Query psy8647
Match_columns 274
No_of_seqs 173 out of 1382
Neff 7.6
Searched_HMMs 46136
Date Sat Aug 17 00:10:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8647.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8647hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223|consensus 100.0 3.5E-51 7.6E-56 357.0 22.1 223 39-264 3-229 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 3.4E-48 7.4E-53 349.6 23.9 218 44-264 51-276 (296)
3 PTZ00016 aquaglyceroporin; Pro 100.0 1.6E-47 3.5E-52 346.0 23.5 236 28-263 30-292 (294)
4 PF00230 MIP: Major intrinsic 100.0 1.4E-47 3E-52 335.8 16.8 217 40-256 1-227 (227)
5 PLN00026 aquaporin NIP; Provi 100.0 3.1E-46 6.6E-51 336.3 23.9 221 44-268 68-289 (298)
6 COG0580 GlpF Glycerol uptake f 100.0 3.1E-46 6.8E-51 325.1 19.7 215 45-261 3-240 (241)
7 PLN00182 putative aquaporin NI 100.0 1.9E-45 4.2E-50 329.8 25.2 215 44-261 39-254 (283)
8 PLN00166 aquaporin TIP2; Provi 100.0 1.4E-45 3E-50 326.5 23.8 219 42-262 13-238 (250)
9 PLN00027 aquaporin TIP; Provis 100.0 1.8E-45 3.9E-50 326.6 24.0 217 44-262 17-240 (252)
10 KOG0224|consensus 100.0 3.2E-47 6.9E-52 334.8 12.4 226 40-265 25-279 (316)
11 PLN00167 aquaporin TIP5; Provi 100.0 3.4E-45 7.4E-50 324.8 24.8 218 43-262 18-241 (256)
12 PRK05420 aquaporin Z; Provisio 100.0 2E-45 4.4E-50 322.4 23.0 214 47-263 2-230 (231)
13 PLN00183 putative aquaporin NI 100.0 2.1E-43 4.5E-48 315.6 23.8 226 34-263 32-258 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.7E-42 5.8E-47 302.8 19.5 212 48-259 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 3.6E-40 7.9E-45 287.0 19.9 205 52-256 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 1.9E-15 4E-20 136.1 10.9 99 45-148 157-255 (283)
17 cd00333 MIP Major intrinsic pr 99.6 5.6E-15 1.2E-19 129.7 10.8 99 44-144 127-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.6 3.8E-15 8.3E-20 134.7 8.8 108 155-262 61-173 (298)
19 PLN00183 putative aquaporin NI 99.6 7.2E-15 1.6E-19 131.8 10.5 102 45-151 159-260 (274)
20 PLN00184 aquaporin NIP1; Provi 99.6 4E-15 8.7E-20 134.8 8.4 102 161-262 50-156 (296)
21 TIGR00861 MIP MIP family chann 99.5 3.7E-14 8.1E-19 123.5 9.9 96 44-141 119-215 (216)
22 KOG0223|consensus 99.5 4E-14 8.6E-19 124.1 7.4 107 37-149 121-228 (238)
23 PLN00167 aquaporin TIP5; Provi 99.4 2.3E-13 5E-18 121.2 8.4 102 161-262 18-129 (256)
24 PTZ00016 aquaglyceroporin; Pro 99.4 4.7E-13 1E-17 121.5 6.9 100 163-262 48-152 (294)
25 PLN00166 aquaporin TIP2; Provi 99.3 7.7E-12 1.7E-16 111.1 11.2 104 44-150 137-240 (250)
26 PRK05420 aquaporin Z; Provisio 99.3 1.1E-11 2.4E-16 109.0 11.2 101 44-149 129-230 (231)
27 PLN00027 aquaporin TIP; Provis 99.3 1.2E-11 2.6E-16 110.1 11.2 102 44-148 139-240 (252)
28 KOG0224|consensus 99.3 2.7E-12 5.9E-17 114.1 5.7 102 163-264 30-137 (316)
29 COG0580 GlpF Glycerol uptake f 99.3 1.2E-11 2.6E-16 108.4 7.4 106 163-268 3-116 (241)
30 PF00230 MIP: Major intrinsic 99.2 1.7E-10 3.7E-15 101.0 10.5 96 44-142 132-227 (227)
31 COG2116 FocA Formate/nitrite f 94.5 2 4.3E-05 38.6 14.5 182 78-266 63-263 (265)
32 PRK11562 nitrite transporter N 90.4 3.5 7.6E-05 37.2 10.5 178 81-268 60-257 (268)
33 PRK09713 focB putative formate 88.2 20 0.00042 32.6 13.7 102 81-186 69-182 (282)
34 PRK10805 formate transporter; 85.5 28 0.00061 31.6 14.5 101 81-185 70-182 (285)
35 PF04632 FUSC: Fusaric acid re 50.6 2.7E+02 0.0059 27.8 13.3 137 93-264 355-494 (650)
36 PF03033 Glyco_transf_28: Glyc 40.6 9.5 0.0002 29.7 0.1 18 101-118 8-25 (139)
37 PF01226 Form_Nir_trans: Forma 35.1 98 0.0021 27.5 5.7 106 80-187 58-173 (250)
38 PRK15120 lipopolysaccharide AB 34.9 1.5E+02 0.0033 27.4 7.3 60 51-110 270-330 (366)
39 PRK11427 multidrug efflux syst 30.2 6.3E+02 0.014 26.1 12.7 29 120-148 394-422 (683)
40 COG0306 PitA Phosphate/sulphat 29.4 4.7E+02 0.01 24.3 11.3 138 102-262 20-160 (326)
41 smart00831 Cation_ATPase_N Cat 26.4 60 0.0013 21.8 2.3 37 31-67 18-57 (64)
42 PRK12446 undecaprenyldiphospho 23.4 21 0.00046 33.1 -0.7 20 98-117 8-27 (352)
43 TIGR00790 fnt formate/nitrite 22.5 5.3E+02 0.011 22.6 14.0 78 106-185 68-158 (239)
44 PRK14217 camphor resistance pr 21.6 2.1E+02 0.0045 22.9 4.8 109 132-259 10-122 (134)
45 PF14990 DUF4516: Domain of un 21.1 2.3E+02 0.0049 18.6 3.9 35 117-151 3-37 (47)
46 PRK14218 camphor resistance pr 21.0 2.6E+02 0.0057 22.3 5.3 109 132-259 14-126 (133)
No 1
>KOG0223|consensus
Probab=100.00 E-value=3.5e-51 Score=357.02 Aligned_cols=223 Identities=44% Similarity=0.763 Sum_probs=203.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhc
Q psy8647 39 HDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSG 117 (274)
Q Consensus 39 ~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g 117 (274)
.+.++++.+|++++||++|++++|.+|++.....+ ....+.+.+++++|+.+++.+++++++||||+|||||+++++.|
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~ 82 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGG 82 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhC
Confidence 35566889999999999999999999999875432 33335678999999999999999999999999999999999999
Q ss_pred CCCccchhhhHhHHhHHHHHHHHHHHHhcCCCC--CCcccccCCCCCChhHHHHHHHHHHHHHHHHhhh-eecCCCCCCC
Q psy8647 118 HISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPC--CKLGMTGLNPSINATQGLIIEAIITFVLVLTVEA-VCDDRRTDIK 194 (274)
Q Consensus 118 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~-~~~~~~~~~~ 194 (274)
++++.++..|+++|++|+++|+.+.+.+.+.+. .+.+.+.+.++.+..|+++.|++.||.|++++++ .+|+|+.
T Consensus 83 ~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~--- 159 (238)
T KOG0223|consen 83 KISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS--- 159 (238)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---
Confidence 999999999999999999999999999999852 2566777888999999999999999999999999 6777665
Q ss_pred CchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCC
Q psy8647 195 GSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMP 264 (274)
Q Consensus 195 ~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~ 264 (274)
.+.|+.||+.+.+.+++++++||++|||||+|||++..+.|+++|+||+||++|+++++++|++++.+.+
T Consensus 160 ~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~ 229 (238)
T KOG0223|consen 160 ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDE 229 (238)
T ss_pred ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCcc
Confidence 6899999999999999999999999999999999999999999999999999999999999999998763
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=3.4e-48 Score=349.61 Aligned_cols=218 Identities=31% Similarity=0.487 Sum_probs=188.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCcc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLL 122 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~ 122 (274)
.+++|++++||+|||+|+|++++++..... ....+...+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 51 ~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~ 130 (296)
T PLN00184 51 VPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLK 130 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHH
Confidence 568899999999999999999988753221 1223566789999999999999999999999999999999999999999
Q ss_pred chhhhHhHHhHHHHHHHHHHHHhcCCCCC----C---cccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCC
Q psy8647 123 KGFFYIIMQCVGAVAGSAVLEAVTPNPCC----K---LGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKG 195 (274)
Q Consensus 123 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~ 195 (274)
+.+.|+++|++|+++|+++++.+++.... . ...+.| ..+..++++.|+++|++|+++++.+.++++. .+.
T Consensus 131 ~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p--~~s~~~af~~E~i~TfvLv~~il~~~~~~~~-~~~ 207 (296)
T PLN00184 131 QVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSP--VGSDLQAFVMEFIVTFYLMFIISGVATDNRA-IGE 207 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCc--CCcHHHHHHHHHHHHHHHHHHHHheeccCcC-CCc
Confidence 99999999999999999999999864321 1 112233 3578999999999999999999988654432 345
Q ss_pred chhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCC
Q psy8647 196 SVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMP 264 (274)
Q Consensus 196 ~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~ 264 (274)
..|+.||+.+.+.++..+++||++|||||||||+++.+.|+++||||+||++|+++|+++|++++..+.
T Consensus 208 ~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~ 276 (296)
T PLN00184 208 LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDK 276 (296)
T ss_pred chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999986443
No 3
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.6e-47 Score=345.95 Aligned_cols=236 Identities=27% Similarity=0.360 Sum_probs=198.1
Q ss_pred cccccccccCcCCCcc-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC-CCCchHHHHHHHHHHHHHHHhhcccCCccc
Q psy8647 28 DSIRMRGVIGIHDVRD-KNIWRALIAELIGTFVLVFVGTGSIMWPNDPN-TVDVTKIALTFGFVIATIAQAIGHVSGCHI 105 (274)
Q Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~ 105 (274)
+.++..+..+..|.++ ++++|++++||+|||+|+|+++++........ ..+...+++++|+++.+.+++++++||+|+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~ 109 (294)
T PTZ00016 30 AQKRPPGGQNFWAPREYRPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHL 109 (294)
T ss_pred cccCCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCcc
Confidence 3455555566666666 78999999999999999999998876432111 234667899999999999999999999999
Q ss_pred chHHHHHHHHhcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCC---------------CcccccCCCCCChhHHHHH
Q psy8647 106 NPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC---------------KLGMTGLNPSINATQGLII 170 (274)
Q Consensus 106 NPAvTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 170 (274)
|||||+++++.|+++|.+.+.|+++|++|+++|+++++.++++... ..+.....++.+..++++.
T Consensus 110 NPAVTla~~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~ 189 (294)
T PTZ00016 110 NPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFS 189 (294)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHH
Confidence 9999999999999999999999999999999999999998865211 0111122235678999999
Q ss_pred HHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhh------cCCC----ceee
Q psy8647 171 EAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIG------NHWD----NIWV 240 (274)
Q Consensus 171 E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~------~~~~----~~wv 240 (274)
|+++|++|+++++.++|+++....+..|+.||+.+.++.+..+++||++|||||||||+++. ..|+ |+||
T Consensus 190 E~i~T~iLv~~ila~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WV 269 (294)
T PTZ00016 190 ELILTAILLLVILAITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWV 269 (294)
T ss_pred HHHHHHHHHHHHHHhccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeee
Confidence 99999999999999998876544557899999999999999999999999999999999985 2454 6899
Q ss_pred hhhhhhHHHHHHHHHHHHHhccC
Q psy8647 241 YWAGPILGGVLAGAGCLCLCHSM 263 (274)
Q Consensus 241 y~v~p~~Ga~~a~~l~~~l~~~~ 263 (274)
||+||++|+++|+++|++++.++
T Consensus 270 y~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 270 PLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred eehHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998754
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.4e-47 Score=335.82 Aligned_cols=217 Identities=40% Similarity=0.698 Sum_probs=191.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCC-----CCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHH
Q psy8647 40 DVRDKNIWRALIAELIGTFVLVFVGTGSIMW--PNDPN-----TVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIG 112 (274)
Q Consensus 40 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~--~~~~~-----~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~ 112 (274)
|.++.+++|++++||+||++++|+++++... ....+ ..+...+++++|+++...++.++++||||+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 5677899999999999999999999886552 11111 1245688899999999999999999999999999999
Q ss_pred HHHhcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCC--CCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCC
Q psy8647 113 LFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNP--CCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRR 190 (274)
Q Consensus 113 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~ 190 (274)
.++.|++++++.+.|+++|++|+++|+.+++.++++. ....+.+.|.++.+..++++.|+++|++|+++++...++++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 9999999999999999999999999999999999884 22556667888999999999999999999999999988877
Q ss_pred CCC-CCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHH
Q psy8647 191 TDI-KGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGC 256 (274)
Q Consensus 191 ~~~-~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~ 256 (274)
... +...|+.||+.+.+..+..+++||+++||||+|+++++.+.|+++|+||++|++|+++|+++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 654 446899999999999999999999999999999999999999999999999999999999987
No 5
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=3.1e-46 Score=336.35 Aligned_cols=221 Identities=31% Similarity=0.446 Sum_probs=189.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCcc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLL 122 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~ 122 (274)
.+++|++++||+|||+|+|+++++...... ....+...+++++|+++++.+++++++||||+|||||+++++.++++|.
T Consensus 68 ~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~ 147 (298)
T PLN00026 68 VSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWK 147 (298)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHH
Confidence 568899999999999999999876442211 1123456678999999999999999999999999999999999999999
Q ss_pred chhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHH
Q psy8647 123 KGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVG 202 (274)
Q Consensus 123 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG 202 (274)
+.+.|+++|++|+++|+++++.++++.. ..+.+.| ..+..++++.|+++|++|+++++.+.++++. .+...++.+|
T Consensus 148 ~~~~YiiaQilGAi~aa~~~~~~~~~~~-~~g~t~p--~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~-~~~~~~l~iG 223 (298)
T PLN00026 148 HVPAYIAAQVSASICASFALKGVFHPFM-SGGVTVP--SVSTGQAFALEFIITFNLLFVVTAVATDTRA-VGELAGIAVG 223 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc-cCceeee--cccHHHHHHHHHHHHHHHHHhheeeecCCCC-cCCccchHHH
Confidence 9999999999999999999999987643 2233444 5688999999999999999999977544332 2346889999
Q ss_pred HHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCCCCCC
Q psy8647 203 LAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPSLQP 268 (274)
Q Consensus 203 ~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~~~~~ 268 (274)
+.+.+.++..+++||+++||||+|+|++..++|+++|+||+||++|+++++++|+++..+.++.++
T Consensus 224 l~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~ 289 (298)
T PLN00026 224 ATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDP 289 (298)
T ss_pred HHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccC
Confidence 999999999999999999999999999999999999999999999999999999998665444443
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-46 Score=325.08 Aligned_cols=215 Identities=34% Similarity=0.485 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCC
Q psy8647 45 NIWRALIAELIGTFVLVFVGTGSIMWPN----DPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHIS 120 (274)
Q Consensus 45 ~~~~~~~~EfigTf~lv~~~~~~~~~~~----~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~ 120 (274)
+..|++++||+||++|+++++++.+..+ ++...++..+++++|+++.+.+|+++++||+|+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 3467889999999999999999987532 234556778999999999999999999999999999999999999999
Q ss_pred ccchhhhHhHHhHHHHHHHHHHHHhcCCCCC----------CcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCC
Q psy8647 121 LLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC----------KLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRR 190 (274)
Q Consensus 121 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~ 190 (274)
|++.+.||++|++|+++|+.+++.++.+... +..++.|... +..++++.|+++|++|++.++.++++++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~-~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGY-SLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcc-cHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 9999999999999999999999999876332 3445666533 7899999999999999999999876555
Q ss_pred CCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc---------CCCceeehhhhhhHHHHHHHHHHHHHhc
Q psy8647 191 TDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN---------HWDNIWVYWAGPILGGVLAGAGCLCLCH 261 (274)
Q Consensus 191 ~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~---------~~~~~wvy~v~p~~Ga~~a~~l~~~l~~ 261 (274)
. ..+..|+.||+.+..+++..++.||.++|||||+||++.+. ++.|+|+||++|++|+++++++|+.++.
T Consensus 162 ~-~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 162 A-NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred c-cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 4 44599999999999999999999999999999999999632 3358999999999999999999998764
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.9e-45 Score=329.85 Aligned_cols=215 Identities=31% Similarity=0.484 Sum_probs=185.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCcc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLL 122 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~ 122 (274)
.+++|++++||+|||+|+|++++++..... ....+...+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~ 118 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHH
Confidence 467899999999999999999987664221 1122456778899999999999999999999999999999999999999
Q ss_pred chhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHH
Q psy8647 123 KGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVG 202 (274)
Q Consensus 123 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG 202 (274)
+.+.|+++|++|+++|+.+++.+++....+...+.| ..+..++++.|+++|++|++++++..++++. .+...++.+|
T Consensus 119 ~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p--~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~-~~~~~~l~iG 195 (283)
T PLN00182 119 QVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTP--TDSSGQALVAEIIISFLLMFVISGVATDSRA-VGELAGIAVG 195 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCC--CcchHHHHHHHHHHHHHHHHHHHhheecccc-CCcchhHHHH
Confidence 999999999999999999999998643222222333 4578899999999999999999987544332 2346899999
Q ss_pred HHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhc
Q psy8647 203 LAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCH 261 (274)
Q Consensus 203 ~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~ 261 (274)
+.+.+.++..+++||+++||||+|+++++.+.|+++|+||++|++|+++|+++|+++..
T Consensus 196 l~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 196 MTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999974
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.4e-45 Score=326.48 Aligned_cols=219 Identities=34% Similarity=0.647 Sum_probs=188.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhccCC-C--CC---CCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHH
Q psy8647 42 RDKNIWRALIAELIGTFVLVFVGTGSIMWP-N--DP---NTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFC 115 (274)
Q Consensus 42 ~~~~~~~~~~~EfigTf~lv~~~~~~~~~~-~--~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l 115 (274)
.+.+.+|++++||+|||+|+|+++++.... + +. +..+...+++++|+.+++.+++++++||+|+|||+|+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346778999999999999999999986531 1 11 12245678999999999999999999999999999999999
Q ss_pred hcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCC-CC
Q psy8647 116 SGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTD-IK 194 (274)
Q Consensus 116 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~-~~ 194 (274)
.|+++|.+.+.|+++|++|+++|+.+.+.+++++.. ......++.+..++++.|+++|++|+++++...++++.. .+
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~ 170 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESV--PTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLG 170 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC--cccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 999999999999999999999999999998865421 112233466889999999999999999999876544432 34
Q ss_pred CchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 195 GSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 195 ~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
...|+.||+.+...++..+++||+++||||+|+|++++++|+++|+||+||++|+++++++|+.++.+
T Consensus 171 ~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~ 238 (250)
T PLN00166 171 TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG 238 (250)
T ss_pred cchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcc
Confidence 57899999999999999999999999999999999999999999999999999999999999988653
No 9
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.8e-45 Score=326.61 Aligned_cols=217 Identities=36% Similarity=0.600 Sum_probs=187.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCC---CCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWP---NDPN---TVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSG 117 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~---~~~~---~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g 117 (274)
++.+|++++||+|||+|+|+++++.... .... ..+...+++++|+.+.+.+++++++||+|+|||+|+++++.|
T Consensus 17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g 96 (252)
T PLN00027 17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence 6779999999999999999999886421 1111 124557899999999999999999999999999999999999
Q ss_pred CCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhhee-cCCCCCCCCc
Q psy8647 118 HISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVC-DDRRTDIKGS 196 (274)
Q Consensus 118 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~-~~~~~~~~~~ 196 (274)
+++|.+.+.|+++|++|+++|+.+.+.+.++.. .+...+.++.+..++++.|+++|++|+++++... |+++...+..
T Consensus 97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~ 174 (252)
T PLN00027 97 NITLLRGILYWIAQLLGSVVACLLLKFSTGGLE--TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGII 174 (252)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccch
Confidence 999999999999999999999999998876542 2333344577899999999999999999999874 5443323457
Q ss_pred hhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 197 VPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 197 ~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
.|+.+|+.+..+++.++++||++|||||+|+|++++++|+++|+||+||++|+++++++|++++.+
T Consensus 175 ~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 175 APIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999999999999999864
No 10
>KOG0224|consensus
Probab=100.00 E-value=3.2e-47 Score=334.84 Aligned_cols=226 Identities=27% Similarity=0.385 Sum_probs=201.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhc
Q psy8647 40 DVRDKNIWRALIAELIGTFVLVFVGTGSIMWPND--PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSG 117 (274)
Q Consensus 40 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g 117 (274)
.-.++++.|.+++||+||++|+++++++++.... ....+...+.++||+++++.+++.+.+||||+|||||+++++.|
T Consensus 25 ~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g 104 (316)
T KOG0224|consen 25 LHIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILG 104 (316)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhc
Confidence 3334789999999999999999999999885432 34456778899999999999999999999999999999999999
Q ss_pred CCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCC----------------CcccccCCCCCChhHHHHHHHHHHHHHHHH
Q psy8647 118 HISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC----------------KLGMTGLNPSINATQGLIIEAIITFVLVLT 181 (274)
Q Consensus 118 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~ 181 (274)
|++|+|.++|+++|++||++|++.+|.++.+... +..++.|.++++..++|+.|+++|.+|+..
T Consensus 105 ~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 105 RLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999865332 345788999999999999999999999999
Q ss_pred hhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc-----------CCCceeehhhhhhHHHH
Q psy8647 182 VEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN-----------HWDNIWVYWAGPILGGV 250 (274)
Q Consensus 182 vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~-----------~~~~~wvy~v~p~~Ga~ 250 (274)
++.+.|++++-.+++.|+.+|+.+.++....+..+|..+||||||+||++.. ...+.|+.|++|++|++
T Consensus 185 l~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai 264 (316)
T KOG0224|consen 185 LFAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAI 264 (316)
T ss_pred eeEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhh
Confidence 9999999997788899999999999999999999999999999999999831 11578999999999999
Q ss_pred HHHHHHHHHhccCCC
Q psy8647 251 LAGAGCLCLCHSMPS 265 (274)
Q Consensus 251 ~a~~l~~~l~~~~~~ 265 (274)
+++++|++++.-+.+
T Consensus 265 ~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 265 LGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhheeeeeccCC
Confidence 999999999865443
No 11
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=3.4e-45 Score=324.84 Aligned_cols=218 Identities=34% Similarity=0.539 Sum_probs=189.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhccCCC----CC--CCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHh
Q psy8647 43 DKNIWRALIAELIGTFVLVFVGTGSIMWPN----DP--NTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCS 116 (274)
Q Consensus 43 ~~~~~~~~~~EfigTf~lv~~~~~~~~~~~----~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~ 116 (274)
+++++|++++||+|||+|+|+++++..... +. ...++..+++++|+++.+.+++++++||+|+|||||++.++.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 367899999999999999999998876421 11 123467899999999999999999999999999999999999
Q ss_pred cCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCc
Q psy8647 117 GHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGS 196 (274)
Q Consensus 117 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~ 196 (274)
|+++|++.+.|+++|++|+++|+.+++.++++.. .......++.+..++++.|+++|++|+++++..+|+++...+..
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~ 175 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVGQH--VPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAI 175 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccc--ccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Confidence 9999999999999999999999999998876532 11122233556788999999999999999999888766444457
Q ss_pred hhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 197 VPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 197 ~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
.|+.+|+.+....+..+++||+++||||+|+|+++.+.|+++|+||+||++|+++++++|++++.+
T Consensus 176 ~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~ 241 (256)
T PLN00167 176 GPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFP 241 (256)
T ss_pred chHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999999999999999999999999999999999999874
No 12
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=2e-45 Score=322.41 Aligned_cols=214 Identities=35% Similarity=0.621 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC--CCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccch
Q psy8647 47 WRALIAELIGTFVLVFVGTGSIMWPN--DPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKG 124 (274)
Q Consensus 47 ~~~~~~EfigTf~lv~~~~~~~~~~~--~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~ 124 (274)
+|++++||+||++|+|+++++....+ .+...+...+++++|+++++.+++++++||+|+|||||+++++.|+++|++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 68999999999999999998764321 1112245667999999999999999999999999999999999999999999
Q ss_pred hhhHhHHhHHHHHHHHHHHHhcCCCCC-C-----c-----ccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCC
Q psy8647 125 FFYIIMQCVGAVAGSAVLEAVTPNPCC-K-----L-----GMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDI 193 (274)
Q Consensus 125 ~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~-----~-----~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~ 193 (274)
+.|+++|++|+++|+.+++.+++++.. . . +.+.|. ..+..++++.|+++|++|+++++...|+++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~-- 158 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPG-GYSLLAALVCEVVLTAFFLLVILGATDKRAP-- 158 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCC-cccHHHHHHHHHHHHHHHHHHHHHHhCCCCC--
Confidence 999999999999999999988865321 0 0 111232 4477899999999999999999999886543
Q ss_pred CCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCC--CceeehhhhhhHHHHHHHHHHHHHhccC
Q psy8647 194 KGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHW--DNIWVYWAGPILGGVLAGAGCLCLCHSM 263 (274)
Q Consensus 194 ~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~--~~~wvy~v~p~~Ga~~a~~l~~~l~~~~ 263 (274)
....|+.+|+.+...++..+++||++|||||+|+|++++++| +++|+||+||++|+++++++|+++++++
T Consensus 159 ~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 159 AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 457899999999999999999999999999999999998866 5899999999999999999999997743
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=2.1e-43 Score=315.59 Aligned_cols=226 Identities=29% Similarity=0.414 Sum_probs=192.9
Q ss_pred cccCcCCCcchHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHH
Q psy8647 34 GVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIG 112 (274)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~ 112 (274)
.+-+++-.-+.+.+|.+++||+|||+++|+++++...... .+..+...+++++|+++.+.+++++++||+|+|||+|++
T Consensus 32 ~~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla 111 (274)
T PLN00183 32 LFGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIA 111 (274)
T ss_pred hccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 3444555555788899999999999999999987664321 112245568899999999999999999999999999999
Q ss_pred HHHhcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCC
Q psy8647 113 LFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTD 192 (274)
Q Consensus 113 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~ 192 (274)
+++.|+++|.+.+.|+++|++|+++|+.+++.+++... ....+.| ..+..++++.|+++|++|+++++...++++.
T Consensus 112 ~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p--~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 187 (274)
T PLN00183 112 FATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKP--AQGCSSAFWVEFIATFIVMFLAASLTSQPQS- 187 (274)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCC--cccHHHHHHHHHHHHHHHHHhhheeeccccC-
Confidence 99999999999999999999999999999999887643 2333333 4467899999999999999999998776532
Q ss_pred CCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccC
Q psy8647 193 IKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSM 263 (274)
Q Consensus 193 ~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~ 263 (274)
.+...++.+|+.+.+.+++.+++||+++||||+|++++.+.+|+++|+||++|++|+++++++|++++.+.
T Consensus 188 ~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 188 LGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred CCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 23467899999999999999999999999999999999999999999999999999999999999998653
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.7e-42 Score=302.75 Aligned_cols=212 Identities=39% Similarity=0.643 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCC--CCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccchh
Q psy8647 48 RALIAELIGTFVLVFVGTGSIMWPNDPN--TVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGF 125 (274)
Q Consensus 48 ~~~~~EfigTf~lv~~~~~~~~~~~~~~--~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~~ 125 (274)
|++++||+|||+|++.++++..+..... ..+...+++++|+.+.+.+++++++||+|+|||+|+++++.|+++|++.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5789999999999999999876532211 23456789999999999999999999999999999999999999999999
Q ss_pred hhHhHHhHHHHHHHHHHHHhcCCCCC---C-------cccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCC-CCC
Q psy8647 126 FYIIMQCVGAVAGSAVLEAVTPNPCC---K-------LGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRT-DIK 194 (274)
Q Consensus 126 ~yi~aQ~lGa~~g~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~-~~~ 194 (274)
.|+++|++|+++|+.+.+.+++++.. + ...+.|.++.+..++++.|+++|++|+++++...++++. ...
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~ 160 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPG 160 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCC
Confidence 99999999999999999999876432 1 122456677889999999999999999999998776553 234
Q ss_pred CchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcC---CCceeehhhhhhHHHHHHHHHHHHH
Q psy8647 195 GSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNH---WDNIWVYWAGPILGGVLAGAGCLCL 259 (274)
Q Consensus 195 ~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~---~~~~wvy~v~p~~Ga~~a~~l~~~l 259 (274)
...++.+|+.+.+..+..+++||+++||||++++++.++. |+++|+||++|++|+++|+++|+++
T Consensus 161 ~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999999999999999875 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=3.6e-40 Score=287.02 Aligned_cols=205 Identities=39% Similarity=0.646 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCC----CCC--CchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccchh
Q psy8647 52 AELIGTFVLVFVGTGSIMWPNDP----NTV--DVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGF 125 (274)
Q Consensus 52 ~EfigTf~lv~~~~~~~~~~~~~----~~~--~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~~ 125 (274)
+||+||++|+++++++....... ... +...+++++|+.+...+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987642111 111 456789999999999999999999999999999999999999999999
Q ss_pred hhHhHHhHHHHHHHHHHHHhcCCCCC-Ccc-cccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCC-CCchhHHHH
Q psy8647 126 FYIIMQCVGAVAGSAVLEAVTPNPCC-KLG-MTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDI-KGSVPVAVG 202 (274)
Q Consensus 126 ~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~-~~~~~~~iG 202 (274)
.|+++|++|+++|+.+.+.++++... +.. ...+.++.+..++++.|+++|++|+++++...++++... ....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999999876431 111 222344678899999999999999999999887655432 237899999
Q ss_pred HHHHHHHHhhccCcCCcccchhhHHHHHhhc--CCCceeehhhhhhHHHHHHHHHH
Q psy8647 203 LAITCCHLAAIKFTGASMNPARTLGPAVIGN--HWDNIWVYWAGPILGGVLAGAGC 256 (274)
Q Consensus 203 ~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~--~~~~~wvy~v~p~~Ga~~a~~l~ 256 (274)
+.+...++..+++||+++||||++++++.++ +|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999875
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.63 E-value=1.9e-15 Score=136.12 Aligned_cols=99 Identities=26% Similarity=0.325 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccch
Q psy8647 45 NIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKG 124 (274)
Q Consensus 45 ~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~ 124 (274)
+.++.++.||++|++|++++++...... ......++++|+.+++.+++.+++||+|+|||+|+++++.++ .|.+.
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~----~~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~ 231 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSR----AVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGI 231 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccc----cCCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccce
Confidence 5689999999999999999887654221 112236899999999999999999999999999999999866 68999
Q ss_pred hhhHhHHhHHHHHHHHHHHHhcCC
Q psy8647 125 FFYIIMQCVGAVAGSAVLEAVTPN 148 (274)
Q Consensus 125 ~~yi~aQ~lGa~~g~~~~~~~~~~ 148 (274)
|+||++|++|+++|+++++.+...
T Consensus 232 wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 232 WVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred eHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998753
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.60 E-value=5.6e-15 Score=129.69 Aligned_cols=99 Identities=28% Similarity=0.377 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCC--Cc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHI--SL 121 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~--~~ 121 (274)
.+.+|.++.|+++|++|++.++......+. ..+....++.+|+.+...++..+++||+|+|||+++++.+.++. +|
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~--~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~ 204 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNG--PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHW 204 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcccccc--CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhcccccc
Confidence 577899999999999999999887653211 12334578999999999999999999999999999999999998 79
Q ss_pred cchhhhHhHHhHHHHHHHHHHHH
Q psy8647 122 LKGFFYIIMQCVGAVAGSAVLEA 144 (274)
Q Consensus 122 ~~~~~yi~aQ~lGa~~g~~~~~~ 144 (274)
.+.++|+++|++|+++|+.+.+.
T Consensus 205 ~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 205 HYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ceeehhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999988664
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.59 E-value=3.8e-15 Score=134.74 Aligned_cols=108 Identities=21% Similarity=0.280 Sum_probs=89.5
Q ss_pred cccCCCCCChhHHHHHHHHHHHHHHHHhhheec--CCCCCCCCc--hhHHHHHHHHHHHHhhccCcCCcccchhhHHHHH
Q psy8647 155 MTGLNPSINATQGLIIEAIITFVLVLTVEAVCD--DRRTDIKGS--VPVAVGLAITCCHLAAIKFTGASMNPARTLGPAV 230 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~--~~~~~~~~~--~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~ 230 (274)
++.|.++++..+.++.|+++|++|++++++... ++....... .++.+|+++.+.+++.+++||+++||||++++++
T Consensus 61 ~~~~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al 140 (298)
T PLN00026 61 CDLPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAA 140 (298)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHH
Confidence 345666778889999999999999999986422 111111122 3578999999999999999999999999999999
Q ss_pred hhc-CCCceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 231 IGN-HWDNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 231 ~~~-~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
.+. .|.+.|+||++|++|+++|+++++.++++
T Consensus 141 ~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 141 LRHFPWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 866 79999999999999999999999999865
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.59 E-value=7.2e-15 Score=131.84 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccch
Q psy8647 45 NIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKG 124 (274)
Q Consensus 45 ~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~ 124 (274)
+.++.++.||++|+++++.+++...... . .....++.+|+.+.+.+++.+++||+|+|||+|+++++.+ .+|.+.
T Consensus 159 ~~~~~~~~E~v~T~iLv~~i~~~~~~~~---~-~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~ 233 (274)
T PLN00183 159 GCSSAFWVEFIATFIVMFLAASLTSQPQ---S-LGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDI 233 (274)
T ss_pred cHHHHHHHHHHHHHHHHHhhheeecccc---C-CCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhe
Confidence 4578999999999999999887755321 1 1123578899999999999999999999999999999987 489999
Q ss_pred hhhHhHHhHHHHHHHHHHHHhcCCCCC
Q psy8647 125 FFYIIMQCVGAVAGSAVLEAVTPNPCC 151 (274)
Q Consensus 125 ~~yi~aQ~lGa~~g~~~~~~~~~~~~~ 151 (274)
|+||++|++|+++|+.+.+.+..++..
T Consensus 234 wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 234 WIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999877643
No 20
>PLN00184 aquaporin NIP1; Provisional
Probab=99.58 E-value=4e-15 Score=134.77 Aligned_cols=102 Identities=26% Similarity=0.273 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhheecCCCC--CCCCc--hhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc-CC
Q psy8647 161 SINATQGLIIEAIITFVLVLTVEAVCDDRRT--DIKGS--VPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN-HW 235 (274)
Q Consensus 161 ~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~--~~~~~--~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~-~~ 235 (274)
+.+..+.++.|+++|++|+++.++....+.. ..... .++.+|+.+.+.+++.+++||+++|||+++++++.++ .|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 3456789999999999999999876422211 11233 3455699999999999999999999999999999877 89
Q ss_pred CceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 236 DNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 236 ~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
...|+||++|++|+++|+++++.++..
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998853
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.53 E-value=3.7e-14 Score=123.49 Aligned_cols=96 Identities=24% Similarity=0.286 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhc-CCCcc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSG-HISLL 122 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g-~~~~~ 122 (274)
.+.++.++.|+++|++|++..+.....+++. ......++.+|+.+...++..+++||+|+|||++++..+.+ ..+|.
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~--~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~ 196 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRV--PRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWG 196 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCC--CCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcccccc
Confidence 4678999999999999999988776532211 12225889999999999999999999999999999999976 57899
Q ss_pred chhhhHhHHhHHHHHHHHH
Q psy8647 123 KGFFYIIMQCVGAVAGSAV 141 (274)
Q Consensus 123 ~~~~yi~aQ~lGa~~g~~~ 141 (274)
+.|+|+++|++|+++++.+
T Consensus 197 ~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 197 NHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ceeHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 22
>KOG0223|consensus
Probab=99.50 E-value=4e-14 Score=124.13 Aligned_cols=107 Identities=23% Similarity=0.311 Sum_probs=91.8
Q ss_pred CcCCCcc-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHH
Q psy8647 37 GIHDVRD-KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFC 115 (274)
Q Consensus 37 ~~~~~~~-~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l 115 (274)
+.....+ .+.+|.++.|++.||.|+++.++...+. + .....++.+|+++.+.+.+.+++||+++|||+++++++
T Consensus 121 ~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~----~-~~~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAv 195 (238)
T KOG0223|consen 121 GLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDP----R-RSELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAV 195 (238)
T ss_pred ceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecC----C-CcccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHH
Confidence 4444444 5668999999999999999888743321 1 11678999999999999999999999999999999999
Q ss_pred hcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCC
Q psy8647 116 SGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNP 149 (274)
Q Consensus 116 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 149 (274)
..+ +|..+|+||++|++|+++++++.+.++.++
T Consensus 196 v~~-~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 196 VYG-SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred Hhc-CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 988 599999999999999999999999998775
No 23
>PLN00167 aquaporin TIP5; Provisional
Probab=99.45 E-value=2.3e-13 Score=121.20 Aligned_cols=102 Identities=26% Similarity=0.320 Sum_probs=85.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhheecCCC---CC----C--CCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHh
Q psy8647 161 SINATQGLIIEAIITFVLVLTVEAVCDDRR---TD----I--KGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVI 231 (274)
Q Consensus 161 ~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~---~~----~--~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~ 231 (274)
..+..+.++.|+++|++|+++.++....++ .+ . ....++.+|+.+.+.+++.+++||+++|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 445678999999999999999987754221 11 1 11478999999999999999999999999999999998
Q ss_pred hc-CCCceeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 232 GN-HWDNIWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 232 ~~-~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
++ .|...|+||++|++|+++|+.+++.++..
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 66 68999999999999999999999888654
No 24
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.39 E-value=4.7e-13 Score=121.51 Aligned_cols=100 Identities=28% Similarity=0.440 Sum_probs=83.9
Q ss_pred ChhHHHHHHHHHHHHHHHHhhheecCCCC-C-CCC--chhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc-CCCc
Q psy8647 163 NATQGLIIEAIITFVLVLTVEAVCDDRRT-D-IKG--SVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN-HWDN 237 (274)
Q Consensus 163 ~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~-~-~~~--~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~-~~~~ 237 (274)
+..+.++.|+++|++|+++.++....... + ..+ ..++.+|+++.+.+++.+++||+++|||+++++++.++ .|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45688999999999999988876432211 1 112 35678899999999999999999999999999999987 8999
Q ss_pred eeehhhhhhHHHHHHHHHHHHHhcc
Q psy8647 238 IWVYWAGPILGGVLAGAGCLCLCHS 262 (274)
Q Consensus 238 ~wvy~v~p~~Ga~~a~~l~~~l~~~ 262 (274)
.|.||++|++|+++|+++.+.++.+
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888765
No 25
>PLN00166 aquaporin TIP2; Provisional
Probab=99.34 E-value=7.7e-12 Score=111.12 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLK 123 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~ 123 (274)
.+.++.++.|+++||+|++..+......+ ........++.+|+.+...+...++.||+.+|||+++++.+..+ +|..
T Consensus 137 ~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~--~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~ 213 (250)
T PLN00166 137 LGAIEGVVMEIVVTFALVYTVYATAADPK--KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQ 213 (250)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccccc--ccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcc
Confidence 45689999999999999998887644221 11112357899999999999999999999999999999999876 6889
Q ss_pred hhhhHhHHhHHHHHHHHHHHHhcCCCC
Q psy8647 124 GFFYIIMQCVGAVAGSAVLEAVTPNPC 150 (274)
Q Consensus 124 ~~~yi~aQ~lGa~~g~~~~~~~~~~~~ 150 (274)
.|+||++|++|+++++++.+.++.+..
T Consensus 214 ~wvywvgPi~Ga~~aa~~y~~l~~~~~ 240 (250)
T PLN00166 214 IWIYWVGPLVGGALAGLIYGDVFIGSY 240 (250)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccC
Confidence 999999999999999999987765543
No 26
>PRK05420 aquaporin Z; Provisional
Probab=99.33 E-value=1.1e-11 Score=108.98 Aligned_cols=101 Identities=18% Similarity=0.229 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcC-CCcc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGH-ISLL 122 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~-~~~~ 122 (274)
.+..+.++.|+++|++|+++.+.....+ ......++.+|+.+.......++.||+.+|||+++++.+..+ .++.
T Consensus 129 ~~~~~~~~~E~v~T~iLv~~i~~~~~~~-----~~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~ 203 (231)
T PRK05420 129 YSLLAALVCEVVLTAFFLLVILGATDKR-----APAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALE 203 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCcc
Confidence 4678999999999999999888765422 112357899999999999999999999999999999998753 3456
Q ss_pred chhhhHhHHhHHHHHHHHHHHHhcCCC
Q psy8647 123 KGFFYIIMQCVGAVAGSAVLEAVTPNP 149 (274)
Q Consensus 123 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 149 (274)
..|+||++|++|+++++.+.+.+..++
T Consensus 204 ~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 204 QLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred ceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 899999999999999999998887665
No 27
>PLN00027 aquaporin TIP; Provisional
Probab=99.32 E-value=1.2e-11 Score=110.12 Aligned_cols=102 Identities=22% Similarity=0.329 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLK 123 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~ 123 (274)
.+.++.++.|+++||+|++..+......+ +.......++.+|+.+....+..++.||+.+|||+++++.+... +|..
T Consensus 139 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~--~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~ 215 (252)
T PLN00027 139 VGVWNAFVFEIVMTFGLVYTVYATAVDPK--KGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTN 215 (252)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccccc--cCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchh
Confidence 45789999999999999998876543221 11122367899999999999999999999999999999999876 6889
Q ss_pred hhhhHhHHhHHHHHHHHHHHHhcCC
Q psy8647 124 GFFYIIMQCVGAVAGSAVLEAVTPN 148 (274)
Q Consensus 124 ~~~yi~aQ~lGa~~g~~~~~~~~~~ 148 (274)
.|+||++|++|+++|+.+.+.++.+
T Consensus 216 ~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 216 HWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998754
No 28
>KOG0224|consensus
Probab=99.30 E-value=2.7e-12 Score=114.14 Aligned_cols=102 Identities=23% Similarity=0.303 Sum_probs=84.6
Q ss_pred ChhHHHHHHHHHHHHHHHHhhheecCCC---CCCCC--chhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc-CCC
Q psy8647 163 NATQGLIIEAIITFVLVLTVEAVCDDRR---TDIKG--SVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN-HWD 236 (274)
Q Consensus 163 ~~~~~~~~E~~~T~~Lv~~vl~~~~~~~---~~~~~--~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~-~~~ 236 (274)
...+.+++||++|++|++.-++..-+.. .+.++ ...+.+|++++..+++++.+||+++|||.+++..+.++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 4678899999999999998776533221 12222 45788999999999999999999999999999999977 899
Q ss_pred ceeehhhhhhHHHHHHHHHHHHHhccCC
Q psy8647 237 NIWVYWAGPILGGVLAGAGCLCLCHSMP 264 (274)
Q Consensus 237 ~~wvy~v~p~~Ga~~a~~l~~~l~~~~~ 264 (274)
.+.+|.++|++||++|+.....+|.+.-
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i 137 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDAI 137 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988777776543
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1.2e-11 Score=108.44 Aligned_cols=106 Identities=24% Similarity=0.264 Sum_probs=86.5
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhee---c-CC--CCCCC-CchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhc-C
Q psy8647 163 NATQGLIIEAIITFVLVLTVEAVC---D-DR--RTDIK-GSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGN-H 234 (274)
Q Consensus 163 ~~~~~~~~E~~~T~~Lv~~vl~~~---~-~~--~~~~~-~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~-~ 234 (274)
+..+.++.|+++|++|++...+.. . .+ +...+ ....+.+|+.|.+.+++.+++||+++|||.+++.++.++ +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 345678999999999999766542 1 11 11111 136788999999999999999999999999999999987 7
Q ss_pred CCceeehhhhhhHHHHHHHHHHHHHhccCCCCCC
Q psy8647 235 WDNIWVYWAGPILGGVLAGAGCLCLCHSMPSLQP 268 (274)
Q Consensus 235 ~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~~~~~ 268 (274)
|+....||++|++|+++|+.+...++.++..+.+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 9999999999999999999988888887666555
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.17 E-value=1.7e-10 Score=100.96 Aligned_cols=96 Identities=23% Similarity=0.273 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccc
Q psy8647 44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLK 123 (274)
Q Consensus 44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~ 123 (274)
.+.++.++.|+++|++|++........+++. ......++.+|+.+.......++.||+.+|||++++..+.... |..
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~--~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~ 208 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADDKRKF--PLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDY 208 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS--TSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTT
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhccccccc--ccccccceeEEEEEeecccccccccccccCchhhcCceeeccc-CCe
Confidence 5678999999999999999888776543211 1122468899999999999999999999999999999998875 999
Q ss_pred hhhhHhHHhHHHHHHHHHH
Q psy8647 124 GFFYIIMQCVGAVAGSAVL 142 (274)
Q Consensus 124 ~~~yi~aQ~lGa~~g~~~~ 142 (274)
.|+||+++++|+++|+.++
T Consensus 209 ~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 209 FWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEehHHHHHHHHHhhC
Confidence 9999999999999998763
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=94.53 E-value=2 Score=38.61 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=91.2
Q ss_pred CchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCC---C---
Q psy8647 78 DVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPC---C--- 151 (274)
Q Consensus 78 ~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~--- 151 (274)
..+..++.+++++.+.++.-+..--+ |--........++++|++.+--|.-=.+|=++|+.++..++.-.. .
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 34566667777777776554443101 434444456678899988766665555555555555544441110 0
Q ss_pred Cc-----ccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhH
Q psy8647 152 KL-----GMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTL 226 (274)
Q Consensus 152 ~~-----~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~ 226 (274)
.. ....-.-+.+..+.|.--.++-++.++.+...-..|.. .-.-+.+-+.+.. +...++.=...|=..--
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~---~~K~~~m~~pv~~--Fv~~GfeH~VANm~~i~ 215 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDG---AAKIFAIILPVML--FVASGFEHSVANMFMIP 215 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccch---hhHHHHHHHHHHH--HHHcCCceeeehHHHHH
Confidence 00 00011123456777887788888888877665332221 1223334444433 33333444455532221
Q ss_pred HHHHhhc--CCCc-----eeehhhhhhHH-HHHHHHHHHHHhccCCCC
Q psy8647 227 GPAVIGN--HWDN-----IWVYWAGPILG-GVLAGAGCLCLCHSMPSL 266 (274)
Q Consensus 227 ~~~~~~~--~~~~-----~wvy~v~p~~G-a~~a~~l~~~l~~~~~~~ 266 (274)
-.+...+ +|.. ...-.+|.++| +++-++.|+++++++.+.
T Consensus 216 ~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~~ 263 (265)
T COG2116 216 WAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNRY 263 (265)
T ss_pred HHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhccccccc
Confidence 1222222 3433 22334555555 455677788887755443
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=90.41 E-value=3.5 Score=37.17 Aligned_cols=178 Identities=14% Similarity=0.092 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHhhccc-CCcccchHHHHHHHHhcCCCccchhhhHh----HHhHHHHHHHHHHHHhcC---CCCCC
Q psy8647 81 KIALTFGFVIATIAQAIGHV-SGCHINPAVTIGLFCSGHISLLKGFFYII----MQCVGAVAGSAVLEAVTP---NPCCK 152 (274)
Q Consensus 81 ~~~l~~g~~~~~~i~~~~~i-SGah~NPAvTl~~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~~~~~~~~---~~~~~ 152 (274)
..++.+++++.+.+..-+.. +| |=.......+.|+.++++.+-.|. +-++|+++-+.+.....+ +....
T Consensus 60 i~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~ 136 (268)
T PRK11562 60 VMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTS 136 (268)
T ss_pred HHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH
Confidence 34555666666665443332 22 444444567778888877655544 455555554444433211 00000
Q ss_pred cc--cccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHH
Q psy8647 153 LG--MTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAV 230 (274)
Q Consensus 153 ~~--~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~ 230 (274)
.- ...-..+.+..+.|+-=.++-++.++.+......+. . -.-+.+-+.+.+-+. .++.=...|= --+...+
T Consensus 137 ~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~~~~--~--gKi~~i~~pI~~Fv~--~GFEH~IANm-~~~~l~~ 209 (268)
T PRK11562 137 IVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIRTEG--A--AKFIAIWWCLLAFIA--SGYEHSVANM-TLFALSW 209 (268)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccc--c--chhHHHHHHHHHHHH--cCCcchhHhH-HHHHHHH
Confidence 00 000011345677888888888888888765533221 1 122333333333222 2222233441 1222222
Q ss_pred hhcC-----C----CceeehhhhhhHHH-HHHHHHHHHHhccCCCCCC
Q psy8647 231 IGNH-----W----DNIWVYWAGPILGG-VLAGAGCLCLCHSMPSLQP 268 (274)
Q Consensus 231 ~~~~-----~----~~~wvy~v~p~~Ga-~~a~~l~~~l~~~~~~~~~ 268 (274)
..+. | .+...-.+|.++|+ ++.++.|+++++++++.++
T Consensus 210 ~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~~~ 257 (268)
T PRK11562 210 FGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVA 257 (268)
T ss_pred HccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCchh
Confidence 2211 1 23344567888888 5677888888886665444
No 33
>PRK09713 focB putative formate transporter; Provisional
Probab=88.21 E-value=20 Score=32.63 Aligned_cols=102 Identities=12% Similarity=-0.010 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHhhccc-CCcccchHHHHHHHHhcCCCccchh----hhHhHHhHHHHHHHHHHHHhcCCC--CCCc
Q psy8647 81 KIALTFGFVIATIAQAIGHV-SGCHINPAVTIGLFCSGHISLLKGF----FYIIMQCVGAVAGSAVLEAVTPNP--CCKL 153 (274)
Q Consensus 81 ~~~l~~g~~~~~~i~~~~~i-SGah~NPAvTl~~~l~g~~~~~~~~----~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~ 153 (274)
..++.+.+++.+++..-+.. || |=. ++.....++.+|++.. +-+++-++|+++-+.+.+..-... ....
T Consensus 69 l~g~~F~vGLilIv~~g~ELfTg---N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~ 144 (282)
T PRK09713 69 VGGLCFTLGFILLAVCGTSLFTS---SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMW 144 (282)
T ss_pred HHHHHHHHHHHHHHHhCccccHH---HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhH
Confidence 44555666666665544432 22 222 2233567888887766 345567777776666654321110 0000
Q ss_pred c-----cccCCCCCChhHHHHHHHHHHHHHHHHhhhee
Q psy8647 154 G-----MTGLNPSINATQGLIIEAIITFVLVLTVEAVC 186 (274)
Q Consensus 154 ~-----~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~ 186 (274)
+ ...-..+.+..+.|+--+++-++.++.+....
T Consensus 145 ~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~~ 182 (282)
T PRK09713 145 GVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSY 182 (282)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00011245778888888999999988887553
No 34
>PRK10805 formate transporter; Provisional
Probab=85.54 E-value=28 Score=31.63 Aligned_cols=101 Identities=10% Similarity=0.034 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHhhccc-CCcccchHHHHHHHHhcCCCccchh----hhHhHHhHHHHHHHHHHHHhcCCCCC--Cc
Q psy8647 81 KIALTFGFVIATIAQAIGHV-SGCHINPAVTIGLFCSGHISLLKGF----FYIIMQCVGAVAGSAVLEAVTPNPCC--KL 153 (274)
Q Consensus 81 ~~~l~~g~~~~~~i~~~~~i-SGah~NPAvTl~~~l~g~~~~~~~~----~yi~aQ~lGa~~g~~~~~~~~~~~~~--~~ 153 (274)
..++.+.+++.+.+..-+.. +| |-..++ ..+.+|.++.+.. +-.++-++|+++-+.+.+..-..... ..
T Consensus 70 l~~~~F~vGlilIvl~g~eLFTg---n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~ 145 (285)
T PRK10805 70 VGGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQW 145 (285)
T ss_pred HHHHHHHHHHHHHHHhCcccchh---hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHH
Confidence 44555666666665544443 44 655553 4678888888766 44456666666665554432110000 00
Q ss_pred c-----cccCCCCCChhHHHHHHHHHHHHHHHHhhhe
Q psy8647 154 G-----MTGLNPSINATQGLIIEAIITFVLVLTVEAV 185 (274)
Q Consensus 154 ~-----~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~ 185 (274)
+ ...-..+.+..+.|+-=+++-++.++.+...
T Consensus 146 ~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 146 GLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000113467788888888888888888754
No 35
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=50.58 E-value=2.7e+02 Score=27.79 Aligned_cols=137 Identities=18% Similarity=0.080 Sum_probs=72.9
Q ss_pred HHHhhcccCCccc---chHHHHHHHHhcCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHH
Q psy8647 93 IAQAIGHVSGCHI---NPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLI 169 (274)
Q Consensus 93 ~i~~~~~iSGah~---NPAvTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (274)
+++..-.-++|+. -.+|+.+.+....-+.+....++.+.++|+.+|....+.++|.-. + +. .+
T Consensus 355 l~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~------------~-f~-~L 420 (650)
T PF04632_consen 355 LFWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD------------G-FP-LL 420 (650)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC------------c-HH-HH
Confidence 3333333344553 333444444444557788899999999999999999998887642 1 11 11
Q ss_pred HHHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHH
Q psy8647 170 IEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGG 249 (274)
Q Consensus 170 ~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga 249 (274)
.=+++-+++... +...+++ ......++.+......... .....|++.-+ -=.++-++|.
T Consensus 421 ~l~l~~~l~~~~-~~~~~p~------~~~~g~~~~v~f~~~~~~~-n~~~~d~~~f~-------------n~~la~l~G~ 479 (650)
T PF04632_consen 421 ALVLAPFLFLGG-LLMARPR------TAYIGLGFAVFFLLLLGPG-NPYSYDFATFL-------------NRALAILLGI 479 (650)
T ss_pred HHHHHHHHHHHH-HHHcCch------HHHHHHHHHHHHHHHhcCC-CCCCCCHHHHH-------------HHHHHHHHHH
Confidence 111111111111 1222222 3445555555554443322 23334443322 2245678888
Q ss_pred HHHHHHHHHHhccCC
Q psy8647 250 VLAGAGCLCLCHSMP 264 (274)
Q Consensus 250 ~~a~~l~~~l~~~~~ 264 (274)
+++.+.++.+.+..+
T Consensus 480 ~~a~l~~~li~p~~~ 494 (650)
T PF04632_consen 480 VIAALVFRLIRPFSP 494 (650)
T ss_pred HHHHHHHHHHCCCCh
Confidence 898888888866433
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=40.58 E-value=9.5 Score=29.70 Aligned_cols=18 Identities=11% Similarity=0.198 Sum_probs=16.5
Q ss_pred CCcccchHHHHHHHHhcC
Q psy8647 101 SGCHINPAVTIGLFCSGH 118 (274)
Q Consensus 101 SGah~NPAvTl~~~l~g~ 118 (274)
|+||+||.+.++..+..+
T Consensus 8 t~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR 25 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHhcc
Confidence 789999999999999865
No 37
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=35.13 E-value=98 Score=27.46 Aligned_cols=106 Identities=13% Similarity=-0.045 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccchhhhHh----HHhHHHHHHHHHHHHhcCCCC-CCc-
Q psy8647 80 TKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYII----MQCVGAVAGSAVLEAVTPNPC-CKL- 153 (274)
Q Consensus 80 ~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~~~~~~~~~~~-~~~- 153 (274)
...++.+++++..++..-+..- -=|-.......+.++.+|++.+--|. +-++|+++-+.+.+....... ...
T Consensus 58 l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~ 135 (250)
T PF01226_consen 58 LVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMG 135 (250)
T ss_dssp HHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHH
Confidence 3555666666666665544431 12666566677788889887655554 455555554444443322220 000
Q ss_pred ----ccccCCCCCChhHHHHHHHHHHHHHHHHhhheec
Q psy8647 154 ----GMTGLNPSINATQGLIIEAIITFVLVLTVEAVCD 187 (274)
Q Consensus 154 ----~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~ 187 (274)
....-..+.+..+.|+.=.++.++.++.+.....
T Consensus 136 ~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~ 173 (250)
T PF01226_consen 136 EYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFA 173 (250)
T ss_dssp HHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001112446788888888889988888876643
No 38
>PRK15120 lipopolysaccharide ABC transporter permease LptF; Provisional
Probab=34.94 E-value=1.5e+02 Score=27.42 Aligned_cols=60 Identities=7% Similarity=0.105 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhccc-CCcccchHHH
Q psy8647 51 IAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHV-SGCHINPAVT 110 (274)
Q Consensus 51 ~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~i-SGah~NPAvT 110 (274)
++.=+.++++.+++..........+.......++..++.+..+...+... ..+++||.+.
T Consensus 270 la~Pl~~l~l~llavpl~~~~~R~g~~~~i~~~i~~~~~y~~l~~~~~~l~~~g~lpp~la 330 (366)
T PRK15120 270 LTLVFSVFIMALMVVPLSVVNPRQGRVLSMLPAMLLYLIFFLLQTSLRSNGGKGKLDPMIW 330 (366)
T ss_pred HHHHHHHHHHHHHHhhhcccCCccccchhHHHHHHHHHHHHHHHHHHHHHHHCCCCChHHH
Confidence 67788888888887765553322222233444455555444444333332 2355665444
No 39
>PRK11427 multidrug efflux system protein MdtO; Provisional
Probab=30.22 E-value=6.3e+02 Score=26.08 Aligned_cols=29 Identities=21% Similarity=0.029 Sum_probs=23.3
Q ss_pred CccchhhhHhHHhHHHHHHHHHHHHhcCC
Q psy8647 120 SLLKGFFYIIMQCVGAVAGSAVLEAVTPN 148 (274)
Q Consensus 120 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 148 (274)
...|....+++.++|+++|..+...+.|.
T Consensus 394 T~sRa~~RiiGTliGallA~ll~v~l~P~ 422 (683)
T PRK11427 394 SYQKMVLRFGGAFCGAILALLFTLLVMPW 422 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34577778899999999999998877754
No 40
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=29.42 E-value=4.7e+02 Score=24.32 Aligned_cols=138 Identities=17% Similarity=0.153 Sum_probs=68.3
Q ss_pred CcccchHHHHHHHHhcC-CCccchh-hhHhHHhHHHHHHH-HHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHH
Q psy8647 102 GCHINPAVTIGLFCSGH-ISLLKGF-FYIIMQCVGAVAGS-AVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVL 178 (274)
Q Consensus 102 Gah~NPAvTl~~~l~g~-~~~~~~~-~yi~aQ~lGa~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L 178 (274)
|+|=+ |-.++...-.| ++.+++. +--+..++|+.++. -..+.+..+-. .| ...+. .+..|...+.++
T Consensus 20 Gand~-ana~gtaVgs~alt~~~Av~laavf~f~Ga~l~g~~V~~TI~~~iv------~~-~~~~~--~~~~~~~~aaLl 89 (326)
T COG0306 20 GANDT-ANAVGTAVGSGALTPRQAVLLAAVFNFLGALLGGGNVAETIGSGIV------DP-GLLND--SLTPAGVLAALL 89 (326)
T ss_pred cccch-hhhhhhhhccCCccHHHHHHHHHHHHHHHHHHcCccHHHHHhcCCC------Cc-hhccc--hhhHHHHHHHHH
Confidence 55633 66777776544 4544433 33456777766544 33333322211 11 12222 455666666655
Q ss_pred HHHhhheecCCCCCCCCchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHH
Q psy8647 179 VLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLC 258 (274)
Q Consensus 179 v~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~ 258 (274)
--.+.........-+-....-.+|..+++..-..+. .+.-..++.- .-.+++.|++|..++.++|+.
T Consensus 90 aa~~w~~ia~~~GiP~StshaiiGaiiG~gla~~~~-----~~~~~~~~~I--------v~swvlsPii~~~ia~~l~~~ 156 (326)
T COG0306 90 AAILWNLIATYLGIPVSTSHALIGAIIGAGLALGGG-----VVDWGVLGKI--------VASWVLSPILGGVLAYLLYSL 156 (326)
T ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHccc-----chhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 554433211111112224455667666665443221 1211111111 124578999999999999888
Q ss_pred Hhcc
Q psy8647 259 LCHS 262 (274)
Q Consensus 259 l~~~ 262 (274)
+.+.
T Consensus 157 ~~~~ 160 (326)
T COG0306 157 LRRL 160 (326)
T ss_pred HHHH
Confidence 7664
No 41
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=26.41 E-value=60 Score=21.76 Aligned_cols=37 Identities=5% Similarity=0.197 Sum_probs=25.5
Q ss_pred ccccccCcCCCcc---hHHHHHHHHHHHHHHHHHHHHHhh
Q psy8647 31 RMRGVIGIHDVRD---KNIWRALIAELIGTFVLVFVGTGS 67 (274)
Q Consensus 31 ~~~~~~~~~~~~~---~~~~~~~~~EfigTf~lv~~~~~~ 67 (274)
+.++..|.++... +++|+.++-+|...+++++++++.
T Consensus 18 ~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~ 57 (64)
T smart00831 18 RRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAV 57 (64)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHH
Confidence 3444556666544 568999998998888887765543
No 42
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=23.36 E-value=21 Score=33.12 Aligned_cols=20 Identities=25% Similarity=0.368 Sum_probs=17.1
Q ss_pred cccCCcccchHHHHHHHHhc
Q psy8647 98 GHVSGCHINPAVTIGLFCSG 117 (274)
Q Consensus 98 ~~iSGah~NPAvTl~~~l~g 117 (274)
+.=||||+.||+.++-.+..
T Consensus 8 ~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 8 GGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred cCCcHHHHHHHHHHHHHHHh
Confidence 44589999999999999875
No 43
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=22.53 E-value=5.3e+02 Score=22.56 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=42.5
Q ss_pred chHHHHHHHHhcCCCccchhhhHh----HHhHHHHHHHHHHHHhcC---CC--CC----CcccccCCCCCChhHHHHHHH
Q psy8647 106 NPAVTIGLFCSGHISLLKGFFYII----MQCVGAVAGSAVLEAVTP---NP--CC----KLGMTGLNPSINATQGLIIEA 172 (274)
Q Consensus 106 NPAvTl~~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~~~~~~~~---~~--~~----~~~~~~~~~~~~~~~~~~~E~ 172 (274)
|-.......+.||.+|.+.+-.|. +-++|+++-+.+...... +. .. +... -..+.+..+.++.=+
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~--~K~~~~~~~~f~~gi 145 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAE--HKAHHTFVEAFFLGI 145 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHH--HhhcCCHHHHHHHHH
Confidence 444444457788888877655554 455555554444433211 11 00 0010 112446777888888
Q ss_pred HHHHHHHHHhhhe
Q psy8647 173 IITFVLVLTVEAV 185 (274)
Q Consensus 173 ~~T~~Lv~~vl~~ 185 (274)
++.++..+.+...
T Consensus 146 lcn~lV~lav~~~ 158 (239)
T TIGR00790 146 LCNWLVCLAVWMS 158 (239)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877643
No 44
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=21.57 E-value=2.1e+02 Score=22.87 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHh
Q psy8647 132 CVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLA 211 (274)
Q Consensus 132 ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~ 211 (274)
.+|+.+|+.+=|.+...-.... ..+ -++..+..-.++++++-+..-.... +.... ..+...+.+.. +
T Consensus 10 ~iGG~lGa~~Ry~l~~~~~~~~-----~~~-fP~gTl~VNi~GsfllG~~~~~~~~-~~~~~---~~~~~~l~tGf---l 76 (134)
T PRK14217 10 AIGGSLGAMSRYLVTIMAQNAW-----GIK-FPYGTLLVNTLGSFLAGFFLIVLVG-RFSAE---ESFRLFLFTGF---L 76 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-----CCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCCC---HHHHHHHHHHH---h
Confidence 3888998886665432110000 011 2345788899999988776533222 11111 11222222221 1
Q ss_pred hccCcCCcccchhhHHHHHh----hcCCCceeehhhhhhHHHHHHHHHHHHH
Q psy8647 212 AIKFTGASMNPARTLGPAVI----GNHWDNIWVYWAGPILGGVLAGAGCLCL 259 (274)
Q Consensus 212 ~~~~tG~~lNPAr~~~~~~~----~~~~~~~wvy~v~p~~Ga~~a~~l~~~l 259 (274)
+.+|-- .+++.-.. .++|.....|++..++++++++++-..+
T Consensus 77 -GgfTTF-----STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 122 (134)
T PRK14217 77 -GAFTTF-----SSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFIGTLV 122 (134)
T ss_pred -chhccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 212211 13332222 4577777889999999999998775544
No 45
>PF14990 DUF4516: Domain of unknown function (DUF4516)
Probab=21.13 E-value=2.3e+02 Score=18.58 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=29.6
Q ss_pred cCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCC
Q psy8647 117 GHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC 151 (274)
Q Consensus 117 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~ 151 (274)
++.+|.+-+....+-++.-++|+-++..+++++..
T Consensus 3 ~Gv~~~~yl~~~~~s~~sM~aGA~vVH~~ykPdlt 37 (47)
T PF14990_consen 3 AGVSWPSYLKSLVASLLSMLAGASVVHNIYKPDLT 37 (47)
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhHHHHHHhCccCC
Confidence 34688888888888899999999999999998763
No 46
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=21.02 E-value=2.6e+02 Score=22.26 Aligned_cols=109 Identities=16% Similarity=0.038 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHHHHHHHHHHh
Q psy8647 132 CVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLA 211 (274)
Q Consensus 132 ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG~~v~~~~~~ 211 (274)
.+|+.+|+.+=|.+-..-.. ...++ -+...+..-.+++|++-+..-...+ +... ..++...+.++. +
T Consensus 14 ~~GG~~Ga~lRy~l~~~~~~-----~~~~~-fP~gTl~VNv~GsfllG~l~~~~~~-~~~~---~~~~~~~l~tGf---l 80 (133)
T PRK14218 14 MLGGAFGSGLRFVIGSCLLQ-----RFGAG-FPWGTLAVNLIGSFVAGFLLIWLDK-RGSA---GWPWRMLLIVGL---I 80 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----hcCCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCC---CHHHHHHHHHHH---h
Confidence 48999998877665321100 00111 2445788999999998766533222 1111 112222222221 1
Q ss_pred hccCcCCcccchhhHHHHHh----hcCCCceeehhhhhhHHHHHHHHHHHHH
Q psy8647 212 AIKFTGASMNPARTLGPAVI----GNHWDNIWVYWAGPILGGVLAGAGCLCL 259 (274)
Q Consensus 212 ~~~~tG~~lNPAr~~~~~~~----~~~~~~~wvy~v~p~~Ga~~a~~l~~~l 259 (274)
+.+|-- .+++.-.. .++|.....|.+..++++++++.+-..+
T Consensus 81 -GgfTTF-----STf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 126 (133)
T PRK14218 81 -GGLTTF-----SSLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGARL 126 (133)
T ss_pred -chhccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211 23333332 3566667789999999999998875544
Done!