PE PVGT V V+A+DAD G ++++ ++ L+
Sbjct: 328 IKIQDINDNEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQP 387
Query: 152 LFSSD 156
FS D
Sbjct: 388 YFSVD 392
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 629 REEFSWHNITVLAMEMNNPSQ-VGSVSVTIKVLDVNDNAPEFP-RFYEGFVCENAKAGQL 686
Query: 126 VQVVSASDADLGVNSKLSWNELEP 149
+Q VSA D D N + + L P
Sbjct: 687 IQTVSAVDQDDPRNGQHFYYSLAP 710
>gi|145587090|ref|NP_001074768.1| cadherin 18 precursor [Mus musculus]
Length = 790
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 313
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|16553903|dbj|BAB71613.1| unnamed protein product [Homo sapiens]
gi|119586593|gb|EAW66189.1| cadherin-like 24, isoform CRA_a [Homo sapiens]
Length = 493
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|26337531|dbj|BAC32451.1| unnamed protein product [Mus musculus]
Length = 337
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|66773256|ref|NP_001019350.1| protocadherin 2 gamma 6 precursor [Danio rerio]
gi|51557475|gb|AAU06423.1| protocadherin cluster 2 gamma 6 [Danio rerio]
Length = 935
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
Query: 40 TFSIAK---FIANPTTRLY--KNVGTL--KRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
T+SI + FI + T++ KNV + K R ++ + + T G P P GT
Sbjct: 157 TYSIERNNHFILSVNTKVDGGKNVELVLDKELDREQQKEVTLILTAVDGGTP-PRSGTVA 215
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-------- 144
+ V D NDN P+F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 216 IHVTVLDANDNAPVFSQAVYKVSLPENSPVDTVVVTVSATDADEGQNGEVTYEFSRISKT 275
Query: 145 -NELEPNGLFSSDLRVEWVINRSV 167
N L +S D+RV+ I+ V
Sbjct: 276 ANTLFSLDQYSGDVRVKGPIDFEV 299
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF- 153
I ++D NDN P FP L I E+ G +V A DAD+G N +++ +E N F
Sbjct: 109 IQIQDVNDNTPTFPKETIKLEISENAVKGARFRVNEAHDADIGQNGVQTYS-IERNNHFI 167
Query: 154 -------SSDLRVEWVINRSVDQHTNK 173
VE V+++ +D+ K
Sbjct: 168 LSVNTKVDGGKNVELVLDKELDREQQK 194
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 396 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + + L SSD+
Sbjct: 452 NNKAGSSICSVSATDPDWRQNGTVVYT------LLSSDV 484
>gi|344268952|ref|XP_003406320.1| PREDICTED: cadherin-20 [Loxodonta africana]
Length = 801
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGIIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIIDGDGADTFDINTD 327
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 60 TLKRALRTEE---HWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
T+K+ L E + LKVE + + N GP T I VED D P+F Y
Sbjct: 336 TVKKPLSFESKKSYTLKVEGANSHLEMRFLNLGPFHDTTTVHISVEDV-DEPPVFEPGFY 394
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNS 140
+ +PEDV +GT +Q++SA D D+ NS
Sbjct: 395 FVEVPEDVTIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVAAVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVAVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D + + + L P
Sbjct: 512 IQTVSAVDQDDPHDGQRFYYSLAPEA 537
>gi|60678274|ref|NP_001012766.1| cadherin-20 precursor [Rattus norvegicus]
gi|81909553|sp|Q5DWV1.1|CAD20_RAT RecName: Full=Cadherin-20; Flags: Precursor
gi|60417793|dbj|BAD90596.1| Cadherin20 [Rattus norvegicus]
Length = 801
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGIIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +GSNP GP T IIVED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGSNPHVEMRFLNLGPFQDTTTVHIIVEDV-DEPPVFEPR 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVTIGTTIQIISAKDPDMTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y I E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVAATIKVLDVNDNAPEFP-RFYEAFICENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|392338637|ref|XP_003753587.1| PREDICTED: cadherin-18 [Rattus norvegicus]
gi|392345462|ref|XP_003749271.1| PREDICTED: cadherin-18 [Rattus norvegicus]
Length = 790
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P FP Y L +PE VG+ V + A+DAD G N+ ++++ +G+
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTYSITNGDGI 313
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|410948459|ref|XP_003980956.1| PREDICTED: protocadherin alpha-4 [Felis catus]
Length = 835
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP P+ G C I V D NDN P V+ SLS+PED P+GTV+ ++S +D D G N ++
Sbjct: 327 NP-PMFGHCTILIEVLDINDNAPELLVTSLSLSVPEDAPLGTVIALISVTDRDAGGNGQV 385
Query: 143 SWN 145
+ +
Sbjct: 386 TCS 388
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q L I E + + + A DAD+G N+ L++ +L PN FS +
Sbjct: 123 VKDINDNPPMFPATQKKLFISETRALDSHFSLEGAYDADIGANALLTY-KLSPNEYFSLE 181
Query: 157 L--------RVEWVINRSVDQH 170
+ +E V+ +S+D+
Sbjct: 182 VPTNEEQVKPLELVLKKSLDRE 203
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F ++Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LSATASVSVEVADVNDNAPAFAQAEYTVFVKENNPPGCHIFTVSARDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT I V D NDN P+F + + + + E+ GT+V ++ASD D G NS + ++
Sbjct: 222 LTGTTELHITVLDANDNAPVFDKAVHRVKLLENSRNGTLVIRLNASDLDEGSNSHILYS 280
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K +G L R E K T H P + I++ D NDN
Sbjct: 3131 KFSLDKETGVLKTIGQLDR-----ETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDN 3185
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F + YS ++PEDV VGT+V V A+D D+G+N K+ +
Sbjct: 3186 APKFTMQTYSATLPEDVEVGTLVTKVHATDDDIGINRKIRY 3226
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALR-TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + G L R + E ++ ++ KG++ PL ++V+D NDN
Sbjct: 941 FRVDPVTGVLTVFGRLDRERQDVYELRIRAQDNGGKGADAPPLYSDALVRVMVDDVNDNA 1000
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSD 156
P F +S Y++ I EDVPV TVV VV A+D D G + + + +E G F D
Sbjct: 1001 PTFALSSYTVKIREDVPVWTVVAVVDATDPDEGGGGDVEYFLSDAMESEGYFKVD 1055
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPL--VGTCNTTIIVE--DQNDNNPIFPVSQY 112
NV L R R + + L+V T ++ + L V +TT++V D ND NP+F ++Y
Sbjct: 148 NVDVLNRE-RKDRYVLEVRATLNRKDDGKGLATVLEADTTVVVTILDTNDLNPLFYPTEY 206
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+I ED P+ + V A DADLG N ++ ++ E F+
Sbjct: 207 EATITEDTPMHRSILRVIAEDADLGRNGEIYYSLAEETDQFA 248
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T + +K L E+ K N +N CN + V D+NDN P
Sbjct: 1780 FFVNPSTGII----VIKNELDYEK--TKFYNLTIAATNMASAKAHCNVIVHVLDRNDNAP 1833
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE 148
F + YS I E +G++V V+ A DAD +N+ L+++ +E
Sbjct: 1834 RFLQAAYSGEISEGATIGSLVLTNTSTPLVIKAEDADSELNALLNYDIVE 1883
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL ++ V D+ND+ P F + Y +S+ E+V GT + + A D DLG N ++ ++
Sbjct: 2856 PLTALAEISLQVLDENDHAPKFESNPYGISVAENVEEGTSILKIIAHDDDLGSNGEVRYS 2915
Query: 146 ELEPNGLFSSDL 157
F SD+
Sbjct: 2916 -------FGSDI 2920
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y SI ED +G
Sbjct: 3360 RARDYFLTIQAVD--GGIP-PLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 3416
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D N +S+
Sbjct: 3417 VIQVFANDLDSEENGNVSY 3435
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F S+ + I E+ P GT V ++A D D G N+ +S++
Sbjct: 514 INVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYISYS 564
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 39 FTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
FTFSI F+ N TT L G EH L+V T P L T
Sbjct: 1250 FTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEV--TVRDDGWPS-LSSTTR 1306
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D ND+ P F Y++ IP + V A D D+G N K+ ++
Sbjct: 1307 VVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLAKDKDIGDNGKIQYS 1359
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LKR+L E H L T + + V D NDN P F Y+ S+ E
Sbjct: 2418 LKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHA 2477
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
G V VVSASD D V+ KL++
Sbjct: 2478 ERGQFVTVVSASDPDY-VDEKLTY 2500
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I + D NDN P F S S I E GT V +ASDADLG N++++++ + +
Sbjct: 883 ITILDVNDNAPRFDKSLASFRISETALNGTNVWRANASDADLGENARVTYSLVTE----T 938
Query: 155 SDLRVEWV 162
+D RV+ V
Sbjct: 939 NDFRVDPV 946
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNS 140
I V D NDN P+F +S Y+ + ED P+G TV+Q V +DAD+ N+
Sbjct: 3491 IEVLDANDNPPLFSLSNYTAVVQEDKPLGHTVLQFV-VTDADIEPNA 3536
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN P+F Y + +PE P+ T V + +DAD G N+
Sbjct: 411 DLNDNAPVFSREIYEVKVPETAPINTPVIQLKVTDADEGRNA 452
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L+ + + V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 3273 LMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYS 3331
>gi|326429811|gb|EGD75381.1| cadherin [Salpingoeca sp. ATCC 50818]
Length = 3697
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T T+ + D+NDN P+F + Y S+ EDV +G V VSA+DAD GVN+ + +
Sbjct: 2188 LQATATITVTLSDENDNAPVFSNATYMFSLAEDVSLG-VFGSVSATDADTGVNALIEYTL 2246
Query: 147 LEPNGLFSSD 156
L GLF+ D
Sbjct: 2247 LTSTGLFAID 2256
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFP-VSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+ ++ G +GT + + VED NDN+P+F Y++S+ E+ PVGT V+ V A DAD GV
Sbjct: 2598 QAADAGGRIGTVDIQVAVEDINDNDPVFQNAGTYAISVDENTPVGTEVERVLALDADSGV 2657
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + + D NDN P F +QYS+S+ E P+G V +SA+DAD G N+ +++
Sbjct: 2819 TAMAVVTLTDINDNAPEFSQAQYSVSLAESRPLGRVFAGISATDADAGANAAITY 2873
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGT 124
R E W+ G NP P+ T ++ V D ND P+F P L++ E+ +
Sbjct: 2380 REELTWVNCTVVASDGGNPVPMTSTAALSVRVRDVNDVAPVFTPAGPVDLTLAENNAAPS 2439
Query: 125 VVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINRSVDQHTNK 173
+ +S SD D LS + + GLF+ E + RS+D ++
Sbjct: 2440 TLYQLSVSDQDTVGTVALSLDN-DFGGLFTISESNELQVTRSLDYEADQ 2487
Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPV-SQYSLSIPEDVPVGTVVQVVSASDAD 135
T + G++P PL G+ + V+D ND P FP +Q + E GTV+ V A+DAD
Sbjct: 1853 TAYDGASPLPLSGSATVRVYVQDVNDMPPQFPPGTQRAPDFSEGNAAGTVLTTVQATDAD 1912
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+N L+ + + D NDN P F V+Q + E+ VGT+V V +D D GVN+
Sbjct: 1423 ANASGLLTITEVLVTITDVNDNTPQF-VTQSVFDVAENAAVGTLVAKVVVTDQDEGVNAA 1481
Query: 142 LSWNELEPNG 151
L+++ P+
Sbjct: 1482 LAYSLQGPDA 1491
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+P P T + I V D NDN P+F + S+ + E+ G V+ V++A+DAD
Sbjct: 2918 SPMPQSSTASVAITVLDVNDNAPVFTPAAPSMIVYENEEAGPVIGVLAATDAD 2970
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 97 VEDQNDNNPIFPVS-QYSLSIPEDVPVGTVVQVVSASDAD 135
V D ND P+F Q + ++ ED P+GTVV V A+DAD
Sbjct: 1976 VGDINDETPVFSTPPQQTFNVTEDTPIGTVVGRVMAADAD 2015
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
+ G T T+ V D ND P+F S Y ++ E++ GT V V A+D D
Sbjct: 1746 DSGARTATREYTVSVTDINDKRPVFDTSVYMANVQENLAGGTFVTTVQATDGD 1798
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 24 RYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVG--TLKRALRTEEHWL-KVENTKHK 80
R L L SG++ ++ +++ + + N G TL AL E+ L K +
Sbjct: 2647 RVLALDADSGVFG-----AVVQYVTDSALFVVDNSGVITLGAALDYEDDMLLKSFTIEVF 2701
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVN 139
+ G + + + D NDN +F S Y+ S+PE +GT V++ + SDAD V
Sbjct: 2702 AVDGGNRQTSVTIAVTINDLNDNPTVFDDSTYTGSVPEHSSMGTHVIRHIRLSDADTVVT 2761
Query: 140 S 140
S
Sbjct: 2762 S 2762
Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 63 RALRT----EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
RALRT +++ V + P L I V D+NDN P F + +++ E
Sbjct: 2999 RALRTFDREQQNQYSVTVRVYDDGAPAQLWSDTELRIFVGDRNDNAPEFGCPKAGMAVTE 3058
Query: 119 DVPVGTVVQVVSASDAD 135
VG V + A DAD
Sbjct: 3059 AAQVGDVFATIRAYDAD 3075
>gi|224045074|ref|XP_002199261.1| PREDICTED: cadherin-20 [Taeniopygia guttata]
Length = 798
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 220 GLIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNISLSDVNDNPPRFPQKHYQ 279
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E P+ + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 280 MSVLESAPISSTVGRVVAKDLDEGINAEMKYSLVDGDGLDVFDINTD 326
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+++ L E K K +G+NP GP T I VED D P+F S
Sbjct: 335 TVRKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFRDTTTVHISVEDV-DEPPVFETS 391
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 392 IYFVEVPEDVEIGTTIQIISAKDPDVTNNS 421
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 106 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 162
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 163 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 218
>gi|410948487|ref|XP_003980970.1| PREDICTED: protocadherin beta-15-like [Felis catus]
Length = 550
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R ++ L + T G +P P GT I+V D NDN P F + Y
Sbjct: 189 RKYPELVLDKELDREKQAELSLTLTALDGGSP-PRSGTAQVHILVLDVNDNAPEFAQTLY 247
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ +PE+ PVGT+V VSA D D G N ++S++
Sbjct: 248 QVQVPENSPVGTLVVKVSARDLDTGTNGEISYS 280
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+G ++V D ND++P FP + +L I E P GTV + A D D+G N
Sbjct: 114 LGVFRAELLVRDINDHSPEFPEREMTLKISETSPPGTVFPLKKAQDLDVGNN 165
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G L G C+ +I V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 321 ATDGGGLSGRCSVSIEVVDVNDNFPELTISSLTSPIPENSP-ETEVALFRIRDRDSGDNG 379
Query: 141 KLS 143
+++
Sbjct: 380 RMT 382
>gi|301609759|ref|XP_002934429.1| PREDICTED: neural-cadherin-like [Xenopus (Silurana) tropicalis]
Length = 2520
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
++ F +P T + V + R + +E+ + ++ T PL+G C I++ D+N
Sbjct: 485 TLPAFSIHPDTGIITTVQSFDRE-KQKEYPITIKATDQAAE---PLIGLCQINILILDEN 540
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DN+P F ++Y + ED VGT V+A DAD G N+ +++
Sbjct: 541 DNDPSFENNRYEYFLREDTSVGTSFLQVAAHDADYGSNASITY 583
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL I V D NDN P F S Y S+ E + +GT V VSA+D DLG+N +++
Sbjct: 735 PVPLAAFTTVYINVTDVNDNVPFFTSSIYEASVTEGLGLGTFVLQVSATDQDLGLNGEIT 794
Query: 144 WNELEP-NG---LFSSDLRVEWVINRSV 167
++ LE NG LF D + + SV
Sbjct: 795 YSILEDRNGDHVLFHIDPQTGSIFTASV 822
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTK-HKGSNPG----PLVGTCNTTIIVEDQ 100
F +P T R R+ + L+++++ + + PG P T I + D
Sbjct: 808 FHIDPQTGSIFTASVFDRETRSS-YLLEIKSSDGSESARPGKHGQPNSDTAYVRIFISDV 866
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NDN P F S Y +++ ED VG +V V+A D D GVN+K+ +
Sbjct: 867 NDNKPSFTQSAYYVNVDEDQDVGYIVITVTAHDPDEGVNAKIRY 910
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSN-PGPLVGTCNTTIIVEDQND 102
F+ +P L + +L + E+ L V T S P L T + V+D N+
Sbjct: 373 GNFVIDPQKGLIRLHSSLLPSHHETEYILYVTATDDNSSGGPSSLTSTATVIVSVDDINN 432
Query: 103 NNPIF-PVSQYS--LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P+F + Y ++ E+ P GT V V A DAD GVN ++ + + G
Sbjct: 433 NKPVFHKCASYRDHAAVLENQPPGTFVLQVEAKDADYGVNGQVKYGMVHKEG 484
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 95 IIVEDQNDNNPIFPVSQYSLS-IPEDVPVGTVVQVVSASDADLGVNSKLS---WNELEPN 150
I ++D NDN P+F LS + E+V +GTV+ V ASDAD G+N ++ W +
Sbjct: 1284 IELQDCNDNAPVFLAPFVQLSPVLENVTIGTVLTQVIASDADSGINGQIRYSIWPSSDVL 1343
Query: 151 GLFSSD----LRVEWVINRSVDQH 170
G F D ++V+ ++R VD
Sbjct: 1344 GEFFVDPAGFVKVKKALDREVDSQ 1367
>gi|402871235|ref|XP_003899579.1| PREDICTED: cadherin-9 [Papio anubis]
Length = 789
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ + E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYRIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|355691237|gb|EHH26422.1| Cadherin-9 [Macaca mulatta]
gi|355749841|gb|EHH54179.1| Cadherin-9 [Macaca fascicularis]
gi|380787565|gb|AFE65658.1| cadherin-9 preproprotein [Macaca mulatta]
Length = 789
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ + E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYRIAEGDG 312
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|340729964|ref|XP_003403262.1| PREDICTED: cadherin-87A-like [Bombus terrestris]
Length = 1903
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+N G V + I + D N+N P+F Y+ SIPE P+GTVV+ V+A+DAD G+N++
Sbjct: 704 ANDGIYVDSATVNITIRDVNNNAPVFTQELYTASIPEISPIGTVVEEVTATDADTGINAE 763
Query: 142 LSW 144
L +
Sbjct: 764 LVY 766
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLS 143
V T T+ ++D ND P F +Y++ IPE+VP GT + ++ D D+G+NS S
Sbjct: 376 VSTAEATVTIKDVNDEPPTFNRREYNIEIPENVPNGTPLPHLDMTVKDPDVGLNSVFS 433
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N TI + D+NDN PIF + Y + V V V+ASD D+G N L +
Sbjct: 1489 GHVNVTITILDENDNLPIFERNDYYAGVNSMANVNDFVTKVTASDLDVGDNGTLHY 1544
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT I VE+ ND P F + ED P+GTV + A+D D L++
Sbjct: 813 LTGTTTLMINVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPDSANLEALNFAI 872
Query: 147 LEP 149
EP
Sbjct: 873 SEP 875
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+NP L T T+ + D NDN+P F Y+ + E P GT V ++A D D G
Sbjct: 487 TNPK-LSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTTVLTITAKDRDSG 541
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEH-----WLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F+ NP T V TL + L EE+ + +E+ G P +VG + +IV D+
Sbjct: 109 FVVNPRT----GVITLAKPLNREEYDTIRFRVTLEDEVPTGQQPN-IVG-VDAYVIVLDE 162
Query: 101 NDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADL 136
NDN P F Y ED+PVG T++ + D D+
Sbjct: 163 NDNPPRFLNVPYEAVAEEDLPVGSTILPGIRVMDPDM 199
>gi|334311659|ref|XP_003339648.1| PREDICTED: cadherin-22-like [Monodelphis domestica]
Length = 816
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 47 IANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPI 106
+ N T + V L R + E + + + T G G L G+ TI++ D NDN P
Sbjct: 212 VDNKTGVIRTAVADLDRE-KQERYEVVIRATDMAG-QLGGLSGSTTVTIVITDVNDNPPR 269
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
FP Y SI E P+GT + V A D+D+G N+ +++ + G
Sbjct: 270 FPQKMYQFSIVETAPIGTAIGRVKAEDSDVGENTDMTYQLKDEGG 314
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G+ + V+D NDN P+F ++ Y SI E++PVGTVV A+D D G+N+KL +N
Sbjct: 2459 PLTGSGIVRVEVQDINDNGPVFELNSYHASIEENLPVGTVVLQPKATDKDEGLNAKLRFN 2518
Query: 146 EL 147
L
Sbjct: 2519 LL 2520
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPT L + V L R L + V N + P T I + D+NDN+P
Sbjct: 2210 FSLNPTDGLLRVVNALDRELCSS----YVLNITAQDRGEPPQSTTTRLLIRILDENDNSP 2265
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
+F QYS S+ E+ +G +V VSA+D D G N ++ ++ L
Sbjct: 2266 VFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIL 2307
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 61 LKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R +R+E + L VE G +P PL G + +I + D ND+ P+F + Y S+ E
Sbjct: 991 LQRPIRSEPNSILSVELMATDGGSP-PLFGKLSLSIAIVDVNDHTPVFDHTSYETSLLES 1049
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
V ++ASD+D+G N+++S++ +E NG
Sbjct: 1050 TKVNARFFGLAASDSDVGENARISYSIIEGNG 1081
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TI+V D+NDN P F S +S+PE P+GT + ASDAD G+NS++ ++
Sbjct: 1348 PLSSNTTITIVVLDENDNAPEFTQSSSEVSVPETSPIGTELMRFRASDADQGLNSQVVFS 1407
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 56 KNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115
+ G L R R + + + G +P P +G + + D NDN PIF S YS++
Sbjct: 233 ETTGNLDRESRG---YYNLNISARDGGSP-PRMGYLQVNVTILDVNDNPPIFDHSDYSVN 288
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ E V GT V V ASD+D+G N KL++ E F+ D
Sbjct: 289 LNETVQPGTPVLTVMASDSDMGDNGKLTYYLAETEHQFTVD 329
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D+NDN P F S ++ SIPE+ P T V ++A D D+G N++LS+ F+
Sbjct: 1129 IHVLDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDKDIGRNAELSFYLATQTQDFT 1188
Query: 155 SDLRVEWVIN-RSVDQ 169
D R ++ RS D+
Sbjct: 1189 IDTRNGFIKTLRSFDR 1204
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 38 AFTFSI-----AKFIANPTTRLYKNVGTLKRALRTE-EHWLKVENTKHKGSNPGPLVGTC 91
+ TFS+ KF+ PTT TL R +++ + ++V + G
Sbjct: 1836 SITFSLVSGHNGKFLLEPTTGNLILNDTLDRETKSKYDVRIRVSD--------GVQYTET 1887
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
N I V D NDN P+F + YS IPE+ P G V V A+D DLG N +S+
Sbjct: 1888 NIIIEVNDTNDNPPMFDETVYSFDIPENAPKGFQVGQVVATDNDLGQNGLVSY 1940
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T + I V D ND+ P+F S+Y+ + E P G+ V ++A+D D GVN+++ + L
Sbjct: 486 ATAHLIIDVNDVNDHEPVFEKSEYTAVLSELAPKGSFVASIAATDEDTGVNAQIHYEILS 545
Query: 149 PNGL 152
N L
Sbjct: 546 GNEL 549
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 38 AFTFSIA---KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTT 94
++TFS KF P + G L R + +E+ LKV + P+ T
Sbjct: 2930 SYTFSENPGNKFKIEPQSGNITVAGHLDRE-QQDEYILKVVASDGAWRAETPI------T 2982
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPE-DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
I ++DQNDN P F S YS S PE V V Q+++ G NS +S++ +P+ +F
Sbjct: 2983 ITIQDQNDNAPEFEHSFYSFSFPELQHAVAFVGQIIATDRDKQGPNSVISYSLQQPSPMF 3042
Query: 154 SSD 156
S D
Sbjct: 3043 SID 3045
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
IIV +N + P F +Y + +PE+VP+G+ + V A+D DLG N L + G+
Sbjct: 3198 IIVTGENRHTPEFSARRYQVIVPENVPIGSTIITVVATDPDLGPNGILRF------GISG 3251
Query: 155 SDLRVEWVIN 164
+ R ++ +N
Sbjct: 3252 GNERQDFSVN 3261
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F NP T + TL L EE H++ + + G P L T V D NDN
Sbjct: 1951 FSLNPQTGML----TLTARLDYEEVQHYILLVQAQDNG-QPS-LSNTITVYCNVLDLNDN 2004
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PIF YS I E+VP+G V VSA D D G N + +
Sbjct: 2005 APIFDPMSYSSEIFENVPIGMEVVTVSAKDIDSGNNGLIEY 2045
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIF-PVSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+ P P + + D+ND P F P Q ++++ ED P +V+ + A+D D G
Sbjct: 582 RDGGPNPKYAYTQLKVTILDENDEAPQFGPHQQINVTLSEDAPPQSVITTLMATDHDQGT 641
Query: 139 NSKLSWNELEPN--GLFSSDLRVEWVINRSVDQHT 171
N +S+ +L PN L+ ++ + + +HT
Sbjct: 642 NGSVSY-QLAPNMERLYPQQFAIDSITGQLTTRHT 675
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L GT + I + D+NDN P F +SL++ E+ +G+ V V++SD DLG N+ S+
Sbjct: 2875 LTGTASVMIHLLDKNDNPPKF-TRLFSLNVTENAELGSFVIRVTSSDLDLGANANASY 2931
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 39 FTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTII 96
F++SI N + R+ + G +K A + + N + G P G+ TI
Sbjct: 3562 FSYSIINGNLNQSFRIDAHSGEIKTAALLDRESIAHYNLIIGAIDTGLPPQTGSAELTIT 3621
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
+ D NDN P F I E+ P GT + ++A+D DL
Sbjct: 3622 ITDVNDNGPTFAPEALQGYIAENEPPGTSIMTLAATDPDL 3661
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T TI+++D ND P+F VS S+ E+V + TVV V A D D G N + ++
Sbjct: 2136 LSSTVQVTILIKDVNDEAPVF-VSANETSVMENVSINTVVMAVKAVDYDEGRNGYIDYS 2193
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T TII+ D NDN P+F ++Y I E+ P GT V A+D D N+ + +
Sbjct: 3295 LTDTAILTIILTDVNDNPPVFNQTEYHSYIAENKPTGTFVFQAHATDKDSPKNAIIQYAF 3354
Query: 147 LEPNG 151
L P+G
Sbjct: 3355 L-PSG 3358
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 8/150 (5%)
Query: 3 LNLIGKGYEYN--HWSISKLLESRYLHLRPKSGMYAPAFTFSIA-KFIANPTTRLYKNVG 59
+N G +E N H SI + L + L+PK+ + + TR + N
Sbjct: 2473 INDNGPVFELNSYHASIEENLPVGTVVLQPKATDKDEGLNAKLRFNLLGEHMTRFHINTD 2532
Query: 60 T---LKRAL--RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
T AL R E ++ S P + N TI V D NDN P F S Y +
Sbjct: 2533 TGEITTAALLDREETDTYRLTLMAQDSSITEPRATSVNLTIKVVDVNDNVPQFDSSNYKI 2592
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
++P+ + V A D D GVN+++ +
Sbjct: 2593 AVPDKMGPDRFVFGAKALDLDEGVNARVQY 2622
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSL--SIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
G C I V D NDN P F S+ S+PE+ VG + + D D G N+++++N
Sbjct: 913 GKCLVRISVIDVNDNAPSFAQDLPSMLISVPENTAVGQEIYLPRVRDRDTGNNNRITYNL 972
Query: 147 LE-PNGLF 153
PN LF
Sbjct: 973 THNPNELF 980
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+++ D NDN P+FP + I E + + T + V+A D D +N K+++
Sbjct: 1462 VLIVDDNDNAPVFPSTAIVRQIKEGIALKTPIVTVTADDPDSELNGKVTY 1511
>gi|190336742|gb|AAI62537.1| Pcdh2g12 protein [Danio rerio]
Length = 946
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 48 ANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
A T + Y + ++ R ++ + + T G P P GT + V D NDN P+F
Sbjct: 184 AKTTGKFYGELVLERQLDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPVF 242
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 243 SQAVYKVSLPENSPVDTVVVTVSANDADEGQNGEVTY 279
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 408 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 463
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 464 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 496
>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Takifugu rubripes]
Length = 2876
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T + + + +G +PGP T I VED+NDN P F +Y + +PE+V V T +
Sbjct: 260 TRDQYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSEKRYVVQVPENVAVNTKI 319
Query: 127 QVVSASDADLGVNSKLSWNELEPN 150
V A+D D G N+K+ ++ + N
Sbjct: 320 VQVEATDKDEGNNAKVHYSIISGN 343
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
IIV+D NDN P F Y ++ ED PV T V +SASD D G N ++S+
Sbjct: 704 IIVQDANDNTPQFLRDMYQGTVFEDAPVYTSVLQISASDRDSGTNGRVSY 753
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
G ++ A + + + V K + G PL + ++V+D NDN P+F + +
Sbjct: 772 GIIRTARKLDRENVPVYTLKAFAVDRGVPPLKAPVSIHVVVQDINDNAPVFEKDVLFIDV 831
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-------GLFSSDL 157
E+ PVG+VV ++A+D D G N+++ + +E N +F+ DL
Sbjct: 832 EENSPVGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDL 879
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R ++ + H KV T H T T+ V D ND++P+F +Y +SI E+V
Sbjct: 150 LDREIK-DTHVFKVTVTDHGSPK---RAATSYLTVTVSDTNDHSPVFEQIEYRVSIRENV 205
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
VG V + A+D D N+ + + + +G+ S
Sbjct: 206 EVGFEVMTIRATDGDAPSNANMIYKIVNDDGVSS 239
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I V D N + P+F + Y +++ E+ PVG V ++SA+D D G N+
Sbjct: 587 AASDGTRYDTAQVFINVTDANTHRPVFQSANYQVTLGEEKPVGHTVALISATDEDTGENA 646
Query: 141 KLSW 144
++++
Sbjct: 647 RITY 650
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + + +I V D NDN P F YSL I ED VGT V V+A D D VNS +++
Sbjct: 491 MSSSASVSITVLDVNDNVPAFTEKVYSLKINEDAIVGTSVLTVTAVDRD--VNSVVTY 546
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P G+ NT+ + Q + P F + Y +S+PE+ P GT V + A+D D G +L +
Sbjct: 62 APGSGSENTSKRSKRQANTPPQFQLPNYQVSVPENEPAGTRVITLKATDPDDGEAGRLEY 121
Query: 145 N 145
+
Sbjct: 122 S 122
>gi|99031783|pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3
Length = 322
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 174 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 233
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 234 IGRVKANDQDIGENAQSSYDIIDGDG 259
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 113
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 114 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 156
>gi|395508259|ref|XP_003758430.1| PREDICTED: cadherin-8 [Sarcophilus harrisii]
Length = 763
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 199 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 258
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINR 165
+ V A+D D+G N++ S++ ++ +G LF +SD + + I R
Sbjct: 259 IGRVKANDQDIGENARSSYDIIDGDGTALFEITSDAQAQDGIIR 302
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 110 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 169
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 170 VYSILEGQPYFS 181
>gi|350402296|ref|XP_003486436.1| PREDICTED: cadherin-87A-like [Bombus impatiens]
Length = 1897
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
+N G V + I + D N+N P+F Y+ SIPE P+GTVV+ V+A+DAD G+N++
Sbjct: 698 ANDGIYVDSATVNITIRDVNNNAPVFTQELYTASIPEISPIGTVVEEVTATDADTGINAE 757
Query: 142 LSW 144
L +
Sbjct: 758 LVY 760
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLS 143
V T T+ ++D ND P F +Y++ IPE+VP GT + ++ D D+G+NS S
Sbjct: 370 VSTAEATVTIKDVNDEPPTFNRREYNIEIPENVPNGTPLPHLDMTVKDPDVGLNSVFS 427
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N TI + D+NDN PIF + Y + V V V+ASD D+G N L +
Sbjct: 1483 GHVNVTITILDENDNLPIFERNDYYAGVNSMANVNDFVTKVTASDLDVGDNGTLHY 1538
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GT I VE+ ND P F + ED P+GTV + A+D D L++
Sbjct: 807 LTGTTTLMINVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPDSANLEALNFAI 866
Query: 147 LEP 149
EP
Sbjct: 867 SEP 869
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+NP L T T+ + D NDN+P F Y+ + E P GT V ++A D D G
Sbjct: 481 TNPK-LSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTTVITITAKDRDSG 535
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEH-----WLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F+ NP T V TL + L EE+ + +E+ G P +VG + +IV D+
Sbjct: 103 FVVNPRT----GVITLAKPLNREEYDTIRFRVTLEDEVPTGQQPN-IVG-VDAYVIVLDE 156
Query: 101 NDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADL 136
NDN P F Y ED+PVG T++ + D DL
Sbjct: 157 NDNPPRFLNVPYEAVAEEDLPVGSTILPGIRVMDPDL 193
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T + V + ND +P F Y+ S+ E+ P GT V V A+D D G ++S++
Sbjct: 1034 LSTTAKVIVTVINVNDQDPKFEKELYNASVKENSPPGTHVTTVKATDGDEGPFGEISYS 1092
>gi|297295295|ref|XP_001091293.2| PREDICTED: protocadherin beta-10 isoform 2 [Macaca mulatta]
Length = 809
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L + T G +P P GT I+V D NDN P F + Y PE
Sbjct: 208 LDKALDREEQGELSLTLTALDGGSP-PRSGTSTIGIVVLDVNDNAPQFAQALYETQAPES 266
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G ++ VSA D D GVN+++S++ + S ++R + IN
Sbjct: 267 SPIGFLIVKVSAEDIDSGVNAEVSYSFFDA----SENIRTTFQIN 307
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N T++V D NDN+PIF + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 448 NITVLVSDINDNSPIFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLLPQD 507
Query: 152 L 152
L
Sbjct: 508 L 508
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G L C + V D NDN P VS + IPE+ P TVV V S D D G N ++
Sbjct: 337 GGLSAICRVLVEVMDVNDNAPEITVSSITSPIPENAP-ETVVMVFSIQDIDSGDNGRI 393
>gi|397506456|ref|XP_003823743.1| PREDICTED: cadherin-11 isoform 2 [Pan paniscus]
Length = 693
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|344255333|gb|EGW11437.1| Cadherin-20 [Cricetulus griseus]
Length = 805
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADTFDINTD 327
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHINVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 EPGFYFVEVPEDVTIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYIATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
VG+ TI V D NDN P FP Y I E+ G ++Q VSA D D N + + L
Sbjct: 479 VGSVAVTIKVLDVNDNAPEFP-RFYEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYSL 537
Query: 148 EPNG 151
P
Sbjct: 538 APEA 541
>gi|326917617|ref|XP_003205093.1| PREDICTED: cadherin-9-like [Meleagris gallopavo]
Length = 641
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 58 VGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
G +K AL E + V K G G L GT I + D NDN P FP S Y
Sbjct: 66 TGIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTY 125
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
S PE P GT + + A+D DLG N+++ ++
Sbjct: 126 QFSSPESAPPGTPLGRIKANDPDLGENAEIEYS 158
>gi|300798333|ref|NP_001179064.1| cadherin-20 [Bos taurus]
gi|296473764|tpg|DAA15879.1| TPA: cadherin 20, type 2 [Bos taurus]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L R + + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFERKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q +SA D D+ NS
Sbjct: 390 DPGSYFVEVPEDVAIGTTIQTISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|126290902|ref|XP_001377356.1| PREDICTED: protocadherin alpha-13 [Monodelphis domestica]
Length = 819
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP P+ G C + + D NDN+P V+ SL + ED P+GTV+ ++S SD D G N ++
Sbjct: 323 NP-PMAGHCTVLVEILDTNDNSPQVSVTSLSLPVREDSPLGTVIALISVSDGDSGANGQV 381
Query: 143 SWNELEPNGLFS 154
+ + L P G F+
Sbjct: 382 TCS-LSPTGPFT 392
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+FP ++ ++I E P T + ASDAD+G ++ L++ L P+ F+ D
Sbjct: 119 IKDINDNPPMFPENKKEINIAESRPPDTRFPLDGASDADVGESAALTY-RLSPSEYFALD 177
Query: 157 LR--------VEWVINRSVDQHTNK 173
++ + ++ +S+D+ +
Sbjct: 178 VQSNSEQTTSLSLILRKSLDREQTQ 202
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 61 LKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+++L +T++H L + T G P L G+ I V D NDN P F S Y + +
Sbjct: 192 LRKSLDREQTQQHHLLL--TATDGGKP-ELTGSVQLLIKVLDVNDNAPQFDQSVYKVRML 248
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ GT+V ++ASDAD G N + +
Sbjct: 249 ENALNGTLVIQLNASDADDGTNGNILY 275
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T + ++ +ED NDN P F Y++ + E+ P G+ + VSASD D NS +S++
Sbjct: 434 TASISVDIEDVNDNAPSFEKPVYTVFVKENNPPGSHIFTVSASDPDAQENSLVSYS 489
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
+ R+L E V S L GT ++V+D NDN P F Y ++PED
Sbjct: 661 VTRSLDRETKERFVLTITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVPEDA 720
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
P GT V +V+ASDAD N+ +S+ + N F+
Sbjct: 721 PTGTDVLLVNASDADASTNAVISYRIIGGNSQFT 754
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 234 FFLNPVTGVFN----LTRVLDYESQQYYILTVRAE--DGGGQFTTIRVYFNILDVNDNPP 287
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVI 163
+F ++ YS S+ E++P+G+ V V + +DAD G+NS+L+++ + G F+ D +
Sbjct: 288 VFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFAVDKNGVLTV 347
Query: 164 NRSVDQHT 171
+S+D+ +
Sbjct: 348 LKSLDRES 355
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 60 TLKRALRTEEH--WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
T+ R L E+ +L +GS P T +I++ D ND P F +S YS+++P
Sbjct: 555 TVARPLDREKTSTYLLTVQAADRGSTP--RTDTSTVSIVLLDSNDFVPTFELSPYSINVP 612
Query: 118 EDVPV--GTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVINRSVDQHTNK 173
E++ TV+QVV A D D G+NSKLS+ + N F+ E + RS+D+ T +
Sbjct: 613 ENLGALPRTVLQVV-ARDDDQGLNSKLSYVLVGGNEDNAFTLSAGGELRVTRSLDRETKE 671
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND++P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 174 ITVSDVNDHSPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 233
Query: 153 F 153
F
Sbjct: 234 F 234
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T++++ V GS P PL + + + V D NDN
Sbjct: 751 SQFTINPSTGQIITSALLDR--ETKDNYTLVVVASDAGS-PEPLSSSTSVLVTVTDVNDN 807
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G+ V V+ +DAD+G NS+L ++
Sbjct: 808 PPRFQHHPYVTHIPSTTSPGSFVFAVTVTDADIGPNSELHYS 849
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F +Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 1521 GYCSVTVNVIDVNDNSPVFLPDEYLPTVLENAPSGTTVIHLNATDADSGTNAVIAY 1576
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + + L P
Sbjct: 377 TAQVSIILLDVNDNPPTF-LSPRLTYIPENTPLDTVVFKAQATDPDSGPNSYVEYALLSP 435
Query: 150 NG 151
+G
Sbjct: 436 SG 437
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
D NDN+P F + Y + + ED GT V V A+DAD G N ++ + ++ N D R
Sbjct: 489 DINDNSPAFAQALYRVEMSEDTLTGTDVVQVCAADADEGTNGQVRYGIVDGNA--DQDFR 546
Query: 159 VEWV 162
++ V
Sbjct: 547 IDSV 550
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G V I V D ND PIF ++ YS+ I E
Sbjct: 1704 GLLDRE-KEERVSLKVL-AKNFGSIRGADVDEVTVNITVLDANDP-PIFSLTVYSVQISE 1760
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE-------PNGLFS 154
VP+GT V VSA D+D S SW+ NG FS
Sbjct: 1761 GVPMGTHVTFVSAFDSD----SVPSWSRFSYFIGSGNENGAFS 1799
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 73 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 122
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 1200 STDVTIFVTDVNDNAPRFSRPSYYLDCPELSEIGSKVTQVSATDPDEGSNGQVFY 1254
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L K KG NP PL I+V ++N + P F + + ++PE +G +V+
Sbjct: 1398 QNFLITVTAKDKG-NP-PLSSQATVQIVVTEENYHTPEFSQTHVTAALPESHSIGAMVRT 1455
Query: 129 VSASDADLGVNSKLSWN 145
VSA D D +N + ++
Sbjct: 1456 VSARDRDAAMNGVIRYS 1472
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 80 KGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADL 136
K S+ G + + +I+ D+NDN P F SQ +S +PE+ P+G V V+ SD D+
Sbjct: 1089 KSSDKGSPSQSTSVKVIINILDENDNAPKF--SQIFSAHVPENSPLGYTVTRVTTSDEDV 1146
Query: 137 GVNS 140
GVN+
Sbjct: 1147 GVNA 1150
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI + D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 1299 TSSDRGNPS-LLSETTVTINIVDSNDNAPQFLKMKYFTPVTKNVKVGTKLIKVTAVDDKD 1357
Query: 136 LGVNSKLSW 144
G+NS++ +
Sbjct: 1358 FGLNSEVEY 1366
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 35/143 (24%)
Query: 6 IGKGYEYNHWSISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRAL 65
I G E NH++I KL S +L L+ A F F + RA
Sbjct: 2582 ITSGNELNHFAIDKLDGSIFL-LKELDFDRAGEFKFIV-------------------RAT 2621
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+ + L LVG TI V+D+NDN P+FPV++Y+ SIPE P+GTV
Sbjct: 2622 DTKNYVL------------ASLVGV---TIKVKDENDNPPVFPVTRYNESIPEASPIGTV 2666
Query: 126 VQVVSASDADLGVNSKLSWNELE 148
+ A+D D G L++ LE
Sbjct: 2667 IFTARANDRDRGHFGTLNYTILE 2689
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+ KGS L T T+ V D NDN P+F S Y++++PED +G V V+ASD D G
Sbjct: 530 RDKGS--PSLSSTAKLTVTVSDVNDNEPLFDQSYYNVTVPEDARIGACVLKVAASDPDCG 587
Query: 138 VNSKLSW 144
VN+ +++
Sbjct: 588 VNAVVNF 594
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P +G C I V DQNDN+P F S+YS + ED +GT V +V+A D D N +++++
Sbjct: 1796 PKIGRCRLWITVMDQNDNDPQFEHSEYSPQVREDAEIGTEVLMVNAHDIDEKNNGEVTYS 1855
Query: 146 ELEP-NGLFSSD 156
+ N LFS D
Sbjct: 1856 LINATNSLFSID 1867
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 16 SISKLLESRYLHLRPKSGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVE 75
+I + E + L + G + AFT I P++ + K L R +R E + L V
Sbjct: 2159 AIDEDGEDQRLFFQIIDGNHDNAFT------IDPPSSGIIKTNTVLDREIR-ENYVLIV- 2210
Query: 76 NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
T +P PL GT I + D NDN P+FP S + + ED VG++V V A+D D
Sbjct: 2211 -TASDEMSP-PLSGTTTVLITIVDINDNQPVFPASD-PVRVREDCKVGSIVTTVEANDVD 2267
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + T L +E + G P PL G I ++D NDN PIF Y +I E
Sbjct: 190 GILDREI-TPNFSLVIE--AYDGGTP-PLKGVLLVNITIQDVNDNQPIFSQGNYVATIAE 245
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
+ VGT V V A+D D G N ++ ++
Sbjct: 246 NATVGTSVLRVLATDTDEGRNGEVRYS 272
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSLS 115
LKR+L E +H L V G+ P N T++VE D NDN P+F Y +S
Sbjct: 924 LKRSLDYELRQQHRLTV--IAEDGATPA---RRNNMTLLVEVQDINDNTPVFEYESYRIS 978
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ E + V T V+A+D+D G N++L++
Sbjct: 979 VEESMEVDTEFLRVTAADSDSGNNARLTY 1007
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
I +F NP T L R R+ ++ + + +G+ P T ++ D+ND
Sbjct: 1119 IDEFSINPMTGEMHTKNRLDREKRS--NYECIVEAQDQGAKPKSSRVTVRVRVL--DKND 1174
Query: 103 NNPIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
N P+F +Q S + D P G+ V + ASDAD G N+++ + ELE G
Sbjct: 1175 NAPLFADNQETSFVLRRDEPAGSEVGQIRASDADEGTNAEVVY-ELEATGF 1224
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
L+V + G+ P + VED NDN P F S+ E+ G+++ ++A
Sbjct: 1361 LQVSASDGSGA-PESRASIVTVNVRVEDTNDNPPRFASDPIVFSVSENTSPGSLLNAITA 1419
Query: 132 SDADLGVNSKLSWNELEPNG 151
D D G+N + ++ +EPNG
Sbjct: 1420 HDEDSGLNGLVRYSIIEPNG 1439
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 48 ANPTTRLYKNVGT--LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
A+ T +Y N G L+ +L R E ++ NP PL + I V D NDN
Sbjct: 1015 ASSTFGIYPNTGYVYLRESLDRETEDSYTIQVEAVDNGNP-PLSASTTVFIAVSDANDNE 1073
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
P F + ++ E+ G V + A D DLG N+ + ++ L
Sbjct: 1074 PQFVRDMFEFAVEENAESGRSVGEIRAIDKDLGDNAAIRYSLL 1116
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + T+ + D NDN P F S+Y +IPE G V + A+D D GVN+ L +
Sbjct: 432 PLKTSKQFTLHISDVNDNAPRFTQSEYFANIPEVAEPGFSVVRIRATDRDEGVNAALRYE 491
Query: 146 -ELEPNGLFSSDLRVEWVINRS-VDQHTN 172
+ + NG F D V +S +D TN
Sbjct: 492 LQNDINGWFKIDPVSGIVTTKSFIDCETN 520
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
G I + D NDN+P F + +S+PE+ + + V V A DAD G N ++S++ E
Sbjct: 849 GHAQVNISILDVNDNSPRFESNFVRMSVPENSSLLSPVYFVHAQDADSGENGRISYSLAE 908
Query: 149 PNGLFSSDLRVEWVI-NRSVD 168
+ F + R +I RS+D
Sbjct: 909 ESENFKVNERSGAIILKRSLD 929
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L +++VED+NDN P VS+ + +PED V TVV + A D D N ++ +N
Sbjct: 1485 LSSKVTVSLLVEDENDNAPEI-VSKPYVQVPEDKQVDTVVTTILAVDKDSRENGRILFN 1542
>gi|291387481|ref|XP_002710171.1| PREDICTED: protocadherin alpha 13 [Oryctolagus cuniculus]
Length = 2126
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P+FP S+ + IPE +P T + ASDAD+GVNS L++ L+PN FS D
Sbjct: 1502 VRDVNDNPPVFPESKKRIIIPELIPPETRFPLDGASDADIGVNSALTY-RLDPNDYFSLD 1560
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P G C + V D NDN P ++ SL I ED PVGTV+ +VS SD D G N ++S
Sbjct: 1708 PRTGHCTLLVEVLDINDNVPEITITSLSLPIREDAPVGTVIALVSVSDRDSGANGQVS 1765
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P+ G C + + D+NDN P V+ + I ED PVGTV+ +VS SD D G N ++S
Sbjct: 323 PMAGHCTILVEILDENDNPPEVVVTSLLVPIREDAPVGTVIALVSVSDRDSGANGQVS 380
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G P L GT + + V D NDN+P F ++ + + E+ GT+V ++A+D D
Sbjct: 208 TATDGGQPA-LSGTVHLLVCVLDVNDNDPEFDQPEFKVRLTENSARGTLVTQLNATDRDE 266
Query: 137 GVNSKLSWN--ELEPNG--LFSSD 156
GVN +++++ ++P+G LFS D
Sbjct: 267 GVNGEVTYSMVSIKPSGRPLFSLD 290
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G PG L G+ + V D NDN P F Y + + E+V T V ++ASD D G N
Sbjct: 975 GGRPG-LTGSVQIQVAVLDVNDNAPAFEEPAYRVVLSENVQNDTSVVHLNASDPDEGPNR 1033
Query: 141 KLSW 144
++S+
Sbjct: 1034 EISY 1037
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D NDN P+F + + I E P+ + + ASDAD+GVN+ L++
Sbjct: 881 VRDVNDNPPVFRQREQKVLISESAPLDSRFPLEGASDADIGVNALLTY 928
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R +EH L + T G P L GT I V D NDN P F Y + + E+
Sbjct: 1578 TLDRE-EMQEHSLLL--TAVDGGKP-ELTGTVQLLIEVLDVNDNAPAFDQLLYKVRLLEN 1633
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEP 149
V GTVV ++A+D D G N + + +P
Sbjct: 1634 VFNGTVVIQLNATDPDDGANGDVVYAFRKP 1663
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS-- 154
V D NDN P+F + L I E P + + A+DAD G N+ L++ L N FS
Sbjct: 118 VRDVNDNPPVFSRQEQRLQISESKPPDSRFPLEGATDADTGENALLTY-RLSQNEYFSLA 176
Query: 155 ------SDLRVEWVINRSVDQ 169
R+ ++ +S+D+
Sbjct: 177 SPTNSKQTKRLSLILKKSLDR 197
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P F ++Y++ + E+ G + VSA DAD N+++S++ +E
Sbjct: 439 VADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSARDADARENARVSYSLVE 490
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P F ++Y++ + E+ G + VSA DAD N+++S++ +E
Sbjct: 1824 VADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSARDADARENARVSYSLVE 1875
>gi|7549750|ref|NP_035930.1| cadherin-20 precursor [Mus musculus]
gi|81917936|sp|Q9Z0M3.1|CAD20_MOUSE RecName: Full=Cadherin-20; AltName: Full=Cadherin-7; Flags:
Precursor
gi|4101751|gb|AAD01278.1| cadherin 7 precursor [Mus musculus]
gi|26329965|dbj|BAC28721.1| unnamed protein product [Mus musculus]
gi|110645860|gb|AAI19608.1| Cadherin 20 [Mus musculus]
gi|111599441|gb|AAI19607.1| Cadherin 20 [Mus musculus]
gi|148707933|gb|EDL39880.1| cadherin 20 [Mus musculus]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +GSNP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGSNPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVTIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYIATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y I E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVAVTIKVLDVNDNAPEFP-RFYEAFICENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|444525567|gb|ELV14093.1| Protocadherin gamma-B7 [Tupaia chinensis]
Length = 810
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T G +P P GT I+V D NDN P+F Y +S+ ED
Sbjct: 201 TLDRESQSTHHLVL---TALDGGDP-PRSGTAQIRILVVDANDNPPVFSQDVYRVSLRED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL----EPNGLFSSDLRVEWVINR 165
P GT V VSA+D D G+N++++++ L + +FS D +I R
Sbjct: 257 APPGTSVLRVSATDQDEGINAEITYSFLGAADKAQHVFSLDSTTGNIITR 306
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + + R YK V T R ++ V T NP PL + + + D NDN P
Sbjct: 394 FKIHSSNRYYKLV-TDASLDREQDSEYNVTITATDRGNP-PLSSSTTVILHIGDVNDNAP 451
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+F Y + + E+ P G + VSASD DLG N +S+ ++LEP L S
Sbjct: 452 VFQQVSYVVHVSENNPPGASIAQVSASDPDLGPNGHVSYSIVASDLEPRALSS 504
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ T+ +ED ND+ P F + +L I E G + SA D D GVNS LS +L PN
Sbjct: 120 DVTVQIEDVNDHAPQFHKGEINLEISESTSPGMRTILESAEDPDTGVNS-LSKYQLSPND 178
Query: 152 LFS 154
FS
Sbjct: 179 YFS 181
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + + VE K +GS L C I V D+NDN P ++ S I E+ P GTV+
Sbjct: 315 ERYTMNVE-AKDRGS----LSTQCKVIIEVLDENDNRPEIVITSLSDYILENSPPGTVIA 369
Query: 128 VVSASDADLGVNS--KLSWNELEPNGLFSSDLRVEWVINRSVDQHTN 172
+ D D G N + S + P + SS+ + V + S+D+ +
Sbjct: 370 LFKTRDRDSGENGVVRCSLSRDVPFKIHSSNRYYKLVTDASLDREQD 416
>gi|443728421|gb|ELU14777.1| hypothetical protein CAPTEDRAFT_226654 [Capitella teleta]
Length = 2555
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S +F PT+ + + R + V NP L G C + + D N
Sbjct: 499 SSERFQIEPTSGILRTADIFDREGQIGVTGFGVTIKAKDQGNPS-LAGFCTVRVKIGDTN 557
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-NELEPNGLFSSDLRVE 160
DN P+F + +YS SI E+ VG V+ V A+D D G N K+ + E +P+G F+
Sbjct: 558 DNPPVFNLPEYSTSIEENSVVGKRVKQVYATDRDAGDNGKVGYFMESDPSGFFAIHRSSG 617
Query: 161 WV 162
WV
Sbjct: 618 WV 619
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
TEE + + K KGS P+ + TI++ D ND+ P F Y ++ E+ G +
Sbjct: 1147 TEEEYNIIVQAKDKGS--PPMSSSAVVTIVITDVNDHPPKFTQPIYKATMSENYKAGASI 1204
Query: 127 QVVSASDADLGVNSKLSW 144
VSA+D D+G++++L++
Sbjct: 1205 TSVSATDKDMGIHARLTY 1222
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 90 TCNTTIIVE--DQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +T+IV+ D NDN P+FP+SQY + I E +GT + V+A+D D N++L+++
Sbjct: 220 TRTSTLIVDLIDMNDNAPMFPLSQYIMHGIAETASIGTDIMQVTATDLDSVTNAQLTYSV 279
Query: 147 LEPN 150
+ N
Sbjct: 280 SDSN 283
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 84 PG-PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
PG P G I V D NDN P F Y+ +PE+ G V+ V+A D D
Sbjct: 832 PGTPNQGEAEVQIRVTDMNDNTPFFADRVYTARVPENSDSGAVIITVTAKDLD 884
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 95 IIVE--DQNDNNPIFP-VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+IVE D N+N P FP S Y+ ++ E VGT V V A D D G N ++++ ++ N
Sbjct: 438 VIVEIKDINNNAPRFPECSSYNPTVLEKEDVGTSVVQVRAVDQDSGANGNITYSIVKSND 497
Query: 152 LFSSDLRVE 160
S ++E
Sbjct: 498 QSSERFQIE 506
>gi|76879788|dbj|BAE45735.1| putative protein product of Nbla04261 [Homo sapiens]
Length = 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 51 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 110
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 111 IGRVKANDQDIGENAQSSYDIIDGDG 136
>gi|354490555|ref|XP_003507422.1| PREDICTED: cadherin-20 [Cricetulus griseus]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADTFDINTD 327
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHINVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 EPGFYFVEVPEDVTIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYIATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y I E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVAVTIKVLDVNDNAPEFP-RFYEAFICENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|301763347|ref|XP_002917094.1| PREDICTED: cadherin-9-like [Ailuropoda melanoleuca]
gi|281337371|gb|EFB12955.1| hypothetical protein PANDA_005264 [Ailuropoda melanoleuca]
Length = 789
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|426229742|ref|XP_004023505.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A5-like [Ovis
aries]
Length = 813
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L GT + ++V D NDN P+F S+Y +S+PE++ VGT + ++A+D D
Sbjct: 213 TALDGGDP-ILSGTTHIHVMVLDANDNAPLFTQSEYRVSVPENIAVGTRLLTLTATDPDE 271
Query: 137 GVNSKLSWN 145
G+N KL+++
Sbjct: 272 GINGKLTYS 280
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 63 RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
RAL EE + T NP PL + + V D NDN PIFP + Y IPE+ P
Sbjct: 408 RALDREEISDYNITVTATDCGNP-PLSTENHIFLKVADINDNPPIFPHTSYYTYIPENNP 466
Query: 122 VGTVVQVVSASDADLGVNSKLSW 144
G + V+A D D G N+++++
Sbjct: 467 RGISIFSVNAHDPDSGNNAQVTY 489
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + +E G G L+ + I V+D NDN P ++ S ++ ED GT++
Sbjct: 311 ESRFYDMEVVAQDG---GALLASAKVLITVQDVNDNAPEVLLTSLSSTVSEDCLPGTIIA 367
Query: 128 VVSASDADLGVNSKL 142
+ S D D G N ++
Sbjct: 368 LFSVHDGDSGENGEI 382
>gi|291394434|ref|XP_002713665.1| PREDICTED: cadherin 20, type 2 [Oryctolagus cuniculus]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 EPGFYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP ++ + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVSVTIKVLDVNDNAPEFPRFHDAV-VCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|114662955|ref|XP_001156236.1| PREDICTED: cadherin-11 isoform 8 [Pan troglodytes]
Length = 693
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|56606025|ref|NP_001008420.1| cadherin-12 precursor [Mus musculus]
gi|81910017|sp|Q5RJH3.1|CAD12_MOUSE RecName: Full=Cadherin-12; Flags: Precursor
gi|55991463|gb|AAH86655.1| Cadherin 12 [Mus musculus]
Length = 794
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDG 313
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 61 LKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
LK+ L E + KVE + H+ + GP T I V D D P+F Y+
Sbjct: 332 LKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFSKPLYT 390
Query: 114 LSIPEDVPVGTVVQVVSASDADLG 137
+ + ED PVGT++ V+A D D+G
Sbjct: 391 MEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|345308127|ref|XP_001507828.2| PREDICTED: cadherin-18-like [Ornithorhynchus anatinus]
Length = 796
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y L +PE VG+ V + A+DAD G N+ + + + +G
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMKYTIINGDG 312
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMAEMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|402903253|ref|XP_003914489.1| PREDICTED: cadherin-20 isoform 1 [Papio anubis]
gi|402903255|ref|XP_003914490.1| PREDICTED: cadherin-20 isoform 2 [Papio anubis]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|395745700|ref|XP_002824639.2| PREDICTED: cadherin-24 [Pongo abelii]
Length = 527
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDLGDNALMAYSILDGEG 303
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 189 VYSVLDGLPFFSVD 202
>gi|355701979|gb|EHH29332.1| Cadherin-20 [Macaca mulatta]
gi|355755069|gb|EHH58936.1| Cadherin-20 [Macaca fascicularis]
gi|387542832|gb|AFJ72043.1| cadherin-20 preproprotein [Macaca mulatta]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
++ F +P T + + R + EH + V T PL+G C T+++ D N
Sbjct: 516 ALPMFNIDPDTGVLTTLQIFDRE-KQREHPITVTATDQAAE---PLIGICQITVVILDVN 571
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DNNP F S Y + ED VGT V+A D D G N+ ++++
Sbjct: 572 DNNPRFENSHYEYFLREDTDVGTSFLRVAAHDDDYGSNASITYS 615
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 72 LKVENTKH-----KGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
L E TKH + N PL I V D NDN P F S Y S+ E VGT
Sbjct: 747 LDYETTKHFLLRIRAQNVAAVPLASFATVYINVTDVNDNVPFFTSSIYEASVTEGADVGT 806
Query: 125 VVQVVSASDADLGVNSKLSWNEL 147
+V VSA+D DLG N +++++ L
Sbjct: 807 MVFQVSATDLDLGQNGEITYSLL 829
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 70 HWLKVENTK-HKGSNPG----PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+ L+V++T + S PG P T + + D NDN P F + Y +++ ED VG+
Sbjct: 862 YLLEVKSTDGSESSRPGKHGQPNSDTAYVRVFISDVNDNKPSFTKNVYEVNVDEDQDVGS 921
Query: 125 VVQVVSASDADLGVNSKLSW 144
V VSA+D D G N+KL +
Sbjct: 922 TVITVSANDEDEGTNAKLRY 941
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 39 FTFSIAKFIANPTTRLY--------KNVGTLKRALRTEE---HW----LKVENTKHKGSN 83
TFSI +P R Y + LK+ L EE W +KVE+
Sbjct: 1261 LTFSIIG--GDPDERFYIENHKEDQRASLRLKKTLDYEEIQERWFNLTIKVEDLDFSS-- 1316
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS-IPEDVPVGTVVQVVSASDADLGVNSKL 142
+ C I VED ND+ P+F LS E++PVGT + V+A+D D +N +
Sbjct: 1317 ----IAFC--LIEVEDCNDHTPVFNSQLVQLSPFYENIPVGTTIITVTATDEDSNLNGAI 1370
Query: 143 SWN---ELEPNGLFSSDLRVEWVINRSVDQHTNK 173
++ + +P G F+ D +++S+D+ +
Sbjct: 1371 EYSIQLDSDPTGQFAVDQDGHVTVSKSLDREATQ 1404
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSK 141
NPG L T +++ D ND P F S Y+ ++PE V V T + VSASD D N++
Sbjct: 235 NPGQLTSTVEVWVVITDVNDCAPEFQQSIYTKDNVPETVMVTTALLQVSASDCDSEENAE 294
Query: 142 LSWNELEPN 150
+ + L P+
Sbjct: 295 ILYYSLSPD 303
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSN-PGPLVGTCNTTIIVEDQN 101
+ FI +P L + L+ +E+ L V T S+ P L T + V+D N
Sbjct: 403 MGNFIIDPQKGLIRLRSNPPPKLQGQEYVLNVTATDDNTSDGPSSLSSTALVVVHVDDVN 462
Query: 102 DNNPIFPVSQY---SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+N PIF Q+ S+ E+ PVGT V V A+DAD G N ++ + + +G
Sbjct: 463 NNKPIFQKCQHYREHASVLENQPVGTFVLRVEATDADEGTNGEVKYGLMHRDG 515
>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
mellifera]
Length = 3599
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTTIIVEDQNDN 103
KF + T + K +G L R E K T H P + I++ D NDN
Sbjct: 1977 KFSLDKETGVLKTIGQLDR-----ETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDN 2031
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P F + YS ++PEDV VGT+V V A+D D+G+N K+ +
Sbjct: 2032 APKFTMQTYSATLPEDVEVGTLVTKVHATDDDIGINRKIRY 2072
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL ++ V D+ND+ P F + Y +S+ E+V GT + + A D DLG N ++ ++
Sbjct: 1702 PLTALAEISLQVLDENDHAPKFESNPYGISVAENVEEGTSILKIIAHDDDLGSNGEVRYS 1761
Query: 146 ELEPNGLFSSDL 157
F SD+
Sbjct: 1762 -------FGSDI 1766
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP+T + +K L E+ K N +N CN + V D+NDN P
Sbjct: 626 FFVNPSTGII----VIKNELDYEK--TKFYNLTIAATNMASAKAHCNVIVHVLDRNDNAP 679
Query: 106 IFPVSQYSLSIPEDVPVGTVV-------QVVSASDADLGVNSKLSWNELE--PNGLFSSD 156
F + YS I E +G++V V+ A DAD +N+ L+++ +E P F D
Sbjct: 680 RFLQAVYSGEISEGATIGSLVLTNTSTPLVIKAEDADSELNALLNYDIVEDLPRKYFHID 739
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++L ++ G P PL I V D NDN PIF Y SI ED +G
Sbjct: 2206 RARDYFLTIQAVD--GGIP-PLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 2262
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D N +S+
Sbjct: 2263 VIQVFANDLDSEENGNVSY 2281
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADLGVNS 140
I V D NDN+P+F +S Y+ + ED P+G TV+Q V +DAD+ N+
Sbjct: 2337 IEVLDANDNSPLFSLSNYTAVVQEDKPLGHTVLQFV-VTDADIEPNA 2382
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LKR+L E H L T + + V D NDN P F Y+ S+ E
Sbjct: 1264 LKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHA 1323
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
G V VVSASD D V+ KL++
Sbjct: 1324 ERGQFVTVVSASDPDY-VDEKLTY 1346
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Query: 39 FTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCN 92
FTFSI F+ N TT L G R L E V + L T
Sbjct: 96 FTFSITSGNPEGYFLINSTTGLITTSG---RKLDRENQAEHVLEVMVRDDGWPSLSSTTR 152
Query: 93 TTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D ND+ P F Y++ IP + V A D D+G N K+ ++
Sbjct: 153 VVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLAKDKDIGDNGKIQYS 205
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V+D NDN P F Y +PE VGT V V A+ D GVN+ + ++
Sbjct: 2129 VQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYS 2177
>gi|296222772|ref|XP_002757299.1| PREDICTED: cadherin-20 [Callithrix jacchus]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D +N + + L P
Sbjct: 512 IQTVSAVDHDDPLNGQHFYYSLAPEA 537
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED P+GT V VVSA+D+D+G+N+
Sbjct: 873 ATDSGGRSDTSTVHINITDANNYAPIFENAPYSASVFEDAPIGTTVLVVSATDSDVGINA 932
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL S D
Sbjct: 933 QITYSLNEESINGLSSPD 950
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L T + I V D NDN P F Y SI ED VGT V VSA+D D+
Sbjct: 980 TAKDGGNPS-LSDTTDVEISVTDVNDNAPAFKNPLYQSSILEDALVGTSVIQVSATDPDI 1038
Query: 137 GVNSKLSW 144
G+N ++ +
Sbjct: 1039 GLNGRIKY 1046
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL T I +ED ND+
Sbjct: 1056 GSFVIDPTSGTIRTNKGLDRESVAIYHLTAI--AVDKGS--PPLSSTVEVQIRLEDVNDS 1111
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1112 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1153
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++S+ +E + N +
Sbjct: 681 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEISYSISERDDNFPLA 740
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 741 VDPRTGWV 748
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 411 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATD--DSFP-PRSGTTTLQVNVLDCNDHSP 466
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 467 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 505
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K R E++ + G P P + + I V+D NDN+P F Y ++
Sbjct: 748 VQTIKPLDREEQNRFAFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPTFNPKYYEANVG 806
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 807 EDQPPGTPVTTVTATDPD 824
>gi|47213035|emb|CAF95304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2845
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+T +HWLKV T G P G N T+IV D NDN P+ +Y +++ E+ P GT
Sbjct: 1969 QTAQHWLKV--TALDGGKPIK-SGNLNITVIVSDINDNPPVCDKQKYVVTVKENAPEGTF 2025
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ V+ASD D G+NS + ++
Sbjct: 2026 LLTVNASDPDEGMNSAIEYS 2045
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGP--LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
T+K L EE +V K ++ G L CN + VED NDN P ++ S SIP
Sbjct: 2068 TVKAGLDYEEK--QVYEIKVLAADKGSVSLSTHCNVVVRVEDVNDNPPEIEITSLSSSIP 2125
Query: 118 EDVPVGTVVQVVSASDADLGVNSKL 142
ED P GTVV ++ +D D GVN ++
Sbjct: 2126 EDAPPGTVVALMGVTDRDSGVNGQV 2150
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 72 LKVENTKHKGSNPGP--LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
LK+ + S+ GP L G C TI V D NDN+P + + + E++ V TV+ VV
Sbjct: 1313 LKLFEMEVIASDKGPNLLSGQCKLTIQVTDMNDNHPEISIKSFQSPVKENIDVETVIAVV 1372
Query: 130 SASDADLGVN 139
S SD D G N
Sbjct: 1373 SVSDKDSGDN 1382
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
H ++ T +P L T + V D NDN P+F S Y+ +PE+ G+ V V
Sbjct: 2185 HMYDIQITAKDLGSPA-LSSTKVIHVDVLDVNDNRPLFSESPYTFYVPENNKAGSSVFTV 2243
Query: 130 SASDADLGVNSKLSWN 145
SASD D G N+ LS++
Sbjct: 2244 SASDVDSGQNAALSYS 2259
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLK----VENTKHKGSNPGPLVGTCNTTIIVEDQN 101
F NP+ V ++KR + EE K V N K NP + I + D N
Sbjct: 1840 FKVNPS----DGVLSVKRRVDREELCAKMAPCVANLKAVVENP---LEMHQVIIEILDVN 1892
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DN P FP Y+L + E VG+ Q+ A D ++G+NS ++
Sbjct: 1893 DNAPKFPEENYTLEVLESAMVGSRFQIEGAHDLEVGINSLQTY 1935
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT + + V D NDN P F +Y + + E+ P+G++V ++A+D D G NS + ++
Sbjct: 1224 GTASIVVRVLDVNDNAPSFDREKYVVDVMENSPIGSLVLKLNATDLDEGSNSDIVYS 1280
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 2317 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 2376
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 2377 EVSDHSLFGLD 2387
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L +
Sbjct: 2604 VFILDQNDNAPVILYPVSSNGSAEGLEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFALQ 2663
Query: 146 ELEPNGLFSSD 156
E+ + LF D
Sbjct: 2664 EVSDHSLFGLD 2674
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 41 FSIAKFIANPTTRLYKNV----GTLKRALRTEEHWLKVENTKH---KGSNPGPLVGTCNT 93
F + K IAN + + ++ G L AL+T ++ ++ E H + S PL
Sbjct: 1493 FILEKEIANTSMSMLFSINPENGNL-YALKTFDYEIEKEFLFHIEARDSGSPPLSSNVTV 1551
Query: 94 TIIVEDQNDNNPIFPV---SQYSL---SIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
I++ DQNDN P+ +Q S+ IP G++V V A D D NS++++ L
Sbjct: 1552 HIVIVDQNDNAPVIVSPWRAQGSVVEEKIPRSTDKGSLVAKVIALDVDSVHNSRITYQLL 1611
Query: 148 EPNG--LFSSD 156
+ LFS D
Sbjct: 1612 QVTDATLFSLD 1622
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
D NDN+P + + + E++ V TV+ VVS SD D G N
Sbjct: 425 DMNDNHPEISIKSFQSPVKENIDVETVIAVVSVSDKDSGDN 465
>gi|410948477|ref|XP_003980965.1| PREDICTED: protocadherin beta-17-like [Felis catus]
Length = 765
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L++ T G +P P GT I+V D NDN P F Y + +PE+
Sbjct: 199 LDKALDREEQSELRLTLTALDGGSP-PRTGTAQVLIVVLDINDNAPEFAQLLYEVQVPEN 257
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG++V V A+D D G +LS++
Sbjct: 258 SPVGSLVITVFATDLDAGTYGELSYS 283
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L EE + L++E S+ G L G C I V D NDN P +S IP
Sbjct: 306 LKKTLDFEEIRSYRLEIE-----ASDGGGLSGKCTIAIEVMDVNDNAPELTMSVLISDIP 360
Query: 118 EDVPVGTVVQVVSASDADLGVNSKL 142
E+ P TVV + SD D G N K+
Sbjct: 361 ENTP-DTVVAIFGISDPDSGENGKM 384
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
N T+ V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 439 NITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGANAQVTYSLLPP 496
>gi|402912983|ref|XP_003919013.1| PREDICTED: cadherin-8-like [Papio anubis]
Length = 579
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 177 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 236
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 237 IGRVKANDQDIGENAQSSYDIIDGDG 262
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + S P L I V+D NDN P F Y
Sbjct: 59 DIHAIKRLDREEKAEYTLTAQAVDWETSKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 116
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 117 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 159
>gi|380811910|gb|AFE77830.1| cadherin-20 preproprotein [Macaca mulatta]
Length = 801
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|326673397|ref|XP_002664337.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 794
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +++ +K+ T G +P L G+ + I V D NDN P+F S Y ++ E+ P T+
Sbjct: 192 REKQNEIKLVLTAVDGGDP-QLSGSIDIHITVLDVNDNAPVFMQSVYKATVTENAPKDTI 250
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVINR 165
V VSA+DAD G+NSK+ ++ D++ + INR
Sbjct: 251 VSTVSATDADEGINSKIEYSIAN----MEDDVQQLFTINR 286
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R + ++V+ + H G L +C + V D NDN P+ + + I E+ P TV
Sbjct: 301 RARNYEIRVQASDH-----GDLTDSCKIIVDVIDVNDNKPVINIMSKTNVIAENSPSETV 355
Query: 126 VQVVSASDADLGVNSKL--SWNELEPNGLFSSD 156
V +++ DAD G N K+ S NE P L S++
Sbjct: 356 VTMINVQDADSGENGKVQCSVNENIPFSLKSTN 388
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPEDVP----VGTVVQVVSAS 132
G +P PL + I+++DQNDN P ++PV + + E VP VG +V V A
Sbjct: 525 QDGGSP-PLSSNASVKILIQDQNDNAPQVLYPVQSGASVVAEIVPRSADVGYLVTKVVAV 583
Query: 133 DADLGVNSKLSW 144
D D G N+ LS+
Sbjct: 584 DVDSGQNAWLSY 595
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ D NDN P+F S Y S+ E+ G + V A DAD N+++S+
Sbjct: 432 ISDVNDNPPVFEQSSYQASVQENNTPGLSIFTVRARDADFNQNARVSY 479
>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
Length = 4335
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 54 LYKNVGTLK--RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
L +N G LK +A+ E W +++ H N L+ + I V+D NDN PIF
Sbjct: 2742 LDQNTGALKVRKAMDYESTKWYQIDLMAHCPYNDTNLISLVSVNIQVKDVNDNRPIFEAD 2801
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNG----LFSSDLRVEWV 162
Y + E++PVGT V V+A+D D G + ++S+ ++P+ LF+ D W+
Sbjct: 2802 PYKAILTENMPVGTAVIQVTANDQDTGKDGQVSYRLPMDPDSNIHELFAIDSETGWI 2858
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF NP + + TLK+ L E +V K + + G VG C II+ D+NDN
Sbjct: 2527 KFSINP----HGQITTLKK-LDRENSTERVIAIKVRAQDRGGKVGFCTVKIILTDENDNA 2581
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F S+Y++SI +V + V V A DAD G N+ ++++
Sbjct: 2582 PQFKASEYTVSIQSNVSKDSPVIQVLAYDADEGRNADVTYS 2622
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V+D NDN P FP Y ++I ED VGT + + A DAD N ++ + L P F
Sbjct: 806 TVHVKDCNDNAPRFPPGGYQITISEDTGVGTTIAELKAKDADSDDNGRVRYTLLSPTEKF 865
Query: 154 S-SDLRVEWVINRSVDQHT 171
S L E V+ +D+ +
Sbjct: 866 SLHPLTGELVVTGHLDRES 884
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVE--NTKHKGSNPGPLVGTCNTTIIVEDQND 102
KF +P T G L R ++ LKVE + KG L + TI +ED ND
Sbjct: 864 KFSLHPLTGELVVTGHLDRE-SEPQYILKVEARDQPRKGHQ---LFSVTDLTITLEDVND 919
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFSSDL 157
N+P SL +PED+P GT++ + A D DLG ++ L + +G F DL
Sbjct: 920 NSPQCVTELSSLKVPEDLPPGTILTFLDAFDPDLGPAGEVQHVLLNDAHGTFHVDL 975
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ VED NDN+P+F Y I + G V+ VSASD DLGVN +++ E F
Sbjct: 2057 VSVEDVNDNHPLFKHLPYYTIIQDGTEPGDVIFQVSASDQDLGVNGAVTYAFSEEYTYFR 2116
Query: 155 SD 156
D
Sbjct: 2117 ID 2118
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
++VED NDN P F Y+ SI E +P T V + ASD D G N +S+ +E
Sbjct: 2259 VLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVE 2312
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
+++L +E ++ S+ G + TTI+V D N++ P FP YS + E+ VG V
Sbjct: 3287 KYFLSIECSRKGSSSLGDM-----TTIVVNITDINEHRPRFPQDLYSTRVLENAIVGDTV 3341
Query: 127 QVVSASDADLGVNSKLSWNELEPNGL 152
VSA+D D +NS ++++ + N L
Sbjct: 3342 LTVSATDEDGPLNSAITYSLVGGNQL 3367
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DQND P+F Y ++I ED+ + + + V+A+DADLG N++ +
Sbjct: 140 DQNDLKPLFSPPSYRVTISEDMALKSPICKVTATDADLGQNAEFYY 185
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T L L R + +EH L+V T P L T + + D NDN P
Sbjct: 1184 FAIHPLTGLLSTARQLDRETK-DEHILEV--TVLDNGEPS-LRSTSRVVVCISDVNDNAP 1239
Query: 106 IFPVSQYSLSIPEDV-PV--GTVVQVVSASDADLGVNSKLSWN 145
+F +++ +PE + PV G V ++V ASD D G+N +++++
Sbjct: 1240 VFSHKLFNVRLPERLSPVTPGPVYRLV-ASDLDEGLNGRVTYS 1281
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F +P T + + L R + V + K ++ G + T+ VED NDN
Sbjct: 3058 EFKLDPHTGVLTTLTALDRERK------DVYSLVAKATDGGGQSCQADVTLQVEDVNDNA 3111
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F S ++++ ++ + T V VV A D D G N+++ ++
Sbjct: 3112 PRFFPSHCAVAVFDNTTIKTPVAVVLARDPDQGANAQVVYS 3152
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 89 GTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
G +TT++++ D N++ P+F Y+ + E++P G+ V V+A+D D G N ++++
Sbjct: 437 GLASTTVLIDIVDCNNHAPVFHRLSYAGTFDENIPPGSSVLTVTATDRDHGENGYVTYSI 496
Query: 147 LEPNGL-FSSD 156
P + FS D
Sbjct: 497 ARPKDVPFSID 507
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S+ F N T + + + TL R +WL V +GS P L I V D N
Sbjct: 1075 SLTAFSINQDTGMIQTLATLDREF-VPCYWLTVLAVD-RGSVP--LSAVTEVYIEVTDVN 1130
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
DN P + S+ ED P+ T V + A D D KL++N
Sbjct: 1131 DNPPRMSRPVFYPSVQEDAPLHTSVLQLDAWDPDSSSKGKLTFN 1174
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK---LSWNELE 148
+ ++++ + NDN P+F + S+ ED PVG V VSA D D N K +S NELE
Sbjct: 548 SVSLMLNNLNDNKPMFEEVNCTGSLREDWPVGRPVTAVSAIDVDELQNLKYEFVSGNELE 607
>gi|66773264|ref|NP_001019345.1| protocadherin 2 gamma 1 precursor [Danio rerio]
gi|51557437|gb|AAU06405.1| protocadherin cluster 2 gamma 1 [Danio rerio]
Length = 948
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ L + T G P P GT + V D NDN P+F + Y +S+PE+ PV TV
Sbjct: 203 REQQKELTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPENSPVDTV 261
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSA+DAD G N ++++
Sbjct: 262 VVTVSATDADEGQNGEVTY 280
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N + V D NDN P+F Y + E+ G+ + VSA+D D N + ++
Sbjct: 432 PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQENNKAGSSICSVSATDPDWRQNGTVVYS 491
Query: 146 EL 147
L
Sbjct: 492 LL 493
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+E ++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2272 ETKERFVLMITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2329
Query: 126 VQVVSASDADLGVNSKLSWNELEPNGLFS 154
V +V+ASDAD N+ +S+ + N F+
Sbjct: 2330 VLLVNASDADASKNAVISYRIIGGNSQFT 2358
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ PG V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V +SA+D D G+N+ L ++ + NGL
Sbjct: 474 VFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGL 520
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1294 PLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYS 1353
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T++++ V GS P PL + + + V D NDN
Sbjct: 2355 SQFTINPSTGQIITSALLDR--ETKDNYTLVVVCSDAGS-PEPLSSSTSVLVTVTDVNDN 2411
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G+ V V+ +DAD+G NS+L ++
Sbjct: 2412 PPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYS 2453
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GS P T +I++ D ND P+F +S YS+++PE++
Sbjct: 2168 KTPTYHLTVQATD-RGSTP--RTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPR 2224
Query: 124 TVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVINRSVDQHTNK 173
T++QVV A D D G NSKLS+ N F+ E + +S+D+ T +
Sbjct: 2225 TILQVV-ARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKE 2275
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3125 GYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3180
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 665 GSPPQSSMARINVSLL--DINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNPIF + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2081 LSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGI 2140
Query: 147 LEPNGLFSSDLRVEWV 162
+ NG + + R++ V
Sbjct: 2141 V--NGNTNQEFRIDSV 2154
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 1978 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2036
Query: 147 LEPNG 151
L P G
Sbjct: 2037 LNPLG 2041
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN+P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 983 TVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGN 1039
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++ K KG NP PL I V ++N + P F S S +IPE +G++V+
Sbjct: 3002 QNFFITVTAKDKG-NP-PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRT 3059
Query: 129 VSASDADLGVNS--KLSWNELEPNGLFS 154
VSA D D +N K S + G+F+
Sbjct: 3060 VSARDRDAAMNGLIKYSISSGNEEGIFA 3087
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND PIF ++ YS+ I E
Sbjct: 3308 GILDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PIFTLNIYSVQISE 3364
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3365 GVPIGTHVTFVSAFDSD 3381
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSWN 145
L+ TI + D NDN P F S+Y + ++V VGT +++V + D D G+NS++ +
Sbjct: 2912 LISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYF 2971
Query: 146 ELEPN--GLFSSDLRVEWV 162
N G F D W+
Sbjct: 2972 ISNDNHLGKFKLDNDTGWI 2990
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F + Y L PE +G+ V V A+D D G N ++ +
Sbjct: 2804 STDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVTQVFATDPDEGSNGQVFY 2858
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQ 127
H++ + KGS P T +I + D+NDN P F SQ +S +PE+ P+G V
Sbjct: 2687 HYVLTIKSSDKGS---PSQSTSVKVMINILDENDNAPRF--SQIFSAHVPENSPLGYTVT 2741
Query: 128 VVSASDADLGVNS 140
V+ SD D+G+N+
Sbjct: 2742 RVTTSDEDIGINA 2754
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIP 117
G L R L ++ V N + P V + + D ND P+F + Y +S+
Sbjct: 538 GGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 118 EDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + ++ A+D DLG N + S E E
Sbjct: 594 ENAPTGTELLMLRATDGDLGDNGTVRFSLQEAE 626
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
>gi|426254115|ref|XP_004020730.1| PREDICTED: cadherin-20 [Ovis aries]
Length = 693
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 221 GVIRTALTNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQ 280
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 281 MSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 327
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 60 TLKRAL---RTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L R + + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFERKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 DPGFYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSVLQGQPYFSVD 217
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ T+ V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTVKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEP 149
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAP 535
>gi|60551183|gb|AAH90908.1| Cadherin 6 [Danio rerio]
Length = 794
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 35 YAPAFTFSIAKFIANPTTRLYKNVGTLKRAL-------RTEEHWLKVENTKHKGSNPGPL 87
Y+ +SI + +P + N G ++ AL EH+ V K G L
Sbjct: 188 YSAKLAYSIKE--GHPYFSVEPNTGIIRTALGPTDMDREQREHYQVVIEAKDMAGQKGGL 245
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+G+ I + D NDN P F Y S+PE VG+ V + A D D+G N+++S++
Sbjct: 246 IGSTTVNISLTDINDNAPHFKQGIYQFSVPELTKVGSSVGRIEAEDVDIGRNAEMSYS 303
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + + D NDN P F Y+ S+PE +GT V V+A DAD G ++KL
Sbjct: 133 PLEPETEFIVKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGYSAKL 192
Query: 143 SWNELEPNGLFS 154
+++ E + FS
Sbjct: 193 AYSIKEGHPYFS 204
>gi|449281267|gb|EMC88387.1| Cadherin-18 [Columba livia]
Length = 790
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFS 154
P FP Y L +PE VG+ V + A+DAD G N+ + + + + +G+FS
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMKYTIINGDGSGVFS 317
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
>gi|440902416|gb|ELR53213.1| Protocadherin gamma-B7, partial [Bos grunniens mutus]
Length = 708
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK+AL E + S P GT ++V D NDN P+F Y +S+ EDV
Sbjct: 119 LKKALDRETQSVHHLVLTALDSGDPPQSGTAQIRVLVVDANDNPPVFSQDVYKVSLREDV 178
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNEL 147
P GT V VSA+D D GVN++++++ L
Sbjct: 179 PPGTFVLRVSATDQDEGVNAEITYSFL 205
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R RT E+ + + T P PL + T+ + D NDN P+F + Y + + E
Sbjct: 331 GALDRE-RTPEYNVTI--TAVDRGKP-PLSSSTAITLRITDVNDNAPVFHQASYVVHVAE 386
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
+ P G + VSA D DLG N ++ + N+LEP L S
Sbjct: 387 NNPPGASIAQVSARDPDLGPNGQVVYSIVANDLEPRALSS 426
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y+NVG + V K +GS L C I V D+NDN+P ++ S
Sbjct: 232 YENVG----------RYAMVVEAKDRGS----LSTRCKVIIEVLDENDNSPEIIITSLSD 277
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I ED P G VV + D D N +++ N
Sbjct: 278 QILEDSPPGMVVALFKTRDQDSKENGEVTCN 308
>gi|426229740|ref|XP_004008944.1| PREDICTED: protocadherin gamma-A2 [Ovis aries]
Length = 804
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L RAL EE H+L ++ G +P GT + V D NDN P+F +Y +S+P
Sbjct: 196 LGRALDREEEAVHYLVLK--ALDGGDP-IRSGTSRIRVTVLDVNDNAPVFTQPEYRVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+ PVGT + V+A+DAD G N+++++
Sbjct: 253 ENTPVGTRILTVTATDADEGYNAQVTY 279
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ T+ V D NDN P F ++ + S+
Sbjct: 302 TITKSLDYEDAKFHEIDIEAQDGPG-----LLTRMKVTVTVLDVNDNVPEFYMTSATSSV 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PED P GT++ + + D D G N+ ++ +
Sbjct: 357 PEDSPPGTIIALFNVHDRDSGQNAFITCS 385
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P F V + L I E G + + SA DAD+G N+ L E+ N FS D
Sbjct: 123 IKDINDNAPRFGVEEVELKISETTTPGFRIPLKSAHDADVGENT-LQKYEINSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSGVDGNKYPELVLGRALDRE 203
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
V D NDN P FP + YS IPE+ P G + V A D D N+ ++++ E
Sbjct: 442 VTDINDNPPTFPHTSYSAYIPENNPRGASIFSVMARDPDSNNNAHVTYSLAE 493
>gi|74203863|dbj|BAE28530.1| unnamed protein product [Mus musculus]
Length = 459
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F PTT + + + R L ++ + + K PG L GT +I + D NDN P
Sbjct: 195 FSVEPTTGVIRISSKMDREL--QDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKP 252
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF S Y +I E P+G + + A D D+G N+++ ++
Sbjct: 253 IFKESFYRFTISESAPIGKSIGKIMAYDDDIGENAEMEYS 292
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 73 KVENTKHKGSNPGPLVGTCNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVV 129
KV+N H P +TT I VED+ D P+F + Y L IPE P GT+V V
Sbjct: 333 KVKNC-HVDEELAPAHVNASTTYIKVQVEDE-DEPPVFLLPYYILEIPEGKPYGTIVGTV 390
Query: 130 SASDAD 135
SA+D D
Sbjct: 391 SATDPD 396
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 63 RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSIPEDVP 121
+ L EE L + + + G V T + +I V D NDN P F Y +PE P
Sbjct: 101 QKLDREEKSLYILRAQVIDTTIGKAVETESEFVIRVLDINDNEPRFLDEPYEAIVPEMSP 160
Query: 122 VGTVVQVVSASDAD---LGVNSKLSWN 145
GT V V+A+DAD G ++++ +N
Sbjct: 161 EGTFVIKVTANDADDPSTGYHARILYN 187
>gi|47207230|emb|CAF92015.1| unnamed protein product [Tetraodon nigroviridis]
Length = 753
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E + + T G P L GT + V D NDN P+F Y ++PE+ +GT+
Sbjct: 186 REREEEISLVLTATDGGQP-VLSGTAQIHVTVLDVNDNAPVFTKPVYKATVPENALIGTL 244
Query: 126 VQVVSASDADLGVNSKLSW 144
+ VSASDAD G+NSK+++
Sbjct: 245 ITKVSASDADKGLNSKITY 263
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L +C T+ V D NDN P+ + S I E+ T+V +V+ D D G N
Sbjct: 304 QASDEGGLTDSCKITVEVADINDNKPVINIMSQSNVISENSKPATIVTMVNVQDLDSGDN 363
Query: 140 SKL 142
K+
Sbjct: 364 GKI 366
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 79 HKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPV----SQYSLSIPEDVPVGTVVQVVSAS 132
G +P PL + I+++DQNDN P ++PV S + +P VG +V V A
Sbjct: 519 QDGGSP-PLSSNVSVRILIQDQNDNPPQVLYPVQTGGSMVAEMVPRSADVGYLVTKVVAV 577
Query: 133 DADLGVNSKLSW 144
D D G N+ LS+
Sbjct: 578 DVDSGQNAWLSY 589
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
I PT+ + N+ T R E + + P L + T+ + D NDN P
Sbjct: 376 LILKPTSANFFNLLTKNELDRERESEYNITVSCSDEGVPS-LSSSVTLTLQISDVNDNAP 434
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F S Y I E+ G + V A DAD N+++S+
Sbjct: 435 VFERSSYQAYIVENNTPGLSIFTVRARDADWNQNARVSY 473
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
TI V D NDN P+F S+ I E G + A+DAD+G+N
Sbjct: 104 TIEVADINDNPPLFEKSEMKFKISESATSGAKFLLERAADADVGLN 149
>gi|403267989|ref|XP_003926073.1| PREDICTED: cadherin-20 isoform 1 [Saimiri boliviensis boliviensis]
gi|403267991|ref|XP_003926074.1| PREDICTED: cadherin-20 isoform 2 [Saimiri boliviensis boliviensis]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D +N + + L P
Sbjct: 512 IQTVSAVDQDDPLNGQHFYYSLAPEA 537
>gi|395504766|ref|XP_003756718.1| PREDICTED: protocadherin gamma-A2-like [Sarcophilus harrisii]
Length = 956
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R E+ L + G P L GT + V D NDN P+F S YS+++PE+
Sbjct: 196 LERALDREEQPTLHMVLLARDGGEP-VLSGTVRIRVTVLDVNDNAPVFTQSVYSVNVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
V GTV+ V+A+DAD G NS + +
Sbjct: 255 VSQGTVLLTVNATDADEGSNSHVKY 279
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS---- 154
D NDN P F + L I E +GT + SA D+D+GVNS L EL N FS
Sbjct: 125 DINDNAPRFREEELELKISETTALGTQFILESAYDSDVGVNS-LQRYELSHNDHFSLLVQ 183
Query: 155 -SDLRV---EWVINRSVDQH 170
D R+ E V+ R++D+
Sbjct: 184 NKDDRIKYPELVLERALDRE 203
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN-----PIFPV--SQYSLSIPEDVP 121
E L+V T NP PL + + + DQNDN PIFP S P
Sbjct: 529 EFQLRV--TARDSGNP-PLSSNVSLVLFILDQNDNTPEILYPIFPTDGSTGVELAPRSAE 585
Query: 122 VGTVVQVVSASDADLGVNSKLSWNEL---EPNGLFSSDL 157
G +V V A DAD G N+ LS+ L EP GLFS L
Sbjct: 586 PGYLVTKVVAVDADSGQNAWLSYCLLKTTEP-GLFSVGL 623
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G + V D NDN P V+ S+PE+ P GTV+ + D D G N ++
Sbjct: 329 GRAKIYVTVLDVNDNAPDVTVTSIINSVPENAPPGTVIALFYVHDQDSGENGRV 382
>gi|334311085|ref|XP_001377757.2| PREDICTED: protocadherin gamma-A4-like [Monodelphis domestica]
Length = 822
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++AL EE H L + T G NP + V D NDN P+F QYS+S+P
Sbjct: 196 LEQALDREEVSIHHLTL--TASDGGNPSR-SAIVLILVTVLDANDNAPVFTQFQYSVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+VPVGT + V+A+D D G+N +S+
Sbjct: 253 ENVPVGTCLLRVNATDPDEGMNGDVSY 279
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP PL + ++ +ED NDN P F + YS I E+ P GT + ++A D+D+G N +
Sbjct: 429 NP-PLSTDTHISLHIEDINDNPPAFIQTVYSAYIMENNPRGTSIYSLTAHDSDIGENGHV 487
Query: 143 SWNELE 148
S++ E
Sbjct: 488 SYSIAE 493
>gi|297275401|ref|XP_002800989.1| PREDICTED: cadherin-20-like [Macaca mulatta]
Length = 772
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 425 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 482
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 483 IQTVSAVDQDDPRNGQHFYYSLAPEA 508
>gi|16306537|ref|NP_114097.2| cadherin-20 preproprotein [Homo sapiens]
gi|426386116|ref|XP_004059538.1| PREDICTED: cadherin-20 isoform 1 [Gorilla gorilla gorilla]
gi|426386118|ref|XP_004059539.1| PREDICTED: cadherin-20 isoform 2 [Gorilla gorilla gorilla]
gi|190359622|sp|Q9HBT6.2|CAD20_HUMAN RecName: Full=Cadherin-20; Flags: Precursor
gi|71680352|gb|AAI01049.1| Cadherin 20, type 2 [Homo sapiens]
gi|71681802|gb|AAI01048.1| Cadherin 20, type 2 [Homo sapiens]
gi|71682746|gb|AAI01050.1| Cadherin 20, type 2 [Homo sapiens]
gi|119583512|gb|EAW63108.1| cadherin 20, type 2 [Homo sapiens]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|80751169|ref|NP_001032216.1| protocadherin gamma-A2 precursor [Rattus norvegicus]
gi|50512398|gb|AAT77594.1| protocadherin gamma a2 [Rattus norvegicus]
gi|149017316|gb|EDL76367.1| rCG49295, isoform CRA_c [Rattus norvegicus]
Length = 931
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 61 LKRALRTEE----HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
L+RAL EE H + V + + K TC + V D NDN P+F +Y +S+
Sbjct: 196 LERALDREEEAVHHLVLVASDRGKPVRSS----TCRIRVKVLDVNDNAPVFTQPEYRVSV 251
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
PE++PVGT + V+A+D D G N+++++
Sbjct: 252 PENMPVGTRILTVTATDTDEGYNAQVTY 279
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
T+ ++L E+ H + +E G L+ + V D NDN P F ++ + S+
Sbjct: 302 TITKSLDYEKAKFHEIDIEAQDGPG-----LLTRTKVIVTVLDVNDNAPEFYMTSATASV 356
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSS-DLRVEWVINRSVDQH 170
PED P+GTV+ + + D D G N+ S E+ P L S D V R++D+
Sbjct: 357 PEDAPLGTVIALFNVHDRDSGQNAVVTCSLPEMLPFKLERSVDNYYRLVTTRALDRE 413
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P F V + L I E G + + SA DAD+G N+ L +L N FS D
Sbjct: 123 VIDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDADVGENT-LQKYKLNSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRTGADGNKYPELVLERALDRE 203
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y+ V T RAL E+ + K L + + V D NDN P F YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLRAKDQGSPSLSTDAHLLLQVADINDNPPSFSRGAYSA 459
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
IPE+ P GT + V A D D N+ ++++ E
Sbjct: 460 YIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAE 493
>gi|114673370|ref|XP_001143705.1| PREDICTED: cadherin-20 isoform 1 [Pan troglodytes]
gi|114673372|ref|XP_512160.2| PREDICTED: cadherin-20 isoform 2 [Pan troglodytes]
gi|397514041|ref|XP_003827311.1| PREDICTED: cadherin-20 isoform 1 [Pan paniscus]
gi|397514043|ref|XP_003827312.1| PREDICTED: cadherin-20 isoform 2 [Pan paniscus]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTE---EHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFETKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 EPGFYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|158261403|dbj|BAF82879.1| unnamed protein product [Homo sapiens]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|109506501|ref|XP_001056235.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|109507211|ref|XP_001065549.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|149017309|gb|EDL76360.1| rCG49585 [Rattus norvegicus]
Length = 795
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
R Y + K R E+ ++ T G +P P GT IIV D NDN P F + Y
Sbjct: 187 RKYPELVLDKELDREEQAEFRLTLTALDGGSP-PRTGTSQIRIIVLDVNDNAPEFAQAFY 245
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I E+ P+G++V VSA D+D+G N ++S++
Sbjct: 246 RVQILENSPLGSLVAKVSAKDSDIGTNGEVSYS 278
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y++ + E+ + +SA+D+D G N+ ++++ L P+
Sbjct: 436 TVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSGSNAHITYSLLPPH 492
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L G C+ +I V D NDN P +S + IPE+ P T V + D D G N
Sbjct: 318 EASDGGGLSGKCSVSIQVVDVNDNYPELIMSSLTNPIPENSP-ETEVALFRVRDRDSGEN 376
Query: 140 SK 141
K
Sbjct: 377 GK 378
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ V G P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2324 ETKEHFVLVITATDSGF-PA-LTGTGTVNVIVDDVNDNVPTFASKMYFTTIPEDAPTGTD 2381
Query: 126 VQVVSASDADLGVNSKLS 143
V +V+ASDAD N+ +S
Sbjct: 2382 VLLVNASDADASTNAVIS 2399
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + + G T + D NDN P
Sbjct: 1888 FFLNPVTGVFN----LTRVLDYEAQQYYILSVRAE--DGGGQFTTIRVYFNILDVNDNPP 1941
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E++PVG+ V + + +DAD G+NS+L+++
Sbjct: 1942 IFSLNSYSTSLMENLPVGSTVLLFNVTDADDGINSQLAYS 1981
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIHY 287
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG---TCNTTIIVEDQNDNNPI 106
P L K L R R + L V + + G+ P + + I V D ND+ P+
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNHGAPPAEVQARSSVASLVIFVNDINDHPPV 473
Query: 107 FPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 FAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIISGNGL 519
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1078 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1137
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1373 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1432
Query: 121 PVGTVVQVVSASDADLGVNSKLSW 144
P+GT V V+A D D +N +LS+
Sbjct: 1433 PIGTSVISVTAHDPDADINGQLSY 1456
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I + D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1828 ITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDQDGI 1887
Query: 153 F 153
F
Sbjct: 1888 F 1888
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F + T + V L R +T + L V+ +GS P T +I++ D ND
Sbjct: 2200 EFRMDSVTGVITVVKPLDRE-KTATYLLTVQ-AADRGSTP--RTDTSTVSIVLLDMNDFV 2255
Query: 105 PIFPVSQYSLSIPEDVPV--GTVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-D 156
P F +S Y +++PE++ T++QVV A D D G NSKLS+ NE + L +S +
Sbjct: 2256 PTFELSPYLVNVPENLGTLPKTILQVV-ARDDDQGSNSKLSYVLRGGNEDQAFTLSASGE 2314
Query: 157 LRVEWVINRSVDQH 170
LRV ++R +H
Sbjct: 2315 LRVTQSLDRETKEH 2328
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ TI V D NDN+P+F +Y ++ E+ P GT V ++A+D D G N+ +++
Sbjct: 3175 GYCSVTITVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIHLNATDNDSGTNAVIAY 3230
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1294 LNSTCTLNIDILDENDNTPCFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1352
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G+ P V N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 664 GTPPQSSVAQINVSLL--DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPDLGPNG 721
Query: 141 KLSWN 145
+ ++
Sbjct: 722 TVKYS 726
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNP+F + Y + I ED GT + V A+D D G N ++ +
Sbjct: 2133 LSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLTGTDILQVFAADGDEGTNGQVRYGI 2192
Query: 147 LEPNGLFSSDLRVEWV 162
++ G + + R++ V
Sbjct: 2193 VD--GSTNQEFRMDSV 2206
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV ASD D G NS + +
Sbjct: 2030 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQASDPDSGPNSYIEYTL 2088
Query: 147 LEPNG 151
L P G
Sbjct: 2089 LNPLG 2093
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1727 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1776
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L + KG NP PL I V ++N + P F S S +IPE +G +V+
Sbjct: 3052 QNFLITVTAQDKG-NP-PLSSQATVQITVTEENYHTPEFSQSHMSTTIPESHSIGAIVRT 3109
Query: 129 VSASDADLGVNSKLSW 144
VSA D D +N +++
Sbjct: 3110 VSARDRDAAMNGLITY 3125
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQ 127
H++ + KGS P T II + D+NDN P F SQ +S +PE+ P+G +V
Sbjct: 2737 HYMLTVKSSDKGS---PSQSTSVKVIINILDENDNAPRF--SQIFSAHVPENSPLGYIVT 2791
Query: 128 VVSASDADLGVNS 140
V+ SD D+G N+
Sbjct: 2792 RVTTSDEDIGTNA 2804
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1513 NVTILVTDLNDNVPMF-ISQNALAADPSSVIGSVLTTIMAADPDEGANGEVEYEIVNGDM 1571
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1572 DTFIVDRYSGDLRV 1585
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIP 117
G L R L +E V N + P V + + D ND P+F + Y +S+
Sbjct: 537 GGLNRELASE----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYKVSVV 592
Query: 118 EDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 ENAPTGTELLVLGATDGDLGDNGTVRFSLQEAE 625
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
T+ V D NDN P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 982 TLYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDEDSGANGEIAYTIAEGNA 1039
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI + D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2953 TSSDRGNPS-LLSETTVTINIVDSNDNAPQFLRDKYFTPVTKNVKVGTKLIKVTAVDDKD 3011
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS+L + N G F D W+
Sbjct: 3012 FGLNSELEYFISNENYLGKFKLDNDTGWI 3040
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F Y L PE +G+ V V A+D D G N ++ +
Sbjct: 2854 STDVTIFVTDINDNAPRFSRPSYYLDCPELTDIGSKVTQVYATDPDEGSNGQIFY 2908
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ Y++ I E
Sbjct: 3358 GLLDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFSLNIYNVQISE 3414
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3415 GVPIGTHVTFVSAFDSD 3431
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP +++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPTITVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L+G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LLGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F YS + E+V +G V VSAS DL N + G+F
Sbjct: 779 TITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLHSNISYLITTGDQKGMF 838
Query: 154 S-----SDLRVEWVINR 165
+ L VI+R
Sbjct: 839 AINQVTGQLTTASVIDR 855
>gi|126304598|ref|XP_001364096.1| PREDICTED: cadherin-8 [Monodelphis domestica]
Length = 799
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENARSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|10834607|gb|AAG23739.1|AF217289_1 cadherin 20 [Homo sapiens]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|344272222|ref|XP_003407934.1| PREDICTED: cadherin-9 [Loxodonta africana]
Length = 789
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQRTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
PE VP+GT + + ASD D+G N+++ ++ E +G
Sbjct: 275 FKSPESVPLGTHLGRIKASDPDVGENAEMEYSLAEGDG 312
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|332230318|ref|XP_003264336.1| PREDICTED: cadherin-20 isoform 1 [Nomascus leucogenys]
gi|332230320|ref|XP_003264337.1| PREDICTED: cadherin-20 isoform 2 [Nomascus leucogenys]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 60 TLKRALRTEE---HWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIF 107
T+K+ L E + LKVE G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESKKSYTLKVE-----GANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVF 389
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
YS+ +PEDV +GT +Q++SA D D+ NS
Sbjct: 390 EPGFYSVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|440902400|gb|ELR53197.1| Protocadherin alpha-4, partial [Bos grunniens mutus]
Length = 1081
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
NP P+ G C I V D NDN P V+ LSIPED P+GTV+ ++S +D D+G N+++
Sbjct: 314 NP-PMFGHCTVLIEVLDINDNAPELLVTSLLLSIPEDAPLGTVITLISVTDRDVGSNAQV 372
Query: 143 SWN 145
+ +
Sbjct: 373 TCS 375
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 41 FSIAKFI-ANPTTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
FS+ I + PT +L TLK++L R + + T G P L GT + V
Sbjct: 759 FSLELLINSKPTKKLSL---TLKKSLDREKTPEFNLLLTAVDGGKP-ELTGTVELFVRVL 814
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNG--LFS 154
D NDN+P F S+Y + + E+ T+V ++A+D D GVN +++++ ++P G LF+
Sbjct: 815 DINDNDPEFEQSEYKVRLMENAAKETLVIQLNATDQDEGVNGEVTYSLMSIKPKGKPLFT 874
Query: 155 SDL-RVEWVINRSVDQHTNK 173
D E +N ++D NK
Sbjct: 875 LDENNGEVKVNGTLDYEENK 894
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + ++E NP P+ G C + + D NDN+P V+ SL + ED TV+
Sbjct: 892 ENKFYEIEVQATDKGNP-PMAGHCTVWVEILDANDNSPEITVTSLSLPVREDTQPSTVIA 950
Query: 128 VVSASDADLGVNSKL 142
++S D D G N ++
Sbjct: 951 LISVFDRDSGDNGQV 965
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V+D NDN P+FP + +L I E + + + ASDAD+G N+ L++ L PN FS
Sbjct: 110 VKDINDNPPVFPATHRNLFISEARALESHFSLEGASDADIGENTLLTYR-LTPNEYFS 166
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
K +GS L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 414 AKDRGSPS--LSTTASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSARDADA 471
Query: 137 GVNSKLSWNELE 148
N+ + ++ +E
Sbjct: 472 QENALVYYSLVE 483
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L GT I V D NDN P+F + + + + E+ GT++ ++ASD D G N + ++
Sbjct: 209 LTGTVKINITVLDANDNAPVFDKAVHRIKLLENARNGTLIIRLNASDLDEGSNGHILYS 267
>gi|391335873|ref|XP_003742311.1| PREDICTED: cadherin-23-like [Metaseiulus occidentalis]
Length = 1904
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R W+ V K S PL G + +I V D+NDNNP+F I ED P+ TV
Sbjct: 996 RETTSWINV-TLKATDSGFPPLTGMTSLSIQVLDENDNNPVFAEGSTEFHISEDSPIATV 1054
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
V ++A+DAD G + ++++ L+P+G
Sbjct: 1055 VAQLTATDADAGEHGRITY-ALDPSG 1079
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
PL + V+D NDN PIF + Y +IPED+ G+ + V A+DAD
Sbjct: 676 PLSTNTTVKVFVQDANDNAPIFKQNFYRQAIPEDIREGSSIIRVEATDAD 725
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTL--KRALRTEEHWLKVENTKHKGSNPGPL-VGTCNTT 94
A T S+ K + VG L +R E L ++ + GP T
Sbjct: 180 AETLSVFKLQQQGSQARISLVGALDYERKFVYELRVLAIDRARQ-----GPRHTATAVVI 234
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GL 152
I VED D P+F + EDVPVG+ V V A D D G+N+ + + N GL
Sbjct: 235 IKVEDLEDQPPVFTQVPAITRVAEDVPVGSSVLTVKAQDGDRGINNAIKYRIKSGNLQGL 294
Query: 153 FS 154
FS
Sbjct: 295 FS 296
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF--PVSQYSLS 115
VG LR + ++N K + + V D ND+ P+F P Y++
Sbjct: 1222 VGNYSLTLRARDQGFPIQNAMEKFN------------VCVFDVNDHAPVFIKPPQNYTIR 1269
Query: 116 IPEDVPVGTVVQVVSASDADLGVNSKLSW 144
IPE+ +GTVV A D D G N+ + +
Sbjct: 1270 IPENATIGTVVVEALADDEDHGANAAVKY 1298
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P + T+ V D NDN P F Y + ED VGTV+ V A D D
Sbjct: 454 PKTSSAEITVYVRDANDNFPQFMEETYRARVREDAQVGTVIAKVQAVDRD 503
>gi|62643091|ref|XP_229369.3| PREDICTED: cadherin-12-like [Rattus norvegicus]
gi|109466218|ref|XP_001062023.1| PREDICTED: cadherin-12-like [Rattus norvegicus]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDG 313
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 61 LKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
LK+ L E + KVE + H+ + GP T I V D D P+F Y+
Sbjct: 332 LKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFSKPLYT 390
Query: 114 LSIPEDVPVGTVVQVVSASDADLG 137
+ + ED PVGT++ V+A D D+G
Sbjct: 391 MEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|16306532|ref|NP_001788.2| cadherin-11 preproprotein [Homo sapiens]
gi|146345381|sp|P55287.2|CAD11_HUMAN RecName: Full=Cadherin-11; AltName: Full=OSF-4; AltName:
Full=Osteoblast cadherin; Short=OB-cadherin; Flags:
Precursor
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|402872838|ref|XP_003900306.1| PREDICTED: protocadherin gamma-B2 [Papio anubis]
Length = 824
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 199 PDGRKYPEL-ILKHSLDREEHSFHQLVLTAVDGGDP-PQSGTTQIRIQVTDANDNPPVFS 256
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 257 QDVYRVTLREDVPPGFFVLQVTATDQDEGINAEITYS 293
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 403 AKFILKSSSKNYYKLITDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 461
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P+F + Y + + E+ P G + +SASD DLG N ++S+ ++LEP + S
Sbjct: 462 APLFQQTCYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASDLEPREILS 516
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P GTV+ ++ D D G N
Sbjct: 333 EAKDPGDLAAHCSIQVEILDENDCAPEVIVTSVFTPLPEDSPPGTVIALIKTRDRDSGEN 392
Query: 140 SKL 142
++
Sbjct: 393 GEV 395
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F S+ L I E GT + A D+D+G NS
Sbjct: 133 AVIVQDINDNTPLFKQSKIHLKIGESTKPGTTFPLDPALDSDVGPNS 179
>gi|402872824|ref|XP_003900299.1| PREDICTED: protocadherin gamma-A2 [Papio anubis]
Length = 823
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G +P L GT + V D NDN P+F +Y +S+PE+
Sbjct: 196 LERALDREEEAVHHLVLVASDGGDP-VLSGTSRICVKVLDVNDNAPVFTQPEYRISVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PV T + V+A+DAD G N+++++
Sbjct: 255 TPVDTRILTVTATDADEGYNAQVAY 279
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 55 YKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
Y+ V T RAL E+ + + T G NP L + + V D NDN P F + YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLTAKDGGNPS-LSTDAHVLLQVADINDNAPAFSRTSYS 458
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
IPE+ P G V V+A D D N+ L+++ E
Sbjct: 459 AYIPENNPRGASVFSVTAHDPDSNDNAHLTYSFAE 493
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG L T I V D NDN P F ++ + S+ ED P GTV+ + + D D G N+ ++
Sbjct: 325 PGLLTRT-KVIITVLDVNDNAPEFYITSATSSVSEDSPPGTVIGLFNVHDRDSGQNAFIT 383
Query: 144 WN 145
+
Sbjct: 384 CS 385
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + +A DAD+G N+ L L N FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENA-LQKYALNLNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSGVDGNKYPELVLERALDRE 203
>gi|158255938|dbj|BAF83940.1| unnamed protein product [Homo sapiens]
gi|168277858|dbj|BAG10907.1| cadherin-11 precursor [synthetic construct]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|62089106|dbj|BAD92997.1| cadherin 11, type 2 isoform 1 preproprotein variant [Homo sapiens]
Length = 798
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 206 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 265
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 266 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 325
Query: 163 INRSV 167
V
Sbjct: 326 TQEGV 330
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 140 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 199
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 200 VYSILEGQPYFS 211
>gi|410909492|ref|XP_003968224.1| PREDICTED: cadherin-18-like [Takifugu rubripes]
Length = 808
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 209 FSVDPKTGIIRTALADMDREAR--EHYTVVIQAKDMAGQVGGLSGSTTINITLTDINDNP 266
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y L +PE VG V + A+D DLG+N+ + ++ + G
Sbjct: 267 PKFPQKNYQLYVPESAQVGKPVGKIKANDDDLGINADIKYSIINSEG 313
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I V+D NDN P FP + ++PE VGT V V+ASDAD G ++++ ++ L+
Sbjct: 148 IKVQDINDNAPKFPDGPFVATVPEMSEVGTSVLQVTASDADDPTYGNSARIVYSILQGQP 207
Query: 152 LFSSD 156
FS D
Sbjct: 208 YFSVD 212
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
A + + F N TT + L R + + + L + T G NP L ++V
Sbjct: 768 ALSVECSDFTVNATTGCIRLNKQLDRE-KQDNYALHI--TAKDGGNP-VLSSEALVYVLV 823
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLFS 154
+D NDN P+F V +Y + ED+P GTV+ V+ A D D+G N+++ ++ E + LF
Sbjct: 824 DDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQDKELFR 883
Query: 155 SD 156
D
Sbjct: 884 ID 885
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN PIF ++QY +S PED + T++ V A D D GVN ++ ++ + N +
Sbjct: 2918 ITVNDINDNTPIFSMAQYRVSAPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 2977
Query: 155 SDLRVEWVI--NRSVDQHT 171
+ +I ++S+D+ T
Sbjct: 2978 KISKSTGIIRLDKSLDRET 2996
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 66 RTEEHWLKVENTKH-KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+TEE+ ++V+ H N N I V D+ND +P+F +QY++ IPED P
Sbjct: 138 KTEEYVIRVKAHVHLHDRNISSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQ 197
Query: 125 VVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ V+A DADLG+N ++ ++ L + F+
Sbjct: 198 SILKVTADDADLGINGEIYYSLLIDSEYFA 227
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG-PLVGTCNTTII-VEDQNDNNPIFPVS 110
++ K+ G ++ + + + N K + G P + + T + + D NDN P F +
Sbjct: 2978 KISKSTGIIRLDKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMR 3037
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRV-EWVINRSV 167
QYS I E+ GT V V A+ D+GVN+ + + + N G F D + V+N ++
Sbjct: 3038 QYSCEILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATL 3097
Query: 168 DQHTNK 173
D +K
Sbjct: 3098 DYEMSK 3103
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I + D NDN P+ + + + E +GTVV + A+DAD G+N+++++
Sbjct: 718 ITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTY 767
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++ + D ND P Y+++IPE+ GT + ++A+D D G N+KLS+ NG
Sbjct: 2180 SVSIMDVNDCYPEIESDIYNITIPENSSFGTQILKINATDKDSGANAKLSYYIESINGQN 2239
Query: 154 SSDL 157
+S+L
Sbjct: 2240 NSEL 2243
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130
+++ ++ + G N + I V D NDN P+F Y ++ D P GT++ V
Sbjct: 1956 FVEAKSVLYDGMNSNVRRAVTSIYISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVK 2015
Query: 131 ASDADLGVNSKLSWNELEPNG-LFSSDLRV-EWVINRSVDQH 170
A D D N ++ + + NG LF D + E I + V+ H
Sbjct: 2016 AVDLDSAENGEVRYELKKGNGELFKLDRKTGELSIKQHVEGH 2057
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P PL I + D NDN+P F + Y +++ ED+ VG+ + + A+D D +N
Sbjct: 3114 GGTP-PLSNNAYVNISILDINDNSPKFLQNLYRVNVNEDIFVGSKILDIKATDEDSDING 3172
Query: 141 KLSWNELEPN--GLFSSDLRVEWV-INRSVDQHT 171
+++N + + G FS D + + ++R +D+ T
Sbjct: 3173 LVTYNIEKGDNIGQFSIDPKNGTISVSRPLDRET 3206
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I V+D NDN+PIF +SI E+ G+ V ++A D D G NS +S+
Sbjct: 492 ISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISY 541
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 94 TIIVEDQNDNNPIFP---------------VSQYSLSIPEDVPVGTVVQVVSASDADLGV 138
+I+V+D NDN P F + LSI E V +G V + A D DLG
Sbjct: 597 SIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFELSINESVQLGETVAWIEAKDRDLGY 656
Query: 139 NSKLSWNELEPNGLFSSDLRVE 160
N KL + L+ G + S R++
Sbjct: 657 NGKLVFAILD--GDYDSVFRID 676
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVS 130
+KV N KG+N N I + D NDN P F ++Y ++ E +G+ V++V
Sbjct: 1633 IKVFNLTVKGTNMAAESSCQNIIIHILDANDNIPYFVQNEYVGALSESASIGSYVLKVYD 1692
Query: 131 AS---------DADLGVNSKLSWNELE 148
+S DAD+GVN + ++ ++
Sbjct: 1693 SSKDHLTLQVKDADVGVNGMVEYHIID 1719
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 58 VGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYS 113
+ T +R L E EH L+V + N P++ + + ++ V D NDN+P F Y
Sbjct: 1103 IKTTERKLDRENQAEHILEVAIS----DNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYK 1158
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ +P V + V A D+D G N ++++
Sbjct: 1159 VQVPSSATVNQSIFQVHAIDSDSGENGRITY 1189
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 91 CNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
CN+ I + D NDN PIF + YS+ + E+ P+G V +DAD
Sbjct: 3225 CNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYVFLTFKITDAD 3272
>gi|149017317|gb|EDL76368.1| rCG49295, isoform CRA_d [Rattus norvegicus]
Length = 869
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 61 LKRALRTEE----HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
L+RAL EE H + V + + K TC + V D NDN P+F +Y +S+
Sbjct: 196 LERALDREEEAVHHLVLVASDRGKPVRSS----TCRIRVKVLDVNDNAPVFTQPEYRVSV 251
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSW 144
PE++PVGT + V+A+D D G N+++++
Sbjct: 252 PENMPVGTRILTVTATDTDEGYNAQVTY 279
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG L T + V D NDN P F ++ + S+PED P+GTV+ + + D D G N+ ++
Sbjct: 325 PGLLTRT-KVIVTVLDVNDNAPEFYMTSATASVPEDAPLGTVIALFNVHDRDSGQNAVVT 383
Query: 144 WN--ELEPNGLFSS-DLRVEWVINRSVDQH 170
+ E+ P L S D V R++D+
Sbjct: 384 CSLPEMLPFKLERSVDNYYRLVTTRALDRE 413
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P F V + L I E G + + SA DAD+G N+ L +L N FS D
Sbjct: 123 VIDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDADVGENT-LQKYKLNSNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRTGADGNKYPELVLERALDRE 203
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 55 YKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
Y+ V T RAL E+ + K L + + V D NDN P F YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLRAKDQGSPSLSTDAHLLLQVADINDNPPSFSRGAYSA 459
Query: 115 SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
IPE+ P GT + V A D D N+ ++++ E
Sbjct: 460 YIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAE 493
>gi|348514383|ref|XP_003444720.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 1598
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + T G +P + GT I V D NDN P+F S Y+ ++ E+ P GTV
Sbjct: 1185 REKEESISLVLTAFDGGDP-QMSGTIRIFITVLDANDNAPVFTQSTYTATVFENAPEGTV 1243
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSASDAD G N ++ ++
Sbjct: 1244 VTSVSASDADHGSNGRIKYS 1263
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ +L + T G P + GT + V D NDN P F Y + E+ P GT
Sbjct: 697 REKKDYLSLLLTAMDGGEP-QMSGTMQIFVTVLDANDNAPTFAKPLYRAKLQENSPKGTS 755
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSASD D+G N +LS+
Sbjct: 756 VTTVSASDKDIGSNGELSY 774
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R + L + T G P L GT I V D NDN P+F Y ++I E+ G +
Sbjct: 197 REAQQHLSLILTAVDGGEP-QLSGTVRIEISVLDANDNAPVFTQEVYKVTIMENAAKGAI 255
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ VSA+DAD G K+ ++
Sbjct: 256 LCTVSATDADEGSYGKVIYS 275
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ + D NDN P F + I E +G + A D D+GVN S++ L+P F
Sbjct: 115 TVEINDINDNAPSFKKDEIKFRISESAVIGAKFVLERAMDPDVGVNGLQSYS-LQPTDSF 173
Query: 154 SSDL--------RVEWVINRSVDQHTNK 173
+ L +VE V+ + +D+ +
Sbjct: 174 NLKLQNQQDGSKKVEMVLQKHLDREAQQ 201
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L + T+ + D NDN P+F S Y I E+ G + V A+DAD N+++S+
Sbjct: 427 LSSSVTLTLQISDVNDNEPVFERSSYEAYIVENNTPGLSIFTVKATDADWNQNARVSY 484
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L + T+ + D NDN P+F S Y I E+ G + V A+DAD N+++S+
Sbjct: 1415 LSSSVTLTLQISDVNDNAPVFERSSYEAYIVENNTPGLSIFTVKATDADWNQNARVSY 1472
>gi|301621400|ref|XP_002940043.1| PREDICTED: hypothetical protein LOC100490327 [Xenopus (Silurana)
tropicalis]
Length = 4900
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
LK +L R E++ ++ T G NP GT I V D NDN P+F Y +SI E+
Sbjct: 2657 LKTSLDRENENFYEIVLTAFDGGNPMQ-TGTALIRITVTDANDNFPMFSQEIYKVSINEN 2715
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+P+ + V VSASD D G+NS+L+++
Sbjct: 2716 MPLNSTVLYVSASDKDEGINSQLTYS 2741
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E ++ T G +P GT I V D NDN PIF Y++SI E++P+ +
Sbjct: 4298 RETESIHEIVLTAFDGGSPMQ-TGTALIRITVTDMNDNFPIFGQEVYTVSINENIPLNST 4356
Query: 126 VQVVSASDADLGVNSKLSWN 145
V VSA+D D G+NS+++++
Sbjct: 4357 VLCVSANDKDQGINSQITYS 4376
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP GT IIV D NDN PIF Y++S+ E++PV + + VSA+D D
Sbjct: 1033 TAFDGGNPVQ-TGTAIIKIIVSDFNDNAPIFTQEVYTVSLNENIPVNSTILRVSANDKDE 1091
Query: 137 GVNSKLSW 144
G NS++++
Sbjct: 1092 GSNSQITY 1099
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++AL R +E+ L + T G NP GT +++ D NDN P+F Y ++ E+
Sbjct: 194 LEKALDREKENTLGLILTASDGGNPVK-TGTLLIRVVITDANDNFPVFSKDVYKTTVNEN 252
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
+PV + V V+ASD D G N++++++
Sbjct: 253 MPVNSTVISVTASDKDEGTNAQITYS 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT I V D NDN P+F Y +SI E++P+ + + VSA+D D G+NS++ +
Sbjct: 1845 GTALIRITVTDFNDNLPVFSQEVYKVSINENIPINSTILYVSANDKDEGINSQIRY 1900
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E ++ T G +P GT + + D NDN PIF Y +SI E++P+ +
Sbjct: 3480 RETESIHEIVLTAFDGGSPMQ-TGTALIRVTITDSNDNFPIFAQEVYKVSIRENMPLNST 3538
Query: 126 VQVVSASDADLGVNSKLSWN 145
+ VSA+D D G+N++++++
Sbjct: 3539 ILHVSANDKDEGINAQITYS 3558
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 58 VGTLKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+ ++ A+ T+E+ L E TK + + G LV I D+NDN P V+
Sbjct: 1915 INSISGAIMTKEN-LDFEKTKLYEISVQAKDGGGLVSHAKVLIQTLDENDNAPEISVTSI 1973
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ I ED P GTVV ++ A D D G N ++
Sbjct: 1974 TTPISEDSPSGTVVALIEAHDVDSGENGEV 2003
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+ + ++T+E+ + E TK+ + + G LV I + D+NDN P V+
Sbjct: 3572 INAISGEIKTKEN-IDFEKTKYYEISVQARDGGGLVSHAKVLIEIIDENDNIPEISVTSV 3630
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSS 155
+ +I ED P G VV ++ A D D G N ++ +L P L S+
Sbjct: 3631 TTAISEDSPSGIVVALIVAHDLDSGENGEMDCQIIDLVPFKLLST 3675
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 65 LRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
++T+E+ L E TK+ + + G LV I + D+NDN P V+ + + ED
Sbjct: 4397 IKTKEN-LDFEKTKNYEISVQAKDGGGLVSHAKVLIQILDENDNAPEISVTSVTTPVSED 4455
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
GTVV ++ A D D G+N ++
Sbjct: 4456 SAPGTVVALIKARDLDSGINGEV 4478
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 58 VGTLKRALRTEEHWLKVENTKH-----KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
+ ++ ++T+E+ L E KH + + G LV I + D+NDN P ++
Sbjct: 1114 IDSISGEVKTKEN-LDFEKIKHYEISVQAKDGGGLVSHAKILIQIIDENDNAPGITITSI 1172
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
+ I ED GTVV ++ A D D G N ++
Sbjct: 1173 NTPISEDSAPGTVVALIKAHDLDSGENGEV 1202
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 54 LYKNV--GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
YK V TL R +++ H+ KGS PL + V D NDN P+F S
Sbjct: 3679 FYKIVTSSTLDREMKS--HYDITIQATDKGS--PPLSSRKTIRLDVSDINDNAPVFEKST 3734
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
Y + I E+ G + + ASD D N+KL ++ + N
Sbjct: 3735 YIVYISENNEPGASIYSIQASDKDSEENAKLVYSSITSN 3773
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ D NDN P+F Y +PE+ G ++ + A D D+G N+K++++ L N FS
Sbjct: 440 ISDVNDNAPLFIKPTYDAFLPENNLPGALIYSLHAKDLDVGDNAKVTYSILNTNTDFS 497
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G LV C + V D+NDN P + IPE GTV+ ++ D D G N
Sbjct: 318 QAKDGGGLVAHCKVLVEVMDENDNEPEINFASLFSPIPEHSIAGTVIALIEVHDQDSGEN 377
Query: 140 SKL 142
++
Sbjct: 378 GEV 380
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 42 SIAKFIA-NPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
S+A +I+ NP T V +R++ E+ K S L T I V DQ
Sbjct: 3778 SLASYISINPVT----GVIYAQRSIDYEQSKEFQIQIMAKDSGYPSLNSTSFVRICVIDQ 3833
Query: 101 NDNNPI--FPVSQYSLSIPEDVPV----GTVVQVVSASDADLGVNSKLSWNELE 148
NDN+PI +P + + E VP GT+V V A DAD G N+ LS++ L+
Sbjct: 3834 NDNSPIILYPSADVGSAAYEMVPFSSEQGTLVTKVVAVDADSGHNAWLSYHFLQ 3887
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 86 PLVGTCNTTIIVEDQNDNNP--IFPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGV 138
PL + TI V DQNDN+P ++P + S +P GT+V V A DAD G
Sbjct: 2162 PLNSSVIVTICVTDQNDNSPLVLYPSADAGGSAAYEMVPFSSEQGTLVTKVVAVDADSGH 2221
Query: 139 NSKLSWNELE 148
N+ LS++ L+
Sbjct: 2222 NAWLSYHFLQ 2231
>gi|297295282|ref|XP_001089657.2| PREDICTED: protocadherin beta-2 isoform 1 [Macaca mulatta]
Length = 798
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P T I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTAVDGGTP-PRSSTALVRIEVMDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+G+ V +VSA D D+G N ++S+
Sbjct: 257 SPIGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
T RL G L + ++ + ++ G L GTC + V D NDN P +S
Sbjct: 293 TFRLSAKSGELLLRQTLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMS 352
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
IPE++ T++ V S SD D G N +
Sbjct: 353 TLINQIPENLQ-DTLIAVFSVSDPDSGDNGR 382
>gi|351696444|gb|EHA99362.1| Protocadherin gamma-A1 [Heterocephalus glaber]
Length = 783
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 51 TTRLYKNVGTLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPV 109
T RL + L+R L R EE + T G NP GT + + V D NDN P F
Sbjct: 159 TNRLQRPEMVLQRLLDREEEAVHHLVLTASDGGNPV-RSGTLHIRVQVVDANDNPPAFTQ 217
Query: 110 SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+Y S+PE+VP+GT + +VSA+D D G N +++++
Sbjct: 218 PEYHKSVPENVPLGTRLLMVSATDPDEGANGEVTYS 253
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
++V D NDN+P+F YS+ IPE+ P G + VSA DAD N++++++ E
Sbjct: 413 LLVTDVNDNSPVFHQDSYSVYIPENNPRGASIFSVSAQDADSSENAQITYSLAE 466
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
L+ I V D NDN P ++ + ++PE+ P GT++ ++S D D G N
Sbjct: 300 LMARTKVLIKVLDVNDNAPEVSITCVTTAVPENFPPGTIIALISVHDQDSGDN 352
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL- 157
D NDN P F + + + E P GT + + D D+G NS S+ +L N FS D+
Sbjct: 98 DINDNAPQFQLEELEFKMNEITPPGTRIPLPFGQDLDVGTNSLQSY-QLSSNPHFSLDVQ 156
Query: 158 -------RVEWVINRSVDQ 169
R E V+ R +D+
Sbjct: 157 QGTNRLQRPEMVLQRLLDR 175
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKH-KGSNPGPLVGTCNTTIIVEDQNDN 103
KF + T + K VG L R E K T H + + + I++ D NDN
Sbjct: 3157 KFSLDKETGVLKTVGQLDR-----ESQAKYILTAHVQDRDKTSWECSSQLEILISDLNDN 3211
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P F + YS ++PEDV VGT+V V A+D D+G+N K+ + L+
Sbjct: 3212 APRFSMQSYSATLPEDVEVGTLVTKVHATDDDIGINRKIRYEFLD 3256
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG--------PLVGTCNTTI 95
+ F + TT + G L R R + L++ T G N L +
Sbjct: 945 SDFRVDRTTGVLTVFGKLDRE-RQSSYELRIRATDKNGGNDKGEPDFDNPALYSEALVRV 1003
Query: 96 IVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGL 152
V+D NDN P F ++ Y++ + EDVPV +V+ V+ A+D D G + ++ E+E G
Sbjct: 1004 SVDDVNDNAPKFALTSYTVKVREDVPVWSVIAVIEATDPDEGPGGIIEYSFSEEMESEGF 1063
Query: 153 FSSD 156
F D
Sbjct: 1064 FGID 1067
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 66 RTEEHWLKVENT--KHKGSNPGPLVGTCNT-TIIVEDQNDNNPIFPVSQYSLSIPEDVPV 122
R +++ L+++ T +H G N L+ T + + D ND NP+F ++Y ++ ED PV
Sbjct: 164 RKDKYVLEIKATARRHDGKNRVTLLEAQTTVAVTILDTNDLNPLFYPTEYEATVTEDTPV 223
Query: 123 GTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ VSA DADLG N ++ ++ E F+
Sbjct: 224 HKSILKVSAEDADLGTNGEIYYSFAEKTEQFA 255
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T G L R ++ + + + V S+P PL T+ V D+ND+ P
Sbjct: 2844 FAVDPKTCRVTLSGNLDREVK-DSYMIGV--LAETDSSP-PLTALAEITLQVLDENDHAP 2899
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
F + YS+++ E++ GT + V A D DLG N ++ ++ F SD+
Sbjct: 2900 KFESNPYSIAVAENIEEGTSILKVVAHDNDLGSNGEVRYS-------FGSDI 2944
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++++L ++ G P PL I V D NDN P+F + Y SI ED G
Sbjct: 3386 RAKDYFLTIQAID--GGVP-PLTNHATVNITVLDSNDNAPMFSQASYRASIREDAKAGEK 3442
Query: 126 VQVVSASDADLGVNSKLSWN 145
V V A+D D N ++S++
Sbjct: 3443 VVQVFANDLDSNENGQVSYS 3462
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 62 KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP 121
K++L E+H K+ S+ G G + V D+NDN+P+F + +Y SI ++
Sbjct: 2648 KKSLDREKH--KLFEIPVMASDGGGKSGFVIVRVKVTDENDNSPVFLLKEYKASIYGNLT 2705
Query: 122 VGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + V A DAD G +K+ ++ EP
Sbjct: 2706 LNSAFLKVKALDADEGDAAKIIYSIFEP 2733
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 24 RYLHLRPKSGMYAPAFTFSIAK-FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGS 82
+++ R S + + +I + F NP+T G + R + +K N +
Sbjct: 1772 KHIEARSTSSLQFEIVSGNIGEAFFINPST------GVISTQERLDYEDVKFYNLSIAAT 1825
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV---------QVVSASD 133
+ CN + V D+NDN P F + Y+ + E +G++V V+ A D
Sbjct: 1826 SMSGASAQCNVIVHVLDRNDNAPQFVQAVYTGQVSEAASIGSLVFSANSTSSPLVIKAED 1885
Query: 134 ADLGVNSKLSWNELE--PNGLFSSD 156
AD +N+ L+++ +E P F D
Sbjct: 1886 ADSELNALLNYDIVEELPRKFFHID 1910
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
D NDN PIF Y + +PE PV + V + SDAD G N+
Sbjct: 416 DLNDNAPIFSTEIYDVKVPETAPVNSPVIRLKVSDADQGKNA 457
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + +G L R R +E++L + T + P + V D NDN P
Sbjct: 844 FGIDPDTGELRLIGRLDRE-REDEYFLNI--TVYDLGKPQKSASRM-LAVSVLDVNDNAP 899
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
F + S + E GT++ + +DADLG N++++++ + +SD RV+
Sbjct: 900 KFEKALASFRVSEAALNGTIIFRANTTDADLGENAQVAYSLVTD----TSDFRVD 950
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
I V D NDN+P F S+ + + E+ P GT V V A D D G N+ +S++
Sbjct: 519 IYVIDTNDNDPEFEKSEMLVYLDENEPAGTSVCKVVARDKDSGENAYISYS 569
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L T + + V D NDN P F S Y+ + E+ G V VVSASD DL ++ KL +
Sbjct: 2467 LSSTAHVWLTVIDMNDNPPKFEQSSYNCFLSEEAERGQFVTVVSASDPDL-LDDKLVY 2523
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-------NE 146
+I+V D ND P F Y++SI E GT + + A D D G+NSK+ + +E
Sbjct: 2362 SILVLDVNDCPPEFSQDSYNISISEAALFGTELLRLVARDNDTGINSKIRYAIENRTADE 2421
Query: 147 LEPN--GLFSSDLRVEWV-INRSVDQHT 171
L N LF D V + RS+D T
Sbjct: 2422 LGENTLDLFHVDPEEGIVYLKRSLDHET 2449
>gi|189054038|dbj|BAG36545.1| unnamed protein product [Homo sapiens]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 210 GQPYFSVDSKTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVND 269
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 270 NPPRFPQRHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTD 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ G +
Sbjct: 454 REEFSWHNITVLAMEMNNPSQ-VGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKAGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPRNGQHFYYSLAPEA 537
>gi|293343039|ref|XP_001065031.2| PREDICTED: protocadherin beta-6 [Rattus norvegicus]
gi|293354898|ref|XP_001055698.2| PREDICTED: protocadherin beta-6 [Rattus norvegicus]
gi|149017300|gb|EDL76351.1| rCG49357 [Rattus norvegicus]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R E+ L+++ T G +P P GT I+V D NDN P F Y + +PE+
Sbjct: 195 LNKALDREEQDQLRLKLTAVDGGSP-PRFGTTEIQILVLDINDNAPEFAQELYEVQVPEN 253
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
PVG+++ VSA D D G ++S+ + +GL
Sbjct: 254 NPVGSLLITVSARDLDTGSFGEVSYGLSQDDGL 286
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
G L G C+ + V D NDN P +S + IPE++P G +V V S SDAD G N ++
Sbjct: 323 GGLTGKCSLVVQVLDMNDNAPEVILSSLNSPIPENLP-GIIVAVFSVSDADSGSNQQV 379
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P F + Y+L + E+ + +SA+D+D G N+ ++++ L N
Sbjct: 436 TVQVSDINDNAPTFTQTSYTLFVHENNSPALHIGTISATDSDSGTNAHITYSLLPRN 492
>gi|395817786|ref|XP_003782333.1| PREDICTED: protocadherin gamma-A12 [Otolemur garnettii]
Length = 793
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL E H L V T G +P GT ++V D NDN P F S+Y +S+P
Sbjct: 203 LERALDREVKAAHHLIV--TASDGGDP-VRTGTARIRVVVLDANDNAPAFAQSEYHVSVP 259
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+V VGT + +V+A+D D G N+++ ++
Sbjct: 260 ENVAVGTQLLLVNATDPDEGANAEVKYS 287
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P+FP + YS+ IPE+ P G + V+A D D N++++++
Sbjct: 438 PLSTETHIILNVADTNDNPPVFPKASYSVYIPENNPRGASLVSVTAHDPDCEENAQITYS 497
Query: 146 ELE 148
E
Sbjct: 498 LAE 500
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
I V D NDN P V+ + S+PE+ P GT++ +++ +D D G N K+
Sbjct: 342 ITVLDVNDNAPEVVVTSLTSSVPENSPRGTLIALLNVNDQDSGENGKV 389
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P F ++ + + E+ +G + A D D+G NS S+ L PN FS D
Sbjct: 130 VKDINDNAPYFRENELEIKMSENAAIGMRFPLPHAWDPDIGKNSLQSY-ALSPNTHFSLD 188
Query: 157 LR--------VEWVINRSVDQH 170
++ E V+ R++D+
Sbjct: 189 VQNGADGNKYPELVLERALDRE 210
>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
Length = 3300
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + E P G+ + VSA+D D G N
Sbjct: 2349 AHDGPHQGHANLTVLVEDVNDNAPTFSQSLYQAMLLEHAPPGSAILSVSATDRDSGANGH 2408
Query: 142 LSWNELEPNGLFSSD 156
+S++ P FS D
Sbjct: 2409 ISYHLASPAEGFSVD 2423
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FP YS+ +PE
Sbjct: 1806 GTMRPLDREVEPAFQLKIEARDGGQPA-LSATLLVTVTVLDANDHAPTFPEPAYSVEVPE 1864
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N +++
Sbjct: 1865 DAPAGTLLLQLQAHDPDAGANGHVTY 1890
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2579 PRSSAVPVTVTVLDVNDNPPVFTRASYRVAVPEDTPVGAELLQVEASDADPGPHGLIRFT 2638
Query: 144 WNELEPNGLF-----SSDLRV 159
+ +P GLF S DLR+
Sbjct: 2639 LSSGDPLGLFELDESSGDLRL 2659
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2691 TIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAVDGDAGAFGRLHYSLLE 2745
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL+ R E+ + + G +P PL+ + V+D+ND+ P F + SL +PE
Sbjct: 1703 TLRALDREEQEKINLTVYARDGGSP-PLLAHVTVRVAVDDENDHAPAFGSAHLSLEVPEG 1761
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
T+ + ASD D G N +L + L +P G F DL
Sbjct: 1762 QDPQTLA-TLRASDPDAGANGQLQYRILDGDPAGAFVLDL 1800
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P++ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 519 FSIDPSSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 574
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 575 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 614
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T V L R R E + L V + H GS P T TI V D ND P
Sbjct: 1590 FRLHPSTGALSVVRPLDREQRAE-YLLTVVASDH-GSPPRS--ATQLLTISVADVNDEAP 1645
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F +YS+ + E+ P G + + A+D DLG N +++
Sbjct: 1646 TFQQQEYSVLLRENSPPGVSLLTLRATDPDLGANGHVTY 1684
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P+ ++++D NDN+P FP + ++ +P GT + + A D D G N
Sbjct: 866 GSGAPPVFALARVRVLLDDVNDNSPAFPAPEDTVFLPPGTAPGTPIYTLRALDPDSGANG 925
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 926 RVTFTLLAGGG 936
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + T++ D NDN+P
Sbjct: 1152 FRIHPQTGEVTTLQTLDRE-RQSSYQLLVQ-VQDGGSPPRSTTGTVHITVL--DLNDNSP 1207
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1208 TFLQASGAAGGGLPVQVPDGVPPGTLVTTLQAKDPDAGENGTILYTLTGPGSELFS 1263
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G W
Sbjct: 2255 LVGSATLTVLVVDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PALWYV 2310
Query: 147 LEPNG 151
L P+G
Sbjct: 2311 LSPSG 2315
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 661 GGLKSMVYVKVFVSDENDNPPRFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSY 720
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 721 HILAGNSPPLFALDEHSGLLTVAWPLARRAN 751
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
V + ++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2461 VARATVHVQLQDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2508
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 32 SGMYAPAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTC 91
+GM AP F A+ + T L + +RT + +++ + P T
Sbjct: 68 AGMAAPPMYFISAQEGSGVGTDL--AIDEHSGVVRTARVLDRERRDRYRFTAVTPDGATV 125
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
T+ V D ND+ P FP ++ L +PE +GT + A DAD G
Sbjct: 126 EVTVRVADINDHAPAFPQARAVLQVPEHTALGTRYPLEPARDADAG 171
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y ++ E
Sbjct: 209 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHGTVSE 264
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 265 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 306
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1534 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1580
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASD--ADLGVNSKLSWNELEPNGLFSSD 156
P+F QY S+PEDV GT V VV A + LG + L+ + +P GLFS D
Sbjct: 786 PVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVT-LALSGGDPRGLFSLD 838
>gi|332688250|ref|NP_001193887.1| cadherin-12 precursor [Bos taurus]
gi|296475699|tpg|DAA17814.1| TPA: cadherin 12, type 2 (N-cadherin 2) [Bos taurus]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|395830723|ref|XP_003788468.1| PREDICTED: cadherin-20 [Otolemur garnettii]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 221 GVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQ 280
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E P+ + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 281 MSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADTFDISTD 327
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F +
Sbjct: 336 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPA 392
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 393 FYFVEVPEDVAIGTTIQIISAKDPDVTNNS 422
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R + + L+ + + P + I ++D NDN P
Sbjct: 107 FTIDDTTGDIHAIQRLDREERAQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 163
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y ++PE PVGT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 164 KFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVD 217
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ TI V D NDN P FP Y + E+ VG +
Sbjct: 454 REEFSWHNITVLAMEMNNPS-QVGSVPVTIKVLDVNDNAPEFP-RFYEAFVCENAKVGQL 511
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+Q VSA D D N + + L P
Sbjct: 512 IQTVSAVDQDDPHNGQHFYYSLAPEA 537
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
++ G T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+
Sbjct: 865 ATDSGGRSDTATVHINITDANNFAPIFENAPYSSSVFEDAPVGTTVLVVSATDSDVGINA 924
Query: 141 KLSW--NELEPNGLFSSD 156
++++ NE NGL ++D
Sbjct: 925 QITYSLNEESINGLGTAD 942
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G NP L T + I V D NDN P+F Y SI ED VGT V VSASD D+
Sbjct: 972 TAKDGGNPS-LSDTTDVEISVTDVNDNAPMFKNPLYQSSILEDALVGTSVIQVSASDPDI 1030
Query: 137 GVNSKLSW 144
G+N ++ +
Sbjct: 1031 GLNGRIKY 1038
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL T I +ED ND+
Sbjct: 1048 GSFVIDPTSGTIRTNKGLDRESVAIYHLTAI--AVDKGS--PPLSSTVEVQIRLEDVNDS 1103
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 1104 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 1145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGLFS 154
V D NDN P F SQ+ S+ E+VPVG + V A D+D G N+++S+ +E + N +
Sbjct: 673 VIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEISYSISERDDNFPLA 732
Query: 155 SDLRVEWV 162
D R WV
Sbjct: 733 VDPRTGWV 740
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + T + +L R L + H+ +V T S P P GT + V D ND++P
Sbjct: 401 FKVDSRTGVVTTSASLDREL-MDVHYFRVVATDD--SFP-PRSGTTTLQVNVLDCNDHSP 456
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
F Q+ SI E VG+ V + A+D D+G N+++ +
Sbjct: 457 TFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEY 495
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
V T+K+ R E+ + G P P + + I V+D NDN+P F Y ++
Sbjct: 740 VQTIKQLDREEQSRFTFQVVAKDGGVP-PKSASSSVVITVQDVNDNDPNFNPKYYEANVG 798
Query: 118 EDVPVGTVVQVVSASDAD 135
ED P GT V V+A+D D
Sbjct: 799 EDQPPGTPVTTVTATDPD 816
>gi|74228152|dbj|BAE23961.1| unnamed protein product [Mus musculus]
Length = 711
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 174
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 175 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|403298924|ref|XP_003940250.1| PREDICTED: cadherin-12 [Saimiri boliviensis boliviensis]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|281351893|gb|EFB27477.1| hypothetical protein PANDA_018352 [Ailuropoda melanoleuca]
Length = 584
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 20 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 79
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 80 IGRVKANDQDIGENAQSSYDIIDGDG 105
>gi|23956046|ref|NP_034087.1| protocadherin alpha-7 precursor [Mus musculus]
gi|13876268|gb|AAK26054.1| protocadherin alpha 7 [Mus musculus]
Length = 937
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E +++ T G P L GT I V D NDN P+F S Y++ +PE+
Sbjct: 196 LRKPLDREEAAEIRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPVFDRSLYTVKLPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
VP GT+V V+ASD D GVN + ++ FSSD+
Sbjct: 255 VPNGTLVIKVNASDLDEGVNGDVMYS-------FSSDV 285
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAMDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G C + V D NDN P VS SL + ED G VV ++S D D G N +++ +
Sbjct: 330 LPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCS 388
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q +L I E + + + ASDAD+G N+ L++ L N FS D
Sbjct: 123 VKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFSLD 181
Query: 157 L 157
+
Sbjct: 182 V 182
>gi|432112869|gb|ELK35459.1| Cadherin-20 [Myotis davidii]
Length = 716
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E++ + K G G L GT I + D ND
Sbjct: 125 GQPYFSVDSKTGVIRTALTNMDREAKEYYEVIIQAKDMGGQLGGLSGTTTVNITLSDVND 184
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
N P FP Y +S+ E PV + V V A D D G+N+++ + ++ +G + D+ +
Sbjct: 185 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDINTD 242
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+K+ L E K K +G+NP GP T I VED D P+F
Sbjct: 251 TVKKPLSFESK--KSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDV-DEPPVFEPG 307
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++SA D D+ NS
Sbjct: 308 FYFVEVPEDVTIGTTIQIISAKDPDVTNNS 337
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E W + + +NP VG+ + TI V D NDN P FP Y + E+ G +
Sbjct: 369 REEFSWHNITILAMEMNNPSQ-VGSVSVTIKVLDVNDNAPEFP-RFYEAFVCENAKSGQL 426
Query: 126 VQVVSASDAD 135
+Q VSA D D
Sbjct: 427 IQTVSAVDHD 436
>gi|426382407|ref|XP_004057797.1| PREDICTED: cadherin-8-like [Gorilla gorilla gorilla]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 77 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 136
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINR 165
+ V A+D D+G N++ S++ ++ +G LF +SD + + I R
Sbjct: 137 IGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIR 180
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P P G CN T+ V+D+ND++P F ++Y+ ++ E+V T+V V A+DAD G N+K++
Sbjct: 1769 PSPRQGFCNITVSVDDENDSDPRFTQNRYTATLAENVQPDTIVMTVQATDADRGHNAKIT 1828
Query: 144 WN 145
++
Sbjct: 1829 YS 1830
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
+L R +R + + L V T + G PG T N + V D NDN+P+F Y +I E+
Sbjct: 1010 SLDREMR-DRYTLTVVATDN-GLPPGSAAATVN--VFVNDANDNDPVFTRDVYQFTIEEN 1065
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+ G +V VVSA+D DL N+ L ++ L NG F
Sbjct: 1066 LEKGALVGVVSATDKDLDANAALRYSLLPVNGSF 1099
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 46 FIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
F +P+T V +LK+ L E EH V + G + PL + VED+ND
Sbjct: 2581 FEVDPST----GVISLKKPLDFEMSGEHRFIVRASD--GHSTQPLSAIATIAVKVEDEND 2634
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N P FPV Y + E+ P GTVV A+D D G KL ++
Sbjct: 2635 NGPAFPVGSYLEFVAENAPAGTVVFTAHANDMDRGPYGKLKYS 2677
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP PL G I ++D NDN PIF S+Y S+ E+ +GT V V A+D D G N
Sbjct: 185 GGNP-PLRGFMTVNITIQDVNDNQPIFNQSRYFASVAENATIGTSVLQVFATDTDAGDNG 243
Query: 141 KLSWN 145
+++++
Sbjct: 244 RITYS 248
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L GT + + D NDN PIF S Y++S+ ED VG V VSA+D D GVN+ +++
Sbjct: 514 LTGTATVRVTIRDVNDNEPIFDQSFYNVSVREDEAVGHCVLKVSATDPDCGVNAIVNY 571
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE--PNGL 152
I VED NDN P F Y ++ E+ P GT V VSA+D D+G N L++ E +G+
Sbjct: 1571 IHVEDINDNPPRFVRPLYEAAVAENSPAGTFVVKVSATDKDVGTNGNLTYAIPEGIADGM 1630
Query: 153 FSSD 156
FS D
Sbjct: 1631 FSVD 1634
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGL 152
T+ V D+NDN P+F V Y S+PE G V ++A+DAD G N+++ ++ + P
Sbjct: 2309 TVNVLDENDNAPVFSVQNYRASLPELTEPGYAVLSINATDADKGENARVRYSLAISPTDA 2368
Query: 153 F 153
F
Sbjct: 2369 F 2369
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L GTC I + D NDN P FP +S+ E VGTV+ ++A+D D N L+++
Sbjct: 2202 LTGTCTLRINIVDVNDNQPTFP-PHSVVSVSEGSEVGTVITTITANDVD--TNPTLTYDF 2258
Query: 147 LE---PNGLFSSD 156
+ P+ +FS D
Sbjct: 2259 ADGGNPDRMFSID 2271
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F S ++ + E VP+G + V A D + G N ++++ L N S
Sbjct: 1253 IEVLDLNDNRPTFSTSSFAFKVVEGVPIGQEIGTVIAEDREAGENERVTYTLLSGNAYGS 1312
Query: 155 SDL 157
D+
Sbjct: 1313 FDI 1315
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + I+VED NDN P+F VS+ + I ED PVG + V A D D N ++S++
Sbjct: 1459 LTSSVTARILVEDFNDNAPVF-VSRTRVDIMEDEPVGYPLLHVIAVDRDARDNGRVSYSI 1517
Query: 147 LEPN--GLFSSDL 157
+ N G FS D+
Sbjct: 1518 VSGNEDGAFSLDV 1530
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV--GTCNTTIIVE 98
+SI N T ++ + G + + + V N K + G T + I V+
Sbjct: 2465 YSIENGNINSTFQITSDTGEILLVKTVDREEISVFNLKVLAMDRGSPARNSTADVVIHVD 2524
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSD 156
D NDN P+F + Y + + E +GT + V+A+D D N++LS++ N G F D
Sbjct: 2525 DVNDNPPVFNQTLYEVKVSEAQAIGTALLRVAATDRDHDENARLSYDITSGNDKGCFEVD 2584
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T K T + + V + KGS PL I V+D NDN P F ++Y +++ E
Sbjct: 903 TRKLDFETTQKYALVIGAQDKGS--PPLRSNLTLNIEVQDVNDNPPTFEKNEYQVNVAES 960
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
+ V + V+A D D G N++L++
Sbjct: 961 LAVNSQFLQVNAIDLDTGNNARLTY 985
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G + + DQNDN P F Y+ ++ E GT V VSA+D D+G N+ + ++
Sbjct: 2095 PLYGYATVWVDLLDQNDNAPRFTQDSYTSAVWEGNNKGTFVMQVSATDGDMGANANIIYH 2154
Query: 146 ELEPN 150
++ N
Sbjct: 2155 IVDGN 2159
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G + N I VE +++ P F S Y S+P D VG + V A+D D G +
Sbjct: 2715 QASDVGGQTASVNVQIDVESRDEFAPEFTESSYRFSVPSDADVGYAIGKVLATDRDKGTD 2774
Query: 140 SKLSW 144
++ +
Sbjct: 2775 GRVVY 2779
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP-IFPVSQYSLSIP 117
G L R + H L++E K +G NP P ++V D NDN P I + LS+
Sbjct: 1112 GPLDREAKAV-HELQIE-VKDQG-NP-PRSAKAIVRVMVTDVNDNTPVIVEPEETVLSVR 1167
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E++P GT V + A D D G N+ ++++
Sbjct: 1168 EELPAGTEVVRIRAVDTDEGNNASITYS 1195
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P F + Y ++ E GT V +SA D DLG NS ++++
Sbjct: 406 PLHASRAFNLRVTDTNDNAPQFEQTMYYANVLEVADPGTSVFQLSALDRDLGNNSVVTYS 465
Query: 146 ELEPNGLFSSDLRVEW 161
LE S D +W
Sbjct: 466 ILE-----SPDTHSDW 476
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNG 151
I+V+D NDN PIF V +Y I EDVP GTVV V+ A D D+G N+++ ++ + +
Sbjct: 927 ILVDDVNDNAPIFGVQEYMFKIREDVPRGTVVAVIEAIDKDMGENAEILFSLKEDTQDKN 986
Query: 152 LFSSD-----LRVEWVIN 164
LF D +R E +N
Sbjct: 987 LFKIDKHSGAIRTEGYLN 1004
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 87 LVGTCNTTII--VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ C + II V D NDN PIF + Y +SI ED + T+V V A+D D G+N K+ +
Sbjct: 3106 FIRECVSEIIITVNDINDNAPIFSMPNYRVSIQEDAQLQTLVTKVHATDKDFGINRKIKY 3165
Query: 145 NELEPN 150
+ + N
Sbjct: 3166 SLIGTN 3171
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 26 LHLRPKSGMYAPAFTFSIAK------FIANPTTRLYKNVGTLKRALRTEEHWLKVE--NT 77
+ R + Y F+IA F +P + + +G L R R E+ L + +
Sbjct: 753 IEARDRDLGYNGKLVFAIADGDYDSVFRIDPDSGELQIIGYLDRE-RLSEYILNITVYDL 811
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
H + ++ I + D NDN P+ S +L + E+ P G+VV V A+DADLG
Sbjct: 812 GHPTKSDSKIL-----PITITDANDNPPVLQKSLATLRLTENAPKGSVVYCVHATDADLG 866
Query: 138 VNSKLSW 144
+N+++++
Sbjct: 867 INAEITY 873
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 66 RTEEHWLKVEN--TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
+TEE+ LKV + +G N + V D+ND +P+F ++Y++++PED P
Sbjct: 99 KTEEYNLKVRAHISYARGKNISSYETETAIHVQVLDRNDLSPLFYPTEYAVTVPEDTPKH 158
Query: 124 TVVQVVSASDADLGVNSKLSWNEL 147
+ V A DADLG+N ++ ++ L
Sbjct: 159 HSILKVIADDADLGINGEIYYSFL 182
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF N +T + GTL +T+ ++L V+ G +P PL I ++D NDN
Sbjct: 3279 KFNINSSTGVLWVNGTLDYE-KTKFYFLTVQAID--GGSP-PLSNIAYVNISIDDVNDNT 3334
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
P F + Y S+ EDV + + V A+D D +N + +N ++ + L
Sbjct: 3335 PTFTQNNYRASVKEDVNIDVPIIDVKATDEDSNLNGIIKYNIVKGDSL 3382
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 53 RLYKNVGTLKRALRTEEHWLKVENTKHKGSNPG-PLVGT-CNTTIIVEDQNDNNPIFPVS 110
+ K+ G +K + + + N + G P++ + N I + D NDN P F +
Sbjct: 3176 EISKSTGIIKLEKNLDRETISIYNLTLIAEDYGKPIMSSVANIVINILDINDNPPEFSLR 3235
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
QYS + E+V G V V A+ D+GVN+++S+
Sbjct: 3236 QYSSHVHENVTQGFDVCTVHATSKDIGVNAEISY 3269
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F I N + R+ + G + + K+ N KG+N N + V D
Sbjct: 1708 FDIIDGNINESFRINPSTGVIAINANVDYELNKIFNLTIKGTNMASQSSRQNLIVHVLDA 1767
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSAS----------DADLGVNSKLSWNELE 148
NDN P F S+Y + E +G+ VQ++ DAD+G+N L +N L+
Sbjct: 1768 NDNVPKFLQSEYIGRVSEAASLGSYVQIIDDKKKRHLTLNVFDADVGLNGMLQFNILD 1825
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+I + D ND P Y++++PE++P G+ + ++A+D D G N KLS+
Sbjct: 2285 SISIIDVNDCYPEIENDNYNITLPENIPFGSQILKINATDRDSGANGKLSY 2335
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTE---EHWLKVENTKHKGSNPGP-LVGTCNTTIIVE 98
+ F P T L K T +R L E EH L+V + N P L T + V
Sbjct: 1197 VGYFDIEPHTGLLK---TTERKLDRENQSEHILEVSIS----DNGSPILTSTTRVVVSVL 1249
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
D NDN+P+F Y + +P + + V A D D G NS++++
Sbjct: 1250 DINDNSPVFDQRVYKVQVPSTTNMNESIFQVHAIDNDDGENSRITY 1295
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LF 153
I V+D NDN P+F Y S+ GT++ V A D D N ++ + + NG LF
Sbjct: 2083 ISVQDINDNCPMFVNMPYYASVSVGFTKGTIIMKVKAIDLDSAENGEVRYELKKGNGELF 2142
Query: 154 SSDLRV-EWVINRSVDQHTNK 173
D + E I +S++ H K
Sbjct: 2143 KIDRKTGELSIKQSIEGHNRK 2163
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I +ED NDN+PIF + I E+ G+ V ++A D D G N+ +S+
Sbjct: 454 ITIEDMNDNDPIFENMNKVIYINENELAGSFVTKLTAKDRDSGENAYISY 503
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 91 CNTTII---VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
C++ ++ V D NDN P+F + YS+ + E+ P+G V +DAD NS
Sbjct: 3423 CDSVLVNVAVLDANDNAPVFSQANYSVVLQENRPLGYVFIRFDVTDADEAPNS 3475
>gi|109078984|ref|XP_001087882.1| PREDICTED: protocadherin gamma-A2-like [Macaca mulatta]
Length = 823
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+RAL R EE + G +P L GT + V D NDN P+F +Y +S+PE+
Sbjct: 196 LERALDREEEAVHHLVLVASDGGDP-VLSGTSRICVKVLDVNDNAPVFTQPEYRISVPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
PV T + V+A+DAD G N+++++
Sbjct: 255 TPVDTRILTVTATDADEGYNAQVAY 279
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 55 YKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
Y+ V T RAL E+ + + T G NP L + + V D NDN P F + YS
Sbjct: 402 YRLVTT--RALDREQFSFYNITLTAKDGGNPS-LSTDAHVLLQVADINDNAPTFSRTSYS 458
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
IPE+ P G V V+A D D N+ ++++ E
Sbjct: 459 AYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG L T I V D NDN P F ++ + S+ ED P GTV+ + + D D G N+ ++
Sbjct: 325 PGLLTRT-KVIITVLDVNDNAPEFYITSATSSVSEDSPPGTVIGLFNVHDRDSGQNAFIT 383
Query: 144 WN 145
+
Sbjct: 384 CS 385
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F V + L I E G + + +A DAD+G N+ L L N FS D
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENA-LQKYALNLNDHFSLD 181
Query: 157 LRV--------EWVINRSVDQH 170
+R E V+ R++D+
Sbjct: 182 VRSGVDGNKYPELVLERALDRE 203
>gi|327270489|ref|XP_003220022.1| PREDICTED: protocadherin-10-like [Anolis carolinensis]
Length = 981
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT T+ V D NDN P+F YS S+PED P GT+V ++ASDAD G N ++ +
Sbjct: 239 GTARVTVAVLDANDNVPVFDRPSYSASLPEDAPPGTLVVRLNASDADEGANGEVEY 294
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K P + C + + D NDN P ++ + + ED P GTVV V+S D D G N
Sbjct: 338 KDRGPSAVAVHCRVLVQLLDVNDNAPEVTLTSLAAPVMEDAPPGTVVAVISVRDRDSGDN 397
Query: 140 SKLS 143
++S
Sbjct: 398 GRVS 401
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIF----------PVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P G + V DQNDN P+ S+ + IP G +V VSA DAD
Sbjct: 559 PRSGNATLHVFVLDQNDNAPVIVAPTPRNNASSSSEVEVEIPRSAEAGFLVGKVSARDAD 618
Query: 136 LGVNSKLSW 144
G N++LS+
Sbjct: 619 AGQNARLSF 627
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN-GLFSS 155
V D NDN P FP ++ L + E G + SA D D+G N+ ++ L PN G FS
Sbjct: 137 VLDINDNAPRFPWPEFVLEVAESALPGARFPLESAHDPDVGPNALRTY-RLGPNEGFFSL 195
Query: 156 DLR--------VEWVINRSVDQHTNK 173
++ E V+ R++D+ +
Sbjct: 196 AVQARRDGSKFAELVLERALDREARR 221
>gi|1377895|dbj|BAA04799.1| OB-cadherin-2 [Homo sapiens]
Length = 693
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQISVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|297698896|ref|XP_002826542.1| PREDICTED: cadherin-11 isoform 1 [Pongo abelii]
gi|397506454|ref|XP_003823742.1| PREDICTED: cadherin-11 isoform 1 [Pan paniscus]
gi|426382411|ref|XP_004057799.1| PREDICTED: cadherin-11 [Gorilla gorilla gorilla]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|355691682|gb|EHH26867.1| hypothetical protein EGK_16941 [Macaca mulatta]
Length = 729
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R E+ +++ T G P P T I V D NDN P F Y + IPED
Sbjct: 198 LNRALDREEQPEIRLTLTAVDGGTP-PRSSTALVRIEVMDINDNVPEFAKLLYEVQIPED 256
Query: 120 VPVGTVVQVVSASDADLGVNSKLSW 144
P+G+ V +VSA D D+G N ++S+
Sbjct: 257 SPIGSQVAIVSARDLDIGTNGEISY 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++ L P
Sbjct: 438 NITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 496
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D ND++P+F + L IPE + GT + A D D+G NS ++ + PN F +
Sbjct: 125 IRDINDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYT-ISPNFHFHLN 183
Query: 157 LR--------VEWVINRSVDQH 170
L+ + V+NR++D+
Sbjct: 184 LQDSLDGIILPQLVLNRALDRE 205
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 51 TTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVS 110
T RL G L + ++ + ++ G L GTC + V D NDN P +S
Sbjct: 293 TFRLSAKSGKLLLRQTLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMS 352
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
IPE++ T++ V S SD D G N +
Sbjct: 353 TLINQIPENLQ-DTLIAVFSVSDPDSGDNGR 382
>gi|344272204|ref|XP_003407925.1| PREDICTED: cadherin-12 [Loxodonta africana]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSVGPFKDTATLKISVLDM-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|332228000|ref|XP_003263178.1| PREDICTED: cadherin-11 [Nomascus leucogenys]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|328782343|ref|XP_392736.4| PREDICTED: cadherin-87A-like [Apis mellifera]
Length = 1904
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G V + I + D N+N P+FP Y+ S+PE P+GTVV+ V+A+DAD G+N++L +
Sbjct: 709 GIFVDSAIVNITIRDVNNNAPVFPHELYTASLPEISPIGTVVEEVTATDADTGINAELVY 768
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G N TII+ D+NDN+PIF + Y + V V V+ASD D+G N L +
Sbjct: 1491 GYVNVTIIILDENDNSPIFERNDYYAGVNSMANVNDFVTKVTASDLDVGDNGTLHY 1546
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLS 143
V T T+ ++D ND P F +Y++ IPE+VP GT + ++ D D+G+NS S
Sbjct: 378 VSTAEATVTIKDVNDEPPTFNRREYNIEIPENVPNGTPLPHLDMTVKDPDVGLNSVFS 435
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L GT I VE+ ND P F + ED P+GTV + A+D D
Sbjct: 815 LTGTTTLMINVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPD 863
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
L T T+ + D NDN+P F Y+ + E P GT V ++A D D G
Sbjct: 493 LSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTPVITITAKDRDSG 543
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHW-----LKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
F+ NP T V TL + L EE+ + +E+ G P +VG + +IV D
Sbjct: 111 FVVNPRT----GVITLAKPLDREENGTIRFRVTLEDEVPAGQQPN-IVG-VDAYVIVLDD 164
Query: 101 NDNNPIFPVSQYSLSIPEDVPVG-TVVQVVSASDADL 136
NDN P F Y ED+PVG T++ + D DL
Sbjct: 165 NDNPPRFLNVPYEAVAEEDLPVGSTILSGIKVIDPDL 201
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L T + V + ND +P F Y+ S+ E+ P GT V VV A+D D G ++S++
Sbjct: 1042 LSATTKVIVTVININDQDPKFEKELYNASVKENSPPGTHVIVVKATDGDEGPFGEVSYS 1100
>gi|269995999|ref|NP_001019303.2| protocadherin beta-8 precursor [Pan troglodytes]
Length = 801
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL R EE L++ T G +P P GT I V D NDN P F Y I ED
Sbjct: 197 LDKALDREEEAELRLTLTALDGGSP-PRSGTAQVYIEVVDVNDNAPEFEQPFYRAQISED 255
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
P+ +V VSA+D D GVN ++S++ + + S V+++
Sbjct: 256 SPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFTVDFL 298
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G G C I V D ND+ P +S ++ IPE+ P TVV + S SD D G N
Sbjct: 321 EARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSGEN 379
Query: 140 SKLSWN 145
K+S +
Sbjct: 380 GKISCS 385
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
PG L N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++
Sbjct: 430 PG-LTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
Query: 144 WNELEPN 150
++ L P
Sbjct: 489 YSLLPPQ 495
>gi|157649936|gb|ABV59361.1| protocadherin nu14 [Callorhinchus milii]
Length = 988
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T IIV+D NDN P+FP S+Y +S+ E++P GT+V ++ASDAD G N ++ ++
Sbjct: 223 TAQIMIIVQDANDNVPVFPQSEYKVSLLENIPQGTLVMKLNASDADEGYNGEIVYS 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 87 LVGTCNTTIIVEDQNDNNPIF--PVSQYSLSIPEDVPV----GTVVQVVSASDADLGVNS 140
L G + II+ DQNDN+P+ P ++ ++ E V G +V VSA DAD G N
Sbjct: 543 LSGNVSVNIIILDQNDNSPVIVSPSPEFGSTVTETVSRLAEPGYLVSKVSAIDADTGQNG 602
Query: 141 KLSWNELEPN--GLF--SSDLRVEWVINRSVDQHTNK 173
+LS+ ++ GLF S D W I VD+ NK
Sbjct: 603 RLSYQIVQATDPGLFTISPDTGEIWTIRSVVDKDANK 639
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + V D NDN P F Y+ + E+ +GT + V+A D D NS+L+++
Sbjct: 432 PLTAKKHIRLEVSDINDNAPRFAQPLYTAHVMENNVIGTSIYSVTALDPDANENSRLTYS 491
Query: 146 ELE 148
LE
Sbjct: 492 LLE 494
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P FP SQ+ L I E G + SA D D G N+ L EL + FS
Sbjct: 121 VLDVNDNAPSFPKSQFRLEISEMAVPGARFPLESAHDPDAGTNA-LQTYELAASEYFS 177
>gi|156365971|ref|XP_001626915.1| predicted protein [Nematostella vectensis]
gi|156213808|gb|EDO34815.1| predicted protein [Nematostella vectensis]
Length = 850
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D NDN P F S+YS ++ E++PVGT V +V+A D D G+NS++ ++ +G+FS
Sbjct: 631 ISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFS 690
Query: 155 -----SDLRVEWVINR 165
+R++ INR
Sbjct: 691 IEPSTGQIRLQKAINR 706
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
+ F +P T + K L+R +T + L + H + T +I+V D NDN
Sbjct: 55 SDFTLDPNTGMIKTARNLERQ-QTFSYNLTIGAADHGLPS---FSATTRVSIVVGDLNDN 110
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDLRV 159
NP+F + YS ++ E+ PVGT + V+A+DAD G N+ ++++ + +GLF + +V
Sbjct: 111 NPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKV 168
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN+P FP QY + + PVGT+V V+A D D+G N +++
Sbjct: 515 GGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTY 574
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 30 PKSGMYAPAFTFSI-----AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNP 84
P SG+ F FSI KF + + + G+L R E + V N +
Sbjct: 361 PDSGLNGRIF-FSINSGSEGKFEIGRSDGVVRVSGSLDR----EAKAVYVLNVSAIDGSY 415
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P G T+ ++D NDN P F +++ + E V VG+V+ +A+D D G N+ +++
Sbjct: 416 SPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITY 475
Query: 145 NELEPNGLFSSDLRVEWVINRSVDQHTNK 173
+ P +S+ I R +D+ T +
Sbjct: 476 SMSYPGFAINSNTG-SVTITRPLDRETKQ 503
>gi|426229728|ref|XP_004008938.1| PREDICTED: protocadherin beta-10 [Ovis aries]
Length = 799
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL R ++ + T G P P G N I++ D NDN P F + Y PE+
Sbjct: 196 LDRALDREKQQEFSLTLTALDGGLP-PRSGATNIHIVILDVNDNAPQFSQAIYETQAPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
PVG+ + VSA DAD G+N+ +S++
Sbjct: 255 SPVGSFIAQVSAGDADSGINADISYS 280
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
N T++V D NDN P F + Y+L + E+ + VSA+D D G N++++++
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|307207662|gb|EFN85300.1| Cadherin-87A [Harpegnathos saltator]
Length = 1705
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G V + I V D N+N P+FP Y+ SIPE P+GTVV V+A+DAD GVN++L +
Sbjct: 512 GIFVDSALVNITVRDVNNNAPVFPHDIYTASIPEISPIGTVVAEVTATDADSGVNAELVY 571
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 32 SGMYAPAFTFS-----IAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKH------- 79
+G AFT + IA + +P + Y N+ + +RT + + E TK
Sbjct: 780 TGAIVGAFTATDADSNIAGYAIDPPSP-YFNIDNITGIVRTSQ-VIDYEETKQLEFTVIA 837
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
S L T T+ V + ND +P F QY+ S+ E+ P GT V VV A+D D G
Sbjct: 838 YDSGVPQLSATAKVTVTVINVNDQDPKFEKEQYNASVKENSPPGTRVTVVKATDDDEGTF 897
Query: 140 SKLSWN 145
+S+N
Sbjct: 898 GDVSYN 903
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 88 VGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ--VVSASDADLGVNSKLSWN 145
V T T+ ++D ND P F +Y++ IPE+VP GT + ++ D D+G NS S
Sbjct: 182 VSTAEATVTIKDVNDEPPTFNRREYNIEIPENVPDGTPLPNLDMTVKDPDVGSNSVFSLR 241
Query: 146 ELEPNGLFS 154
+ G F+
Sbjct: 242 LEDITGAFT 250
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P G N TI+V D+NDN PIF + Y + + V V+ASD D+G N L +
Sbjct: 1291 PEHGHANVTIVVLDENDNPPIFERNDYYAGVNSMANINDFVTKVTASDLDIGDNGTLHY 1349
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L GT I VE+ ND P F + ED P+GTV + A+D D
Sbjct: 618 LTGTTTLMIEVENSNDKAPYFTPETQRAEVTEDTPIGTVFATLKATDPD 666
>gi|332846089|ref|XP_001156354.2| PREDICTED: cadherin-11 isoform 10 [Pan troglodytes]
gi|410217338|gb|JAA05888.1| cadherin 11, type 2, OB-cadherin (osteoblast) [Pan troglodytes]
gi|410217340|gb|JAA05889.1| cadherin 11, type 2, OB-cadherin (osteoblast) [Pan troglodytes]
gi|410260648|gb|JAA18290.1| cadherin 11, type 2, OB-cadherin (osteoblast) [Pan troglodytes]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|410948357|ref|XP_003980907.1| PREDICTED: protocadherin gamma-A3 [Felis catus]
Length = 827
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLV--GTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
L+RAL E+ KV S+ G V G +IV D NDN P+F S+Y LSI E
Sbjct: 196 LERALDREQK--KVHQLVLIASDGGNPVHSGNLYIQVIVLDANDNPPVFTQSEYQLSIQE 253
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
++PVGT + V+A+D D G N+++S+
Sbjct: 254 NLPVGTTLLTVNATDPDEGFNAQVSY 279
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G +P PL + T+ V D NDN P F + YS IPE+ P G + V+A D D N+
Sbjct: 427 GGSP-PLSTNIHITLHVADINDNPPAFSQASYSAYIPENNPRGASIFCVTAQDPDSIQNA 485
Query: 141 KLSW 144
+++
Sbjct: 486 HITF 489
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I ++D NDN P F + + I E GT + +A D D+G+NS +++ L PN FS
Sbjct: 121 IEIKDINDNAPDFLTEKLEIKIGELAAPGTRFPLKTAFDPDVGMNSLQNYH-LHPNDYFS 179
Query: 155 SDLR--------VEWVINRSVDQHTNK 173
++ E V+ R++D+ K
Sbjct: 180 LTVKHVSDGTKYPELVLERALDREQKK 206
>gi|297676180|ref|XP_002816018.1| PREDICTED: protocadherin alpha-4 [Pongo abelii]
Length = 798
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN ++ +
Sbjct: 329 PLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVNGLVTCS 388
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 54 LYKNVGTLKRALRTEEHWLKV--ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
L K +G + R E KV T G P L GT I V D NDN P F +
Sbjct: 188 LVKGLGLILRKSLDREEAPKVFLVLTATDGGKP-ELTGTVQLLITVLDANDNAPAFDRTI 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
Y + +PE+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 247 YKVKLPENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 288
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 179
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TAQDGGSPS-LWATASISVEVADVNDNAPAFARPEYTVFVKENNPPGCHIFTVSAWDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQ-------YSLSIPEDVPVGTVVQVVSASDADLGV 138
PL + V D+NDN P + S +P V VG VV V A DAD G
Sbjct: 544 PLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSELVPRSVGVGHVVAKVRAVDADSGY 603
Query: 139 NSKLSWNELEPN 150
N+ LS+ EL+P
Sbjct: 604 NAWLSY-ELQPG 614
>gi|2804296|dbj|BAA24453.1| cadherin-8 [Rattus rattus]
Length = 532
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 57 NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSI 116
++ +KR R E+ + PL I V+D NDN P F Y ++
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDWETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATV 176
Query: 117 PEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 177 PEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|403256564|ref|XP_003920940.1| PREDICTED: protocadherin alpha-4 [Saimiri boliviensis boliviensis]
Length = 779
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL G C + VED NDN P +L I ED P+GTV+ ++S SD D+GVN +++ +
Sbjct: 329 PLSGHCRVIVEVEDNNDNVPDLQFKSLALPIREDAPLGTVIALISVSDKDVGVNGQVTCS 388
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 54 LYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
L K +G L+++L R E + + T G P L GT I V D NDN P F +
Sbjct: 188 LVKGLGLILRKSLDREEAPEIFLVLTATDGGKP-ELTGTVQLLITVLDANDNAPAFDRTL 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
Y + +PE+V GT+V ++ASD D G+N + + N++ PN
Sbjct: 247 YKVRLPENVSNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 288
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V+D NDN P+FP +Q +L I E P+ + + ASDAD G N++L++ L PN FS
Sbjct: 123 VKDINDNPPVFPATQKNLFIAESRPLDSRFPLEGASDADFGENAQLTYR-LSPNEYFS 179
>gi|334311065|ref|XP_001377243.2| PREDICTED: protocadherin alpha-8-like [Monodelphis domestica]
Length = 809
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
KF NP T +++R L E+ + +V+ T KG NP P+VG C + VED N
Sbjct: 292 KFQINPDTGEI----SIQRYLDFEDINSYKFRVDATD-KG-NP-PMVGHCTIRVDVEDTN 344
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
DN P V+ SL + ED P GTV+ ++S SD D G N
Sbjct: 345 DNAPELSVTSLSLPVREDAPPGTVIALISVSDRDSGAN 382
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++ L EE H L + T G P L GT I V D NDN P F S+Y + I
Sbjct: 196 LRKPLDREEVPEHHLIL--TVTDGGKP-ELTGTVQLLITVLDVNDNAPTFERSEYEVKIL 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKL--SWNEL 147
E+ GT+V ++ASDAD G+N ++ S+N L
Sbjct: 253 ENAARGTLVIQLNASDADEGINGEIVYSFNSL 284
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L + + + + D NDN P F + Y+L + E+ P G+ + VSASD D
Sbjct: 426 TARDGGSPA-LWTSASVMVGIADVNDNAPAFEQTSYTLFVKENNPPGSHIFTVSASDPDA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 EENALVSYSLVE 496
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+FPV + L I E + + ASD D+G N+ L+++ L N F D
Sbjct: 123 IKDINDNPPVFPVKEQKLFISESRLPDSRFPLEGASDPDIGTNALLTYS-LSTNDYFILD 181
Query: 157 LR--------VEWVINRSVDQH 170
++ VE V+ + +D+
Sbjct: 182 VKSKNEQDKLVELVLRKPLDRE 203
>gi|301786002|ref|XP_002928416.1| PREDICTED: cadherin-8-like, partial [Ailuropoda melanoleuca]
Length = 576
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 12 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 71
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINR 165
+ V A+D D+G N++ S++ ++ +G LF +SD + + I R
Sbjct: 72 IGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIR 115
>gi|194579017|ref|NP_001124125.1| uncharacterized protein LOC100170818 precursor [Danio rerio]
gi|190339328|gb|AAI62541.1| Zgc:193751 protein [Danio rerio]
Length = 945
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 41 FSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100
+ I AN Y + K R +E + + T G P P GT + V D
Sbjct: 176 YFILSMQANSFEEKYAELVLNKELDREKEKEVTLILTAVDGGTP-PRSGTVAIHVTVLDA 234
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
NDN P+F + Y +S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 235 NDNAPVFSQAVYKVSLPENSPVDTVVVTVSATDADEGQNGEVTY 278
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDNNP F +L I E G + A+DAD+G NS S++ ++ N F
Sbjct: 122 VQDINDNNPYFGKDLINLEISESAVKGKRFLLEEANDADIGQNSIQSYS-IQNNEYFILS 180
Query: 157 LR--------VEWVINRSVDQHTNK 173
++ E V+N+ +D+ K
Sbjct: 181 MQANSFEEKYAELVLNKELDREKEK 205
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 407 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 462
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 463 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 495
>gi|119603401|gb|EAW82995.1| cadherin 8, type 2, isoform CRA_b [Homo sapiens]
Length = 535
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 238 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 297
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 298 IGRVKANDQDIGENAQSSYDIIDGDG 323
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + S P L I V+D NDN P F Y
Sbjct: 120 DIHAIKRLDREEKAEYTLTAQAVDWETSKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 177
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 178 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 220
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVEDQNDNN 104
F NP T L R T +L K GS PL+ T + I V D NDN
Sbjct: 136 FSINPQTGAIVTNAPLDR--ETTSGYLLTVTAKDGGS---PLLSDTTDVEISVTDVNDNA 190
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 191 PVFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFAIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|51593710|gb|AAH80863.1| Pcdha7 protein [Mus musculus]
Length = 946
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E +++ T G P L GT I V D NDN P+F S Y++ +PE+
Sbjct: 196 LRKPLDREEAAEIRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPVFDRSLYTVKLPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
VP GT+V V+ASD D GVN + ++ FSSD+
Sbjct: 255 VPNGTLVIKVNASDLDEGVNGDVMYS-------FSSDV 285
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAMDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G C + V D NDN P VS SL + ED G VV ++S D D G N +++ +
Sbjct: 330 LPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCS 388
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q +L I E + + + ASDAD+G N+ L++ L N FS D
Sbjct: 123 VKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFSLD 181
Query: 157 L 157
+
Sbjct: 182 V 182
>gi|431912324|gb|ELK14458.1| Cadherin-8 [Pteropus alecto]
Length = 922
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 329 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 388
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINRSVDQHTN 172
+ V A+D D+G N++ S++ ++ +G LF +SD + + + R H +
Sbjct: 389 IGRVKANDQDIGENAQSSYDIIDGDGTALFEVTSDAQAQDGVIRLRKHHID 439
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 240 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 299
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 300 VYSILEGQPYFS 311
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 70 HWLKVE----NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+ LKVE +T + S+ GP T I+VED D P+F Y L + E+ + +V
Sbjct: 474 YTLKVEAANVHTDPRFSSRGPFKDTATVKIVVEDA-DEPPVFSSPTYLLEVHENAALNSV 532
Query: 126 VQVVSASDADL 136
+ V+A D D+
Sbjct: 533 IGQVTARDPDI 543
>gi|426246690|ref|XP_004017125.1| PREDICTED: cadherin-12 [Ovis aries]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|73953934|ref|XP_546363.2| PREDICTED: cadherin-9 isoform 1 [Canis lupus familiaris]
Length = 789
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FHSPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDG 312
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L + K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDAHYGNSAKVVYSILQGQPYFSVD 211
>gi|292620533|ref|XP_002664330.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 810
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 56 KNVGTL--KRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
KNV L K R ++ + + T G P P GT + V D NDN P+F + Y
Sbjct: 191 KNVELLLEKELDREQQKEVTLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPVFSQAVYK 249
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+S+PE+ PV TVV VSA+DAD G N ++++
Sbjct: 250 VSLPENSPVDTVVVTVSATDADEGQNGEVTY 280
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 409 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 465 NNKAGSSICSVSATDPDWRQNGTVVYS------LLSSDV 497
>gi|332234688|ref|XP_003266538.1| PREDICTED: protocadherin alpha-4 [Nomascus leucogenys]
Length = 798
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN
Sbjct: 329 PLSGHCRVIVEVEDSNDNIPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVN 382
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 54 LYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
L K +G L+++L R E + + T G P L GT I V D NDN P F +
Sbjct: 188 LVKGLGLILRKSLDREEAPEICLVLTATDGGKP-ELTGTVQLLITVLDANDNAPAFDRTI 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
Y + +PE+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 247 YKVRLPENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 288
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+F +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFAATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 179
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD N+ +S++ +E
Sbjct: 437 ATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENAMVSYSLVE 496
>gi|195325636|gb|ACF95726.1| cadherin-8 [Mustela putorius furo]
Length = 609
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 173 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 232
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 233 IGRVKANDQDIGENAQSSYDIIDGDG 258
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 84 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 143
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 144 VYSILEGQPYFS 155
>gi|62087430|dbj|BAD92162.1| protocadherin alpha 4 isoform 1 precursor variant [Homo sapiens]
Length = 921
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN
Sbjct: 349 PLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVN 402
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 36 APAFTFSIAKFIANPTTRLYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNT 93
+P FS+ K P L K +G L+++L R E + + T G P L GT
Sbjct: 193 SPNEYFSLEK---PPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP-ELTGTVQL 248
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
I V D NDN P F + Y + + E+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 249 LITVLDANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 143 VRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 199
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 446 TARDGGSPS-LWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADA 504
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 505 QENALVSYSLVE 516
>gi|440906060|gb|ELR56366.1| Cadherin-8, partial [Bos grunniens mutus]
Length = 619
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 55 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 114
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINR 165
+ V A+D D+G N++ S++ ++ +G LF +SD + + I R
Sbjct: 115 IGRVKANDQDIGENAQSSYDIIDGDGTTLFEITSDAQAQDGIIR 158
>gi|348514339|ref|XP_003444698.1| PREDICTED: protocadherin alpha-8-like [Oreochromis niloticus]
Length = 611
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK++L E+ H L V T G P P GT N +I V D NDN P F Y + I
Sbjct: 197 LKKSLDREQKNKHLLTV--TAVDGGKP-PRSGTLNVSITVLDTNDNRPTFKQDTYQIEIF 253
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+V VGT V V+A+D D G N +L ++
Sbjct: 254 ENVSVGTTVAKVNATDPDEGANGELEYS 281
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TLK L E+ + + + PL C + ++D NDN P V+ S ++ ED
Sbjct: 304 TLKGGLDFEDSEVYKLDVQASDKGTPPLTSRCRVIVKIKDVNDNPPEIEVTSLSNTVSED 363
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
G V+ ++S D D GVN K+
Sbjct: 364 SKPGKVISLISVKDKDSGVNGKI 386
>gi|126290961|ref|XP_001377693.1| PREDICTED: protocadherin gamma-A2-like [Monodelphis domestica]
Length = 816
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
GT + V D NDN P+F Y++++PE+VP GTV+ +V+A+DAD G+NS++ +
Sbjct: 224 GTARIRVTVLDANDNAPVFTQPIYTVNVPENVPQGTVLLIVNATDADEGINSQVRY 279
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ D NDN P F + L I E GT + SA D DLG+NS + EL PN FS
Sbjct: 123 ITDVNDNAPRFRAEELELKISETTTPGTQFILESAYDPDLGMNSVQGY-ELSPNHHFS 179
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
E H ++VE G L + V D NDN P ++ + SIPE+ P GT++
Sbjct: 312 AEFHEMEVEAQDGLG-----LRSRAKIHVTVVDVNDNAPEVTITSVTSSIPENAPPGTII 366
Query: 127 QVVSASDADLGVNSKL 142
+ D D G N ++
Sbjct: 367 TLFHVHDRDSGKNGQV 382
>gi|440898521|gb|ELR50004.1| Cadherin-12, partial [Bos grunniens mutus]
Length = 619
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 41 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 100
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE PVG+ + + A D D G N+++ +N + +G
Sbjct: 101 LKVPESSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 138
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 61 LKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
LK+ L E + KVE + H+ + GP T I V D D P+F Y+
Sbjct: 157 LKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFSKPLYT 215
Query: 114 LSIPEDVPVGTVVQVVSASDADLG 137
+ + ED PVGT++ V+A D D+G
Sbjct: 216 MEVYEDTPVGTIIGAVTAQDLDVG 239
>gi|149026446|gb|EDL82596.1| cadherin 10, isoform CRA_a [Rattus norvegicus]
Length = 486
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + V K G G L GT I + D NDN P FP +
Sbjct: 197 GIIRTALPNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIH 256
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
L + E PVGT V V A+DAD G N+++ + ++ +G D+ E
Sbjct: 257 LRVLESSPVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITE 303
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 129 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 188
Query: 152 LFS 154
FS
Sbjct: 189 YFS 191
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I +ED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 344 GPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 393
>gi|3253081|dbj|BAA29049.1| Cadherin-related neural recepter 4 [Mus musculus]
Length = 901
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E +++ T G P L GT I V D NDN P+F S Y++ +PE+
Sbjct: 160 LRKPLDREEAAEIRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPVFDRSLYTVKLPEN 218
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
VP GT+V V+ASD D GVN + ++ FSSD+
Sbjct: 219 VPNGTLVIKVNASDLDEGVNGDVMYS-------FSSDV 249
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L G C + V D NDN P VS SL + ED G VV ++S D D G N +++ +
Sbjct: 294 LPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCS 352
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P+F +Y++ + E+ P G + VSA DAD
Sbjct: 390 TARDGGSPS-LWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAMDADA 448
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 449 QENALVSYSLVE 460
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V+D NDN P+FP +Q +L I E + + + ASDAD+G N+ L++ L N FS D
Sbjct: 87 VKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTYG-LSTNEHFSLD 145
Query: 157 L 157
+
Sbjct: 146 V 146
>gi|444729417|gb|ELW69834.1| Cadherin-8, partial [Tupaia chinensis]
Length = 715
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 151 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 210
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG--LF--SSDLRVEWVINR 165
+ V A+D D+G N++ S++ ++ +G LF +SD + + I R
Sbjct: 211 IGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIR 254
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 62 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 121
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 122 VYSILEGQPYFS 133
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVEDQNDNN 104
F NP T L R T +L K GS PL+ T + I V D NDN
Sbjct: 136 FSINPQTGAIVTNAPLDR--ETTSGYLLTVTAKDGGS---PLLSDTTDVEISVTDVNDNA 190
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 191 PVFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFAIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|444705996|gb|ELW47369.1| Cadherin-9 [Tupaia chinensis]
Length = 789
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
+ PE VP+GT + + A D D+G N+++ ++ E +G
Sbjct: 275 FNSPESVPLGTHLGRIKAYDPDVGENAEMEYSVAEGDG 312
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L V K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYVLRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVEDQNDNN 104
F NP T L R T +L K GS PL+ T + I V D NDN
Sbjct: 136 FSINPQTGAIVTNAPLDR--ETTSGYLLTVTAKDGGS---PLLSDTTDVEISVTDVNDNA 190
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 191 PVFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFAIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G +P L T + I V D NDN P
Sbjct: 136 FSINPQTGAIITNAPLDRE-TTSGYLLTV--TAKDGGSPS-LSDTTDVEISVTDVNDNAP 191
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 192 VFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFVIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|363730633|ref|XP_426046.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-18 [Gallus gallus]
Length = 790
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 46 FIANPTTRLYKN-VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
F +P T + + + + R R EH+ V K G L G+ I + D NDN
Sbjct: 208 FSVDPKTGVIRTALHNMDREAR--EHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNP 265
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P FP Y L +PE VG+ V + A+DAD G N+ + + + +G
Sbjct: 266 PRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMKYTIINGDG 312
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI + TT + +L R +T H++ + +N PL I V+D NDN P
Sbjct: 101 FIIDDTTGDIHSTKSLDREQKT--HYVLHAQAIDRRTNK-PLEPESEFIIKVQDINDNAP 157
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
F Y +++PE +GT V V+A+DAD G ++++ ++ L+ FS D
Sbjct: 158 KFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVD 211
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 57 NVGTLKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
N GT+K A R E W + + NPG LV I + D NDN P +Y
Sbjct: 436 NTGTIKTAKIFDREETPWYNITVAASEIDNPG-LVSHVPVGIRILDVNDNPPEL-AREYD 493
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVN 139
+ + E+ G V+Q ++A+D D N
Sbjct: 494 VVVCENAKPGQVIQTITATDKDNSAN 519
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2325 ETKEHFVLMITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNS 140
V +V+ASDAD N+
Sbjct: 2383 VLLVNASDADASTNA 2397
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 1889 FFLNPITGVFN----LTRVLDYEVQQYYILTVRAE--DGGGQFTTIRVYFNILDINDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E++PVG+ V V + +DAD G+NS+L+++
Sbjct: 1943 IFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLAYS 1982
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDTVVGSSVLQVAAADADEGTNADIRY 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ P V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 VFSQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1138
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GS P T + T++ D ND PIF +S YS+++PE++
Sbjct: 2221 KTPTYHLTVQATD-RGSTPRTDTSTVSITLL--DINDFVPIFELSPYSVNVPENLGTLPR 2277
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
T++QVV A D D G NSKLS+ NE L +S +LRV ++R +H
Sbjct: 2278 TILQVV-ARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEH 2329
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETKSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T++++ V GS P PL + + + V D NDN
Sbjct: 2406 SQFTINPSTGQIITSALLDR--ETKDNYTLVVVCSDTGS-PEPLSSSTSVLVTVTDVNDN 2462
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G+ V V+ +DAD+G NS+L ++
Sbjct: 2463 PPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYS 2504
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3176 GYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3231
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D G N ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGENGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP + + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ YS+ I E
Sbjct: 3359 GILDRE-KEERVSLKVL-AKNSGSIRGADIDEVTVNVTVLDANDP-PVFTLNIYSVQISE 3415
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE-------PNGLFS 154
VP+GT V VSA D+D S LSW+ NG FS
Sbjct: 3416 GVPIGTHVTFVSAFDSD----SILSWSRFSYFIGSGNENGAFS 3454
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 665 GSPPQSSMARINVSLL--DINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNPIF + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2134 LSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGI 2193
Query: 147 LEPNGLFSSDLRVEWV 162
+ NG + + R++ V
Sbjct: 2194 V--NGNTNQEFRLDSV 2207
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN+P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 983 TVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGN 1039
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2855 STDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSATDPDEGSNGQVFY 2909
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++ K KG NP PL I V ++N + P F S S +IPE +G++V+
Sbjct: 3053 QNFFITVTAKDKG-NP-PLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGSIVRT 3110
Query: 129 VSASDADLGVNS--KLSWNELEPNGLFS 154
VSA D D +N K S + G+F+
Sbjct: 3111 VSARDRDTAMNGLIKYSISSGNEEGIFA 3138
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
+ P G
Sbjct: 2090 MNPLG 2094
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P V + + D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLRATDGDLGDNGTVRFSLQEAE 626
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQ 127
H++ + KGS P T +I + D+NDN P F SQ +S +PE+ P+G V
Sbjct: 2738 HYVLTIKSSDKGS---PSQSTSVKVMINILDENDNAPRF--SQIFSAHVPENSPLGYTVT 2792
Query: 128 VVSASDADLGVNS 140
V+ SD D+G+N+
Sbjct: 2793 RVTTSDEDIGINA 2805
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI + D NDN P F +Y + ++V VGT +++V + D D
Sbjct: 2954 TSSDRGNPS-LLSETTVTINIVDSNDNAPQFLKIKYFTPVTKNVEVGTKLIKVTAIDDKD 3012
Query: 136 LGVNSKLSWNELEPN--GLFSSDLRVEWV 162
G+NS++ + N G F D W+
Sbjct: 3013 FGLNSEVEYFISNDNHLGKFKLDNDTGWI 3041
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVG-TCNTTIIVEDQNDNN 104
F NP T L R T +L K GS PL+ T + I V D NDN
Sbjct: 136 FSINPQTGAIVTNAPLDR--ETASGYLLTVTAKDGGS---PLLSDTTDVEISVTDVNDNA 190
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 191 PVFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFAIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2325 ETKEHFVLMITATDSGS-PA-LTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNS 140
V +V+ASDAD N+
Sbjct: 2383 VLLVNASDADASTNA 2397
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T + D NDN P
Sbjct: 1889 FFLNPITGVFN----LTRLLDYEVQQYYILTVRAE--DGGGQFTTIRVYFNILDVNDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IF ++ YS S+ E++PVG+ V V + +DAD GVNS+L+++
Sbjct: 1943 IFSLNSYSTSLMENLPVGSTVLVFNVTDADDGVNSQLTYS 1982
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ PG V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
+F Y +++ E+ P G+ V +SA+D D G+N+ L ++ + NGL
Sbjct: 474 VFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGL 520
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V VSA D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYS 1138
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP S+ E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSVVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1294 PLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYS 1353
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ T +GS P T +I++ D ND PIF +S YS+++PE++
Sbjct: 2221 KTPTYHLTVQATD-RGSTP--RTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLGTLPR 2277
Query: 124 TVVQVVSASDADLGVNSKLSWNELEPN--GLFSSDLRVEWVINRSVDQHTNK 173
T++QVV A D D G NSKLS+ N F+ E + +S+D+ T +
Sbjct: 2278 TILQVV-ARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKE 2328
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T++++ V GS P PL + + + V D NDN
Sbjct: 2406 SQFTINPSTGQIITSALLDR--ETKDNYTLVVVCSDAGS-PEPLSSSTSVLVTVTDVNDN 2462
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP G+ V V+ +DAD+G NS+L ++
Sbjct: 2463 PPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYS 2504
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y + ED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVTEDAVVGSSVLQVAAADADEGTNADIRY 287
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3176 GYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3231
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + N +++ D NDN+P+F QY I E+ P G+ + VSA+D DLG N
Sbjct: 665 GSPPQSSMARINVSLL--DINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNG 722
Query: 141 KLSWN 145
+ ++
Sbjct: 723 TVKYS 727
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNPIF + Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2134 LSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGI 2193
Query: 147 LEPNGLFSSDLRVEWV 162
+ NG + + R++ V
Sbjct: 2194 V--NGNTNQEFRIDSV 2207
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T +II+ D NDN P F +S IPE+ P+ TVV A+D D G NS + +
Sbjct: 2031 FTSTAQVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPLG 2094
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN+P+F Y +++ E PV + V ASD D G N ++++ E N
Sbjct: 983 TVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGN 1039
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++ K KG NP PL I V ++N + P F S S +IPE VG++V+
Sbjct: 3053 QNFFITVTAKDKG-NP-PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRT 3110
Query: 129 VSASDADLGVNS--KLSWNELEPNGLFS 154
VSA D D +N K S + G+F+
Sbjct: 3111 VSARDRDAAMNGLIKYSISSGNEEGIFA 3138
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND P+F ++ YS+ I E
Sbjct: 3359 GILDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PVFTLNIYSVQISE 3415
Query: 119 DVPVGTVVQVVSASDAD 135
VP+GT V VSA D+D
Sbjct: 3416 GVPIGTHVTFVSAFDSD 3432
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSWN 145
L+ TI + D NDN P F S+Y + ++V VGT +++V + D D G+NS++ +
Sbjct: 2963 LISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIKVTAIDDKDFGLNSEVEYF 3022
Query: 146 ELEPN--GLFSSDLRVEWV 162
N G F D W+
Sbjct: 3023 ISNDNHLGKFKLDNDTGWI 3041
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ + TI V D NDN P F Y L PE +G+ V V A+D D G N ++ +
Sbjct: 2855 STDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVFAADPDEGSNGQVFY 2909
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQ-YSLSIPEDVPVGTVVQ 127
H++ + KGS P T +I + D+NDN P F SQ +S +PE+ P+G V
Sbjct: 2738 HYVLTIKSSDKGS---PSQSTSVKVMINILDENDNAPRF--SQIFSAHVPENSPLGYTVT 2792
Query: 128 VVSASDADLGVNS 140
V+ SD D+G+N+
Sbjct: 2793 RVTTSDEDIGINA 2805
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSIP 117
G L R L ++ V N + P V + + D ND P+F + Y +S+
Sbjct: 538 GGLDRELASQ----IVLNISARDQGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVV 593
Query: 118 EDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + ++ A+D DLG N + S E E
Sbjct: 594 ENAPTGTELLMLRATDGDLGDNGTVRFSLQEAE 626
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
>gi|332030997|gb|EGI70623.1| Protein dachsous [Acromyrmex echinatior]
Length = 680
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
G+L R +R+ H L +E G P PL N + V+D NDN P+F ++Y ++P
Sbjct: 248 AGSLDREIRSRYH-LVIE--ALDGGTP-PLRSHLNVNVTVQDVNDNPPVFNQTRYDANVP 303
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ VGT V V+A+DAD G N ++ ++
Sbjct: 304 ENATVGTPVLAVNATDADAGDNGRIEYS 331
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVG 123
PL + + V D NDN PIF Y+ ++PE++PVG
Sbjct: 592 PLSSSATVRVTVHDLNDNEPIFEKPLYNATVPENMPVG 629
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
++R L EE + + + + PL ++V D NDN P F +Y + E
Sbjct: 465 VERPLDREEQSVYELSVEATDAGTPPLCAERTFRLLVTDVNDNAPKFEHERYEAHLLEAS 524
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
GT V V A D D GVNS + ++
Sbjct: 525 EPGTSVIQVFAIDLDEGVNSAVRYS 549
>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Xenopus (Silurana) tropicalis]
Length = 2766
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P + + + +G + R + L VE +G +PGP T I ++D+NDN P
Sbjct: 254 FEIDPRSGVIRILGPVDRE-EIASYQLVVE-ANDQGHDPGPRSSTATVHITIQDENDNAP 311
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN--GLFSSD 156
F +Y + ED + + + VV+A+D D G N+ + ++ L N GLFS D
Sbjct: 312 QFSEKRYVARVSEDSSIESQLLVVTATDCDQGANAAVHYSILSGNSRGLFSID 364
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
T + V D N + P+F S Y++S+ ED P GT V V+SA+D D G N+++++
Sbjct: 608 TARAIVNVTDANTHRPVFQSSHYTVSVKEDQPAGTTVVVISATDEDTGENARIAY 662
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I+V D NDN P+F + Y S+PED P T V VSA+D D G+N ++ +
Sbjct: 716 ILVIDVNDNPPVFQRASYKGSVPEDSPPYTSVLQVSATDRDSGLNGRIFY 765
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNN 104
F +P T GTL E+ L+V G P PL II V D NDN
Sbjct: 361 FSIDPLTGAIFLAGTLDFE-TGREYTLRVR--AQDGGRP-PLSNVTGLVIIQVLDVNDNA 416
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P F + S+ E+ P+G V V A DAD G N++L + G FS + W++
Sbjct: 417 PNFVSGPFQASVLENAPIGYSVLQVQALDADSGDNARLDYCLSGTTGPFSINNSTGWIM 475
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
+ V D NDN P+F + + + E+ P+G + ++A+D D G N+++ + +E N
Sbjct: 823 VTVLDVNDNAPVFAREELEVKVFENSPLGPPLARITATDPDEGPNAQIMYQIVEGN 878
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S + F + T + G L R ++ H +V T G P T+ V D N
Sbjct: 146 SASYFSLDSNTGVVTTSGELDRETKST-HVFRV--TVRDGGIPS-RTAMATLTVTVSDTN 201
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
D++P F +Y ++ E++ VG V V A+D D N+ +++
Sbjct: 202 DHDPNFEQQEYRETVRENMEVGYEVMTVRATDGDSLGNANIAY 244
>gi|149017284|gb|EDL76335.1| rCG49457 [Rattus norvegicus]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R E +++ T G P L GT I V D NDN P F S Y++ +PE+
Sbjct: 196 LRKPLDREEAAEMRLLLTATDGGKP-ELTGTVQLLITVLDVNDNAPAFDRSLYTVKLPEN 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
VP GT+V V+ASD D GVN ++ ++ FSSD+
Sbjct: 255 VPNGTLVIKVNASDLDEGVNGEVMYS-------FSSDV 285
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSAS 132
+V T G +P L T ++ V D NDN P+F +Y++ + E+ P GT + VSA
Sbjct: 422 QVVVTAQDGGSPS-LRATATVSVEVADVNDNAPLFAQPEYTVFVKENNPPGTHIFTVSAV 480
Query: 133 DADLGVNSKLSWNELE 148
DAD N+ +S++ +E
Sbjct: 481 DADAQENALVSYSLVE 496
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL+G C + V D NDN P V L + ED +G ++ ++S D D G N +++ +
Sbjct: 329 PLIGHCTVLVEVVDANDNAPQLNVKTLWLPVKEDAQLGKIIALISVIDLDSGANGQVTCS 388
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
V D NDN P FP +Q +L IPE + + + ASDAD+G N+ L++ L N FS D
Sbjct: 123 VRDINDNPPTFPATQKTLFIPESRLLDSRFPLEGASDADVGSNALLTY-RLSTNEHFSLD 181
Query: 157 L 157
+
Sbjct: 182 V 182
>gi|395510871|ref|XP_003759691.1| PREDICTED: cadherin-10 [Sarcophilus harrisii]
Length = 788
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P F + L +PE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFSQNTIHLRVPESSPVGTAIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V A+DAD G N+++ + ++ +G
Sbjct: 291 VKATDADTGKNAEIEYRIIDGDG 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 363 GPFKDTTIVKISVEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 412
>gi|390459329|ref|XP_003732277.1| PREDICTED: protocadherin beta-14-like [Callithrix jacchus]
Length = 798
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 61 LKRALRTEEHW-LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L RAL EE L++ T G +P P GT I V D NDN P FP S Y + +PED
Sbjct: 196 LDRALDYEEEAELRLTLTALDGGSP-PRSGTTLVLIKVLDINDNAPEFPQSLYEVQVPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVIN 164
P+G+ + +SA D D G K+S+ S D+R + IN
Sbjct: 255 RPLGSWIVTISAKDLDTGNYGKISYTFSHA----SEDIRKTFEIN 295
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
N T++V D NDN P F + Y L + E+ + VSA+D D G N++++++ L P
Sbjct: 436 NITVLVSDVNDNAPAFTQTSYILFVRENNSPALHIGTVSATDRDSGTNAQVTYSLLPPQ 494
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF--- 153
V+D ND++P F ++ + I E VGT + SA D D+G NS ++ + PN F
Sbjct: 123 VKDINDHSPTFLDNEILIKISEGTTVGTTFLLESARDLDVGSNSLQNYT-ISPNSHFYIK 181
Query: 154 ---SSDLRV--EWVINRSVD 168
S D ++ E V++R++D
Sbjct: 182 IPDSGDRKIYPELVLDRALD 201
>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
caballus]
Length = 4351
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 51 TTRLYKNVGTLK--RALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
T L +N G LK +A+ E W +++ H N LV + I V+D NDN PIF
Sbjct: 2740 TFSLDRNTGVLKVRKAMDYESTKWYQIDLMAHCPHNDTYLVSLVSVNIQVKDVNDNRPIF 2799
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNG----LFSSDLRVEWV 162
Y + E++PVGT V V+A+D D G + ++S+ ++P LF+ D W+
Sbjct: 2800 EADPYKAVLTENMPVGTTVIQVTANDQDTGNDGQVSYRLPVDPGSNIHELFAIDSETGWI 2859
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVE--NTKHKGSNPGPLVGTCNTTIIVEDQND 102
KF +P T G L R ++ LKVE + KG L + TI +ED ND
Sbjct: 865 KFSLHPLTGELVVTGHLDRE-SEPQYILKVEARDQPRKGHQ---LFSVTDLTITLEDAND 920
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL-EPNGLFSSD 156
N+P + +SL +PED+P GTV+ + A D DLG ++ + L + G F D
Sbjct: 921 NSPQCIMELHSLKVPEDLPPGTVLTFLDAYDPDLGPAGEVQYTLLDDARGTFHVD 975
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V+D NDN P FP Y ++I ED +GT + + A DAD N ++ + L P F
Sbjct: 807 TVNVKDWNDNAPRFPPGGYQVTISEDTEIGTTIAELKAKDADSEDNGRVRYTLLSPTDKF 866
Query: 154 S-SDLRVEWVINRSVDQHT 171
S L E V+ +D+ +
Sbjct: 867 SLHPLTGELVVTGHLDRES 885
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
KF NP+ ++ T + L E +V K + G V C II+ D+NDN
Sbjct: 2528 KFSINPSGQI-----TTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKIILTDENDNP 2582
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F S+Y++S+ +V + V V A DAD G N+ ++++
Sbjct: 2583 PQFKASEYTVSVQSNVSKDSPVIQVLAYDADEGRNADVTYS 2623
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
DQND P+F Y ++I ED+P+ + + V+A+DADLG N++ +
Sbjct: 140 DQNDLKPLFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYY 185
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 89 GTCNTTIIVE--DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
G +TT++V+ D N++ PIF S Y + E++P GT V V+A+D D G N ++++
Sbjct: 438 GLASTTVVVDIVDCNNHAPIFNRSSYEGTFDENIPPGTSVLTVTATDRDHGENGYVTYSI 497
Query: 147 LEPNGL-FSSD 156
P + FS D
Sbjct: 498 ARPKSVPFSID 508
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
++VED NDN P F S Y+ SI E +P T V + A D D G N +S+ +E
Sbjct: 2260 VLVEDINDNPPTFSQSVYTTSISEGLPAQTPVIQLLAFDQDSGQNRDVSYQIVE 2313
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ +P T L L R + +EH L+V T P L T + + D NDN P
Sbjct: 1185 FVVHPLTGLLSTARQLDRENK-DEHILEV--TVQDNGEPS-LRSTSRVVVRILDVNDNPP 1240
Query: 106 IFPVSQYSLSIPEDVPVGT--VVQVVSASDADLGVNSKLSWN 145
+F +++ +PE + GT V + ASD D G+N +++++
Sbjct: 1241 VFSHKLFNVRLPERLSPGTPGPVYRLVASDLDEGLNGRVTYS 1282
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
K ++ G + T+ VED NDN P F S ++++ ++ V T V VV A D D G N
Sbjct: 3088 KATDGGGQSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVLARDPDQGTN 3147
Query: 140 SKLSWN 145
+++ ++
Sbjct: 3148 AQVVYS 3153
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
+ V+D NDN+P F Y I + G V+ VSA+D DLGVN +++ E F
Sbjct: 2058 VFVQDVNDNHPEFKHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAFAEDYTYFR 2117
Query: 155 SD 156
D
Sbjct: 2118 MD 2119
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 53 RLYKNVGTL--KRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVE--DQNDNNP 105
RL G L R+L E +++L +E ++ S+ + TTI+V D N++ P
Sbjct: 3267 RLDPRTGILYVNRSLDFETNPKYFLSIECSRKGSSSLSDM-----TTIVVNITDTNEHRP 3321
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
F YS + E+ VG +V VSA+D D VNS ++++ + N L
Sbjct: 3322 RFLQDLYSTRVLENAVVGDLVLTVSATDEDGPVNSAITYSLVGGNQL 3368
>gi|348558978|ref|XP_003465293.1| PREDICTED: protocadherin-16-like [Cavia porcellus]
Length = 3297
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2350 AHDGPHEGRANLTVLVEDVNDNAPTFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2409
Query: 142 LSWNELEPNGLFSSD 156
+S+ P FS D
Sbjct: 2410 ISYYLASPAEGFSVD 2424
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1807 GTMRPLDREVEPAFQLRIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1865
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N +++
Sbjct: 1866 DAPAGTLLIQLQAHDPDAGANGHVTY 1891
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED+PVG + V ASDAD G + + +
Sbjct: 2580 PRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFT 2639
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2640 LSSGDPLGLFELD 2652
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 47 IANPTTRLYKNVGTLK--RALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
I+ L N G L RAL EE + PL+ + +ED+ND+
Sbjct: 1688 ISGENFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHA 1747
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSDL 157
P F +Q SL +PE T+ ++ ASD D+G N +L + + +P+G F DL
Sbjct: 1748 PAFGNAQLSLEVPEGQDPQTLT-ILRASDPDVGANGQLQYRIVDGDPSGAFVLDL 1801
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 867 GSGVPPAFAVTRVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 926
Query: 141 KLSWNELE-PNGLFSSD 156
++++ L +G F+ D
Sbjct: 927 RVTFTLLAGGDGAFTVD 943
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ + D ND P F
Sbjct: 1592 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--STQLLTVSIVDVNDEAPTF 1648
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-------ELEPNGLFSSDLR 158
+YS+ + E+ P GT + + A+D DLG N ++++ L+PN + LR
Sbjct: 1649 QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGENFSLDPNTGVLTTLR 1706
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PL + ++ ++D NDN P
Sbjct: 520 FSIDPTSGIITTAASLDYELEPQPQVIVVAT---DGGLP-PLASSATVSVALQDVNDNEP 575
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 576 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 615
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
T+ V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2692 TVEVQDVNDHGPAFPLNILSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLE 2746
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P+T L R + E + + + S LVG+ T++V D NDN P
Sbjct: 2219 FHVDPSTGTITTTAILDREIWAETRLVLMATDRGSPS----LVGSATLTVMVIDTNDNRP 2274
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
P + L + ED +G+ + V+ +D D G + W L P+G
Sbjct: 2275 TIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYVLSPSG 2316
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 662 GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSY 721
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 722 HILAGNSPPLFALDEHSGLLTVAWPLARRAN 752
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2471 LQDQNDHTPSFTLPHYRVAVSEDLPPGSTLLTLEATDAD 2509
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1933 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLRAEDRDA 1992
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1993 GANASI 1998
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 50 PTTRLYKNVGTLK--RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
P RL G L R L E L VE T + + + V D+NDN+
Sbjct: 1483 PALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRAARVSVRVFVTDENDNS 1542
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P+F S + +PED P G V + A D DLG +++S+
Sbjct: 1543 PVF-TSPSRVRLPEDQPPGPVALHLVARDPDLGEAARVSY 1581
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + I V D NDN+P
Sbjct: 1153 FRIHPQTGEVTTLQTLDREQQSSFQLLV--QVQDGGSPPRSTTGTVH--IAVLDLNDNSP 1208
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1209 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1264
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
P T T+ V D ND+ P FP ++ +L IPE +GT + A DAD
Sbjct: 121 PDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLDPARDAD 170
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LK+ + G T + + +QND++P L++ E+ P GT V
Sbjct: 1065 ELYTLKIMAVSGSKTELGQQTSTATVRVSILNQNDHSPRLSEEPTFLAVTENQPPGTSVG 1124
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1125 RVFATDRDSGPNGRLTYS 1142
>gi|345328639|ref|XP_001507105.2| PREDICTED: protocadherin alpha-C2 [Ornithorhynchus anatinus]
Length = 1009
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ L R + W ++ T G NP L GT T+ V D NDN+P F S Y + + ED
Sbjct: 215 LRKGLDRERDAWHRLVLTAVDGGNPA-LSGTAQITVRVLDTNDNSPAFGQSTYRVQLRED 273
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
P GT+ ++ASD D G N +L ++
Sbjct: 274 APPGTLAVKLNASDPDEGSNGQLGYS 299
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 83 NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL 142
P P+ G C + + D NDN P ++ +PED P TVV ++S +D D G+N ++
Sbjct: 345 GPVPMAGHCKVLVDIVDVNDNAPEVVLTALYSPVPEDAPADTVVALLSVNDQDSGLNQQV 404
Query: 143 SWN 145
S +
Sbjct: 405 SLS 407
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + D NDN P FP + YS+ +PE+ G ++ V A+D D N++++++
Sbjct: 452 PLSSQRTLRVDISDVNDNPPRFPRAVYSIYVPENNTPGGLLGTVRATDPDARENAEVTYS 511
Query: 146 EL 147
L
Sbjct: 512 LL 513
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
D ND+ P FP Y L + E G + A D D+G N+ S+ L P+ F+ DL+
Sbjct: 144 DINDHAPRFPRPDYRLQVSESAVPGARFHIEGAQDPDVGSNAVQSY-RLSPSEHFALDLK 202
Query: 159 --------VEWVINRSVDQHTN 172
+E V+ + +D+ +
Sbjct: 203 PPQEDSKVLELVLRKGLDRERD 224
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NEL 147
T I + D N+ PIF + YS S+ ED PVGT V VVSA+D+D+G+N+++++ NE
Sbjct: 66 TATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEE 125
Query: 148 EPNGLFSSD 156
NGL S D
Sbjct: 126 SINGLGSPD 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T L R T + L V T G +P L T + I V D NDN P
Sbjct: 136 FSINPQTGAIVTNAPLDRE-TTSGYLLTV--TAKDGGSPS-LSDTTDVEISVTDVNDNAP 191
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+F Y SI ED VGT V VSASD D+G+N ++ +
Sbjct: 192 VFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKY 230
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
F+ +PT+ + L R H + KGS PL + I +ED ND+
Sbjct: 240 GSFVIDPTSGTVRTNKGLDRESVAVYHLTAI--AVDKGS--PPLSSSVEVQIRLEDVNDS 295
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + +L +PE+ PVG+VV + A D D GVN+ + ++
Sbjct: 296 PPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYS 337
>gi|410932249|ref|XP_003979506.1| PREDICTED: protocadherin gamma-A11-like [Takifugu rubripes]
Length = 856
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R +E + + G NP GT I V D NDN P+F + Y +PE+ +GTV
Sbjct: 291 REKEQNVNLVMVAVDGGNP-QRSGTATIQITVLDANDNAPVFEQAVYKADLPENAALGTV 349
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSASDAD GVN ++++
Sbjct: 350 VLTVSASDADEGVNGEVTY 368
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
+++++D NDN+P+FP L I E G +V A DAD+G N + LE N F
Sbjct: 209 SLLIQDVNDNSPVFPKDVIKLEIRESADKGARYRVNDAHDADIGHNVVKDYI-LEKNNHF 267
Query: 154 SSDLR--------VEWVINRSVDQHTNK 173
+R VE V+++ +D+ +
Sbjct: 268 VLSVRDDVEGSKSVELVLDKELDREKEQ 295
>gi|345328656|ref|XP_003431291.1| PREDICTED: protocadherin gamma-A12-like [Ornithorhynchus anatinus]
Length = 812
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+R L EE H L + T G +P GT +IV D NDN P+F S Y + +
Sbjct: 196 LERVLDREEKAIHHLVL--TASDGGDP-IRTGTARIRVIVLDANDNAPVFTQSVYQVKVR 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
ED PVGT V ++A+DAD G+N+++ ++
Sbjct: 253 EDAPVGTRVVTINATDADEGLNAEVIYS 280
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 76 NTKHKGSNPG--PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASD 133
N K ++ G PL + + V D NDN P F + YS+ +PE+ P G V V A D
Sbjct: 419 NVTVKATDRGSPPLSAHTHIFLHVSDTNDNPPAFEQAAYSVYVPENNPRGASVFRVIAWD 478
Query: 134 ADLGVNSKLSWNELEPNG 151
D N++++++ E G
Sbjct: 479 PDSDENAQITYSISEGPG 496
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLR 158
D NDN P F + + I E G + A D D+G NS S+ +L PN FS D++
Sbjct: 125 DVNDNAPRFKGEEILVKIIESATSGMRFPLPEAHDPDVGTNSLQSY-QLSPNRHFSLDVQ 183
Query: 159 --------VEWVINRSVDQH 170
VE V+ R +D+
Sbjct: 184 SGADGTKNVELVLERVLDRE 203
>gi|345308717|ref|XP_001521137.2| PREDICTED: hypothetical protein LOC100092558 [Ornithorhynchus
anatinus]
Length = 1660
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 LKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L+R L R EE L + T G +P GT + +IV D NDN P+F Y + + ED
Sbjct: 196 LERVLDREEEAVLHLVLTASDGGDP-VRSGTAHIHVIVLDINDNAPVFTQPVYQVRVRED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN 145
VPVGT + V+A+D D G NS+++++
Sbjct: 255 VPVGTRILRVNATDPDEGTNSEVTYS 280
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 37 PAFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII 96
P F+ + K +P Y + K R E+ + + T G +P GT I
Sbjct: 962 PHFSLEVRK---SPGGSKYPELVLEKLLDREEKSFHHLVLTAVDGGDP-VRSGTTQIRIN 1017
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
V D NDN P+F Y +S+ E +P G+ V V ASD D GVN++++++
Sbjct: 1018 VTDANDNPPVFSQEVYKISLRESLPQGSSVLRVEASDRDEGVNAQITFS 1066
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 47 IANPTTRLYK--NVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
IA+ + YK G L R +T E+ + V T NP PL + +++V D NDN
Sbjct: 1180 IASSSKNSYKLITAGVLDRE-QTAEYNITV--TARDRGNP-PLTTSKTISLLVADVNDNP 1235
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
P+F + Y +PE+ G + V+ASD DL N+++S++ L+
Sbjct: 1236 PVFSQTTYLAYVPENNRPGASIYRVTASDRDLDSNARISYSLLD 1279
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S+ G L+ C I + D+NDN P + S S+PED GTV+ ++ D D G N
Sbjct: 1106 EASDGGGLMAQCKVVIEILDENDNAPEVTFASSSSSLPEDSEPGTVIALIRIRDRDSGDN 1165
Query: 140 SKLSWN 145
+++
Sbjct: 1166 GEVTCQ 1171
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P F + YS+ IPE+ P G + V+A D D NS+++++
Sbjct: 431 PLSFNIHISLHVSDTNDNPPSFQQTAYSVYIPENNPRGASIFRVTARDPDSEENSRVTYS 490
Query: 146 ELEPNG 151
E G
Sbjct: 491 ISEEPG 496
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +IVED NDN P V+ + S+ ED P GTV+ +++ D D G N
Sbjct: 327 FLAKAKVQVIVEDVNDNAPEVVVTSLTGSVREDSPPGTVIALLNVHDRDSGDN 379
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
+ D NDN P F + + I E+ G + A D D+G NS S+ +L PN FS D
Sbjct: 123 IGDINDNAPRFTEEELEVKISENAAPGMRFPLPEAHDPDVGTNSLQSY-QLSPNRHFSLD 181
Query: 157 LR--------VEWVINRSVDQH 170
++ E V+ R +D+
Sbjct: 182 VQSGVDGTKIAELVLERVLDRE 203
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I ++D NDN P+F L I E G + SA D D+G+NS + +L PN FS
Sbjct: 907 ITIQDINDNAPLFKKIYIDLKINEFALRGARFGLESALDPDVGINSVDKY-QLSPNPHFS 965
Query: 155 SDLR 158
++R
Sbjct: 966 LEVR 969
>gi|334311067|ref|XP_003339575.1| PREDICTED: protocadherin alpha-8 [Monodelphis domestica]
Length = 841
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
KF NP T +++R L E+ + +V+ T KG NP P+VG C + VED N
Sbjct: 292 KFQINPDTGEI----SIQRYLDFEDINSYKFRVDATD-KG-NP-PMVGHCTIRVDVEDTN 344
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
DN P V+ SL + ED P GTV+ ++S SD D G N
Sbjct: 345 DNAPELSVTSLSLPVREDAPPGTVIALISVSDRDSGAN 382
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L++ L EE H L + T G P L GT I V D NDN P F S+Y + I
Sbjct: 196 LRKPLDREEVPEHHLIL--TVTDGGKP-ELTGTVQLLITVLDVNDNAPTFERSEYEVKIL 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKL--SWNEL 147
E+ GT+V ++ASDAD G+N ++ S+N L
Sbjct: 253 ENAARGTLVIQLNASDADEGINGEIVYSFNSL 284
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L + + + + D NDN P F + Y+L + E+ P G+ + VSASD D
Sbjct: 426 TARDGGSPA-LWTSASVMVGIADVNDNAPAFEQTSYTLFVKENNPPGSHIFTVSASDPDA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 EENALVSYSLVE 496
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
++D NDN P+FPV + L I E + + ASD D+G N+ L+++ L N F D
Sbjct: 123 IKDINDNPPVFPVKEQKLFIYESRLPDSRFPLEGASDPDIGTNALLTYS-LSTNDYFILD 181
Query: 157 LR--------VEWVINRSVDQH 170
++ VE V+ + +D+
Sbjct: 182 VKSKNEQDKLVELVLRKPLDRE 203
>gi|119582402|gb|EAW61998.1| hCG1982192, isoform CRA_m [Homo sapiens]
Length = 798
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN
Sbjct: 329 PLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVN 382
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 41 FSIAKFIANPTTRLYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
FS+ K P L K +G L+++L R E + + T G P L GT I V
Sbjct: 178 FSLEK---PPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP-ELTGTVQLLITVL 233
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
D NDN P F + Y + + E+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 234 DANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 288
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 179
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
>gi|344238297|gb|EGV94400.1| Protocadherin beta-6 [Cricetulus griseus]
Length = 2168
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 61 LKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L +AL EE L++ T G +P P GT I+V D NDN P F Y + +PE+
Sbjct: 182 LDKALDHEEQAQLRLTLTALDGGSP-PRSGTTEIQILVLDINDNTPEFSQELYEVQVPEN 240
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
PVGT++ VSASD D G ++S+ LF D
Sbjct: 241 NPVGTLLITVSASDLDTGTFGEVSY------ALFQDD 271
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Query: 95 IIVEDQNDNNP--IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
++V D NDN P ++P+ Q ++ IPED P+G+++ VSA+D D+GVN ++S++
Sbjct: 1330 VLVLDANDNAPFVLYPL-QNAVQIPEDSPIGSLITTVSATDKDIGVNGQISYS 1381
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R E + T G +P P GT I+V D NDN+P F S Y + E+ PVG++
Sbjct: 983 REELAEFTLTLTALDGGSP-PRSGTALVRILVLDINDNSPEFVQSLYKVQSYENTPVGSL 1041
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSA D D G ++ +
Sbjct: 1042 VVAVSARDLDTGSYGQIVY 1060
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 86 PLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
P++ T N T+ V D NDN P F + Y+L + E+ + +SA+D+D G N+ +++
Sbjct: 1530 PMLRTQVNVTVEVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITY 1589
Query: 145 NEL 147
+ L
Sbjct: 1590 SLL 1592
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+T+ + + +E + G G C I V D ND+ P +S ++ I E++P T+
Sbjct: 1412 KTQSYEVNIE-----ARDAGTFSGKCTILIQVVDVNDHAPEIVLSAFNNPISENLP-ETM 1465
Query: 126 VQVVSASDADLGVNSKLSW 144
V V S SD D G N K++
Sbjct: 1466 VAVFSVSDLDSGENGKITC 1484
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
T+ V D NDN+P F + Y+L + E+ + +SA+D+D G N+ ++++ L
Sbjct: 1815 TVQVSDVNDNSPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSLL 1868
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L G C+ + V D NDN P +S + IPE++P TV V S SDAD N +++
Sbjct: 310 GGLTGKCSLVVQVLDVNDNAPEVILSSLNSPIPENLPDITVA-VFSFSDADSENNQEVTC 368
Query: 145 N-----------------ELEPNGLFSSDLRVEWVINRSVD 168
+ LE +G + R E+ I +V+
Sbjct: 369 SIDDNLPFLLRPSTENFYTLETDGALDRESRAEYNITITVN 409
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 46 FIANPTTRLYKNV---GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNT-TIIVEDQN 101
F+ P+T + + G L R R E + N P + T +T T+ V D N
Sbjct: 376 FLLRPSTENFYTLETDGALDRESRAEYNITITVNDLGT-----PRLTTQHTITVQVSDVN 430
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
DN P F + Y+L + E+ + +SA+D+D G N+ ++++ L
Sbjct: 431 DNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSLL 476
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
T+ V D NDN P F + Y+L + E+ + +SA+D+D G N+ ++++ L
Sbjct: 1219 TVQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSLL 1272
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
T+ V D NDN P F + Y+L + E+ + +SA+D+D G N+ ++++ L
Sbjct: 585 TVRVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSLL 638
>gi|291244990|ref|XP_002742376.1| PREDICTED: hedgling-like, partial [Saccoglossus kowalevskii]
Length = 3129
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R + T+++ L++ T + PL GT +I VED NDN PIF Y+ SI E++
Sbjct: 2530 LDREI-TDQYILEITATDGGDT---PLTGTVTLSITVEDVNDNTPIFSQDIYTTSILENI 2585
Query: 121 PVGTVVQVVSASDADLGVNSKLSWN 145
+GT V V A+D D G NS + +N
Sbjct: 2586 NIGTSVFTVIATDIDSGANSNIEYN 2610
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
IIVED+NDN PIF +YS++I ED V + V A+DAD G N++L+++
Sbjct: 2983 IIVEDENDNYPIFNEDEYSVTIAEDHDVNAYILTVDATDADNGTNAELTYS 3033
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL TI + D NDN P F S L + E+VP+ T+V + A+D DLG N +++
Sbjct: 2869 PLFAQTTFTITIADINDNVPQFAQSVLKLYVAENVPLSTLVDTLLATDPDLGDNGLVNY 2927
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF--PVSQYSLSIPE 118
L R ++ H L N G+ P L T TI++ D+NDN+P+ P S Y +I E
Sbjct: 2743 LDREVQDTYHLLV--NASDLGT-PS-LASTSTVTIVIVDENDNSPVIVNPGS-YDTTISE 2797
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN 145
D VGT V + A+D D N +L+++
Sbjct: 2798 DQHVGTSVLTIIATDDDANENGQLTYD 2824
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG 137
+GS PGP T + T+ + D+NDN P F + YSL+I E + TV+ + +D D
Sbjct: 1401 ADQGS-PGPSSTTRSLTVDISDENDNAPYFDQNYYSLTITEGDVIDTVITTFNVNDDDSA 1459
Query: 138 VNSKLSWNELEPNGL 152
+ +S+ N L
Sbjct: 1460 AITTISYQFYSGNDL 1474
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
II+ED+NDN P Y +SI E+ GT V + D+D G N +++
Sbjct: 2351 IIIEDENDNTPTCDPQPYVVSISENESTGTTVTTLVIQDSDSGTNGEVA 2399
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 74 VENTKHKGSNPGPLVGT-CNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSAS 132
V N +GS P + T C T+ V +N+ P+F + ++ I E + +G+V+ A+
Sbjct: 2435 VFNVTDRGS---PSLSTNCAVTVNVLPENNYTPVFGIDPDNIVISESLEIGSVIYTAIAT 2491
Query: 133 DAD-LGVNSKLSWNELEPNG-------LFSSDLRVEWVINRSV-DQH 170
D D +G + K+++N E N L+S D+ + +++R + DQ+
Sbjct: 2492 DEDAIGSDGKVTYNITEGNSEEKFTVDLYSGDVLTKSLLDREITDQY 2538
>gi|1377894|dbj|BAA04798.1| OB-cadherin-1 [Homo sapiens]
Length = 796
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + V K G + G L GT TI + D ND
Sbjct: 204 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVND 263
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWV 162
N P FP S Y +S+ E G V V A D D+G N +++N ++ +G+ S ++ ++
Sbjct: 264 NPPKFPQSVYQISVSEAAVPGEEVGRVKAKDPDIGENGLVTYNIVDGDGMESFEITTDYE 323
Query: 163 INRSV 167
V
Sbjct: 324 TQEGV 328
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL + V+D NDN P F Y ++PE VGT V V+ASDAD G ++KL
Sbjct: 138 PLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADDPTYGNSAKL 197
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 198 VYSILEGQPYFS 209
>gi|281345413|gb|EFB20997.1| hypothetical protein PANDA_000354 [Ailuropoda melanoleuca]
Length = 2272
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
L+RAL E+ H L + G NP C +IV D NDN P+F +Y +S+P
Sbjct: 196 LERALDREQKKVHQLVL--IASDGGNPVRSGNLC-IQVIVLDANDNPPVFTQPEYQVSVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E++PVGT + V+A+D D G N+++S+
Sbjct: 253 ENLPVGTTLLTVNATDPDEGFNAQVSY 279
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R H L + T G +P PL GT I V D NDN P+F Y +S+ E+VP GT
Sbjct: 926 RQSSHQLIL--TAMDGGDP-PLSGTTQIRIQVTDANDNAPVFRQDTYKVSLQENVPSGTS 982
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A+D D GVN+++++
Sbjct: 983 VLQVMATDQDEGVNAEITY 1001
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW-- 144
L + + T+ + D NDN P+F + Y + + E+ P G + VSA D DLG N ++S+
Sbjct: 1154 LFSSTSITLHISDINDNVPVFHQASYVVHVAENNPPGASIAQVSAFDPDLGHNGRVSYSI 1213
Query: 145 --NELEPNGLFS 154
++LEP L S
Sbjct: 1214 VASDLEPRALAS 1225
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
GT + + D NDN P+F +Y + + E+VPVG + V A+D D G N +++++
Sbjct: 1783 GTVKIHVTLVDTNDNAPVFTQPEYRVKVLENVPVGYRLLAVKATDPDEGANGEVTYS 1839
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130
+ ++ H G PG + ++ V D NDN P FP + YS IPE+ P G + +S
Sbjct: 1873 FYDIDVEAHDG--PGLRARKTHISLQVADINDNPPAFPHASYSAYIPENNPRGASILSIS 1930
Query: 131 ASDADLGVNSKLSWNELE 148
A D D N++++++ E
Sbjct: 1931 AQDPDSIENARVTYSLAE 1948
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T GTL +T + L VE + G CN I + D+NDN P
Sbjct: 1014 FNLNPNTGDITTNGTLDFE-KTSRYMLVVE-----ARDGGMHTAHCNVQIEIVDENDNAP 1067
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ S IPED +GTVV + D D G N
Sbjct: 1068 EVMLMSSSNQIPEDSNLGTVVALFKVRDRDSGQN 1101
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G NP PL + + T+ V D NDN P F S YS + E+ P G + V+A D D N+
Sbjct: 427 GGNP-PLSTSTHITLYVADINDNPPAFSQSSYSAYVSENNPRGASIFCVTAQDPDSISNA 485
Query: 141 KLSW 144
+++
Sbjct: 486 HITY 489
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 95 IIVEDQNDNNP--IFPV-----SQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL 147
++V+D+NDN P ++P S ++P G +V V A DAD G N+ LS++ L
Sbjct: 1272 VLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVL 1331
Query: 148 EPN--GLFSSDLRVEWV 162
+ + GLFS LR V
Sbjct: 1332 QASEPGLFSLGLRTGEV 1348
>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
Length = 3293
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E +++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1803 GTMRPLDREVEPAFQMKIEARDGGQPA-LSATLLVTVTVLDANDHAPAFPVPAYSVEVPE 1861
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
D P GT++ + A D D G N +++
Sbjct: 1862 DAPAGTLLLQLQAHDPDAGANGHVTY 1887
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSK 141
++ GP G N T++VED NDN P F S Y + + E P G+ + VSA+D D G N
Sbjct: 2346 AHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGH 2405
Query: 142 LSWNELEPNGLFSSD 156
+S++ FS D
Sbjct: 2406 ISYHLASSAEGFSVD 2420
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLS 143
P T+ V D NDN P+F + Y +++PED PVG + V ASDAD G + + +
Sbjct: 2576 PRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFT 2635
Query: 144 WNELEPNGLFSSD 156
+ +P GLF D
Sbjct: 2636 LSSGDPLGLFELD 2648
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 45 KFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNN 104
+F +P T + + TL+ R EE + + G +P PL+ + VED+ND+
Sbjct: 1688 RFSLDPDTGV---LTTLQALDREEEEEINLTVYARDGGSP-PLLTHVTVRVAVEDENDHA 1743
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
P F + SL +PE ++ + ASD D+G N +L + L +P+G F DL
Sbjct: 1744 PTFGSAHLSLEVPEGQD-PQILTTLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1797
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R+L E EH L V + H GS P T TI V D ND P F
Sbjct: 1588 RLHSSTGALSVVRSLDREQRAEHVLTVVASDH-GSPPRS--ATQLLTISVADINDEAPAF 1644
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D+DLG N ++++
Sbjct: 1645 QQQEYSVLLRENSPPGTSLLTLRATDSDLGANGQVTY 1681
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND++P FP+S S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2688 TIEVQDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2742
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P GT++ + A D D GVNS
Sbjct: 863 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPSTAPGTLIYTLRALDPDSGVNS 922
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 923 RVTFTLLAGGG 933
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + + V G P PLV + ++ ++D NDN P
Sbjct: 516 FSIDPTSGIITTAASLDYELEPQPQLIVVAT---DGGLP-PLVSSATVSVALQDVNDNEP 571
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 572 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 611
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2252 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2307
Query: 147 LEPNG 151
L P+G
Sbjct: 2308 LSPSG 2312
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + V D+NDN P F +Y+ S+ GT V V A D D G + +LS+
Sbjct: 658 GGLKSMVYVKVFVSDENDNRPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY 717
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 718 HILAGNSPPLFALDEHSGLLTVAWPLARRAN 748
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 65 LRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT 124
+RT + + +++ + P T T+ V D ND+ P FP ++ +L IPE +GT
Sbjct: 96 VRTARVLDREQRDRYRFTAVTPDGATVEVTVRVADINDHAPAFPQARAALQIPEHTALGT 155
Query: 125 VVQVVSASDADLG 137
+ A DAD G
Sbjct: 156 CYPLEPARDADAG 168
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1929 GAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLPLATLRAEDRDA 1988
Query: 137 GVNSKL 142
G N+ +
Sbjct: 1989 GANASI 1994
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R R + L V+ + GS P GT + I V D NDN+P
Sbjct: 1149 FRIHPQTGEVTTLQTLDRE-RQSSYQLLVQ-VQDAGSPPRSTTGTVH--IAVLDLNDNSP 1204
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1205 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1260
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT I + +QND++P L++ E+ P GT V
Sbjct: 1061 ELYTLKVMAVSGSKAELGQQTGTATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVG 1120
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1121 RVFATDRDSGPNGRLTYS 1138
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F + Y +++ ED+P G+ + + A+DAD
Sbjct: 2467 LQDQNDHAPSFTLPHYRVAVAEDLPPGSTLLTLEATDAD 2505
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1531 VTDENDNAPVF-ASPSHVRLPEDQPTGPTALHVVARDPDLGEAARVSY 1577
Score = 39.3 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R R+ H++ GS P + T++ D ND+ P F S+Y + E
Sbjct: 206 GELDRENRS--HYMLQLEAYDGGSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSE 261
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWN----ELEPNGLFSSD 156
+ G+ V V ASDAD G N +++ + E +G FS D
Sbjct: 262 SLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSID 303
>gi|14196457|ref|NP_115265.1| protocadherin gamma-A12 isoform 2 precursor [Homo sapiens]
gi|5457061|gb|AAD43767.1|AF152506_1 protocadherin gamma A12 short form protein [Homo sapiens]
gi|119582349|gb|EAW61945.1| hCG1982215, isoform CRA_x [Homo sapiens]
Length = 820
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LKRAL EE H L + T G +P GT ++V D NDN P F +Y S+P
Sbjct: 196 LKRALDREEKAAHHLVL--TASDGGDP-VRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E++ +GT + VV+A+D D GVN+++ ++
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYS 280
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P+FP + YS IPE+ P G + V+A D D N++++++
Sbjct: 431 PLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|397518038|ref|XP_003829205.1| PREDICTED: protocadherin alpha-4 [Pan paniscus]
Length = 798
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN
Sbjct: 329 PLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVN 382
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 179
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 54 LYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ 111
L K +G L+++L R E + + T G P L GT I V D NDN P F +
Sbjct: 188 LVKGLGLILRKSLDREEAPEIFLVLTATDGGKP-ELTGTVQLLITVLDANDNAPAFDRTI 246
Query: 112 YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
Y + + E+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 247 YKVRLLENVPNGTLVIKLNASDLDEGLNGDIIYSFSNDISPN 288
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LWATASVSVEVADVNDNAPAFVQPEYTVFVKENNPPGCHIFTVSAWDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
>gi|297295313|ref|XP_001088244.2| PREDICTED: protocadherin gamma-B2-like [Macaca mulatta]
Length = 824
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 199 PDGRKYPEL-ILKHSLDREEHSFHQLVLTAVDGGDP-PQSGTTQIRIQVTDANDNPPVFS 256
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 257 QDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYS 293
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 403 AKFILKSSSKNYYKLMTDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 461
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW----NELEPNGLFS 154
P+F + Y + + E+ P G + +SASD DLG N ++S+ ++LEP + S
Sbjct: 462 APLFQQTCYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASDLEPREILS 516
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D+ND P V+ +PED P GTV+ ++ D D G N
Sbjct: 333 EAKDPGDLAAHCSIQVEILDENDCAPEVIVTSVFTPLPEDSPPGTVIALIKTRDRDSGEN 392
Query: 140 SKL 142
++
Sbjct: 393 GEV 395
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F S+ L I E GT + A D+D+G NS
Sbjct: 133 AVIVQDINDNTPLFKQSKIHLKIGESTKPGTTFPLDPALDSDVGPNS 179
>gi|119631139|gb|EAX10734.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_a [Homo sapiens]
Length = 637
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + + K G G L GT I + D ND
Sbjct: 205 GQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVND 264
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S + L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 265 NPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|440911206|gb|ELR60911.1| Cadherin-9 [Bos grunniens mutus]
Length = 785
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G +K AL E + V K G G L GT I + D N+N P FP S Y
Sbjct: 215 GIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQ 274
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
PE VP+GT + + A+D D+G N+++ ++ E +G
Sbjct: 275 FHSPESVPLGTPLGRIKANDPDVGENAEVEYSIAEGDG 312
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 56 KNVGTLKRA--LRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQY 112
+N G + A L EE L V K G V + II + D NDN P F Y
Sbjct: 105 ENTGDIHAAKKLDREEKSLYVLRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFTKDLY 164
Query: 113 SLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSD 156
+ S+PE VGT V V+A+DAD G ++K+ ++ L+ FS D
Sbjct: 165 TASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVD 211
>gi|41054976|ref|NP_955764.1| cadherin-24 precursor [Mus musculus]
gi|81911451|sp|Q6PFX6.1|CAD24_MOUSE RecName: Full=Cadherin-24; Flags: Precursor
gi|34784506|gb|AAH57373.1| Cadherin-like 24 [Mus musculus]
Length = 781
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D DLG N+ ++++ L G
Sbjct: 279 GRLKAQDPDLGDNALVAYSILNGEG 303
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P+FP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|195354340|ref|XP_002043656.1| GM19748 [Drosophila sechellia]
gi|194127824|gb|EDW49867.1| GM19748 [Drosophila sechellia]
Length = 1591
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 38 AFTFSIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIV 97
A + + F N TT + L R + + + L + T G NP L ++V
Sbjct: 117 ALSVECSDFTVNATTGCIRLNKPLDRE-KQDNYALHI--TAKDGGNP-MLSSEALVYVLV 172
Query: 98 EDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLFS 154
+D NDN P+F V +Y + ED+P GTV+ V+ A D D+G N+++ ++ E + LF
Sbjct: 173 DDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQDEELFR 232
Query: 155 SD 156
D
Sbjct: 233 ID 234
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I + D NDN P+ + + + E +GTVV + A+DAD G+N+++++
Sbjct: 67 ITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTY 116
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130
+++ ++ + G+N + I V D NDN P+F Y ++ D P GT++ V
Sbjct: 1234 FVEAKSVLYDGTNSNVRRAVTSIYISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVK 1293
Query: 131 ASDADLGVNSKLSWNELEPNG-LFSSDLRV-EWVINRSVDQH 170
A D D N ++ + + NG LF D + E I + V+ H
Sbjct: 1294 AVDLDSAENGEVRYELKKGNGELFKLDRKTGELSIKQHVEGH 1335
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
++ + D ND P Y+++IPE+ GT + ++A+D D G N+KLS+ NG
Sbjct: 1458 SVSIMDVNDCYPEIESDIYNITIPENASFGTQILKINATDKDSGANAKLSYYIESINGQN 1517
Query: 154 SSDL 157
+S+L
Sbjct: 1518 NSEL 1521
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSA 131
+KV N KG+N N I + D NDN P F ++Y ++ E +G+ V V
Sbjct: 910 IKVFNLTVKGTNMAAESSCQNIIIHILDANDNIPYFVQNEYVGALSESAAIGSYVLKVHD 969
Query: 132 S----------DADLGVNSKLSW 144
S DAD+GVN + +
Sbjct: 970 SSKDHLTLQVKDADVGVNGMVEY 992
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 58 VGTLKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYS 113
+ T +R L E EH L+V + N P++ + + ++ V D NDN+P F Y
Sbjct: 452 IKTTERKLDRENQAEHILEVAIS----DNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYK 507
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+ +P V + V A D+D G N ++++
Sbjct: 508 VQVPSSATVNQSIFQVHAIDSDSGENGRITY 538
>gi|26336132|dbj|BAC31751.1| unnamed protein product [Mus musculus]
Length = 754
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT +
Sbjct: 236 AKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAI 295
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
V A+D D+G N++ S++ ++ +G
Sbjct: 296 GRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 174
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 175 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|14165413|ref|NP_113688.1| protocadherin alpha-4 isoform 2 precursor [Homo sapiens]
gi|5457013|gb|AAD43743.1|AF152482_1 protocadherin alpha 4 short form protein [Homo sapiens]
gi|3540166|gb|AAC34322.1| KIAA0345-like 10 [Homo sapiens]
gi|85567551|gb|AAI12103.1| Protocadherin alpha 4, isoform 2 precursor [Homo sapiens]
gi|109731337|gb|AAI13610.1| Protocadherin alpha 4 [Homo sapiens]
gi|313883536|gb|ADR83254.1| protocadherin alpha 4 [synthetic construct]
Length = 798
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
PL G C + VED NDN P SL I ED P+GTV+ ++S SD D+GVN
Sbjct: 329 PLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIREDAPLGTVIALISVSDKDMGVN 382
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 41 FSIAKFIANPTTRLYKNVG-TLKRAL-RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVE 98
FS+ K P L K +G L+++L R E + + T G P L GT I V
Sbjct: 178 FSLEK---PPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKP-ELTGTVQLLITVL 233
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW---NELEPN 150
D NDN P F + Y + + E+VP GT+V ++ASD D G+N + + N++ PN
Sbjct: 234 DANDNAPAFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPN 288
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
V D NDN P+FP +Q +LSI E P+ + + ASDAD+G N+ L++ L PN FS
Sbjct: 123 VRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYR-LSPNEYFS 179
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G +P L T + ++ V D NDN P F +Y++ + E+ P G + VSA DAD
Sbjct: 426 TARDGGSPS-LWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADA 484
Query: 137 GVNSKLSWNELE 148
N+ +S++ +E
Sbjct: 485 QENALVSYSLVE 496
>gi|47209330|emb|CAF93465.1| unnamed protein product [Tetraodon nigroviridis]
Length = 922
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L R + E H L T G +P GT + V D NDN P+F S Y S+PE+
Sbjct: 318 LDREKQKEMHLLL---TAVDGGSP-QRSGTVVIHVTVLDANDNAPVFSQSVYKSSLPENS 373
Query: 121 PVGTVVQVVSASDADLGVNSKLSW---NELEPNGLFSSDLRVEWV-INRSVD 168
P+ T+V VSA+DAD GVNS++++ + LE +F D + V +N ++D
Sbjct: 374 PLDTLVITVSAADADEGVNSEITYGFDHVLEDENVFLLDTKTGVVRVNGAID 425
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NPT + + TL R +R V N + PL TI + D+NDN P
Sbjct: 2070 FTLNPTDGILRVADTLDREIRVN----YVLNITARDRGDPPLATQSQLTIKILDENDNIP 2125
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+F QYS S+ E+ +G +V VSA+D D G N ++ ++
Sbjct: 2126 VFDPKQYSASVAENASIGAMVLQVSATDMDEGDNGRVRYS 2165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N TI V D NDN P F S +S+ E P GT + ASDAD GVNS++ ++
Sbjct: 1194 PLKSTANITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGVNSQVVFS 1253
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T + V+D NDN P+F + Y ++ E++P+G++V A+D D+G+N+K+ +N
Sbjct: 2321 PLSNTGIVKVEVQDINDNGPVFELQYYHATVQENLPIGSLVLKPVATDKDVGLNAKIRFN 2380
Query: 146 EL 147
L
Sbjct: 2381 LL 2382
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
G P P +G + + D NDN PIF S YS+++ E V G+ V V ASD DLG NS
Sbjct: 123 GGTP-PRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNETVLPGSPVLQVMASDNDLGDNS 181
Query: 141 KLSWNELEPNGLFSSD 156
KL++ E F+ D
Sbjct: 182 KLTYYLSETETQFTVD 197
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
FI PT+ + TL R + V N + + N G + + V+D NDN P
Sbjct: 1713 FILEPTSGKLQLKDTLDRETK------DVYNMRIR-VNDGVQYTETDVIVQVDDTNDNPP 1765
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
IF + YS IPE+ P G V + A DADL N+++S+
Sbjct: 1766 IFEETVYSFDIPENAPRGYQVGEILAKDADLAQNAQVSY 1804
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 61 LKRALRTE-EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
L++ +R E E VE G NP PL + + + D ND+ P+F + Y S+ E
Sbjct: 831 LQKPIRAEPETVFYVEIMATDGGNP-PLSSRLSLPVHIADVNDHTPVFDHTSYETSLLET 889
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
V T ++ASD+DLG N ++S+ ++ N
Sbjct: 890 TKVNTRFFALAASDSDLGANGRISYEIIDGNA 921
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
I V D ND+ P+F S+YS + E P GT V ++A+D D GVN+++ + L N L
Sbjct: 366 INVNDVNDHEPVFEKSEYSAVLSELAPTGTFVASIAATDEDTGVNAQVYYEILTGNEL 423
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
I V D+NDN P F S ++ +IPE+ P T V ++A D D+G N++LS++ L + F
Sbjct: 969 IHVIDENDNPPHFTNSTFTFNIPENAPPDTFVGKLTAVDRDIGRNAELSYSVLSQSQDFK 1028
Query: 155 SDL 157
D+
Sbjct: 1029 IDM 1031
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
++++ +E NP PL +IV D NDN P F + Y ++I E P GT +
Sbjct: 1072 DNYILIEAVVTDNGNP-PLSDKVKVKVIVTDVNDNAPEFLRAPYQVTISEGAPEGTHIMH 1130
Query: 129 VSASDADLGVNSKLSWNELEPN--GLFSSD 156
V DAD G+N + ++ N LFS D
Sbjct: 1131 VFTQDADEGLNGDVYYSLAAGNEANLFSLD 1160
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL T ++V D NDN PIFP + I E + + T + V+A D D G+N K+++
Sbjct: 1299 PLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIALKTPIVTVTADDPDSGLNGKVTY 1357
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
++V D+N + P F Y + +PE+ P+G+ + VSA+D D G N L +N ++ N
Sbjct: 3069 VVVTDENRHAPEFKPLSYQVIVPENEPIGSTILTVSATDKDNGPNGMLHYNIVDGN 3124
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L GT + + + D+NDN P F YSL++ E+ +GT V V++SD DLG N+ ++
Sbjct: 2744 LTGTASVLLHLLDKNDNPPKF-TRLYSLNVTENADIGTFVICVTSSDLDLGENANATY 2800
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT L G L R ++ + + P P + + D+ND P
Sbjct: 426 FNIDTTTGLVVTAGPLDREMQASVEL----SISARDGGPNPKFAYTQLKVTILDENDEAP 481
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN------ELEPNGLFSSDLRV 159
F Q ++S+ EDV T+V ++SA+D D G N ++++ L P +
Sbjct: 482 NFGQQQINVSLSEDVAPPTLVTLLSATDNDQGTNGSVTFSLAPSVERLYPQQFAIDSITG 541
Query: 160 EWVINRSVDQHT 171
+ + +++D+ T
Sbjct: 542 QLMTRKALDRET 553
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPE-DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
TI ++DQNDN P F S YS + PE V V QV++ G NS +S++ P+ +
Sbjct: 2851 TITIQDQNDNAPEFEHSFYSFNFPELQHAVAFVGQVIATDRDKRGPNSVISYSLQSPSPI 2910
Query: 153 FSSD 156
FS D
Sbjct: 2911 FSVD 2914
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 60 TLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNNPIFPVSQYSLSI 116
TL L EE H++ + + G P + T T V D NDN P+F YS I
Sbjct: 1825 TLTAKLDYEEVQHYILIVQAQDNGQ---PSLSTTITVYCNVLDLNDNTPLFDPMSYSSEI 1881
Query: 117 PEDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VP+G V VSA D D G N + ++
Sbjct: 1882 FENVPIGMEVVTVSAKDIDSGKNGLIEFS 1910
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P + N T+ V D NDN P F + +++ +P ++ G V ASD D G+N+ + +N
Sbjct: 2426 PRATSVNLTVTVGDTNDNVPKFEANTFNIVVPNNIRAGEFVFGARASDLDEGINAMIFYN 2485
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
PL TII+ D NDN P+F S+Y I E+ P GT+V A+D D N+ + +
Sbjct: 3165 PLSAVAMVTIILTDVNDNPPLFNQSEYHGYIEENKPSGTIVFQAHATDKDSAKNAIIHY 3223
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L T TI+V+D ND +P+F VS S+ E+V + TVV V A D D G N + +
Sbjct: 1994 LSSTVQVTIVVKDVNDESPVF-VSANETSVMENVAINTVVFTVKAIDNDEGRNGYIDYYI 2052
Query: 147 LEPNGLFSSDLRVE 160
+P L ++ VE
Sbjct: 2053 DDPRTLGQTNEVVE 2066
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSW 144
PL C I + D N+N P F ++Y +PE+ G VV+V + D D+GVN+++ +
Sbjct: 2954 PLYTECLVNINIVDANNNPPKFAQAEYLSPLPENAGAGQRVVKVHANDDYDVGVNAEIDY 3013
Query: 145 NELEPNGLFSSDLRVEWVINR 165
L SS+L + +N+
Sbjct: 3014 T------LVSSNLSAYFSLNK 3028
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
P GT I ++D NDN P F IPE+ P GT + ++A+D DL N
Sbjct: 3482 PQTGTATVRINLDDINDNGPTFTSEGLIGYIPENEPAGTSIMTLTATDPDLPEN 3535
>gi|114652110|ref|XP_522800.2| PREDICTED: cadherin-24 isoform 3 [Pan troglodytes]
gi|332841882|ref|XP_003314306.1| PREDICTED: cadherin-24 isoform 1 [Pan troglodytes]
gi|410211496|gb|JAA02967.1| cadherin 24, type 2 [Pan troglodytes]
gi|410293668|gb|JAA25434.1| cadherin 24, type 2 [Pan troglodytes]
gi|410339391|gb|JAA38642.1| cadherin 24, type 2 [Pan troglodytes]
Length = 781
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
T+E +L V K G + G L G+ T+ + D NDN P FP S Y S+ E GT+V
Sbjct: 219 TQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLV 278
Query: 127 QVVSASDADLGVNSKLSWNELEPNG 151
+ A D D+G N+ ++++ L+ G
Sbjct: 279 GRLRAQDPDVGDNALMAYSILDGEG 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN PIFP+ Y ++PE VGT V V+A DAD G ++KL
Sbjct: 129 PLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDADDPSYGNSAKL 188
Query: 143 SWNELEPNGLFSSD 156
+ L+ FS D
Sbjct: 189 VYTVLDGLPFFSVD 202
>gi|85662400|ref|NP_031693.2| cadherin-8 isoform 2 precursor [Mus musculus]
gi|408359995|sp|P97291.2|CADH8_MOUSE RecName: Full=Cadherin-8; Flags: Precursor
gi|148679244|gb|EDL11191.1| cadherin 8 [Mus musculus]
Length = 799
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 174
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 175 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|66773240|ref|NP_001019359.1| protocadherin 2 gamma 16 precursor [Danio rerio]
gi|51557427|gb|AAU06400.1| protocadherin cluster 2 gamma 16 [Danio rerio]
Length = 947
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 43 IAKFIANPTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
I K +NP Y + L++AL EEH L ++ G NP G+ +IV D N
Sbjct: 178 ILKQHSNPDGSKYAEM-VLQKALDREEHPHLSLKLIAVDGGNPQ-RSGSVIIDVIVLDVN 235
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
DN P+F + Y S+ E+ P GT + V+A+DAD G N ++++N + G
Sbjct: 236 DNAPVFNQTVYRASVMENAPKGTYITTVNATDADSGSNGRITYNFYKQKG 285
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP--IFPVSQYSLSIPEDVP----VGTV 125
+KV G +P PL I ++DQNDN P ++PV + + E VP VG +
Sbjct: 527 IKVTVKAQDGGSP-PLSSNVTVIIFIQDQNDNAPQVLYPVQSGASVVAEIVPRSADVGYL 585
Query: 126 VQVVSASDADLGVNSKLSW 144
V V A D D G N+ LS+
Sbjct: 586 VTKVVAVDVDSGQNAWLSY 604
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ + G L + T+ V D NDN P+ +S ++ ED P T + +++ DAD N
Sbjct: 319 EARDQGGLTDSSKITLDVIDVNDNAPVINAMSFSSTVSEDAPPDTTIAIINVKDADTDDN 378
Query: 140 SKLS 143
++S
Sbjct: 379 GRVS 382
>gi|26352175|dbj|BAC39724.1| unnamed protein product [Mus musculus]
Length = 716
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 174
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 175 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|397506458|ref|XP_003823744.1| PREDICTED: cadherin-8 [Pan paniscus]
Length = 826
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 262 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 321
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 322 IGRVKANDQDIGENAQSSYDIIDGDG 347
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + S P L I V+D NDN P F Y
Sbjct: 144 DIHAIKRLDREEKAEYTLTAQAVDWETSKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 201
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 202 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 244
>gi|395736292|ref|XP_002816064.2| PREDICTED: protocadherin gamma-B2 [Pongo abelii]
Length = 824
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 50 PTTRLYKNVGTLKRALRTEEH-WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
P R Y + LK +L EEH + ++ T G +P P GT I V D NDN P+F
Sbjct: 199 PDGRKYPEL-ILKHSLDREEHSFHQLVLTAVDGGDP-PQSGTTQIRIKVTDANDNPPVFS 256
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
Y +++ EDVP G V V+A+D D G+N++++++
Sbjct: 257 QDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYS 293
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
AKFI +++ Y + T R E + T G P PL + T+ + D NDN
Sbjct: 403 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKP-PLSSSIIVTLHISDVNDN 461
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163
P+F + Y + + E+ P G + +SASD DLG N ++S++ + +SDL+ ++
Sbjct: 462 APVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYS------IVASDLKPREIL 515
Query: 164 N 164
+
Sbjct: 516 S 516
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 80 KGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
+ +PG L C+ + + D ND P V+ +PED P GTV+ ++ D D G N
Sbjct: 333 EAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVFTPLPEDSPPGTVIALIKTRDRDSGEN 392
Query: 140 SKL 142
++
Sbjct: 393 GEV 395
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
+IV+D NDN P+F ++ +L I E GT + A D+D+G NS
Sbjct: 133 AVIVQDVNDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNS 179
>gi|281354660|gb|EFB30244.1| hypothetical protein PANDA_019201 [Ailuropoda melanoleuca]
Length = 334
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 48 ANPTTRLYKNVGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
P + G ++ AL +E + + K G G L GT I + D ND
Sbjct: 205 GQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVND 264
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
N P FP S + L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 265 NPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
T+EH++ + GS P L GT +IV+D NDN P F Y +IPED P GT
Sbjct: 2325 ETKEHFVLMITATDSGS-PA-LTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTD 2382
Query: 126 VQVVSASDADLGVNS 140
V +V+ASDAD N+
Sbjct: 2383 VLLVNASDADASTNA 2397
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F NP T ++ L R L E + + + + G T V D NDN P
Sbjct: 1889 FFLNPVTGVFN----LTRVLDYEAQQYYILTVRAE--DGGGQFTTVRVYFNVLDVNDNPP 1942
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL--FSSDLRVEWVI 163
IF +S YS S+ E++P+G+ V V + +DAD G+NS+L+++ +GL F+ D +
Sbjct: 1943 IFSLSSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDGLGQFTVDKNGVLKV 2002
Query: 164 NRSVDQHT 171
+S+D+ +
Sbjct: 2003 LKSLDRES 2010
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 50 PTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLV----GTCNTTIIVEDQNDNNP 105
P L K L R R + L V + + G+ PG V + I V D ND+ P
Sbjct: 415 PNLSLIKVASALDRE-RIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPP 473
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
IF Y +++ E+ P G+ V VSA+D D G+N+ L ++ + NGL
Sbjct: 474 IFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIVSGNGL 520
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 44 AKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103
++F NP+T L R T+E++ V + GS P PL + + + V D NDN
Sbjct: 2406 SQFTINPSTGQIITSALLDR--ETKENYTLVVVSSDAGS-PEPLSSSTSVLVTVTDVNDN 2462
Query: 104 NPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F Y IP P G+ V V+ +DAD+G NS+L ++
Sbjct: 2463 PPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYS 2504
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + V+D NDN P+F S Y +PED VG+ V V+A+DAD G N+ + +
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEGTNADIRY 287
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
L + L E L N K P T + I V D NDN P FP SI E++
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI 1433
Query: 121 PVGTVVQVVSASDADLGVNSKLSWNELE 148
P+GT V V+A D D +N +LS+ ++
Sbjct: 1434 PIGTSVISVTAHDPDADINGQLSYTIIQ 1461
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL T N T+I+ED NDN P+F + Y+ E+ G+ V V+A D D G N ++ ++
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVNAIDKDFGPNGEVRYS 1138
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW--NELEPNGL 152
I V D ND+ P F YS IPED G++V + A+D D GVN ++++ NE + +G+
Sbjct: 1829 ITVSDVNDHIPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI 1888
Query: 153 F 153
F
Sbjct: 1889 F 1889
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G C+ T+ V D NDN+P+F +Y ++ E+ P GT V ++A+DAD G N+ +++
Sbjct: 3176 GYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAY 3231
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
L TC I + D+NDN P FP S + + E++ +G +V V+A+D+D G N+ L ++
Sbjct: 1295 LNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYS 1353
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPV--G 123
+T + L V+ +GS P T +I++ D ND P F +S YS+++PE++
Sbjct: 2221 KTPTYSLTVQ-AADRGSTP--RTDTSTVSIVLLDINDFVPTFELSPYSVNVPENLGTLPR 2277
Query: 124 TVVQVVSASDADLGVNSKLSW-----NELEPNGLFSS-DLRVEWVINRSVDQH 170
T++QVV A D D G NSKLS+ NE L +S +LRV ++R +H
Sbjct: 2278 TILQVV-ARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSLDRETKEH 2329
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
+++L + KG NP PL IIV ++N + P F + S +IPE +G +V+
Sbjct: 3053 QNFLITVTARDKG-NP-PLSSQATVQIIVTEENYHTPEFSQNHMSATIPESHGIGAIVRT 3110
Query: 129 VSASDADLGVNSKLSWN 145
VSA D D +N +S++
Sbjct: 3111 VSARDRDAAMNGLISYS 3127
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 99 DQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D NDN+P+F QY I E+ P G+ + VSA+D DLG+N + ++
Sbjct: 681 DVNDNSPVFYPIQYFAHIQENEPGGSYITTVSATDPDLGLNGTIKYS 727
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 92 NTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN- 150
N TI+V D NDN P+F +SQ +L+ +G+V+ + A+D D G N ++ + + +
Sbjct: 1514 NVTILVTDLNDNVPMF-ISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDT 1572
Query: 151 -----GLFSSDLRV 159
+S DLRV
Sbjct: 1573 DTFIVDRYSGDLRV 1586
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
T + +II+ D NDN P F +S IPE+ P+ T+V A+D D G NS + +
Sbjct: 2031 FTSTAHVSIILLDVNDNPPTF-LSPKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYTL 2089
Query: 147 LEPNG 151
L P G
Sbjct: 2090 LNPLG 2094
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
I ++D NDN P+FP L++ E++ G+ + ++A DAD G N+ +++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTY 1777
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEP 149
+ + TI V D NDN P F Y L PE +G+ V VSA+D D G N ++ +
Sbjct: 2855 STDVTIFVTDVNDNAPRFSRPSYYLDCPELPEIGSKVTQVSATDPDEGSNGQVFYFIKSQ 2914
Query: 150 NGLFSSDLRVEWVINRSVDQHTN 172
+ F + + N+ V ++ N
Sbjct: 2915 SEYFRINATTGEIFNKQVLKYQN 2937
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
L + ++V D NDNNP+F Y + I E+ GT + V A+D D G N ++ +
Sbjct: 2134 LSSSTEVVVMVLDINDNNPVFVQPLYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGI 2193
Query: 147 LEPNGLFSSDLRVEWV 162
++ N + + R++ V
Sbjct: 2194 VDGNA--NQEFRIDSV 2207
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R + E LKV K+ GS G + + V D ND PIF ++ YS+ I E
Sbjct: 3359 GLLDRE-KEERVSLKVL-AKNFGSIRGADIDEVTVNVTVLDANDP-PIFSLNIYSIQISE 3415
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELE-------PNGLFS 154
VP GT V VSA D+D S SW+ NG FS
Sbjct: 3416 GVPTGTHVTFVSAFDSD----SVPSWSRFSYFIGSGNENGAFS 3454
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTII-VEDQNDNN 104
F N T +++ L R + ++ L ++++ KGS P T II + D+NDN
Sbjct: 2716 FAINHATGEIRSIRPLDRE-KIPQYVLTIKSSD-KGS---PSQSTSVKVIINILDENDNA 2770
Query: 105 PIFPVSQ-YSLSIPEDVPVGTVVQVVSASDADLGVNS 140
P F SQ +S +PE+ P+G V V+ SD D+G+N+
Sbjct: 2771 PRF--SQIFSAYVPENSPLGYTVTRVTTSDEDIGINA 2805
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPN 150
T+ V D NDN P+F Y +++ E PV + V A D D G N +++++ E N
Sbjct: 983 TVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGN 1039
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
TI V D DN P+F + YS + E+V +G V VSAS DL N + G+F
Sbjct: 780 TITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMF 839
Query: 154 S 154
+
Sbjct: 840 A 840
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDAD 135
T NP L+ TI D NDN P F ++Y + ++V VGT +++V + D D
Sbjct: 2954 TSSDRGNPS-LLSETTVTINTVDSNDNAPQFLKTKYFTPVTKNVKVGTKLIKVTAVDDRD 3012
Query: 136 LGVNSKLSW 144
G+NS++ +
Sbjct: 3013 FGLNSEVEY 3021
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G I + D NDN+P+ FP + S+ E+ VGTVV +++ +DAD
Sbjct: 333 LTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDAD 386
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 58 VGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ-YSLSI 116
G L R L ++ V N + P + + D ND P+F + Y +S+
Sbjct: 537 AGGLDRELASQ----IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSV 592
Query: 117 PEDVPVGTVVQVVSASDADLGVNS--KLSWNELE 148
E+ P GT + V+ A+D DLG N + S E E
Sbjct: 593 VENAPTGTELLVLRATDRDLGDNGTVRFSLQEAE 626
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
++V D NDN P+FP ++ ED G V + +A+D+D+G N
Sbjct: 123 VLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 167
>gi|73954381|ref|XP_546371.2| PREDICTED: cadherin-12 isoform 2 [Canis lupus familiaris]
Length = 794
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D + P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDVEEP-PVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y S+PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|351714550|gb|EHB17469.1| Cadherin-10 [Heterocephalus glaber]
Length = 788
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + V K G G L GT I + D NDN P FP +
Sbjct: 216 GIIRTALPNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
L + E PVGT V V A+DAD G N+++ + ++ +G D+ E
Sbjct: 276 LRVLESSPVGTAVGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTE 322
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP + I +ED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 363 GPFKDSTIVKISIEDV-DEPPVFSRSSYVFEVHEDIEVGTIIGTVMARDPD 412
>gi|194219789|ref|XP_001917793.1| PREDICTED: protocadherin gamma-B7-like [Equus caballus]
Length = 836
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL R ++ H + T P P GT I+V D NDN P+F Y +S+PED
Sbjct: 199 TLDRETQSTHHLVL---TALDSGEP-PRSGTTQIRILVVDANDNPPVFSQDVYRVSLPED 254
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNEL 147
VP G+ V VSA+D D G N++++++ L
Sbjct: 255 VPPGSSVLKVSATDQDEGFNAEITYSFL 282
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW- 144
PL + T+ V D NDN P+F S Y + +PE+ P G + VSASD DLG N ++S+
Sbjct: 431 PLSSSTTITLHVTDVNDNAPVFRQSAYLVHVPENNPPGASIAQVSASDPDLGPNGRVSYS 490
Query: 145 ---NELEPNGLFS 154
++LEP L S
Sbjct: 491 IVASDLEPRALSS 503
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFS 154
++VED ND+ P F + +L I E V G + A D D+ +NS LS +L PN FS
Sbjct: 121 VVVEDINDHAPQFHKDEINLEISESVSPGMGTILECAKDPDISMNS-LSKYQLSPNEYFS 179
Query: 155 SDLR--------VEWVINRSVDQHTN 172
++ E V+ +++D+ T
Sbjct: 180 LVVKDNPDGGKYPELVLKKTLDRETQ 205
>gi|190337986|gb|AAI62470.1| Pcdh2g9 protein [Danio rerio]
Length = 958
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
R ++ +++ T G P P GT + V D NDN P+F + Y +S+PE+ PV TV
Sbjct: 213 REQQKDVRLILTAVDGGTP-PRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPENSPVDTV 271
Query: 126 VQVVSASDADLGVNSKLSW 144
V VSA+DAD G N ++++
Sbjct: 272 VVTVSATDADEGQNGEVTY 290
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEPNGLFSS 155
++D NDN+PIF + I E G +V+ A DAD+G NS + E PN + +
Sbjct: 134 IQDINDNSPIFHKDEIKYEIRESADKGARFRVIEARDADVGHNSVQKYTLERNPNFILAV 193
Query: 156 DLR------VEWVINRSVDQHTNK 173
+ R VE V+++ +D+ K
Sbjct: 194 NSRTDGSRFVELVLDKELDREQQK 217
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
G L R L +E + T +P PL T N + V D NDN P+F Y + E
Sbjct: 419 GELDRELLSE---YNITITATDEGSP-PLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 474
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157
+ G+ + VSA+D D N + ++ L SSD+
Sbjct: 475 NNKAGSSISSVSATDPDWRQNGTVVYS------LLSSDV 507
>gi|16445393|ref|NP_004052.2| cadherin-12 preproprotein [Homo sapiens]
gi|158937438|sp|P55289.2|CAD12_HUMAN RecName: Full=Cadherin-12; AltName: Full=Brain cadherin;
Short=BR-cadherin; AltName: Full=Neural type cadherin 2;
Short=N-cadherin 2; Flags: Precursor
gi|29126956|gb|AAH47608.1| Cadherin 12, type 2 (N-cadherin 2) [Homo sapiens]
gi|119631141|gb|EAX10736.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_c [Homo sapiens]
gi|189054555|dbj|BAG37328.1| unnamed protein product [Homo sapiens]
gi|190689985|gb|ACE86767.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
gi|190691357|gb|ACE87453.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
Length = 794
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
L GT T++V+D NDN P+F S + +I ED P GT V +V++SDAD+G+N + +
Sbjct: 2323 LSGTGTVTVLVDDVNDNVPVFSSSTFHTTIAEDAPTGTDVLLVNSSDADVGINGAVRY 2380
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL +C +I + D+NDN+P FP S S+ + E++ +G +V V+A+DAD G N+ ++++
Sbjct: 1270 PLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGDLVVSVTATDADSGQNADITYS 1329
Query: 146 --ELEPNGLFS 154
+ +G FS
Sbjct: 1330 ITAINNHGTFS 1340
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGL 152
I V+D ND+ P F YS IPEDV G++V+V+ ASD+D +N +++++ E + +G
Sbjct: 1808 ITVKDVNDHTPKFSRPTYSFDIPEDVTPGSIVEVILASDSDSELNGEVNYSLEEDDEDGT 1867
Query: 153 F 153
F
Sbjct: 1868 F 1868
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGL 152
I V D ND+ PIF Y + I ED+P G+ ++ VSA+D D G N+ L ++ + N L
Sbjct: 441 IFVNDINDHPPIFQEELYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLVSGNSL 498
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + + T+IV D NDN P F + Y + + E++ GT V V ASDAD G N ++ ++
Sbjct: 2112 PLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILTGTDVIQVFASDADDGSNGQIRFS 2171
Query: 146 ELEPNGLFSSDLRVEWV 162
+G +SD R++ V
Sbjct: 2172 --ISSGNTNSDFRIDSV 2186
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T+ +L +E + + + N K PL I V ++N + P F SQ S ++PE
Sbjct: 3019 TVFSSLVSEVNKIFLMNVTAKDKGNPPLSANTAVRIAVTEENHHTPEFSQSQISATVPES 3078
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLF 153
+ VGT ++ VSA D D +N +++N NG+F
Sbjct: 3079 LAVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVF 3114
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + N T+I++D NDN P+F + Y E+ G++V V A D D G NS++ ++
Sbjct: 1055 PLSASVNVTVILDDVNDNRPLFNSTNYVFHFKEEQQRGSLVGQVFAEDKDFGPNSEIRYS 1114
Query: 146 ELEPNGLF 153
P F
Sbjct: 1115 FETPQHNF 1122
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 89 GTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G + ++D NDN P+F QY S+ ED VG+ + ++ASD D G N+++ +
Sbjct: 217 GYLQVNVTIQDINDNPPVFEQDQYHSSVFEDAAVGSSILQITASDQDEGANAEIRY 272
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTK-HKGSNPGPLVGTCNTTIIVEDQNDNN 104
F+ NP T ++ + RAL E + K H G G L T V D NDN
Sbjct: 1868 FLLNPVTGVFN----VTRALDYETQRYYILTAKAHDG---GGLASTVRVYFNVLDINDNP 1920
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLF 153
P+F S YS S+ E +P G+ + V ASD D G N++L + +P G F
Sbjct: 1921 PVFSSSAYSTSVSESLPPGSSIVTVEASDGDDGANAQLLYKIASGDPQGHF 1971
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S+ F + + L + L R + +E V N K P + + + D N
Sbjct: 497 SLGWFSISDNSGLVTSAALLDREVASE----IVLNISAKDQGLQPKISYTKLIVSITDVN 552
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
D P F S Y +S+ E P GT + V+SASD+DLG N + ++
Sbjct: 553 DQVPTFTQSTYHVSLLEHAPAGTELLVLSASDSDLGPNGTIRFS 596
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F+ N + R + L R R L V G P L + ++ V D NDN P
Sbjct: 2385 FLINCSRRQIISSALLDREERANYQLLVVAT---DGGQPKGLSSSATVSVTVADINDNPP 2441
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
F Y IP G +V V+ +D D G N++L ++ + N
Sbjct: 2442 RFHHHPYVTHIPASTAAGALVFAVTVTDEDAGSNAQLQYSLMGRNA 2487
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
TI V D NDN PIF +Y ++ E+VP GT V ++A+D D G N+ +++
Sbjct: 3158 TIQVTDVNDNPPIFDPDEYFPTVQENVPSGTTVVRMNATDRDSGPNAVMAY 3208
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 60 TLKRALRTEE--HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
T+ R L EE H++ K + G V T + TI + D NDN P F Y L P
Sbjct: 2805 TINRPLNREETDHYI----VKVSAHDSGWTVST-DVTIFITDVNDNVPRFTRPSYYLEYP 2859
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E +G++V VSA D D G N K+ +
Sbjct: 2860 ELTEIGSLVTQVSAVDPDEGFNGKIFY 2886
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P VG N T+ D NDN P+F QY S+ E+ P G+ V V ASD DLG N
Sbjct: 642 GSPPLHSVGRVNITLW--DINDNRPVFYPVQYFASVKENEPPGSYVTTVLASDRDLGRNG 699
Query: 141 KLSW 144
+ +
Sbjct: 700 TVKY 703
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
I+V D NDN+P+FP + +S ED G V + +A+DAD+G N
Sbjct: 108 IVVLDMNDNSPVFPDASIVVSFKEDASRGRQVILDTATDADIGSN 152
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
T +II+ D ND PIF SQ + I E+ PV TVV A+DAD G NS + ++
Sbjct: 2010 FTSTAQVSIILLDVNDCPPIF-TSQKTTYIQENTPVDTVVFTAQATDADSGPNSYVEYS 2067
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ V D NDN P+F SIPE++PV V ++A D D +N +L ++
Sbjct: 1384 VYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTITAHDTDADINGQLEYS 1434
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLF 153
T+ V D DN P+F YS + E+V GTV+ VSA+ DL N + GLF
Sbjct: 757 TVTVTDTQDNPPVFSQENYSFVMFENVSPGTVIGTVSATTVDLNSNISYLITSGDQRGLF 816
Query: 154 S 154
+
Sbjct: 817 A 817
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 87 LVGTCNTTIIVEDQNDNNPI-----FPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
L G TTI + D NDN+P+ FP + S+ E+ +GTVV +++ SD+D
Sbjct: 317 LSGRTETTIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSD 370
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGT-VVQVVSASDADLGVNSKLSW 144
PL+ + + D NDN P+F Y + + V VGT +++VV+ + D G+NS++ +
Sbjct: 2939 PLISETTVILNIVDSNDNPPVFESLSYFTPVTKSVKVGTRLMRVVAHDEKDFGLNSEIEY 2998
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLS 143
P PL + ++D NDN P F Y SI E P T + VSASD D N +
Sbjct: 1163 PRPLRDQAKVQVYIQDINDNPPKFTKDIYQASISESAPNMTQLLRVSASDVDESKNGVVH 1222
Query: 144 WNELEPN 150
++ E N
Sbjct: 1223 YHIAEGN 1229
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
TL +L+ + +VE T P + + I V D NDN+P+F Y + I E
Sbjct: 926 TLTGSLKASTNSYEVEVTASDMGVP-QRTSSLSLIISVYDVNDNSPMFDQLSYEVIILES 984
Query: 120 VPVGTVVQVVSASDADLGVNSKLSWNELEPN-----GLF-SSDLRVEWVINRSVDQHTN 172
PV + V A+D D G+N ++ ++ N G+F L ++ ++R V N
Sbjct: 985 EPVNSRFFKVEATDKDSGLNGEIMYDIAGGNTGDMFGIFPDGQLYIKAELDREVQDRYN 1043
>gi|426350366|ref|XP_004042748.1| PREDICTED: protocadherin gamma-A12 [Gorilla gorilla gorilla]
Length = 821
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LKRAL EE H L + T G +P GT ++V D NDN P F +Y S+P
Sbjct: 196 LKRALDREEKAAHHLVL--TASDGGDP-VRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E++ +GT + VV+A+D D GVN+++ ++
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYS 280
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P+FP + YS IPE+ P G + V+A D D N++++++
Sbjct: 431 PLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLISVTAHDPDCEENAQITYS 490
Query: 146 ELE 148
E
Sbjct: 491 LAE 493
>gi|73957354|ref|XP_546896.2| PREDICTED: cadherin-8 isoform 1 [Canis lupus familiaris]
Length = 799
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE +GT V V+A+DAD G ++KL
Sbjct: 146 PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKL 205
Query: 143 SWNELEPNGLFS 154
++ LE FS
Sbjct: 206 VYSILEGQPYFS 217
>gi|410913715|ref|XP_003970334.1| PREDICTED: uncharacterized protein LOC101073688 [Takifugu rubripes]
Length = 3967
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 61 LKRAL---RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK++L ++++H L V T G P P GT N ++IV D NDN P+F Y + I
Sbjct: 3376 LKKSLDREKSKQHSLLV--TAVDGGKP-PRSGTLNISVIVLDNNDNRPVFIKDTYQIEIN 3432
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E+VP GT + V A D D G N ++ +
Sbjct: 3433 ENVPAGTTITTVKAIDPDEGSNGEVEY 3459
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L EE H L V T G P GT N +IIV D NDN P F Y + I
Sbjct: 2572 LKKQLDREEKQKHSLVV--TAVDGGKP-QRSGTLNVSIIVLDNNDNRPQFTKDTYQVEIY 2628
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+VPVGT V VSA D D G N ++ ++
Sbjct: 2629 ENVPVGTTVTKVSAIDPDEGANGEIEYS 2656
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L EE H L V T G P GT N +IIV D NDN P+F Y + I
Sbjct: 196 LKKQLDREEKQKHSLVV--TAVDGGKP-QRSGTLNVSIIVLDINDNRPVFIKDTYQVEIF 252
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E+ PVGT V VSA D D G N ++ ++
Sbjct: 253 ENAPVGTTVTKVSAIDPDEGANGEIEYS 280
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 61 LKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDV 120
LK L EE + + + PL G C + ++D NDN P V+ S ++PED
Sbjct: 3484 LKGVLDFEETSIYKLDIEASDKGTPPLTGGCRVIVKIKDVNDNPPEIEVTSLSNTVPEDS 3543
Query: 121 PVGTVVQVVSASDADLGVNSKL 142
GTV+ ++S SD D GVN K+
Sbjct: 3544 KPGTVISLISVSDKDSGVNGKI 3565
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPED 119
T+K + EE+ + + + PL G C I + D NDN P V+ S ++PED
Sbjct: 1083 TVKGTVDYEENEIYKLDVEASDKGTPPLTGECRVIIKIIDVNDNPPEIEVTSLSNTVPED 1142
Query: 120 VPVGTVVQVVSASDADLGVNSKL 142
GTV+ ++S SD D GVN K+
Sbjct: 1143 SKPGTVISLISVSDKDSGVNGKI 1165
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
+E + L +E T KG+ PL C + ++D NDN P V+ S ++PED GTV+
Sbjct: 313 SETYRLDIEATD-KGT--PPLTSRCRVIVKIKDVNDNAPEIEVTSLSNTVPEDSKPGTVI 369
Query: 127 QVVSASDADLGVNSKL 142
++S SD D GVN K+
Sbjct: 370 SLISVSDKDSGVNGKI 385
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 61 LKRALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LK+ L E +H L V T G P P G N TI V D NDN PIF Y +SI
Sbjct: 976 LKKTLDREHKDKHKLIV--TAVDGGKP-PRSGALNVTISVLDSNDNRPIFNQEIYQISIK 1032
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSW 144
E++ GT V + ASD D G N ++ +
Sbjct: 1033 ENIKAGTSVFRLLASDPDEGSNGEIEY 1059
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 77 TKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL 136
T G P P GT I V D NDN P+F YS I E+VP GT + V+A+D D
Sbjct: 1770 TALDGGKP-PKSGTMEIMIDVLDVNDNAPVFTKDAYSTEINENVPPGTTIIRVNATDMDD 1828
Query: 137 GVNSKLSWN 145
G+N +S++
Sbjct: 1829 GLNGDVSYS 1837
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 67 TEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVV 126
+E + L +E KG+ P C + ++D NDN P V+ S ++PED GTV+
Sbjct: 2689 SETYKLDIE-ASDKGT--PPFRSRCRVIVKLKDINDNAPEIEVTSLSNTVPEDSKPGTVI 2745
Query: 127 QVVSASDADLGVNSKL 142
++S SD D GVN K+
Sbjct: 2746 SLISVSDKDSGVNRKI 2761
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 82 SNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVN 139
S P PL + T+ ++D NDN+PI V+ S I ED +GT V ++S +D D G+N
Sbjct: 1881 SGPVPLRTDKSITVKIKDVNDNSPIIEVTSLSNKISEDSRLGTTVALISITDLDSGIN 1938
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS----KLSWN 145
I V D ND++P FP S L I E GT Q+ +A D D G+NS KLS N
Sbjct: 1678 IEVLDVNDHSPSFPESSKRLEISESTLSGTKFQLQAALDPDSGLNSVQQYKLSQN 1732
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 550 VFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 609
Query: 146 ELEPNGLFSSD 156
++ + LF D
Sbjct: 610 QVSDHSLFGLD 620
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 1330 VFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 1389
Query: 146 ELEPNGLFSSD 156
++ + LF D
Sbjct: 1390 QVSDHSLFGLD 1400
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 2110 VFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 2169
Query: 146 ELEPNGLFSSD 156
++ + LF D
Sbjct: 2170 QVSDHSLFGLD 2180
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 2926 VFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 2985
Query: 146 ELEPNGLFSSD 156
++ + LF D
Sbjct: 2986 QVSDHSLFGLD 2996
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 95 IIVEDQNDNNPI--FPVSQYSLS-----IPEDVPVGTVVQVVSASDADLGVNSKL--SWN 145
+ + DQNDN P+ +PVS + IP +V G +V V A DAD+G N L S
Sbjct: 3733 VFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQ 3792
Query: 146 ELEPNGLFSSD 156
++ + LF D
Sbjct: 3793 QVSDHSLFGLD 3803
>gi|296531412|ref|NP_001076036.2| protocadherin gamma-A12 [Pan troglodytes]
Length = 934
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 61 LKRALRTEE---HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIP 117
LKRAL EE H L + T G +P GT ++V D NDN P F +Y S+P
Sbjct: 198 LKRALDREEKAAHHLVL--TASDGGDP-VRTGTARIRVMVLDANDNAPAFAQPEYRASVP 254
Query: 118 EDVPVGTVVQVVSASDADLGVNSKLSWN 145
E++ +GT + VV+A+D D GVN+++ ++
Sbjct: 255 ENLALGTQLLVVNATDPDEGVNAEVRYS 282
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
PL + ++ V D NDN P+FP + YS IPE+ P G + V+A D D N++++++
Sbjct: 433 PLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYS 492
Query: 146 ELE 148
E
Sbjct: 493 LAE 495
>gi|170067416|ref|XP_001868472.1| cadherin [Culex quinquefasciatus]
gi|167863548|gb|EDS26931.1| cadherin [Culex quinquefasciatus]
Length = 948
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGP-LVGTCNTTIIVEDQNDNN 104
F +P T + + L R R E + L++ T G P L + V+D NDN
Sbjct: 708 FRVDPETGVLSVIAPLDRE-RQEIYELRIRATDGGGDQSTPALFSEALVRVTVDDINDNA 766
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
P F + S+ I EDVP GTVV VVSA D D G +S++ ++
Sbjct: 767 PEFSIQDLSVRIREDVPKGTVVMVVSAVDLDSGPSSEILYS 807
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
+ I V+D NDN+PIF ++ ++ + E+ P GT V V+A D DLG N+ +S++
Sbjct: 274 SAKVKINVQDTNDNDPIFEINNMTIKVDENEPAGTTVTKVTARDKDLGENAYISYS 329
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P K +G L R R +E++L + T + P + I V D+NDN P
Sbjct: 605 FRLDPDNGELKIIGYLDRE-RRDEYFLNI--TVYDLGKPQKSISKV-LPITVLDENDNVP 660
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSD 156
F S S + E+ GT++ V+A+DADLG N+K++++ + F D
Sbjct: 661 RFEKSLASFRVTENALNGTIIFRVNATDADLGNNAKVTYSLITDTKDFRVD 711
>gi|148676980|gb|EDL08927.1| mCG123390, isoform CRA_a [Mus musculus]
Length = 769
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 58 VGTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQY 112
G ++ AL +E + V K G G L GT I + D NDN P FP +
Sbjct: 196 TGIIRTALPNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTI 255
Query: 113 SLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
L + E PVGT V V A+DAD G N+++ + ++ +G D+ E
Sbjct: 256 HLRVLESSPVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITE 303
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 129 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 188
Query: 152 LFS 154
FS
Sbjct: 189 YFS 191
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I +ED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 344 GPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 393
>gi|109076806|ref|XP_001082276.1| PREDICTED: cadherin-12-like [Macaca mulatta]
gi|355749838|gb|EHH54176.1| Brain cadherin [Macaca fascicularis]
Length = 794
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|332836068|ref|XP_003313012.1| PREDICTED: protocadherin-16 [Pan troglodytes]
Length = 3305
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 GTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPE 118
GT++ R E ++ G P L T T+ V D ND+ P FPV YS+ +PE
Sbjct: 1820 GTMRPLDREVEPAFQLRIEAWDGGQPA-LSATLLLTVTVLDANDHAPAFPVPAYSVEVPE 1878
Query: 119 DVPVGTVVQVVSASDADLGVNSKLSW 144
DVP GT++ + A D D G N +++
Sbjct: 1879 DVPAGTLLLQLQAHDPDAGANGHVTY 1904
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWNELEPNGLFSSD 156
NDN P+F + Y +++PED PVG + V ASDAD G + + + + +P+GLF D
Sbjct: 2603 NDNPPVFTRASYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELD 2660
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P ++++D NDN+P FP + ++ +P + GT + + A D D GVNS
Sbjct: 880 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 939
Query: 141 KLSWNELEPNG 151
++++ L G
Sbjct: 940 RVTFTLLAGGG 950
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 53 RLYKNVGTLK--RALRTE---EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107
RL+ + G L R L E EH L V + H GS P T T+ V D ND P F
Sbjct: 1605 RLHSSTGALSVVRPLDREQRAEHVLTVVASDH-GSPPRS--ATQVLTVSVADVNDEAPTF 1661
Query: 108 PVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
+YS+ + E+ P GT + + A+D D+G N ++++
Sbjct: 1662 QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY 1698
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 42 SIAKFIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQN 101
S F +P T V T RAL EE + + P + + VED+N
Sbjct: 1702 SSESFSLDPDT----GVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDEN 1757
Query: 102 DNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNEL--EPNGLFSSDL 157
D+ P F + SL +PE T+ ++ ASD D+G N +L + L +P+G F DL
Sbjct: 1758 DHAPTFGSAHLSLEVPEGQDPQTLT-MLRASDPDVGANGQLQYRILDGDPSGAFVLDL 1814
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 94 TIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELE 148
TI V+D ND+ P FP++ S S+ E+ P GT+V + A D D G +L ++ LE
Sbjct: 2700 TIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLE 2754
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
G L + + D+NDN P F +Y+ SI P GT V + A D D G + +LS+
Sbjct: 675 GGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGSHGRLSY 734
Query: 145 NELEPNG--LFSSD-----LRVEWVINRSVD 168
+ L N LF+ D L V W + R +
Sbjct: 735 HILAGNSPPLFTLDEQSGLLTVAWPLARRAN 765
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +PT+ + +L L + V G P PL + + ++D NDN P
Sbjct: 533 FSIDPTSGIITTAASLDYELEPQPQLTVVAT---DGGLP-PLASSATVNVALQDVNDNEP 588
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145
F + Y+ S+PE GT V+A+DAD G LS++
Sbjct: 589 QFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYS 628
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
++DQND+ P F +S Y +++ ED+P G+ + + A+DAD
Sbjct: 2479 LQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDAD 2517
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 87 LVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE 146
LVG+ T++V D NDN P P + L + ED +G+ + V+ +D D G + W
Sbjct: 2269 LVGSATLTVMVIDTNDNRPTIP-QPWELRVSEDALLGSEIAQVTGNDVDSG---PVLWYV 2324
Query: 147 LEPNG 151
L P+G
Sbjct: 2325 LSPSG 2329
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV----VQVVSASDADL 136
G+ GPL T + TI V D ND+ P FP S L +P P + + + A D D
Sbjct: 1946 GAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLRAEDRDA 2005
Query: 137 GVNSKL 142
G N+ +
Sbjct: 2006 GANASI 2011
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F +P T + TL R ++ L + GS P GT + ++ D NDN+P
Sbjct: 1166 FRIHPQTGEVTTLQTLDREQQSSYQLLV--QVQDGGSPPRSTTGTVHVAVL--DLNDNSP 1221
Query: 106 IFPVSQ------YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG-LFS 154
F + + +P+ VP GT+V + A D D G N + + P LFS
Sbjct: 1222 TFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFS 1277
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
GS P + T++ D ND+ P F S+Y + E + G+ V V ASDAD GVN
Sbjct: 243 GSPPRRAQALLDVTLL--DINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNG 300
Query: 141 KLSWN----ELEPNGLFSSD 156
+++ + E +G FS D
Sbjct: 301 AVTYEINRRQSEGDGPFSID 320
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 97 VEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSW 144
V D+NDN P+F S + +PED P G V A D DLG +++S+
Sbjct: 1548 VTDENDNAPVF-ASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSY 1594
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 68 EEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQ 127
E + LKV + G GT + + +QN+++P L++ E+ P GT V
Sbjct: 1078 ELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVG 1137
Query: 128 VVSASDADLGVNSKLSWN 145
V A+D D G N +L+++
Sbjct: 1138 RVFATDRDSGPNGRLTYS 1155
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 105 PIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS-KLSWNELEPNGLFSSD 156
PIF QY S+PEDV GT V +V A + + LS + +P GLFS D
Sbjct: 800 PIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLAPVTLSLSGGDPRGLFSLD 852
>gi|327280220|ref|XP_003224850.1| PREDICTED: cadherin-20-like [Anolis carolinensis]
Length = 815
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E++ + K G G L GT I + D NDN P FP Y
Sbjct: 222 GLIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTIVNISLSDVNDNPPRFPQKHYQ 281
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVE 160
+S+ E PV + V V A D D G+N+++ ++ ++ +GL D+ +
Sbjct: 282 MSVLESAPVSSTVGRVLAKDLDEGINAEMKYSFVDGDGLDVFDITTD 328
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 60 TLKRALRTEEHWLKVENTKHKGSNP---------GPLVGTCNTTIIVEDQNDNNPIFPVS 110
T+++ L E K K +G+NP GP T I VED D P+F S
Sbjct: 337 TVRKPLSFESK--KTYTLKVEGANPHLEMRFLNLGPFRDTATVHITVEDV-DEPPVFEPS 393
Query: 111 QYSLSIPEDVPVGTVVQVVSASDADLGVNS 140
Y + +PEDV +GT +Q++ A D D NS
Sbjct: 394 IYFVEVPEDVDIGTTIQIIHAKDPDATNNS 423
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 46 FIANPTTRLYKNVGTLKRALRTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105
F + TT + L R R++ + L+ + + P + I ++D NDN P
Sbjct: 108 FTIDDTTGDIHAIQRLDREERSQ-YTLRAQALDRRTGRP--MEPESEFIIKIQDINDNEP 164
Query: 106 IFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFSSDLR 158
F Y S+PE PVGT V V+A+DAD G ++++ ++ L+ FS D R
Sbjct: 165 KFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSR 220
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 48 ANPTTRLYKNVGT----LKRALRTEE-HWLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102
++P Y ++ T R L E+ W + H+ ++P VG+ + TI V D ND
Sbjct: 432 SDPGRFFYVDIATGALMTARPLDREDISWHNITVLAHELNSPSH-VGSVSVTIRVLDVND 490
Query: 103 NNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
N P FP Y + E+ G ++Q VSA D D
Sbjct: 491 NAPEFP-RFYEAFVCENAKAGQLIQTVSAVDQD 522
>gi|114600892|ref|XP_517720.2| PREDICTED: cadherin-12 isoform 2 [Pan troglodytes]
Length = 794
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 59 GTLKRAL-----RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYS 113
G ++ AL +E + + K G G L GT I + D NDN P FP S +
Sbjct: 216 GVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFH 275
Query: 114 LSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNG 151
L +PE P+G+ + + A D D G N+++ +N + +G
Sbjct: 276 LKVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDG 313
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 56 KNVGTLKRALRTE---EHWLKVENT----KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFP 108
+ V LK+ L E + KVE + H+ + GP T I V D D P+F
Sbjct: 327 EGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-DEPPVFS 385
Query: 109 VSQYSLSIPEDVPVGTVVQVVSASDADLG 137
Y++ + ED PVGT++ V+A D D+G
Sbjct: 386 KPLYTMEVYEDTPVGTIIGAVTAQDLDVG 414
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 86 PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKL 142
PL I V+D NDN P F Y ++PE PVG V V A+DAD G ++++
Sbjct: 139 PLEPESEFIIKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARV 198
Query: 143 SWNELEPNGLFSSD 156
++ L+ FS D
Sbjct: 199 VYSILQGQPYFSID 212
>gi|85662402|ref|NP_001034243.1| cadherin-8 isoform 1 precursor [Mus musculus]
gi|26350237|dbj|BAC38758.1| unnamed protein product [Mus musculus]
gi|34785833|gb|AAH57581.1| Cadherin 8 [Mus musculus]
Length = 716
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 66 RTEEHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTV 125
+E +L V K G + G L GT T+ + D NDN P F S Y S+PEDV +GT
Sbjct: 235 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 294
Query: 126 VQVVSASDADLGVNSKLSWNELEPNG 151
+ V A+D D+G N++ S++ ++ +G
Sbjct: 295 IGRVKANDQDIGENAQSSYDIIDGDG 320
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57 NVGTLKRALRTE--EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL 114
++ +KR R E E+ L + + + P L I V+D NDN P F Y
Sbjct: 117 DIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPPSEFIIKVQDINDNAPEFLNGPYHA 174
Query: 115 SIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNGLFS 154
++PE +GT V V+A+DAD G ++KL ++ LE FS
Sbjct: 175 TVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFS 217
>gi|126320877|ref|XP_001364775.1| PREDICTED: cadherin-10 [Monodelphis domestica]
Length = 788
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 69 EHWLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV 128
E + V K G G L GT I + D NDN P F + L +PE PVGT +
Sbjct: 231 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFSQNTIHLRVPESSPVGTAIGS 290
Query: 129 VSASDADLGVNSKLSWNELEPNG 151
V A+DAD G N+++ + ++ +G
Sbjct: 291 VKATDADTGKNAEIEYRIIDGDG 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151
I + D NDN P FP Y+ S+PE VGT V V+A+DAD G ++++ ++ L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 152 LFS 154
FS
Sbjct: 208 YFS 210
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 85 GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD 135
GP T I VED D P+F S Y + ED+ VGT++ V A D D
Sbjct: 363 GPFKDTTIVKISVEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPD 412
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,920,598,326
Number of Sequences: 23463169
Number of extensions: 118338338
Number of successful extensions: 239445
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6620
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 192213
Number of HSP's gapped (non-prelim): 45141
length of query: 173
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 41
effective length of database: 9,262,057,059
effective search space: 379744339419
effective search space used: 379744339419
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)