Query psy8646
Match_columns 191
No_of_seqs 132 out of 155
Neff 4.5
Searched_HMMs 29240
Date Sat Aug 17 00:09:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lw3_A Myotubularin-related pr 100.0 2.2E-40 7.5E-45 316.7 11.0 185 1-190 4-221 (657)
2 1zsq_A Myotubularin-related pr 100.0 1.1E-31 3.6E-36 251.8 11.9 132 54-190 1-149 (528)
3 2yf0_A Myotubularin-related pr 99.8 3.2E-19 1.1E-23 167.0 5.6 112 70-190 7-137 (512)
4 2cay_A VPS36 PH domain, vacuol 98.2 5E-06 1.7E-10 66.3 8.8 86 53-138 16-122 (145)
5 2hth_B Vacuolar protein sortin 98.1 2.2E-05 7.6E-10 62.0 10.8 60 58-118 9-70 (140)
6 1w7p_D VPS36P, YLR417W; ESCRT- 95.9 0.0012 4.2E-08 62.7 0.0 62 54-118 9-76 (566)
7 3hsa_A Pleckstrin homology dom 95.4 0.064 2.2E-06 41.9 7.9 80 60-151 26-124 (126)
8 1zyi_A Methylosome subunit pic 91.9 0.2 6.7E-06 40.9 4.9 49 63-114 18-68 (171)
9 3b77_A Uncharacterized protein 84.0 1.9 6.4E-05 35.9 5.8 83 60-152 20-123 (193)
10 1pfj_A TFIIH basal transcripti 38.2 70 0.0024 24.0 5.7 81 64-150 4-99 (108)
11 1ou8_A Stringent starvation pr 31.6 58 0.002 24.7 4.3 44 77-123 53-99 (111)
12 2kuq_A Fibroblast growth facto 30.4 1.2E+02 0.004 24.2 6.1 57 86-150 35-104 (153)
13 1msp_A MSP, major sperm protei 30.2 1.7E+02 0.0056 21.6 6.8 54 64-117 6-63 (126)
14 1xr0_B FGFR signalling adaptor 28.4 1.3E+02 0.0046 23.2 6.0 59 85-151 27-98 (129)
15 1ou9_A Stringent starvation pr 26.7 76 0.0026 24.7 4.3 44 77-123 53-99 (129)
16 1yfn_A Stringent starvation pr 26.5 71 0.0024 24.5 4.0 38 86-123 60-100 (118)
17 1t77_A Lipopolysaccharide-resp 24.5 50 0.0017 30.1 3.3 27 76-103 10-36 (414)
18 1cuo_A Protein (azurin ISO-2); 23.6 96 0.0033 23.1 4.3 32 61-92 86-128 (129)
19 2kup_A Fibroblast growth facto 23.4 1.5E+02 0.0052 23.3 5.5 59 85-151 34-105 (146)
20 1j0w_A Downstream of tyrosine 22.1 2.3E+02 0.008 20.7 7.6 62 87-151 23-95 (103)
21 2ccw_A Azurin II, AZN-2; elect 22.0 93 0.0032 23.2 3.9 32 61-92 86-128 (129)
22 1v54_I STA, cytochrome C oxida 22.0 28 0.00095 24.6 0.9 11 180-190 53-63 (73)
No 1
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=100.00 E-value=2.2e-40 Score=316.67 Aligned_cols=185 Identities=38% Similarity=0.645 Sum_probs=119.6
Q ss_pred CCccchhhhccCCCCCCCCCCCCCCCCCCCccCccccCCCCCCCCC----------------CCCCCCCCCCCCCCCCCC
Q psy8646 1 MERKSSIELLNSESGHHCNASSDSLGSDSKSSSLNSKLGQEPAQPS----------------NNNEPIQTSRPDDLPLLP 64 (191)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~s~~~~~s~~~s~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~LLP 64 (191)
|+++++.+.++...++|+|+|+|+++|+++|+++|||++++++..+ ..|++.+.+++++++|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LLP 83 (657)
T 1lw3_A 4 METSSSCESLGSQPAAARPPSVDSLSSASTSHSENSVHTKSASVVSSDSISTSADNFSPDLRVLRESNKLAEMEEPPLLP 83 (657)
T ss_dssp -------------------------------------------------------------------------CCCCCCT
T ss_pred ccccCCccccccccccccCcccccccCCCCCccccccccccccccCCCCCCCCccchhhhhhhhhcccccccCCCCccCC
Confidence 7899999999999999999999999999999999999988875544 236666777889999999
Q ss_pred CceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccCC-------------CCCce--
Q psy8646 65 GEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLNT-------------RSNDI-- 127 (191)
Q Consensus 65 GE~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kigg-------------rg~D~-- 127 (191)
||.|+..+++|+|+||+.|++.|+|+||||||+|.+.+.+++++++|||++|.+ |++| +|+||
T Consensus 84 GE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~CKDfR~ 163 (657)
T 1lw3_A 84 GENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRN 163 (657)
T ss_dssp TCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEE
T ss_pred CeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEecCCcE
Confidence 999999999999999999999999999999999999887778999999999999 7753 47799
Q ss_pred EEEecccCCchhhHHHHHHHhhccccCCCccccccccceeeccCccCCCCcEeechHHHHHhc
Q psy8646 128 WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELREN 190 (191)
Q Consensus 128 lrFa~k~~~~~~~~~vfe~L~~~afPls~~~~LF~~~AF~Y~~n~~~~nGW~IYdp~~Ey~Rq 190 (191)
++|+|+++++. +++||+.|.+++||+++..+|| ||.|++ .++++||.+|||.+||+||
T Consensus 164 ~~f~f~~~~~~-~~~v~~~L~~~~~P~~~~~~lf---AF~y~~-~~~~~Gw~~yd~~~E~~R~ 221 (657)
T 1lw3_A 164 LRFAHKPEGRT-RRSIFENLMKYAFPVSNNLPLF---AFEYKE-VFPENGWKLYDPLLEYRRQ 221 (657)
T ss_dssp EEEECCGGGCC-HHHHHHHHHHHHSSGGGTCCCG---GGTCCC-CCSSCGGGSCCHHHHHHHH
T ss_pred EEEEeCCccch-HHHHHHHHHHHhCCCcccccce---eecccc-cccCCCceecCHHHHHHHh
Confidence 99999987665 8999999999999999988999 999999 7889999999999999997
No 2
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=99.97 E-value=1.1e-31 Score=251.81 Aligned_cols=132 Identities=39% Similarity=0.812 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCCceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccCC---------
Q psy8646 54 TSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLNT--------- 122 (191)
Q Consensus 54 ~~~~~~~~LLPGE~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kigg--------- 122 (191)
++++++++|||||.|+..+++|+|+||++|++.|+|+||||||+|.+.+.+++++++|||++|.+ |++|
T Consensus 1 ~~~~~~~~lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~ 80 (528)
T 1zsq_A 1 MASMEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSY 80 (528)
T ss_dssp ---CCCCCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCS
T ss_pred CCCCCCCccCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCc
Confidence 47899999999999999999999999999999999999999999999887778999999999999 7753
Q ss_pred ----CCCce--EEEecccCCchhhHHHHHHHhhccccCCCccccccccceeeccCccCCCCcEeechHHHHHhc
Q psy8646 123 ----RSNDI--WFWLHKLKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYFRKMGWNIMNQYAELREN 190 (191)
Q Consensus 123 ----rg~D~--lrFa~k~~~~~~~~~vfe~L~~~afPls~~~~LF~~~AF~Y~~n~~~~nGW~IYdp~~Ey~Rq 190 (191)
+|+|| ++|+|+++++. +++||+.|.+++||.++..+|| ||.|++ .++++||.+|||.+||+||
T Consensus 81 ~l~I~CKDfr~~~f~f~~~~~~-~~~v~~~L~~~~~p~~~~~~lf---aF~y~~-~~~~~gw~~y~~~~E~~R~ 149 (528)
T 1zsq_A 81 GLETVCKDIRNLRFAHKPEGRT-RRSIFENLMKYAFPVSNNLPLF---AFEYKE-VFPENGWKLYDPLLEYRRQ 149 (528)
T ss_dssp EEEEEETTTEEEEEECCGGGCC-HHHHHHHHHHHSCTTTTTCCCG---GGTCCC-CCSSCGGGSCCHHHHHHHT
T ss_pred eEEEEccCCeEEEEEecCchHH-HHHHHHHHHHHhcCCcccccee---eeeccc-cccCCCceecCHHHHHHHc
Confidence 47799 99999987665 8999999999999999988899 999999 7889999999999999997
No 3
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=99.76 E-value=3.2e-19 Score=166.98 Aligned_cols=112 Identities=14% Similarity=0.205 Sum_probs=89.4
Q ss_pred EeecceEEecCCC---CceeEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccCC---------CCCce--EEEecc
Q psy8646 70 GFAREVTYLCPYS---GPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLNT---------RSNDI--WFWLHK 133 (191)
Q Consensus 70 ~~a~~V~ylcp~~---G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kigg---------rg~D~--lrFa~k 133 (191)
.++++|+++.+++ +++.|+|+||||||+|.+... + .++|||+.|++ |.+. +|+|| ++|+|+
T Consensus 7 ~~v~~V~l~~~~~~~~~~~~GtL~lTn~~LiF~~~~~-~--e~wi~~~~I~~VeK~~~~~~~~~l~I~CKDfr~~~f~f~ 83 (512)
T 2yf0_A 7 TKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQ-K--ETWILHHHIASVEKLALTTSGCPLVIQCKNFRTVHFIVP 83 (512)
T ss_dssp EEEEECCCC--------CCEEEEEECSSEEEEEESSS-C--EEEEEGGGEEEEEECCCBTTBEEEEEEETTSCEEEEEES
T ss_pred CccccEEEEeccCCCCCceeEEEEEECCEEEEeCCCC-C--ceEecccceeEEEEecCCCCCceEEEEecCCcEEEEEeC
Confidence 4678999887654 799999999999999998433 2 47889999999 6532 78899 999998
Q ss_pred cCCchhhHHHHHHHhhccccCCCccccccccceeeccCcc---CCCCcEeechHHHHHhc
Q psy8646 134 LKKSLEDEMLFDEVQQYAFPVSHKLCRIVSSIIEYTDNYF---RKMGWNIMNQYAELREN 190 (191)
Q Consensus 134 ~~~~~~~~~vfe~L~~~afPls~~~~LF~~~AF~Y~~n~~---~~nGW~IYdp~~Ey~Rq 190 (191)
.+. ++++||+.|.++++|.+.. .|| ||.|+|... .++||++|||.+||+||
T Consensus 84 ~~~--~~~~v~~sL~~~~~p~~~~-~lf---aF~y~~~~~~~~~~~gw~~yd~~~E~~R~ 137 (512)
T 2yf0_A 84 RER--DCHDIYNSLLQLSKQAKYE-DLY---AFSYNPKQNDSERLQGWQLIDLAEEYKRM 137 (512)
T ss_dssp CHH--HHHHHHHHHHHHSCCCCST-TSG---GGTCCCSCCSHHHHHHHTTCCHHHHHHHT
T ss_pred ChH--HHHHHHHHHHhhcCCCCcc-eeE---EEeccccccccccCCCccccCHHHHHHHc
Confidence 753 3899999999999997765 599 999998332 25999999999999998
No 4
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=98.22 E-value=5e-06 Score=66.30 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=61.5
Q ss_pred CCCCCCCCCCCCCceeEEeecceE-EecC--CCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee-cc--CC----
Q psy8646 53 QTSRPDDLPLLPGEIIQGFAREVT-YLCP--YSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI-KL--NT---- 122 (191)
Q Consensus 53 ~~~~~~~~~LLPGE~i~~~a~~V~-ylcp--~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr-Ki--gg---- 122 (191)
..+...++-|+|||.|+...++|. |... ..+.-.|+|+||||||+|..........+.+||..|.. .+ +.
T Consensus 16 ~~t~s~rp~L~~~E~il~~~d~V~Ly~g~~k~~~~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~fg~s 95 (145)
T 2cay_A 16 ETTSSGQPLLREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLTRS 95 (145)
T ss_dssp CBCTTSCBCCCTTCCEEEEEEEEEEEETTEECTTCSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSSSSS
T ss_pred hhccCCCcccCCCCEEEEEcCCcceecCCCCCcCCCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCccccC
Confidence 344557788999999999888884 4432 24677899999999999976544222689999988877 21 11
Q ss_pred -----------CCCceEEEecccCCch
Q psy8646 123 -----------RSNDIWFWLHKLKKSL 138 (191)
Q Consensus 123 -----------rg~D~lrFa~k~~~~~ 138 (191)
.+...++++|+..+..
T Consensus 96 ~Ki~l~~~p~~~~~~~~KLsFk~GGa~ 122 (145)
T 2cay_A 96 PRLILFFKDPSSSTEFVQLSFRKSDGV 122 (145)
T ss_dssp CEEEEEESSCSSTTCCEEEEESSSCCH
T ss_pred ceEEEEecCCCCCceEEEEEEcCCCch
Confidence 2335699999987643
No 5
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=98.13 E-value=2.2e-05 Score=61.98 Aligned_cols=60 Identities=17% Similarity=0.103 Sum_probs=46.5
Q ss_pred CCCCCCCCceeEEeecceE-EecCC-CCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee
Q psy8646 58 DDLPLLPGEIIQGFAREVT-YLCPY-SGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI 118 (191)
Q Consensus 58 ~~~~LLPGE~i~~~a~~V~-ylcp~-~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr 118 (191)
.++-|.|||.++...++|. |-... .+.-.|+|+||+|||+|..... ....+.+||..|..
T Consensus 9 ~~p~L~~~E~il~~~~~V~Ly~g~~k~~~k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~ 70 (140)
T 2hth_B 9 TSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVF 70 (140)
T ss_dssp CCSCCCTTCCEEEEEEEEEEEETTCSSCCCCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEE
T ss_pred CCCccCCCceEEEEcCCEEEecCCCCCCCcCCEEEEecCEEEEecCCC-CceEEEEEhHHeee
Confidence 3456899999999888884 44322 2568899999999999976654 55789999988766
No 6
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=95.95 E-value=0.0012 Score=62.66 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCceeEEeecceEEecCCCC------ceeEEEEEEeeEEEEeecCCCCceEEeecceeeee
Q psy8646 54 TSRPDDLPLLPGEIIQGFAREVTYLCPYSG------PARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI 118 (191)
Q Consensus 54 ~~~~~~~~LLPGE~i~~~a~~V~ylcp~~G------~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr 118 (191)
+....++.|+|+|+++..-.+|.. |.| .-.|+||||+|||+|...+..+...+.|||..|.+
T Consensus 9 ~t~s~rp~L~~~E~~l~vqd~VgL---Y~Gk~Ki~~~q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~ 76 (566)
T 1w7p_D 9 TTSSGQPLLREGEKDIFIDQSVGL---YHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAY 76 (566)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccccCCcccCCCceEEEeeccccc---ccCCcCCccccCceEEEEeeeEEEecCCCCcceEEEEEhHHcce
Confidence 344577889999999888777743 334 45699999999999955444344789999988887
No 7
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=95.38 E-value=0.064 Score=41.95 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=54.9
Q ss_pred CCCCCCceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecC---CCCceEEeecceeeee-cc---CC----------
Q psy8646 60 LPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSID---RETPYVVEVPLGVVSI-KL---NT---------- 122 (191)
Q Consensus 60 ~~LLPGE~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d---~~~~~~l~vPLg~Isr-Ki---gg---------- 122 (191)
.-|+|||.|+.. | ..++..+.+||.||++.-.. ..+.....+|+.-|+. .+ |.
T Consensus 26 ~~L~~gE~I~~a-----y-----k~iRD~~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~fDlDaElki~ 95 (126)
T 3hsa_A 26 PILGDNEELQLA-----Y-----XMVRDLFVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTFDMDAELXLW 95 (126)
T ss_dssp GGSCTTCCEEEE-----E-----ECSSEEEEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTTSCEEEEEEE
T ss_pred HhcCCCCEEEEE-----e-----hhcCceEEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccccCCceEEEE
Confidence 458999999654 3 34589999999999997644 3455679999988888 43 21
Q ss_pred -CCCce-EEEecccCCchhhHHHHHHHhhcc
Q psy8646 123 -RSNDI-WFWLHKLKKSLEDEMLFDEVQQYA 151 (191)
Q Consensus 123 -rg~D~-lrFa~k~~~~~~~~~vfe~L~~~a 151 (191)
.|.+. +.+-|+... .-++++..|.++.
T Consensus 96 isg~~~pi~~~f~k~~--di~~i~k~La~~v 124 (126)
T 3hsa_A 96 ISGQHEPLVXELXRGT--DVVGIQXTIARYA 124 (126)
T ss_dssp ETTCSSCEEEEECTTS--CHHHHHHHHHHHH
T ss_pred EcCCceEEEEeccCcc--cHHHHHHHHHHHh
Confidence 22333 455555432 2688888887764
No 8
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=91.89 E-value=0.2 Score=40.88 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=30.1
Q ss_pred CCC--ceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecce
Q psy8646 63 LPG--EIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLG 114 (191)
Q Consensus 63 LPG--E~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg 114 (191)
-|+ |.|.....+|..+.--...-.|+|+||+=||++.+. .. ..+.||.-
T Consensus 18 ~p~~~E~v~~~~~~v~~vl~~~~~g~GtLyVt~~~l~W~~~-~~--~G~sI~Yp 68 (171)
T 1zyi_A 18 PPGSAEGLRQQQPETEAVLNGKGLGTGTLYIAESRLSWLDG-SG--LGFSLEYP 68 (171)
T ss_dssp ---------CBCSSEEEEBTTBCCCEEEEEEETTEEEEEET-TT--EEEEESSC
T ss_pred CCCCccceEEEcCCEEEEECCCccCceEEEEEcCEEEEEcC-CC--cEEEeecC
Confidence 577 888888888876654444457999999999999876 33 34555553
No 9
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=83.99 E-value=1.9 Score=35.95 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=52.0
Q ss_pred CCCCC--CceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecC---CCCceEEeecce--eeee-cc--CCCCC-ce-
Q psy8646 60 LPLLP--GEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSID---RETPYVVEVPLG--VVSI-KL--NTRSN-DI- 127 (191)
Q Consensus 60 ~~LLP--GE~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d---~~~~~~l~vPLg--~Isr-Ki--ggrg~-D~- 127 (191)
.-|+| ||.|... | ..++-.+.+||.||++.-.. ..+.....+|+. -|+. .+ .|..+ |-
T Consensus 20 ~~Ll~EdgE~I~~a-----y-----k~irD~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtfDlDaE 89 (193)
T 3b77_A 20 DYVLHEDGEKIYFL-----I-----KSKTDEYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTVDLDVE 89 (193)
T ss_dssp GGSCGGGTCCEEEE-----E-----ECSSEEEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSSCCEEE
T ss_pred hhccCCCCCEEeee-----e-----eecceEEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEecceeccCcc
Confidence 35889 9999654 3 34478999999999997644 245668999999 8888 44 23222 21
Q ss_pred EEEe-------cccCC--chhhHHHHHHHhhccc
Q psy8646 128 WFWL-------HKLKK--SLEDEMLFDEVQQYAF 152 (191)
Q Consensus 128 lrFa-------~k~~~--~~~~~~vfe~L~~~af 152 (191)
+.|- ++... ...-+++|..|...+.
T Consensus 90 lki~i~~~~~~Ief~K~~~~di~~lyk~L~~is~ 123 (193)
T 3b77_A 90 IKFEIGGKHYSIDVDKKQLEHVKDLYKALLAIAE 123 (193)
T ss_dssp EEEEETTEEEEEEEEGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCceEEEEeCCcchhhHHHHHHHHHHHHH
Confidence 2221 22211 1136778888877554
No 10
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=38.21 E-value=70 Score=24.04 Aligned_cols=81 Identities=11% Similarity=0.112 Sum_probs=50.7
Q ss_pred CCceeEEeecceEEecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee-ccC--CCCCce----------EEE
Q psy8646 64 PGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI-KLN--TRSNDI----------WFW 130 (191)
Q Consensus 64 PGE~i~~~a~~V~ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr-Kig--grg~D~----------lrF 130 (191)
..|+++.....|-| -...|+|+|+.=|+...+..+ .++.+.+++.-|-. ++. |+.+=+ .-|
T Consensus 4 ~~~~~ll~v~~v~y-----KK~dGtL~l~~d~i~W~p~~~-~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F 77 (108)
T 1pfj_A 4 SSEEVLLIVKKVRQ-----KKQDGALYLMAERIAWAPEGK-DRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNF 77 (108)
T ss_dssp SSCCEEEEESCCBC-----SSCBCEEEEETTEEEEECSSS-SSCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEE
T ss_pred cchheeEEehhhee-----ecCCceEEEEcceEEEccCCC-CCceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEE
Confidence 34677788888877 344599999999999988555 45667777766666 553 222211 344
Q ss_pred ecccCC--chhhHHHHHHHhhc
Q psy8646 131 LHKLKK--SLEDEMLFDEVQQY 150 (191)
Q Consensus 131 a~k~~~--~~~~~~vfe~L~~~ 150 (191)
.|.... ..+|..|=|.|++.
T Consensus 78 ~Ftn~~~a~~erd~VKd~L~~~ 99 (108)
T 1pfj_A 78 HFSNESTAVKERDAVKDLLQQL 99 (108)
T ss_dssp ECCCSSCTTHHHHHHHHHHHHH
T ss_pred EEcCcHHHHHHHHHHHHHHHHH
Confidence 444322 23466666666654
No 11
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=31.58 E-value=58 Score=24.73 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=33.8
Q ss_pred EecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee---ccCCC
Q psy8646 77 YLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI---KLNTR 123 (191)
Q Consensus 77 ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr---Kiggr 123 (191)
.|.| .++ +.|.|+|--+.|...-...+..+.||++.|.- |-+|+
T Consensus 53 NIsp--~Av-~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArEnG~ 99 (111)
T 1ou8_A 53 NLSA--SAT-GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARENGD 99 (111)
T ss_dssp ECST--TTC-EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTTCC
T ss_pred ECCh--hhh-cCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeeccCC
Confidence 3555 344 89999999999988777788899999977766 65543
No 12
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A
Probab=30.42 E-value=1.2e+02 Score=24.24 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=36.8
Q ss_pred eEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccC-------C-CCC---ceEEEecccCCchhhHHHHHHHhhc
Q psy8646 86 RGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLN-------T-RSN---DIWFWLHKLKKSLEDEMLFDEVQQY 150 (191)
Q Consensus 86 ~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kig-------g-rg~---D~lrFa~k~~~~~~~~~vfe~L~~~ 150 (191)
.|+|.||+-.|+|.....+ . +.-||..|-| ... | ||. =+..|.... ..+||+.|+..
T Consensus 35 ~~~L~lt~~~L~L~~~~~~--~-~~WPy~~LRRYG~d~~~FsFEaGRRC~tGeGiF~F~t~~-----~e~If~~l~~~ 104 (153)
T 2kuq_A 35 SGVMELTQSELVLHLHRRE--A-VRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSR-----AEEIFNLLQDL 104 (153)
T ss_dssp EEEEEECSSCEEEECSSSC--C-EEECGGGEEEEEEETTEEEEEECTTSTTCSEEEEEECTT-----HHHHHHHHHHH
T ss_pred eEEEEEcCCEEEEEeCCCC--c-eEccHHHhhhcCccCCEEEEECCCCCCCCCcEEEEEcCC-----HHHHHHHHHHH
Confidence 6899999999999755443 2 4669988877 332 2 333 334444332 57888888764
No 13
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=30.15 E-value=1.7e+02 Score=21.62 Aligned_cols=54 Identities=20% Similarity=0.372 Sum_probs=37.0
Q ss_pred CCceeEEeecceEEecCCCCceeEEEEEEee---EEEEeecCC-CCceEEeecceeee
Q psy8646 64 PGEIIQGFAREVTYLCPYSGPARGILSVTNY---KLYFRSIDR-ETPYVVEVPLGVVS 117 (191)
Q Consensus 64 PGE~i~~~a~~V~ylcp~~G~v~G~L~iTNY---rL~F~s~d~-~~~~~l~vPLg~Is 117 (191)
||+..+.=...+.+-+||...+...|.|||= ++-|+-... .+.+-+.=+.|+|.
T Consensus 6 ~~~l~i~P~~~l~F~~p~~~~~~~~l~l~N~s~~~vaFKVKTT~p~~y~VrP~~Gii~ 63 (126)
T 1msp_A 6 PGDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLD 63 (126)
T ss_dssp CCCEEEESSSCEEEESCCSSCCCEEEEEEECSSSCEEEEEEESCTTTEEEESCEEEEC
T ss_pred CCeEEEcCCCeEEEcCcCCcceEEEEEEECCCCCeEEEEEEcCCCCcEEEECCCeEEC
Confidence 4443333344666778999889999999984 777765432 34577777777776
No 14
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2
Probab=28.44 E-value=1.3e+02 Score=23.19 Aligned_cols=59 Identities=20% Similarity=0.242 Sum_probs=38.1
Q ss_pred eeEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccCC--------CCC---ceEEEecccCCchhhHHHHHHHhhcc
Q psy8646 85 ARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLNT--------RSN---DIWFWLHKLKKSLEDEMLFDEVQQYA 151 (191)
Q Consensus 85 v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kigg--------rg~---D~lrFa~k~~~~~~~~~vfe~L~~~a 151 (191)
-.|.|.||+-.|+|..... + .+.-||..+-| ...+ ||. =+..|.... ..+||+.|+..+
T Consensus 27 g~~~L~lt~~~L~L~~~~~--~-~~~Wp~~~LRrYG~d~~~FsFEaGRRC~tGeGiF~F~t~~-----~~~If~~l~~~i 98 (129)
T 1xr0_B 27 GSGIMELTDTELILYTRKR--D-SVKWHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCAR-----AEELFNMLQEIM 98 (129)
T ss_dssp CCEEEEECSSCEEEEETTT--E-EEEECSTTEEEEEECSSEEEEEECSCSTTCSEEEEEECSC-----HHHHHHHHHHHH
T ss_pred eeEEEEEecCEEEEEeCCC--C-eeEcchHHhhhcCccCCEEEEEcCCCCCCCCcEEEEEcCC-----HHHHHHHHHHHH
Confidence 3599999999999974333 2 46889987777 3322 333 334444332 578888887643
No 15
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=26.70 E-value=76 Score=24.71 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=33.9
Q ss_pred EecCCCCceeEEEEEEeeEEEEeecCCCCceEEeecceeeee---ccCCC
Q psy8646 77 YLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI---KLNTR 123 (191)
Q Consensus 77 ylcp~~G~v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr---Kiggr 123 (191)
.|+| .++ +.|.|+|--+.|...-...+..+.||++.|.- |-+|+
T Consensus 53 NIsp--~Av-~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyArEnG~ 99 (129)
T 1ou9_A 53 NLSA--SAT-GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARENGD 99 (129)
T ss_dssp ECCT--TTC-EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTTCC
T ss_pred ECCh--hhh-cCeEEeccEEEEEEEECCEeEEEEEehHheeEeeecccCc
Confidence 3555 344 89999999999988777788899999977766 66543
No 16
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=26.48 E-value=71 Score=24.49 Aligned_cols=38 Identities=29% Similarity=0.315 Sum_probs=31.1
Q ss_pred eEEEEEEeeEEEEeecCCCCceEEeecceeeee---ccCCC
Q psy8646 86 RGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI---KLNTR 123 (191)
Q Consensus 86 ~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr---Kiggr 123 (191)
.+.|.|+|--+.|...-...+..+.||++.|.- |-+|+
T Consensus 60 v~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyArEnG~ 100 (118)
T 1yfn_A 60 VGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGA 100 (118)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTTCC
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeeecCC
Confidence 489999999999988777778899999977766 65543
No 17
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=24.48 E-value=50 Score=30.15 Aligned_cols=27 Identities=33% Similarity=0.513 Sum_probs=21.8
Q ss_pred EEecCCCCceeEEEEEEeeEEEEeecCC
Q psy8646 76 TYLCPYSGPARGILSVTNYKLYFRSIDR 103 (191)
Q Consensus 76 ~ylcp~~G~v~G~L~iTNYrL~F~s~d~ 103 (191)
..|.|. +.+.|+|.||+-+|||...+.
T Consensus 10 ~~i~p~-~~~~G~l~it~~~iyF~~~~~ 36 (414)
T 1t77_A 10 QLVAPS-VVVKGTLSVTSSELYFEVDEE 36 (414)
T ss_dssp EEECSS-CEEEEEEEECSSEEEEEECTT
T ss_pred EEEeee-cceeeEEEEeCCEEEEEeCCC
Confidence 355674 788999999999999987543
No 18
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=23.59 E-value=96 Score=23.15 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=23.0
Q ss_pred CCCCCcee--EEee------cceEEecCCCC---ceeEEEEEE
Q psy8646 61 PLLPGEII--QGFA------REVTYLCPYSG---PARGILSVT 92 (191)
Q Consensus 61 ~LLPGE~i--~~~a------~~V~ylcp~~G---~v~G~L~iT 92 (191)
.|-|||+- ...+ -...|.|.+-| .-+|+|+|+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchHcCEEEEEEe
Confidence 36699884 4433 36789998766 478999986
No 19
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=23.37 E-value=1.5e+02 Score=23.35 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=36.6
Q ss_pred eeEEEEEEeeEEEEeecCCCCceEEeecceeeee--ccC-------C-CCC---ceEEEecccCCchhhHHHHHHHhhcc
Q psy8646 85 ARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLN-------T-RSN---DIWFWLHKLKKSLEDEMLFDEVQQYA 151 (191)
Q Consensus 85 v~G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kig-------g-rg~---D~lrFa~k~~~~~~~~~vfe~L~~~a 151 (191)
-.|.|.||+..|+|...... .+.-||..|-| ... | ||. =+..|.... ..+||+.|+..+
T Consensus 34 G~~~L~Lt~~~L~L~~~~~~---~~~WPy~~LRRYG~d~~~FsFEaGRrC~tGeGiF~F~t~~-----~e~If~~l~~~i 105 (146)
T 2kup_A 34 GSGVMELTQSELVLHLHRRE---AVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSR-----AEEIFNLLQDLM 105 (146)
T ss_dssp EEEEEEECSSCEEEECSSSC---CEEECGGGCSCEEEETTEEEEEECTTSSSCSEEEEEECTT-----HHHHHHHHHHHH
T ss_pred eeEEEEEccCEEEEEcCCCC---eeEcCHHHhhhcCccCCEEEEEcCCCCCCCCCEEEEEcCC-----HHHHHHHHHHHH
Confidence 35999999999999754432 34559887777 322 2 332 233333322 578888887654
No 20
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=22.15 E-value=2.3e+02 Score=20.66 Aligned_cols=62 Identities=11% Similarity=0.208 Sum_probs=39.7
Q ss_pred EEEEEEeeEEEEeecCCCCceEEeecceeeee--ccC-------C-CCCce-EEEecccCCchhhHHHHHHHhhcc
Q psy8646 87 GILSVTNYKLYFRSIDRETPYVVEVPLGVVSI--KLN-------T-RSNDI-WFWLHKLKKSLEDEMLFDEVQQYA 151 (191)
Q Consensus 87 G~L~iTNYrL~F~s~d~~~~~~l~vPLg~Isr--Kig-------g-rg~D~-lrFa~k~~~~~~~~~vfe~L~~~a 151 (191)
+.|.||+-.|.+..........+.-||..|-| ..+ | ||..= =.|.|+-. +..+||+.|...+
T Consensus 23 ~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~~~FsFEaGRrC~tG~G~f~F~~~---~~~~If~~v~~ai 95 (103)
T 1j0w_A 23 CALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTR---DGEAIYQKVHSAA 95 (103)
T ss_dssp EEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECSSEEEEEECSSSSSCSEEEEEECS---CHHHHHHHHHHHH
T ss_pred EEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCccCCEEEEEeCCCCCCCCcEEEEEcC---CHHHHHHHHHHHH
Confidence 69999999999976665434578889988877 332 2 33321 22333332 1578999887643
No 21
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=22.01 E-value=93 Score=23.21 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=22.9
Q ss_pred CCCCCceeE--Eee------cceEEecCCCC---ceeEEEEEE
Q psy8646 61 PLLPGEIIQ--GFA------REVTYLCPYSG---PARGILSVT 92 (191)
Q Consensus 61 ~LLPGE~i~--~~a------~~V~ylcp~~G---~v~G~L~iT 92 (191)
.|-|||+-. ..+ .+..|.|.+-| .-+|+|+|+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 367998744 333 24889998877 468999885
No 22
>1v54_I STA, cytochrome C oxidase polypeptide VIC; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.3.1 PDB: 1oco_I* 1occ_I* 1ocz_I* 1ocr_I* 1v55_I* 2dyr_I* 2dys_I* 2eij_I* 2eik_I* 2eil_I* 2eim_I* 2ein_I* 2occ_I* 2ybb_T* 2zxw_I* 3abk_I* 3abl_I* 3abm_I* 3ag1_I* 3ag2_I* ...
Probab=21.97 E-value=28 Score=24.58 Aligned_cols=11 Identities=9% Similarity=0.163 Sum_probs=9.6
Q ss_pred eechHHHHHhc
Q psy8646 180 IMNQYAELREN 190 (191)
Q Consensus 180 IYdp~~Ey~Rq 190 (191)
=|||.++|+||
T Consensus 53 nYD~~k~ferM 63 (73)
T 1v54_I 53 NYDSMKDFEEM 63 (73)
T ss_dssp TCCHHHHHHHH
T ss_pred hcCcHHHHHHH
Confidence 39999999986
Done!