Query psy8644
Match_columns 173
No_of_seqs 190 out of 1160
Neff 8.5
Searched_HMMs 29240
Date Sat Aug 17 00:07:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qvi_A Cadherin-2; beta barrel 100.0 4.3E-34 1.5E-38 219.3 15.8 155 10-172 2-183 (215)
2 3qrb_A Cadherin-1; cell adhesi 100.0 1.2E-33 4E-38 216.4 16.4 156 10-173 2-185 (213)
3 2a4e_A Cadherin-11; dimer, cal 100.0 3.1E-33 1.1E-37 214.5 18.5 156 9-172 2-177 (215)
4 3k5r_A Cadherin 13; mouse, str 100.0 4.7E-32 1.6E-36 208.2 16.5 154 9-171 2-184 (218)
5 3ppe_A Vascular endothelial ca 100.0 7.1E-32 2.4E-36 205.2 16.9 153 10-173 2-174 (203)
6 3lnd_A CDH6 protein, cadherin 100.0 1.1E-32 3.6E-37 210.3 10.0 155 10-172 2-176 (207)
7 3mvs_A Cadherin-23, otocadheri 100.0 4.1E-31 1.4E-35 201.9 16.6 147 15-172 17-175 (210)
8 2a62_A Cadherin-8; extracellul 100.0 3.2E-30 1.1E-34 208.6 12.9 154 14-173 112-288 (322)
9 3q2w_A Cadherin-2; cell adhesi 100.0 1.2E-29 4E-34 218.5 15.7 156 10-173 2-184 (559)
10 2a62_A Cadherin-8; extracellul 100.0 2.2E-30 7.7E-35 209.5 10.6 155 10-172 2-176 (322)
11 2x2u_A Proto-oncogene tyrosine 100.0 4.2E-31 1.4E-35 206.4 4.4 152 15-172 10-206 (246)
12 1l3w_A EP-cadherin, C-cadherin 100.0 1.1E-28 3.6E-33 212.0 16.8 155 10-172 8-190 (546)
13 3q2v_A Cadherin-1; cell adhesi 100.0 1.1E-28 3.6E-33 212.2 14.3 155 10-172 2-184 (550)
14 3ubf_A Neural-cadherin; cell a 100.0 6E-28 2.1E-32 194.6 15.4 139 24-172 8-174 (316)
15 4apx_B Protocadherin-15, otoca 100.0 1.1E-27 3.6E-32 186.7 15.9 155 14-173 23-206 (242)
16 3ubf_A Neural-cadherin; cell a 100.0 2.8E-27 9.7E-32 190.7 16.9 146 14-172 114-280 (316)
17 1q55_A EP-cadherin, C-cadherin 100.0 1.4E-27 4.9E-32 214.5 16.5 152 13-172 160-339 (880)
18 3ubh_A Neural-cadherin; cell a 99.9 6.9E-27 2.4E-31 195.0 17.8 146 14-171 225-387 (419)
19 3ubh_A Neural-cadherin; cell a 99.9 1.2E-26 4.2E-31 193.4 17.9 140 24-172 13-179 (419)
20 1l3w_A EP-cadherin, C-cadherin 99.9 9.4E-27 3.2E-31 199.9 15.1 152 14-172 120-299 (546)
21 3q2v_A Cadherin-1; cell adhesi 99.9 2E-26 6.8E-31 198.0 14.6 153 14-173 114-294 (550)
22 3q2w_A Cadherin-2; cell adhesi 99.9 2.8E-26 9.5E-31 197.5 14.4 153 15-173 115-297 (559)
23 1q55_A EP-cadherin, C-cadherin 99.9 8.2E-26 2.8E-30 203.1 14.4 152 14-172 269-448 (880)
24 2ee0_A Protocadherin-9; Ca dom 99.9 1.2E-22 4.2E-27 140.9 4.0 78 95-172 2-85 (114)
25 2yst_A Protocadherin-7; BH-PCD 99.8 5.3E-22 1.8E-26 138.6 3.5 78 95-172 2-84 (119)
26 1ncg_A N-cadherin; cell adhesi 99.8 5.3E-20 1.8E-24 126.8 7.9 92 8-107 2-110 (110)
27 2yqg_A Desmoglein-2, HDGC; cad 99.8 2.3E-19 8E-24 126.0 6.1 93 9-109 11-122 (123)
28 2yst_A Protocadherin-7; BH-PCD 99.7 3.1E-17 1.1E-21 114.3 9.4 84 14-105 20-119 (119)
29 2x2u_A Proto-oncogene tyrosine 99.7 4.4E-16 1.5E-20 121.3 10.1 88 14-108 145-245 (246)
30 1wyj_A Protocadherin beta 14; 99.6 8.1E-17 2.8E-21 113.3 2.4 97 9-115 9-123 (125)
31 2omz_B Epithelial-cadherin; le 99.6 2.5E-15 8.7E-20 102.5 7.4 85 8-100 4-105 (105)
32 1zvn_A Mn-cadherin; strand dim 99.6 1.1E-14 3.6E-19 98.4 9.7 83 9-99 2-99 (99)
33 1zxk_A Cadherin-8; strand dime 99.6 2E-14 6.7E-19 96.9 9.1 82 10-99 2-98 (98)
34 3mvs_A Cadherin-23, otocadheri 99.5 7.5E-14 2.6E-18 106.1 10.9 83 14-104 115-210 (210)
35 2a4e_A Cadherin-11; dimer, cal 99.5 7.7E-14 2.6E-18 106.5 10.7 87 14-106 113-215 (215)
36 2ee0_A Protocadherin-9; Ca dom 99.5 1.6E-13 5.5E-18 94.7 10.8 78 14-101 20-114 (114)
37 3k6f_A T-cadherin; cell adhesi 99.5 1.8E-13 6.1E-18 92.4 9.5 79 9-99 2-100 (100)
38 3k6d_A T-cadherin; cell adhesi 99.5 5.5E-13 1.9E-17 89.8 9.9 81 10-99 2-99 (99)
39 3k6i_A T-cadherin; cell adhesi 99.4 1E-12 3.4E-17 88.5 10.4 78 10-99 2-99 (99)
40 1zvn_A Mn-cadherin; strand dim 99.4 1.5E-13 5.1E-18 92.7 5.3 60 112-173 6-70 (99)
41 2yqg_A Desmoglein-2, HDGC; cad 99.4 2.4E-14 8.3E-19 100.2 1.3 72 100-172 5-83 (123)
42 1zxk_A Cadherin-8; strand dime 99.4 2.1E-13 7.1E-18 91.8 5.2 60 112-173 5-69 (98)
43 3k6d_A T-cadherin; cell adhesi 99.3 1.8E-12 6E-17 87.4 3.8 58 112-173 5-71 (99)
44 3k6i_A T-cadherin; cell adhesi 99.2 1E-11 3.4E-16 83.6 5.6 57 113-173 6-71 (99)
45 3k6f_A T-cadherin; cell adhesi 99.2 8.4E-12 2.9E-16 84.1 4.9 57 113-173 7-72 (100)
46 1ncg_A N-cadherin; cell adhesi 99.2 2E-11 6.7E-16 83.7 4.7 59 111-172 6-73 (110)
47 1wyj_A Protocadherin beta 14; 99.2 4.1E-12 1.4E-16 89.1 1.0 62 109-172 10-77 (125)
48 3qrb_A Cadherin-1; cell adhesi 99.2 2.7E-10 9.1E-15 86.5 10.5 80 14-99 114-213 (213)
49 2omz_B Epithelial-cadherin; le 99.1 1.9E-11 6.5E-16 83.1 3.6 58 113-173 10-76 (105)
50 3ppe_A Vascular endothelial ca 99.1 4.9E-10 1.7E-14 84.5 11.1 79 14-99 110-203 (203)
51 1wuz_A Pcdha4 protein, CNR-EC1 99.1 2.9E-12 1E-16 86.9 -2.4 62 110-172 3-69 (103)
52 3lnd_A CDH6 protein, cadherin 99.1 8.9E-10 3E-14 83.3 10.6 81 14-99 112-207 (207)
53 1wuz_A Pcdha4 protein, CNR-EC1 99.1 3.8E-11 1.3E-15 81.3 2.3 81 13-103 5-103 (103)
54 4apx_B Protocadherin-15, otoca 99.0 5.6E-10 1.9E-14 86.5 8.1 78 15-99 134-237 (242)
55 3k5r_A Cadherin 13; mouse, str 99.0 2.8E-09 9.7E-14 81.0 10.6 82 14-99 114-218 (218)
56 2qvi_A Cadherin-2; beta barrel 99.0 1.3E-09 4.3E-14 83.0 8.3 81 14-99 114-215 (215)
57 3ead_A Na/Ca exchange protein; 83.7 8.4 0.00029 26.3 9.7 35 9-43 8-43 (137)
58 3us9_A Sodium/calcium exchange 78.8 21 0.00072 27.8 13.2 128 9-145 13-178 (295)
59 3rb5_A Na/Ca exchange protein; 76.7 24 0.00084 27.4 14.1 129 9-145 13-160 (298)
60 1op4_A Neural-cadherin; beta s 65.7 12 0.00041 26.5 5.1 62 101-166 30-92 (159)
61 1pby_A Quinohemoprotein amine 53.5 44 0.0015 27.9 7.1 51 47-105 429-487 (489)
62 2yrl_A KIAA1837 protein; PKD d 50.3 41 0.0014 21.5 5.4 27 71-102 72-98 (102)
63 3gin_A Sodium/calcium exchange 41.8 87 0.003 21.8 8.2 34 10-43 27-62 (160)
64 2kpn_A Bacillolysin; solution 41.4 46 0.0016 21.6 4.5 38 63-105 51-91 (103)
65 3pdd_A Glycoside hydrolase, fa 40.2 98 0.0033 22.0 7.6 63 71-145 64-130 (190)
66 1op4_A Neural-cadherin; beta s 32.1 1.3E+02 0.0045 21.1 9.7 51 23-78 53-108 (159)
67 2yhg_A SDE_182CT, cellulose-bi 32.0 2.1E+02 0.0073 23.5 10.8 55 36-97 369-436 (437)
68 3gin_A Sodium/calcium exchange 26.7 79 0.0027 22.1 4.1 53 90-145 9-61 (160)
69 3e9t_A Na/Ca exchange protein; 22.8 1.6E+02 0.0054 18.9 8.4 24 6-29 3-26 (114)
No 1
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=4.3e-34 Score=219.28 Aligned_cols=155 Identities=21% Similarity=0.288 Sum_probs=137.7
Q ss_pred eeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-...++|+|+.. ..+.++|+|.+. |+.|+|+| +.|+|++.+|.|++. ++||||.. .|
T Consensus 2 w~~~~~~V~En~~g~~~~~v~~~~~D~~~-n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l 76 (215)
T 2qvi_A 2 WVIPPINLPENSRGPFPQELVRIRSDRDK-NLSLRYSVTGPGADQPPTGIFIINPISGQLSVT----KPLDRELIARFHL 76 (215)
T ss_dssp CCCCCEEEESSCCCCSSEEEEECCCGGGG-TSCEEEEEESTTSSSTTCSSEEECTTTCEEEEC----SCCCTTTCSEEEE
T ss_pred cccCcEEEcCCCCCCCCEEEEEEeCCCCC-CceEEEEEECCCCCCCCCCcEEEeCCccEEEEC----cccCcccCCeEEE
Confidence 5556788898775 346778888875 89999999 279999999999999 99999998 89
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEE--eCC
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL--GVNSKLSWN--ELE 148 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~v~Y~--~~~ 148 (173)
.|+|+ |.|. | ++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. |.|+.++|+ .++
T Consensus 77 ~v~a~-D~g~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~ 153 (215)
T 2qvi_A 77 RAHAV-DING-N-QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQA 153 (215)
T ss_dssp EEEEE-ETTT-C-CCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECS
T ss_pred EEEEE-ECCC-C-ceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCC
Confidence 99999 6776 6 789999999999999999999999999999999999999999999999999 789999999 333
Q ss_pred ----CCCcEEEECCCCEEE-e-cCCccccc
Q psy8644 149 ----PNGLFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 149 ----~~~~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
..+.|.|++.+|.|+ . ++||||+.
T Consensus 154 ~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~ 183 (215)
T 2qvi_A 154 PSTPSPNMFTINNETGDIITVAAGLDREKV 183 (215)
T ss_dssp SCCSSTTCEEECTTTCEEEECSCCCCTTTC
T ss_pred CCCCcCCeEEEcCCCcEEEEecCCCCcccC
Confidence 468999999999997 3 78999975
No 2
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.2e-33 Score=216.41 Aligned_cols=156 Identities=21% Similarity=0.271 Sum_probs=137.1
Q ss_pred eeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE-e---------eEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI-A---------KFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi-~---------~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-...++|+|+.. +.+.++++|.+. |+.++|+| + +|.|++.||.|++. ++||||.. .|
T Consensus 2 wv~~~~~V~En~~~~~~~~v~~v~aD~d~-n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l 76 (213)
T 3qrb_A 2 WVIAAISCPENEKGEFPKNLVQIKSNRDK-ETKVFYSITGQGADKPPVGVFIIERETGWLKVT----QPLDREAIAKYIL 76 (213)
T ss_dssp CCEEEEEEETTCCSSSSEEEEECCCGGGG-TSCEEEEEESBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCSEEEE
T ss_pred cccCCEEEeCCCCCCCCcEEEEEEECCCC-CceEEEEEEcCCCCCCCCCeEEEECCCCEEEEC----CccCcccCceEEE
Confidence 4556888898776 337778887665 88999999 2 89999999999999 99999998 89
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEE--eC
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG---VNSKLSWN--EL 147 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~--~~ 147 (173)
.|.|+ |.|. | ++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|.| .|+.++|+ .+
T Consensus 77 ~v~a~-D~~~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~ 153 (213)
T 3qrb_A 77 YSHAV-SSNG-E-AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ 153 (213)
T ss_dssp EEEEE-ETTS-C-BCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEE
T ss_pred EEEEE-eCCC-C-cccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccC
Confidence 99999 6665 5 7889999999999999999999999999999999999999999999999999 89999999 22
Q ss_pred C----CCCcEEEECCCCEEE-e-cCCcccccC
Q psy8644 148 E----PNGLFSSDLRVEWVI-N-RSVDQHTNK 173 (173)
Q Consensus 148 ~----~~~~F~Id~~tG~i~-~-~~LD~E~~~ 173 (173)
+ ..++|.|++.+|.|+ . ++||||+++
T Consensus 154 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~ 185 (213)
T 3qrb_A 154 DPELPHKNMFTVNRDTGVISVLTSGLDRESYP 185 (213)
T ss_dssp ESCCSCSCSEEECTTTCEEEECSSCCCTTTCC
T ss_pred CCCCCcCCeEEEECCCcEEEEccCCCCCccCc
Confidence 2 467999999999997 4 789999753
No 3
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=3.1e-33 Score=214.53 Aligned_cols=156 Identities=27% Similarity=0.394 Sum_probs=134.3
Q ss_pred ceeeeeeEEeccCC---Cc-E--EEEcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 9 GYEYNHWSISKLLE---SR-Y--LHLRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 9 ~~~~~~~~i~e~~~---~~-v--~~~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
.|....+.+.|+.. +. + ++.|+|.+ ++.|+|+| .+|+|++.+|.|++. ++||||.. .|.
T Consensus 2 ~w~~~~~~v~En~~~p~~~~v~~va~D~D~g--n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~ 75 (215)
T 2a4e_A 2 GWVWNQFFVIEEYTGPDPVLVGRLHSDIDSG--DGNIKYILSGEGAGTIFVIDDKSGNIHAT----KTLDREERAQYTLM 75 (215)
T ss_dssp CSCCCEEEEETTCCSSSCEEEEECCCTTCCS--SSCEEEEEEETTBTTTEEECTTTCEEEEC----SCCCTTTCSEEEEE
T ss_pred CcEEeeEEEeccCCCCCCEEEEEEEECCCCC--CCeEEEEEECCCCCCeEEEECCceEEEEC----CccCCccCCEEEEE
Confidence 57788899999832 22 2 23467766 68999999 489999999999999 99999998 899
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEeCCCC
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL---GVNSKLSWNELEPN 150 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~v~Y~~~~~~ 150 (173)
|+|+ |.|..+ ++++.+.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|++|.|+|+|. |.|+.++|+...+.
T Consensus 76 v~a~-D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~ 153 (215)
T 2a4e_A 76 AQAV-DRDTNR-PLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ 153 (215)
T ss_dssp EEEE-ETTTCC-EEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST
T ss_pred EEEE-ECCCCC-cccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC
Confidence 9999 555314 688999999999999999999999999999999999999999999999997 88999999933345
Q ss_pred CcEEEECCCCEEE-e-cCCccccc
Q psy8644 151 GLFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 151 ~~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
++|.|++.+|.|+ . ++||||++
T Consensus 154 ~~F~Id~~tG~I~~~~~~LD~E~~ 177 (215)
T 2a4e_A 154 PYFSVEAQTGIIRTALPNMDREAK 177 (215)
T ss_dssp TTEEECTTTCEEEECSSCCCSSSC
T ss_pred CcEEEeCCccEEEEcccCCCcccC
Confidence 7999999999997 5 89999975
No 4
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.7e-32 Score=208.17 Aligned_cols=154 Identities=28% Similarity=0.301 Sum_probs=133.9
Q ss_pred ceeeeeeEEeccCCCc----EEEEcCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---E
Q psy8644 9 GYEYNHWSISKLLESR----YLHLRPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---W 71 (173)
Q Consensus 9 ~~~~~~~~i~e~~~~~----v~~~d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~ 71 (173)
.|-.+.++|+|+...+ +.++.+++. ...++|+| ++|.|++.+|.|++. ++||||.. .
T Consensus 2 ~w~~~~~~V~En~~~g~~~~v~~v~a~D~--d~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~ 75 (218)
T 3k5r_A 2 GIVVSPILIPENQRQPFPRDVGKVVDSDR--PEGSKFRLTGKGVDQDPKGTFRINENTGSVSVT----RTLDRETIATYQ 75 (218)
T ss_dssp CCBCCCEEEETTCCSSCCEEEEECBCTTC--CTTCEEEEEEBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCSEEE
T ss_pred CcccCcEEEecCCCCCCCEEEEEEEecCC--CceEEEEEEcCCCCCCCCCeEEEeCCceEEEEC----CcCCcccCCEEE
Confidence 5667789999987744 555555433 23799999 579999999999999 99999998 8
Q ss_pred EEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEE--eC
Q psy8644 72 LKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL--GVNSKLSWN--EL 147 (173)
Q Consensus 72 l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~v~Y~--~~ 147 (173)
|.|.|+ |.|. | ++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. |.|+.++|+ .+
T Consensus 76 l~v~a~-D~g~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~ 152 (218)
T 3k5r_A 76 LYVETT-DASG-K-TLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQ 152 (218)
T ss_dssp EEEEEE-CSSS-C-EEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEE
T ss_pred EEEEEE-ECCC-C-ceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecC
Confidence 999999 7777 6 789999999999999999999999999999999999999999999999999 789999999 22
Q ss_pred CC----CCcEEEECCCCEEE-e---cCCcccc
Q psy8644 148 EP----NGLFSSDLRVEWVI-N---RSVDQHT 171 (173)
Q Consensus 148 ~~----~~~F~Id~~tG~i~-~---~~LD~E~ 171 (173)
.. .++|.|++.+|.|+ . ++||||+
T Consensus 153 ~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~ 184 (218)
T 3k5r_A 153 TPDKPSPNMFYIDPEKGDIVTVVSPALLDRET 184 (218)
T ss_dssp ESCCSCSCSEEECTTTCEEEECSCGGGCCGGG
T ss_pred CCCCCcCCEEEEECCccEEEEeccCCCCCccc
Confidence 22 37899999999997 4 6999998
No 5
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=7.1e-32 Score=205.23 Aligned_cols=153 Identities=23% Similarity=0.287 Sum_probs=130.6
Q ss_pred eeeeeeEEeccCCCc----EEEE--cCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEE
Q psy8644 10 YEYNHWSISKLLESR----YLHL--RPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKV 74 (173)
Q Consensus 10 ~~~~~~~i~e~~~~~----v~~~--d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v 74 (173)
|-.+.+.|.|+...+ +.++ |+|.+. . +|+| ++|.|++.||.|++. ++||||.. .|.|
T Consensus 2 wv~~~~~V~En~~~~~~~~v~~v~~D~D~g~---~-~Y~i~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~v 73 (203)
T 3ppe_A 2 WIWNRMHIREEIDSPLPHHVGKLTSSVGNKN---A-MYIIEGESANTIFKVQGYDGDIYAF----ERLDREKKAEYELTA 73 (203)
T ss_dssp BCCSEEEEETTCCSSSCEEEEECCBCCCCTT---E-EEEEEETTBTTTEEEETTTTEEEES----SCCCTTTCCEEEEEE
T ss_pred ceeccEEEEccCCCCCCEEEEEEEecCCCCC---c-EEEEecCCCCCeEEEECCcCEEEEC----ccccccccceEEEEE
Confidence 566788999987643 3334 455553 2 9999 589999999999999 99999998 9999
Q ss_pred EEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC---CCCCceEEEEeCCCCC
Q psy8644 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD---LGVNSKLSWNELEPNG 151 (173)
Q Consensus 75 ~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D---~g~n~~v~Y~~~~~~~ 151 (173)
.|+ |.|. |.++++.+.+.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+| .|.|+.++|+.....+
T Consensus 74 ~a~-D~g~-~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~ 151 (203)
T 3ppe_A 74 HII-DRRN-NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNE 151 (203)
T ss_dssp EEE-ETTT-TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTT
T ss_pred EEE-ECCC-CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCC
Confidence 999 6665 3257889999999999999999999999999999999999999999999999 4789999999433456
Q ss_pred cEEEECCCCEEE-e-cCCcccccC
Q psy8644 152 LFSSDLRVEWVI-N-RSVDQHTNK 173 (173)
Q Consensus 152 ~F~Id~~tG~i~-~-~~LD~E~~~ 173 (173)
+|.|+ .+|.|+ . ++||||+++
T Consensus 152 ~F~I~-~tG~i~~~~~~LD~E~~~ 174 (203)
T 3ppe_A 152 YFTVD-DSGVIFTARADLDRESQS 174 (203)
T ss_dssp TEEEC-TTSEEEESCSCCCTTTCS
T ss_pred cEEEe-CCeEEEECCcCCCcccCC
Confidence 99999 999997 6 899999753
No 6
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.98 E-value=1.1e-32 Score=210.32 Aligned_cols=155 Identities=25% Similarity=0.390 Sum_probs=126.1
Q ss_pred eeeeeeEEeccCCCc----E--EEEcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEE
Q psy8644 10 YEYNHWSISKLLESR----Y--LHLRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKV 74 (173)
Q Consensus 10 ~~~~~~~i~e~~~~~----v--~~~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v 74 (173)
|-.+.+.+.|+...+ + ++.|+|.| ++.|+|+| .+|.|++.+|.|++. ++||||.. .|.|
T Consensus 2 wi~~~~~v~En~~~~~~~~v~~~a~D~D~g--~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~v 75 (207)
T 3lnd_A 2 WMANQFFLLEEYTGSDYQYVGKLHSDQDRG--DGSLKYILSGDGAGDLFIINENTGDIQAT----KRLDREEKPVYILRA 75 (207)
T ss_dssp ---CCEEEESCBCSSSCEEEEECCCTTCCS--STTBCCCCCSSSBTTTEEECTTTCEEEEC----SCCCGGGCCEEEC--
T ss_pred ccccccEEEeecCCCCCEEEEEEEeCCCCC--CceEEEEEECCCCCCeEEEECCceEEEEC----CCcCcccCCEEEEEE
Confidence 445677888876532 2 34577777 57899999 489999999999999 99999998 8999
Q ss_pred EEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEeCCCCC
Q psy8644 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL---GVNSKLSWNELEPNG 151 (173)
Q Consensus 75 ~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~v~Y~~~~~~~ 151 (173)
+|+ |.|..+ ++++++.+.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. |.|+.++|+.....+
T Consensus 76 ~a~-D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~ 153 (207)
T 3lnd_A 76 QAV-NRRTGR-PVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 153 (207)
T ss_dssp --C-BSSSCC-CCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGG
T ss_pred EEE-ECCCCC-ccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCC
Confidence 999 665315 788999999999999999999999999999999999999999999999998 889999999434457
Q ss_pred cEEEECCCCEEE-e-cCCccccc
Q psy8644 152 LFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 152 ~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
+|.|++.+|.|+ . ++||||+.
T Consensus 154 ~F~Id~~tG~i~~~~~~lD~E~~ 176 (207)
T 3lnd_A 154 YFSVESETGIIKTALLNMDRENR 176 (207)
T ss_dssp GEEECTTTCEEEECCSSCCC--C
T ss_pred CEEEcCCCcEEEECcccCCcccC
Confidence 999999999997 6 89999975
No 7
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=4.1e-31 Score=201.90 Aligned_cols=147 Identities=27% Similarity=0.357 Sum_probs=126.4
Q ss_pred eEEecc--CCCcEEEEcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEeCCCCC
Q psy8644 15 WSISKL--LESRYLHLRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTKHKGSN 83 (173)
Q Consensus 15 ~~i~e~--~~~~v~~~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~dd~g~~ 83 (173)
++|+|+ .++.+..+.+.+.+ ++.++|+| .+|.|++.+|.|++. ++||||.. .|.|.|+ |.|.
T Consensus 17 ~~V~E~~~~Gt~v~~v~A~D~D-~~~~~y~i~~~~~~~~F~Id~~tG~i~~~----~~LD~E~~~~y~l~v~a~-D~~~- 89 (210)
T 3mvs_A 17 LLISEDTPVGSSVTQLLARDMD-NDPLVFGVSGEEASRFFAVEPDTGVVWLR----QPLDRETKSEFTVEFSVS-DHQG- 89 (210)
T ss_dssp EEEETTCCTTCEEEECCEECTT-CCCCEEEEESHHHHHHEEECTTTCEEEES----SCCCTTTCCEEEEEEEEE-CSSC-
T ss_pred EEEeCCCCCCCEEEEEEEEeCC-CCcEEEEEeCCCCCCcEEEeCCCCEEEEC----CccCCcccceEEEEEEEE-eCCC-
Confidence 467775 45555554332222 35689999 689999999999999 99999998 8999999 6655
Q ss_pred CCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEeCCCCCcEEEECCCCEEE
Q psy8644 84 PGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI 163 (173)
Q Consensus 84 p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~~~~~~~~F~Id~~tG~i~ 163 (173)
.+++.+.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+.....++|.|++.+|.|+
T Consensus 90 ----~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~Id~~tG~i~ 165 (210)
T 3mvs_A 90 ----VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFAIDSARGIVT 165 (210)
T ss_dssp ----EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEEECTTTCEEE
T ss_pred ----CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEEEeCCcEEEE
Confidence 3578999999999999999999999999999999999999999999999999999999666678999999999997
Q ss_pred -ecCCccccc
Q psy8644 164 -NRSVDQHTN 172 (173)
Q Consensus 164 -~~~LD~E~~ 172 (173)
.++||||+.
T Consensus 166 ~~~~LD~E~~ 175 (210)
T 3mvs_A 166 VIQELDYEVT 175 (210)
T ss_dssp ECSCCCTTTC
T ss_pred ECCcCCCccc
Confidence 899999975
No 8
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=3.2e-30 Score=208.59 Aligned_cols=154 Identities=27% Similarity=0.443 Sum_probs=130.3
Q ss_pred eeEEeccC--CCcE---EEEcCCC---CCCCCeEEEEE----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEe
Q psy8644 14 HWSISKLL--ESRY---LHLRPKS---GMYAPAFTFSI----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTK 78 (173)
Q Consensus 14 ~~~i~e~~--~~~v---~~~d~d~---~~~n~~i~Ysi----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~d 78 (173)
...++|+. ++.+ .|.|+|. | .|+.++|+| .+|.|++.+|.|++. .+.||||.. .|.|+|+
T Consensus 112 ~~~v~E~~~~gt~v~~v~A~D~D~~~~G-~n~~i~Y~i~~~~~~F~Id~~tG~i~~~---~~~LD~E~~~~y~l~V~a~- 186 (322)
T 2a62_A 112 HATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTA---LPNMDREAKEEYLVVIQAK- 186 (322)
T ss_dssp EEEECSSCCTTCBCCCCCCCBCSCSSST-TSSCEEEEEEECTTTEEECTTTCCEEEC---SSCCCGGGCSEEEEEEEEE-
T ss_pred EEEEeCCCCCCCEEEEEEEEeCCCCCCC-ccEEEEEEEccCCCCEEEecCCCEEEec---ccCCCcccCCeEEEEEEEE-
Confidence 34677754 4443 5567775 4 478999999 789999999999875 378999998 9999999
Q ss_pred CCCCCC-CCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE--eCCCCCcEEE
Q psy8644 79 HKGSNP-GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSS 155 (173)
Q Consensus 79 d~g~~p-~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~--~~~~~~~F~I 155 (173)
|.|. | .++++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+ .++..++|.|
T Consensus 187 D~g~-p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I 265 (322)
T 2a62_A 187 DMGG-HSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEI 265 (322)
T ss_dssp ESCS-SSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCC
T ss_pred ECCC-CCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEE
Confidence 6665 4 2489999999999999999999999999999999999999999999999999999999999 5567899999
Q ss_pred E----CCCCEEE-ecCCcccccC
Q psy8644 156 D----LRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 156 d----~~tG~i~-~~~LD~E~~~ 173 (173)
+ +.+|.|+ .++||||+.+
T Consensus 266 ~~d~~~~tG~i~~~~~LD~E~~~ 288 (322)
T 2a62_A 266 TSDAQAQDGVIRLRKPLDFETKK 288 (322)
T ss_dssp BCCTTTSEEEEEBCSCCCCSSCC
T ss_pred eccCCCceEEEEECCcCCcccCC
Confidence 8 4589997 8999999753
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.97 E-value=1.2e-29 Score=218.49 Aligned_cols=156 Identities=22% Similarity=0.300 Sum_probs=135.9
Q ss_pred eeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-...+.+.|+.. ..+.+++.|.+. |+.|+|+| ++|.|++.+|.|++. ++||||.. .|
T Consensus 2 W~~~~~~v~En~~g~~~~~i~~~~~D~~~-n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~----~~LDrE~~~~y~l 76 (559)
T 3q2w_A 2 WVIPPINLPENSRGPFPQELVRIRSDRDK-NLSLRYSVTGPGADQPPTGIFIINPISGQLSVT----KPLDRELIARFHL 76 (559)
T ss_dssp CCCCCEEEESSCCCCSSEEEEECCCGGGG-TSCEEEEEESBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCSEEEE
T ss_pred ccCCcEEeeCCCCCCCCeEEEEEeeCCCC-CcEEEEEEECCCCCCCCCceEEEeCCceEEEEC----CccCCCCCceEEE
Confidence 5556788888775 345777888775 88999999 279999999999999 99999998 89
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC--CCceEEEE--eCC
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG--VNSKLSWN--ELE 148 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g--~n~~v~Y~--~~~ 148 (173)
.++|. |.|. + ++++++.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+ .+.
T Consensus 77 ~v~a~-D~g~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~ 153 (559)
T 3q2w_A 77 RAHAV-DING-N-QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQA 153 (559)
T ss_dssp EEEEE-ETTS-C-EEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEE
T ss_pred EEEEE-ECCC-C-ccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCC
Confidence 99999 6666 5 7889999999999999999999999999999999999999999999999997 69999999 222
Q ss_pred C----CCcEEEECCCCEEE-ec-CCcccccC
Q psy8644 149 P----NGLFSSDLRVEWVI-NR-SVDQHTNK 173 (173)
Q Consensus 149 ~----~~~F~Id~~tG~i~-~~-~LD~E~~~ 173 (173)
. .++|.|++.+|.|+ .+ +||||+++
T Consensus 154 ~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~ 184 (559)
T 3q2w_A 154 PSTPSPNMFTINNETGDIITVAAGLDREKVQ 184 (559)
T ss_dssp SCCSCTTCEEECTTTCEEEECCSCCCTTTCC
T ss_pred CCCCCcceEEEeCCceEEEEEeccCCcccCC
Confidence 2 37899999999996 55 99999863
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.96 E-value=2.2e-30 Score=209.49 Aligned_cols=155 Identities=26% Similarity=0.343 Sum_probs=131.4
Q ss_pred eeeeeeEEecc--CCCc--E--EEEcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEE
Q psy8644 10 YEYNHWSISKL--LESR--Y--LHLRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKV 74 (173)
Q Consensus 10 ~~~~~~~i~e~--~~~~--v--~~~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v 74 (173)
|-.+.+.+.|+ ...+ + ++.|+|.+ ++.++|+| .+|.|++.+|.|++. ++||||.. .|.|
T Consensus 2 w~~~~~~v~E~~~~~~~~~v~~va~D~D~g--~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~v 75 (322)
T 2a62_A 2 WVWNQMFVLEEFSGPEPILVGRLHTDLDPG--SKKIKYILSGDGAGTIFQINDITGDIHAI----KRLDREEKAEYTLTA 75 (322)
T ss_dssp CCCCCEECCCSCCCSSCEECCCCCCCCCCS--SCCCEEEEEETTBTTTEEEETTTTEEEEC----SCCCTTTCSBCCEEE
T ss_pred cEeceeeeccccCCCCCEEEEEEEEcCCCC--CCEEEEEEECCCCCCcEEEeCCcCEEEEe----ccCCcccccEEEEEE
Confidence 45567777887 2222 2 33467766 57899999 479999999999999 99999998 8999
Q ss_pred EEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEeCCCCC
Q psy8644 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADL---GVNSKLSWNELEPNG 151 (173)
Q Consensus 75 ~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~v~Y~~~~~~~ 151 (173)
+|+ |.|..+ ++++.+.+.|+|.|+|||+|.|....|.++|+|++++|+.|+++.|+|+|. |.|+.++|+.....+
T Consensus 76 ~a~-D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~ 153 (322)
T 2a62_A 76 QAV-DFETNK-PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 153 (322)
T ss_dssp EEE-CTTTCS-EEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTT
T ss_pred EEE-ECCCCC-cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCC
Confidence 999 655413 678899999999999999999999999999999999999999999999996 789999999433458
Q ss_pred cEEEECCCCEEE-e-cCCccccc
Q psy8644 152 LFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 152 ~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
+|.|++.+|.|+ . ++||||++
T Consensus 154 ~F~Id~~tG~i~~~~~~LD~E~~ 176 (322)
T 2a62_A 154 YFSIEPETAIIKTALPNMDREAK 176 (322)
T ss_dssp TEEECTTTCCEEECSSCCCGGGC
T ss_pred CEEEecCCCEEEecccCCCcccC
Confidence 999999999997 5 89999975
No 11
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.96 E-value=4.2e-31 Score=206.44 Aligned_cols=152 Identities=17% Similarity=0.057 Sum_probs=125.3
Q ss_pred eEEecc--CCCcEE---EEcCCCCC-CCCeEE------EEE-----eeEEEECCCcEEEEecCCCCCCcCccc-------
Q psy8644 15 WSISKL--LESRYL---HLRPKSGM-YAPAFT------FSI-----AKFIANPTTRLYKNVGTLKRALRTEEH------- 70 (173)
Q Consensus 15 ~~i~e~--~~~~v~---~~d~d~~~-~n~~i~------Ysi-----~~F~Id~~tG~i~~~~~~~~~LD~E~~------- 70 (173)
.+|+|+ +++.+. |.|+|.+. .+.+|. |+| .+|.|++.||.|++. ++||||..
T Consensus 10 ~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~~~~ 85 (246)
T 2x2u_A 10 EKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQ----RSLDHSSWEKLSVRN 85 (246)
T ss_dssp EEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEES----SCBCHHHHHHHHHTS
T ss_pred EEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEEC----CcCChhHhhhhcccc
Confidence 456664 556554 45777642 356666 776 689999999999999 99999975
Q ss_pred --------EEEEEEEeCCCCCCC-CceeEEEEEEEEeeCCCCCCc----------cCCCceEEEEeCCCCCCcEEEEEEE
Q psy8644 71 --------WLKVENTKHKGSNPG-PLVGTCNTTIIVEDQNDNNPI----------FPVSQYSLSIPEDVPVGTVVQVVSA 131 (173)
Q Consensus 71 --------~l~v~a~dd~g~~p~-~~~~~~~v~I~V~d~Ndn~P~----------f~~~~y~~~v~E~~~~g~~v~~v~A 131 (173)
.|.|.|+ |.|. |. ++++++.|.|+|.|+|||+|. |.+..|.+.|+|+.++|+.|++|.|
T Consensus 86 ~G~p~~~~~l~V~a~-D~g~-~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A 163 (246)
T 2x2u_A 86 RGFPLLTVYLKVFLS-PTSL-REGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLL 163 (246)
T ss_dssp TTSCCCEEEEEEECC---------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCH
T ss_pred CCCcccceEEEEEEE-cCCC-CCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEE
Confidence 4789999 7776 42 477889999999999999999 9999999999999999999999999
Q ss_pred EeCCCCCCceEEEE-eCCCCCcEEEECCCCEEE-ecCCccccc
Q psy8644 132 SDADLGVNSKLSWN-ELEPNGLFSSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 132 ~D~D~g~n~~v~Y~-~~~~~~~F~Id~~tG~i~-~~~LD~E~~ 172 (173)
+|+|.|.|+.++|+ .+...++|.|++.||.|+ .++||||++
T Consensus 164 ~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 206 (246)
T 2x2u_A 164 PVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQR 206 (246)
T ss_dssp HHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTC
T ss_pred EcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCcccc
Confidence 99999999999999 444479999999999997 899999975
No 12
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.96 E-value=1.1e-28 Score=212.05 Aligned_cols=155 Identities=25% Similarity=0.285 Sum_probs=135.0
Q ss_pred eeeeeeEEeccCCC----cEEEEcCCCCCCCCeEEEEE-e---------eEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLES----RYLHLRPKSGMYAPAFTFSI-A---------KFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~~----~v~~~d~d~~~~n~~i~Ysi-~---------~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-.....++|+... .+.++++|.+ .|+.|+|+| + +|.|++.+|.|++. ++||||.. .|
T Consensus 8 ~~~~~~~v~En~~g~~~~~v~~~~~d~d-~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~----~~LDrE~~~~y~l 82 (546)
T 1l3w_A 8 WVIPPIKVSENERGPFPKRLVQIKSNKD-RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVT----RPLDREEYDKYVL 82 (546)
T ss_dssp CCCCCEEEESSCCSSSCEEEEECCCSGG-GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCEEEE
T ss_pred cccceeEecCCCCCCCCcEEEEEEcCCC-CCceEEEEEECCCCCCCCCceEEEeCCccEEEEC----CcCCcccCceEEE
Confidence 55566788888652 2677777766 489999999 1 69999999999999 99999998 89
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEE--eC
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG---VNSKLSWN--EL 147 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~--~~ 147 (173)
.|+|. |.|. + ++++.+.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+ .+
T Consensus 83 ~v~A~-D~~~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~ 159 (546)
T 1l3w_A 83 SSHAV-SENG-S-PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQ 159 (546)
T ss_dssp EEEEE-ESSS-C-BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEE
T ss_pred EEEEE-eCCC-C-cccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCC
Confidence 99999 6655 5 7888899999999999999999999999999999999999999999999998 79999999 33
Q ss_pred C----CCCcEEEECCCCEEE-e-cCCccccc
Q psy8644 148 E----PNGLFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 148 ~----~~~~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
. ..++|.|++.||.|+ . ++||||+.
T Consensus 160 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~ 190 (546)
T 1l3w_A 160 DPEEPIPNLFTINRETGVISLIGTGLDREKF 190 (546)
T ss_dssp SSCCSCSCSEEECTTTCEEEECSCCCCTTTC
T ss_pred CCCcccCCcEEEeCCCceEEEeccCCCcccC
Confidence 3 458999999999997 3 68999975
No 13
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.96 E-value=1.1e-28 Score=212.17 Aligned_cols=155 Identities=21% Similarity=0.272 Sum_probs=134.4
Q ss_pred eeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE-e---------eEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI-A---------KFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi-~---------~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-...+.+.|+.. ..+.++.+|... +++|+|+| + +|.|++.+|.|++. ++||||.. .|
T Consensus 2 w~~~~~~v~En~~~~~~~~v~~v~ad~d~-~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~----~~LDrE~~~~y~l 76 (550)
T 3q2v_A 2 WVIPPISCPENEKGEFPKNLVQIKSNRDK-ETKVFYSITGQGADKPPVGVFIIERETGWLKVT----QPLDREAIAKYIL 76 (550)
T ss_dssp EECCCEEEETTCCSSSSEEEEECEEGGGG-TSCEEEEEESBTTTBSSCSSEEECTTTCEEEEC----SCCCTTTCSEEEE
T ss_pred CcCCCEEEeCCCCCCcCeEEEEEecCCCC-CceEEEEEECCCCCCCCCceEEEeCCceEEEEC----CccCcccCCeeEE
Confidence 5566888888774 346777776654 78999999 2 89999999999999 99999998 88
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEE--eC
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG---VNSKLSWN--EL 147 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~--~~ 147 (173)
.++|. |.|. + ++++.+.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+ .+
T Consensus 77 ~v~a~-d~~~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~ 153 (550)
T 3q2v_A 77 YSHAV-SSNG-E-AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ 153 (550)
T ss_dssp EEEEE-ETTS-C-BCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEE
T ss_pred EEEEE-eCCC-C-cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecC
Confidence 99999 4444 4 6788899999999999999999999999999999999999999999999998 79999999 22
Q ss_pred ----CCCCcEEEECCCCEEE--ecCCccccc
Q psy8644 148 ----EPNGLFSSDLRVEWVI--NRSVDQHTN 172 (173)
Q Consensus 148 ----~~~~~F~Id~~tG~i~--~~~LD~E~~ 172 (173)
...++|.|++.+|.|+ .++||||++
T Consensus 154 ~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~ 184 (550)
T 3q2v_A 154 DPELPHKNMFTVNRDTGVISVLTSGLDRESY 184 (550)
T ss_dssp ESCCSSSCSEEECTTTCEEEECSSCCCTTTC
T ss_pred CCCCCcCCceEEcCCCeEEEEccCCCCcccC
Confidence 2467999999999996 479999986
No 14
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.95 E-value=6e-28 Score=194.61 Aligned_cols=139 Identities=18% Similarity=0.194 Sum_probs=115.3
Q ss_pred cEEEEcCCCCCCCCeEEEEE---------------eeEEEECCCcEEEEecCCCCCCcCcc-----c---EEEEEEEeCC
Q psy8644 24 RYLHLRPKSGMYAPAFTFSI---------------AKFIANPTTRLYKNVGTLKRALRTEE-----H---WLKVENTKHK 80 (173)
Q Consensus 24 ~v~~~d~d~~~~n~~i~Ysi---------------~~F~Id~~tG~i~~~~~~~~~LD~E~-----~---~l~v~a~dd~ 80 (173)
.+.+.|+|.+. ++.+.|+| .+|.|++ +|.|++. ++||||. . .+.++|. |.
T Consensus 8 ~~~atd~D~g~-ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~----~~LD~E~~~~~~~~~~~l~v~a~-d~ 80 (316)
T 3ubf_A 8 RIEFTEADGDT-EGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVK----KKWDYEELGPEKTIDFWVIITNM-GH 80 (316)
T ss_dssp EEEEESGGGCS-TTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEES----SCCCGGGSCTTCEEEEEEEEEC----
T ss_pred EEEEEecCCCC-CceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEEC----CccChhhcccccceEEEEEEEEc-CC
Confidence 35566777775 67777777 4688888 9999999 9999998 2 6777777 66
Q ss_pred CCCCCCceeEEEEEEEEeeCCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE--eCCCCCcEEEE
Q psy8644 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQ--YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSD 156 (173)
Q Consensus 81 g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~--y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~--~~~~~~~F~Id 156 (173)
|. |.++++++.|.|+|.|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.|.| ++|+ .++..++|.|+
T Consensus 81 ~~-~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id 157 (316)
T 3ubf_A 81 NA-GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVD 157 (316)
T ss_dssp -----CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEEC
T ss_pred CC-CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEE
Confidence 65 4257899999999999999999999886 8999999999999999999999999987 8999 46678999999
Q ss_pred CCCCEEE-ecCCccccc
Q psy8644 157 LRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 157 ~~tG~i~-~~~LD~E~~ 172 (173)
+.+|.|+ .++||||..
T Consensus 158 ~~tG~i~~~~~lD~e~~ 174 (316)
T 3ubf_A 158 ERSGVVRTRGTDLFQLD 174 (316)
T ss_dssp TTTCEEEECSSCCCCTT
T ss_pred CCccEEEECCcCCcccC
Confidence 9999997 889999975
No 15
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=1.1e-27 Score=186.73 Aligned_cols=155 Identities=21% Similarity=0.293 Sum_probs=123.1
Q ss_pred eeEEeccCC--CcEE---EEcCCCCCCCCeEEEEE-----eeEEEECCCcEEEEecCCCCCCcCccc------EEEEEEE
Q psy8644 14 HWSISKLLE--SRYL---HLRPKSGMYAPAFTFSI-----AKFIANPTTRLYKNVGTLKRALRTEEH------WLKVENT 77 (173)
Q Consensus 14 ~~~i~e~~~--~~v~---~~d~d~~~~n~~i~Ysi-----~~F~Id~~tG~i~~~~~~~~~LD~E~~------~l~v~a~ 77 (173)
-..|+|... +.+. +++++.+.+|+.++|+| .+|.|++.+|.+++. ...+.||||.. .+.+.|.
T Consensus 23 ~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~-~t~~~LDrE~~~~~~~~~~~v~~~ 101 (242)
T 4apx_B 23 IVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLN-STGRVLDRDPPMNIHSIVVQVQCV 101 (242)
T ss_dssp EEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEEC-CTTSCCCCSTTTCCCEEEEEEEEE
T ss_pred EEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEE-ecCCceeccCCCceEEEEEEEEeE
Confidence 346777544 4332 34666666789999999 689999999999875 23477999986 3445555
Q ss_pred eCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEE-----EEEEeCCCCCCceEEEE-e-CCC-
Q psy8644 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQV-----VSASDADLGVNSKLSWN-E-LEP- 149 (173)
Q Consensus 78 dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~-----v~A~D~D~g~n~~v~Y~-~-~~~- 149 (173)
+.+. .....+.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|++ |.|+|+|.|.|+.|+|+ . +..
T Consensus 102 -~~~~---~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~ 177 (242)
T 4apx_B 102 -NKKV---GTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPED 177 (242)
T ss_dssp -ETTT---CCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTS
T ss_pred -CCCC---CeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCC
Confidence 3333 4567788999999999999999999999999999999999976 78999999999999999 2 222
Q ss_pred ---CCcEEEEC-CCCEEE-ecCCcccccC
Q psy8644 150 ---NGLFSSDL-RVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 150 ---~~~F~Id~-~tG~i~-~~~LD~E~~~ 173 (173)
.+.|.|++ .||.|+ .++||||+.+
T Consensus 178 ~~~~~~F~Id~~~tG~i~~~~~LD~E~~~ 206 (242)
T 4apx_B 178 PTSNDTFEIPLMLTGNVVLRKRLNYEDKT 206 (242)
T ss_dssp TTHHHHEECSSTTTCCEEECSCCCTTTCC
T ss_pred cccccceEEcCCCceEEEECCcCChhhCC
Confidence 34799984 599997 8999999763
No 16
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.95 E-value=2.8e-27 Score=190.69 Aligned_cols=146 Identities=12% Similarity=0.162 Sum_probs=124.4
Q ss_pred eeEEeccC--CCcE---EEEcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEeC
Q psy8644 14 HWSISKLL--ESRY---LHLRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTKH 79 (173)
Q Consensus 14 ~~~i~e~~--~~~v---~~~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~dd 79 (173)
+..++|+. ++.+ .|.|+|.+. | ++|+| ++|.|++.+|.|++. ++||||.. .|.|+|+ |
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~g~-n--i~Y~i~~~~~~~~F~Id~~tG~i~~~----~~lD~e~~~~y~l~V~A~-D 185 (316)
T 3ubf_A 114 QAVVQLNAPPNTPVFTLQARDPDTDH-N--IHYFIVRDRTGGRFEVDERSGVVRTR----GTDLFQLDMEYVLYVKAE-D 185 (316)
T ss_dssp EEEECTTCCTTCEEEECCEECSSTTC-C--EEEEEEEEESSSCEEECTTTCEEEEC----SSCCCCTTCEEEEEEEEE-E
T ss_pred EEEEeCCCCCCCEEEEEEEECCCCCC-c--eEEEEEeCCCCCEEEEECCccEEEEC----CcCCcccCcEEEEEEEEE-e
Confidence 45677754 4444 455788775 3 99999 699999999999999 99999988 9999999 5
Q ss_pred CCC---CCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE---eCCCCCcE
Q psy8644 80 KGS---NPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN---ELEPNGLF 153 (173)
Q Consensus 80 ~g~---~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~---~~~~~~~F 153 (173)
.|. .| ++++++.+.|.|.| |||+|.|.+..|.+.|+|+.++|+.|++|.|+|+| |+.++|+ .++..++|
T Consensus 186 ~g~~~~~~-~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F 260 (316)
T 3ubf_A 186 QNGKVDDR-RFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTF 260 (316)
T ss_dssp SCC--------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTE
T ss_pred CCCCCCCc-cccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeE
Confidence 542 13 57888999999999 99999999999999999999999999999999998 6789999 35778999
Q ss_pred EEECCCCEEE-ecCCccccc
Q psy8644 154 SSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 154 ~Id~~tG~i~-~~~LD~E~~ 172 (173)
.|++.+|.|+ .++||||+.
T Consensus 261 ~Id~~tG~i~~~~~LD~E~~ 280 (316)
T 3ubf_A 261 NIGPTSGIVKLAKELDFEDL 280 (316)
T ss_dssp EECTTTCEEEECSCCCSSCT
T ss_pred EEECCeEEEEECCcCCcccc
Confidence 9999999997 899999975
No 17
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.95 E-value=1.4e-27 Score=214.47 Aligned_cols=152 Identities=26% Similarity=0.286 Sum_probs=133.0
Q ss_pred eeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EEEEE
Q psy8644 13 NHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVE 75 (173)
Q Consensus 13 ~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~ 75 (173)
..+.++|+.. ..+.++++|.+ .++.|+|+| +.|.|++.+|.|++. ++||||.. .|.|+
T Consensus 160 ~~~~v~En~~~~~~~~v~~v~~d~d-~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~----~~LDrE~~~~y~l~v~ 234 (880)
T 1q55_A 160 PPIKVSENERGPFPKRLVQIKSNKD-RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVT----RPLDREEYDKYVLSSH 234 (880)
T ss_dssp CCEEEESSCCSSSCEEEEECCCSGG-GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCEEEEEEE
T ss_pred cceEEeCCCCCCCCeEEEEEeeCCC-CCceEEEEEECCCCCCCcCCEEEEECCcCEEEEC----CccCccccCccEEEEE
Confidence 3568888765 34677777766 478999999 169999999999999 99999998 89999
Q ss_pred EEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEE--eCC--
Q psy8644 76 NTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLG---VNSKLSWN--ELE-- 148 (173)
Q Consensus 76 a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~--~~~-- 148 (173)
|+ |.|. + ++++.+.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|++|+|+|+|.| .|+.++|+ .+.
T Consensus 235 A~-D~g~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~ 311 (880)
T 1q55_A 235 AV-SENG-S-PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE 311 (880)
T ss_dssp EE-ESSS-C-BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC
T ss_pred EE-ECCC-C-ceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCC
Confidence 99 6655 5 7888999999999999999999999999999999999999999999999998 79999999 333
Q ss_pred --CCCcEEEECCCCEEE-e-cCCccccc
Q psy8644 149 --PNGLFSSDLRVEWVI-N-RSVDQHTN 172 (173)
Q Consensus 149 --~~~~F~Id~~tG~i~-~-~~LD~E~~ 172 (173)
..++|.|++.||.|+ . ++||||+.
T Consensus 312 ~~~~~~F~Id~~tG~I~~~~~~LDrE~~ 339 (880)
T 1q55_A 312 EPIPNLFTINRETGVISLIGTGLDREKF 339 (880)
T ss_dssp CSCSCSEEECTTTCEEEECSCCCCTTTC
T ss_pred cccCCeEEEccCCccEEEecccCCHHHc
Confidence 457999999999997 3 68999975
No 18
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.95 E-value=6.9e-27 Score=194.97 Aligned_cols=146 Identities=26% Similarity=0.408 Sum_probs=124.8
Q ss_pred eeEEeccC--CCcEEEEcCCCCCCCCeEEEEE-------eeEEEECCCcEEEEecCCCCCCcCccc------EEEEEEEe
Q psy8644 14 HWSISKLL--ESRYLHLRPKSGMYAPAFTFSI-------AKFIANPTTRLYKNVGTLKRALRTEEH------WLKVENTK 78 (173)
Q Consensus 14 ~~~i~e~~--~~~v~~~d~d~~~~n~~i~Ysi-------~~F~Id~~tG~i~~~~~~~~~LD~E~~------~l~v~a~d 78 (173)
+..++|+. ++.+..+.+.+.. |+.++|+| .+|+|++.+|.|++. ++||||.. .|.|.|+|
T Consensus 225 ~~~v~En~~~gt~v~~v~A~D~d-n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~----~~LD~E~~~~~~~y~l~V~a~d 299 (419)
T 3ubh_A 225 EAEIPENQKKDSDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLA----KELDFEDLRQPHVYSLIVTATE 299 (419)
T ss_dssp EEEEETTCCTTCEEEECCEECSS-CCCCEEEEEESSSCCSSEEECTTTCEEEEC----SCCCTTCTTSCSEEEEEEEEEC
T ss_pred EEEecCCCCCCcEEEEEEEecCC-CCceEEEEecCCCCCCcEEEECCCCEEEEC----cccCccccccccEEEEEEEEEe
Confidence 34567754 4556655543333 78899999 689999999999999 99999973 79999994
Q ss_pred CCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEE-EEeCCCCCCcEEEEEEEEeCCCCCCceEEEEeCCCCCcEEEEC
Q psy8644 79 HKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSL-SIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDL 157 (173)
Q Consensus 79 d~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~-~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~~~~~~~~F~Id~ 157 (173)
+ +. ++++++.|.|+|.|+|||+|.|..+.|.. .|+|+.++|+.|++|.|+|+|.|.|+.++|+..+ ++|.|++
T Consensus 300 d-~~---~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~--~~F~Id~ 373 (419)
T 3ubh_A 300 D-SG---GFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD--DHFAVDS 373 (419)
T ss_dssp T-TT---SCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC--TTEEECT
T ss_pred C-CC---CcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC--CcEEECC
Confidence 4 33 57899999999999999999999999986 8999999999999999999999999999999543 4899998
Q ss_pred CCCEEE-ecCCcccc
Q psy8644 158 RVEWVI-NRSVDQHT 171 (173)
Q Consensus 158 ~tG~i~-~~~LD~E~ 171 (173)
+|.|+ .++||||+
T Consensus 374 -~G~i~~~~~ld~E~ 387 (419)
T 3ubh_A 374 -NGIIVNNKQLDADN 387 (419)
T ss_dssp -TCEEEECSCSSSSC
T ss_pred -CeEEEECcccCccc
Confidence 89997 89999997
No 19
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.95 E-value=1.2e-26 Score=193.43 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=122.6
Q ss_pred cEEEEcCCCCCCCCeEEEEE------eeEEEEC--------CCcEEEEecCCCCCCcCccc------EEEEEEEeCCCCC
Q psy8644 24 RYLHLRPKSGMYAPAFTFSI------AKFIANP--------TTRLYKNVGTLKRALRTEEH------WLKVENTKHKGSN 83 (173)
Q Consensus 24 ~v~~~d~d~~~~n~~i~Ysi------~~F~Id~--------~tG~i~~~~~~~~~LD~E~~------~l~v~a~dd~g~~ 83 (173)
.+.|.|+|.|. |+.++|+| ..|+|++ .+|.|++. ++||||.. .|.|.|+ |.|.
T Consensus 13 ~v~AtD~D~g~-n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~----~~LD~E~~~~~~~~~~~V~a~-d~g~- 85 (419)
T 3ubh_A 13 RIEFTEADGDT-EGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVK----KKWDYEELGPEKTIDFWVIIT-NMGH- 85 (419)
T ss_dssp EEEEEGGGGCS-TTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEES----SCCCGGGSCTTCEEEEEEEEE-C--C-
T ss_pred EEEEEcccCCC-CceEEEEEecCCCCceEEEcCCCccEEECCCcEEEEC----CccCccccCccceEEEEEEEE-eCCC-
Confidence 46788999986 89999999 7899997 89999999 99999974 8999999 6665
Q ss_pred CC--CceeEEEEEEEEeeCCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE--eCCCCCcEEEEC
Q psy8644 84 PG--PLVGTCNTTIIVEDQNDNNPIFPVSQ--YSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN--ELEPNGLFSSDL 157 (173)
Q Consensus 84 p~--~~~~~~~v~I~V~d~Ndn~P~f~~~~--y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~--~~~~~~~F~Id~ 157 (173)
|. .+++.+.|.|+|.|+|||+|.|.... |...|+|++++|+.|+++.|+|+|.|.| ++|+ .++..++|.|++
T Consensus 86 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~ 163 (419)
T 3ubh_A 86 NAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDE 163 (419)
T ss_dssp CSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECT
T ss_pred CCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeC
Confidence 31 46788999999999999999999877 7899999999999999999999999887 7888 566779999999
Q ss_pred CCCEEE-ecCCccccc
Q psy8644 158 RVEWVI-NRSVDQHTN 172 (173)
Q Consensus 158 ~tG~i~-~~~LD~E~~ 172 (173)
.+|.|+ .+.||||..
T Consensus 164 ~tG~i~~~~~ld~e~~ 179 (419)
T 3ubh_A 164 RSGVVRTRGTDLFQLD 179 (419)
T ss_dssp TTCEEEECSSSCCCBT
T ss_pred CceEEEEecccccccc
Confidence 999997 788999864
No 20
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.94 E-value=9.4e-27 Score=199.92 Aligned_cols=152 Identities=21% Similarity=0.288 Sum_probs=130.4
Q ss_pred eeEEeccCC--CcE---EEEcCCCCC--CCCeEEEEE---e-------eEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 14 HWSISKLLE--SRY---LHLRPKSGM--YAPAFTFSI---A-------KFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 14 ~~~i~e~~~--~~v---~~~d~d~~~--~n~~i~Ysi---~-------~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
...++|+.. +.+ .|.|+|.+. .|+.++|+| . +|.|++.||.|++. .++||||.. .|.
T Consensus 120 ~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~---~~~LD~E~~~~y~l~ 196 (546)
T 1l3w_A 120 RGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLI---GTGLDREKFPEYTLT 196 (546)
T ss_dssp EEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEEC---SCCCCTTTCCEEEEE
T ss_pred EEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEe---ccCCCcccCceEEEE
Confidence 346777654 444 456888872 589999999 2 79999999999984 268999998 999
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC--CCCCceEEEE-eCCCC
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD--LGVNSKLSWN-ELEPN 150 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D--~g~n~~v~Y~-~~~~~ 150 (173)
|+|+ |.|. | ++++++.|.|+|.|+|||+|.|....|...|+|+ ++|+.|++|.|+|+| .|.|+.++|+ .++..
T Consensus 197 V~A~-D~g~-~-~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~ 272 (546)
T 1l3w_A 197 VQAT-DLEG-A-GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEG 272 (546)
T ss_dssp EEEE-HHHH-T-SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTT
T ss_pred EEEE-ECCC-C-CcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCC
Confidence 9999 7776 6 7999999999999999999999999999999999 999999999999999 6789999999 44677
Q ss_pred CcEEEE--C--CCCEEE-ecCCccccc
Q psy8644 151 GLFSSD--L--RVEWVI-NRSVDQHTN 172 (173)
Q Consensus 151 ~~F~Id--~--~tG~i~-~~~LD~E~~ 172 (173)
++|.|+ + .+|.|+ .++||||+.
T Consensus 273 ~~F~I~~d~~~~~G~i~~~~~LD~E~~ 299 (546)
T 1l3w_A 273 GFFNITTDPESNQGILTTAKGLDFELR 299 (546)
T ss_dssp SCEEEEECTTTCCEEEEESSCCCCSSC
T ss_pred ceEEEEecCCCCeEEEEECccCCcccc
Confidence 899996 2 689997 899999975
No 21
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.94 E-value=2e-26 Score=198.04 Aligned_cols=153 Identities=21% Similarity=0.296 Sum_probs=131.0
Q ss_pred eeEEecc--CCCcEEE---EcCCCCC--CCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 14 HWSISKL--LESRYLH---LRPKSGM--YAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 14 ~~~i~e~--~~~~v~~---~d~d~~~--~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
..+|+|+ +++.+.. .|+|.+. .|+.++|+| .+|+|++.+|.|++. .++||||.. .|.
T Consensus 114 ~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~---~~~LDrE~~~~y~l~ 190 (550)
T 3q2v_A 114 EGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVL---TSGLDRESYPTYTLV 190 (550)
T ss_dssp EEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEEC---SSCCCTTTCSEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEc---cCCCCcccCcEEEEE
Confidence 4567775 4555554 4677762 478999999 279999999999873 278999998 999
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCc--eEEEE-eCCCC
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNS--KLSWN-ELEPN 150 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~--~v~Y~-~~~~~ 150 (173)
|+|+ |.|. | ++++++.|.|+|.|+|||+|.|.+..|.+.|+|+ ++|+.|++|.|+|+|.|.++ .+.|+ .++..
T Consensus 191 V~A~-D~g~-~-~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~ 266 (550)
T 3q2v_A 191 VQAA-DLQG-E-GLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPD 266 (550)
T ss_dssp EEEE-SGGG-T-SCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSS
T ss_pred EEEE-cCCC-C-CeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCC
Confidence 9999 7766 6 8999999999999999999999999999999999 99999999999999999876 46799 55778
Q ss_pred CcEEEE----CCCCEEE-ecCCcccccC
Q psy8644 151 GLFSSD----LRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 151 ~~F~Id----~~tG~i~-~~~LD~E~~~ 173 (173)
++|.|+ +.+|.|+ .++||||+.+
T Consensus 267 ~~F~i~~d~~~~tG~i~~~~~LD~E~~~ 294 (550)
T 3q2v_A 267 QQFVVVTDPTTNDGILKTAKGLDFEAKQ 294 (550)
T ss_dssp CCEEEEECTTTCCEEEEESSCCCTTTCS
T ss_pred CcEEEEecCCCccEEEEecccCCccccc
Confidence 999998 7899997 8999999753
No 22
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.94 E-value=2.8e-26 Score=197.49 Aligned_cols=153 Identities=23% Similarity=0.281 Sum_probs=129.8
Q ss_pred eEEeccC--CCcE---EEEcCCCCC-CCCeEEEEE----------eeEEEECCCcEEEEecCCCC-CCcCccc---EEEE
Q psy8644 15 WSISKLL--ESRY---LHLRPKSGM-YAPAFTFSI----------AKFIANPTTRLYKNVGTLKR-ALRTEEH---WLKV 74 (173)
Q Consensus 15 ~~i~e~~--~~~v---~~~d~d~~~-~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~-~LD~E~~---~l~v 74 (173)
.+|+|+. ++.+ .|.|+|.+. .|+.++|+| .+|.|++.+|.|++. + .||||.. .|.|
T Consensus 115 ~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~~LD~E~~~~y~l~V 190 (559)
T 3q2w_A 115 GSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITV----AAGLDREKVQQYTLII 190 (559)
T ss_dssp EEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEEC----CSCCCTTTCCEEEEEE
T ss_pred EEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEE----eccCCcccCCEEEEEE
Confidence 4677754 4545 455788762 489999999 259999999999988 6 9999998 9999
Q ss_pred EEEeCCCCCC-CCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCC--CceEEEE--eCCC
Q psy8644 75 ENTKHKGSNP-GPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGV--NSKLSWN--ELEP 149 (173)
Q Consensus 75 ~a~dd~g~~p-~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~--n~~v~Y~--~~~~ 149 (173)
+|+|..|. | .++++++.|.|+|.|+|||+|.|....|...|+|+. +|+.|+++.|+|+|.|. |+.+.|+ .++.
T Consensus 191 ~A~D~~g~-p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~ 268 (559)
T 3q2w_A 191 QATDMEGN-PTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDP 268 (559)
T ss_dssp EEEHHHHC-TTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCT
T ss_pred EEEECCCC-CCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCC
Confidence 99943354 3 158999999999999999999999999999999997 89999999999999985 6789999 6777
Q ss_pred CCcEEE----ECCCCEEE-ecCCcccccC
Q psy8644 150 NGLFSS----DLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 150 ~~~F~I----d~~tG~i~-~~~LD~E~~~ 173 (173)
.+.|.| ++.+|.|+ .++||||+.+
T Consensus 269 ~~~F~I~~~~~~~~G~i~~~~~LD~E~~~ 297 (559)
T 3q2w_A 269 TGRFAILTDPNSNDGLVTVVKPIDFETNR 297 (559)
T ss_dssp TCCEEEEECTTTCEEEEEECSCCCTTTCS
T ss_pred CCceEEEecCCCCcEEEEeCCCCCCccCc
Confidence 899999 47899997 8999999753
No 23
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.93 E-value=8.2e-26 Score=203.09 Aligned_cols=152 Identities=21% Similarity=0.282 Sum_probs=130.3
Q ss_pred eeEEeccC--CCcE---EEEcCCCCC--CCCeEEEEE---e-------eEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 14 HWSISKLL--ESRY---LHLRPKSGM--YAPAFTFSI---A-------KFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 14 ~~~i~e~~--~~~v---~~~d~d~~~--~n~~i~Ysi---~-------~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
..+|+|+. ++.+ .|.|+|.+. .|+.|+|+| . +|+|++.||.|++. .+.||||.. .|.
T Consensus 269 ~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~---~~~LDrE~~~~y~l~ 345 (880)
T 1q55_A 269 RGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLI---GTGLDREKFPEYTLT 345 (880)
T ss_dssp EEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEEC---SCCCCTTTCCEEEEE
T ss_pred EEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEe---cccCCHHHcceeEEE
Confidence 34677764 4444 455788872 589999999 2 79999999999984 268999998 899
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC--CCCCceEEEE-eCCCC
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDAD--LGVNSKLSWN-ELEPN 150 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D--~g~n~~v~Y~-~~~~~ 150 (173)
|+|+ |.|. | ++++++.|.|+|.|+|||+|.|....|.++|+|+ ++|+.|++|.|+|+| .|.|+.++|+ .++..
T Consensus 346 V~A~-D~g~-~-~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~ 421 (880)
T 1q55_A 346 VQAT-DLEG-A-GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEG 421 (880)
T ss_dssp EEEE-HHHH-T-SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTT
T ss_pred EEEE-ECCC-C-CccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCC
Confidence 9999 7666 6 7999999999999999999999999999999999 999999999999999 6789999999 44678
Q ss_pred CcEEEE--C--CCCEEE-ecCCccccc
Q psy8644 151 GLFSSD--L--RVEWVI-NRSVDQHTN 172 (173)
Q Consensus 151 ~~F~Id--~--~tG~i~-~~~LD~E~~ 172 (173)
++|.|+ + .+|.|+ .++||||+.
T Consensus 422 ~~F~I~~d~~~~~G~i~~~~~LD~E~~ 448 (880)
T 1q55_A 422 GFFNITTDPESNQGILTTAKGLDFELR 448 (880)
T ss_dssp SCEEEEECTTTCCEEEEESSCCCCSSC
T ss_pred ceEEEEecCCCceEEEecccCCCcccC
Confidence 999995 3 679997 899999975
No 24
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.2e-22 Score=140.93 Aligned_cols=78 Identities=32% Similarity=0.505 Sum_probs=72.0
Q ss_pred EEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEe-C----CCCCcEEEECCCCEEE-ecCCc
Q psy8644 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNE-L----EPNGLFSSDLRVEWVI-NRSVD 168 (173)
Q Consensus 95 I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~~-~----~~~~~F~Id~~tG~i~-~~~LD 168 (173)
|+|.|+|||+|.|.+..|.++|+|++++|+.|++|+|+|+|.|.|+.++|+. + +..++|.|++.||.|+ .++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 4689999999999999999999999999999999999999999999999993 2 3568999999999997 89999
Q ss_pred cccc
Q psy8644 169 QHTN 172 (173)
Q Consensus 169 ~E~~ 172 (173)
||+.
T Consensus 82 ~E~~ 85 (114)
T 2ee0_A 82 REET 85 (114)
T ss_dssp TTTC
T ss_pred cccC
Confidence 9975
No 25
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=5.3e-22 Score=138.62 Aligned_cols=78 Identities=26% Similarity=0.400 Sum_probs=71.2
Q ss_pred EEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE-eCCC---CCcEEEECCCCEEE-ecCCcc
Q psy8644 95 IIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-ELEP---NGLFSSDLRVEWVI-NRSVDQ 169 (173)
Q Consensus 95 I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~-~~~~---~~~F~Id~~tG~i~-~~~LD~ 169 (173)
++|.|+|||+|.|.+..|.++|+|++++|+.|++|.|+|+|.|.|+.++|+ .+.. .++|.|++.||.|+ .++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999999999999999 3322 36899999999997 899999
Q ss_pred ccc
Q psy8644 170 HTN 172 (173)
Q Consensus 170 E~~ 172 (173)
|+.
T Consensus 82 E~~ 84 (119)
T 2yst_A 82 EEV 84 (119)
T ss_dssp TTC
T ss_pred ccC
Confidence 975
No 26
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.81 E-value=5.3e-20 Score=126.83 Aligned_cols=92 Identities=18% Similarity=0.254 Sum_probs=71.4
Q ss_pred cceeeeeeEEeccCC--Cc--EEEEcCCCCCCCCeEEEEE-e---------eEEEECCCcEEEEecCCCCCCcCccc---
Q psy8644 8 KGYEYNHWSISKLLE--SR--YLHLRPKSGMYAPAFTFSI-A---------KFIANPTTRLYKNVGTLKRALRTEEH--- 70 (173)
Q Consensus 8 ~~~~~~~~~i~e~~~--~~--v~~~d~d~~~~n~~i~Ysi-~---------~F~Id~~tG~i~~~~~~~~~LD~E~~--- 70 (173)
+.|-..+.+|+|+.. ++ +.++|+|.+. |+.|+|+| + .|.|++.||.|++. ++||||..
T Consensus 2 r~W~~~~~~v~En~~~gt~~~v~~vd~D~g~-n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y 76 (110)
T 1ncg_A 2 SDWVIPPINLPENSRGPFPQELVRIRSGRDK-NLSLRYSVTGPGADQPPTGIFIINPISGQLSVT----KPLDRELIARF 76 (110)
T ss_dssp -CCCCCCEEECSSCCCCSSEEEEECCCGGGG-GSCCEEEEESBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCEE
T ss_pred CccEeeeEEEeCCCCCCCcEEEEEEeCCCCC-CCEEEEEEeCCCCCCCcCCEEEEECCCCEEEEC----CcCCcccCCeE
Confidence 456677889999664 43 6778888885 89999999 2 69999999999999 99999988
Q ss_pred EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCcc
Q psy8644 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIF 107 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f 107 (173)
.|.|.|+ |.|. | ++++++.|.|+|.|+|||+|.|
T Consensus 77 ~l~V~A~-D~g~-p-~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 77 HLRAHAV-DING-N-QVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEEEEE-CTTS-C-BCSCCEEEEEEEC---------
T ss_pred EEEEEEE-ECCC-C-ceeeEEEEEEEEEECCCCCCCC
Confidence 8999999 8887 7 8999999999999999999987
No 27
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.3e-19 Score=125.95 Aligned_cols=93 Identities=17% Similarity=0.141 Sum_probs=78.0
Q ss_pred ceeeeeeEEecc----CCCcEEEE--cCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc--
Q psy8644 9 GYEYNHWSISKL----LESRYLHL--RPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH-- 70 (173)
Q Consensus 9 ~~~~~~~~i~e~----~~~~v~~~--d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~-- 70 (173)
.|...++.+.|+ +++.|.++ |+|.+. |+.|+|+| .+|.|++.||.|++. ++||||..
T Consensus 11 ~f~~~~~~v~e~e~~~~gt~v~~v~~D~D~g~-n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~ 85 (123)
T 2yqg_A 11 AWITAPVALREGEDLSKKNPIAKIHSDLAEER-GLKITYKYTGKGITEPPFGIFVFNKDTGELNVT----SILDREETPF 85 (123)
T ss_dssp SSCCCCEEEESSSCCCSSCCCBCCCCHHHHHH-TCCCEEEEEEBTTTBSSCSSEEEETTTTEEEEC----SCCBTTTBSE
T ss_pred ccCCCCEEEEecCCCCCCCEEEEEEECCCCCC-CceEEEEEecCCCCCCcCCCEEEeCCcCEEEEC----cccCcccCce
Confidence 455567777774 45555444 666675 78999999 269999999999999 99999998
Q ss_pred -EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCC
Q psy8644 71 -WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPV 109 (173)
Q Consensus 71 -~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~ 109 (173)
.|.|.|+ |.|. | ++++++.|.|+|.|+|||+|.|.+
T Consensus 86 y~l~V~A~-D~g~-p-~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 86 FLLTGYAL-DARG-N-NVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEEEEEE-CTTC-C-EEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEEEEEEE-ECCC-C-ceEEEEEEEEEEEEcCCCCCEeCC
Confidence 8999999 8887 7 899999999999999999999976
No 28
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.1e-17 Score=114.27 Aligned_cols=84 Identities=17% Similarity=0.281 Sum_probs=72.1
Q ss_pred eeEEeccC--CCcEEE---EcCCCCCCCCeEEEEE--------eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEE
Q psy8644 14 HWSISKLL--ESRYLH---LRPKSGMYAPAFTFSI--------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENT 77 (173)
Q Consensus 14 ~~~i~e~~--~~~v~~---~d~d~~~~n~~i~Ysi--------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~ 77 (173)
+..++|+. ++.+.+ .|+|.|. |+.|+|+| .+|.|++.||.|++. ++||||.. .|.|.|+
T Consensus 20 ~~~v~En~~~Gt~v~~v~A~D~D~g~-n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~----~~LD~E~~~~y~l~V~A~ 94 (119)
T 2yst_A 20 EADLAENSAPGTPILQLRAADLDVGV-NGQIEYVFGAATESVRRLLRLDETSGWLSVL----HRIDREEVNQLRFTVMAR 94 (119)
T ss_dssp EEEEETTCCTTCEEEECCCCCSSSSC-CSCCCCEECSCCTTHHHHEEECTTTCEEEEC----SCCCTTTCSEEEEEEEEC
T ss_pred EEEEECCCCCCCEEEEEEEEeCCCCC-CCeEEEEEecCCCccccEEEEeCCceEEEEC----ccCCcccCCEEEEEEEEE
Confidence 45677764 455544 4778775 89999999 379999999999999 99999987 9999999
Q ss_pred eCCCCCCCCceeEEEEEEEEeeCCCCCC
Q psy8644 78 KHKGSNPGPLVGTCNTTIIVEDQNDNNP 105 (173)
Q Consensus 78 dd~g~~p~~~~~~~~v~I~V~d~Ndn~P 105 (173)
|.|. | ++++++.|.|+|.|+|||+|
T Consensus 95 -D~g~-p-~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 95 -DRGQ-P-PKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp -CSBT-T-BCCEEEEEEEEEECSTTCCC
T ss_pred -ECCC-C-CcEEEEEEEEEEEeccCCCC
Confidence 8888 7 89999999999999999998
No 29
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.66 E-value=4.4e-16 Score=121.26 Aligned_cols=88 Identities=18% Similarity=0.124 Sum_probs=72.8
Q ss_pred eeEEeccCC--CcEE---EEcCCCCCCCCeEEEEE-----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEeCC
Q psy8644 14 HWSISKLLE--SRYL---HLRPKSGMYAPAFTFSI-----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTKHK 80 (173)
Q Consensus 14 ~~~i~e~~~--~~v~---~~d~d~~~~n~~i~Ysi-----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~dd~ 80 (173)
++.++|+.. +.+. |.|+|.|. |+.|+|+| .+|+|++.+|.|++. ++||||.. .|.|.|+|..
T Consensus 145 ~~~v~En~~~Gt~v~~v~A~D~D~g~-n~~i~Y~i~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~V~A~d~d 219 (246)
T 2x2u_A 145 SFRIRENRPPGTFHQFRLLPVQFLCP-QISVAYRLLEGEGLPFRSAPDSLEVSTR----WALDREQREKYELVAVCTVHA 219 (246)
T ss_dssp CEEEEBTSCCCEEEECSCHHHHHHCT-TSCEEEEEESCTTSSEECCTTCCEEEES----SCBCTTTCSEEEEEEEEEEC-
T ss_pred EEEEECCCCCCcEEEEEEEEcCCCCC-CcEEEEEEccCCCCCEEEECCcCEEEeC----CccCccccceEEEEEEEEecC
Confidence 456777654 4343 34788885 89999999 689999999999999 99999998 8999999635
Q ss_pred CCCCCCceeEEEEEEEEeeCCCCCCccC
Q psy8644 81 GSNPGPLVGTCNTTIIVEDQNDNNPIFP 108 (173)
Q Consensus 81 g~~p~~~~~~~~v~I~V~d~Ndn~P~f~ 108 (173)
|. | ++++++.|.|+|.|+|||+|.|.
T Consensus 220 g~-p-~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 220 GA-R-EEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp ---C-CEEEEEEEEEEEECSSCCSCCCC
T ss_pred CC-C-cceEEEEEEEEEEEeCCCCCccC
Confidence 66 7 89999999999999999999996
No 30
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=8.1e-17 Score=113.27 Aligned_cols=97 Identities=20% Similarity=0.125 Sum_probs=74.8
Q ss_pred ceeeeeeEEecc--CCCcEEEEcCCCCCCCCeE---EEEE------eeEEEECCCcEEEEecCCCCCCcCccc-------
Q psy8644 9 GYEYNHWSISKL--LESRYLHLRPKSGMYAPAF---TFSI------AKFIANPTTRLYKNVGTLKRALRTEEH------- 70 (173)
Q Consensus 9 ~~~~~~~~i~e~--~~~~v~~~d~d~~~~n~~i---~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~------- 70 (173)
.....+++|+|. +++.|..+..|.+...+.+ +|+| .+|.||+.||.|++. ++||||..
T Consensus 9 ~~~~~~~~V~E~~~~Gt~V~~va~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~----~~LDRE~~c~~~~~y 84 (125)
T 1wyj_A 9 GSATITYSVLEETDRGSLVGNLAKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLK----EKLDREELCGSTNPC 84 (125)
T ss_dssp CCCCCCEEECSSCCTTCEEEESTTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEES----SCCCSTTTCTTCSSC
T ss_pred cCceEEEEEECCCCCCCEEEEEEecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEEC----ccccchhhcccCCcE
Confidence 334456788885 4666777744444323445 8999 689999999999999 99999975
Q ss_pred EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEE
Q psy8644 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLS 115 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~ 115 (173)
.|.++|. + +. | . ..+.|.|+|.|+|||+|.|.+..|.++
T Consensus 85 ~l~v~a~-~-~~-p--~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 85 ILHFQVL-L-KS-P--V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CBCCEEE-E-TT-T--T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEE-E-CC-C--C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 6888888 4 23 3 3 478999999999999999999988654
No 31
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.59 E-value=2.5e-15 Score=102.48 Aligned_cols=85 Identities=16% Similarity=0.146 Sum_probs=72.9
Q ss_pred cceeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE---e-------eEEEECCCcEEEEecCCCCCCcCccc---
Q psy8644 8 KGYEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI---A-------KFIANPTTRLYKNVGTLKRALRTEEH--- 70 (173)
Q Consensus 8 ~~~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi---~-------~F~Id~~tG~i~~~~~~~~~LD~E~~--- 70 (173)
+.|...+..|+|+.. +.+.++.||.+. |+.|+|+| + .|.||+.||.|++. ++||||..
T Consensus 4 r~w~~~~~~V~En~~~~~~~~v~~v~Ad~g~-N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~----~~LDrE~~~~y 78 (105)
T 2omz_B 4 GSWVIPPISCPENEKGPFPKNLVQIKSNKDK-EGKVFYSITGQGADTPPVGVFIIERETGWLKVT----EPLDRERIATY 78 (105)
T ss_dssp TTEECCCCCEESSCCSSSSEEEEECEEGGGG-SSCCEEEEEEBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCEE
T ss_pred ccEEccCEEEeCCCCCCCCcEEEEEECCCCC-CCeEEEEEeCCCCCCCccCEEEEeCCCCEEEEC----ccCCcCCCCeE
Confidence 356777888999766 346777888775 89999999 1 69999999999999 99999998
Q ss_pred EEEEEEEeCCCCCCCCceeEEEEEEEEeeC
Q psy8644 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQ 100 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~ 100 (173)
.|+|+|+ |.|. | ++++++.|.|+|.|+
T Consensus 79 ~l~V~A~-D~g~-p-~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 79 TLFSHAV-SSNG-N-AVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEEEEE-CTTS-C-BSSCCEEEEEEEEC-
T ss_pred EEEEEEE-ECCC-C-ceeeEEEEEEEEEeC
Confidence 9999999 8888 7 899999999999985
No 32
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.58 E-value=1.1e-14 Score=98.37 Aligned_cols=83 Identities=16% Similarity=0.243 Sum_probs=68.7
Q ss_pred ceeeeeeEEeccCC----CcEEE--EcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 9 GYEYNHWSISKLLE----SRYLH--LRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 9 ~~~~~~~~i~e~~~----~~v~~--~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
.|-..++.++|+.. +.+.+ .|+|.| |+.|+|+| +.|.|++.+|.|++. ++||||.. .|+
T Consensus 2 ~w~~~~~~v~En~~~~~g~~v~~v~~D~D~g--Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~ 75 (99)
T 1zvn_A 2 GWVWNQFFVLEEYTGTDPLYVGKLHSDMDRG--DGSIKYILSGEGAGIVFTIDDTTGDIHAI----QRLDREERSQYTLR 75 (99)
T ss_dssp CBCCCEEEEEGGGCSSSCEEEEECCBTTCCS--SSCEEEEEEETTBTTTEEECTTTCEEEEC----SCCCTTTCSEEEEE
T ss_pred CccccEEEEECCCCCCCCcEEEEEEECCCCC--CCEEEEEEeCCCCCceEEEeCCCCCEEEC----eecCCccCCeEEEE
Confidence 46677889999853 33444 467777 89999999 369999999999999 99999998 999
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
|.|+ |.|.+| ++++.+.|.|+|.|
T Consensus 76 V~A~-D~G~~p-~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 76 AQAL-DRRTGR-PMEPESEFIIKIQD 99 (99)
T ss_dssp EEEE-ETTTCC-BSSCCEEEEEEEEC
T ss_pred EEEE-ECCCCC-CcceeEEEEEEEeC
Confidence 9999 777216 89999999999987
No 33
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.56 E-value=2e-14 Score=96.86 Aligned_cols=82 Identities=18% Similarity=0.210 Sum_probs=65.2
Q ss_pred eeeeeeEEeccCC----CcEEE--EcCCCCCCCCeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc---EEEE
Q psy8644 10 YEYNHWSISKLLE----SRYLH--LRPKSGMYAPAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKV 74 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~--~d~d~~~~n~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v 74 (173)
|-..++.++|+.. +.+.+ .|+|.| |++|+|+| ..|+||+.||.|++. ++||||.. .|+|
T Consensus 2 W~~~~~~v~En~~~p~~~~v~~v~~D~D~g--N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l~v 75 (98)
T 1zxk_A 2 WVWNQMFVLEEFSGPEPILVGRLHTDLDPG--SKKIKYILSGDGAGTIFQINDITGDIHAI----KRLDREEKAEYTLTA 75 (98)
T ss_dssp BCCCEEEECGGGCSSSCEEEEECCBCCCCC----CEEEEEEETTBTTTEEECTTTCEEEEC----SCCCTTTCSEEEEEE
T ss_pred cccceEEEECCCCCCCCeEEEEEEECCCCC--CCEEEEEEeCCCCCCEEEEECCccEEEEC----ccCCCcCCCeEEEEE
Confidence 4456778888763 23433 477777 79999999 379999999999999 99999998 9999
Q ss_pred EEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 75 ENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 75 ~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
.|+ |.|..| ++++.+.|.|+|.|
T Consensus 76 ~A~-D~g~~~-~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 76 QAV-DFETNK-PLEPPSEFIIKVQD 98 (98)
T ss_dssp EEE-ETTTCC-BSSCCEEEEEEECC
T ss_pred EEE-ECCCCC-CcceeEEEEEEEEC
Confidence 999 766424 78999999999987
No 34
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.52 E-value=7.5e-14 Score=106.05 Aligned_cols=83 Identities=20% Similarity=0.264 Sum_probs=70.7
Q ss_pred eeEEeccC--CCcE---EEEcCCCCCCCCeEEEEE----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEeCCC
Q psy8644 14 HWSISKLL--ESRY---LHLRPKSGMYAPAFTFSI----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTKHKG 81 (173)
Q Consensus 14 ~~~i~e~~--~~~v---~~~d~d~~~~n~~i~Ysi----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~dd~g 81 (173)
+..++|+. ++.+ .|.|+|.|. |+.++|+| .+|.|++.+|.|++. ++||||.. .|.|.|+ |.|
T Consensus 115 ~~~v~E~~~~gt~v~~v~A~D~D~g~-n~~v~Y~i~~~~~~F~Id~~tG~i~~~----~~LD~E~~~~y~l~V~a~-D~g 188 (210)
T 3mvs_A 115 SVRIPENTPVGTPIFIVNATDPDLGA-GGSVLYSFQPPSPFFAIDSARGIVTVI----QELDYEVTQAYQLTVNAT-DQD 188 (210)
T ss_dssp EEEEETTCCTTCEEEECCEECCSSGG-GGCEEEEESSCCSSEEECTTTCEEEEC----SCCCTTTCSEEEEEEEEE-ECC
T ss_pred EEEEECCCCCCCEEEEEEEEeCCCCC-CceEEEEEeCCCCCEEEeCCcEEEEEC----CcCCCcccceEEEEEEEE-ECC
Confidence 45677754 4544 456888886 88999999 789999999999999 99999988 9999999 555
Q ss_pred -CCCCCceeEEEEEEEEeeCCCCC
Q psy8644 82 -SNPGPLVGTCNTTIIVEDQNDNN 104 (173)
Q Consensus 82 -~~p~~~~~~~~v~I~V~d~Ndn~ 104 (173)
. | ++++++.+.|+|.|+||||
T Consensus 189 ~~-~-~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 189 KT-R-PLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp SS-S-CCEEEEEEEEEEECCCCCC
T ss_pred CC-C-CCEEEEEEEEEEEccCCCC
Confidence 5 6 8999999999999999986
No 35
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.52 E-value=7.7e-14 Score=106.49 Aligned_cols=87 Identities=17% Similarity=0.286 Sum_probs=64.5
Q ss_pred eeEEeccC--CCcE---EEEcCCC---CCCCCeEEEEE----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEe
Q psy8644 14 HWSISKLL--ESRY---LHLRPKS---GMYAPAFTFSI----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTK 78 (173)
Q Consensus 14 ~~~i~e~~--~~~v---~~~d~d~---~~~n~~i~Ysi----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~d 78 (173)
+..++|+. ++.+ .|.|+|. | .|+.|+|+| ..|.|++.+|.|++. .++||||.. .|.|+|+
T Consensus 113 ~~~v~E~~~~Gt~v~~v~A~D~D~~~~G-~n~~i~Y~i~~~~~~F~Id~~tG~I~~~---~~~LD~E~~~~y~l~V~A~- 187 (215)
T 2a4e_A 113 HANVPERSNVGTSVIQVTASDADDPTYG-NSAKLVYSILEGQPYFSVEAQTGIIRTA---LPNMDREAKEEYHVVIQAK- 187 (215)
T ss_dssp EEEEETTCCTTCEEEECCEECSSCTTTC-SSSCCEEEEEESTTTEEECTTTCEEEEC---SSCCCSSSCSEEEEEEEEE-
T ss_pred EEEEECCCCCCCEEEEEEEEECCCCCCC-CceEEEEEEeCCCCcEEEeCCccEEEEc---ccCCCcccCCEEEEEEEEE-
Confidence 34677754 4544 4557786 5 488999999 689999999999886 378999998 9999999
Q ss_pred CCCCCC-CCceeEEEEEEEEeeCCCCCCc
Q psy8644 79 HKGSNP-GPLVGTCNTTIIVEDQNDNNPI 106 (173)
Q Consensus 79 d~g~~p-~~~~~~~~v~I~V~d~Ndn~P~ 106 (173)
|.|. | .++++++.|.|+|.|+|||+|.
T Consensus 188 D~g~-~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 188 DMGG-HMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTTT-CTTCCEEEEEEEEEEEC-------
T ss_pred ECCC-CCCCceeEEEEEEEEEECCCCCCC
Confidence 7776 3 2589999999999999999994
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=94.70 Aligned_cols=78 Identities=24% Similarity=0.259 Sum_probs=65.4
Q ss_pred eeEEeccC--CCcEEE---EcCCCCCCCCeEEEEE---------eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEE
Q psy8644 14 HWSISKLL--ESRYLH---LRPKSGMYAPAFTFSI---------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVEN 76 (173)
Q Consensus 14 ~~~i~e~~--~~~v~~---~d~d~~~~n~~i~Ysi---------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a 76 (173)
+..++|+. ++.+.+ .|+|.|. |+.|+|+| .+|+|++.||.|++. ++||||.. .|.|.|
T Consensus 20 ~~~v~En~~~Gt~v~~v~A~D~D~g~-n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~----~~LD~E~~~~y~l~V~A 94 (114)
T 2ee0_A 20 EVHIPENAPVGTSVIQLHATDADIGS-NAEIRYIFGAQVAPATKRLFALNNTTGLITVQ----RSLDREETAIHKVTVLA 94 (114)
T ss_dssp EEEEETTCCTTCEEEECCCCSCSSCC-CSCCEEEECSSCCHHHHHHEEECTTTCEEEEC----SCCCTTTCSEEEEEEEE
T ss_pred EEEEECCCCCCCEEEEEEEEeCCCCC-CcEEEEEEccCCCCCccceEEEeCCeeEEEEC----ccCCcccCcEEEEEEEE
Confidence 45677754 555544 4778875 89999999 479999999999999 99999987 999999
Q ss_pred EeCCCCCCCCceeEEEEEEEEeeCC
Q psy8644 77 TKHKGSNPGPLVGTCNTTIIVEDQN 101 (173)
Q Consensus 77 ~dd~g~~p~~~~~~~~v~I~V~d~N 101 (173)
+ |.|. | + +++.|.|+|+|+|
T Consensus 95 ~-D~g~-~-~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 95 S-DGSS-T-P--ARATVTINVTDVN 114 (114)
T ss_dssp E-SSSS-S-C--EEEEEEEEEECCC
T ss_pred E-ECCC-C-c--eEEEEEEEEEECC
Confidence 9 8887 5 3 7899999999998
No 37
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.49 E-value=1.8e-13 Score=92.44 Aligned_cols=79 Identities=23% Similarity=0.195 Sum_probs=66.1
Q ss_pred ceeeeeeEEeccCCC----cEEEE---cCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc-
Q psy8644 9 GYEYNHWSISKLLES----RYLHL---RPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH- 70 (173)
Q Consensus 9 ~~~~~~~~i~e~~~~----~v~~~---d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~- 70 (173)
+|-...+.++|+... .+.++ |+|. .|+|+| +.|.||+.||.|++. ++||||..
T Consensus 2 ~Wi~~~~~V~EN~~~~~g~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~ 72 (100)
T 3k6f_A 2 GIVVSPILIPENQRQPFPRDVGKVVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSVSVT----RTLDRETIA 72 (100)
T ss_dssp CEECCCEEEETTCCSSSCEEEEECEETTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCS
T ss_pred CcccCcEEEeCCCCCCCCcEEEEEEEEcCCC-----CEEEEEeCCCCCCCcCCEEEEECCCCEEEEC----cccCCcCCC
Confidence 466678899998764 24444 4454 589999 279999999999999 99999998
Q ss_pred --EEEEEEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 71 --WLKVENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 71 --~l~v~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
.|.|+|+ |.|. | ++++.+.|.|+|.|
T Consensus 73 ~y~l~V~A~-D~g~-p-~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 73 TYQLYVETT-DASG-K-TLEGPVPLEVIVID 100 (100)
T ss_dssp EEEEEEEEE-CTTC-C-EEEEEEEEEEEEEC
T ss_pred EEEEEEEEE-ECCC-C-cccceEEEEEEEEC
Confidence 9999999 8888 7 89999999999987
No 38
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.46 E-value=5.5e-13 Score=89.83 Aligned_cols=81 Identities=20% Similarity=0.184 Sum_probs=66.4
Q ss_pred eeeeeeEEeccCC----CcEEEEcCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EE
Q psy8644 10 YEYNHWSISKLLE----SRYLHLRPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WL 72 (173)
Q Consensus 10 ~~~~~~~i~e~~~----~~v~~~d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l 72 (173)
|-.+.+.|+|+.. +.+.++.|.+.+ ..|+|+| +.|.|++.||.|++. ++||||.. .|
T Consensus 2 W~~~~~~V~En~~~~~g~~v~~v~A~D~D--~~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~y~l 75 (99)
T 3k6d_A 2 IVAPSISIPENQRIPFPKIVGRVVVSDRI--PGSKIKLYGKGVDQEPKGIFKINENSGEVSVT----KALDREAIPSYQL 75 (99)
T ss_dssp CBCCCEEEETTCCSCSSEEEEECBCSSCC--TTCEEEEESBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCEEEE
T ss_pred cccCcEEEeCCCCCCCCcEEEEEEEECCC--CcEEEEEecCcCCCCCCCEEEEECCceEEEEC----cCCCcccCceEEE
Confidence 4456788888765 445666554333 2799999 379999999999999 99999998 89
Q ss_pred EEEEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 73 KVENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 73 ~v~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
.|.|+ |.|. | ++++.+.|.|+|.|
T Consensus 76 ~V~A~-D~g~-~-~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 76 QVETT-DENG-K-TIEGPVDLEILVID 99 (99)
T ss_dssp EEEEE-CTTC-C-EEEEEEEEEEEEEC
T ss_pred EEEEE-ECCC-C-ceeeEEEEEEEEEC
Confidence 99999 7887 7 89999999999987
No 39
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.44 E-value=1e-12 Score=88.52 Aligned_cols=78 Identities=19% Similarity=0.088 Sum_probs=64.8
Q ss_pred eeeeeeEEeccCCCc----EEEE---cCCCCCCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc--
Q psy8644 10 YEYNHWSISKLLESR----YLHL---RPKSGMYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH-- 70 (173)
Q Consensus 10 ~~~~~~~i~e~~~~~----v~~~---d~d~~~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~-- 70 (173)
|-...+.++|+...+ +.++ |+|. .|+|+| +.|.||+.||.|++. ++||||..
T Consensus 2 Wv~~~~~v~EN~~~g~~~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~----~~LDrE~~~~ 72 (99)
T 3k6i_A 2 ILATPILIPENQRPPFPRSVGKVIRSEGTE-----GAKFRLSGKGVDQDPKGIFRINEISGDVSVT----RPLDREAIAN 72 (99)
T ss_dssp EECCCEEEETTCCSSSCEEEEECEETTCCS-----SEEEEEESBTTTBSSTTSEEECTTTCEEEEC----SCCCTTTCCE
T ss_pred cccCcEEEeCCCCCCCCeEEEEEEEEcCCC-----eEEEEEeCCCCCCCcCCEEEEECCCcEEEEC----cccCCccCCE
Confidence 455678889877652 4444 4444 799999 279999999999999 99999998
Q ss_pred -EEEEEEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 71 -WLKVENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 71 -~l~v~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
.|.|+|+ |.|. | ++++.+.|.|+|.|
T Consensus 73 y~l~v~A~-D~g~-~-~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 73 YELEVEVT-DLSG-K-IIDGPVRLDISVID 99 (99)
T ss_dssp EEEEEEEE-ETTS-C-EEEEEEEEEEEEEC
T ss_pred EEEEEEEE-ECCC-C-ceeeeEEEEEEEEC
Confidence 8999999 7777 7 89999999999987
No 40
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.42 E-value=1.5e-13 Score=92.70 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=52.1
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEE-eC-CCCCcEEEECCCCEEE-ecCCcccccC
Q psy8644 112 YSLSIPEDVP--VGTVVQVVSASDADLGVNSKLSWN-EL-EPNGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 112 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~-~~-~~~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
+.++|+|+.+ .|+.|++|+ +|+|.| |++|+|+ .+ +..++|.||+.+|.|+ .++||||++.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 70 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERS 70 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCS
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCC
Confidence 4788999976 689999999 999999 9999999 33 3347899999999997 8999999863
No 41
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.4e-14 Score=100.21 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=64.9
Q ss_pred CCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE-eC-----CCCCcEEEECCCCEEE-ecCCccccc
Q psy8644 100 QNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN-EL-----EPNGLFSSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 100 ~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~-~~-----~~~~~F~Id~~tG~i~-~~~LD~E~~ 172 (173)
.+.+.|.|..++|.+.+.|++++|+.|++|. +|+|.|.|+.|+|+ .+ +..++|.|++.||.|+ .++||||+.
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 4689999999999999999999999999999 69999999999999 32 3468999999999997 899999975
No 42
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.41 E-value=2.1e-13 Score=91.81 Aligned_cols=60 Identities=13% Similarity=0.190 Sum_probs=50.3
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEE-eCC-CCCcEEEECCCCEEE-ecCCcccccC
Q psy8644 112 YSLSIPEDVP--VGTVVQVVSASDADLGVNSKLSWN-ELE-PNGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 112 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~-~~~-~~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
+.++|+|+.+ +|+.|++|. +|+|.| |++|+|+ .++ ..++|.||+.||.|+ .++||||++.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 69 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKA 69 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCS
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCC
Confidence 5789999985 899999997 999999 9999999 443 446899999999997 8999999863
No 43
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.28 E-value=1.8e-12 Score=87.35 Aligned_cols=58 Identities=26% Similarity=0.275 Sum_probs=50.5
Q ss_pred eEEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEE-eC-----CCCCcEEEECCCCEEE-ecCCcccccC
Q psy8644 112 YSLSIPEDVPV--GTVVQVVSASDADLGVNSKLSWN-EL-----EPNGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 112 y~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~Y~-~~-----~~~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
+.++|+|+.++ |+.|++|+|+|+|. .++|+ .+ +..+.|.||+.||.|+ .++||||+++
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 71 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIP 71 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCC
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCc
Confidence 36899999999 99999999999997 68999 32 3468999999999997 8999999863
No 44
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.24 E-value=1e-11 Score=83.59 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=49.3
Q ss_pred EEEEeCCCCCC--cEEEEEEEEeCCCCCCceEEEE-eC-----CCCCcEEEECCCCEEE-ecCCcccccC
Q psy8644 113 SLSIPEDVPVG--TVVQVVSASDADLGVNSKLSWN-EL-----EPNGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 113 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~Y~-~~-----~~~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
.+.|+||.+.| +.|++|.|+|+|. .++|+ .+ +..+.|.||+.||.|+ .++||||+++
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 71 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIA 71 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCC
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCC
Confidence 46899999986 8999999999997 79999 33 3457999999999997 8999999863
No 45
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.23 E-value=8.4e-12 Score=84.14 Aligned_cols=57 Identities=25% Similarity=0.280 Sum_probs=49.4
Q ss_pred EEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEE-e-----CCCCCcEEEECCCCEEE-ecCCcccccC
Q psy8644 113 SLSIPEDVPV--GTVVQVVSASDADLGVNSKLSWN-E-----LEPNGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 113 ~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~Y~-~-----~~~~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
.+.|+||.++ |+.|++|.|+|+|. .++|+ . ++..+.|.||+.||.|+ .++||||+++
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 72 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIA 72 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCS
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCC
Confidence 5789999998 89999999999997 58999 3 23458999999999997 8999999863
No 46
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.18 E-value=2e-11 Score=83.66 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=49.9
Q ss_pred ceEEEEeCCCCCCcE--EEEEEEEeCCCCCCceEEEE-eC-----CCCCcEEEECCCCEEE-ecCCccccc
Q psy8644 111 QYSLSIPEDVPVGTV--VQVVSASDADLGVNSKLSWN-EL-----EPNGLFSSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 111 ~y~~~v~E~~~~g~~--v~~v~A~D~D~g~n~~v~Y~-~~-----~~~~~F~Id~~tG~i~-~~~LD~E~~ 172 (173)
.|.++|+|++++|+. |+++ |.|.|.|+.|+|+ .+ +..++|.|++.||.|+ .++||||+.
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 73 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELI 73 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTC
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccC
Confidence 368999999999995 5555 7888899999999 33 4578999999999997 899999975
No 47
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.17 E-value=4.1e-12 Score=89.07 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=52.5
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceE---EEE--eCCCCCcEEEECCCCEEE-ecCCccccc
Q psy8644 109 VSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKL---SWN--ELEPNGLFSSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 109 ~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v---~Y~--~~~~~~~F~Id~~tG~i~-~~~LD~E~~ 172 (173)
..+|.++|+|+.++|+.|++| |+|+|.+. +.+ +|+ .++..++|.||+.||.|+ .++||||+.
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~ 77 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREEL 77 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTT
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhh
Confidence 456788999999999999999 99988764 334 788 456678999999999997 899999975
No 48
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.15 E-value=2.7e-10 Score=86.47 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=65.5
Q ss_pred eeEEecc--CCCcE---EEEcCCCCC--CCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EEE
Q psy8644 14 HWSISKL--LESRY---LHLRPKSGM--YAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WLK 73 (173)
Q Consensus 14 ~~~i~e~--~~~~v---~~~d~d~~~--~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~ 73 (173)
...++|+ +++.+ .|.|+|.+. .|+.++|+| ..|+|++.+|.|++. .++||||.. .|.
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~---~~~LD~E~~~~y~l~ 190 (213)
T 3qrb_A 114 EGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVL---TSGLDRESYPTYTLV 190 (213)
T ss_dssp EEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEEC---SSCCCTTTCCEEEEE
T ss_pred EEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEc---cCCCCCccCceEEEE
Confidence 4567775 44554 456888872 489999999 279999999999885 268999998 999
Q ss_pred EEEEeCCCCCCCCceeEEEEEEEEee
Q psy8644 74 VENTKHKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 74 v~a~dd~g~~p~~~~~~~~v~I~V~d 99 (173)
|+|+ |.|. | ++++++.|.|+|.|
T Consensus 191 V~A~-D~g~-~-~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 191 VQAA-DLQG-E-GLSTTAKAVITVKD 213 (213)
T ss_dssp EEEE-TGGG-T-SCEEEEEEEEEEEC
T ss_pred EEEE-eCCC-C-CceEEEEEEEEEEC
Confidence 9999 8887 7 89999999999987
No 49
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.15 E-value=1.9e-11 Score=83.09 Aligned_cols=58 Identities=14% Similarity=0.269 Sum_probs=47.8
Q ss_pred EEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEE-eC-CC----CCcEEEECCCCEEE-ecCCcccccC
Q psy8644 113 SLSIPEDVP--VGTVVQVVSASDADLGVNSKLSWN-EL-EP----NGLFSSDLRVEWVI-NRSVDQHTNK 173 (173)
Q Consensus 113 ~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~-~~-~~----~~~F~Id~~tG~i~-~~~LD~E~~~ 173 (173)
.++|+|+.+ .|+.|++|.| |.|.|++|+|+ .+ +. .++|.||+.||.|+ .++||||++.
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~ 76 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIA 76 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCC
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCC
Confidence 468999998 5889999999 34689999999 33 21 46899999999997 8999999863
No 50
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.13 E-value=4.9e-10 Score=84.51 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=63.8
Q ss_pred eeEEecc--CCCcE---EEEcCCC---CCCCCeEEEEE----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEe
Q psy8644 14 HWSISKL--LESRY---LHLRPKS---GMYAPAFTFSI----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTK 78 (173)
Q Consensus 14 ~~~i~e~--~~~~v---~~~d~d~---~~~n~~i~Ysi----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~d 78 (173)
+..++|+ +++.+ .|.|+|. | .|+.++|+| ..|.|+ .+|.|++. .++||||.. .|.|.|+|
T Consensus 110 ~~~v~E~~~~gt~v~~v~A~D~D~~~~g-~n~~i~Y~i~~~~~~F~I~-~tG~i~~~---~~~LD~E~~~~y~l~V~A~D 184 (203)
T 3ppe_A 110 NGSVPEMSRLGTSVTKVTAEDADDPTVA-GHATVTYQIIKGNEYFTVD-DSGVIFTA---RADLDRESQSAYEIIVKAKD 184 (203)
T ss_dssp EEEEETTCCTTCEEEECCEECCSCTTSS-STTCEEEEEEESTTTEEEC-TTSEEEES---CSCCCTTTCSEEEEEEEEEE
T ss_pred EEEEeccCCCCcEEEEEEEEcCCCcCCC-CceEEEEEEeCCCCcEEEe-CCeEEEEC---CcCCCcccCCEEEEEEEEEe
Confidence 4567774 45544 4557774 4 488999999 789999 99999885 389999998 99999994
Q ss_pred CCCCCCCCceeEEEEEEEEee
Q psy8644 79 HKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 79 d~g~~p~~~~~~~~v~I~V~d 99 (173)
..|. | ++++++.|.|+|.|
T Consensus 185 ~~G~-p-~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 185 ALGL-T-GESSTATVIIRLTD 203 (203)
T ss_dssp TTCC-C-CSSSEEEEEEEEEC
T ss_pred CCCC-C-CCeEEEEEEEEEEC
Confidence 4487 8 79999999999987
No 51
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.09 E-value=2.9e-12 Score=86.87 Aligned_cols=62 Identities=26% Similarity=0.352 Sum_probs=52.1
Q ss_pred CceEEEEeCCCCCCcEEEEEEEEeCCCCCC--ceEEEE--eCCCCCcEEEECCCCEEE-ecCCccccc
Q psy8644 110 SQYSLSIPEDVPVGTVVQVVSASDADLGVN--SKLSWN--ELEPNGLFSSDLRVEWVI-NRSVDQHTN 172 (173)
Q Consensus 110 ~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n--~~v~Y~--~~~~~~~F~Id~~tG~i~-~~~LD~E~~ 172 (173)
.++.++|+|+.++|+.|++| |.|+|.+.+ +.+.|+ .++..++|.||+.||.|+ .++||||+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~ 69 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREEL 69 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHH
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccc
Confidence 46788999999999999999 999886532 357888 455678999999999997 899999963
No 52
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.08 E-value=8.9e-10 Score=83.26 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=62.1
Q ss_pred eeEEecc--CCCcE---EEEcCCC---CCCCCeEEEEE----eeEEEECCCcEEEEecCCCCCCcCccc---EEEEEEEe
Q psy8644 14 HWSISKL--LESRY---LHLRPKS---GMYAPAFTFSI----AKFIANPTTRLYKNVGTLKRALRTEEH---WLKVENTK 78 (173)
Q Consensus 14 ~~~i~e~--~~~~v---~~~d~d~---~~~n~~i~Ysi----~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v~a~d 78 (173)
+..++|+ .++.+ .|.|+|. | .|+.++|+| ..|.|++.+|.|++. .++||||.. .|.|+|+
T Consensus 112 ~~~v~E~~~~gt~v~~v~A~D~D~~~~g-~n~~i~Y~i~~~~~~F~Id~~tG~i~~~---~~~lD~E~~~~y~l~V~A~- 186 (207)
T 3lnd_A 112 TATVPEMADVGTFVVQVTATDADDPTYG-NSAKVVYSILQGQPYFSVESETGIIKTA---LLNMDRENREQYQVVIQAK- 186 (207)
T ss_dssp EEEEESSCCTTCEEEECCEECSSCTTSS-STTCCEEEEEESGGGEEECTTTCEEEEC---CSSCCC--CCEEEEEEEEE-
T ss_pred EEEEeCCCCCCCEEEEEEEEeCCCCCCC-CCcEEEEEEcCCCCCEEEcCCCcEEEEC---cccCCcccCCEEEEEEEEE-
Confidence 3466764 45554 4557887 5 488999999 789999999999886 378999988 9999999
Q ss_pred CCCCCCCCceeEEEEEEEEee
Q psy8644 79 HKGSNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 79 d~g~~p~~~~~~~~v~I~V~d 99 (173)
|.|..+.++++++.|.|+|.|
T Consensus 187 D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 187 DMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp SGGGCTTCBEEEEEEEEEEEC
T ss_pred ECCCCCCCcEeEEEEEEEEeC
Confidence 766512268999999999987
No 53
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.07 E-value=3.8e-11 Score=81.31 Aligned_cols=81 Identities=20% Similarity=0.184 Sum_probs=58.9
Q ss_pred eeeEEeccC--CCcEEEEcCCCCCCC---CeEEEEE------eeEEEECCCcEEEEecCCCCCCcCccc-------EEEE
Q psy8644 13 NHWSISKLL--ESRYLHLRPKSGMYA---PAFTFSI------AKFIANPTTRLYKNVGTLKRALRTEEH-------WLKV 74 (173)
Q Consensus 13 ~~~~i~e~~--~~~v~~~d~d~~~~n---~~i~Ysi------~~F~Id~~tG~i~~~~~~~~~LD~E~~-------~l~v 74 (173)
.+|+++|.. ++.|..+..|.+... +.++|+| .+|.|++.||.|++. ++||||.. .+.+
T Consensus 5 ~~~~V~E~~~~Gt~Vg~va~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~----~~LDRE~~~~~~~~~~~~~ 80 (103)
T 1wuz_A 5 IHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVN----SRIDREELCGRSAECSIHL 80 (103)
T ss_dssp EEEEEESSCCTTCBCCCHHHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEEC----SCCSHHHHCSSSSSCEEEE
T ss_pred EEEEEECCCCCCCEEEEEEeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEEC----CcCccccccCCCCcEEEEE
Confidence 456777754 555555522333211 3578999 689999999999999 99999974 5666
Q ss_pred EEEeCCCCCCCCceeEEEEEEEEeeCCCC
Q psy8644 75 ENTKHKGSNPGPLVGTCNTTIIVEDQNDN 103 (173)
Q Consensus 75 ~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn 103 (173)
++. . +. | . ..+.|.|+|+|+|||
T Consensus 81 ~v~-~-~~-p--~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 81 EVI-V-DR-P--L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEE-E-TT-T--T-EEEEEEEEEECCSCC
T ss_pred EEE-E-CC-C--C-EEEEEEEEEEEcCCC
Confidence 666 3 23 4 3 478999999999998
No 54
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.04 E-value=5.6e-10 Score=86.51 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=62.4
Q ss_pred eEEeccC--CCcEE--------EEcCCCCCCCCeEEEEE----------eeEEEEC-CCcEEEEecCCCCCCcCccc---
Q psy8644 15 WSISKLL--ESRYL--------HLRPKSGMYAPAFTFSI----------AKFIANP-TTRLYKNVGTLKRALRTEEH--- 70 (173)
Q Consensus 15 ~~i~e~~--~~~v~--------~~d~d~~~~n~~i~Ysi----------~~F~Id~-~tG~i~~~~~~~~~LD~E~~--- 70 (173)
..++|+. ++.++ |.|+|.|. |+.|+|+| ..|.|++ .||.|++. ++||||..
T Consensus 134 ~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~-N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~----~~LD~E~~~~y 208 (242)
T 4apx_B 134 ATVNELTPVGTTIFTGFSGDNGATDIDDGP-NGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLR----KRLNYEDKTRY 208 (242)
T ss_dssp EEEETTCCTTCEEECTTTTTTSEECCSSGG-GGCEEEEEECCTTSTTHHHHEECSSTTTCCEEEC----SCCCTTTCCEE
T ss_pred eEeeeccCCCCEEEEeeecccccccCCCCc-CCceEEEEecCCCCcccccceEEcCCCceEEEEC----CcCChhhCCEE
Confidence 4567654 44443 77999986 89999999 3699995 59999999 99999988
Q ss_pred EEEEEEEeCCCCCCC--CceeEEEEEEEEee
Q psy8644 71 WLKVENTKHKGSNPG--PLVGTCNTTIIVED 99 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~--~~~~~~~v~I~V~d 99 (173)
.|.|+|+ |.|. |. .+++.+.|+|+|..
T Consensus 209 ~l~V~A~-D~G~-~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 209 YVIIQAN-DRAQ-NLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp EEEEEEE-ECCS-SGGGCCEEEEEEEEEEEC
T ss_pred EEEEEEE-ECCc-CchhcccCCceEEEEEee
Confidence 9999999 7777 51 36788889888874
No 55
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.00 E-value=2.8e-09 Score=81.03 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=62.9
Q ss_pred eeEEecc--CCCcEEEE---cCCCC-CCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCcc--c---EE
Q psy8644 14 HWSISKL--LESRYLHL---RPKSG-MYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEE--H---WL 72 (173)
Q Consensus 14 ~~~i~e~--~~~~v~~~---d~d~~-~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~--~---~l 72 (173)
+..++|+ .++.+..+ |+|.+ ..|+.++|+| ++|.|++.+|.|++. ...+.||||. . .|
T Consensus 114 ~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~-~~~~~LD~E~~~~~~y~l 192 (218)
T 3k5r_A 114 IGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTV-VSPALLDRETLENPKYEL 192 (218)
T ss_dssp EEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEEC-SCGGGCCGGGCSCSEEEE
T ss_pred EEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEe-ccCCCCCccccCCCeEEE
Confidence 3567775 45555544 66762 2489999999 149999999999876 1114899998 5 99
Q ss_pred EEEEEeCCC--CCCCCceeEEEEEEEEee
Q psy8644 73 KVENTKHKG--SNPGPLVGTCNTTIIVED 99 (173)
Q Consensus 73 ~v~a~dd~g--~~p~~~~~~~~v~I~V~d 99 (173)
.|+|+ |.| . | ++++++.|.|+|.|
T Consensus 193 ~V~a~-D~gg~~-p-~~sst~~v~I~V~D 218 (218)
T 3k5r_A 193 IIEAQ-DMAGLD-V-GLTGTATATIVIDD 218 (218)
T ss_dssp EEEEE-ECSSTT-T-TCEEEEEEEEEEEC
T ss_pred EEEEE-ECCCCC-C-CeeEEEEEEEEEEC
Confidence 99999 666 5 7 89999999999987
No 56
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=98.99 E-value=1.3e-09 Score=82.98 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=63.0
Q ss_pred eeEEeccC--CCcEEE---EcCCCC-CCCCeEEEEE----------eeEEEECCCcEEEEecCCCCCCcCccc---EEEE
Q psy8644 14 HWSISKLL--ESRYLH---LRPKSG-MYAPAFTFSI----------AKFIANPTTRLYKNVGTLKRALRTEEH---WLKV 74 (173)
Q Consensus 14 ~~~i~e~~--~~~v~~---~d~d~~-~~n~~i~Ysi----------~~F~Id~~tG~i~~~~~~~~~LD~E~~---~l~v 74 (173)
+..++|+. ++.+.. .|+|.+ ..|+.|+|+| ..|.|++.+|.|++. .++||||.. .|.|
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~---~~~LD~E~~~~y~l~V 190 (215)
T 2qvi_A 114 NGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITV---AAGLDREKVQQYTLII 190 (215)
T ss_dssp EEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEEC---SCCCCTTTCSEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEe---cCCCCcccCCeEEEEE
Confidence 45677754 555544 467773 3589999999 269999999999984 278999998 9999
Q ss_pred EEEeCCCCCCC--CceeEEEEEEEEee
Q psy8644 75 ENTKHKGSNPG--PLVGTCNTTIIVED 99 (173)
Q Consensus 75 ~a~dd~g~~p~--~~~~~~~v~I~V~d 99 (173)
+|+ |.|. |. ++++++.|.|+|.|
T Consensus 191 ~a~-D~g~-~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 191 QAT-DMEG-NPTYGLSNTATAVITVTD 215 (215)
T ss_dssp ECC-TTTT-CTTTSCCCEEEEEEEECC
T ss_pred EEE-ECCC-CCCCCcceEEEEEEEEEC
Confidence 999 7766 31 47899999999987
No 57
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=83.66 E-value=8.4 Score=26.29 Aligned_cols=35 Identities=6% Similarity=0.140 Sum_probs=19.9
Q ss_pred ceeeeeeEEeccCCCcEEEEcCCCCC-CCCeEEEEE
Q psy8644 9 GYEYNHWSISKLLESRYLHLRPKSGM-YAPAFTFSI 43 (173)
Q Consensus 9 ~~~~~~~~i~e~~~~~v~~~d~d~~~-~n~~i~Ysi 43 (173)
.|+..+|.+.|..+...+.+....+. ....|.|+.
T Consensus 8 ~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t 43 (137)
T 3ead_A 8 YFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYET 43 (137)
T ss_dssp EESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEEE
T ss_pred EEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEEe
Confidence 35667888999888755555432221 123455554
No 58
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=78.83 E-value=21 Score=27.77 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=67.0
Q ss_pred ceeeeeeEEeccCCCcEEEEcCCCCCC--CCeEEEEE---------------eeEEEECC--CcEEEEecCCCCCCc---
Q psy8644 9 GYEYNHWSISKLLESRYLHLRPKSGMY--APAFTFSI---------------AKFIANPT--TRLYKNVGTLKRALR--- 66 (173)
Q Consensus 9 ~~~~~~~~i~e~~~~~v~~~d~d~~~~--n~~i~Ysi---------------~~F~Id~~--tG~i~~~~~~~~~LD--- 66 (173)
.|+..+|.+.|..+...+.+....|.. ...|.|+. +...+.+. +..|.+ .-+|
T Consensus 13 ~f~~~~y~V~E~~G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~kti~V-----~IidD~~ 87 (295)
T 3us9_A 13 FFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRV-----GIIDDDI 87 (295)
T ss_dssp EESCSEEEEEGGGSCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCEEEEEE-----CCCCCSS
T ss_pred EecCCeEEEecCceEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceEEEEEE-----EEeCCCc
Confidence 467788999999998766665443221 34567776 22333322 122222 2233
Q ss_pred Cccc-EEEEEEEeCCC--------------CCCC-CceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEE
Q psy8644 67 TEEH-WLKVENTKHKG--------------SNPG-PLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVS 130 (173)
Q Consensus 67 ~E~~-~l~v~a~dd~g--------------~~p~-~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~ 130 (173)
+|.. .|.|..+.... ..+. .+-.....+|+|.| ||++|.|....-...|.|+. |.....|.
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~ 164 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVL 164 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEE
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEE
Confidence 2333 77777773220 0000 12223456677777 68889765444467788873 66555554
Q ss_pred EEeCCCCCCceEEEE
Q psy8644 131 ASDADLGVNSKLSWN 145 (173)
Q Consensus 131 A~D~D~g~n~~v~Y~ 145 (173)
-+- +....-.|.|.
T Consensus 165 Rs~-~~~g~VtV~y~ 178 (295)
T 3us9_A 165 RTS-GARGNVIVPYK 178 (295)
T ss_dssp EES-CCCSCEEEEEE
T ss_pred EEc-CCCccEEEEEE
Confidence 432 22122345665
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=76.70 E-value=24 Score=27.40 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=65.5
Q ss_pred ceeeeeeEEeccCCCcEEEEcCCCCC-CCCeEEEEE---------------eeEEEECC--CcEEEEecCCCCCCcCccc
Q psy8644 9 GYEYNHWSISKLLESRYLHLRPKSGM-YAPAFTFSI---------------AKFIANPT--TRLYKNVGTLKRALRTEEH 70 (173)
Q Consensus 9 ~~~~~~~~i~e~~~~~v~~~d~d~~~-~n~~i~Ysi---------------~~F~Id~~--tG~i~~~~~~~~~LD~E~~ 70 (173)
.|+..+|.+.|..+...+.+....+. ....|.|+. +...+.+. +..|.+.+. .---+|..
T Consensus 13 ~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~kti~V~I~--dD~~~E~d 90 (298)
T 3rb5_A 13 YFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVI--DDDVFEED 90 (298)
T ss_dssp EESSSEEEEETTSCCEECCEEECSCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEECCEECBC--CCSSCCCC
T ss_pred EEeCCEEEEecCceEEEEEEEEECCCCccEEEEEEeeCCccCCCCCccccceEEEECCCceEEEEEEEEe--CCCCccCc
Confidence 35667889999887654444332221 134467765 22222221 111222211 11112333
Q ss_pred -EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy8644 71 -WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145 (173)
Q Consensus 71 -~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~ 145 (173)
.|.|..+...+. . .+-.....+|+|.| ||++|.|....-..+|.|+. |.....|.-+-.- ...-.|.|+
T Consensus 91 EtF~v~Ls~p~~~-a-~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~-~g~vtV~~~ 160 (298)
T 3rb5_A 91 ECFYIRLFNPSEG-V-KLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGA-RGTVIVPYW 160 (298)
T ss_dssp EEEEEEEECCCTT-C-CBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCC-CSCEEEEEE
T ss_pred EEEEEEEeCCCCC-c-EECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecC-CCCEEEEEE
Confidence 788877732222 1 33333456677777 77889876555567888974 6666565544321 122345665
No 60
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=65.70 E-value=12 Score=26.54 Aligned_cols=62 Identities=27% Similarity=0.281 Sum_probs=44.4
Q ss_pred CCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEeCCCCCcEEEECCCCEEE-ecC
Q psy8644 101 NDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWNELEPNGLFSSDLRVEWVI-NRS 166 (173)
Q Consensus 101 Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~~~~~~~~F~Id~~tG~i~-~~~ 166 (173)
-...|-|....|...++-....|..|++|.-.|.. .+..+.|...+ ..-|.|++ .|.|+ .++
T Consensus 30 ~~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ssD-p~dFkV~~-DGtVya~r~ 92 (159)
T 1op4_A 30 ALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESSE-PADFKVDE-DGTVYAVRS 92 (159)
T ss_dssp CCCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECCC-SSEEEEET-TTEEEEESC
T ss_pred ccccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcCC-CCCeEEeC-CCcEEEecc
Confidence 34568899999977788888899999999887764 44556776332 23799975 66665 554
No 61
>1pby_A Quinohemoprotein amine dehydrogenase 60 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jju_A*
Probab=53.47 E-value=44 Score=27.93 Aligned_cols=51 Identities=25% Similarity=0.283 Sum_probs=35.2
Q ss_pred EEECCCcEEEEecCCCCCCcCccc-------EEEEEEEe-CCCCCCCCceeEEEEEEEEeeCCCCCC
Q psy8644 47 IANPTTRLYKNVGTLKRALRTEEH-------WLKVENTK-HKGSNPGPLVGTCNTTIIVEDQNDNNP 105 (173)
Q Consensus 47 ~Id~~tG~i~~~~~~~~~LD~E~~-------~l~v~a~d-d~g~~p~~~~~~~~v~I~V~d~Ndn~P 105 (173)
+|+.+ |...-. ....+-|.. .|.|.|+- +.|. +++.+..+.|+|..-|| ||
T Consensus 429 ~~~~~-G~F~p~---~aGpNp~R~~~tnN~Gnl~VvAt~~~~~~---~l~~~~~livtvqr~~~-pp 487 (489)
T 1pby_A 429 SIDDT-GLFTPA---EAGPNPERPMQTNNAGNLKVIATVDAEGE---PLSAEAHLYATVQRFVD-AP 487 (489)
T ss_dssp EECTT-SEEEEC---BCSCCTTSGGGCCSCEEEEEEEECCSSSC---CCEEEEEEEEECCCSCC-CS
T ss_pred eeccC-ceECCC---CCCCCcccccccCCccceEEEEEEccCCc---cccceeeEEEEeeccCC-CC
Confidence 45555 777665 233333333 89999983 4455 79999999999998886 54
No 62
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.29 E-value=41 Score=21.48 Aligned_cols=27 Identities=7% Similarity=0.230 Sum_probs=21.1
Q ss_pred EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCC
Q psy8644 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQND 102 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Nd 102 (173)
.|.+.++|..|. +++..+.|+|...+.
T Consensus 72 ~f~LTVtD~~G~-----s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 72 VFTLTVKDERNL-----QSQSSVNVIVKEESG 98 (102)
T ss_dssp EEEEEEEBTTCC-----EEEEEEEEEEECCSS
T ss_pred EEEEEEEeCCCC-----EEEeEEEEEEcCCCC
Confidence 899999966665 678888999887553
No 63
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=41.78 E-value=87 Score=21.84 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=19.5
Q ss_pred eeeeeeEEeccCCCcEEEEcCCCCCCC--CeEEEEE
Q psy8644 10 YEYNHWSISKLLESRYLHLRPKSGMYA--PAFTFSI 43 (173)
Q Consensus 10 ~~~~~~~i~e~~~~~v~~~d~d~~~~n--~~i~Ysi 43 (173)
|+...|++.|..+...+.+-...|..+ ..|.|+.
T Consensus 27 F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T 62 (160)
T 3gin_A 27 FEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRT 62 (160)
T ss_dssp ESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEE
T ss_pred EeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEE
Confidence 566778888887765555543333222 3455654
No 64
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=41.38 E-value=46 Score=21.56 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=26.9
Q ss_pred CCCcCccc---EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCC
Q psy8644 63 RALRTEEH---WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNP 105 (173)
Q Consensus 63 ~~LD~E~~---~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P 105 (173)
...|..+. .++..++|..|. .+++..+|+|.+..+..|
T Consensus 51 g~Vdt~k~G~Y~VtY~VtDs~Gn-----~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 51 GEVDTTKAGTYVLTYTVTDSKGH-----EVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp SCCCSSSCEEEEEEEEEECTTSC-----EEEEEEEEEEECSSCCCC
T ss_pred CcccCCCceEEEEEEEEEcCCCC-----EEEEEEEEEEeCCCcccC
Confidence 66676555 888899966666 567778888887655444
No 65
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=40.23 E-value=98 Score=22.01 Aligned_cols=63 Identities=21% Similarity=0.185 Sum_probs=35.4
Q ss_pred EEEEEEEeCCCCCCCCceeEEEEEEEEeeCCCCCCccCCCceEEEEeCCCC---CC-cEEEEEEEEeCCCCCCceEEEE
Q psy8644 71 WLKVENTKHKGSNPGPLVGTCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVP---VG-TVVQVVSASDADLGVNSKLSWN 145 (173)
Q Consensus 71 ~l~v~a~dd~g~~p~~~~~~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~---~g-~~v~~v~A~D~D~g~n~~v~Y~ 145 (173)
.|+++|+|..|. . +....+.|.|.+ ..+|.. .+.-+.+.. .| .+-++..|+|.|. .-.++.|.
T Consensus 64 tlta~A~D~aGn-~---s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~ 130 (190)
T 3pdd_A 64 NLKAVAVLSDGR-R---IESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFL 130 (190)
T ss_dssp EEEEEEEETTSC-E---EECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEE
T ss_pred EEEEEEEECCCC-E---eeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEE
Confidence 999999987777 2 233346777765 446632 344444322 24 3456677777652 22344444
No 66
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=32.10 E-value=1.3e+02 Score=21.07 Aligned_cols=51 Identities=8% Similarity=0.061 Sum_probs=35.8
Q ss_pred CcEEEEcCCCCCCCCeEEEEE--e-eEEEECCCcEEEEecCCCCCCcCcc--cEEEEEEEe
Q psy8644 23 SRYLHLRPKSGMYAPAFTFSI--A-KFIANPTTRLYKNVGTLKRALRTEE--HWLKVENTK 78 (173)
Q Consensus 23 ~~v~~~d~d~~~~n~~i~Ysi--~-~F~Id~~tG~i~~~~~~~~~LD~E~--~~l~v~a~d 78 (173)
..+..+.-++=..+..+.|.- . -|.|+.+ |.+++. +++-.-. ..|.|.|.|
T Consensus 53 ~~lgkV~F~dC~g~~~~~~~ssDp~dFkV~~D-GtVya~----r~v~L~~~~~~F~V~a~D 108 (159)
T 1op4_A 53 QPLLNVKFSNCNRKRKVQYESSEPADFKVDED-GTVYAV----RSFPLTAEQAKFLIYAQD 108 (159)
T ss_dssp CCEEECCCBCCSSCCCEEEECCCSSEEEEETT-TEEEEE----SCCSCSSSCEEEEEEEEE
T ss_pred ceeceeecccCCCCCceeEEcCCCCCeEEeCC-CcEEEe----cceeecCCCcEEEEEEEc
Confidence 345566533222367788888 6 9999997 889898 8754433 399999995
No 67
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=32.03 E-value=2.1e+02 Score=23.49 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=38.1
Q ss_pred CCeEEEEE-----e-----eEEEE-CCCcEEEEecCCCCCCcCccc--EEEEEEEeCCCCCCCCceeEEEEEEEE
Q psy8644 36 APAFTFSI-----A-----KFIAN-PTTRLYKNVGTLKRALRTEEH--WLKVENTKHKGSNPGPLVGTCNTTIIV 97 (173)
Q Consensus 36 n~~i~Ysi-----~-----~F~Id-~~tG~i~~~~~~~~~LD~E~~--~l~v~a~dd~g~~p~~~~~~~~v~I~V 97 (173)
+..++|+- . ..+|. +.+..++++ .+-+-... .|.+.++ |.+. | .+++...|.|+|
T Consensus 369 GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft----~P~~~~~~tl~f~LtVT-D~~~-p-~lTs~~rViVtV 436 (437)
T 2yhg_A 369 GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQ----IPSNAGGKDIHILLTLR-DNGS-P-NLYAYRRVVINV 436 (437)
T ss_dssp CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEE----CCTTCTTCEEEEEEEEE-ECSS-S-CCEEEEEEEEEE
T ss_pred CCeEEEEEEEeCCCCccccceEeecCCCceEEEE----eCCCCCCcEEEEEEEEE-eCCC-C-CccEEeEEEEEe
Confidence 45689988 2 45664 444567776 55443333 9999999 7776 6 789999998887
No 68
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=26.71 E-value=79 Score=22.07 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=24.7
Q ss_pred EEEEEEEEeeCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy8644 90 TCNTTIIVEDQNDNNPIFPVSQYSLSIPEDVPVGTVVQVVSASDADLGVNSKLSWN 145 (173)
Q Consensus 90 ~~~v~I~V~d~Ndn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~ 145 (173)
.+.+.+.|.| ||..+.|....-..+|.|+. |++-.+|.-+..+.+....|.|+
T Consensus 9 ~~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~ 61 (160)
T 3gin_A 9 SAALEVLFQG-PGPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFR 61 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEE
T ss_pred cceEEEEEec-CCCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEE
Confidence 3456677776 55677666555567788874 66555554443443334467787
No 69
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=22.78 E-value=1.6e+02 Score=18.94 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=16.9
Q ss_pred cCcceeeeeeEEeccCCCcEEEEc
Q psy8644 6 IGKGYEYNHWSISKLLESRYLHLR 29 (173)
Q Consensus 6 ~~~~~~~~~~~i~e~~~~~v~~~d 29 (173)
|--.|+..+|.+.|..+...+.+-
T Consensus 3 i~i~F~~~~y~V~E~~g~~~v~V~ 26 (114)
T 3e9t_A 3 IRMYFEPGHYTVMENCGEFEVRVV 26 (114)
T ss_dssp EEEEESSSEEEEETTCCEEEEEEE
T ss_pred EEEEEeCCEEEEEcCCeEEEEEEE
Confidence 444577888999998876555554
Done!