BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8646
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6QLT2|MTMR2_BOVIN Myotubularin-related protein 2 OS=Bos taurus GN=MTMR2 PE=2 SV=1
Length = 643
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 31/186 (16%)
Query: 20 ASSDSLGSDSKSSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLC 79
SSDS+ + +++ S + ++ +E + + EP PLLPGE I+ A++VTY+C
Sbjct: 45 VSSDSISTSAENFSPDLRVLRESNKLAEMEEP---------PLLPGENIKDMAKDVTYIC 95
Query: 80 PYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRS 124
P++G RG L+VTNY+LYF+S++R+ P+V++ LGV+ S L T
Sbjct: 96 PFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVISRVEKIGGASSRGENSYGLETVC 155
Query: 125 NDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMN 182
DI + HK + +F+ + +YAFPVS+ L EY + F + GW + +
Sbjct: 156 KDIRNLRFAHK-PEGRTRRSIFENLMKYAFPVSNNLSLFA---FEYKE-VFPENGWKLYD 210
Query: 183 QYAELR 188
+E R
Sbjct: 211 SLSEYR 216
>sp|A0JMK5|MTMR2_DANRE Myotubularin-related protein 2 OS=Danio rerio GN=mtmr2 PE=2 SV=2
Length = 620
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 27/193 (13%)
Query: 19 NASSDSLGSDSKSSSLNSKLGQEP----AQPSNNNEPIQTSRPD----DLPLLPGEIIQG 70
+AS DS+ S S++ S P + + PI+ D +LPLLP E++Q
Sbjct: 4 SASVDSVESLCSSTTTRSDRSSGPKVSDTELRSKGRPIEKMYKDPSKGELPLLPVELVQE 63
Query: 71 FAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVS----IKLNTRSND 126
A++VTY+CP+ GP RG L+VTNY+L+FR DRE + +++PLGV+S I T D
Sbjct: 64 SAKDVTYICPFIGPIRGSLTVTNYRLFFRCTDREPVFGLDLPLGVLSRVEKIGAATGRGD 123
Query: 127 IWF-----------WLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRK 175
+ + ++HK + +F+ + ++AFPVS+ + EY F +
Sbjct: 124 VSYGLACKDMRNLRFVHKEPDDSLKKSVFEVLMKFAFPVSNNMSLFA---FEY-KQVFPE 179
Query: 176 MGWNIMNQYAELR 188
GW + + AE +
Sbjct: 180 NGWKVYDPLAECK 192
>sp|Q13614|MTMR2_HUMAN Myotubularin-related protein 2 OS=Homo sapiens GN=MTMR2 PE=1 SV=4
Length = 643
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 31/186 (16%)
Query: 20 ASSDSLGSDSKSSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLC 79
SSDS+ + + + S + ++ +E + + EP PLLPGE I+ A++VTY+C
Sbjct: 45 VSSDSISTSADNFSPDLRVLRESNKLAEMEEP---------PLLPGENIKDMAKDVTYIC 95
Query: 80 PYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRS 124
P++G RG L+VTNY+LYF+S++R+ P+V++ LGV+ S L T
Sbjct: 96 PFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 155
Query: 125 NDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMN 182
DI + HK + +F+ + +YAFPVS+ L EY + F + GW + +
Sbjct: 156 KDIRNLRFAHK-PEGRTRRSIFENLMKYAFPVSNNLPLFA---FEYKE-VFPENGWKLYD 210
Query: 183 QYAELR 188
E R
Sbjct: 211 PLLEYR 216
>sp|Q5REB9|MTMR2_PONAB Myotubularin-related protein 2 OS=Pongo abelii GN=MTMR2 PE=2 SV=1
Length = 643
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 31/186 (16%)
Query: 20 ASSDSLGSDSKSSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLC 79
SSDS+ + + + S + ++ +E + + EP PLLPGE I+ A++VTY+C
Sbjct: 45 VSSDSISTSADNFSPDLRVLRESNKLAEMEEP---------PLLPGENIKDMAKDVTYIC 95
Query: 80 PYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRS 124
P++G RG L+VTNY+LYF+S++R+ P+V++ LGV+ S L T
Sbjct: 96 PFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 155
Query: 125 NDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMN 182
DI + HK + +F+ + +YAFPVS+ L EY + F + GW + +
Sbjct: 156 KDIRNLRFAHK-PEGRTRRSIFENLMKYAFPVSNNLPLFA---FEYKE-VFPENGWKLYD 210
Query: 183 QYAELR 188
E R
Sbjct: 211 PLLEYR 216
>sp|Q5ZIV1|MTMR2_CHICK Myotubularin-related protein 2 OS=Gallus gallus GN=MTMR2 PE=2 SV=1
Length = 571
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 22/145 (15%)
Query: 61 PLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV---- 116
PLLPGE I+ A++VTY+CP++G RG L+VTNY+LYF+S++R+ P+V++ LGV+
Sbjct: 5 PLLPGETIKDMAKDVTYICPFTGAIRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVE 64
Query: 117 -----------SIKLNTRSNDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVS 163
S L DI + HK + +F+ + +YAFPVS+ L
Sbjct: 65 KIGGASSRGENSYGLEIVCKDIRNLRFAHK-PEGRTRRSIFENLMKYAFPVSNNLPLFA- 122
Query: 164 SIIEYTDNYFRKMGWNIMNQYAELR 188
EY + F + GW + + E R
Sbjct: 123 --FEYKE-VFPENGWKVYDPIWEYR 144
>sp|Q9Z2D1|MTMR2_MOUSE Myotubularin-related protein 2 OS=Mus musculus GN=Mtmr2 PE=1 SV=3
Length = 643
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 22/144 (15%)
Query: 62 LLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV----- 116
LLPGE I+ A++VTY+CP++G RG L+VT+Y+LYF+S++R+ P+V++ LGV+
Sbjct: 78 LLPGENIKDMAKDVTYICPFTGAVRGTLTVTSYRLYFKSMERDPPFVLDASLGVISRVEK 137
Query: 117 ----------SIKLNTRSNDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSS 164
S L T DI + HK + +F+ + +YAFPVS+ L
Sbjct: 138 IGGASSRGENSYGLETVCKDIRNLRFAHK-PEGRTRRSIFENLMKYAFPVSNGLPLFA-- 194
Query: 165 IIEYTDNYFRKMGWNIMNQYAELR 188
EY + F + GW + + E R
Sbjct: 195 -FEYKE-VFPENGWKLYDPLLEYR 216
>sp|Q13613|MTMR1_HUMAN Myotubularin-related protein 1 OS=Homo sapiens GN=MTMR1 PE=1 SV=4
Length = 665
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 7/119 (5%)
Query: 3 RKSSIELLNSESGHH---CNASSDSLGSDSKSSSLNSK-LGQEPAQPSNNNEPIQTSRPD 58
R+ S+E L+S +G H C + S S S+ S+ + ++ + N+ Q +
Sbjct: 40 RQPSVETLDSPTGSHVEWCKQLIAATISSQISGSVTSENVSRDYKALRDGNKLAQM---E 96
Query: 59 DLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVS 117
+ PL PGE I+ ++V Y+CP+ G G L+VT++KLYF++++R+ ++++VPLGV+S
Sbjct: 97 EAPLFPGESIKAIVKDVMYICPFMGAVSGTLTVTDFKLYFKNVERDPHFILDVPLGVIS 155
>sp|Q9Z2C4|MTMR1_MOUSE Myotubularin-related protein 1 OS=Mus musculus GN=Mtmr1 PE=1 SV=1
Length = 669
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
Query: 3 RKSSIELLNSESGHH---CNASSDSLGSDSKSSSLNSK-LGQEPAQPSNNNEPIQTSRPD 58
R SIE L+S +G H C + S S S+ S+ + ++ + N+ Q +
Sbjct: 44 RHPSIETLDSPTGSHVEWCKQLIAATISSQISGSVTSENVSRDYKALRDGNKLAQM---E 100
Query: 59 DLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVS 117
+ PL PGE I+ ++V Y+CP+ G G L+VT++K+YF++++R+ +V++VPLGV+S
Sbjct: 101 EAPLFPGESIKAIVKDVIYICPFMGAVSGTLTVTDFKMYFKNVERDPHFVLDVPLGVIS 159
>sp|Q5EB32|MTM1_XENTR Myotubularin OS=Xenopus tropicalis GN=mtm1 PE=2 SV=1
Length = 602
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 27/174 (15%)
Query: 31 SSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILS 90
S+SL + L + P N+ + D++P LPGE + ++V Y+CP+ GP +G +
Sbjct: 11 SNSLENSLRRSPGDGMNHEQN------DEIPCLPGEALIT-DKDVIYMCPFYGPVKGRIH 63
Query: 91 VTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRSNDIWFWLHKLK 135
VTNYKLYF+ + E VPLGV+ S L+ D+ LK
Sbjct: 64 VTNYKLYFKGEEMEPLISFSVPLGVIARIEKMGGASSRGENSYGLDITCKDMRNLRFALK 123
Query: 136 KSLED-EMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELR 188
+ + + +F+++ +YAFP+SH L + F + GW + + E R
Sbjct: 124 QEVHSRKQIFEDLTKYAFPLSHGLLLFAFQ----NEEKFPENGWAVYDAMTEFR 173
>sp|A6QLT4|MTM1_BOVIN Myotubularin OS=Bos taurus GN=MTM1 PE=2 SV=2
Length = 603
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 31/152 (20%)
Query: 58 DDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV- 116
+ LP LPGEI + +EV Y+CP++GP +G + +TNY+LY RS++ ++ +++VPLGV+
Sbjct: 33 ETLPRLPGEI-RITDKEVIYICPFNGPIKGRVYITNYRLYLRSLETDSALILDVPLGVIS 91
Query: 117 --------------SIKLNTRSNDIWFWLHKLKKSLEDEM-----LFDEVQQYAFPVSHK 157
S L+ D L L+ +L+ E +F+ + +YAFP++H
Sbjct: 92 RIEKMGGATSRGENSYGLDITCKD----LRNLRFALKQEGHSRRDMFEILTRYAFPLAHS 147
Query: 158 LCRIVSSIIEY-TDNYFRKMGWNIMNQYAELR 188
L I + + F GW + N E R
Sbjct: 148 L-----PIFAFLNEEKFNVDGWTVYNPVEEYR 174
>sp|Q52KU6|MTM1_XENLA Myotubularin OS=Xenopus laevis GN=mtm1 PE=2 SV=1
Length = 602
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 27/174 (15%)
Query: 31 SSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILS 90
S+SL + + + P N+ + + SR LPGE + +EV Y+CP+ GP +G +
Sbjct: 11 SNSLENSVRRSPGDGINHEQNDEISR------LPGETLIT-DKEVIYMCPFYGPVKGRIY 63
Query: 91 VTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRSNDIWFWLHKLK 135
VTNYKLYF+ + E VPLGV+ S L+ D+ LK
Sbjct: 64 VTNYKLYFKGEEMEPLITFAVPLGVIARIEKMGGASSRGENSYGLDITCKDMRNLRFALK 123
Query: 136 KSLED-EMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELR 188
+ + + +F+++ +YAFP+SH L + F + GW + + E R
Sbjct: 124 QEVHSRKQIFEDLTKYAFPLSHGLLFFAFQ----NEEKFPENGWAVYDAMTEFR 173
>sp|Q5R9S3|MTM1_PONAB Myotubularin OS=Pongo abelii GN=MTM1 PE=2 SV=1
Length = 603
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 27 SDSKSSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPAR 86
+ + +S NS + + + + + + +P LPGE + +EV Y+CP++GP +
Sbjct: 2 ASASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLIT-DKEVIYICPFNGPIK 60
Query: 87 GILSVTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRSND---IW 128
G + +TNY+LY RS++ ++ +++VPLGV+ S L+ D +
Sbjct: 61 GRVYITNYRLYLRSLETDSALILDVPLGVISRIEKMGGATSRGENSYGLDITCKDMRNLR 120
Query: 129 FWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELR 188
F L + S D +F+ + +YAFP++H L + F GW + N E R
Sbjct: 121 FALKQEGHSRRD--MFEILTRYAFPLAHSLPLFAF----LNEEKFNVDGWTVYNPVEEYR 174
>sp|Q13496|MTM1_HUMAN Myotubularin OS=Homo sapiens GN=MTM1 PE=1 SV=2
Length = 603
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 27 SDSKSSSLNSKLGQEPAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPAR 86
+ + +S NS + + + + + + +P LPGE + +EV Y+CP++GP +
Sbjct: 2 ASASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLIT-DKEVIYICPFNGPIK 60
Query: 87 GILSVTNYKLYFRSIDRETPYVVEVPLGVV---------------SIKLNTRSND---IW 128
G + +TNY+LY RS++ ++ +++VPLGV+ S L+ D +
Sbjct: 61 GRVYITNYRLYLRSLETDSSLILDVPLGVISRIEKMGGATSRGENSYGLDITCKDMRNLR 120
Query: 129 FWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELR 188
F L + S D +F+ + +YAFP++H L + F GW + N E R
Sbjct: 121 FALKQEGHSRRD--MFEILTRYAFPLAHSLPLFAF----LNEEKFNVDGWTVYNPVEEYR 174
>sp|Q9Z2C5|MTM1_MOUSE Myotubularin OS=Mus musculus GN=Mtm1 PE=1 SV=2
Length = 603
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 29/151 (19%)
Query: 58 DDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVV- 116
+ +P LPGE++ +EV Y+CP++GP +G + +TNY+LY RS++ ++ +++VPLGV+
Sbjct: 33 ETVPRLPGELLIT-EKEVIYICPFNGPIKGRVYITNYRLYLRSLETDSALILDVPLGVIS 91
Query: 117 --------------SIKLNTRSNDIWFWLHKLKKSLEDEM-----LFDEVQQYAFPVSHK 157
S L+ D L L+ +L+ E +F+ + ++AFP++H
Sbjct: 92 RIEKMGGATSRGENSYGLDITCKD----LRNLRFALKQEGHSRRDMFEILVKHAFPLAHN 147
Query: 158 LCRIVSSIIEYTDNYFRKMGWNIMNQYAELR 188
L + F GW + N E R
Sbjct: 148 LPLFAF----VNEEKFNVDGWTVYNPVEEYR 174
>sp|Q6AXQ4|MTM1_RAT Myotubularin OS=Rattus norvegicus GN=Mtm1 PE=2 SV=2
Length = 602
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 61 PLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI-- 118
P LPGE +EV Y+CP+SGP +G L +TNY+LY RS++ + +++VPLGV+S
Sbjct: 36 PRLPGESAIT-DKEVIYICPFSGPVKGRLYITNYRLYLRSLETDLAPILDVPLGVISRIE 94
Query: 119 ---KLNTRSNDIWFW------LHKLKKSLEDEM-----LFDEVQQYAFPVSHKLCRIVSS 164
+ +R + + L L+ +L+ E +FD + ++AFP+++ L
Sbjct: 95 KMGGVTSRGENSYGLDITCKDLRNLRFALKQEGHSRRDIFDVLTRHAFPLAYNLPLFAF- 153
Query: 165 IIEYTDNYFRKMGWNIMNQYAELR 188
+ F+ GW I N E R
Sbjct: 154 ---VNEEKFKVDGWAIYNPVEEYR 174
>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1
Length = 568
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 77 YLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
Y CP RG S TNYK + R E PYV VP
Sbjct: 285 YTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVP 320
>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1
Length = 568
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 77 YLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
Y CP RG S TNYK + R E PYV VP
Sbjct: 285 YTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVP 320
>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2
Length = 570
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 77 YLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
Y CP RG S TNYK + R E PYV VP
Sbjct: 285 YTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVP 320
>sp|Q31G41|GLND_THICR [Protein-PII] uridylyltransferase OS=Thiomicrospira crunogena
(strain XCL-2) GN=glnD PE=3 SV=1
Length = 888
Score = 34.7 bits (78), Expect = 0.39, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 125 NDIWFWLHKLKKSLEDEMLFDEVQQYAFPVSH 156
N I F LH+LKK ED +LFD QQ A ++H
Sbjct: 265 NRIRFALHRLKKRHEDRLLFDHQQQLAELLNH 296
>sp|Q91853|ZN143_XENLA Zinc finger protein 143 OS=Xenopus laevis GN=znf143 PE=1 SV=2
Length = 565
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 20/45 (44%)
Query: 68 IQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
I+ E Y C G R S TNYK + R E PYV VP
Sbjct: 341 IRTHTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 385
>sp|Q58DZ6|ZN143_XENTR Zinc finger protein 143 OS=Xenopus tropicalis GN=znf143 PE=2 SV=2
Length = 567
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 20/45 (44%)
Query: 68 IQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
I+ E Y C G R S TNYK + R E PYV VP
Sbjct: 341 IRTHTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 385
>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2
Length = 638
Score = 33.5 bits (75), Expect = 0.84, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 18/39 (46%)
Query: 74 EVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
E Y C G R S TNYK + R E PYV VP
Sbjct: 354 ERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 392
>sp|A6QQW0|ZN143_BOVIN Zinc finger protein 143 OS=Bos taurus GN=ZNF143 PE=2 SV=1
Length = 613
Score = 33.5 bits (75), Expect = 0.84, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 18/39 (46%)
Query: 74 EVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
E Y C G R S TNYK + R E PYV VP
Sbjct: 329 ERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 367
>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2
Length = 638
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 18/39 (46%)
Query: 74 EVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
E Y C G R S TNYK + R E PYV VP
Sbjct: 354 ERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 392
>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2
Length = 638
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 18/39 (46%)
Query: 74 EVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
E Y C G R S TNYK + R E PYV VP
Sbjct: 354 ERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 392
>sp|Q13886|KLF9_HUMAN Krueppel-like factor 9 OS=Homo sapiens GN=KLF9 PE=2 SV=1
Length = 244
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 23 DSLGSDSKSSSLNSKLGQEPAQ-PSNNNEPIQTSRPDDLPLLPGEIIQG-FAREVTYLCP 80
+ +GSDS + ++ G P+ P +P P L L PG +G A E + CP
Sbjct: 91 EDMGSDS---DVTTESGSSPSHSPEERQDPGSAPSPLSL-LHPGVAAKGKHASEKRHKCP 146
Query: 81 YSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSIKLNTRSNDI 127
YSG + ++ K ++R E P+ P +K +RS+++
Sbjct: 147 YSGCGKVYGKSSHLKAHYRVHTGERPFPCTWP---DCLKKFSRSDEL 190
>sp|P79288|KLF9_PIG Krueppel-like factor 9 OS=Sus scrofa GN=KLF9 PE=2 SV=3
Length = 244
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 23 DSLGSDSKSSSLNSKLGQEPAQ-PSNNNEPIQTSRPDDLPLLPGEIIQG-FAREVTYLCP 80
+ +GSDS + ++ G P+ P +P P L L PG +G A E + CP
Sbjct: 91 EDMGSDS---DVTTESGSSPSHSPEERQDPGSAPSPLSL-LHPGVAAKGKHASEKRHKCP 146
Query: 81 YSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSIKLNTRSNDI 127
YSG + ++ K ++R E P+ P +K +RS+++
Sbjct: 147 YSGCGKVYGKSSHLKAHYRVHTGERPFPCTWP---DCLKKFSRSDEL 190
>sp|Q1LYE3|ZN143_DANRE Zinc finger protein 143 OS=Danio rerio GN=znf143 PE=2 SV=2
Length = 623
Score = 31.6 bits (70), Expect = 3.7, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 17/39 (43%)
Query: 74 EVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 112
E Y C R S TNYK + R E PYV VP
Sbjct: 347 ERPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVP 385
>sp|A5E0W5|INO80_LODEL Putative DNA helicase ino80 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=INO80 PE=3 SV=1
Length = 1575
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 7 IELLNSESGHHCNASSDSLGSDSKSSSLNSKLGQEPAQPSNNNE 50
I +LN E+ H + S D ++ ++++ S + QEP QP+NN E
Sbjct: 68 INILNDENSHGVDESIDEPVTNGQATNKES-VKQEPTQPTNNTE 110
>sp|P70298|CUX2_MOUSE Homeobox protein cut-like 2 OS=Mus musculus GN=Cux2 PE=2 SV=2
Length = 1426
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 106 PYVVEVPLGVVSIKLNTRSNDIWFWLHKLKKSLEDEMLFDEVQ 148
PY + + ++S +LN ++N + W H + + EML + Q
Sbjct: 1136 PYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRREMLVEGTQ 1178
>sp|O14529|CUX2_HUMAN Homeobox protein cut-like 2 OS=Homo sapiens GN=CUX2 PE=1 SV=4
Length = 1486
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 106 PYVVEVPLGVVSIKLNTRSNDIWFWLHKLKKSLEDEMLFDEVQ 148
PY + + ++S +LN ++N + W H + + EML + Q
Sbjct: 1191 PYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRREMLVEGTQ 1233
>sp|P19269|AMY1_SCHOC Alpha-amylase 1 OS=Schwanniomyces occidentalis GN=AMY1 PE=3 SV=1
Length = 512
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Query: 65 GEIIQGFAREVTYLCPYSGPARGILSVTNYKLYF 98
GE+ QG + TY CPY +G VTNY LY+
Sbjct: 265 GEVYQG---DPTYTCPYQNYMKG---VTNYPLYY 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,223,012
Number of Sequences: 539616
Number of extensions: 2867392
Number of successful extensions: 9242
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 9064
Number of HSP's gapped (non-prelim): 176
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)