RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8651
(302 letters)
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 238 bits (610), Expect = 6e-79
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEH 158
IVGG+ K +PW+ L + CGA+L++ +++AAHC+ G + P + LG H
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLH 60
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS- 217
+ S S + R + + +P ++ +NDIA++ +E V++ I P LP +
Sbjct: 61 MK-SNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNY-TDYIQPISLPEENQ 118
Query: 218 ---------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 262
+ + TA+ L++ +VP+LS E C+ IT NM+CAGY E
Sbjct: 119 VFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQ-MPEYNITENMICAGYEE 177
Query: 263 GKRDSCQGDSGGPL 276
G DSCQGDSGGPL
Sbjct: 178 GGIDSCQGDSGGPL 191
Score = 118 bits (297), Expect = 5e-32
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
++ G+ +AGWG + + TA+ L++ +VP+LS E C+ IT NM+CAGY
Sbjct: 117 NQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQ-MPEYNITENMICAGY 175
Query: 62 AEGKRDSCQGDSGGPL 77
EG DSCQGDSGGPL
Sbjct: 176 EEGGIDSCQGDSGGPL 191
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 232 bits (593), Expect = 3e-76
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 158
IVGG + +EFPW ++ +K +CG ++I R V+ AAHC++G P + + +GEH
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEH 60
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP---- 214
D + + V + ++ + ND+++++ + F + P C P
Sbjct: 61 DSSAAST--VRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITF-DINVGPICAPDPAN 117
Query: 215 ------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 262
G LR V + I + C + Y++ I ++M+CA
Sbjct: 118 DYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAV-YTSDTIYDDMICATDNT 176
Query: 263 GK--RDSCQGDSGGPL 276
G RDSCQGDSGGPL
Sbjct: 177 GMTDRDSCQGDSGGPL 192
Score = 111 bits (280), Expect = 1e-29
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 5 NYTGKIGIVAGWGRLDER-KPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 63
+Y + +GWG ++ LR V + I + C + Y++ I ++M+CA
Sbjct: 118 DYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAV-YTSDTIYDDMICATDNT 176
Query: 64 GK--RDSCQGDSGGPL 77
G RDSCQGDSGGPL
Sbjct: 177 GMTDRDSCQGDSGGPL 192
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 230 bits (589), Expect = 1e-75
Identities = 66/199 (33%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 159
IVGG V E PW L G CG TLI V++AAHC + + N + + LGEHD
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS-- 217
+ R+V + I + N+DIALL + V + P CLP +
Sbjct: 61 LSEHDG--DEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL-TDHVVPLCLPERTFS 117
Query: 218 -----------------LDERKPTANSLRKVEVPILSEEECKSAGYSAS---RITNNMLC 257
L +R TA L + VP L ++C IT M C
Sbjct: 118 ERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFC 177
Query: 258 AGYAEGKRDSCQGDSGGPL 276
AGY++G +DSC+GDSGGP
Sbjct: 178 AGYSDGSKDSCKGDSGGPH 196
Score = 117 bits (295), Expect = 1e-31
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSAS---RITNNMLC 58
+ + +V+GWG+L +R TA L + VP L ++C IT M C
Sbjct: 118 ERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFC 177
Query: 59 AGYAEGKRDSCQGDSGGPL 77
AGY++G +DSC+GDSGGP
Sbjct: 178 AGYSDGSKDSCKGDSGGPH 196
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 235 bits (601), Expect = 2e-75
Identities = 75/276 (27%), Positives = 116/276 (42%), Gaps = 40/276 (14%)
Query: 54 NNMLCAGYAEGKRDSCQGDSGGPLQIAVARPGKMEVIACGQVERNQRIVGGNVTKLHEFP 113
LC G G R C + V K E CG +QR+ G KL P
Sbjct: 74 QKALC-GEFNGVRHFCCPSANIQHNSKVMSLFKDENFDCGNF-LSQRVSNGYEVKLSSRP 131
Query: 114 WIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESV-- 167
W+A L + +F CG +I++R++LTAAHC+ G+ ++ LGEH ++ +
Sbjct: 132 WMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQ 191
Query: 168 --------PVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSLD 219
PV+ +++ + H + + +DIALL++ V F+ I P CLP
Sbjct: 192 GRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQ-KHIKPICLPITDEL 250
Query: 220 ------------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 261
E +++ L + VP+ C A Y + + LC G
Sbjct: 251 KEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQA-YR-RAVPLSQLCVGGG 308
Query: 262 EGKRDSCQGDSGGPLQIAVARPGKMEAT--LSKVVS 295
+ + DSC+GDSGGPLQ G+ +VS
Sbjct: 309 DLQ-DSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVS 343
Score = 103 bits (258), Expect = 3e-25
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 3 EANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 62
E V GWG E +++ L + VP+ C A Y + + LC G
Sbjct: 252 EKAEQISTYFVTGWGTT-ENGSSSDVLLQANVPLQPRSACSQA-YR-RAVPLSQLCVGGG 308
Query: 63 EGKRDSCQGDSGGPLQIAVARPGK 86
+ + DSC+GDSGGPLQ G+
Sbjct: 309 DLQ-DSCKGDSGGPLQAPAQYLGE 331
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 229 bits (585), Expect = 4e-75
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEG---VNPKEIKV 153
IVGG L EFP+ + +CGA++ + + +TA HC+ G NP +++
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60
Query: 154 TLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACL 213
GE D I V + I H +F + +NDI+LL++ + F + P L
Sbjct: 61 VAGELDMSVNEG--SEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTF-NDNVAPIAL 117
Query: 214 P---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 258
P G E T + L+KV VP++S+E+C++ Y A I ++M+CA
Sbjct: 118 PEQGHTATGDVIVTGWGT-TSEGGNTPDVLQKVTVPLVSDEDCRAD-YGADEILDSMICA 175
Query: 259 GYAEGKRDSCQGDSGGPL 276
G EG +DSCQGDSGGPL
Sbjct: 176 GVPEGGKDSCQGDSGGPL 193
Score = 118 bits (297), Expect = 4e-32
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 8 GKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRD 67
IV GWG E T + L+KV VP++S+E+C++ Y A I ++M+CAG EG +D
Sbjct: 125 TGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRAD-YGADEILDSMICAGVPEGGKD 183
Query: 68 SCQGDSGGPL 77
SCQGDSGGPL
Sbjct: 184 SCQGDSGGPL 193
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 234 bits (598), Expect = 6e-75
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 47/280 (16%)
Query: 42 CKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPLQIAVARPGKMEVIACGQVERN--Q 99
C+ Y+ N+ A+G S +G+ P+ V CG R
Sbjct: 113 CEETFYTMK--VNDGKYVCEADGFWTSSKGEKSLPVCEPV----------CGLSARTTGG 160
Query: 100 RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGE 157
+I GG K +FPW + G L+ VLTAAH + + + + +G
Sbjct: 161 QIYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGT 218
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSL-SNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
RLS + + + H ++ + F+NDIAL+++ + V I P CLP
Sbjct: 219 LKRLSPHYTQ----AWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI-NSNITPICLPRK 273
Query: 217 SLD-----------------ERKPTANSLRKVEVPILSEEECKSA----GYSASRITNNM 255
+ +R A +L V++PI+ ++C +A Y +T NM
Sbjct: 274 EAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANM 333
Query: 256 LCAGYAEGKRDSCQGDSGGPLQIAVARPGKMEATLSKVVS 295
LCAG G +DSC+GDSGG L + + + +VS
Sbjct: 334 LCAGLESGGKDSCRGDSGGALVFLDSETERW--FVGGIVS 371
Score = 114 bits (286), Expect = 3e-29
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA----GYSASRITNNMLCAGY 61
T IG +GWG A +L V++PI+ ++C +A Y +T NMLCAG
Sbjct: 280 RTDDIGTASGWGLTQRG-FLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGL 338
Query: 62 AEGKRDSCQGDSGGPLQIAVARPGKMEVI 90
G +DSC+GDSGG L + + V
Sbjct: 339 ESGGKDSCRGDSGGALVFLDSETERWFVG 367
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 228 bits (583), Expect = 7e-75
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 29/197 (14%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
+VGG K +FPW L K +CG +++ ++ ++TAAHC+E +I V GEH+
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVE--TGVKITVVAGEHNI 58
Query: 161 LSKNESVPVIIRKVKRAIRHPDF--SLSNFNNDIALLEMESGVDFEAPQIHPACLP---- 214
R V R I H +F +++ +N+DIALLE++ + + P C+
Sbjct: 59 EETEH--TEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVL-NSYVTPICIADKEY 115
Query: 215 ---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAG 259
G + + +A L+ + VP++ C + + ITNNM CAG
Sbjct: 116 TNIFLKFGSGYVSGWGR-VFHKGRSALVLQYLRVPLVDRATCLRS--TKFTITNNMFCAG 172
Query: 260 YAEGKRDSCQGDSGGPL 276
+ EG RDSCQGDSGGP
Sbjct: 173 FHEGGRDSCQGDSGGPH 189
Score = 118 bits (297), Expect = 4e-32
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 65
G V+GWGR+ + +A L+ + VP++ C + + ITNNM CAG+ EG
Sbjct: 120 LKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRS--TKFTITNNMFCAGFHEGG 177
Query: 66 RDSCQGDSGGPL 77
RDSCQGDSGGP
Sbjct: 178 RDSCQGDSGGPH 189
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 228 bits (583), Expect = 9e-75
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 27/196 (13%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
IVGG K E PW A L ++ + +CG T++++ ++LTAAHC+ K KV +G+ +
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLY--QAKRFKVRVGDRN 58
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN--- 216
+ + +V+ I+H F+ ++ DIA+L +++ + F + PACLP
Sbjct: 59 TEQEEG--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITF-RMNVAPACLPERDWA 115
Query: 217 ----------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
E+ + L+ +EVP + CK + S+ IT NM CAGY
Sbjct: 116 ESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLS--SSFIITQNMFCAGY 173
Query: 261 AEGKRDSCQGDSGGPL 276
+ D+CQGDSGGP
Sbjct: 174 DTKQEDACQGDSGGPH 189
Score = 118 bits (297), Expect = 4e-32
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 65
T K GIV+G+GR E+ + L+ +EVP + CK + S+ IT NM CAGY +
Sbjct: 120 MTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLS--SSFIITQNMFCAGYDTKQ 177
Query: 66 RDSCQGDSGGPL 77
D+CQGDSGGP
Sbjct: 178 EDACQGDSGGPH 189
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 224 bits (574), Expect = 2e-73
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEH 158
I GG K +FPW + G L+ VLTAAH + + + + +G
Sbjct: 1 IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL 58
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSL-SNFNNDIALLEMESGVDFEAPQIHPACLPGNS 217
RLS + + H ++ + F+NDIAL+++ + V I P CLP
Sbjct: 59 KRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI-NSNITPICLPRKE 113
Query: 218 LD-----------------ERKPTANSLRKVEVPILSEEECKSA----GYSASRITNNML 256
+ +R A +L V++PI+ ++C +A Y +T NML
Sbjct: 114 AESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANML 173
Query: 257 CAGYAEGKRDSCQGDSGGPLQIAVARPGKMEATLSKVVS 295
CAG G +DSC+GDSGG L + + + +VS
Sbjct: 174 CAGLESGGKDSCRGDSGGALVFLDSETERW--FVGGIVS 210
Score = 115 bits (289), Expect = 7e-31
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA----GYSASRITNNMLCAGY 61
T IG +GWG +R A +L V++PI+ ++C +A Y +T NMLCAG
Sbjct: 119 RTDDIGTASGWGLT-QRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGL 177
Query: 62 AEGKRDSCQGDSGGPLQIAVARPGKMEVI 90
G +DSC+GDSGG L + + V
Sbjct: 178 ESGGKDSCRGDSGGALVFLDSETERWFVG 206
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 224 bits (572), Expect = 4e-73
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEG------VNPKEIKV 153
+VGG E+PW +L G+ CGA+LI+ +++AAHC +P +
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 154 TLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACL 213
LG HD S+ + V R++KR I HP F+ F+ DIALLE+E ++ + + P L
Sbjct: 61 FLGLHD-QSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEY-SSMVRPISL 118
Query: 214 PGNS----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLC 257
P S A L+K E+ ++++ C++ +IT M+C
Sbjct: 119 PDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENL-LP-QQITPRMMC 176
Query: 258 AGYAEGKRDSCQGDSGGPL 276
G+ G DSCQGDSGGPL
Sbjct: 177 VGFLSGGVDSCQGDSGGPL 195
Score = 112 bits (282), Expect = 8e-30
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
GK V GWG A L+K E+ ++++ C++ +IT M+C G+
Sbjct: 122 SHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENL-LP-QQITPRMMCVGF 179
Query: 62 AEGKRDSCQGDSGGPL 77
G DSCQGDSGGPL
Sbjct: 180 LSGGVDSCQGDSGGPL 195
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 223 bits (571), Expect = 5e-73
Identities = 64/193 (33%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 159
IVGG + E+PW A+L G CGATLI +++AAHC NP + G
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTI 60
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS-- 217
+ + R ++R I H + + + DI+L E+ S V + +H CLP S
Sbjct: 61 KP------SKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPY-TNAVHRVCLPDASYE 113
Query: 218 --------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 263
L + N LR+ +V ++ C IT MLCAG EG
Sbjct: 114 FQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEG 173
Query: 264 KRDSCQGDSGGPL 276
K D+CQGDSGGPL
Sbjct: 174 KTDACQGDSGGPL 186
Score = 116 bits (292), Expect = 2e-31
Identities = 30/76 (39%), Positives = 38/76 (50%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
G + V G+G L + N LR+ +V ++ C IT MLCAG
Sbjct: 111 SYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGS 170
Query: 62 AEGKRDSCQGDSGGPL 77
EGK D+CQGDSGGPL
Sbjct: 171 LEGKTDACQGDSGGPL 186
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 223 bits (571), Expect = 5e-73
Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 26/196 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GG + + + PW + K +CG +++ V+TAA C++G P +I + G R
Sbjct: 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYR 60
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+K SV + I + N+ A++E E + + LP
Sbjct: 61 TTKGTSVMA------KKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDP 114
Query: 215 -----------GNSLDERKPTANSLRKVEVPILSEEECKSA---GYSASRITNNMLCAGY 260
G++ + + L + ++ + C+ + I + + CAG
Sbjct: 115 EPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGG 174
Query: 261 AEGKRDSCQGDSGGPL 276
+ GD+G P
Sbjct: 175 EYDETYIGYGDAGDPA 190
Score = 108 bits (273), Expect = 1e-28
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 2 DEANYTGKIGIVAGWGRLDER-KPTANSLRKVEVPILSEEECKSA---GYSASRITNNML 57
+V+GWG + + + L + ++ + C+ + I + +
Sbjct: 111 LYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVF 170
Query: 58 CAGYAEGKRDSCQGDSGGPL 77
CAG + GD+G P
Sbjct: 171 CAGGEYDETYIGYGDAGDPA 190
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 223 bits (570), Expect = 5e-73
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 26/193 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG +FP+I ++++ G +CG +L+ VLTAAHC+ G ++ G R
Sbjct: 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
S I + HP + S NND+A+L++ + + I A L
Sbjct: 61 TS-----GGITSSLSSVRVHPSY--SGNNNDLAILKLSTSIPSGG-NIGYARLAASGSDP 112
Query: 215 -----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 263
G + + T +L KV VPI+S C++ Y S ITN M CAG + G
Sbjct: 113 VAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQ-YGTSAITNQMFCAGVSSG 171
Query: 264 KRDSCQGDSGGPL 276
+DSCQGDSGGP+
Sbjct: 172 GKDSCQGDSGGPI 184
Score = 114 bits (287), Expect = 1e-30
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 2 DEANYTGKIGIVAGWGRLDER-KPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAG 60
G VAGWG E T +L KV VPI+S C++ Y S ITN M CAG
Sbjct: 109 GSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQ-YGTSAITNQMFCAG 167
Query: 61 YAEGKRDSCQGDSGGPL 77
+ G +DSCQGDSGGP+
Sbjct: 168 VSSGGKDSCQGDSGGPI 184
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 223 bits (570), Expect = 5e-73
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 159
+VGG EFP++ L CG L A+ VLTAAHC+ G N I T G D
Sbjct: 1 VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVD 56
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS-- 217
S + + + + ++ P F+ + D AL+++ ++ P +
Sbjct: 57 LQSSSA----VKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ------PTLKIATTTA 106
Query: 218 -------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
E L K VP +S+ C+S+ S + N M+CAGY +
Sbjct: 107 YNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSS-SSFILVANEMICAGYDTKQ 165
Query: 265 RDSCQGDSGGPL 276
D+CQGDSGGP+
Sbjct: 166 EDTCQGDSGGPM 177
Score = 121 bits (305), Expect = 2e-33
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 65
Y VAGWG E L K VP +S+ C+S+ S + N M+CAGY +
Sbjct: 107 YNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSS-SSFILVANEMICAGYDTKQ 165
Query: 66 RDSCQGDSGGPL 77
D+CQGDSGGP+
Sbjct: 166 EDTCQGDSGGPM 177
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 224 bits (573), Expect = 1e-72
Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 38/223 (17%)
Query: 92 CGQVERNQRIVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEG- 145
CG +I+ G+ T EFPW A + K +F CG +LI R+++TAAHC+ G
Sbjct: 14 CGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGR 73
Query: 146 ---VNPKEIKVTLGEHDRLSKNE---------SVPVIIRKVKRAIRHPDFSLSNFN--ND 191
V KV LGE + + + I ++ I+HPD+ + + +D
Sbjct: 74 VLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHD 133
Query: 192 IALLEMESGVDFEAPQIHPACLPGNSLD---------------ERKPTANSLRKVEVPIL 236
IAL+ + V+F I P CLP + + E + +K+ VP++
Sbjct: 134 IALIRLNRQVEF-TNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVV 192
Query: 237 SEEECKSA-GYSASRITNNMLCAGYAEGKRDSCQGDSGGPLQI 278
E+C G + R+ ++ LCAG + K DSC GDSGGPL
Sbjct: 193 HAEQCAKTFGAAGVRVRSSQLCAGGEKAK-DSCGGDSGGPLLA 234
Score = 108 bits (273), Expect = 3e-28
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA-GYSASRITNNMLCAG 60
+E G+ V GWGR E + +K+ VP++ E+C G + R+ ++ LCAG
Sbjct: 158 NEEVQVGQRLTVVGWGRT-ETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAG 216
Query: 61 YAEGKRDSCQGDSGGPLQI 79
+ K DSC GDSGGPL
Sbjct: 217 GEKAK-DSCGGDSGGPLLA 234
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 222 bits (567), Expect = 3e-72
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 101 IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEG-------------- 145
I G + PWIA L+ G+ +CG +L+ ++TAAHC+
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 146 VNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEA 205
++P + K+ LG+H RL +E VK HP + + F ND+AL+E+
Sbjct: 61 LSPSDFKIILGKHWRLRSDE--NEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVL-N 117
Query: 206 PQIHPACLPGNSLDERK-------------PTANSLRKVEVPILSEEECKSA-GYSASRI 251
+ P CLP E +L ++E+PI+ C+ A ++
Sbjct: 118 AFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKV 177
Query: 252 TNNMLCAGYAEGKRDSCQGDSGGPL 276
T +M+CAG EG +D+C GDSGGP+
Sbjct: 178 TRDMICAGEKEGGKDACAGDSGGPM 202
Score = 112 bits (281), Expect = 1e-29
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 7 TGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA-GYSASRITNNMLCAGYAEGK 65
G + IV+GWG+ + +L ++E+PI+ C+ A ++T +M+CAG EG
Sbjct: 132 EGAMVIVSGWGKQFL-QRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGG 190
Query: 66 RDSCQGDSGGPL 77
+D+C GDSGGP+
Sbjct: 191 KDACAGDSGGPM 202
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 221 bits (566), Expect = 3e-72
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 101 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 156
IVGG + E+PW +L + CG +LI + VLTAAHC +G+ ++ G
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSG 60
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
+ + ++K I H ++ +S N+DIAL+++++ +++ P LP
Sbjct: 61 ILELSDITK--DTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY-TEFQKPISLPSK 117
Query: 217 S----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
E+ N L+KV +P+++ EEC+ Y +IT M+CAGY
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKR-YQDYKITQRMVCAGY 176
Query: 261 AEGKRDSCQGDSGGPL 276
EG +D+C+GDSGGPL
Sbjct: 177 KEGGKDACKGDSGGPL 192
Score = 115 bits (290), Expect = 5e-31
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
+ + V GWG E+ N L+KV +P+++ EEC+ Y +IT M+CAGY
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKR-YQDYKITQRMVCAGY 176
Query: 62 AEGKRDSCQGDSGGPL 77
EG +D+C+GDSGGPL
Sbjct: 177 KEGGKDACKGDSGGPL 192
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 226 bits (577), Expect = 4e-72
Identities = 64/211 (30%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 91 ACGQ-VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VN 147
CG+ RIVGG T L +PW +L G CG +L++ VLTAAHC
Sbjct: 107 DCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRV 166
Query: 148 PKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSL------SNFNNDIALLEMESGV 201
+V G + S + + V+ + H + +NDIAL+ + S +
Sbjct: 167 LSRWRVFAGAVAQASPHG----LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPL 222
Query: 202 DFEAPQIHPACLPGNS----------------LDERKPTANSLRKVEVPILSEEECKSAG 245
I P CLP A L++ VPI+S + C A
Sbjct: 223 PL-TEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGAD 281
Query: 246 YSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
+ ++I M CAGY EG D+CQGDSGGP
Sbjct: 282 FYGNQIKPKMFCAGYPEGGIDACQGDSGGPF 312
Score = 116 bits (292), Expect = 3e-30
Identities = 33/76 (43%), Positives = 42/76 (55%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
+A GKI V GWG A L++ VPI+S + C A + ++I M CAGY
Sbjct: 237 GQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY 296
Query: 62 AEGKRDSCQGDSGGPL 77
EG D+CQGDSGGP
Sbjct: 297 PEGGIDACQGDSGGPF 312
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 220 bits (564), Expect = 6e-72
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 157
++GG EFPW + ++ + CGA+L++ L+A+HC++GV P I+V G
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGL 60
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFS--LSNFNNDIALLEMESGVDFEAPQIHPACLPG 215
S V H ++ ++++NDIA+L + + + I A LP
Sbjct: 61 WQ-QSDTS--GTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL-GGNIQAAVLPA 116
Query: 216 NS----------------LDERKPTANSLRKVEVPILSEEECKSA--GYSASRITNNMLC 257
N+ D + L+K +P+++ +C +A G + I +N +C
Sbjct: 117 NNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHIC 176
Query: 258 AGYAEGKRDSCQGDSGGPL 276
G +C GDSGGPL
Sbjct: 177 VQDPAGNTGACNGDSGGPL 195
Score = 117 bits (296), Expect = 7e-32
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA--GYSASRITNNMLCA 59
+ +Y G +++GWGR D + L+K +P+++ +C +A G + I +N +C
Sbjct: 118 NNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICV 177
Query: 60 GYAEGKRDSCQGDSGGPL 77
G +C GDSGGPL
Sbjct: 178 QDPAGNTGACNGDSGGPL 195
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 221 bits (565), Expect = 2e-71
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 91 ACGQVERNQ-----RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 145
ACG+ + + RI+GG+ + PW+AA+ G +C +L+ V++AAHC
Sbjct: 21 ACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSH 79
Query: 146 -VNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSN-FNNDIALLEMESGVDF 203
+ V LG+H + +++ I + +S+ N ++D+ L+ ++ D
Sbjct: 80 SPPRDSVSVVLGQHFFNRTTD--VTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137
Query: 204 EA---PQIHPACLP-----------------GNSLDERKPTANSLRKVEVPILSEEECKS 243
A + P CLP G+ + ++SLR+ VP++++ +C S
Sbjct: 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSS 197
Query: 244 AGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
+ I+ NMLCAGY + K D+CQGDSGGPL
Sbjct: 198 PEVYGADISPNMLCAGYFDCKSDACQGDSGGPL 230
Score = 110 bits (276), Expect = 1e-28
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+AGWG LDE ++SLR+ VP++++ +C S + I+ NMLCAGY + K D+CQG
Sbjct: 165 IAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQG 224
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 225 DSGGPL 230
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 221 bits (564), Expect = 3e-71
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 41/222 (18%)
Query: 92 CGQVERNQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------ 143
+ + RIV G+ ++ PW L +K + CGA+LI+ R VLTAAHC+
Sbjct: 22 LLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWD 81
Query: 144 EGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS-NFNNDIALLEMESGVD 202
+ ++ V +G+H R ++ E I +++ HP ++ N + DIAL++++ V
Sbjct: 82 KNFTENDLLVRIGKHSR-TRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA 140
Query: 203 FEAPQIHPACLP-------------------------GNSLDERKPTANSLRKVEVPILS 237
F + IHP CLP + + K + L+ V +PI+
Sbjct: 141 F-SDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVE 199
Query: 238 EEECKSAGYSASRITNNMLCAGYAE---GKRDSCQGDSGGPL 276
CK + + RIT+NM CAGY + D+C+GDSGGP
Sbjct: 200 RPVCKDS--TRIRITDNMFCAGYKPDEGKRGDACEGDSGGPF 239
Score = 105 bits (263), Expect = 1e-26
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 6 YTGKIGIVAGWGRLDERK------PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 59
G G V GWG L E + L+ V +PI+ CK + + RIT+NM CA
Sbjct: 161 QAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDS--TRIRITDNMFCA 218
Query: 60 GYAE---GKRDSCQGDSGGPL 77
GY + D+C+GDSGGP
Sbjct: 219 GYKPDEGKRGDACEGDSGGPF 239
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 218 bits (558), Expect = 5e-71
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 100 RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEH 158
I+GG H P++A++ G CG LI + VLTAAHC + V LG H
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAH 61
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP---- 214
LSKNE+ ++K+ I + +NDI L+++++ + +
Sbjct: 62 S-LSKNEA-SKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLN-KHVKMLHIRSKTS 118
Query: 215 ------------GNSLDERKPTANSLRKVEVPILSEEECKSAGY--SASRITNNMLCAGY 260
G + + +++LR+V V +LS + C S Y IT +M+CAG
Sbjct: 119 LRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGD 178
Query: 261 AEGKRDSCQGDSGGPL 276
A+G++DSC+GD+GGPL
Sbjct: 179 AKGQKDSCKGDAGGPL 194
Score = 103 bits (259), Expect = 2e-26
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGY--SASRITNNMLCAGYAEGKRDSC 69
V GWG D +++LR+V V +LS + C S Y IT +M+CAG A+G++DSC
Sbjct: 127 VTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSC 186
Query: 70 QGDSGGPL 77
+GD+GGPL
Sbjct: 187 KGDAGGPL 194
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 218 bits (557), Expect = 5e-71
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GG + H P++A++ G CG L+A++ VL+AAHC+E +++V LG H
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS--- 217
LS+ E + V RA+ HPD ++D+ LL++ P + P
Sbjct: 60 LSQPEP-SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATL-GPAVRPLPWQRVDRDV 117
Query: 218 -------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
++ +SL+ V +P+L C + IT ++CA +
Sbjct: 118 APGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNR 175
Query: 265 RDSCQGDSGGPL 276
RDSC+GD+GGPL
Sbjct: 176 RDSCKGDAGGPL 187
Score = 106 bits (268), Expect = 6e-28
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWG ++ +SL+ V +P+L C + IT ++CA +RDSC+GD
Sbjct: 125 VAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNRRDSCKGD 182
Query: 73 SGGPL 77
+GGPL
Sbjct: 183 AGGPL 187
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 223 bits (569), Expect = 1e-70
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 92 CGQVERNQ---RIVGG-NVTKLHEFPWIAALTKKG--------KFYCGATLIAKRHVLTA 139
CG +I G N + EFPW+ A+ K + CG +LIA VLT
Sbjct: 118 CGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTG 177
Query: 140 AHCIEGV--NPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEM 197
AHC+ N IK+ GE D L++ E +P RK+++ I H +F+ ND+ALL +
Sbjct: 178 AHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLL 237
Query: 198 ESGVDFEAPQIHPACLP--GNSLDERK---------------PTANSLRKVEVPILSEEE 240
+ + A I CLP D + +N L+K+++P + ++
Sbjct: 238 DRPLVQ-ADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDK 296
Query: 241 C-----KSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
C + + +CAG +GK D+C GD G PL
Sbjct: 297 CQADLRNTRLGLKFVLDQTFVCAGGEQGK-DTCTGDGGSPL 336
Score = 99.1 bits (247), Expect = 8e-24
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 4 ANYTGKIGIVAGWGRLDE--RKPTANSLRKVEVPILSEEEC-----KSAGYSASRITNNM 56
+ +GWG+ + R +N L+K+++P + ++C + +
Sbjct: 257 QIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTF 316
Query: 57 LCAGYAEGKRDSCQGDSGGPL 77
+CAG +GK D+C GD G PL
Sbjct: 317 VCAGGEQGK-DTCTGDGGSPL 336
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 217 bits (555), Expect = 1e-70
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 156
IVGG + E+PW L + CG ++I + +LTAAHC GV +PK ++V G
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
++ E V+ I H + ++ DIALL++E+ V++ P LP
Sbjct: 61 ILNQSEIKE--DTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY-TDSQRPISLPSK 117
Query: 217 S----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
R N+L+K ++P+++ EEC+ Y +IT+ M+CAGY
Sbjct: 118 GERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR-YRGHKITHKMICAGY 176
Query: 261 AEGKRDSCQGDSGGPL 276
EG +D+C+GDSGGPL
Sbjct: 177 REGGKDACKGDSGGPL 192
Score = 113 bits (285), Expect = 2e-30
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
E N V GWG R N+L+K ++P+++ EEC+ Y +IT+ M+CAGY
Sbjct: 118 GERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR-YRGHKITHKMICAGY 176
Query: 62 AEGKRDSCQGDSGGPL 77
EG +D+C+GDSGGPL
Sbjct: 177 REGGKDACKGDSGGPL 192
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 217 bits (556), Expect = 2e-70
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 92 CG----QVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCI 143
CG Q + R+VGG H +PW +L + CG TLI HVLTAAHCI
Sbjct: 1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 144 EGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDF 203
N +V LG+++ ++E+ + V H ++ NDIAL+++ V+
Sbjct: 61 S--NTLTYRVALGKNNLEVEDEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117
Query: 204 EAPQIHPACLPGNS----------------LDERKPTANSLRKVEVPILSEEECKSAGYS 247
I ACLP L P A L++ P++ C +
Sbjct: 118 -GDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWW 176
Query: 248 ASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
+ + M+CAG +G +C GDSGGPL
Sbjct: 177 GTTVKETMVCAGG-DGVISACNGDSGGPL 204
Score = 107 bits (270), Expect = 5e-28
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
V GWGRL P A L++ P++ C + + + M+CAG +G +C GD
Sbjct: 141 VTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG-DGVISACNGD 199
Query: 73 SGGPL 77
SGGPL
Sbjct: 200 SGGPL 204
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 220 bits (562), Expect = 2e-70
Identities = 71/244 (29%), Positives = 104/244 (42%), Gaps = 45/244 (18%)
Query: 62 AEGKRDSCQGDSGGPLQIAVARPGKMEVIACGQ----VERNQRIVGGNVTKLHEFPWIAA 117
A+G + Q P + V CG+ VE+ QRI+GG K+ FPW
Sbjct: 57 AQGIWKNEQKGEKIPRCLPV----------CGKPVNPVEQRQRIIGGQKAKMGNFPWQVF 106
Query: 118 LTKKGKFYCGATLIAKRHVLTAAHCIEG-----VNPKEIKVTLGEHDRLSKNESVPVIIR 172
G G L+ R +LTAAH + + + V LG + +
Sbjct: 107 TNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGN---H 161
Query: 173 KVKRAIRHPDFSLS---NFNNDIALLEMESGVDFEAPQIHPACLPGNSLD---------- 219
++R HPD+ NF DIALLE+E+ V P + P CLP N
Sbjct: 162 PIRRVSVHPDYRQDESYNFEGDIALLELENSVTL-GPNLLPICLPDNDTFYDLGLMGYVS 220
Query: 220 ----ERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNMLCAGYAEGKRDSCQGDS 272
+ A+ LR V +P+ + + C++ +R + NM CAG+ K+D+CQGDS
Sbjct: 221 GFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDS 280
Query: 273 GGPL 276
GG
Sbjct: 281 GGVF 284
Score = 111 bits (280), Expect = 8e-29
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNMLC 58
D G +G V+G+G ++E+ + LR V +P+ + + C++ +R + NM C
Sbjct: 208 DTFYDLGLMGYVSGFGVMEEKIA--HDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFC 265
Query: 59 AGYAEGKRDSCQGDSGGPLQIAVARPGKMEV-------IACGQVERNQRIVGG---NVTK 108
AG+ K+D+CQGDSGG + + I C + G V
Sbjct: 266 AGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GY-----GFYTKVLN 318
Query: 109 LHEFPWIAALTKK 121
WI ++
Sbjct: 319 YV--DWIKKEMEE 329
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 218 bits (557), Expect = 2e-70
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 91 ACGQ--VERNQRIVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCI 143
CGQ + +I+GG T + PW AA+ ++ + + CG +L++ V++A HC
Sbjct: 12 QCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCF 71
Query: 144 EG-VNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNF--NNDIALLEMESG 200
++ V LG S + + +V+ I H D+S +NDIALL++ S
Sbjct: 72 IDYPKKEDYIVYLGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSK 129
Query: 201 VDFEA---PQIHPACLP-----------------GNSLDERKPTANSLRKVEVPILSEEE 240
A I CLP G L+ V ++S E
Sbjct: 130 EGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRE 189
Query: 241 CKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
C+ Y S +T MLCA + K DSCQGDSGGPL
Sbjct: 190 CQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPL 225
Score = 108 bits (273), Expect = 3e-28
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+ G+G+ + L+ V ++S EC+ Y S +T MLCA + K DSCQG
Sbjct: 160 ITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQG 219
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 220 DSGGPL 225
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 217 bits (555), Expect = 2e-70
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
++ G +T+ + PW L K K CGA LI VLTAAHC++ K++ V LGE+D
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD--ESKKLLVRLGEYD 58
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSLD 219
+ + +K HP++S S +NDIALL + + I P CLP + L
Sbjct: 59 LRRWEK--WELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATL-SQTIVPICLPDSGLA 115
Query: 220 ER-------------------------KPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
ER + L +++P++ EC S + ++ N
Sbjct: 116 ERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEV-MS-NMVSEN 173
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
MLCAG ++D+C+GDSGGP+
Sbjct: 174 MLCAGILGDRQDACEGDSGGPM 195
Score = 109 bits (275), Expect = 8e-29
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 6 YTGKIGIVAGWGRLDERKPTANS-----LRKVEVPILSEEECKSAGYSASRITNNMLCAG 60
G+ +V GWG R+ A L +++P++ EC S + ++ NMLCAG
Sbjct: 121 QAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEV-MS-NMVSENMLCAG 178
Query: 61 YAEGKRDSCQGDSGGPL 77
++D+C+GDSGGP+
Sbjct: 179 ILGDRQDACEGDSGGPM 195
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 217 bits (554), Expect = 3e-70
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHD 159
I+GG+ + PW+AA+ G +C +L+ V++AAHC + V LG+H
Sbjct: 1 IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHF 59
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSN-FNNDIALLEMESGVDFEA---PQIHPACLP- 214
+ +++ I + +S+ N ++D+ L+ ++ D A + P CLP
Sbjct: 60 FNRTTD--VTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPE 117
Query: 215 ----------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 258
G+ + ++SLR+ VP++++ +C S + I+ NMLCA
Sbjct: 118 PGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCA 177
Query: 259 GYAEGKRDSCQGDSGGPL 276
GY + K D+CQGDSGGPL
Sbjct: 178 GYFDCKSDACQGDSGGPL 195
Score = 110 bits (277), Expect = 5e-29
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+AGWG LDE ++SLR+ VP++++ +C S + I+ NMLCAGY + K D+CQG
Sbjct: 130 IAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQG 189
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 190 DSGGPL 195
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 216 bits (551), Expect = 1e-69
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 41/213 (19%)
Query: 101 IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEG------VNPKEIK 152
IV G+ ++ PW L +K + CGA+LI+ R VLTAAHC+ ++
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 153 VTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS-NFNNDIALLEMESGVDFEAPQIHPA 211
V +G+H R ++ E I +++ HP ++ N + DIAL++++ V F + IHP
Sbjct: 61 VRIGKHSR-TRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAF-SDYIHPV 118
Query: 212 CLP-------------------------GNSLDERKPTANSLRKVEVPILSEEECKSAGY 246
CLP + + K + L+ V +PI+ CK
Sbjct: 119 CLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD--S 176
Query: 247 SASRITNNMLCAGYAE---GKRDSCQGDSGGPL 276
+ RIT+NM CAGY + D+C+GDSGGP
Sbjct: 177 TRIRITDNMFCAGYKPDEGKRGDACEGDSGGPF 209
Score = 106 bits (266), Expect = 2e-27
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 6 YTGKIGIVAGWGRLDERK------PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 59
G G V GWG L E + L+ V +PI+ CK + RIT+NM CA
Sbjct: 131 QAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD--STRIRITDNMFCA 188
Query: 60 GYAE---GKRDSCQGDSGGPL 77
GY + D+C+GDSGGP
Sbjct: 189 GYKPDEGKRGDACEGDSGGPF 209
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 214 bits (548), Expect = 2e-69
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GG H P++A+L + G CG L+ + VLTAAHC+ ++++ LG H
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQ-RMAQLRLVLGLHT- 58
Query: 161 LSKNESVPVIIRKVKRAIRHPDF-SLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS-- 217
L + +K AI+HP + + ND+ALL+++ V + I P LP
Sbjct: 59 LDSPG----LTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKP-SRTIRPLALPSKRQV 113
Query: 218 --------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 263
+ + LR++++ +L C ++ + ++ +M+C
Sbjct: 114 VAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSK 173
Query: 264 KRDSCQGDSGGPL 276
+ C+GDSGGPL
Sbjct: 174 DQAPCKGDSGGPL 186
Score = 112 bits (283), Expect = 5e-30
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+AGWG + + LR++++ +L C ++ + ++ +M+C + C+GD
Sbjct: 122 MAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGD 181
Query: 73 SGGPL 77
SGGPL
Sbjct: 182 SGGPL 186
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 219 bits (560), Expect = 2e-69
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 45/244 (18%)
Query: 62 AEGKRDSCQGDSGGPLQIAVARPGKMEVIACGQ----VERNQRIVGGNVTKLHEFPWIAA 117
A+G + Q P + V CG+ VE+ Q+I+GG K+ FPW
Sbjct: 125 AQGIWKNEQKGEKIPRCLPV----------CGKPVNPVEQRQQIIGGQKAKMGNFPWQVF 174
Query: 118 LTKKGKFYCGATLIAKRHVLTAAHCIEG-----VNPKEIKVTLGEHDRLSKNESVPVIIR 172
G G L+ R +LTAAH + + + V LG + E + +
Sbjct: 175 TNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNV---EELMKLGNH 229
Query: 173 KVKRAIRHPDFSLS---NFNNDIALLEMESGVDFEAPQIHPACLPGNSLD---------- 219
++R HPD+ NF DIALLE+E+ V P + P CLP N
Sbjct: 230 PIRRVSVHPDYRQDESYNFEGDIALLELENSVTL-GPNLLPICLPDNDTFYDLGLMGYVS 288
Query: 220 ----ERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNMLCAGYAEGKRDSCQGDS 272
+ A+ LR V +P+ + + C++ +R + NM CAG+ K+D+CQGDS
Sbjct: 289 GFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDS 348
Query: 273 GGPL 276
GG
Sbjct: 349 GGVF 352
Score = 111 bits (279), Expect = 3e-28
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNMLC 58
D G +G V+G+G ++E+ A+ LR V +P+ + + C++ +R + NM C
Sbjct: 276 DTFYDLGLMGYVSGFGVMEEK--IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFC 333
Query: 59 AGYAEGKRDSCQGDSGGPL 77
AG+ K+D+CQGDSGG
Sbjct: 334 AGHPSLKQDACQGDSGGVF 352
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 214 bits (547), Expect = 3e-69
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-----VNPKEIKVTL 155
I+GG K+ FPW G G L+ R +LTAAH + + + V L
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 156 GEHDRLSKNESVPVIIRKVKRAIRHPDFSLS---NFNNDIALLEMESGVDFEAPQIHPAC 212
G + E + + ++R HPD+ NF DIALLE+E+ V P + P C
Sbjct: 59 GHTNV---EELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTL-GPNLLPIC 114
Query: 213 LPGNSLD--------------ERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNM 255
LP N + A+ LR V +P+ + + C++ +R + NM
Sbjct: 115 LPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNM 174
Query: 256 LCAGYAEGKRDSCQGDSGGPL 276
CAG+ K+D+CQGDSGG
Sbjct: 175 FCAGHPSLKQDACQGDSGGVF 195
Score = 113 bits (284), Expect = 4e-30
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASR---ITNNMLC 58
D G +G V+G+G ++E+ + LR V +P+ + + C++ +R + NM C
Sbjct: 119 DTFYDLGLMGYVSGFGVMEEKIA--HDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFC 176
Query: 59 AGYAEGKRDSCQGDSGGPL 77
AG+ K+D+CQGDSGG
Sbjct: 177 AGHPSLKQDACQGDSGGVF 195
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 214 bits (547), Expect = 4e-69
Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 35/209 (16%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGK------FYCGATLIAKRHVLTAAHCIEG-VNPKEIKV 153
I GG + PW AA+ K + F CG LI+ +L+AAHC + P + V
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60
Query: 154 TLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEA---PQIHP 210
LG R+ E +V++ I H +F ++NDIALL+++S A +
Sbjct: 61 ILGRTYRVVPGE--EEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRT 118
Query: 211 ACLP-----------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITN 253
CLP G + L++ V + C S +T+
Sbjct: 119 VCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTD 178
Query: 254 NMLCAGYAEG------KRDSCQGDSGGPL 276
NMLCAG D+CQGDSGGPL
Sbjct: 179 NMLCAGDTRSGGPQANLHDACQGDSGGPL 207
Score = 102 bits (256), Expect = 5e-26
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 6 YTGKIGIVAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 64
++G+G+ + P + L++ V + C S +T+NMLCAG
Sbjct: 129 PDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188
Query: 65 ------KRDSCQGDSGGPL 77
D+CQGDSGGPL
Sbjct: 189 GGPQANLHDACQGDSGGPL 207
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 212 bits (543), Expect = 6e-69
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 26/193 (13%)
Query: 103 GGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
GG T + + PW A+ + CG ++++ VLTAAHC+ P+ I + +
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTN 61
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS-- 217
+ + NDIA+LE+ + + + PA LP
Sbjct: 62 LWEDPGKS----DPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFR 117
Query: 218 --------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 263
P + L+ ++ ++ +EC++ Y ++ + CA
Sbjct: 118 PKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTK-YGPIFLSLQVFCAQK--V 174
Query: 264 KRDSCQGDSGGPL 276
GD+G P
Sbjct: 175 GVSLESGDAGDPT 187
Score = 111 bits (279), Expect = 2e-29
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
+ TG +V+G+G P + L+ ++ ++ +EC++ Y ++ + CA
Sbjct: 115 EFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTK-YGPIFLSLQVFCAQK 173
Query: 62 AEGKRDSCQGDSGGPL 77
GD+G P
Sbjct: 174 --VGVSLESGDAGDPT 187
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 212 bits (543), Expect = 7e-69
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 23/192 (11%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
IVGG K E PW A L ++ + +CG T++++ ++LTAAHC+ K KV +G+ +
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLY--QAKRFKVRVGDRN 58
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP----- 214
+ + +V+ I+H F+ ++ DIA+L +++ + F + PA LP
Sbjct: 59 TEQEEGGE--AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFR-MNVAPASLPTAPPA 115
Query: 215 ----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
GN+ + L+ ++ P+LS+ +C+++ Y +IT+NM C G+ EG
Sbjct: 116 TGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEAS-YP-GKITSNMFCVGFLEGG 173
Query: 265 RDSCQGDSGGPL 276
+DSCQGDSGGP+
Sbjct: 174 KDSCQGDSGGPV 185
Score = 104 bits (262), Expect = 4e-27
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 7 TGKIGIVAGWGRLDERKPT-ANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 65
TG +++GWG + L+ ++ P+LS+ +C+++ Y +IT+NM C G+ EG
Sbjct: 116 TGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEAS-YP-GKITSNMFCVGFLEGG 173
Query: 66 RDSCQGDSGGPL 77
+DSCQGDSGGP+
Sbjct: 174 KDSCQGDSGGPV 185
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 223 bits (571), Expect = 1e-68
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 24/200 (12%)
Query: 97 RNQRIVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGV-NPKEIK 152
RIVGG + E+PW L + CG ++I + +LTAAHC GV +PK ++
Sbjct: 384 IKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILR 443
Query: 153 VTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPAC 212
V G ++ E V+ I H + ++ DIALL++E+ V++ P C
Sbjct: 444 VYSGILNQSEIKE--DTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY-TDSQRPIC 500
Query: 213 LPGNS----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNML 256
LP R N+L+K ++P+++ EEC+ Y +IT+ M+
Sbjct: 501 LPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR-YRGHKITHKMI 559
Query: 257 CAGYAEGKRDSCQGDSGGPL 276
CAGY EG +D+C+GDSGGPL
Sbjct: 560 CAGYREGGKDACKGDSGGPL 579
Score = 115 bits (289), Expect = 6e-29
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 2 DEANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 61
+ N V GWG R N+L+K ++P+++ EEC+ Y +IT+ M+CAGY
Sbjct: 505 GDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR-YRGHKITHKMICAGY 563
Query: 62 AEGKRDSCQGDSGGPL 77
EG +D+C+GDSGGPL
Sbjct: 564 REGGKDACKGDSGGPL 579
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 214 bits (546), Expect = 2e-68
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 101 IVGGNVTKLHEFPWIAAL------TKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKV 153
I+GG +PW+ +L + CG +L+ + +LTAAHC + ++
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60
Query: 154 TLGEHDRLSKNES---VPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHP 210
G + P+ R V++ I H +S S+ NDIAL+++ V I P
Sbjct: 61 IFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTC-GHFIGP 119
Query: 211 ACLP------------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRIT 252
CLP G + + T+ L++ V ++ C S + RI
Sbjct: 120 GCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIR 179
Query: 253 NNMLCAGYAEGKRDSCQGDSGGPL 276
+ +CAGY EGK D+CQGDSGGPL
Sbjct: 180 STNVCAGYPEGKIDTCQGDSGGPL 203
Score = 110 bits (277), Expect = 1e-28
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
VAGWG L E T+ L++ V ++ C S + RI + +CAGY EGK D+CQG
Sbjct: 138 VAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQG 197
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 198 DSGGPL 203
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 212 bits (541), Expect = 3e-68
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHD 159
I GG+ ++PW ++T +G CG +L++++ VL+AAHC + + +V LG H
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSL- 218
S +E + +K I HP + DIALL++ + F + I P LP
Sbjct: 61 LDSYSE--DAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITF-SRYIRPISLPAAQAS 117
Query: 219 -----------------DERKPTANSLRKVEVPILSEEECKSA------GYSASRITNNM 255
T L+++EVP++S E C S + +M
Sbjct: 118 FPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDM 177
Query: 256 LCAGYAEGKRDSCQGDSGGPL 276
+CAGY EG +D+CQGDSGGPL
Sbjct: 178 VCAGYVEGGKDACQGDSGGPL 198
Score = 103 bits (258), Expect = 4e-26
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 13 VAGWGRLDER--KPTANSLRKVEVPILSEEECKSA------GYSASRITNNMLCAGYAEG 64
V GWG + T L+++EVP++S E C S + +M+CAGY EG
Sbjct: 126 VTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEG 185
Query: 65 KRDSCQGDSGGPL 77
+D+CQGDSGGPL
Sbjct: 186 GKDACQGDSGGPL 198
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 211 bits (539), Expect = 4e-68
Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEG-VNPKEIKVT 154
I+GG T + PW AA+ ++ + + CG +LI+ V++A HC ++ V
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 155 LGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNF--NNDIALLEMESGVDFEA---PQIH 209
LG S + + +V+ I H D+S +NDIALL++ S A I
Sbjct: 61 LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 210 PACLP-----------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRIT 252
LP G L+ V ++S EC+ Y S +T
Sbjct: 119 TISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVT 178
Query: 253 NNMLCAGYAEGKRDSCQGDSGGPL 276
MLCA + K DSCQGDSGGPL
Sbjct: 179 TKMLCAADPQWKTDSCQGDSGGPL 202
Score = 109 bits (274), Expect = 1e-28
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 13 VAGWGRLDERKP-TANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+ G+G+ + L+ V ++S EC+ Y S +T MLCA + K DSCQG
Sbjct: 137 ITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQG 196
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 197 DSGGPL 202
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 217 bits (553), Expect = 6e-68
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 41/222 (18%)
Query: 92 CGQVERNQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIE----- 144
+ + RIV G+ ++ PW L +K + CGA+LI+ R VLTAAHC+
Sbjct: 157 LLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWD 216
Query: 145 -GVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS-NFNNDIALLEMESGVD 202
++ V +G+H R ++ E I +++ HP ++ N + DIAL++++ V
Sbjct: 217 KNFTENDLLVRIGKHSR-TRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA 275
Query: 203 FEAPQIHPACLP-------------------------GNSLDERKPTANSLRKVEVPILS 237
F + IHP CLP + + K + L+ V +PI+
Sbjct: 276 F-SDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVE 334
Query: 238 EEECKSAGYSASRITNNMLCAGYAE---GKRDSCQGDSGGPL 276
CK + RIT+NM CAGY + D+C+GDSGGP
Sbjct: 335 RPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPF 374
Score = 103 bits (257), Expect = 4e-25
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 6 YTGKIGIVAGWGRLDERK------PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 59
G G V GWG L E + L+ V +PI+ CK + RIT+NM CA
Sbjct: 296 QAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD--STRIRITDNMFCA 353
Query: 60 GYAE---GKRDSCQGDSGGPL 77
GY + D+C+GDSGGP
Sbjct: 354 GYKPDEGKRGDACEGDSGGPF 374
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 208 bits (531), Expect = 5e-67
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 29/192 (15%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + +FP++A++ +G+ +CG LI R V+TAA C + NP V LG +D
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYD- 59
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS--- 217
L + E ++ + ND+ LL+++ + + LP +
Sbjct: 60 LRRRER-QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANL-TSSVTILPLPLQNATV 117
Query: 218 -------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
+ R V V + E++C+ N +C G +
Sbjct: 118 EAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP----------NNVCTGVLTRR 167
Query: 265 RDSCQGDSGGPL 276
C GD G PL
Sbjct: 168 GGICNGDGGTPL 179
Score = 96.8 bits (242), Expect = 3e-24
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWG + R V V + E++C+ N +C G + C GD
Sbjct: 125 VAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP----------NNVCTGVLTRRGGICNGD 174
Query: 73 SGGPL 77
G PL
Sbjct: 175 GGTPL 179
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 207 bits (529), Expect = 8e-67
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+ G PW AL + +CG L+ +R VLTAAHC E V LG
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHC----KMNEYTVHLGSDTL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+ K ++ RHP +S ND+ L+++ S + + LP
Sbjct: 57 GDRRA----QRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARL-SSMVKKVRLPSRCEPP 111
Query: 215 ---------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
G + + L V+V ++S ++C Y + N+MLCAG + K+
Sbjct: 112 GTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKV-YK-DLLENSMLCAGIPDSKK 169
Query: 266 DSCQGDSGGPL 276
++C GDSGGPL
Sbjct: 170 NACNGDSGGPL 180
Score = 101 bits (253), Expect = 9e-26
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERKPTA-NSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
V+GWG T + L V+V ++S ++C Y + N+MLCAG + K+++C G
Sbjct: 117 VSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKV-YK-DLLENSMLCAGIPDSKKNACNG 174
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 175 DSGGPL 180
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 207 bits (529), Expect = 9e-67
Identities = 59/195 (30%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GGN H P++ L+ K C LIAK VLTAAHC K +V LG H
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN---KRSQVILGAHS- 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+++ E I VK+ +P + + D+ LL++ + LP
Sbjct: 57 ITREEP-TKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKI-NKYVTILHLPKKGDDV 114
Query: 215 -----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSA--SRITNNMLCAGYA 261
G +++LR+VE+ I+ + C + I NM+CAG
Sbjct: 115 KPGTMCQVAGWGR-THNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSL 173
Query: 262 EGKRDSCQGDSGGPL 276
G RDSC GDSG PL
Sbjct: 174 RGGRDSCNGDSGSPL 188
Score = 106 bits (268), Expect = 8e-28
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSA--SRITNNMLCAGYAEGKRDSCQ 70
VAGWGR +++LR+VE+ I+ + C + I NM+CAG G RDSC
Sbjct: 122 VAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCN 181
Query: 71 GDSGGPL 77
GDSG PL
Sbjct: 182 GDSGSPL 188
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 206 bits (526), Expect = 2e-66
Identities = 64/190 (33%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG K + P +L G +CG +L+ + V++AAHC ++V LGEH+
Sbjct: 1 IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY----KSRVEVRLGEHNI 55
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN---- 216
S R IRHP++S N +NDI L+++ + P LP +
Sbjct: 56 KVTEGSE--QFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNT-YVQPVALPTSCAPA 112
Query: 217 ----------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRD 266
+ +N L+ + +PILS +C ++ Y ITN M CAGY EG +D
Sbjct: 113 GTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNS-YP-GMITNAMFCAGYLEGGKD 170
Query: 267 SCQGDSGGPL 276
SCQGDSGGP+
Sbjct: 171 SCQGDSGGPV 180
Score = 107 bits (270), Expect = 3e-28
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 8 GKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRD 67
G + V+GWG +N L+ + +PILS +C ++ Y ITN M CAGY EG +D
Sbjct: 113 GTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNS-YP-GMITNAMFCAGYLEGGKD 170
Query: 68 SCQGDSGGPL 77
SCQGDSGGP+
Sbjct: 171 SCQGDSGGPV 180
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 209 bits (534), Expect = 3e-66
Identities = 65/221 (29%), Positives = 94/221 (42%), Gaps = 43/221 (19%)
Query: 91 ACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV 146
CG E QRI+GG+ + FPW + G LI + VLTAAH +EG
Sbjct: 69 VCGVPREPFEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLTAAHVVEG- 124
Query: 147 NPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSL-------SNFNNDIALLEMES 199
+E + +G + + + + HP + L +NF+NDIAL+ ++
Sbjct: 125 -NREPTMYVGSTSVQTSRLA-KSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182
Query: 200 GVDFEAPQIHPACLPGNSLD-----------------ERKPTANSLRKVEVPILSEEECK 242
V P + P CLPG S D E++ A L+ +P+ +CK
Sbjct: 183 PVKM-GPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCK 241
Query: 243 SA-------GYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
A T NM+CAG +G DSC+GDSGG
Sbjct: 242 EVKVEKPTADAEAYVFTPNMICAGGEKGM-DSCKGDSGGAF 281
Score = 104 bits (262), Expect = 3e-26
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSA-------GYSASRITNNMLC 58
G +G+++GWGR ++R A L+ +P+ +CK A T NM+C
Sbjct: 205 MDGDLGLISGWGRTEKR-DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMIC 263
Query: 59 AGYAEGKRDSCQGDSGGPL 77
AG +G DSC+GDSGG
Sbjct: 264 AGGEKGM-DSCKGDSGGAF 281
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 206 bits (526), Expect = 3e-66
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
++GG+ ++E + A F+C TLI + VLTAAHC + ++ LG H +
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHC----DNTNFQMKLGVHSK 56
Query: 161 LSKNESVPVIIRKVKRAIRHPD-FSLSNFNNDIALLEMESGVDFEAPQIHPACLP----- 214
NE R K P+ + + DI L++++S V I P LP
Sbjct: 57 KVLNE--DEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNS-EHIVPLSLPSSPPS 113
Query: 215 ----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
G+ + + + +L + C++ Y LCAG EG
Sbjct: 114 VGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAG-YPELLTEYRTLCAGILEGG 172
Query: 265 RDSCQGDSGGPL 276
+D+C GDSGGPL
Sbjct: 173 KDTCGGDSGGPL 184
Score = 104 bits (262), Expect = 6e-27
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 8 GKIGIVAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 66
G + + GWG + K + + +L + C++ Y LCAG EG +
Sbjct: 115 GSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAG-YPELLTEYRTLCAGILEGGK 173
Query: 67 DSCQGDSGGPL 77
D+C GDSGGPL
Sbjct: 174 DTCGGDSGGPL 184
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 206 bits (526), Expect = 3e-66
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 101 IVGGNVTKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 158
I+GG+ ++E ++ AL ++ +CG TLI + VLTAAHC + K ++ LG H
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC----DRKNFRIKLGMH 56
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP---- 214
++ + + ++ DI L+ ++S V I P LP
Sbjct: 57 S-KKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNS-KHIAPFSLPSSPP 114
Query: 215 -----------GNSLDERKPTANSLRKVEVPILSEEECKSA-GYSASRITNNMLCAGYAE 262
G + V + +L E C++ T+ LCAG E
Sbjct: 115 SVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILE 174
Query: 263 GKRDSCQGDSGGPL 276
G +D+C+GDSGGPL
Sbjct: 175 GGKDTCKGDSGGPL 188
Score = 103 bits (259), Expect = 1e-26
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 8 GKIGIVAGWGRLDERK-PTANSLRKVEVPILSEEECKSA-GYSASRITNNMLCAGYAEGK 65
G + + GWGR+ + + V + +L E C++ T+ LCAG EG
Sbjct: 117 GSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGG 176
Query: 66 RDSCQGDSGGPL 77
+D+C+GDSGGPL
Sbjct: 177 KDTCKGDSGGPL 188
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 206 bits (526), Expect = 4e-66
Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 92 CGQ-----VERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG 145
CG+ + R+VGG V H +PW +L T+ G +CG TLI+ VLTAAHC+E
Sbjct: 4 CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63
Query: 146 -VNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFE 204
P KV LG H ++ V +V R P DIALL++ S
Sbjct: 64 SPRPSSYKVILGAHQEVNLEP--HVQEIEVSRLFLEPTR------KDIALLKLSSPAVI- 114
Query: 205 APQIHPACLPGNSLD---------------ERKPTANSLRKVEVPILSEEECKSAGYSAS 249
++ PACLP + + A L++ ++P++ + C +
Sbjct: 115 TDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG 174
Query: 250 RITNNMLCAGYAEGKRDSCQGDSGGPL 276
R+ + LCAG+ G DSCQGD+GGPL
Sbjct: 175 RVQSTELCAGHLAGGTDSCQGDAGGPL 201
Score = 106 bits (267), Expect = 1e-27
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+ GWG A L++ ++P++ + C + R+ + LCAG+ G DSCQGD
Sbjct: 138 ITGWGETQGT-FGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGD 196
Query: 73 SGGPL 77
+GGPL
Sbjct: 197 AGGPL 201
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 205 bits (524), Expect = 5e-66
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 27/195 (13%)
Query: 101 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 157
I+GG+ K H P++A L +K CG LI VLTAAHC I VTLG
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW----GSSINVTLGA 56
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN- 216
H+ + + E VKR I HP ++ NF+NDI LL++E + P LP N
Sbjct: 57 HN-IKEQEP-TQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR-TRAVQPLRLPSNK 113
Query: 217 ---------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 261
+++L++V++ + + +C+S + LC G
Sbjct: 114 AQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESD-LRHYYDSTIELCVGDP 172
Query: 262 EGKRDSCQGDSGGPL 276
E K+ S +GDSGGPL
Sbjct: 173 EIKKTSFKGDSGGPL 187
Score = 107 bits (271), Expect = 3e-28
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWG+ +++L++V++ + + +C+S + LC G E K+ S +GD
Sbjct: 124 VAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESD-LRHYYDSTIELCVGDPEIKKTSFKGD 182
Query: 73 SGGPL 77
SGGPL
Sbjct: 183 SGGPL 187
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 205 bits (524), Expect = 5e-66
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 24/191 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + +P AAL ++CG +LI+ +LTAAHC++G + V LG H+
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHN- 57
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+ ++E+ + + H +++ +NDIA++ + V A I LP
Sbjct: 58 IREDEA-TQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA-AIATVGLPSTDVGV 115
Query: 215 ---------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
G D ++ LR+V+VPI+S +C + Y +T+ +C GK
Sbjct: 116 GTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAV-Y--GIVTDGNICIDSTGGK- 171
Query: 266 DSCQGDSGGPL 276
+C GDSGGPL
Sbjct: 172 GTCNGDSGGPL 182
Score = 96.8 bits (242), Expect = 4e-24
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 6 YTGKIGIVAGWGRL-DERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 64
G + GWG D ++ LR+V+VPI+S +C + Y +T+ +C G
Sbjct: 114 GVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAV-YG--IVTDGNICIDSTGG 170
Query: 65 KRDSCQGDSGGPL 77
K +C GDSGGPL
Sbjct: 171 K-GTCNGDSGGPL 182
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 204 bits (521), Expect = 1e-65
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
I+ G+ +H PW AAL + + YCGA L+ + +LTAAHC K +V LG +
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHC----RKKVFRVRLGHYS 56
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP----- 214
ES + + ++I HP +S +ND+ L+++ + + P +
Sbjct: 57 LSPVYES-GQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTK-DVRPINVSSHCPS 114
Query: 215 ----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
G + + L+ + + +LS++ C+ A Y +I + M CAG G+
Sbjct: 115 AGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDA-YP-RQIDDTMFCAGDKAGR 172
Query: 265 RDSCQGDSGGPL 276
DSCQGDSGGP+
Sbjct: 173 -DSCQGDSGGPV 183
Score = 98.0 bits (245), Expect = 1e-24
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
V+GWG + L+ + + +LS++ C+ A Y +I + M CAG G+ DSCQG
Sbjct: 121 VSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDA-YP-RQIDDTMFCAGDKAGR-DSCQG 177
Query: 72 DSGGPL 77
DSGGP+
Sbjct: 178 DSGGPV 183
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 205 bits (523), Expect = 1e-65
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 92 CGQ------VERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 144
CG + RIV G +PW +L K G +CG +LI + V+TAAHC
Sbjct: 1 CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC-- 58
Query: 145 GVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFE 204
V GE D+ S +E + K+ + ++ ++ NNDI LL++ + F
Sbjct: 59 -GVTTSDVVVAGEFDQGSSSE--KIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASF- 114
Query: 205 APQIHPACLP-----------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYS 247
+ + CLP G + T + L++ +P+LS CK +
Sbjct: 115 SQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKY-WG 173
Query: 248 ASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
++I + M+CAG SC GDSGGPL
Sbjct: 174 -TKIKDAMICAG--ASGVSSCMGDSGGPL 199
Score = 94.6 bits (236), Expect = 3e-23
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 13 VAGWGRL-DERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
GWG T + L++ +P+LS CK + ++I + M+CAG SC G
Sbjct: 138 TTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKY-WG-TKIKDAMICAG--ASGVSSCMG 193
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 194 DSGGPL 199
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 204 bits (522), Expect = 1e-65
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
++GG+ ++E ++A + CG TLI + VLTA HC + +++ LG H+
Sbjct: 1 VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHC----DRGNMRIYLGMHNL 55
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
N+ + ++ + + ++ DI L+ + V I P LP
Sbjct: 56 KVLNKD-ALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNS-AHIAPLSLPSNPPSV 113
Query: 215 ---------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
G + + IL C++A Y + LCAG EG +
Sbjct: 114 GSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAA-YK--GLAATTLCAGILEGGK 170
Query: 266 DSCQGDSGGPL 276
D+C+GDSGGPL
Sbjct: 171 DTCKGDSGGPL 181
Score = 102 bits (258), Expect = 2e-26
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 8 GKIGIVAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 66
G + + GWG + + + IL C++A Y + LCAG EG +
Sbjct: 114 GSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAA-YK--GLAATTLCAGILEGGK 170
Query: 67 DSCQGDSGGPL 77
D+C+GDSGGPL
Sbjct: 171 DTCKGDSGGPL 181
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 203 bits (519), Expect = 2e-65
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+ G H PW AAL + + +C L+ + VL+AAHC + LG H
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF----QNSYTIGLGLHSL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+ E + + ++RHP+++ ND+ L++++ V + I +
Sbjct: 57 EADQEP-GSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSE-SDTIRSISIASQCPTA 114
Query: 215 ---------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
G + R P L+ V V ++SEE C Y +M CAG + ++
Sbjct: 115 GNSCLVSGWGLLANGRMP--TVLQCVNVSVVSEEVCSKL-YD-PLYHPSMFCAGGGQDQK 170
Query: 266 DSCQGDSGGPL 276
DSC GDSGGPL
Sbjct: 171 DSCNGDSGGPL 181
Score = 99.1 bits (248), Expect = 4e-25
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
V+GWG L L+ V V ++SEE C Y +M CAG + ++DSC GD
Sbjct: 120 VSGWGLLAN-GRMPTVLQCVNVSVVSEEVCSKL-YD-PLYHPSMFCAGGGQDQKDSCNGD 176
Query: 73 SGGPL 77
SGGPL
Sbjct: 177 SGGPL 181
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 203 bits (519), Expect = 3e-65
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 22/189 (11%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
+V G P+ AAL G CG LI VLTAAHC ++V LG+H+
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHC----KKPNLQVFLGKHNL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSLD- 219
+ S V RA+ HPD+ ++ + DI LL + + I P L +
Sbjct: 57 RQRESS--QEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKL-SELIQPLPLERDCSAN 113
Query: 220 ------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDS 267
++++ + ++S EEC+ A Y +IT NMLCAG + +DS
Sbjct: 114 TTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHA-YP-GQITQNMLCAGDEKYGKDS 171
Query: 268 CQGDSGGPL 276
CQGDSGGPL
Sbjct: 172 CQGDSGGPL 180
Score = 99.5 bits (249), Expect = 3e-25
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+ GWG+ + ++++ + ++S EEC+ A Y +IT NMLCAG + +DSCQGD
Sbjct: 119 ILGWGKTADGD-FPDTIQCAYIHLVSREECEHA-YP-GQITQNMLCAGDEKYGKDSCQGD 175
Query: 73 SGGPL 77
SGGPL
Sbjct: 176 SGGPL 180
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 213 bits (544), Expect = 3e-65
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 58 CAGYAEGKRDSCQGDSGGPLQIAVARPGKMEVIACGQ----VERNQRIVGGNVTKLHEFP 113
CAG+A ++ + + + ++CG R +RIVGG +L + P
Sbjct: 275 CAGFASVAQEETEILTADMDAERRRIKSLLPKLSCGVKNRMHIRRKRIVGGKRAQLGDLP 334
Query: 114 WIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRK 173
W A+ CG I +LTAAHC+ ++ D + + ++I
Sbjct: 335 WQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLK-RIVIEY 393
Query: 174 VKRAIRHPDFSLSNFNNDIALLEMESGVDF---EAPQIHPACLPGNSLD----------- 219
V R I H +++ + NDIAL+EM+ + E P+ PAC+P +
Sbjct: 394 VDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSG 453
Query: 220 ----ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGP 275
+ SL+ EV ++S C Y M CAG +G D+C+GDSGGP
Sbjct: 454 WGREKDNERVFSLQWGEVKLIS--NCSKF-YGNRFYEKEMECAGTYDGSIDACKGDSGGP 510
Query: 276 L 276
L
Sbjct: 511 L 511
Score = 99 bits (249), Expect = 9e-24
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 6 YTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 65
IV+GWGR + + SL+ EV ++S C Y M CAG +G
Sbjct: 444 QPNDTCIVSGWGREKDNERV-FSLQWGEVKLISN--CSKF-YGNRFYEKEMECAGTYDGS 499
Query: 66 RDSCQGDSGGPL 77
D+C+GDSGGPL
Sbjct: 500 IDACKGDSGGPL 511
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 203 bits (518), Expect = 3e-65
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 25/191 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + P+ +L G +CG +LI + V++AAHC I+V LGE +
Sbjct: 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCY----KSGIQVRLGEDNI 55
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP------ 214
+ ++I HP ++ + NNDI L++++S ++ LP
Sbjct: 56 NVVEGNE--QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASL-NSRVASISLPTSCASA 112
Query: 215 ---------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
GN+ + L+ ++ PILS+ CKSA Y +IT+NM CAGY EG +
Sbjct: 113 GTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSA-YP-GQITSNMFCAGYLEGGK 170
Query: 266 DSCQGDSGGPL 276
DSCQGDSGGP+
Sbjct: 171 DSCQGDSGGPV 181
Score = 101 bits (254), Expect = 6e-26
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERKPT-ANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
++GWG + + L+ ++ PILS+ CKSA Y +IT+NM CAGY EG +DSCQG
Sbjct: 118 ISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSA-YP-GQITSNMFCAGYLEGGKDSCQG 175
Query: 72 DSGGPL 77
DSGGP+
Sbjct: 176 DSGGPV 181
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 203 bits (518), Expect = 6e-65
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 34/202 (16%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + H PW AAL F CG L+ ++ VLTAAHCI ++ LG H+
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD----NYQLWLGRHNL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLS-----------NFNNDIALLEMESGVDFEAPQIH 209
+ V + HP F++S ++++D+ LL + D +
Sbjct: 57 FDDENTAQF--VHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVK 114
Query: 210 PACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
LP G+ E + L+ V++ IL +ECK A + ++T+
Sbjct: 115 VVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKA-HV-QKVTDF 172
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
MLC G+ EG +D+C GDSGGPL
Sbjct: 173 MLCVGHLEGGKDTCVGDSGGPL 194
Score = 101 bits (254), Expect = 7e-26
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG ++ + L+ V++ IL +ECK A + ++T+ MLC G+ EG +D+C G
Sbjct: 131 ASGWGSIEPENFSFPDDLQCVDLKILPNDECKKA-HV-QKVTDFMLCVGHLEGGKDTCVG 188
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 189 DSGGPL 194
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 202 bits (515), Expect = 9e-65
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 159
IVGG + ++P+ +L G CGA+++ +VLTAAHC++G+ N +KV +G +
Sbjct: 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNY 60
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN--- 216
LS++ V V+ A+ + ++ ND+AL+ + + + F + P L N
Sbjct: 61 -LSESGDV----YDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFND-LVQPIKLSTNDED 114
Query: 217 ------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
S T N+L+++E+ + +++C+ + R+ ++ +C G+
Sbjct: 115 LESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQW---RVIDSHICTLTKRGE 171
Query: 265 RDSCQGDSGGPL 276
+C GDSGGPL
Sbjct: 172 -GACHGDSGGPL 182
Score = 102 bits (256), Expect = 3e-26
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 3 EANYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 62
+ + + GWG T N+L+++E+ + +++C+ + R+ ++ +C
Sbjct: 112 DEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQW---RVIDSHICTLTK 168
Query: 63 EGKRDSCQGDSGGPL 77
G+ +C GDSGGPL
Sbjct: 169 RGE-GACHGDSGGPL 182
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 202 bits (515), Expect = 2e-64
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 35/203 (17%)
Query: 100 RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
V V + PW A+ + K+ CG L+ + VLTAAHC + +V LG+++
Sbjct: 3 PPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY----NDKYQVWLGKNN 58
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLS-----------NFNNDIALLEMESGVDFEAPQI 208
L S R V +AI HPDF++S +++ND+ LL + D +
Sbjct: 59 FLEDEPSDQH--RLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADI-TDVV 115
Query: 209 HPACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITN 253
P LP G++ + + L+ V + +L E+C A + ++T+
Sbjct: 116 KPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKA-HE-MKVTD 173
Query: 254 NMLCAGYAEGKRDSCQGDSGGPL 276
MLCAG +G +C+ DSGGPL
Sbjct: 174 AMLCAGEMDGGSYTCEHDSGGPL 196
Score = 101 bits (255), Expect = 5e-26
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG K + L+ V + +L E+C A + ++T+ MLCAG +G +C+
Sbjct: 133 ASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKA-HE-MKVTDAMLCAGEMDGGSYTCEH 190
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 191 DSGGPL 196
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 201 bits (514), Expect = 2e-64
Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 23/191 (12%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
+V G T+ W+ +L + K CG +LI + VLTA C + K+ + LG HD
Sbjct: 1 VVNGIPTR-TNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDV 59
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSLD- 219
+ + + V + + P+ +D+ L+++ + + LP
Sbjct: 60 HGRGDEKCKQVLNVSQLVYGPE------GSDLVLMKLARPAVLDD-FVSTIDLPNYGSTI 112
Query: 220 --------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 265
LR + I+ E+C + + +CAG +
Sbjct: 113 PEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGS 172
Query: 266 DSCQGDSGGPL 276
C+GD GGPL
Sbjct: 173 GPCEGDYGGPL 183
Score = 106 bits (266), Expect = 2e-27
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
V GWG LR + I+ E+C + + +CAG + C+GD
Sbjct: 120 VYGWGYTGLI-NYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGD 178
Query: 73 SGGPL 77
GGPL
Sbjct: 179 YGGPL 183
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 201 bits (514), Expect = 2e-64
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
+VGG + + +PW +L + + + CG TL+ + VLTAAHCI + + +V LG
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS--SSRTYRVVLG 58
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFN--NDIALLEMESGVDFEAPQIHPACLP 214
H + + KV + + H D++ + + NDIALL++ S V +I CLP
Sbjct: 59 RHSLSTNEP--GSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSL-TDKIQLGCLP 115
Query: 215 GNS----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 258
L + + L++ ++ ++ C G+ S + NM+CA
Sbjct: 116 AAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICA 175
Query: 259 GYAEGKRDSCQGDSGGPL 276
G +G SC GDSGGPL
Sbjct: 176 GG-DGIISSCNGDSGGPL 192
Score = 108 bits (272), Expect = 2e-28
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
V GWGRL + + L++ ++ ++ C G+ S + NM+CAG +G SC GD
Sbjct: 129 VTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGD 187
Query: 73 SGGPL 77
SGGPL
Sbjct: 188 SGGPL 192
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 201 bits (513), Expect = 3e-64
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 101 IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 158
+VGG+ ++E P++ AL +C LI + VLTAAHC + + I++ LG H
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHC----DRRNIRIKLGMH 56
Query: 159 DRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP---- 214
+ I + + + DI L+ + V + + I P LP
Sbjct: 57 S-KNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTY-STHIAPVSLPSRSR 114
Query: 215 -----------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 263
G P + + I+ + C+ Y + LCAG +G
Sbjct: 115 GVGSRCRIMGWGKISTTTYP--DVPHCTNIFIVKHKWCEPL-YPWVPADSRTLCAGILKG 171
Query: 264 KRDSCQGDSGGPL 276
RD+C GDSGGPL
Sbjct: 172 GRDTCHGDSGGPL 184
Score = 105 bits (265), Expect = 2e-27
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 8 GKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRD 67
G + GWG++ + + I+ + C+ Y + LCAG +G RD
Sbjct: 117 GSRCRIMGWGKIST-TTYPDVPHCTNIFIVKHKWCEPL-YPWVPADSRTLCAGILKGGRD 174
Query: 68 SCQGDSGGPL 77
+C GDSGGPL
Sbjct: 175 TCHGDSGGPL 184
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 200 bits (511), Expect = 4e-64
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 101 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 157
I+GG ++ H P++A L + G+ CG L+ + VLTAAHC I VTLG
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW----GSNINVTLGA 56
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS 217
H+ + + E+ +RAIRHP ++ NDI LL++ V ++P LP
Sbjct: 57 HN-IQRREN-TQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR-NRNVNPVALPRAQ 113
Query: 218 LD---------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 262
+ ++LR+V++ + + +C + S +C G
Sbjct: 114 EGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRI-FG-SYDPRRQICVGDRR 171
Query: 263 GKRDSCQGDSGGPL 276
++ + +GDSGGPL
Sbjct: 172 ERKAAFKGDSGGPL 185
Score = 100 bits (251), Expect = 1e-25
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWGR+ R+ T ++LR+V++ + + +C + S +C G ++ + +GD
Sbjct: 124 VAGWGRVSMRRGT-DTLREVQLRVQRDRQCLRI-FG-SYDPRRQICVGDRRERKAAFKGD 180
Query: 73 SGGPL 77
SGGPL
Sbjct: 181 SGGPL 185
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 200 bits (512), Expect = 5e-64
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
+VGG + + +P +L CG TLI + V+TAAHC++ +V +G
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD--RELTFRVVVG 58
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNF--NNDIALLEMESGVDFEAPQIHPACLP 214
EH+ L++N V++ + HP ++ + DIALL + V + LP
Sbjct: 59 EHN-LNQNNG-TEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTL-NSYVQLGVLP 115
Query: 215 -----------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLC 257
G A +L++ +P + C S+ Y S + N+M+C
Sbjct: 116 RAGTILANNSPCYITGWGL-TRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVC 174
Query: 258 AGYAEGKRDSCQGDSGGPL 276
AG +G R CQGDSGGPL
Sbjct: 175 AGG-DGVRSGCQGDSGGPL 192
Score = 108 bits (273), Expect = 2e-28
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+ GWG A +L++ +P + C S+ Y S + N+M+CAG +G R CQGD
Sbjct: 129 ITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGD 187
Query: 73 SGGPL 77
SGGPL
Sbjct: 188 SGGPL 192
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 199 bits (508), Expect = 1e-63
Identities = 64/196 (32%), Positives = 92/196 (46%), Gaps = 30/196 (15%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
I+GG + H P++A L K + CG LI+++ VLTAAHC +EI V LG
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK----GREITVILG 56
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
HD + K ES KV++ I H ++ +DI LL++E V+ P ++ LP
Sbjct: 57 AHD-VRKRES-TQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVEL-TPAVNVVPLPSP 113
Query: 217 S----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
S R PT+ +LR+VE+ I+ E+ C Y +C G
Sbjct: 114 SDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY---YEYKFQVCVGS 170
Query: 261 AEGKRDSCQGDSGGPL 276
R + GDSGGPL
Sbjct: 171 PTTLRAAFMGDSGGPL 186
Score = 105 bits (264), Expect = 2e-27
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
AGWG+ R PT+ +LR+VE+ I+ E+ C Y +C G R + GD
Sbjct: 125 AAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY---YEYKFQVCVGSPTTLRAAFMGD 181
Query: 73 SGGPL 77
SGGPL
Sbjct: 182 SGGPL 186
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 198 bits (506), Expect = 2e-63
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 101 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 157
I+GG+ K H P++A L T CG L+ + VLTAAHC+ I VTLG
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL----GSSINVTLGA 56
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN- 216
H+ + + E + V+R I HPD++ NDI LL++ D ++ P LP +
Sbjct: 57 HN-IMERER-TQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADI-TDKVSPINLPRSL 113
Query: 217 ---------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 261
L P+ + L++V++ + SEE+C + + + I +CAG
Sbjct: 114 AEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIAR-FK-NYIPFTQICAGDP 171
Query: 262 EGKRDSCQGDSGGPL 276
+++S GDSGGPL
Sbjct: 172 SKRKNSFSGDSGGPL 186
Score = 104 bits (262), Expect = 5e-27
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWGRL P+ + L++V++ + SEE+C + + + I +CAG +++S GD
Sbjct: 124 VAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIAR-FK-NYIPFTQICAGDPSKRKNSFSGD 181
Query: 73 SGGPL 77
SGGPL
Sbjct: 182 SGGPL 186
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 198 bits (506), Expect = 3e-63
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
I+GGN H P++A K +CG L+ + VLTAAHC + + VTLG
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK----GRSMTVTLG 56
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
H+ + E I V +AI HPD++ + +NDI LL++ + P LP
Sbjct: 57 AHN-IKAKEE-TQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKR-TRAVRPLNLPRR 113
Query: 217 ----------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
+ +L +V++ + ++ C+S + +S N +C G
Sbjct: 114 NAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQ-FQSSYNRANEICVGD 172
Query: 261 AEGKRDSCQGDSGGPL 276
++ K S + DSGGPL
Sbjct: 173 SKIKGASFEEDSGGPL 188
Score = 106 bits (266), Expect = 1e-27
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWG++ +L +V++ + ++ C+S + +S N +C G ++ K S + D
Sbjct: 125 VAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQ-FQSSYNRANEICVGDSKIKGASFEED 183
Query: 73 SGGPL 77
SGGPL
Sbjct: 184 SGGPL 188
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 198 bits (505), Expect = 3e-63
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 28/194 (14%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+ G H PW AAL + + CG L+ R VLTAAHC ++ V LG+H
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHC----KKQKYSVRLGDHSL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSN---FNNDIALLEMESGVDFEAPQIHPACLP--- 214
S+++ P +V ++I+HP ++ SN ++DI L+ +++ + ++ P L
Sbjct: 57 QSRDQ--PEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANL-GDKVKPVQLANLC 113
Query: 215 ------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 262
G ++ N+L EV I S+ +C+ A Y +IT M+CAG
Sbjct: 114 PKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERA-YP-GKITEGMVCAGS-S 170
Query: 263 GKRDSCQGDSGGPL 276
D+CQGDSGGPL
Sbjct: 171 NGADTCQGDSGGPL 184
Score = 96.1 bits (240), Expect = 8e-24
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 13 VAGWGRLDERKPT-ANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
++GWG + + N+L EV I S+ +C+ A Y +IT M+CAG D+CQG
Sbjct: 122 ISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERA-YP-GKITEGMVCAGS-SNGADTCQG 178
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 179 DSGGPL 184
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 197 bits (502), Expect = 1e-62
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 35/202 (17%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
+VGG + + PW A+ + + CG L+ + VLTAAHC + +V LG++
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY----VDQYEVWLGKNKL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLS-----------NFNNDIALLEMESGVDFEAPQIH 209
+ S R V ++ HP F++S +F++D+ LL + D +
Sbjct: 57 FQEEPSAQH--RLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADI-TDVVK 113
Query: 210 PACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
P LP G+ R + L+ V + +L E C Y ++T+
Sbjct: 114 PIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKV-YL-QKVTDV 171
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
MLCAG G +D+C+ DSGGPL
Sbjct: 172 MLCAGEMGGGKDTCRDDSGGPL 193
Score = 101 bits (255), Expect = 6e-26
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG + + + L+ V + +L E C Y ++T+ MLCAG G +D+C+
Sbjct: 130 ASGWGSITPTRWQKPDDLQCVFITLLPNENCAKV-YL-QKVTDVMLCAGEMGGGKDTCRD 187
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 188 DSGGPL 193
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 197 bits (502), Expect = 1e-62
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + H PW + +G+ CG L+ + VLTAAHCI + + LG H
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCI----RNKSVILLGRHSL 56
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNN-----------DIALLEMESGVDFEAPQIH 209
++ + +V + HP + +S N D+ LL + + +
Sbjct: 57 FHPEDT--GQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAEL-TDAVK 113
Query: 210 PACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
LP G+ E T L+ V++ ++S + C + ++T
Sbjct: 114 VMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQV-HP-QKVTKF 171
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
MLCAG G + +C GDSGGPL
Sbjct: 172 MLCAGRWTGGKSTCSGDSGGPL 193
Score = 101 bits (253), Expect = 1e-25
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG ++ + T L+ V++ ++S + C + ++T MLCAG G + +C G
Sbjct: 130 ASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQV-HP-QKVTKFMLCAGRWTGGKSTCSG 187
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 188 DSGGPL 193
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 196 bits (501), Expect = 1e-62
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
I+GG K H P++A L + +CG LI + VLTAAHC + I VTLG
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA----GRSITVTLG 56
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
H+ +++ E +V + RHP ++ S ++DI LL+++ + P
Sbjct: 57 AHN-ITEEED-TWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASL-TLAVGTLPFPSQ 113
Query: 217 ----------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
KP +++L++V++ ++ + C N LC G
Sbjct: 114 FNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD---FDHNLQLCVGN 170
Query: 261 AEGKRDSCQGDSGGPL 276
+ + +GDSGGPL
Sbjct: 171 PRKTKSAFKGDSGGPL 186
Score = 103 bits (259), Expect = 1e-26
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
VAGWGR KP +++L++V++ ++ + C N LC G + + +GD
Sbjct: 125 VAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD---FDHNLQLCVGNPRKTKSAFKGD 181
Query: 73 SGGPL 77
SGGPL
Sbjct: 182 SGGPL 186
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 197 bits (502), Expect = 1e-62
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGK----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
+VGG V + + +PW +L K CG +LI + V+TAAHC++ + + +V LG
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD--SARTWRVVLG 58
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFN--NDIALLEMESGVDFEAPQIHPACLP 214
EH+ L+ NE I V H ++ + DIALL + + + A LP
Sbjct: 59 EHN-LNTNEG-KEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASL-NSAVQLAALP 115
Query: 215 GNS----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCA 258
++ P ++SL++ +P + C S+G+ S + M+CA
Sbjct: 116 PSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCA 175
Query: 259 GYAEGKRDSCQGDSGGPL 276
G G C GDSGGPL
Sbjct: 176 G--GGANSGCNGDSGGPL 191
Score = 104 bits (263), Expect = 4e-27
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+ GWG+ P ++SL++ +P + C S+G+ S + M+CAG G C GD
Sbjct: 129 ITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGD 186
Query: 73 SGGPL 77
SGGPL
Sbjct: 187 SGGPL 191
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 196 bits (500), Expect = 2e-62
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + H +P++ +L +G +CGATLIA V++AAHC+ VN + ++V LG H+
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN---- 216
LS+ E + V+R I + N NDI +L++ + A LP
Sbjct: 60 LSRREP-TRQVFAVQR-IFENGYDPVNLLNDIVILQLNGSATIN-ANVQVAQLPAQGRRL 116
Query: 217 ------------SLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGK 264
L + A+ L+++ V +++ C+ + +C +
Sbjct: 117 GNGVQCLAMGWGLLGRNRGIASVLQELNVTVVT-SLCR----------RSNVCTLVRGRQ 165
Query: 265 RDSCQGDSGGPL 276
C GDSG PL
Sbjct: 166 AGVCFGDSGSPL 177
Score = 90.3 bits (225), Expect = 8e-22
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
GWG L + A+ L+++ V +++ C+ + +C + C GD
Sbjct: 124 AMGWGLLGRNRGIASVLQELNVTVVTSL-CR----------RSNVCTLVRGRQAGVCFGD 172
Query: 73 SGGPL 77
SG PL
Sbjct: 173 SGSPL 177
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 196 bits (500), Expect = 3e-62
Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 38/206 (18%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEG--VNPKEIKVTL 155
IVGG ++PW +L + +++ CG +LI + VLTAAHC+ + ++V L
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQL 60
Query: 156 GEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPG 215
E L + + V R I HP F + DIALLE+E V+ + ++H LP
Sbjct: 61 REQH-LYYQDQL----LPVSRIIVHPQFYIIQTGADIALLELEEPVNI-SSRVHTVMLPP 114
Query: 216 NSL------------------DERKPTANSLRKVEVPILSEEECKS-------AGYSASR 250
S DE P L++V+VPI+ C + G
Sbjct: 115 ASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRI 174
Query: 251 ITNNMLCAGYAEGKRDSCQGDSGGPL 276
I ++MLCAG +RDSCQGDSGGPL
Sbjct: 175 IRDDMLCAGN--SQRDSCQGDSGGPL 198
Score = 94.2 bits (235), Expect = 5e-23
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 13 VAGWGRLDER--KPTANSLRKVEVPILSEEECKS-------AGYSASRITNNMLCAGYAE 63
V GWG +D P L++V+VPI+ C + G I ++MLCAG
Sbjct: 127 VTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN-- 184
Query: 64 GKRDSCQGDSGGPL 77
+RDSCQGDSGGPL
Sbjct: 185 SQRDSCQGDSGGPL 198
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 195 bits (498), Expect = 5e-62
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GG + H PW A+ +G F CG L+ + VLTAAHC+ + ++ LG H+
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM----SDDYQIWLGRHN- 55
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLS-----------NFNNDIALLEMESGVDFEAPQIH 209
LSK+E +V + P F LS + ++D+ LL + +
Sbjct: 56 LSKDED-TAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARI-TDAVK 113
Query: 210 PACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
LP G + +L+ VE+ + S E+C A Y ++T
Sbjct: 114 ILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARA-YP-EKMTEF 171
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
+LCA + + C GDSGG L
Sbjct: 172 VLCATHRDDSGSICLGDSGGAL 193
Score = 99 bits (250), Expect = 3e-25
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERK-PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG + + +L+ VE+ + S E+C A Y ++T +LCA + + C G
Sbjct: 130 TSGWGLISTFTNRGSGTLQCVELRLQSNEKCARA-YP-EKMTEFVLCATHRDDSGSICLG 187
Query: 72 DSGGPL 77
DSGG L
Sbjct: 188 DSGGAL 193
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 195 bits (497), Expect = 8e-62
Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 29/196 (14%)
Query: 104 GNVTKLHEFPWIAALTKKGKF----YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
G + + W +L + CG +LIA V+TA HCI + +V LGE+D
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS--TSRTYQVVLGEYD 59
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNF--NNDIALLEMESGVDFEAPQIHPACLP--- 214
R S VI HP ++ + NDIAL+++ ++ A LP
Sbjct: 60 RSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQL-GDKVQLANLPPAG 118
Query: 215 --------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGY 260
G L P + L++ +P + E C + + M+CAG
Sbjct: 119 DILPNEAPCYISGWGR-LYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG 177
Query: 261 AEGKRDSCQGDSGGPL 276
R C GDSGGPL
Sbjct: 178 --DTRSGCNGDSGGPL 191
Score = 106 bits (268), Expect = 9e-28
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
++GWGRL P + L++ +P + E C + + M+CAG R C GD
Sbjct: 129 ISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG--DTRSGCNGD 186
Query: 73 SGGPL 77
SGGPL
Sbjct: 187 SGGPL 191
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 191 bits (487), Expect = 2e-60
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
IVGG + + PW A+ ++ CG LI V+TAAHC +V LG ++
Sbjct: 1 IVGGYKCEKNSQPWQVAVI--NEYLCGGVLIDPSWVITAAHCY----SNNYQVLLGRNNL 54
Query: 161 LSKNESVPVIIRKVKRAIRHPDF-----------SLSNFNNDIALLEMESGVDFEAPQIH 209
R V+++ RHPD+ + + +ND+ LL + D +
Sbjct: 55 FKDEPFA--QRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADI-TGGVK 111
Query: 210 PACLP---------------GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
LP G++ ++ L+ V + +LS E+C Y +T+
Sbjct: 112 VIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIET-YK-DNVTDV 169
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
MLCAG EG +D+C GDSGGPL
Sbjct: 170 MLCAGEMEGGKDTCAGDSGGPL 191
Score = 100 bits (251), Expect = 2e-25
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 13 VAGWGRLDERKPTA-NSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQG 71
+GWG + + + L+ V + +LS E+C Y +T+ MLCAG EG +D+C G
Sbjct: 128 ASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIET-YK-DNVTDVMLCAGEMEGGKDTCAG 185
Query: 72 DSGGPL 77
DSGGPL
Sbjct: 186 DSGGPL 191
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 189 bits (483), Expect = 7e-60
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 30/195 (15%)
Query: 101 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 156
I+ G FP+ A L + + +CG +LI + +LTAAHC+ + V LG
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLG 58
Query: 157 EHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGN 216
+ + +R I H F+ + ND+AL+++ V++ I P LP
Sbjct: 59 SAVQYE-----GEAVVNSERIISHSMFNPDTYLNDVALIKIPH-VEYTD-NIQPIRLPSG 111
Query: 217 SLDER---------------KPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 261
L+ ++ + C Y I + +C +
Sbjct: 112 EELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQE-YPPGIIVESTICGDTS 170
Query: 262 EGKRDSCQGDSGGPL 276
+GK C GDSGGP
Sbjct: 171 DGK-SPCFGDSGGPF 184
Score = 97.7 bits (244), Expect = 2e-24
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 5 NYTGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEG 64
+ V+GWG+ + L+ ++ + C Y I + +C ++G
Sbjct: 117 KFENIWATVSGWGQSNT---DTVILQYTYNLVIDNDRCAQE-YPPGIIVESTICGDTSDG 172
Query: 65 KRDSCQGDSGGPL 77
K C GDSGGP
Sbjct: 173 K-SPCFGDSGGPF 184
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 191 bits (487), Expect = 8e-60
Identities = 44/227 (19%), Positives = 69/227 (30%), Gaps = 36/227 (15%)
Query: 68 SCQGDSGGPLQIAVARPGKMEVIACGQVERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYC 126
+C G L + + Q L + PW L +GK +C
Sbjct: 25 TCSCAQGYRLG-----EDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFC 79
Query: 127 GATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS 186
G +I + VLT A C + I V +R S++ ++ K+ H +
Sbjct: 80 GGVIIRENFVLTTAKCSLL--HRNITVKTY-FNRTSQDP----LMIKITHVHVHMRYDAD 132
Query: 187 NFNNDIALLEMESGVDFEAPQIHPACLPGNSLDERK-----------------PTANSLR 229
ND++LLE+E + P C P E NSL
Sbjct: 133 AGENDLSLLELEWPIQC-PGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLT 191
Query: 230 KVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
V ++ EEC +T C + G +
Sbjct: 192 TRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVV 233
Score = 95.9 bits (239), Expect = 3e-23
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 7 TGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 66
G+++GW R NSL V ++ EEC +T C
Sbjct: 170 PRTRGLLSGWARNGT--DLGNSLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSV 222
Query: 67 DSCQGDSGGPL 77
+ G +
Sbjct: 223 AAMHWMDGSVV 233
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 191 bits (487), Expect = 2e-59
Identities = 47/227 (20%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 68 SCQGDSGGPLQIAVARPGKMEVIACGQVERNQRIVGGNVTKLHEFPWIAALT-KKGKFYC 126
+C G L + + ACG L + PW LT +GK +C
Sbjct: 66 TCSCAQGYRLGEDHKQCVPHDQCACGV-----LTSEKRAPDLQDLPWQVKLTNSEGKDFC 120
Query: 127 GATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS 186
G +I + VLT A C + I V +R S++ ++ K+ H +
Sbjct: 121 GGVIIRENFVLTTAKCSLL--HRNITVKTY-FNRTSQDP----LMIKITHVHVHMRYDAD 173
Query: 187 NFNNDIALLEMESGVDFEAPQIHPACLPGNSLDERK-----------------PTANSLR 229
ND++LLE+E + P C P E NSL
Sbjct: 174 AGENDLSLLELEWPIQC-PGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLT 232
Query: 230 KVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
V ++ EEC +T C + G +
Sbjct: 233 TRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVV 274
Score = 95.5 bits (238), Expect = 5e-23
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 7 TGKIGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR 66
G+++GW R NSL V ++ EEC +T C
Sbjct: 211 PRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSV 263
Query: 67 DSCQGDSGGPL 77
+ G +
Sbjct: 264 AAMHWMDGSVV 274
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 188 bits (479), Expect = 3e-59
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 34/195 (17%)
Query: 101 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 157
IVGG+ + H P++A+L G +CG TLI VLTAAHC+ + + + V LG
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGA 60
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS 217
H+ + E V + + + N NDI L+++ S + + + LP
Sbjct: 61 HN-VRTQEP-TQQHFSVAQVFLNN-YDAENKLNDILLIQLSSPANL-SASVATVQLPQQD 116
Query: 218 ----------------LDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYA 261
+ P A L+++ V +++ + +C
Sbjct: 117 QPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFF-----------CRPHNICTFVP 165
Query: 262 EGKRDSCQGDSGGPL 276
K C GDSGGPL
Sbjct: 166 RRKAGICFGDSGGPL 180
Score = 91.1 bits (227), Expect = 5e-22
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
GWGR+ P A L+++ V +++ + +C K C GD
Sbjct: 127 AMGWGRVGAHDPPAQVLQELNVTVVTFF-----------CRPHNICTFVPRRKAGICFGD 175
Query: 73 SGGPL 77
SGGPL
Sbjct: 176 SGGPL 180
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 184 bits (469), Expect = 1e-57
Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 30/194 (15%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGE 157
+VGG+ PW +L ++G+ +CG +L+ ++ +LTA C + +V LG
Sbjct: 1 VVGGH---PGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGT 57
Query: 158 HDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNS 217
+ ++ + V + + P + + LL++E V ++ CLP
Sbjct: 58 LFQNPQHGEPSLQRVPVAKMVCGPSG------SQLVLLKLERSVTL-NQRVALICLPPEW 110
Query: 218 LD---------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAE 262
+ L + ++S +EC + R+ + +C
Sbjct: 111 YVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIK-HR-GRVRESEMCTEGLL 168
Query: 263 GKRDSCQGDSGGPL 276
+C+GD GGPL
Sbjct: 169 APVGACEGDYGGPL 182
Score = 101 bits (255), Expect = 5e-26
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+AGWG L + ++S +EC + R+ + +C +C+GD
Sbjct: 121 IAGWGETKG-TGNDTVLNVALLNVISNQECNIK-HR-GRVRESEMCTEGLLAPVGACEGD 177
Query: 73 SGGPL 77
GGPL
Sbjct: 178 YGGPL 182
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 182 bits (462), Expect = 9e-54
Identities = 47/235 (20%), Positives = 81/235 (34%), Gaps = 62/235 (26%)
Query: 91 ACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPK 149
CG + N + PW + K + C LI+ + VLTAAHC +
Sbjct: 219 ICGV-----GNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHS 273
Query: 150 EIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS---------NFNNDIALLEMESG 200
+V +G+ E +++A+ P F + + +DIALL++
Sbjct: 274 LWRVNVGDPKSQWGKE------FLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQK 327
Query: 201 VDFEAPQIHPACLPGNSL-----------------------DERKPTANSLRKVEVPI-- 235
V + P CLP +L ++ I
Sbjct: 328 VKM-STHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINL 386
Query: 236 ------------LSEEECKSAGYSASR--ITNNMLCAGYAEGKRDSCQGDSGGPL 276
+S+E+ + R +T+ LC+G E + C+G+SGG +
Sbjct: 387 KMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDE-SPCKGESGGAV 440
Score = 79.2 bits (195), Expect = 1e-16
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 8 GKIGIVAGWGRLDERKPTAN--SLRKVEVPI--------------LSEEECKSAGYSASR 51
G L+++ A+ +L ++ I +S+E+ + R
Sbjct: 354 GSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVR 413
Query: 52 --ITNNMLCAGYAEGKRDSCQGDSGGPL 77
+T+ LC+G E + C+G+SGG +
Sbjct: 414 EVVTDQFLCSGTQEDE-SPCKGESGGAV 440
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 178 bits (452), Expect = 2e-52
Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 73/243 (30%)
Query: 91 ACGQVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGV 146
CG T H+ PW A + KG C ++++ VLTAAHC
Sbjct: 210 LCGM-----VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVD 264
Query: 147 -NPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS---------NFNNDIALLE 196
IKV++G R +++ + HP+++++ ++ D+AL++
Sbjct: 265 DKEHSIKVSVGGEKRD----------LEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIK 314
Query: 197 MESGVDFEAPQIHPACLP----------------------------GNSLDERKPTANSL 228
+++ + + I P CLP L
Sbjct: 315 LKNKLKY-GQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 373
Query: 229 RKVEVPILSEEECKS-------------AGYSASRITNNMLCAGYAEGK--RDSCQGDSG 273
+ EV I + ++ S + +T LC G ++C+GDSG
Sbjct: 374 TRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSG 433
Query: 274 GPL 276
GPL
Sbjct: 434 GPL 436
Score = 85.7 bits (212), Expect = 6e-19
Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 46/165 (27%)
Query: 2 DEANYTGKIGIVAGWGRLDE------------RKPTANSLRKVEVPILSEEECKS----- 44
+ ++ + E L + EV I + ++ S
Sbjct: 334 EGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDA 393
Query: 45 --------AGYSASRITNNMLCAGYAEGK--RDSCQGDSGGPLQIAVARPGKMEVI---- 90
+ +T LC G ++C+GDSGGPL V + + +
Sbjct: 394 QYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPL--IVHKRSRFIQVGVIS 451
Query: 91 -----ACGQVERNQRIVGG------NVTKLHEFPWIAALTKKGKF 124
C +R +++ N+ ++ PW+ +
Sbjct: 452 WGVVDVCKNQKRQKQVPAHARDFHINLFQVL--PWLKEKLQDEDL 494
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 172 bits (436), Expect = 1e-48
Identities = 66/202 (32%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 92 CGQVERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG-VNPK 149
+ R+VGG V H +PW +L T+ G +CG TLI+ VLTAAHC+E P
Sbjct: 553 VEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPS 612
Query: 150 EIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIH 209
KV LG H ++ V +V R P DIALL++ S ++
Sbjct: 613 SYKVILGAHQEVNLEP--HVQEIEVSRLFLEPT------RKDIALLKLSSPAVI-TDKVI 663
Query: 210 PACLPGNSLD---------------ERKPTANSLRKVEVPILSEEECKSAGYSASRITNN 254
PACLP + + A L++ ++P++ + C + R+ +
Sbjct: 664 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQST 723
Query: 255 MLCAGYAEGKRDSCQGDSGGPL 276
LCAG+ G DSCQGDSGGPL
Sbjct: 724 ELCAGHLAGGTDSCQGDSGGPL 745
Score = 97.4 bits (242), Expect = 9e-23
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 13 VAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGD 72
+ GWG A L++ ++P++ + C + R+ + LCAG+ G DSCQGD
Sbjct: 682 ITGWGETQG-TFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGD 740
Query: 73 SGGPL 77
SGGPL
Sbjct: 741 SGGPL 745
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 165 bits (419), Expect = 2e-46
Identities = 50/242 (20%), Positives = 86/242 (35%), Gaps = 73/242 (30%)
Query: 92 CGQVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEG-V 146
CG T H+ PW A + KG C ++++ VLTAAHC
Sbjct: 453 CGM-----VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD 507
Query: 147 NPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS---------NFNNDIALLEM 197
IKV++G R +++ + HP+++++ ++ D+AL+++
Sbjct: 508 KEHSIKVSVGGEKR----------DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKL 557
Query: 198 ESGVDFEAPQIHPACLPGNSLDER----------------------------KPTANSLR 229
++ + + I P CLP R L
Sbjct: 558 KNKLKY-GQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLT 616
Query: 230 KVEVPILSEEECKS-------------AGYSASRITNNMLCAGYAEGK--RDSCQGDSGG 274
+ EV I + ++ S + +T LC G ++C+GDSGG
Sbjct: 617 RKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGG 676
Query: 275 PL 276
PL
Sbjct: 677 PL 678
Score = 78.6 bits (193), Expect = 2e-16
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 41/149 (27%)
Query: 13 VAGWGRLDERKPTA-------NSLRKVEVPILSEEECKS-------------AGYSASRI 52
L + A L + EV I + ++ S + +
Sbjct: 592 QQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVV 651
Query: 53 TNNMLCAGYAEGK--RDSCQGDSGGPLQIAVARPGKMEVI---------ACGQVERNQRI 101
T LC G ++C+GDSGGPL V + + + C +R +++
Sbjct: 652 TPRFLCTGGVSPYADPNTCRGDSGGPL--IVHKRSRFIQVGVISWGVVDVCKNQKRQKQV 709
Query: 102 VGG------NVTKLHEFPWIAALTKKGKF 124
N+ ++ PW+ +
Sbjct: 710 PAHARDFHINLFQVL--PWLKEKLQDEDL 736
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 129 bits (326), Expect = 1e-37
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 101 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 159
IV G +PW +L K G +CG +LI + V+TAAHC V GE D
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGV---TTSDVVVAGEFD 57
Query: 160 RLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLP 214
+ S +E + K+ + ++ ++ NNDI LL++ + F + + CLP
Sbjct: 58 QGSSSE--KIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASF-SQTVSAVCLP 109
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 111 bits (281), Expect = 1e-30
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 187 NFNNDIALLEMESGVDFEAPQIHPACLP---------------GN--SLDERKPTANSLR 229
++++D+ LL ++S + LP G+ + + ++
Sbjct: 5 DYSHDLMLLRLQSPAKI-TDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQ 63
Query: 230 KVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
V++ +L C A + ++T +MLCAGY G +D+C GDSGGPL
Sbjct: 64 CVQLTLLQNTFCADA-HP-DKVTESMLCAGYLPGGKDTCMGDSGGPL 108
Score = 98.8 bits (247), Expect = 9e-26
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 13 VAGWGRLDERKPTA---NSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSC 69
+GWG ++ + ++ V++ +L C A + ++T +MLCAGY G +D+C
Sbjct: 43 ASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADA-HP-DKVTESMLCAGYLPGGKDTC 100
Query: 70 QGDSGGPL 77
GDSGGPL
Sbjct: 101 MGDSGGPL 108
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 104 bits (262), Expect = 8e-29
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 101 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 160
I+GG + + PW A+ F CG L+ + VLTAAHC +V LG H+
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK----NDNYEVWLGRHN- 55
Query: 161 LSKNESVPVIIRKVKRAIRHPDFSLS 186
L +NE+ V HP F+LS
Sbjct: 56 LFENEN-TAQFFGVTADFPHPGFNLS 80
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C*
1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C
1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C
2gmt_C* ...
Length = 97
Score = 82.6 bits (205), Expect = 3e-20
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 24 PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 77
T + L++ +P+LS CK + ++I + M+CAG SC GDSGGPL
Sbjct: 2 NTPDRLQQASLPLLSNTNCKKY-WG-TKIKDAMICAG--ASGVSSCMGDSGGPL 51
Score = 82.6 bits (205), Expect = 3e-20
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 223 PTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
T + L++ +P+LS CK + ++I + M+CAG SC GDSGGPL
Sbjct: 2 NTPDRLQQASLPLLSNTNCKKY-WG-TKIKDAMICAG--ASGVSSCMGDSGGPL 51
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 67.7 bits (165), Expect = 1e-13
Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 49/200 (24%)
Query: 101 IVGGN-----VTKLHEFPW--IAALTKKGKFYCGATLIAKRHVLTAAHCIE----GVNPK 149
+V G+ V P+ IA +T G C TLIA +LT HC+
Sbjct: 1 VVIGDDGRTKVANTRVAPYNSIAYITFGGSS-CTGTLIAPNKILTNGHCVYNTASRSYSA 59
Query: 150 EIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIH 209
+ V G +D + N S + V + D A+++ ++ +
Sbjct: 60 KGSVYPGMNDSTAVNGSANMTEFYVPSGYINT----GASQYDFAVIKTDTNI-------- 107
Query: 210 PACLPGNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR---- 265
+ S+ + K +GY ++ + + +
Sbjct: 108 GNTVGYRSIRQVTNLTG------------TTIKISGYPGDKMRSTGKVSQWEMSGSVTRE 155
Query: 266 ---------DSCQGDSGGPL 276
D+ G+SG +
Sbjct: 156 DTNLAYYTIDTFSGNSGSAM 175
Score = 27.6 bits (61), Expect = 4.8
Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 25/81 (30%)
Query: 10 IGIVAGWGRLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR--- 66
IG G+ + + K +GY ++ + + +
Sbjct: 107 IGNTVGYRSIRQVTNLTG------------TTIKISGYPGDKMRSTGKVSQWEMSGSVTR 154
Query: 67 ----------DSCQGDSGGPL 77
D+ G+SG +
Sbjct: 155 EDTNLAYYTIDTFSGNSGSAM 175
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 56.2 bits (135), Expect = 1e-09
Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)
Query: 113 PWIAAL---TKKGKFYCGATLIA---KRHVLTAAHCI----EGVNPKEIKVTLGEHDRLS 162
P I + T +G F C A ++A + V TA HC+ G +
Sbjct: 7 PHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYG-- 64
Query: 163 KNESVPVIIRKVKRAIRHPDFSLS-NFNNDIALLEMESGVDFEAPQIHPACLPGNSLDER 221
+ + + +++ +F +D A +E+ + + +
Sbjct: 65 ---ESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLETKGG---TTVQQQVGTASPIAFN 118
Query: 222 KPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
+P P + + TN+ + + + G SGGP
Sbjct: 119 QPRGQYYSAYGYPAAAPFNGQELHSCHGTATNDPMGSSTQGIPCNMTGGSSGGPW 173
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 51.4 bits (122), Expect = 9e-08
Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 101 IVGGN----VTKLHEFPW-----IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEI 151
I+ N +T + I G F ++ K +LT H ++
Sbjct: 2 ILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVD--ATHGD 59
Query: 152 KVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAP 206
L ++ P ++ ++ D+A+++ +
Sbjct: 60 PHALKAFPSAINQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHI 108
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 47.7 bits (113), Expect = 1e-06
Identities = 24/198 (12%), Positives = 52/198 (26%), Gaps = 48/198 (24%)
Query: 101 IVGGN----VTKLHEFPW-----IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEI 151
I+ N +T + I G F ++ K +LT H ++
Sbjct: 2 ILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVD--ATHGD 59
Query: 152 KVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPA 211
L ++ P ++ ++ D+A+++ +
Sbjct: 60 PHALKAFPSAINQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHIGEVVK 113
Query: 212 CLP-GNSLDERKPTANSLRKVEVPILSEEECKSAGYSASRITNNMLCAGYAEGKR----- 265
N+ + + GY + M ++GK
Sbjct: 114 PATMSNNAE---------------TQVNQNITVTGYPGDKPVATMW---ESKGKITYLKG 155
Query: 266 -------DSCQGDSGGPL 276
+ G+SG P+
Sbjct: 156 EAMQYDLSTTGGNSGSPV 173
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 47.4 bits (111), Expect = 2e-06
Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 14/176 (7%)
Query: 115 IAALTKKGKFYCGATLI------AKRHVLTAAHCIEGVNPKEIKVTLGEHDR------LS 162
+ A +K G C +L+ K + LTA HC G + + + + +
Sbjct: 25 VGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84
Query: 163 KNESVPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVDFEAPQIHPACLPGNSLDERK 222
S + + + +D LLE+ + + A + A +
Sbjct: 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAAN-PAFNLFWAGWDRRDQNYPG 143
Query: 223 PTANSLRKVEVPILSEEECKSAGYSASR-ITNNMLCAGYAEGKRDSCQGDSGGPLQ 277
A V +S ++ + L + + G SG P+
Sbjct: 144 AIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIY 199
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.0 bits (106), Expect = 2e-05
Identities = 31/212 (14%), Positives = 55/212 (25%), Gaps = 69/212 (32%)
Query: 132 AKRHVLTA-----AHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLS 186
A H + NP + + G E+ +I + D L
Sbjct: 1649 ADNHFKDTYGFSILDIVIN-NPVNLTIHFGGEKGKRIRENYSAMIFETI-----VDGKLK 1702
Query: 187 NFNNDIALLEMESGVDFEAPQIHPACLPGNSLDERKPTANS---LRKVEVPILS--EEE- 240
+ E + F + + L T + L +E + +
Sbjct: 1703 TEKIFKEINEHSTSYTFRSEK--------GLLSA---TQFTQPALTLMEKAAFEDLKSKG 1751
Query: 241 -----CKSAG-----YSASRITNNMLCAGYAE--------------GK--RDSCQGDSGG 274
AG Y+A L + A+ G + + D G
Sbjct: 1752 LIPADATFAGHSLGEYAA-------LAS-LADVMSIESLVEVVFYRGMTMQVAVPRDELG 1803
Query: 275 PLQIAVA--RPGKM-----EATLSKVVSRVQE 299
+ PG++ + L VV RV +
Sbjct: 1804 RSNYGMIAINPGRVAASFSQEALQYVVERVGK 1835
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.5 bits (104), Expect = 4e-05
Identities = 48/330 (14%), Positives = 102/330 (30%), Gaps = 105/330 (31%)
Query: 23 KPTANSLRKVEVPILSEEECKSAGYSASRITN-----NMLCA----GYAEGKRDSCQGDS 73
K + + ILS+EE S ++ L + + + + +
Sbjct: 36 KDVQDMPK----SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91
Query: 74 G---GPLQIAVARPGKMEVIACGQVER----NQRIVGGNVTKLHEFPWI-AALTK----- 120
P++ +P M + Q +R NQ NV++L + + AL +
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 121 -------KGKFYCGATLIAKRHVLTAAHC----IEGVNPKEIK-VTLGEHDRLSKNESVP 168
G G T + C ++ +I + L + E+V
Sbjct: 152 NVLIDGVLG---SGKT------WVALDVCLSYKVQCKMDFKIFWLNLKNCNS---PETVL 199
Query: 169 VIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVD-----FEAPQIHPACL--------PG 215
+++K+ I S S+ +++I L + S ++ + CL
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIK-LRIHSIQAELRRLLKSKP-YENCLLVLLNVQNAK 257
Query: 216 --NSLDER---------KPTANSL---RKVEVPI------LSEEECKSAGYSASRITNNM 255
N+ + K + L + + L+ +E KS
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS------------ 305
Query: 256 LCAGYAEGK-----RDSCQGDSGGPLQIAV 280
L Y + + R+ + P ++++
Sbjct: 306 LLLKYLDCRPQDLPREVLTTN---PRRLSI 332
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 39.6 bits (92), Expect = 7e-04
Identities = 10/96 (10%), Positives = 25/96 (26%), Gaps = 1/96 (1%)
Query: 107 TKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNES 166
+ + + KG LI K ++T H + ++
Sbjct: 31 NARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKN 90
Query: 167 VPVIIRKVKRAIRHPDFSLSNFNNDIALLEMESGVD 202
A + D+A+++++
Sbjct: 91 EFPTPYGKFEAEEIKESP-YGQGLDLAIIKLKPNEK 125
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A
{Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A
1exf_A 1due_A
Length = 242
Score = 32.9 bits (75), Expect = 0.078
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 130 LIAKRHVLTAAHCIEGVNPKEIKVTL--GEHDRLSKNESVPVIIRKVKRAIRHPDFSLSN 187
LI K VLT H + N KV+ + + N P +VK ++ P +
Sbjct: 61 LIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGA--- 117
Query: 188 FNNDIALLEMESGVD 202
D+AL+ ++ +
Sbjct: 118 -GVDLALIRLKPDQN 131
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus
aureus} PDB: 2w7u_A
Length = 200
Score = 32.4 bits (74), Expect = 0.11
Identities = 7/69 (10%), Positives = 20/69 (28%), Gaps = 11/69 (15%)
Query: 131 IAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNN 190
+ K ++T H + + K + H ++ +
Sbjct: 29 VGKNTIVTNKHIAKSND--IFKNRVSAHHSSKGKGGGNYDVKDIVE---------YPGKE 77
Query: 191 DIALLEMES 199
D+A++ +
Sbjct: 78 DLAIVHVHE 86
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Length = 204
Score = 31.0 bits (70), Expect = 0.35
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 12/78 (15%)
Query: 130 LIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFN 189
++ K +LT H + + D+ + I
Sbjct: 28 VVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINY------------PGK 75
Query: 190 NDIALLEMESGVDFEAPQ 207
D++++++E P+
Sbjct: 76 EDVSVIQVEERAIERGPK 93
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A
{Staphylococcus aureus}
Length = 210
Score = 30.5 bits (69), Expect = 0.52
Identities = 10/99 (10%), Positives = 23/99 (23%), Gaps = 20/99 (20%)
Query: 130 LIAKRHVLTAAHCIEG-VNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNF 188
+I K ++T H + I + I
Sbjct: 29 VIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISD-------------YPG 75
Query: 189 NNDIALLEMESGVDFEAPQIHPACLPGNSLDERKPTANS 227
+ DI+++ E + N + + +
Sbjct: 76 DEDISVMN------IEEQAVERGPKGFNFNENVQAFNFA 108
>3k6y_A Serine protease, possible membrane-associated serine protease;
oxidative stress, disulfide, BENT helix, HY protease;
1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Length = 237
Score = 27.7 bits (62), Expect = 3.6
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 131 IAKRHVLTAAHCIEGVNPKEIKVTLG 156
I+ V+T AH + G N + V G
Sbjct: 65 ISPDRVMTNAHVVAGSN--NVTVYAG 88
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 27.2 bits (59), Expect = 4.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 193 ALLEMESGVDFEAPQIHPA 211
AL ++++ + A PA
Sbjct: 21 ALKKLQASLKLYADDSAPA 39
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second
tetrahedral inter tetrapeptide, beta barrels, alpha
helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus}
SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E
2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E
2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E
...
Length = 185
Score = 27.1 bits (60), Expect = 5.1
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 126 CGATLIAKRHVLTAAHCIEG 145
+ + LTA HC +G
Sbjct: 18 FNVRSGSTYYFLTAGHCTDG 37
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol
protease, RNA replication, ribosomal frameshifting,
catalytic triad, membrane; 2.00A {Human astrovirus 1}
Length = 163
Score = 26.9 bits (60), Expect = 5.2
Identities = 9/69 (13%), Positives = 17/69 (24%), Gaps = 22/69 (31%)
Query: 131 IAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSLSNFNN 190
+ ++TAAH + + V +R +
Sbjct: 27 FSGNDIVTAAHVVGNN--TFVNVCYE-------GLMYEAKVRYMP-------------EK 64
Query: 191 DIALLEMES 199
DIA +
Sbjct: 65 DIAFITCPG 73
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase;
2.40A {Sesbania mosaic virus}
Length = 191
Score = 27.1 bits (59), Expect = 5.4
Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 28/151 (18%)
Query: 126 CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIRKVKRAIRHPDFSL 185
C + + +LTA H G ++V S
Sbjct: 32 CRTKIDGEDCLLTAHHVWCNSMRPTGLAKAG---------------KQVSVEDWEISMSS 76
Query: 186 SNFNNDIALLEMESGVDFEAPQIHPACLPGNSLDERKPTANSLRKVEVPILSEEECKSAG 245
S+ D A++ + + V + L S P++ + S +C +G
Sbjct: 77 SDKMLDFAIVRVPTHVW--------SKLGVKSTPLVCPSSKD--VITCYGGSSSDCLMSG 126
Query: 246 YSASRITNNMLCAGYAEGKRDSCQGDSGGPL 276
+S + + G SG PL
Sbjct: 127 VGSSSTSEF---TWKLTHTCPTAAGWSGTPL 154
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal
membrane, metal-binding, metalloprotease; HET: PHE;
1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A*
2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A
2dq6_A 2dqm_A* 2zxg_A*
Length = 891
Score = 27.6 bits (61), Expect = 5.8
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 166 SVPVIIRKVKRAIRHPDFSLSNFN 189
++ V+ ++H F++SN N
Sbjct: 778 PAANVLETVRGLLQHRSFTMSNPN 801
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2,
structural genomics, protein structure initiative; 2.05A
{Neisseria meningitidis}
Length = 867
Score = 27.5 bits (61), Expect = 6.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 168 PVIIRKVKRAIRHPDFSLSNFN 189
+++V+ A++HP FSL N N
Sbjct: 757 SDTLQQVRTALQHPKFSLENPN 778
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.132 0.388
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,554,807
Number of extensions: 270248
Number of successful extensions: 1279
Number of sequences better than 10.0: 1
Number of HSP's gapped: 612
Number of HSP's successfully gapped: 209
Length of query: 302
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 209
Effective length of database: 4,105,140
Effective search space: 857974260
Effective search space used: 857974260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (25.6 bits)