Query psy866
Match_columns 132
No_of_seqs 114 out of 702
Neff 5.1
Searched_HMMs 29240
Date Sat Aug 17 00:30:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 99.8 4.4E-21 1.5E-25 161.8 4.7 99 8-114 53-163 (475)
2 4e1o_A HDC, histidine decarbox 99.8 7E-21 2.4E-25 160.3 5.3 98 8-113 58-168 (481)
3 1js3_A DDC;, DOPA decarboxylas 99.7 2E-17 7E-22 137.8 5.5 97 9-113 54-162 (486)
4 3vp6_A Glutamate decarboxylase 99.7 7.8E-17 2.7E-21 137.2 6.0 97 8-113 76-177 (511)
5 2qma_A Diaminobutyrate-pyruvat 99.6 9.2E-16 3.1E-20 128.7 5.9 95 9-112 81-180 (497)
6 2okj_A Glutamate decarboxylase 99.5 1.5E-14 5.1E-19 121.5 5.7 94 9-112 74-173 (504)
7 2jis_A Cysteine sulfinic acid 99.4 1.9E-13 6.5E-18 115.4 5.3 93 9-112 90-187 (515)
8 2dgk_A GAD-beta, GADB, glutama 99.0 4.3E-10 1.5E-14 92.8 4.8 91 8-112 25-125 (452)
9 3bc8_A O-phosphoseryl-tRNA(SEC 98.7 7.9E-10 2.7E-14 95.1 -1.0 67 28-112 67-139 (450)
10 3mad_A Sphingosine-1-phosphate 98.5 1.6E-08 5.4E-13 84.8 0.3 98 8-114 78-184 (514)
11 3mc6_A Sphingosine-1-phosphate 98.4 9.4E-08 3.2E-12 79.3 3.8 97 7-112 44-148 (497)
12 3hbx_A GAD 1, glutamate decarb 98.2 6.6E-07 2.3E-11 75.7 3.4 92 9-113 40-140 (502)
13 3f9t_A TDC, L-tyrosine decarbo 97.5 0.00011 3.8E-09 57.2 5.0 94 7-113 11-109 (397)
14 2z67_A O-phosphoseryl-tRNA(SEC 97.0 4.9E-05 1.7E-09 63.0 -1.8 66 27-112 101-172 (456)
15 3kgw_A Alanine-glyoxylate amin 94.1 0.044 1.5E-06 42.5 4.0 79 25-112 18-96 (393)
16 1wyu_B Glycine dehydrogenase s 93.9 0.044 1.5E-06 45.4 3.8 93 8-112 47-145 (474)
17 3nnk_A Ureidoglycine-glyoxylat 91.6 0.12 4.1E-06 40.5 3.2 78 24-111 7-85 (411)
18 3ffr_A Phosphoserine aminotran 90.2 0.081 2.8E-06 40.5 1.0 73 30-111 4-82 (362)
19 3isl_A Purine catabolism prote 87.9 0.23 7.8E-06 38.9 2.1 79 22-110 3-82 (416)
20 2yrr_A Aminotransferase, class 85.9 0.22 7.7E-06 37.7 1.0 71 34-112 4-74 (353)
21 2bkw_A Alanine-glyoxylate amin 85.0 0.32 1.1E-05 37.5 1.5 75 29-111 4-80 (385)
22 3zrp_A Serine-pyruvate aminotr 84.4 0.43 1.5E-05 36.7 2.0 35 75-110 39-73 (384)
23 2huf_A Alanine glyoxylate amin 84.2 0.49 1.7E-05 36.8 2.3 76 27-111 16-91 (393)
24 3f0h_A Aminotransferase; RER07 84.2 0.42 1.4E-05 36.9 1.9 71 33-112 22-93 (376)
25 2fyf_A PSAT, phosphoserine ami 84.1 0.44 1.5E-05 37.7 2.0 86 17-111 25-118 (398)
26 3hl2_A O-phosphoseryl-tRNA(SEC 82.9 0.28 9.7E-06 42.9 0.4 36 75-112 121-157 (501)
27 1svv_A Threonine aldolase; str 82.3 0.67 2.3E-05 35.2 2.3 61 43-113 28-89 (359)
28 2ch1_A 3-hydroxykynurenine tra 82.2 0.69 2.4E-05 35.9 2.4 77 26-111 14-90 (396)
29 1vjo_A Alanine--glyoxylate ami 81.3 0.98 3.4E-05 35.1 3.0 75 28-112 32-107 (393)
30 3dzz_A Putative pyridoxal 5'-p 76.6 1 3.4E-05 34.9 1.7 43 62-112 65-107 (391)
31 1iug_A Putative aspartate amin 76.1 1.1 3.8E-05 34.0 1.8 68 34-112 5-73 (352)
32 1v72_A Aldolase; PLP-dependent 74.4 1.2 4E-05 33.9 1.5 36 75-113 47-82 (356)
33 1wyu_A Glycine dehydrogenase ( 73.3 5 0.00017 32.2 5.1 30 75-106 112-141 (438)
34 1gd9_A Aspartate aminotransfer 72.5 7.5 0.00026 30.0 5.8 42 63-112 67-109 (389)
35 2dr1_A PH1308 protein, 386AA l 72.3 1.6 5.6E-05 33.5 1.9 71 29-110 20-91 (386)
36 2a7v_A Serine hydroxymethyltra 71.7 1.7 5.7E-05 37.0 2.0 41 63-111 100-141 (490)
37 3l8a_A METC, putative aminotra 70.0 2.3 7.9E-05 33.8 2.4 44 62-113 99-142 (421)
38 4hvk_A Probable cysteine desul 69.1 5.5 0.00019 30.2 4.2 35 75-111 47-81 (382)
39 4eb5_A Probable cysteine desul 67.7 5.9 0.0002 30.2 4.2 35 75-111 47-81 (382)
40 3kax_A Aminotransferase, class 67.2 1.7 5.7E-05 33.5 1.0 42 63-112 63-104 (383)
41 1m32_A 2-aminoethylphosphonate 67.1 0.63 2.1E-05 35.4 -1.5 38 75-112 41-78 (366)
42 1c7n_A Cystalysin; transferase 65.9 3.6 0.00012 32.0 2.7 44 61-112 68-111 (399)
43 4dq6_A Putative pyridoxal phos 63.9 3.6 0.00012 31.6 2.3 43 62-112 70-112 (391)
44 3if2_A Aminotransferase; YP_26 62.8 5.1 0.00017 31.8 3.1 42 63-112 87-128 (444)
45 3n5m_A Adenosylmethionine-8-am 61.0 2.6 9E-05 33.9 1.1 34 75-111 95-128 (452)
46 2z9v_A Aspartate aminotransfer 60.9 6.1 0.00021 30.4 3.1 34 75-110 46-79 (392)
47 3vax_A Putative uncharacterize 60.0 6.5 0.00022 30.4 3.1 35 75-111 67-101 (400)
48 3h14_A Aminotransferase, class 59.9 5.5 0.00019 30.9 2.7 60 45-112 49-113 (391)
49 2oqx_A Tryptophanase; lyase, p 58.5 3.3 0.00011 33.1 1.3 34 76-113 79-112 (467)
50 3lvm_A Cysteine desulfurase; s 58.5 3.7 0.00013 32.1 1.5 35 75-111 72-106 (423)
51 3b1d_A Betac-S lyase; HET: PLP 62.0 2.2 7.6E-05 33.4 0.0 42 63-112 70-111 (392)
52 3nx3_A Acoat, acetylornithine 55.9 4.2 0.00014 31.7 1.4 35 75-113 82-116 (395)
53 3nra_A Aspartate aminotransfer 55.5 13 0.00045 28.7 4.2 42 63-112 82-124 (407)
54 2c0r_A PSAT, phosphoserine ami 55.5 5.9 0.0002 30.4 2.2 35 75-109 53-87 (362)
55 1j32_A Aspartate aminotransfer 54.6 3.6 0.00012 31.9 0.8 42 63-112 71-112 (388)
56 2o0r_A RV0858C (N-succinyldiam 54.5 4 0.00014 32.1 1.1 42 63-112 66-108 (411)
57 1u08_A Hypothetical aminotrans 54.4 5.7 0.00019 30.8 1.9 41 63-111 71-112 (386)
58 3ruy_A Ornithine aminotransfer 53.3 3 0.0001 32.5 0.1 35 75-113 82-116 (392)
59 1eg5_A Aminotransferase; PLP-d 53.2 12 0.00041 28.4 3.6 35 75-111 48-82 (384)
60 3a9z_A Selenocysteine lyase; P 52.5 5.8 0.0002 31.3 1.7 35 75-111 65-99 (432)
61 3fdb_A Beta C-S lyase, putativ 51.2 3.8 0.00013 31.4 0.5 43 62-112 61-103 (377)
62 3aow_A Putative uncharacterize 50.8 17 0.00059 29.4 4.4 41 63-112 122-162 (448)
63 4ffc_A 4-aminobutyrate aminotr 48.6 3.6 0.00012 33.5 -0.1 37 75-112 111-147 (453)
64 3m5u_A Phosphoserine aminotran 48.4 10 0.00035 30.7 2.6 78 30-108 5-87 (361)
65 3ele_A Amino transferase; RER0 48.4 12 0.00041 28.9 3.0 42 63-112 80-121 (398)
66 3i5t_A Aminotransferase; pyrid 47.9 3.1 0.00011 34.4 -0.6 37 75-113 101-137 (476)
67 1yiz_A Kynurenine aminotransfe 47.9 7.6 0.00026 30.6 1.8 42 63-112 81-123 (429)
68 1w23_A Phosphoserine aminotran 47.7 12 0.00042 28.3 2.9 32 75-107 52-84 (360)
69 3g7q_A Valine-pyruvate aminotr 47.1 13 0.00044 28.9 2.9 42 63-112 79-120 (417)
70 2zc0_A Alanine glyoxylate tran 47.1 4.6 0.00016 31.5 0.3 42 63-112 79-120 (407)
71 1xi9_A Putative transaminase; 46.6 8 0.00027 30.3 1.7 41 63-111 82-122 (406)
72 3i4j_A Aminotransferase, class 46.5 4 0.00014 32.4 -0.1 36 75-112 76-111 (430)
73 3ezs_A Aminotransferase ASPB; 45.1 8.4 0.00029 29.5 1.6 43 63-113 63-105 (376)
74 1d2f_A MALY protein; aminotran 45.1 9.6 0.00033 29.5 1.9 61 44-112 45-109 (390)
75 3cq5_A Histidinol-phosphate am 45.0 11 0.00038 29.0 2.3 41 63-111 73-113 (369)
76 3jtx_A Aminotransferase; NP_28 44.7 8 0.00027 29.9 1.4 43 63-113 70-114 (396)
77 2w8t_A SPT, serine palmitoyltr 43.8 25 0.00087 27.8 4.3 33 75-111 113-145 (427)
78 2cy8_A D-phgat, D-phenylglycin 43.8 5 0.00017 32.2 0.1 58 44-112 77-135 (453)
79 3oks_A 4-aminobutyrate transam 43.3 3.4 0.00012 33.6 -1.0 37 75-112 108-144 (451)
80 3dxv_A Alpha-amino-epsilon-cap 43.2 3.3 0.00011 33.0 -1.1 37 75-112 90-126 (439)
81 2gb3_A Aspartate aminotransfer 42.8 6.1 0.00021 31.1 0.4 42 63-112 83-124 (409)
82 2z61_A Probable aspartate amin 42.5 9.5 0.00033 29.3 1.5 42 63-112 70-111 (370)
83 1o4s_A Aspartate aminotransfer 41.3 8.7 0.0003 30.0 1.1 60 44-111 58-122 (389)
84 3fq8_A Glutamate-1-semialdehyd 39.8 12 0.00041 29.6 1.7 35 75-112 96-130 (427)
85 4e77_A Glutamate-1-semialdehyd 38.5 11 0.00038 29.8 1.4 35 75-112 97-131 (429)
86 3dod_A Adenosylmethionine-8-am 37.1 6.8 0.00023 31.5 -0.1 37 75-113 91-127 (448)
87 2e7j_A SEP-tRNA:Cys-tRNA synth 37.0 7.5 0.00026 29.6 0.1 34 75-112 57-91 (371)
88 3tfu_A Adenosylmethionine-8-am 37.0 5.3 0.00018 32.8 -0.8 36 75-112 122-157 (457)
89 4adb_A Succinylornithine trans 35.9 11 0.00039 29.1 1.0 34 75-112 85-118 (406)
90 2vi8_A Serine hydroxymethyltra 35.7 9.8 0.00033 29.4 0.6 39 63-112 69-107 (405)
91 1vp4_A Aminotransferase, putat 35.6 17 0.00059 28.7 2.1 76 28-111 42-130 (425)
92 3lws_A Aromatic amino acid bet 34.9 8.2 0.00028 29.4 0.0 35 75-113 51-85 (357)
93 3qm2_A Phosphoserine aminotran 34.3 13 0.00046 30.2 1.2 38 70-108 71-109 (386)
94 1s0a_A Adenosylmethionine-8-am 34.0 9.4 0.00032 30.2 0.2 34 76-111 91-124 (429)
95 3pj0_A LMO0305 protein; struct 33.8 7.3 0.00025 29.7 -0.4 35 75-113 52-86 (359)
96 2dkj_A Serine hydroxymethyltra 33.8 30 0.001 26.6 3.1 35 75-112 73-107 (407)
97 2dou_A Probable N-succinyldiam 33.6 21 0.00072 27.4 2.2 42 63-112 67-109 (376)
98 2epj_A Glutamate-1-semialdehyd 33.5 10 0.00034 30.2 0.3 35 75-112 100-134 (434)
99 3l44_A Glutamate-1-semialdehyd 33.5 13 0.00045 29.4 1.0 35 75-112 99-133 (434)
100 4a6r_A Omega transaminase; tra 33.1 10 0.00034 30.7 0.3 36 75-112 98-133 (459)
101 3g0t_A Putative aminotransfera 32.6 16 0.00054 28.7 1.4 41 63-111 86-126 (437)
102 2pb2_A Acetylornithine/succiny 32.4 6.6 0.00023 31.4 -0.9 34 75-112 103-136 (420)
103 1rv3_A Serine hydroxymethyltra 31.8 13 0.00046 30.6 0.8 40 62-110 89-130 (483)
104 1ax4_A Tryptophanase; tryptoph 31.7 8.8 0.0003 30.6 -0.3 33 76-112 81-113 (467)
105 3h7f_A Serine hydroxymethyltra 31.2 13 0.00043 30.0 0.6 37 75-114 95-131 (447)
106 2o1b_A Aminotransferase, class 30.7 23 0.00078 27.8 2.0 42 63-112 89-131 (404)
107 2eh6_A Acoat, acetylornithine 30.3 7.8 0.00027 29.7 -0.8 34 75-111 74-107 (375)
108 3ecd_A Serine hydroxymethyltra 30.2 22 0.00074 27.5 1.7 35 75-112 82-116 (425)
109 2ord_A Acoat, acetylornithine 30.2 9.8 0.00034 29.6 -0.3 34 75-112 86-119 (397)
110 3n0l_A Serine hydroxymethyltra 30.1 23 0.00079 27.4 1.9 39 63-112 71-109 (417)
111 1elu_A L-cysteine/L-cystine C- 28.6 27 0.00093 26.5 2.0 35 75-111 63-97 (390)
112 3gbx_A Serine hydroxymethyltra 28.5 25 0.00084 27.1 1.8 35 75-112 80-114 (420)
113 1iay_A ACC synthase 2, 1-amino 27.9 1E+02 0.0034 24.1 5.3 42 63-112 87-130 (428)
114 3e2y_A Kynurenine-oxoglutarate 27.8 18 0.00063 27.9 0.9 42 63-112 65-107 (410)
115 2fnu_A Aminotransferase; prote 27.8 30 0.001 26.2 2.1 33 75-111 36-68 (375)
116 1t3i_A Probable cysteine desul 27.7 54 0.0019 25.1 3.7 36 75-111 76-111 (420)
117 2x5d_A Probable aminotransfera 27.5 29 0.00098 27.1 2.0 41 63-111 79-120 (412)
118 1kmj_A Selenocysteine lyase; p 27.5 13 0.00043 28.5 -0.1 36 75-111 71-106 (406)
119 3tcm_A Alanine aminotransferas 26.8 23 0.0008 29.1 1.5 41 63-111 138-178 (500)
120 3gju_A Putative aminotransfera 26.8 12 0.00039 30.3 -0.4 36 75-112 99-134 (460)
121 3a2b_A Serine palmitoyltransfe 26.7 22 0.00076 27.5 1.2 34 75-112 92-125 (398)
122 3k28_A Glutamate-1-semialdehyd 26.5 21 0.00071 28.3 1.0 35 75-112 97-131 (429)
123 2cjg_A L-lysine-epsilon aminot 26.1 14 0.00049 29.8 0.0 36 75-111 105-140 (449)
124 2c81_A Glutamine-2-deoxy-scyll 25.9 15 0.00053 28.8 0.2 32 75-110 46-77 (418)
125 3b46_A Aminotransferase BNA3; 25.7 11 0.00039 30.2 -0.7 62 43-112 73-140 (447)
126 1n91_A ORF, hypothetical prote 25.1 47 0.0016 23.1 2.6 34 73-108 52-85 (108)
127 2e7u_A Glutamate-1-semialdehyd 24.6 16 0.00056 28.8 0.1 35 75-112 96-130 (424)
128 2l5y_A Stromal interaction mol 24.0 45 0.0015 24.5 2.4 18 72-89 82-99 (150)
129 3piu_A 1-aminocyclopropane-1-c 23.8 17 0.00059 28.7 0.1 43 63-113 90-134 (435)
130 2oat_A Ornithine aminotransfer 23.0 17 0.00058 29.3 -0.1 34 75-112 122-155 (439)
131 3dyd_A Tyrosine aminotransfera 22.8 15 0.0005 29.3 -0.5 37 75-112 104-140 (427)
132 1zod_A DGD, 2,2-dialkylglycine 22.6 21 0.00072 28.1 0.4 36 75-112 89-124 (433)
133 3euc_A Histidinol-phosphate am 22.4 20 0.00067 27.4 0.2 37 75-112 71-107 (367)
134 3esi_A Uncharacterized protein 22.0 21 0.00071 25.4 0.2 24 23-46 25-48 (129)
135 2cb1_A O-acetyl homoserine sul 21.6 20 0.00069 28.4 0.1 32 75-110 60-91 (412)
136 2k60_A Protein (stromal intera 21.4 56 0.0019 24.0 2.5 15 74-88 84-98 (150)
137 2rfv_A Methionine gamma-lyase; 21.3 24 0.00083 27.6 0.5 33 75-111 68-100 (398)
138 3nyt_A Aminotransferase WBPE; 21.2 23 0.00079 27.2 0.3 31 77-111 41-71 (367)
139 3b8x_A WBDK, pyridoxamine 5-ph 21.2 36 0.0012 26.3 1.5 31 77-111 40-70 (390)
140 3ke3_A Putative serine-pyruvat 21.1 20 0.00067 28.0 -0.1 33 75-110 39-71 (379)
141 3cai_A Possible aminotransfera 20.9 49 0.0017 25.4 2.2 32 75-108 73-104 (406)
142 3tqx_A 2-amino-3-ketobutyrate 20.9 25 0.00086 26.9 0.5 34 75-112 92-125 (399)
143 1jg8_A L-ALLO-threonine aldola 20.2 32 0.0011 25.9 0.9 33 76-112 43-75 (347)
144 1z7d_A Ornithine aminotransfer 20.1 23 0.0008 28.4 0.2 33 75-111 111-143 (433)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.82 E-value=4.4e-21 Score=161.84 Aligned_cols=99 Identities=33% Similarity=0.662 Sum_probs=91.5
Q ss_pred chHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHH
Q psy866 8 KPSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVR 82 (132)
Q Consensus 8 ~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~ 82 (132)
.+++++++.+.++|+.++|+|||||||++++++++++++|++++++|++++.|.. +||+ ++++|+++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~--------~v~~~l~~ 124 (475)
T 3k40_A 53 WQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEV--------VMMDWLGK 124 (475)
T ss_dssp HHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHH--------HHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHH--------HHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999877 9999 99999999
Q ss_pred HhCCCCCC-------CCCcccCCCCCcchhhhhcccccc
Q psy866 83 MVSDPKIY-------NPKIAVATPTSRRPTCLASSAEED 114 (132)
Q Consensus 83 ~lGlP~~~-------~G~i~tsGgs~anl~aL~~AR~~~ 114 (132)
++|+|+.+ ++++||+|||++|++|+.+||+..
T Consensus 125 ~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~ 163 (475)
T 3k40_A 125 MLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKK 163 (475)
T ss_dssp HTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHH
Confidence 99999764 233899999999999999999753
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.81 E-value=7e-21 Score=160.34 Aligned_cols=98 Identities=31% Similarity=0.595 Sum_probs=91.4
Q ss_pred chHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHH
Q psy866 8 KPSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVR 82 (132)
Q Consensus 8 ~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~ 82 (132)
.+++++++.+.++|+.++|+|||||||+|++++++++++|++++++|+++..|.. +||+ ++++|+++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~--------~v~~~l~~ 129 (481)
T 4e1o_A 58 WDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEM--------NVMDWLAK 129 (481)
T ss_dssp HHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHH--------HHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHH--------HHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999987 9999 99999999
Q ss_pred HhCCCCCC--------CCCcccCCCCCcchhhhhccccc
Q psy866 83 MVSDPKIY--------NPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 83 ~lGlP~~~--------~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
++|+|+.+ ++++||+|||++|++|+.+||+.
T Consensus 130 l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~ 168 (481)
T 4e1o_A 130 MLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKN 168 (481)
T ss_dssp HHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHH
Confidence 99999875 23489999999999999999985
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.68 E-value=2e-17 Score=137.85 Aligned_cols=97 Identities=33% Similarity=0.665 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHH
Q psy866 9 PSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRM 83 (132)
Q Consensus 9 ~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~ 83 (132)
+++++++.+.+.|+.++|+||+||||+++++++++.++|++++++|++...|.. ++|+ ++++|++++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~--------~~~~~la~l 125 (486)
T 1js3_A 54 EDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELET--------VMMDWLGKM 125 (486)
T ss_dssp HHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHH--------HHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999988876 8999 999999999
Q ss_pred hCCCCCC-------CCCcccCCCCCcchhhhhccccc
Q psy866 84 VSDPKIY-------NPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 84 lGlP~~~-------~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
+|+|..+ .+++||+|||+||++++.++|+.
T Consensus 126 ~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 126 LQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTK 162 (486)
T ss_dssp TTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred hCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHH
Confidence 9999642 23389999999999999999864
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.65 E-value=7.8e-17 Score=137.21 Aligned_cols=97 Identities=10% Similarity=0.075 Sum_probs=85.8
Q ss_pred chHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHH
Q psy866 8 KPSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVR 82 (132)
Q Consensus 8 ~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~ 82 (132)
.+++++++.+.+. +.++++||+||||+|++.+++++++|++++++|++.+.|.. ++|+ ++++|+++
T Consensus 76 ~~~~~~~~~~~~~-~~~~~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~--------~~~~~l~~ 146 (511)
T 3vp6_A 76 LEQILVDCRDTLK-YGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQ--------ITLKKMRE 146 (511)
T ss_dssp HHHHHHHHHHHHH-TSCCTTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHH--------HHHHHHHH
T ss_pred HHHHHHHHHHHhh-ccCCCCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHH--------HHHHHHHH
Confidence 3588888877664 55678999999999999999999999999999999999986 8999 99999999
Q ss_pred HhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 83 MVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 83 ~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
++|+|.....++||+|||+||++++.++|+.
T Consensus 147 ~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~ 177 (511)
T 3vp6_A 147 IVGWSSKDGDGIFSPGGAISNMYSIMAARYK 177 (511)
T ss_dssp HHTCCSSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCceEECCchHHHHHHHHHHHHHH
Confidence 9999965333389999999999999999984
No 5
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.59 E-value=9.2e-16 Score=128.66 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHH
Q psy866 9 PSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRM 83 (132)
Q Consensus 9 ~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~ 83 (132)
+++++++.+.++|+.++|+||+||+|++++..+++++++++..++|++.+.|.. ++|+ .+++|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~--------~~~~~la~~ 152 (497)
T 2qma_A 81 KSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQ--------KVVNWLCDK 152 (497)
T ss_dssp HHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHH--------HHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999888875 8999 999999999
Q ss_pred hCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 84 VSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 84 lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+|+|+...+ +||+|||++|.+++.+||+
T Consensus 153 ~g~~~~~~~-~~t~ggt~a~~~al~~ar~ 180 (497)
T 2qma_A 153 YDLSEKADG-IFTSGGTQSNQMGLMLARD 180 (497)
T ss_dssp TTCCTTCEE-EEESSHHHHHHHHHHHHHH
T ss_pred hCCCCCCCe-EEcCCchHHHHHHHHHHHH
Confidence 999865556 8999999999999999875
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.50 E-value=1.5e-14 Score=121.51 Aligned_cols=94 Identities=10% Similarity=0.057 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHH
Q psy866 9 PSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRM 83 (132)
Q Consensus 9 ~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~ 83 (132)
+++++++.+. +++..++.||+||+|++++..+.++++|++.+.+|++.+.|.. ++|+ ++++|++++
T Consensus 74 ~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~--------~~~~~la~~ 144 (504)
T 2okj_A 74 EQILVDCRDT-LKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQ--------ITLKKMREI 144 (504)
T ss_dssp HHHHHHHHHH-HHTSCCTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHHH-hhccCCCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHH--------HHHHHHHHH
Confidence 4788888665 4555666799999999999999999999999999999988875 8899 999999999
Q ss_pred hCCCC-CCCCCcccCCCCCcchhhhhcccc
Q psy866 84 VSDPK-IYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 84 lGlP~-~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+|+|. ...+ +||+|||++|.+++.++|+
T Consensus 145 ~g~~~~~~~~-~~t~ggtea~~~al~~~~~ 173 (504)
T 2okj_A 145 VGWSSKDGDG-IFSPGGAISNMYSIMAARY 173 (504)
T ss_dssp HTCCSSSCEE-EEESSHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCE-EEeCCcHHHHHHHHHHHHH
Confidence 99985 3345 8999999999999999986
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.39 E-value=1.9e-13 Score=115.45 Aligned_cols=93 Identities=10% Similarity=0.068 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHH
Q psy866 9 PSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRM 83 (132)
Q Consensus 9 ~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~ 83 (132)
+++++++.+ ++++..++.||+|++|++++..+.++++|++.+.+|++.+.|.. ++|. .+++|++++
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~--------~~~~~la~l 160 (515)
T 2jis_A 90 KQILERCRA-VIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEE--------EVLRKLRAL 160 (515)
T ss_dssp HHHHHHHHH-HHHHSCCTTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHH-HhcCCCCCCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHH--------HHHHHHHHH
Confidence 478888766 45555666799999999999999999999999999999888765 8899 999999999
Q ss_pred hCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 84 VSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 84 lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+|+| ...+ +||+|||++|++++.++|+
T Consensus 161 ~g~~-~~~~-~~t~ggtea~~~al~~ar~ 187 (515)
T 2jis_A 161 VGWS-SGDG-IFCPGGSISNMYAVNLARY 187 (515)
T ss_dssp HTCS-SCEE-EEESSHHHHHHHHHHHHHH
T ss_pred hCCC-CCCe-EEcCCcHHHHHHHHHHHHH
Confidence 9998 3445 8999999999999999985
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=98.96 E-value=4.3e-10 Score=92.77 Aligned_cols=91 Identities=4% Similarity=-0.126 Sum_probs=76.2
Q ss_pred chHHHHHHHHHH-cccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHH
Q psy866 8 KPSLIILLFHFL-SHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFV 81 (132)
Q Consensus 8 ~~~~l~~l~~~i-lp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~ 81 (132)
.+++++++.+.+ .++.++++||+|++.++ . ..++|+++.++|.+...|.. ++|+ .+++|++
T Consensus 25 ~~~v~~~~~~~~~~~~~~~~~~~~f~~~~~---~--~~v~e~~~~a~~~~~~~~~~~~~~~~l~~--------~~~~~la 91 (452)
T 2dgk_A 25 DDVAFQIINDELYLDGNARQNLATFCQTWD---D--ENVHKLMDLSINKNWIDKEEYPQSAAIDL--------RCVNMVA 91 (452)
T ss_dssp HHHHHHHHHHHGGGSCCCTTBCSCCSCCCC---C--HHHHHHHHHTTTCBTTCTTTCHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccCCCCeeCCCc---h--HHHHHHHHHHhccCCCChhhChhHHHHHH--------HHHHHHH
Confidence 358999999988 79999999999997221 1 45899999999987766654 8899 9999999
Q ss_pred HHhCCCCCC----CCCcccCCCCCcchhhhhcccc
Q psy866 82 RMVSDPKIY----NPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 82 ~~lGlP~~~----~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+++|.|... .+ ++|+|||++|.+++.++|+
T Consensus 92 ~l~g~~~~~~~~~~~-~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 92 DLWHAPAPKNGQAVG-TNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp HHTTCCCCTTSCCEE-EEESSHHHHHHHHHHHHHH
T ss_pred HHhCCCcccccCCce-EEeCCHHHHHHHHHHHHHH
Confidence 999998754 35 8999999999999999875
No 9
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.73 E-value=7.9e-10 Score=95.13 Aligned_cols=67 Identities=7% Similarity=0.000 Sum_probs=52.6
Q ss_pred CCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCC-C
Q psy866 28 HPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPT-S 101 (132)
Q Consensus 28 hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs-~ 101 (132)
-||||||++++ +.+||||++ |. .|.. .+|+ +++.|+.+++|+|+.+++ .+|+|+| +
T Consensus 67 ~~r~~g~~hg~----~~~~d~l~~--~~---~~~~~~~~~~~e~--------~~~~~~~~~lGlp~~~~~-~lV~GaT~~ 128 (450)
T 3bc8_A 67 ARRHYRFIHGI----GRSGDISAV--QP---KAAGSSLLNKITN--------SLVLNVIKLAGVHSVASC-FVVPMATGM 128 (450)
T ss_dssp HHHTTTCCSCB----CC---------CC---SBHHHHHHHHHHH--------HHHHHHHHHHTCTTCCEE-EEESSCHHH
T ss_pred cCCccceecch----hHHHHHHHh--Cc---cccCCcHHHHHHH--------HHHHHHHHhCCCCCCceE-EEECCHHHH
Confidence 48999999998 777899999 43 4444 8999 999999999999999887 8999998 9
Q ss_pred cchhhhhcccc
Q psy866 102 RRPTCLASSAE 112 (132)
Q Consensus 102 anl~aL~~AR~ 112 (132)
++.++|.++|+
T Consensus 129 ~~a~~L~aar~ 139 (450)
T 3bc8_A 129 SLTLCFLTLRH 139 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHcch
Confidence 99999999997
No 10
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.50 E-value=1.6e-08 Score=84.85 Aligned_cols=98 Identities=4% Similarity=-0.023 Sum_probs=82.0
Q ss_pred chHHHHHHHHHHcccCCCCCCCCceeeCCC-CCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHH
Q psy866 8 KPSLIILLFHFLSHQVTHWQHPRFHAYFPS-GNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFV 81 (132)
Q Consensus 8 ~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps-~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~ 81 (132)
..++++++.+.+.++..+|.||+|+|++.. .+.++..+.+.+....+.+...|.. ++|+ .+.+|++
T Consensus 78 ~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~--------~l~~~la 149 (514)
T 3mad_A 78 RAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEA--------EVVAMTA 149 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHH--------HHHHHHH
Confidence 347888888888899999999999999754 4667788999999888887665543 8899 9999999
Q ss_pred HHhCCC---CCCCCCcccCCCCCcchhhhhcccccc
Q psy866 82 RMVSDP---KIYNPKIAVATPTSRRPTCLASSAEED 114 (132)
Q Consensus 82 ~~lGlP---~~~~G~i~tsGgs~anl~aL~~AR~~~ 114 (132)
+++|.+ +...| ++|+||+++|..++.++|+..
T Consensus 150 ~~~g~~~~~~~v~~-~~t~ggt~a~~~al~a~~~~g 184 (514)
T 3mad_A 150 HMLGGDAAGGTVCG-TVTSGGTESLLLAMKTYRDWA 184 (514)
T ss_dssp HHTTGGGGTSCCEE-EEESSHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCccCCcce-EEcCcHHHHHHHHHHHHHHHh
Confidence 999998 44445 899999999999999998754
No 11
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.45 E-value=9.4e-08 Score=79.31 Aligned_cols=97 Identities=11% Similarity=0.026 Sum_probs=72.1
Q ss_pred cchHHHHHHHHHHc-ccCCCCCCCCceeeCCCCC-CHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHH
Q psy866 7 VKPSLIILLFHFLS-HQVTHWQHPRFHAYFPSGN-SYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSF 79 (132)
Q Consensus 7 ~~~~~l~~l~~~il-p~~~~~~hPrf~a~~ps~~-s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~W 79 (132)
...++++++.+... |..++|.||+|+|++..++ ....++.+.+....+.+...|.. ++|+ .+.+|
T Consensus 44 ~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~ 115 (497)
T 3mc6_A 44 PQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMES--------EVVSM 115 (497)
T ss_dssp CHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHH--------HHHHH
T ss_pred CHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHH--------HHHHH
Confidence 34588888887654 3678999999999965543 44445555555544445554543 8999 99999
Q ss_pred HHHHhCCC-CCCCCCcccCCCCCcchhhhhcccc
Q psy866 80 FVRMVSDP-KIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 80 l~~~lGlP-~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+++++|.+ +...+ ++++||++++..++.++|+
T Consensus 116 la~~~g~~~~~~~~-~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 116 VLRMFNAPSDTGCG-TTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp HHHHTTCCTTTCCE-EEESSHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCeE-EEcCcHHHHHHHHHHHHHH
Confidence 99999998 33345 8999999999999999986
No 12
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=98.20 E-value=6.6e-07 Score=75.68 Aligned_cols=92 Identities=9% Similarity=-0.038 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHH
Q psy866 9 PSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRM 83 (132)
Q Consensus 9 ~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~ 83 (132)
.++++.+.+.|. ...||+|+..-..+..++..+.|++.+++|.+...|.. ++|+ .+++|++++
T Consensus 40 ~~~~~~~~~~i~----l~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~--------~~~~~la~l 107 (502)
T 3hbx_A 40 EAAYQIINDELM----LDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQN--------RCVNMIAHL 107 (502)
T ss_dssp HHHHHHHHHHGG----GSCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHHHhc----cCCCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcChhHHHHHH--------HHHHHHHHH
Confidence 466777776653 23689865322222333445899999999998877754 8999 999999999
Q ss_pred hCCC----CCCCCCcccCCCCCcchhhhhccccc
Q psy866 84 VSDP----KIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 84 lGlP----~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
+|.| +...| ++|+||+++|..++.++|+.
T Consensus 108 ~g~~~~~~~~~~g-~~t~ggtea~~~a~~a~~~~ 140 (502)
T 3hbx_A 108 FNAPLEEAETAVG-VGTVGSSEAIMLAGLAFKRK 140 (502)
T ss_dssp TTCCCCSSCCCEE-EEESSHHHHHHHHHHHHHHH
T ss_pred hCCCcccccCCcc-eecCcHHHHHHHHHHHHHHH
Confidence 9998 23344 67999999999999888764
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=97.50 E-value=0.00011 Score=57.20 Aligned_cols=94 Identities=7% Similarity=-0.054 Sum_probs=69.7
Q ss_pred cchHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccch---H--HHHHHhhhcccchHHHHHHHH
Q psy866 7 VKPSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFS---W--VFELQERKRKDDLAYKRSFFV 81 (132)
Q Consensus 7 ~~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~s---w--~~elE~~~~~~~~~~vi~Wl~ 81 (132)
...++++++.+ +.+...++.+|+|+|+.++++.+. +.|.+...+...... + ..++++ .+.+|++
T Consensus 11 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~--v~~a~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~la 79 (397)
T 3f9t_A 11 SEKEILEELKK-YRSLDLKYEDGNIFGSMCSNVLPI--TRKIVDIFLETNLGDPGLFKGTKLLEE--------KAVALLG 79 (397)
T ss_dssp CHHHHHHHHHH-HHTTSCCGGGTCBCSCSCCCCCTH--HHHHHHHHTTCCTTSGGGBHHHHHHHH--------HHHHHHH
T ss_pred CHHHHHHHHHH-hhccCCCCCCCCeEEEecCCCcHH--HHHHHHHHHhhcCCCcccChhHHHHHH--------HHHHHHH
Confidence 34577777776 457778889999999998877654 356666666543221 1 127788 8999999
Q ss_pred HHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 82 RMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 82 ~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
+++|.+.. .. ++|+||+.++..++.+++..
T Consensus 80 ~~~~~~~~-~i-~~~~ggt~a~~~~~~~~~~~ 109 (397)
T 3f9t_A 80 SLLNNKDA-YG-HIVSGGTEANLMALRCIKNI 109 (397)
T ss_dssp HHTTCTTC-EE-EEESCHHHHHHHHHHHHHHH
T ss_pred HHhCCCCC-CE-EEecCcHHHHHHHHHHHHHH
Confidence 99998754 33 79999999999999988765
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=97.03 E-value=4.9e-05 Score=62.99 Aligned_cols=66 Identities=11% Similarity=0.036 Sum_probs=48.0
Q ss_pred CCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCC-
Q psy866 27 QHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPT- 100 (132)
Q Consensus 27 ~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs- 100 (132)
.+|+|++|+++.+ ..+|++. .| . .|.. ++|+ .+.+|+++++|.+.. + +||+|||
T Consensus 101 ~~~~~~~~~~~~~----~~~~~~~--~~--~-~~~~~~~~~~~~~--------~~~~~la~~~g~~~~--~-~~t~g~te 160 (456)
T 2z67_A 101 HEELSSGFCHGIG----RSGNLVD--PQ--P-KASGASIMYALTN--------KILESFFKQLGLNVH--A-IATPISTG 160 (456)
T ss_dssp HHHHTTTCTTCBS----BTTBTTS--CC--T-TBHHHHHHHHHHH--------HHHHHHHHHTTCCCE--E-EEESSCHH
T ss_pred cCccccccCCCcc----HHHHHHh--hC--c-ccccCcHHHHHHH--------HHHHHHHHHcCCCCC--E-EEeCcHHH
Confidence 3456888887654 3344444 22 2 4432 7888 999999999999865 5 8999999
Q ss_pred Ccchhhhhcccc
Q psy866 101 SRRPTCLASSAE 112 (132)
Q Consensus 101 ~anl~aL~~AR~ 112 (132)
++|+.++.++|.
T Consensus 161 ~a~~~al~~~~~ 172 (456)
T 2z67_A 161 MSISLCLSAARK 172 (456)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788888888765
No 15
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=94.08 E-value=0.044 Score=42.48 Aligned_cols=79 Identities=9% Similarity=-0.083 Sum_probs=53.0
Q ss_pred CCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcch
Q psy866 25 HWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRP 104 (132)
Q Consensus 25 ~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl 104 (132)
+...|+++.+.|++..++.-+-+.+.............++.. .+.+|+++++|.+....- ++|+||+.++.
T Consensus 18 ~~~~~~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~l~~~la~~~~~~~~~~v-~~~~gg~~al~ 88 (393)
T 3kgw_A 18 PLSVPTRLLLGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIME--------EIKQGIQYVFQTRNPLTL-VVSGSGHCAME 88 (393)
T ss_dssp CCCCCCCEECSSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHH--------HHHHHHHHHHTCCCSEEE-EESCCTTTHHH
T ss_pred CCCCccceeccCCCCCCCHHHHHHhcccccCcccHHHHHHHH--------HHHHHHHHHhCCCCCcEE-EEeCCcHHHHH
Confidence 446799999999987766666555544221111111125556 788999999999754333 68899999999
Q ss_pred hhhhcccc
Q psy866 105 TCLASSAE 112 (132)
Q Consensus 105 ~aL~~AR~ 112 (132)
.++.+..+
T Consensus 89 ~~~~~~~~ 96 (393)
T 3kgw_A 89 TALFNLLE 96 (393)
T ss_dssp HHHHHHCC
T ss_pred HHHHhcCC
Confidence 88776543
No 16
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=93.87 E-value=0.044 Score=45.38 Aligned_cols=93 Identities=9% Similarity=-0.142 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHcccCCCCCCCCceeeCCCCCCHHHHHHHHHHHH--hcCccch--HHH--HHHhhhcccchHHHHHHHH
Q psy866 8 KPSLIILLFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDA--IGCIGFS--WVF--ELQERKRKDDLAYKRSFFV 81 (132)
Q Consensus 8 ~~~~l~~l~~~ilp~~~~~~hPrf~a~~ps~~s~~s~lgD~L~sa--ln~~~~s--w~~--elE~~~~~~~~~~vi~Wl~ 81 (132)
..++++++.+.-..+..-+.+..|+| -......+.++-+++... +|+.... ... +++. .+.+|++
T Consensus 47 e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~--------~l~~~la 117 (474)
T 1wyu_B 47 ELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMW--------ELGEYLK 117 (474)
T ss_dssp HHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHH--------HHHHHHH
Confidence 34777777765544444455677777 222223344444444331 2332211 111 7777 8999999
Q ss_pred HHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 82 RMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 82 ~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+++|.+.. . ++++||++++.+++.++|.
T Consensus 118 ~~~g~~~~--~-~~~~ggt~a~~~al~~~~~ 145 (474)
T 1wyu_B 118 ALTGMDAI--T-LEPAAGAHGELTGILIIRA 145 (474)
T ss_dssp HHHTCSEE--E-CCCSSHHHHHHHHHHHHHH
T ss_pred HHHCCCce--e-ecChHHHHHHHHHHHHHHH
Confidence 99999752 3 6789999999999888863
No 17
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=91.56 E-value=0.12 Score=40.48 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=52.2
Q ss_pred CCCCCCCceeeCCCCCCHHHHHHHHHHHHh-cCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCc
Q psy866 24 THWQHPRFHAYFPSGNSYPSVLADMLSDAI-GCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSR 102 (132)
Q Consensus 24 ~~~~hPrf~a~~ps~~s~~s~lgD~L~sal-n~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~a 102 (132)
....+|+++-+.|++..++.-+.+.+...+ +.....+ .++.. .+.+|+++++|.+....- +++.||+.+
T Consensus 7 ~~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~~~~~~~~-~~~~~--------~~~~~la~~~~~~~~~~v-~~~~sgt~a 76 (411)
T 3nnk_A 7 SQLNPPSRLLMGPGPINADPRVLRAMSSQLIGQYDPAM-THYMN--------EVMALYRGVFRTENRWTM-LVDGTSRAG 76 (411)
T ss_dssp CSCCCCCCEEESSSCCCCCHHHHHHHTSCCCCTTCHHH-HHHHH--------HHHHHHHHHHTCCCSEEE-EEESCHHHH
T ss_pred cccCCccceeecCCCCCCCHHHHHHhhccccccccHHH-HHHHH--------HHHHHHHHHhCCCCCcEE-EECCCcHHH
Confidence 355789999999999877666666555432 2111111 14555 788999999999854322 567788988
Q ss_pred chhhhhccc
Q psy866 103 RPTCLASSA 111 (132)
Q Consensus 103 nl~aL~~AR 111 (132)
+..++.+.-
T Consensus 77 l~~~~~~~~ 85 (411)
T 3nnk_A 77 IEAILVSAI 85 (411)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 888776653
No 18
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=90.18 E-value=0.081 Score=40.49 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=47.6
Q ss_pred CceeeCCCCCCHHHHHHHHHHHHh-cCc---cchHHH--HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcc
Q psy866 30 RFHAYFPSGNSYPSVLADMLSDAI-GCI---GFSWVF--ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRR 103 (132)
Q Consensus 30 rf~a~~ps~~s~~s~lgD~L~sal-n~~---~~sw~~--elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~an 103 (132)
+++-|.|++...+.-+-+.+..++ +.. ...... ++.+ .+.+++++++|.++...- ++|+||+.++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~la~~~g~~~~~~v-~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYK--------TASDNLKTLLELPSNYEV-LFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHH--------HHHHHHHHHTTCCTTEEE-EEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHH--------HHHHHHHHHhCCCCCcEE-EEeCCchHHH
Confidence 467788988766555554444443 332 111111 5556 789999999999754434 7889999999
Q ss_pred hhhhhccc
Q psy866 104 PTCLASSA 111 (132)
Q Consensus 104 l~aL~~AR 111 (132)
..++.+..
T Consensus 75 ~~~~~~l~ 82 (362)
T 3ffr_A 75 ERIIQNCV 82 (362)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 88776544
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=87.86 E-value=0.23 Score=38.91 Aligned_cols=79 Identities=10% Similarity=-0.001 Sum_probs=48.9
Q ss_pred cCCCCCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHH-HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCC
Q psy866 22 QVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWV-FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPT 100 (132)
Q Consensus 22 ~~~~~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~-~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs 100 (132)
+.....+|+++-|.|++...+..+.+.+....- ...... .++.. .+.+|+++++|.+....- +++.||+
T Consensus 3 ~~~~~~~~~~~~~~p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~--------~l~~~la~~~g~~~~~~~-~~~~s~t 72 (416)
T 3isl_A 3 GRRELCTPLRTIMTPGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMN--------ETMEMLRELFQTKNRWAY-PIDGTSR 72 (416)
T ss_dssp --CCCCCCCCEECSSSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHH--------HHHHHHHHHTTCCCSEEE-EEESCHH
T ss_pred CccccCcccceeecCCCcCcCHHHHHHhcccCC-CCccHHHHHHHH--------HHHHHHHHHhCCCCCcEE-EecCcHH
Confidence 344566888899999887666555554443211 111111 25666 789999999998754321 3667888
Q ss_pred Ccchhhhhcc
Q psy866 101 SRRPTCLASS 110 (132)
Q Consensus 101 ~anl~aL~~A 110 (132)
.++..++.+.
T Consensus 73 ~al~~~~~~l 82 (416)
T 3isl_A 73 AGIEAVLASV 82 (416)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8887766544
No 20
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=85.92 E-value=0.22 Score=37.73 Aligned_cols=71 Identities=8% Similarity=-0.038 Sum_probs=42.6
Q ss_pred eCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 34 YFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 34 ~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
|-|++...+.-+-|.+...+.........+.+. .+.+|+++++|.+....-.++|+||+.++..++.+.++
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~ 74 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRGHLDPEVLRVNR--------AIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR 74 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHH--------HHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC
T ss_pred CCCCCCCCCHHHHHHHhcccccccCHHHHHHHH--------HHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC
Confidence 445554444444444444443321111125566 88999999999862222237889999999988877764
No 21
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=84.95 E-value=0.32 Score=37.54 Aligned_cols=75 Identities=5% Similarity=-0.131 Sum_probs=48.1
Q ss_pred CCceeeCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCC--CCCcccCCCCCcchhh
Q psy866 29 PRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIY--NPKIAVATPTSRRPTC 106 (132)
Q Consensus 29 Prf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~--~G~i~tsGgs~anl~a 106 (132)
|+++.|.|++...+..+-|.+................. .+++++++.++..... .-.++|+||++++..+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQ--------RVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHH--------HHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccccCCHHHHHHHH--------HHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHH
Confidence 77789999987776666666655443321111113344 6778888888864211 1237899999999998
Q ss_pred hhccc
Q psy866 107 LASSA 111 (132)
Q Consensus 107 L~~AR 111 (132)
+.+..
T Consensus 76 ~~~~~ 80 (385)
T 2bkw_A 76 ASNFI 80 (385)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 87653
No 22
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=84.43 E-value=0.43 Score=36.67 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~A 110 (132)
.+.+|+++++|.+....-.++|+||+.++. ++.+.
T Consensus 39 ~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~ 73 (384)
T 3zrp_A 39 YSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL 73 (384)
T ss_dssp HHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG
T ss_pred HHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh
Confidence 789999999999863233478999999998 76654
No 23
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=84.21 E-value=0.49 Score=36.78 Aligned_cols=76 Identities=12% Similarity=-0.001 Sum_probs=48.9
Q ss_pred CCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Q psy866 27 QHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTC 106 (132)
Q Consensus 27 ~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~a 106 (132)
..|+.+.+.+++...+..+.|.+...+...-......... .+.+++++++|.+....- ++|+||+.++..+
T Consensus 16 ~~~~~~~~~~g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~l~~~la~~~g~~~~~~i-~~~~g~t~a~~~~ 86 (393)
T 2huf_A 16 VTPNKLLMGPGPSNAPQRVLDAMSRPILGHLHPETLKIMD--------DIKEGVRYLFQTNNIATF-CLSASGHGGMEAT 86 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTSCCCCTTSHHHHHHHH--------HHHHHHHHHHTCCCSEEE-EESSCHHHHHHHH
T ss_pred CCCCeEEecCCCCCCCHHHHHHHHhhhccCCCHHHHHHHH--------HHHHHHHHHhCCCCCcEE-EEcCcHHHHHHHH
Confidence 4467777777775555555555555443311111124555 788899999998653223 6889999999998
Q ss_pred hhccc
Q psy866 107 LASSA 111 (132)
Q Consensus 107 L~~AR 111 (132)
+.+..
T Consensus 87 ~~~~~ 91 (393)
T 2huf_A 87 LCNLL 91 (393)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 87653
No 24
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=84.20 E-value=0.42 Score=36.93 Aligned_cols=71 Identities=4% Similarity=0.004 Sum_probs=43.2
Q ss_pred eeCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcc-cCCCCCcchhhhhccc
Q psy866 33 AYFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIA-VATPTSRRPTCLASSA 111 (132)
Q Consensus 33 a~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~-tsGgs~anl~aL~~AR 111 (132)
-|-|++..++.-+-+.+...+.........++.+ .+.+|+++++|.|....- ++ |+||++++..++.+..
T Consensus 22 ~~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~~~~~la~~~g~~~~~~~-i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 22 NFTVGPVMSSEEVRAIGAEQVPYFRTTEFSSTML--------ENEKFMLEYAKAPEGSKA-VFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp ECSSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHH--------HHHHHHHHHHTCCTTCEE-EEESSCHHHHHHHHHHHHC
T ss_pred eecCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHH--------HHHHHHHHHhCCCCCceE-EEEcCChhHHHHHHHHhcc
Confidence 3467765555545555544332211111115555 788999999999865444 45 6788999988876654
Q ss_pred c
Q psy866 112 E 112 (132)
Q Consensus 112 ~ 112 (132)
+
T Consensus 93 ~ 93 (376)
T 3f0h_A 93 T 93 (376)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=84.06 E-value=0.44 Score=37.68 Aligned_cols=86 Identities=14% Similarity=0.008 Sum_probs=48.6
Q ss_pred HHHcccCCCCC--CCCceeeCCCCCCHHHHHHHHHHHHhcCcc---chHHH--HHHhhhcccchHHHHHHHHHHhCCCCC
Q psy866 17 HFLSHQVTHWQ--HPRFHAYFPSGNSYPSVLADMLSDAIGCIG---FSWVF--ELQERKRKDDLAYKRSFFVRMVSDPKI 89 (132)
Q Consensus 17 ~~ilp~~~~~~--hPrf~a~~ps~~s~~s~lgD~L~saln~~~---~sw~~--elE~~~~~~~~~~vi~Wl~~~lGlP~~ 89 (132)
+..-|+....+ +|..+-+-+++..++--+-+.+....|... ..+.. ++.+ .+.+++++++|.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~la~~~g~~~~ 96 (398)
T 2fyf_A 25 DQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVG--------RVRSGLAELFSLPDG 96 (398)
T ss_dssp -----CCCCCGGGSCSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHH--------HHHHHHHHHTTCCTT
T ss_pred hhcCcCcCCccccccCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHH--------HHHHHHHHHhCCCCC
Confidence 34444433333 566777777776555444444443211111 11111 4555 799999999999743
Q ss_pred CCCCcc-cCCCCCcchhhhhccc
Q psy866 90 YNPKIA-VATPTSRRPTCLASSA 111 (132)
Q Consensus 90 ~~G~i~-tsGgs~anl~aL~~AR 111 (132)
..- ++ |+||++++..++.+..
T Consensus 97 ~~i-~~~t~g~t~al~~~~~~l~ 118 (398)
T 2fyf_A 97 YEV-ILGNGGATAFWDAAAFGLI 118 (398)
T ss_dssp CEE-EEEETCHHHHHHHHHHHTC
T ss_pred ceE-EEeCCchhHHHHHHHHHhc
Confidence 333 67 8999999988777653
No 26
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=82.88 E-value=0.28 Score=42.91 Aligned_cols=36 Identities=11% Similarity=0.054 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCC-Ccchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPT-SRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs-~anl~aL~~AR~ 112 (132)
.+++||+++ |+|..... .++.|+| +...++|+++|.
T Consensus 121 l~ld~L~~~-G~~~~~~~-flVnGsTgg~lamilaa~r~ 157 (501)
T 3hl2_A 121 LVLDIIKLA-GVHTVANC-FVVPMATGMSLTLCFLTLRH 157 (501)
T ss_dssp HHHHHHHHT-TCTTCCEE-EEESSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCCCcE-EEECcHHHHHHHHHHHHcCc
Confidence 999999999 99988766 7888888 455556667675
No 27
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=82.27 E-value=0.67 Score=35.24 Aligned_cols=61 Identities=5% Similarity=-0.025 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCccchHH-HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 43 SVLADMLSDAIGCIGFSWV-FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 43 s~lgD~L~saln~~~~sw~-~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
..+.|.+...++....... .++++ .+.+|+++++|.+.. .. ++|+||+.++..++.++++.
T Consensus 28 ~~v~~a~~~~~~~~~~~~g~~~~~~--------~~~~~l~~~~g~~~~-~v-~~~~g~t~a~~~~~~~~~~~ 89 (359)
T 1svv_A 28 PKILDLMARDNMTQHAGYGQDSHCA--------KAARLIGELLERPDA-DV-HFISGGTQTNLIACSLALRP 89 (359)
T ss_dssp HHHHHHHHHHTTCCCCSTTCSHHHH--------HHHHHHHHHHTCTTS-EE-EEESCHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhhccccccccHHHH--------HHHHHHHHHhCCCCc-cE-EEeCCchHHHHHHHHHHhCC
Confidence 4455666666654322211 26777 889999999996543 23 78999999999999888764
No 28
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=82.15 E-value=0.69 Score=35.95 Aligned_cols=77 Identities=5% Similarity=-0.038 Sum_probs=49.9
Q ss_pred CCCCCceeeCCCCCCHHHHHHHHHHHHhcCccchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchh
Q psy866 26 WQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPT 105 (132)
Q Consensus 26 ~~hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~ 105 (132)
...|+.+.+.+++..++..+.|.+...+...-......... .+.+.+++.+|.+....- ++|+||+.++..
T Consensus 14 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------~l~~~la~~~~~~~~~~v-~~~~g~t~al~~ 84 (396)
T 2ch1_A 14 LIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMD--------EVKDGLRYIFQTENRATM-CVSGSAHAGMEA 84 (396)
T ss_dssp CCCCCCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHH--------HHHHHHHHHHTCCCSCEE-EESSCHHHHHHH
T ss_pred CCCCcceeecCCCCCCCHHHHHHhccccccCCChhHHHHHH--------HHHHHHHHHhCCCCCcEE-EECCcHHHHHHH
Confidence 45577788888877666556665555443211111113445 678899999998754223 688899999998
Q ss_pred hhhccc
Q psy866 106 CLASSA 111 (132)
Q Consensus 106 aL~~AR 111 (132)
++.+..
T Consensus 85 ~~~~~~ 90 (396)
T 2ch1_A 85 MLSNLL 90 (396)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 877653
No 29
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=81.28 E-value=0.98 Score=35.12 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=46.5
Q ss_pred CCCceeeCCCCCCHHHHHHHHHHHHhcCccchH-HHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Q psy866 28 HPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSW-VFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTC 106 (132)
Q Consensus 28 hPrf~a~~ps~~s~~s~lgD~L~saln~~~~sw-~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~a 106 (132)
.|+-+-+.+++...+.-+.|.+...+.. .... ..++.+ .+.+|+++++|.+..+.- ++|+||+.++..+
T Consensus 32 ~~~~~l~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~--------~~~~~la~~~g~~~~~~v-~~t~g~t~al~~~ 101 (393)
T 1vjo_A 32 VPSRLLLGPGPSNAHPSVLQAMNVSPVG-HLDPAFLALMD--------EIQSLLRYVWQTENPLTI-AVSGTGTAAMEAT 101 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHHSSCCCC-TTSHHHHHHHH--------HHHHHHHHHHTCCCSCEE-EESSCHHHHHHHH
T ss_pred CccceeccCCCCCCCHHHHHHHhccccc-ccCHHHHHHHH--------HHHHHHHHHhCCCCCcEE-EEeCchHHHHHHH
Confidence 3444444455544444455555554432 1111 115666 889999999999644233 7889999999988
Q ss_pred hhcccc
Q psy866 107 LASSAE 112 (132)
Q Consensus 107 L~~AR~ 112 (132)
+.+..+
T Consensus 102 ~~~~~~ 107 (393)
T 1vjo_A 102 IANAVE 107 (393)
T ss_dssp HHHHCC
T ss_pred HHhccC
Confidence 877654
No 30
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=76.56 E-value=1 Score=34.86 Aligned_cols=43 Identities=2% Similarity=-0.215 Sum_probs=33.3
Q ss_pred HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 62 FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 62 ~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.++++ .+.+|+.+.+|.+-.....++|+||+.++..++.+..+
T Consensus 65 ~~l~~--------~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~ 107 (391)
T 3dzz_A 65 AEYYK--------AVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTS 107 (391)
T ss_dssp HHHHH--------HHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred HHHHH--------HHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCC
Confidence 37888 99999999999764444447888999999887776643
No 31
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=76.10 E-value=1.1 Score=34.01 Aligned_cols=68 Identities=9% Similarity=-0.088 Sum_probs=42.6
Q ss_pred eCCCCCCHHHHHHHHHHHHhcCccchHHH-HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 34 YFPSGNSYPSVLADMLSDAIGCIGFSWVF-ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 34 ~~ps~~s~~s~lgD~L~saln~~~~sw~~-elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+.|++..++.-+-|.+...+.... .... .... .+.+++++++|.+.. .. ++|+||+.++..++.+..+
T Consensus 5 ~~~~p~~~~~~v~~a~~~~~~~~~-~~~~~~~~~--------~l~~~la~~~g~~~~-~i-~~~~g~t~a~~~~~~~~~~ 73 (352)
T 1iug_A 5 LTPGPVRLHPKALEALARPQLHHR-TEAAREVFL--------KARGLLREAFRTEGE-VL-ILTGSGTLAMEALVKNLFA 73 (352)
T ss_dssp CSSSSCCCCHHHHHHHHSCCCCTT-SHHHHHHHH--------HHHHHHHHHHTCSSE-EE-EEESCHHHHHHHHHHHHCC
T ss_pred ccCCCCCCCHHHHHHhccCCCCcc-CHHHHHHHH--------HHHHHHHHHhCCCCc-eE-EEcCchHHHHHHHHHhccC
Confidence 345554444445566655554321 1111 4455 788899999998742 23 7888999999988776543
No 32
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=74.40 E-value=1.2 Score=33.93 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
.+.+|+++++| + .... ++|+||++++..++.++++.
T Consensus 47 ~l~~~la~~~g-~-~~~v-~~~~~gt~a~~~al~~~~~~ 82 (356)
T 1v72_A 47 QVKRKFCEIFE-R-DVEV-FLVPTGTAANALCLSAMTPP 82 (356)
T ss_dssp HHHHHHHHHHT-S-CCEE-EEESCHHHHHHHHHHTSCCT
T ss_pred HHHHHHHHHhC-C-CCcE-EEeCCccHHHHHHHHHhcCC
Confidence 78889999999 4 2223 78999999999999988764
No 33
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=73.25 E-value=5 Score=32.21 Aligned_cols=30 Identities=7% Similarity=-0.044 Sum_probs=22.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTC 106 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~a 106 (132)
...+++++++|.+.. +. ++++|++.++...
T Consensus 112 ~~~~~la~~~g~~~~-~i-~~~~g~taa~ea~ 141 (438)
T 1wyu_A 112 EYQTMIAELAGLEIA-NA-SMYDGATALAEGV 141 (438)
T ss_dssp HHHHHHHHHHTSSEE-CS-CBSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcc-ce-EEeCcHHHHHHHH
Confidence 899999999999743 44 6888988543333
No 34
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=72.54 E-value=7.5 Score=30.03 Aligned_cols=42 Identities=10% Similarity=-0.077 Sum_probs=32.9
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCC-CcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNP-KIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G-~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-.... .++|+||+.++..++.+..+
T Consensus 67 ~l~~--------~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~ 109 (389)
T 1gd9_A 67 ELRE--------AIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK 109 (389)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCC
Confidence 8888 999999999997533333 47899999999988877643
No 35
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=72.29 E-value=1.6 Score=33.50 Aligned_cols=71 Identities=3% Similarity=-0.171 Sum_probs=42.6
Q ss_pred CCceeeCCCCCCHHHHHHHHHHHHhcCccchHH-HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhh
Q psy866 29 PRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWV-FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCL 107 (132)
Q Consensus 29 Prf~a~~ps~~s~~s~lgD~L~saln~~~~sw~-~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL 107 (132)
..|+.+ +++...+..+.|.+...+.. ..... .++.+ .+.+|+++++|.+ ...-.++|+||+.++..++
T Consensus 20 ~~~l~~-~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~--------~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~ 88 (386)
T 2dr1_A 20 KYKLFT-AGPVACFPEVLEIMKVQMFS-HRSKEYRKVHM--------DTVERLREFLEVE-KGEVLLVPSSGTGIMEASI 88 (386)
T ss_dssp CSEECC-SSSCCCCHHHHHHTTSCCCC-TTSHHHHHHHH--------HHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHH
T ss_pred cceeec-CCCcCCcHHHHHHHhccccc-ccCHHHHHHHH--------HHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHH
Confidence 345544 44433333344444444322 11111 26667 8999999999997 2222368899999999988
Q ss_pred hcc
Q psy866 108 ASS 110 (132)
Q Consensus 108 ~~A 110 (132)
.+.
T Consensus 89 ~~l 91 (386)
T 2dr1_A 89 RNG 91 (386)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 36
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=71.75 E-value=1.7 Score=37.01 Aligned_cols=41 Identities=2% Similarity=-0.039 Sum_probs=31.5
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCC-CCCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKI-YNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~-~~G~i~tsGgs~anl~aL~~AR 111 (132)
++|+ .+++++++++|.... ++-.+++++|++||..++.+.-
T Consensus 100 ~lE~--------~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~ 141 (490)
T 2a7v_A 100 EIEL--------LCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL 141 (490)
T ss_dssp HHHH--------HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC
T ss_pred HHHH--------HHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHc
Confidence 8888 899999999998753 2122567788999998876553
No 37
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=70.03 E-value=2.3 Score=33.82 Aligned_cols=44 Identities=7% Similarity=-0.041 Sum_probs=34.4
Q ss_pred HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 62 FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 62 ~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
.++++ .+.+|+.+..|++-...-.+|++|++.++..++.+.+..
T Consensus 99 ~~l~~--------~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~ 142 (421)
T 3l8a_A 99 DDLYQ--------AVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEK 142 (421)
T ss_dssp HHHHH--------HHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCT
T ss_pred HHHHH--------HHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCC
Confidence 47778 899999999997644344478889999999988877654
No 38
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=69.12 E-value=5.5 Score=30.16 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+|+++++|.+.. .- ++|+|++.++..++.+..
T Consensus 47 ~~~~~la~~~~~~~~-~i-~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 47 EAREKVAKLVNGGGG-TV-VFTSGATEANNLAIIGYA 81 (382)
T ss_dssp HHHHHHHHHTTCTTE-EE-EEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC-eE-EEECCchHHHHHHHHHhh
Confidence 788999999998643 23 789999999988776654
No 39
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=67.73 E-value=5.9 Score=30.23 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+++++++|.+.. .. ++|+||+.++..++.+.+
T Consensus 47 ~l~~~la~~~g~~~~-~v-~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 47 EAREKVAKLVNGGGG-TV-VFTSGATEANNLAIIGYA 81 (382)
T ss_dssp HHHHHHHHHHTCTTE-EE-EEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC-eE-EEcCchHHHHHHHHHHHH
Confidence 788899999998643 23 788999999999888775
No 40
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=67.18 E-value=1.7 Score=33.47 Aligned_cols=42 Identities=5% Similarity=-0.107 Sum_probs=31.7
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+++.+|.+-...-.++|+||+.++..++.+..+
T Consensus 63 ~~~~--------~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~ 104 (383)
T 3kax_A 63 NIGD--------IICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTK 104 (383)
T ss_dssp THHH--------HHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCC
Confidence 6777 89999999999653333447888999998887766543
No 41
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=67.06 E-value=0.63 Score=35.40 Aligned_cols=38 Identities=11% Similarity=0.103 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++++|.|....-.++|+||++++..++.+.++
T Consensus 41 ~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~ 78 (366)
T 1m32_A 41 QIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALG 78 (366)
T ss_dssp HHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcC
Confidence 67778899999543322347899999999998888764
No 42
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=65.91 E-value=3.6 Score=32.02 Aligned_cols=44 Identities=7% Similarity=-0.124 Sum_probs=32.8
Q ss_pred HHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 61 VFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 61 ~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
..++++ .+.+|+.+..|.+-.....++|+||+.++..++.+..+
T Consensus 68 ~~~l~~--------~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~ 111 (399)
T 1c7n_A 68 TEEYKK--------TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTK 111 (399)
T ss_dssp CHHHHH--------HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred cHHHHH--------HHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcC
Confidence 347888 88999999999654333447888999999887776544
No 43
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=63.91 E-value=3.6 Score=31.63 Aligned_cols=43 Identities=7% Similarity=-0.166 Sum_probs=32.7
Q ss_pred HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 62 FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 62 ~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.++++ .+.+|+++.+|.+-...-.++|+||+.++..++.+..+
T Consensus 70 ~~~~~--------~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~ 112 (391)
T 4dq6_A 70 DSYNE--------SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTK 112 (391)
T ss_dssp HHHHH--------HHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred HHHHH--------HHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCC
Confidence 37788 89999999999653333447888999999887776644
No 44
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=62.80 E-value=5.1 Score=31.79 Aligned_cols=42 Identities=7% Similarity=-0.139 Sum_probs=33.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-...-.++|+|++.++..++.+..+
T Consensus 87 ~lr~--------~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~ 128 (444)
T 3if2_A 87 AFID--------ALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG 128 (444)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE
T ss_pred HHHH--------HHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC
Confidence 7888 89999999988764444458899999999888766644
No 45
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=60.95 E-value=2.6 Score=33.88 Aligned_cols=34 Identities=3% Similarity=-0.061 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+|+++.++.+.. .+||+||+++|..++.++|
T Consensus 95 ~la~~l~~~~~~~~~---v~~~~ggseA~~~al~~~~ 128 (452)
T 3n5m_A 95 KLAEKLNEWLGGEYV---IFFSNSGSEANETAFKIAR 128 (452)
T ss_dssp HHHHHHHHHHTSCEE---EEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCce---EEEeCchHHHHHHHHHHHH
Confidence 778899999876544 5899999999999999998
No 46
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=60.88 E-value=6.1 Score=30.42 Aligned_cols=34 Identities=15% Similarity=-0.023 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~A 110 (132)
...+++++++|.+.. -.++|+||+.++..++.+.
T Consensus 46 ~l~~~la~~~g~~~~--~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 46 KVVDKAQKAMRLSNK--PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp HHHHHHHHHTTCSSC--CEEESSCTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC--EEEEeCCchHHHHHHHHHh
Confidence 788899999998632 2378899999998887765
No 47
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=60.03 E-value=6.5 Score=30.37 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+|+++++|.++. . .++|+||+.++..++.+.+
T Consensus 67 ~l~~~la~~~~~~~~-~-v~~~~g~t~al~~~~~~l~ 101 (400)
T 3vax_A 67 RAREYLASTVSAEPD-E-LIFTSGATESNNIALLGLA 101 (400)
T ss_dssp HHHHHHHHHTTCCGG-G-EEEESCHHHHHHHHHHTTH
T ss_pred HHHHHHHHHcCCCCC-c-EEEeCCHHHHHHHHHHHHH
Confidence 789999999998643 2 3789999999998888775
No 48
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=59.92 E-value=5.5 Score=30.95 Aligned_cols=60 Identities=3% Similarity=0.009 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCccchHHH-----HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 45 LADMLSDAIGCIGFSWVF-----ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 45 lgD~L~saln~~~~sw~~-----elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
+-|.+...+......|.. ++++ .+.+|+.+..|.+-.....++|+||+.++..++.+..+
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~--------~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~ 113 (391)
T 3h14_A 49 AVEALAKSLETDALGYTVALGLPALRQ--------RIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFD 113 (391)
T ss_dssp HHHHHHHHHC----------CCHHHHH--------HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhcCCCCCCCCCChHHHHH--------HHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcC
Confidence 455555555432222222 7788 89999999999765444557888999999887766543
No 49
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=58.55 E-value=3.3 Score=33.11 Aligned_cols=34 Identities=3% Similarity=-0.053 Sum_probs=23.7
Q ss_pred HHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 76 KRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 76 vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
..+++++++|.. .. +||+|||+||..++.++++.
T Consensus 79 l~~~la~~~~~~---~v-~~t~~gt~A~~~al~~~~~~ 112 (467)
T 2oqx_A 79 LAESVKNIFGYQ---YT-IPTHQGRGAEQIYIPVLIKK 112 (467)
T ss_dssp HHHHHHHHHCCS---EE-EEEC--CCSHHHHHHHHHHH
T ss_pred HHHHHHHHhCcC---cE-EEcCCcHHHHHHHHHHHhcc
Confidence 344677777753 23 78999999999999988764
No 50
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=58.47 E-value=3.7 Score=32.13 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+|+++++|.+.. . .++|+||+.++..++.+.+
T Consensus 72 ~l~~~la~~~~~~~~-~-v~~~~ggt~a~~~a~~~l~ 106 (423)
T 3lvm_A 72 IARNQIADLVGADPR-E-IVFTSGATESDNLAIKGAA 106 (423)
T ss_dssp HHHHHHHHHHTCCGG-G-EEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-e-EEEeCChHHHHHHHHHHHH
Confidence 788999999998643 2 3789999999999887665
No 51
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=61.96 E-value=2.2 Score=33.41 Aligned_cols=42 Identities=7% Similarity=-0.122 Sum_probs=31.7
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-...-.++|+||+.++..++.+..+
T Consensus 70 ~l~~--------~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~ 111 (392)
T 3b1d_A 70 ELLQ--------AVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTK 111 (392)
Confidence 6777 88899999888654333447888999999887776643
No 52
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=55.90 E-value=4.2 Score=31.72 Aligned_cols=35 Identities=3% Similarity=-0.064 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
...+|+++.+| ++. .+|++||+++|..++.++|..
T Consensus 82 ~l~~~la~~~~-~~~---v~~~~gg~ea~~~al~~~~~~ 116 (395)
T 3nx3_A 82 AAAKNLAKASA-LER---VFFTNSGTESIEGAMKTARKY 116 (395)
T ss_dssp HHHHHHHHHHT-CSE---EEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCe---EEEeCCHHHHHHHHHHHHHHH
Confidence 67778999988 332 378999999999999888643
No 53
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=55.49 E-value=13 Score=28.65 Aligned_cols=42 Identities=7% Similarity=0.040 Sum_probs=31.5
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCC-CCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIY-NPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~-~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+++.+|.+-.. .-.++|+||+.++..++.+..+
T Consensus 82 ~l~~--------~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 124 (407)
T 3nra_A 82 GIRD--------LLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVA 124 (407)
T ss_dssp HHHH--------HHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCC
Confidence 6777 8899999999985321 2337889999999888766543
No 54
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=55.47 E-value=5.9 Score=30.40 Aligned_cols=35 Identities=6% Similarity=0.105 Sum_probs=26.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLAS 109 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~ 109 (132)
.+.+++++++|.|+.+.-.++|+||+.++..++.+
T Consensus 53 ~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~ 87 (362)
T 2c0r_A 53 EAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMN 87 (362)
T ss_dssp HHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHh
Confidence 78999999999976433224668999998876654
No 55
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=54.62 E-value=3.6 Score=31.90 Aligned_cols=42 Identities=10% Similarity=-0.139 Sum_probs=33.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-.....++|+||++++..++.+..+
T Consensus 71 ~l~~--------~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~ 112 (388)
T 1j32_A 71 RLRE--------AIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIE 112 (388)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcC
Confidence 7888 99999999999753333447888999999998876644
No 56
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=54.52 E-value=4 Score=32.13 Aligned_cols=42 Identities=10% Similarity=-0.079 Sum_probs=32.9
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCC-CCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYN-PKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~-G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-... -.++|+||+.++..++.+..+
T Consensus 66 ~l~~--------~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~ 108 (411)
T 2o0r_A 66 PLRR--------AIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVE 108 (411)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcC
Confidence 7888 99999999999763332 347888999999888776644
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=54.39 E-value=5.7 Score=30.79 Aligned_cols=41 Identities=12% Similarity=-0.037 Sum_probs=31.7
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCC-CCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYN-PKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~-G~i~tsGgs~anl~aL~~AR 111 (132)
++++ .+.+|+.+..|.+-... ..++|+|++.++..++.+..
T Consensus 71 ~l~~--------~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~ 112 (386)
T 1u08_A 71 ALRE--------AIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV 112 (386)
T ss_dssp HHHH--------HHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC
Confidence 7888 99999999999764333 44788899999888776653
No 58
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=53.31 E-value=3 Score=32.50 Aligned_cols=35 Identities=6% Similarity=0.031 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
...+|+++.+| ++. .+|++||++++..++.+++..
T Consensus 82 ~l~~~la~~~g-~~~---v~~~~~gt~a~~~al~~~~~~ 116 (392)
T 3ruy_A 82 PWYEKVAKLTN-KEM---VLPMNTGAEAVETAIKTARRW 116 (392)
T ss_dssp HHHHHHHHHHT-CSE---EEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCE---EEEeCcHHHHHHHHHHHHHHh
Confidence 67779999998 332 378999999999999887754
No 59
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=53.20 E-value=12 Score=28.40 Aligned_cols=35 Identities=11% Similarity=0.002 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+++++++|.+.. .- ++|+||+.++..++.+.+
T Consensus 48 ~l~~~la~~~g~~~~-~v-~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 48 KAREKVAKVLGVSPS-EI-FFTSCATESINWILKTVA 82 (384)
T ss_dssp HHHHHHHHHHTSCGG-GE-EEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-eE-EEECCHHHHHHHHHHhhh
Confidence 788899999997643 23 788999999999888776
No 60
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=52.52 E-value=5.8 Score=31.26 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+++++++|.+.. .- ++|+|+++++..++.+..
T Consensus 65 ~l~~~la~~~g~~~~-~v-~~~~g~t~a~~~~~~~~~ 99 (432)
T 3a9z_A 65 TARASLAKMIGGKPQ-DI-IFTSGGTESNNLVIHSTV 99 (432)
T ss_dssp HHHHHHHHHHTCCGG-GE-EEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC-eE-EEeCChHHHHHHHHHHHH
Confidence 789999999998533 23 789999999998887763
No 61
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=51.23 E-value=3.8 Score=31.42 Aligned_cols=43 Identities=5% Similarity=-0.089 Sum_probs=32.8
Q ss_pred HHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 62 FELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 62 ~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.++++ .+.+|+.+..|.+-...-.++|+||+.++..++.+..+
T Consensus 61 ~~lr~--------~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~ 103 (377)
T 3fdb_A 61 SLLSQ--------ATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTP 103 (377)
T ss_dssp CCHHH--------HHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred HHHHH--------HHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcC
Confidence 36777 88999999999765444557888999999887766543
No 62
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=50.78 E-value=17 Score=29.38 Aligned_cols=41 Identities=7% Similarity=-0.112 Sum_probs=29.9
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.| ...-.++|+|++.++..++.+..+
T Consensus 122 ~lr~--------~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~ 162 (448)
T 3aow_A 122 PLRE--------TLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLN 162 (448)
T ss_dssp HHHH--------HHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcC
Confidence 6777 7888887778986 333447888999998877665533
No 63
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=48.59 E-value=3.6 Score=33.52 Aligned_cols=37 Identities=0% Similarity=-0.067 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...++|++.++.+.. .-.+||+||++||..++-++|.
T Consensus 111 ~la~~l~~~~~~~~~-~~v~~~~sGseA~~~alk~a~~ 147 (453)
T 4ffc_A 111 QVAELLNALTPGDHD-KRTALFNSGAEAVENAIKVARL 147 (453)
T ss_dssp HHHHHHHHHSSCSSC-EEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC-cEEEEeCcHHHHHHHHHHHHHH
Confidence 677899999874321 1237899999999999988875
No 64
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=48.42 E-value=10 Score=30.65 Aligned_cols=78 Identities=6% Similarity=-0.010 Sum_probs=44.1
Q ss_pred CceeeCCCCCCHHHHHHHHHHHHhc---Cccch-HHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcc-cCCCCCcch
Q psy866 30 RFHAYFPSGNSYPSVLADMLSDAIG---CIGFS-WVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIA-VATPTSRRP 104 (132)
Q Consensus 30 rf~a~~ps~~s~~s~lgD~L~saln---~~~~s-w~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~-tsGgs~anl 104 (132)
|-+-|-|++...+--+-|-+...+. .++.+ ...--..++-.+.+..+++-+++++|-|+.+.- +| |+|||.++-
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v-~f~t~~~T~a~n 83 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEV-LFLQGGASLQFA 83 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEE-EEESSHHHHHHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceE-EEEcCcHHHHHH
Confidence 4456778876665555555555442 12111 000000001122344688999999999865544 67 899999987
Q ss_pred hhhh
Q psy866 105 TCLA 108 (132)
Q Consensus 105 ~aL~ 108 (132)
.++.
T Consensus 84 ~~~~ 87 (361)
T 3m5u_A 84 MIPM 87 (361)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 65
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=48.36 E-value=12 Score=28.95 Aligned_cols=42 Identities=7% Similarity=0.024 Sum_probs=32.6
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-...-.++|+|++.++..++.+..+
T Consensus 80 ~lr~--------~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~ 121 (398)
T 3ele_A 80 ETRA--------AIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTS 121 (398)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcC
Confidence 7778 89999999999764444447888999999888776644
No 66
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=47.90 E-value=3.1 Score=34.36 Aligned_cols=37 Identities=5% Similarity=-0.155 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
.+.+||++.++.+.. -..|+.||++||..++.++|..
T Consensus 101 ~la~~l~~~~~~~~~--~v~~~~sGseA~~~Aik~a~~~ 137 (476)
T 3i5t_A 101 RLAEKIATLTPGDLN--RIFFTTGGSTAVDSALRFSEFY 137 (476)
T ss_dssp HHHHHHHTTSSTTCC--EEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcC--EEEEeCchHHHHHHHHHHHHHH
Confidence 778899998864322 3478889999999999999863
No 67
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=47.87 E-value=7.6 Score=30.59 Aligned_cols=42 Identities=5% Similarity=0.020 Sum_probs=32.5
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCC-CCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYN-PKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~-G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+.+|.+-... -.++|+||+.++..++.+..+
T Consensus 81 ~l~~--------~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~ 123 (429)
T 1yiz_A 81 RLVQ--------ALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVD 123 (429)
T ss_dssp HHHH--------HHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcC
Confidence 7888 89999999999764333 447888999999888777644
No 68
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=47.68 E-value=12 Score=28.30 Aligned_cols=32 Identities=6% Similarity=0.075 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCC-CCcchhhh
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATP-TSRRPTCL 107 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGg-s~anl~aL 107 (132)
.+.+|+++++|.++...- ++|+|+ +.++..++
T Consensus 52 ~l~~~la~~~g~~~~~~v-~~~~g~gt~al~~~~ 84 (360)
T 1w23_A 52 QAQNLLRELLQIPNDYQI-LFLQGGASLQFTMLP 84 (360)
T ss_dssp HHHHHHHHHHTCCTTEEE-EEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceE-EEECCcchHHHHHHH
Confidence 788999999998632233 678887 88776654
No 69
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=47.10 E-value=13 Score=28.93 Aligned_cols=42 Identities=7% Similarity=-0.220 Sum_probs=32.4
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-...-.++|+|++.++..++.+..+
T Consensus 79 ~lr~--------~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~ 120 (417)
T 3g7q_A 79 ALLN--------ALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAG 120 (417)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSB
T ss_pred HHHH--------HHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcC
Confidence 7777 88899998888764444557888999999887766554
No 70
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=47.05 E-value=4.6 Score=31.48 Aligned_cols=42 Identities=12% Similarity=-0.068 Sum_probs=32.7
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+....-.++|+||+.++..++.+.++
T Consensus 79 ~l~~--------~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~ 120 (407)
T 2zc0_A 79 ELRE--------ELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLID 120 (407)
T ss_dssp HHHH--------HHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcC
Confidence 7888 89999988889653333347888999999998887754
No 71
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=46.62 E-value=8 Score=30.31 Aligned_cols=41 Identities=12% Similarity=-0.129 Sum_probs=33.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
++|+ .+.+|+.+..|++-.....++|+||+.++..++.+..
T Consensus 82 ~l~~--------~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~ 122 (406)
T 1xi9_A 82 ELRK--------AIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL 122 (406)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred HHHH--------HHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC
Confidence 8888 9999999999887544445788899999988877653
No 72
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=46.49 E-value=4 Score=32.44 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+|+++.++.+.. -.+|++||++++..++.++|.
T Consensus 76 ~l~~~la~~~~~~~~--~v~~~~gg~ea~~~al~~~~~ 111 (430)
T 3i4j_A 76 EYAGRLARFVGLPTF--RFWAVSGGSEATESAVKLARQ 111 (430)
T ss_dssp HHHHHHHHHTTCTTC--EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC--EEEEeCcHHHHHHHHHHHHHH
Confidence 677899999876533 237899999999999988874
No 73
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=45.14 E-value=8.4 Score=29.51 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=32.9
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
++++ .+.+|+.+.+|.+-...-.++|+|++.++..++.+..+.
T Consensus 63 ~lr~--------~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~ 105 (376)
T 3ezs_A 63 SLRA--------AQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFD 105 (376)
T ss_dssp HHHH--------HHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTT
T ss_pred HHHH--------HHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCC
Confidence 7888 899999999998533333478899999998877766544
No 74
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=45.09 E-value=9.6 Score=29.51 Aligned_cols=61 Identities=7% Similarity=-0.029 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCccchH---HHH-HHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 44 VLADMLSDAIGCIGFSW---VFE-LQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 44 ~lgD~L~saln~~~~sw---~~e-lE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.|.+...++.....| ..+ +++ .+.+|+.+..|++-.....++|+|++.++..++.+..+
T Consensus 45 ~v~~a~~~~~~~~~~~y~~~~~~~lr~--------~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~ 109 (390)
T 1d2f_A 45 CIIEALNQRLMHGVFGYSRWKNDEFLA--------AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 109 (390)
T ss_dssp HHHHHHHHHHTTCCCCCCCSCCHHHHH--------HHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhCCCCCCCCCChHHHHH--------HHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcC
Confidence 45556666554321122 226 888 89999999888654433447888999888877766644
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=45.01 E-value=11 Score=29.04 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=29.5
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
++++ .+.+|+.+..|++-.....++|+|++.++..++.+..
T Consensus 73 ~l~~--------~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~ 113 (369)
T 3cq5_A 73 ELRD--------ELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFG 113 (369)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred HHHH--------HHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhc
Confidence 7888 9999999998876333344677788888766665543
No 76
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=44.65 E-value=8 Score=29.87 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=32.4
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCC-CCCC-CCcccCCCCCcchhhhhccccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDP-KIYN-PKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP-~~~~-G~i~tsGgs~anl~aL~~AR~~ 113 (132)
++++ .+.+|+.+..|.+ -... -.++|+|++.++..++.+.++.
T Consensus 70 ~lr~--------~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~ 114 (396)
T 3jtx_A 70 ELRQ--------ACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNP 114 (396)
T ss_dssp HHHH--------HHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC
T ss_pred HHHH--------HHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCC
Confidence 7888 8999999999975 2222 3378889999998887666544
No 77
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=43.82 E-value=25 Score=27.85 Aligned_cols=33 Identities=9% Similarity=-0.022 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+++++++|.++ . +++++|+.+|..++.+..
T Consensus 113 ~l~~~la~~~g~~~---~-i~~~sGs~a~~~al~~l~ 145 (427)
T 2w8t_A 113 EVEQALRDFYGTTG---A-IVFSTGYMANLGIISTLA 145 (427)
T ss_dssp HHHHHHHHHHTCSE---E-EEESCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCc---e-EEecCcHHHHHHHHHHhc
Confidence 56678888888762 3 677888889998776543
No 78
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=43.82 E-value=5 Score=32.22 Aligned_cols=58 Identities=9% Similarity=-0.006 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcCc-cchHHHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 44 VLADMLSDAIGCI-GFSWVFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 44 ~lgD~L~saln~~-~~sw~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
-+.|.+...+... ...+..+++. .+.+|+++.++ . ..-.+|++||++++..++.+||.
T Consensus 77 ~v~~a~~~~~~~~~~~~~~~~~~~--------~la~~l~~~~~-~--~~~v~~~~gg~eA~~~al~~ar~ 135 (453)
T 2cy8_A 77 RVNAAIAEALSHGVQYAASHPLEV--------RWAERIVAAFP-S--IRKLRFTGSGTETTLLALRVARA 135 (453)
T ss_dssp HHHHHHHHHHTTTCSSCSSCHHHH--------HHHHHHHHHCT-T--CSEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHH--------HHHHHHHhhCC-C--CCEEEEeCCHHHHHHHHHHHHHH
Confidence 3445555555432 1223337888 89999999975 2 22347899999999999988764
No 79
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=43.33 E-value=3.4 Score=33.61 Aligned_cols=37 Identities=3% Similarity=-0.095 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...++|++.++.+. ..-.+||+||++||..++.++|.
T Consensus 108 ~la~~l~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~ 144 (451)
T 3oks_A 108 AVCEQLNRLTPVRG-DKRSALFNSGSEAVENAVKIARS 144 (451)
T ss_dssp HHHHHHHHHSSCCS-SEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCC-CCEEEEeCcHHHHHHHHHHHHHH
Confidence 67789999886321 12247899999999999988885
No 80
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=43.17 E-value=3.3 Score=32.98 Aligned_cols=37 Identities=0% Similarity=-0.131 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.+|+++.++.... .-.+|++||+++|..++.++|.
T Consensus 90 ~l~~~la~~~~~~~~-~~v~~~~ggsea~~~al~~~~~ 126 (439)
T 3dxv_A 90 TLAERLLASFPGEGT-HKIWFGHSGSDANEAAYRAIVK 126 (439)
T ss_dssp HHHHHHHHTTTCTTT-EEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC-CEEEEeCCHHHHHHHHHHHHHH
Confidence 778899999843221 1237899999999999988764
No 81
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=42.84 E-value=6.1 Score=31.10 Aligned_cols=42 Identities=17% Similarity=0.046 Sum_probs=33.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++|+ .+.+|+.+..|++-...-.++|+||+.++..++.+..+
T Consensus 83 ~l~~--------~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~ 124 (409)
T 2gb3_A 83 ELRE--------AFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIAN 124 (409)
T ss_dssp HHHH--------HHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCC
Confidence 7888 99999999888764434447888999999998877643
No 82
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=42.47 E-value=9.5 Score=29.29 Aligned_cols=42 Identities=17% Similarity=0.076 Sum_probs=32.8
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-...-.++|+||+.++..++.+..+
T Consensus 70 ~l~~--------~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~ 111 (370)
T 2z61_A 70 ELRE--------KISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIID 111 (370)
T ss_dssp HHHH--------HHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcC
Confidence 7888 99999999888764434447888999999988876644
No 83
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=41.34 E-value=8.7 Score=29.98 Aligned_cols=60 Identities=5% Similarity=-0.056 Sum_probs=39.3
Q ss_pred HHHHHHHHHhcCccchH-----HHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 44 VLADMLSDAIGCIGFSW-----VFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 44 ~lgD~L~saln~~~~sw-----~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+.+...+......| ..++|+ .+.+|+.+..|.+-...-.++|+||+.++..++.+..
T Consensus 58 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~--------~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~ 122 (389)
T 1o4s_A 58 PVVEEAVRFLQKGEVKYTDPRGIYELRE--------GIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL 122 (389)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTCCHHHHH--------HHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHH--------HHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC
Confidence 35555555553321122 238888 8999999988975222234788899999988877653
No 84
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=39.79 E-value=12 Score=29.57 Aligned_cols=35 Identities=11% Similarity=-0.095 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+|+++.++-++ -.+|++||++++..++-+||.
T Consensus 96 ~la~~l~~~~~~~~---~v~~~~ggsea~~~al~~a~~ 130 (427)
T 3fq8_A 96 VLAEMVNDAVPSIE---MVRFVNSGTEACMAVLRIMRA 130 (427)
T ss_dssp HHHHHHHHHSTTCS---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC---EEEEeCCHHHHHHHHHHHHHH
Confidence 77889999987332 237899999999999977774
No 85
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=38.49 E-value=11 Score=29.84 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.++-++ -.+|++||+++|..++.++|.
T Consensus 97 ~la~~l~~~~~~~~---~v~~~~sGsea~~~al~~a~~ 131 (429)
T 4e77_A 97 KMAQLVTDLVPTMD---MVRMVNSGTEATMSAIRLARG 131 (429)
T ss_dssp HHHHHHHHHSTTCS---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCC---EEEEeCcHHHHHHHHHHHHHH
Confidence 66678888886222 237899999999999998874
No 86
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=37.12 E-value=6.8 Score=31.54 Aligned_cols=37 Identities=3% Similarity=-0.076 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
...+|+++.++... .-.+|++||++||..++.++|..
T Consensus 91 ~la~~l~~~~~~~~--~~v~~~~sGseA~~~al~~~~~~ 127 (448)
T 3dod_A 91 QLAETLIDISPKKL--TRVFYSDSGAEAMEIALKMAFQY 127 (448)
T ss_dssp HHHHHHHHHSCTTE--EEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC--CEEEEeCchHHHHHHHHHHHHHH
Confidence 67789999875332 23478999999999999999874
No 87
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=36.98 E-value=7.5 Score=29.57 Aligned_cols=34 Identities=6% Similarity=-0.092 Sum_probs=27.4
Q ss_pred HHHHH-HHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSF-FVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~W-l~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.++ +++++|.+ .- ++|+|++.++..++.+..+
T Consensus 57 ~l~~~~la~~~~~~---~v-~~~~g~t~a~~~~~~~~~~ 91 (371)
T 2e7j_A 57 DFIHNQLPKFLGCD---VA-RVTNGAREAKFAVMHSLAK 91 (371)
T ss_dssp HHHHTHHHHHTTSS---EE-EEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCC---EE-EEeCChHHHHHHHHHHHhC
Confidence 67889 99999986 33 7888999999988877644
No 88
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=36.95 E-value=5.3 Score=32.75 Aligned_cols=36 Identities=3% Similarity=-0.086 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...++|++.++.+.. -.+|++||+++|..++.++|.
T Consensus 122 ~L~e~la~~~~~~~~--~v~~~~sGseA~~~Alk~a~~ 157 (457)
T 3tfu_A 122 RLAKLLVDITPAGLD--TVFFSDSGSVSVEVAAKMALQ 157 (457)
T ss_dssp HHHHHHHHHSSTTEE--EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcC--EEEEeCcHHHHHHHHHHHHHH
Confidence 667788888864332 237889999999999999985
No 89
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=35.86 E-value=11 Score=29.12 Aligned_cols=34 Identities=3% Similarity=-0.058 Sum_probs=27.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.+|.. . .++|+||++++..++.+++.
T Consensus 85 ~l~~~la~~~~~~---~-v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 85 RLAKKLIDATFAD---R-VFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp HHHHHHHHHSSCS---E-EEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCC---e-EEEeCcHHHHHHHHHHHHHH
Confidence 6777899998754 2 37899999999999988764
No 90
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=35.68 E-value=9.8 Score=29.39 Aligned_cols=39 Identities=8% Similarity=0.037 Sum_probs=29.6
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++|+ .+++|+++.+|.+.. - +++++|+.++..++.+..+
T Consensus 69 ~l~~--------~~r~~la~~~g~~~~--~-i~~~sGt~a~~~a~~~~~~ 107 (405)
T 2vi8_A 69 IVEE--------LARERAKQLFGAEHA--N-VQPHSGAQANMAVYFTVLE 107 (405)
T ss_dssp HHHH--------HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCce--E-EEecCcHHHHHHHHHHhcC
Confidence 7888 889999999998732 1 4444459999998887754
No 91
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=35.64 E-value=17 Score=28.66 Aligned_cols=76 Identities=9% Similarity=-0.119 Sum_probs=44.5
Q ss_pred CCCceeeCCCCCC----HHHHHHHHHHHHhcCcc---chH-----HHHHHhhhcccchHHHHHHHHHHhCCC-CCCCCCc
Q psy866 28 HPRFHAYFPSGNS----YPSVLADMLSDAIGCIG---FSW-----VFELQERKRKDDLAYKRSFFVRMVSDP-KIYNPKI 94 (132)
Q Consensus 28 hPrf~a~~ps~~s----~~s~lgD~L~saln~~~---~sw-----~~elE~~~~~~~~~~vi~Wl~~~lGlP-~~~~G~i 94 (132)
.|.+.-|-.+.+. ++..+.|.+...++... ..| ..++++ .+.+|+.+.+|.+ -...-.+
T Consensus 42 ~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~--------~la~~l~~~~g~~~~~~~~v~ 113 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ--------QILKLLERMYGITGLDEDNLI 113 (425)
T ss_dssp STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHH--------HHHHHHHHHHCCCSCCGGGEE
T ss_pred CCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHH--------HHHHHHHhccCCCCCCcccEE
Confidence 4555544333222 34456666666654311 111 227888 8889998887965 2223347
Q ss_pred ccCCCCCcchhhhhccc
Q psy866 95 AVATPTSRRPTCLASSA 111 (132)
Q Consensus 95 ~tsGgs~anl~aL~~AR 111 (132)
+|+|++.++..++.+..
T Consensus 114 ~t~G~~~al~~~~~~l~ 130 (425)
T 1vp4_A 114 FTVGSQQALDLIGKLFL 130 (425)
T ss_dssp EEEHHHHHHHHHHHHHC
T ss_pred EeccHHHHHHHHHHHhC
Confidence 88899999877766554
No 92
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=34.93 E-value=8.2 Score=29.42 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
...+++++++|.+. . +++++|++++..++.+....
T Consensus 51 ~l~~~la~~~~~~~---~-i~~~~G~~a~~~al~~~~~~ 85 (357)
T 3lws_A 51 PFEQKFADVLGMDD---A-VFFPSGTMAQQVALRIWSDE 85 (357)
T ss_dssp HHHHHHHHHHTCSE---E-EEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCc---E-EEecCcHHHHHHHHHHHhhc
Confidence 34558888888753 2 67889999999888776543
No 93
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=34.29 E-value=13 Score=30.21 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=28.4
Q ss_pred ccchHHHHHHHHHHhCCCCCCCCCcc-cCCCCCcchhhhh
Q psy866 70 KDDLAYKRSFFVRMVSDPKIYNPKIA-VATPTSRRPTCLA 108 (132)
Q Consensus 70 ~~~~~~vi~Wl~~~lGlP~~~~G~i~-tsGgs~anl~aL~ 108 (132)
.+.++.+++-+++++|-|+.+.- +| |+|||.++-+++.
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~ev-if~t~~~T~a~n~ai~ 109 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKV-LFCHGGGRGQFAGVPL 109 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEE-EEEESCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCceE-EEEcCCchHHHHHHHH
Confidence 45667899999999999865444 78 5899999877654
No 94
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=34.05 E-value=9.4 Score=30.20 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 76 KRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 76 vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
..+.+++.++.+.. -.+||+||++++..++.++|
T Consensus 91 l~~~la~~~~~~~~--~v~~~~ggtea~~~ai~~~~ 124 (429)
T 1s0a_A 91 LCRKLVAMTPQPLE--CVFLADSGSVAVEVAMKMAL 124 (429)
T ss_dssp HHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHH
Confidence 34467777775332 23789999999999987765
No 95
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=33.78 E-value=7.3 Score=29.68 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
...+++++++|.+.. ++++||++++..++.+.+..
T Consensus 52 ~l~~~la~~~~~~~~----i~~~~g~~a~~~a~~~~~~~ 86 (359)
T 3pj0_A 52 DFETKIAKILGKQSA----VFFPSGTMAQQIALRIWADR 86 (359)
T ss_dssp HHHHHHHHHHTCSEE----EEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcE----EEeCCHHHHHHHHHHHHHhc
Confidence 566788999998642 67899999999888776543
No 96
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=33.75 E-value=30 Score=26.56 Aligned_cols=35 Identities=3% Similarity=-0.105 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+++++++++|.+.. - +++++|+.++..++.++.+
T Consensus 73 ~ar~~la~~~g~~~~--~-i~~~sGt~a~~~~~~~~~~ 107 (407)
T 2dkj_A 73 LAIERAKALFGAAWA--N-VQPHSGSQANMAVYMALME 107 (407)
T ss_dssp HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCcc--e-EEecchHHHHHHHHHHhcC
Confidence 778899999998632 1 4555567788888877643
No 97
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=33.59 E-value=21 Score=27.38 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=31.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCC-CCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYN-PKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~-G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-... -.++|+|++.++..++.+..+
T Consensus 67 ~l~~--------~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~ 109 (376)
T 2dou_A 67 PFLE--------EAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE 109 (376)
T ss_dssp HHHH--------HHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcC
Confidence 7888 88899999889863222 337888999998877766543
No 98
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=33.50 E-value=10 Score=30.18 Aligned_cols=35 Identities=11% Similarity=-0.055 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.++-+ .-.+|++||+++|..++.+||.
T Consensus 100 ~l~~~la~~~~~~---~~v~~~~sgseA~~~al~~ar~ 134 (434)
T 2epj_A 100 LLAEKILGYVKRG---GMIRFVNSGTEATMTAIRLARG 134 (434)
T ss_dssp HHHHHHHHHHCTT---CEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC---CEEEEeCCHHHHHHHHHHHHHH
Confidence 6677888887412 2237899999999999988764
No 99
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=33.49 E-value=13 Score=29.37 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=26.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+.+++.++-++ -.+|++||++++..++.++|.
T Consensus 99 ~l~~~la~~~~~~~---~v~~~~sGsea~~~ai~~a~~ 133 (434)
T 3l44_A 99 KFAKMLKEAMPALD---KVRFVNSGTEAVMTTIRVARA 133 (434)
T ss_dssp HHHHHHHHHCTTCS---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC---EEEEeCchHHHHHHHHHHHHH
Confidence 45567777776222 237899999999999998876
No 100
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=33.09 E-value=10 Score=30.69 Aligned_cols=36 Identities=6% Similarity=-0.085 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+|+++.++.+.. -.+|++||+++|..++.++|+
T Consensus 98 ~la~~l~~~~~~~~~--~v~~~~ggseA~~~al~~~~~ 133 (459)
T 4a6r_A 98 ELSSLLAEVTPAGFD--RVFYTNSGSESVDTMIRMVRR 133 (459)
T ss_dssp HHHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC--EEEEeCchHHHHHHHHHHHHH
Confidence 677899999765332 347889999999999999986
No 101
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=32.60 E-value=16 Score=28.65 Aligned_cols=41 Identities=10% Similarity=-0.026 Sum_probs=32.4
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
++++ .+.+|+.+..|.+-...-.++|+||+.++..++.+..
T Consensus 86 ~lr~--------~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~ 126 (437)
T 3g0t_A 86 ELKQ--------EASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVAN 126 (437)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHT
T ss_pred HHHH--------HHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHh
Confidence 7888 8999999998876444445788899999988877664
No 102
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=32.43 E-value=6.6 Score=31.39 Aligned_cols=34 Identities=6% Similarity=-0.015 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.+|. + -.+|++||++++..++.++|.
T Consensus 103 ~l~~~la~~~g~-~---~v~~~~ggteA~~~al~~~~~ 136 (420)
T 2pb2_A 103 RLGRKLIDATFA-E---RVLFMNSGTEANETAFKLARH 136 (420)
T ss_dssp HHHHHHHHHSSC-S---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-C---eEEEeCCHHHHHHHHHHHHHH
Confidence 666778888873 2 237899999999999998875
No 103
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=31.82 E-value=13 Score=30.56 Aligned_cols=40 Identities=5% Similarity=-0.150 Sum_probs=27.9
Q ss_pred HHHHhhhcccchHHHHHHHHHHhCCCCCC--CCCcccCCCCCcchhhhhcc
Q psy866 62 FELQERKRKDDLAYKRSFFVRMVSDPKIY--NPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 62 ~elE~~~~~~~~~~vi~Wl~~~lGlP~~~--~G~i~tsGgs~anl~aL~~A 110 (132)
.++|+ .+++|+++++|.+..- ...++++|+ .+|..++.+.
T Consensus 89 ~~le~--------~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~al 130 (483)
T 1rv3_A 89 DELET--------LCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTAL 130 (483)
T ss_dssp HHHHH--------HHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHH
T ss_pred HHHHH--------HHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHh
Confidence 38899 9999999999986321 122555665 8888855443
No 104
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=31.68 E-value=8.8 Score=30.59 Aligned_cols=33 Identities=3% Similarity=-0.106 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 76 KRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 76 vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
..+++++.+|.. . .+||+||++||..++.++++
T Consensus 81 l~~~la~~~~~~---~-v~~t~ggt~A~~~al~~~~~ 113 (467)
T 1ax4_A 81 LKDKAKELFNYD---Y-IIPAHQGRGAENILFPVLLK 113 (467)
T ss_dssp HHHHHHHHHCCC---E-EEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC---c-EEEcCCcHHHHHHHHHHHHH
Confidence 344666777752 2 37899999999999988875
No 105
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=31.24 E-value=13 Score=30.03 Aligned_cols=37 Identities=5% Similarity=-0.021 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAEED 114 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~~~ 114 (132)
.+++++++++|.+.. - +++++|+.+|..++.+.++.-
T Consensus 95 ~a~~~la~~~g~~~~--~-v~~~sGs~a~~~a~~~~~~~G 131 (447)
T 3h7f_A 95 LARDRAKALFGAEFA--N-VQPHSGAQANAAVLHALMSPG 131 (447)
T ss_dssp HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHcCCCce--E-EEeCCHHHHHHHHHHHhcCCC
Confidence 666999999998742 2 337788999999888776543
No 106
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=30.69 E-value=23 Score=27.83 Aligned_cols=42 Identities=5% Similarity=-0.049 Sum_probs=31.4
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCC-CCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIY-NPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~-~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-.. .-.++|+|++.++..++.+..+
T Consensus 89 ~lr~--------~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~ 131 (404)
T 2o1b_A 89 AFKQ--------AIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN 131 (404)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC
Confidence 7888 8899999999986221 2337888999998887766543
No 107
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=30.34 E-value=7.8 Score=29.70 Aligned_cols=34 Identities=6% Similarity=-0.071 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+++++.+|.|+ . .++|+||++++..++.++|
T Consensus 74 ~l~~~la~~~g~~~--~-v~~~~g~t~a~~~~~~~~~ 107 (375)
T 2eh6_A 74 ELAHKLVKHFWTEG--K-VFFANSGTESVEAAIKLAR 107 (375)
T ss_dssp HHHHHHHHTSSSCE--E-EEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCC--e-EEEeCchHHHHHHHHHHHH
Confidence 45567888888852 2 3789999999999886543
No 108
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=30.24 E-value=22 Score=27.53 Aligned_cols=35 Identities=6% Similarity=0.021 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.+++++.+|.+.. - +++++|+.++..++.+..+
T Consensus 82 ~a~~~~~~~~~~~~~--~-v~~~~Gs~a~~~al~~~~~ 116 (425)
T 3ecd_A 82 LAIERVKRLFNAGHA--N-VQPHSGAQANGAVMLALAK 116 (425)
T ss_dssp HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCc--e-eecCchHHHHHHHHHHccC
Confidence 666889999998753 2 4588899999888776543
No 109
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=30.18 E-value=9.8 Score=29.61 Aligned_cols=34 Identities=6% Similarity=-0.044 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+.+++.+| ++ -.++++||++++..++.+++.
T Consensus 86 ~l~~~la~~~g-~~---~v~~~~gg~~a~~~al~~~~~ 119 (397)
T 2ord_A 86 ELAELLSKNTF-GG---KVFFANTGTEANEAAIKIARK 119 (397)
T ss_dssp HHHHHHHHTTT-SC---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CC---eEEEeCCHHHHHHHHHHHHHH
Confidence 56667788877 32 237899999999999888763
No 110
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=30.11 E-value=23 Score=27.35 Aligned_cols=39 Identities=5% Similarity=-0.000 Sum_probs=28.6
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++|+ .+.+++++.+|.+.. - ++++.|+.++..++.+..+
T Consensus 71 ~~~~--------~~~~~la~~~g~~~~--~-i~~~sGt~a~~~~~~~~~~ 109 (417)
T 3n0l_A 71 EIET--------LAIERCKKLFNCKFA--N-VQPNSGSQANQGVYAALIN 109 (417)
T ss_dssp HHHH--------HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHSC
T ss_pred HHHH--------HHHHHHHHHhCCCCc--c-eEeccHHHHHHHHHHHhcC
Confidence 7888 889999999998543 2 3444448999888776644
No 111
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=28.62 E-value=27 Score=26.51 Aligned_cols=35 Identities=9% Similarity=-0.111 Sum_probs=27.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+.+++++|.+.. . .++|+||+.++..++.+.|
T Consensus 63 ~l~~~la~~~g~~~~-~-v~~~~g~t~a~~~~~~~~~ 97 (390)
T 1elu_A 63 QLRQALAETFNVDPN-T-ITITDNVTTGCDIVLWGLD 97 (390)
T ss_dssp HHHHHHHHHTTSCGG-G-EEEESSHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCHH-H-EEEeCChHHHHHHHHhCCC
Confidence 677788888887543 2 3788999999999888874
No 112
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=28.48 E-value=25 Score=27.14 Aligned_cols=35 Identities=0% Similarity=-0.112 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.+++++.+|.+.. - +++++|+.++..++.+..+
T Consensus 80 ~~~~~la~~~~~~~~--~-v~~~sGs~a~~~a~~~~~~ 114 (420)
T 3gbx_A 80 LAIDRAKELFGADYA--N-VQPHSGSQANFAVYTALLQ 114 (420)
T ss_dssp HHHHHHHHHHTCSEE--E-CCCSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCc--e-eEecCcHHHHHHHHHHhcC
Confidence 778999999998543 2 3345558899988766544
No 113
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=27.93 E-value=1e+02 Score=24.07 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=30.3
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCC--CCCCCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDP--KIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP--~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+.+|.+ -.....++|+|+++++..++.+.++
T Consensus 87 ~lr~--------~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~ 130 (428)
T 1iay_A 87 EFRK--------AIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLAD 130 (428)
T ss_dssp HHHH--------HHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCC
Confidence 7777 8889999888854 2223347888999998877766554
No 114
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=27.82 E-value=18 Score=27.93 Aligned_cols=42 Identities=2% Similarity=-0.036 Sum_probs=32.3
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCC-CCCcccCCCCCcchhhhhcccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIY-NPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~-~G~i~tsGgs~anl~aL~~AR~ 112 (132)
++++ .+.+|+.+..|.+-.. .-.++|+||+.++..++.+..+
T Consensus 65 ~l~~--------~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~ 107 (410)
T 3e2y_A 65 ALVK--------ALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVD 107 (410)
T ss_dssp HHHH--------HHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC
Confidence 7888 8999999999976443 3447888999999887766543
No 115
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=27.81 E-value=30 Score=26.21 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+.+++++|.+ .. ++|+||++++..++.+.|
T Consensus 36 ~l~~~la~~~~~~---~v-~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 36 LFEEALCEFLGVK---HA-LVFNSATSALLTLYRNFS 68 (375)
T ss_dssp HHHHHHHHHHTCS---EE-EEESCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCC---eE-EEeCCHHHHHHHHHHHhc
Confidence 3445677777876 23 789999999999888875
No 116
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=27.74 E-value=54 Score=25.08 Aligned_cols=36 Identities=8% Similarity=-0.050 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+.+++++|.++...- ++|+||+.++..++.+.|
T Consensus 76 ~l~~~la~~~~~~~~~~v-~~~~g~t~a~~~~~~~~~ 111 (420)
T 1t3i_A 76 AVRNKVAKFINARSPREI-VYTRNATEAINLVAYSWG 111 (420)
T ss_dssp HHHHHHHHHTTCSCGGGE-EEESSHHHHHHHHHHHTH
T ss_pred HHHHHHHHHcCCCCCCeE-EEcCChHHHHHHHHHHhh
Confidence 677899999998322233 789999999999888873
No 117
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=27.51 E-value=29 Score=27.12 Aligned_cols=41 Identities=5% Similarity=-0.040 Sum_probs=31.0
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCC-CCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIY-NPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~-~G~i~tsGgs~anl~aL~~AR 111 (132)
++++ .+.+|+.+..|.+-.. .-.++|+||+.++..++.+..
T Consensus 79 ~l~~--------~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~ 120 (412)
T 2x5d_A 79 RLRR--------AISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL 120 (412)
T ss_dssp HHHH--------HHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHC
T ss_pred HHHH--------HHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhC
Confidence 7888 8889999888975332 233788899999988876653
No 118
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=27.45 E-value=13 Score=28.54 Aligned_cols=36 Identities=11% Similarity=-0.088 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+++++++|.++...- ++|+||+.++..++.+.|
T Consensus 71 ~l~~~la~~~~~~~~~~v-~~~~g~t~a~~~~~~~~~ 106 (406)
T 1kmj_A 71 NVRKRASLFINARSAEEL-VFVRGTTEGINLVANSWG 106 (406)
T ss_dssp HHHHHHHHHTTCSCGGGE-EEESSHHHHHHHHHHHTH
T ss_pred HHHHHHHHHcCCCCCCeE-EEeCChhHHHHHHHHHhh
Confidence 678899999998322223 788999999999988874
No 119
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=26.81 E-value=23 Score=29.13 Aligned_cols=41 Identities=7% Similarity=-0.117 Sum_probs=31.6
Q ss_pred HHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
++++ .+.+|+.+..|++-.....++|+|++.++..++.+..
T Consensus 138 ~lr~--------~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 138 GLRD--------AIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp HHHH--------HHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC
T ss_pred HHHH--------HHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc
Confidence 7888 9999999999987555555778899988877766553
No 120
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=26.80 E-value=12 Score=30.34 Aligned_cols=36 Identities=3% Similarity=-0.164 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.++.+. .-.+|++||+++|..++.++|.
T Consensus 99 ~la~~l~~~~~~~~--~~v~~~~gGseA~~~al~~~~~ 134 (460)
T 3gju_A 99 TLAKMIIDRAPKGM--SRVYFGLSGSDANETNIKLIWY 134 (460)
T ss_dssp HHHHHHHHHSCTTE--EEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCc--CEEEEeCchHHHHHHHHHHHHH
Confidence 67778888864332 2347889999999999999885
No 121
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=26.71 E-value=22 Score=27.48 Aligned_cols=34 Identities=12% Similarity=-0.057 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.+|+++.+|.+ . .++|+||+.++..++.+..+
T Consensus 92 ~l~~~la~~~g~~---~-v~~~~ggt~a~~~~~~~~~~ 125 (398)
T 3a2b_A 92 ELEEKLSAYVGKE---A-AILFSTGFQSNLGPLSCLMG 125 (398)
T ss_dssp HHHHHHHHHHTCS---E-EEEESSHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhCCC---c-EEEECCHHHHHHHHHHHHhC
Confidence 7888999999963 2 37899999999998887754
No 122
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=26.49 E-value=21 Score=28.32 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+.+++.++-++ -.+|++||+++|..++.++|.
T Consensus 97 ~l~~~la~~~~~~~---~v~~~~~Gsea~~~ai~~a~~ 131 (429)
T 3k28_A 97 KLAKLVIERVPSIE---IVRMVNSGTEATMSALRLARG 131 (429)
T ss_dssp HHHHHHHHHSTTCS---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC---EEEEeCChHHHHHHHHHHHHH
Confidence 44556777765222 237899999999999988875
No 123
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=26.06 E-value=14 Score=29.81 Aligned_cols=36 Identities=14% Similarity=0.049 Sum_probs=25.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+.+++.++- ....-.+|++||++||..++.++|
T Consensus 105 ~la~~la~~~~~-~~~~~v~~~~~gseA~~~aik~a~ 140 (449)
T 2cjg_A 105 RFVETFARVLGD-PALPHLFFVEGGALAVENALKAAF 140 (449)
T ss_dssp HHHHHHHHHHCC-TTCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCCEEEEeCchHHHHHHHHHHHH
Confidence 455567777761 112234789999999999998877
No 124
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=25.88 E-value=15 Score=28.84 Aligned_cols=32 Identities=9% Similarity=0.021 Sum_probs=23.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~A 110 (132)
...+++++.+|.++ . +++++|+.++..++.+.
T Consensus 46 ~l~~~la~~~g~~~---~-i~~~~gt~al~~~~~~~ 77 (418)
T 2c81_A 46 KFAKAFADFNGVPY---C-VPTTSGSTALMLALEAL 77 (418)
T ss_dssp HHHHHHHHHHTCSE---E-EEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCc---E-EEeCCHHHHHHHHHHHc
Confidence 56667788888762 3 78888888888887776
No 125
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=25.74 E-value=11 Score=30.21 Aligned_cols=62 Identities=6% Similarity=-0.029 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCcc-chH-----HHHHHhhhcccchHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 43 SVLADMLSDAIGCIG-FSW-----VFELQERKRKDDLAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 43 s~lgD~L~saln~~~-~sw-----~~elE~~~~~~~~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
..+.|.+..+++... ..| ..++++ .+.+|+.+.+|.+-...-.++|+||+.++..++.+..+
T Consensus 73 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~--------~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~ 140 (447)
T 3b46_A 73 QFAIKEAQKALDIPMVNQYSPTRGRPSLIN--------SLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN 140 (447)
T ss_dssp HHHHHHHHHHTTSGGGGSCCCTTCCHHHHH--------HHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCcCCCCCCCCCCCHHHHH--------HHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC
Confidence 445666666665311 111 127888 88999998888653333347888999999888776644
No 126
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=25.08 E-value=47 Score=23.06 Aligned_cols=34 Identities=9% Similarity=-0.073 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhh
Q psy866 73 LAYKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLA 108 (132)
Q Consensus 73 ~~~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~ 108 (132)
-+.+++||++.||.|+..- .+++|.++.+-+-.+
T Consensus 52 N~ali~~LAk~l~V~ks~V--~Iv~G~tSR~K~v~I 85 (108)
T 1n91_A 52 NSHLVKFLGKQFRVAKSQV--VIEKGELGRHKQIKI 85 (108)
T ss_dssp HHHHHHHHHHHTCCCTTTE--EESSCTTSSEEEEEE
T ss_pred HHHHHHHHHHHhCCccceE--EEEecCCCCccEEEE
Confidence 3489999999999998742 578888877765333
No 127
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=24.61 E-value=16 Score=28.82 Aligned_cols=35 Identities=11% Similarity=-0.114 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.++ . ..-.+|++||++++..++.+||.
T Consensus 96 ~l~~~l~~~~~-~--~~~v~~~~~g~ea~~~al~~ar~ 130 (424)
T 2e7u_A 96 ALAKKVKRAYP-F--VDLVRFVNSGTEATMSALRLARG 130 (424)
T ss_dssp HHHHHHHHHCT-T--CCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-C--CCEEEEeCCHHHHHHHHHHHHHH
Confidence 66677888774 1 12237889999999999987664
No 128
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=23.99 E-value=45 Score=24.54 Aligned_cols=18 Identities=17% Similarity=0.335 Sum_probs=14.4
Q ss_pred chHHHHHHHHHHhCCCCC
Q psy866 72 DLAYKRSFFVRMVSDPKI 89 (132)
Q Consensus 72 ~~~~vi~Wl~~~lGlP~~ 89 (132)
|...|.+||++.+|||+-
T Consensus 82 TvedV~~WL~~~v~LpqY 99 (150)
T 2l5y_A 82 TLEDTLQWLIEFVELPQY 99 (150)
T ss_dssp CHHHHHHHHHHHTCCTTS
T ss_pred CHHHHHHHHHHcCCcHHH
Confidence 334799999999999963
No 129
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=23.81 E-value=17 Score=28.71 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=31.1
Q ss_pred HHHhhhcccchHHHHHHHHHHhCC--CCCCCCCcccCCCCCcchhhhhccccc
Q psy866 63 ELQERKRKDDLAYKRSFFVRMVSD--PKIYNPKIAVATPTSRRPTCLASSAEE 113 (132)
Q Consensus 63 elE~~~~~~~~~~vi~Wl~~~lGl--P~~~~G~i~tsGgs~anl~aL~~AR~~ 113 (132)
++|+ .+.+|+.+..|+ +-...-.++|+||+++|..++.+.++.
T Consensus 90 ~l~~--------~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~ 134 (435)
T 3piu_A 90 AFKK--------AMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADP 134 (435)
T ss_dssp HHHH--------HHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCT
T ss_pred HHHH--------HHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCC
Confidence 7888 888898877663 212223478889999999988777654
No 130
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=22.97 E-value=17 Score=29.32 Aligned_cols=34 Identities=6% Similarity=0.081 Sum_probs=25.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+.+++.+|. + -.+|++||+++|..++.++|.
T Consensus 122 ~l~~~la~~~g~-~---~v~~~~sGseA~~~al~~~~~ 155 (439)
T 2oat_A 122 EYEEYITKLFNY-H---KVLPMNTGVEAGETACKLARK 155 (439)
T ss_dssp HHHHHHHHHHTC-S---EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-C---EEEEeCCHHHHHHHHHHHHHH
Confidence 455567777773 2 237899999999999998873
No 131
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=22.84 E-value=15 Score=29.26 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
.+.+|+.+. |.+-...-.++|+||+.++..++.+.++
T Consensus 104 ~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~ 140 (427)
T 3dyd_A 104 EIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLAN 140 (427)
T ss_dssp HHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcC
Confidence 666666544 4443333447888999999888777654
No 132
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=22.60 E-value=21 Score=28.11 Aligned_cols=36 Identities=3% Similarity=-0.051 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+.+++.+|.... -.+||+||++++..++.++|.
T Consensus 89 ~l~~~la~~~~~~~~--~v~~~~gg~ea~~~a~~~~~~ 124 (433)
T 1zod_A 89 DLATRLANITPPGLD--RALLLSTGAESNEAAIRMAKL 124 (433)
T ss_dssp HHHHHHHHHSCTTCC--EEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcC--EEEEeCchHHHHHHHHHHHHH
Confidence 555677888775322 347888999999999877663
No 133
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=22.44 E-value=20 Score=27.38 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=25.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.+|.++. .-.++|+||+.++..++.+..+
T Consensus 71 ~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~ 107 (367)
T 3euc_A 71 ALRAKLKEVMQVPAG-MEVLLGNGSDEIISMLALAAAR 107 (367)
T ss_dssp HHHHHHHHHHTCCTT-CEEEEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCCc-ceEEEcCCHHHHHHHHHHHHcC
Confidence 455677888888522 2337889999999888776643
No 134
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=21.97 E-value=21 Score=25.37 Aligned_cols=24 Identities=17% Similarity=0.106 Sum_probs=20.0
Q ss_pred CCCCCCCCceeeCCCCCCHHHHHH
Q psy866 23 VTHWQHPRFHAYFPSGNSYPSVLA 46 (132)
Q Consensus 23 ~~~~~hPrf~a~~ps~~s~~s~lg 46 (132)
.....+|.|-||||+.+-.|+++-
T Consensus 25 ~v~~~e~~F~GHFPg~PVmPGVl~ 48 (129)
T 3esi_A 25 QVDPDLFWFNGHFTGQPLLPGVAQ 48 (129)
T ss_dssp ECCTTSGGGCTTTBSSCCCCHHHH
T ss_pred EeCCCCchhcCCCCCCCcCCcHHH
Confidence 455689999999999999998854
No 135
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=21.61 E-value=20 Score=28.42 Aligned_cols=32 Identities=6% Similarity=-0.004 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~A 110 (132)
...+++++++|.+ .. ++++||++++..++.+.
T Consensus 60 ~l~~~la~~~g~~---~~-~~~~~gt~a~~~al~~l 91 (412)
T 2cb1_A 60 ALEERLKALEGAL---EA-VVLASGQAATFAALLAL 91 (412)
T ss_dssp HHHHHHHHHHTCS---EE-EEESSHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC---cE-EEECCHHHHHHHHHHHH
Confidence 5677888998865 23 78999999999988765
No 136
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=21.39 E-value=56 Score=24.04 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhCCCC
Q psy866 74 AYKRSFFVRMVSDPK 88 (132)
Q Consensus 74 ~~vi~Wl~~~lGlP~ 88 (132)
..|.+||++-+++|+
T Consensus 84 edV~~WL~~~v~Lpq 98 (150)
T 2k60_A 84 DEVVQWLITYVELPQ 98 (150)
T ss_dssp HHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHcCCcHH
Confidence 379999999999996
No 137
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=21.32 E-value=24 Score=27.60 Aligned_cols=33 Identities=15% Similarity=0.026 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+++++++|.+ .. +++++|++++..++.+..
T Consensus 68 ~l~~~la~~~g~~---~~-i~~~sG~~a~~~~l~~~~ 100 (398)
T 2rfv_A 68 ALEKKLAVLERGE---AG-LATASGISAITTTLLTLC 100 (398)
T ss_dssp HHHHHHHHHHTCS---EE-EEESSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCC---cE-EEECCHHHHHHHHHHHHh
Confidence 6778999999976 23 778888899988877653
No 138
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=21.18 E-value=23 Score=27.25 Aligned_cols=31 Identities=13% Similarity=0.029 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 77 RSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 77 i~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+++.+|.+ .. +++++||.++..++.+++
T Consensus 41 ~~~la~~~~~~---~~-~~~~sGt~al~~al~~~~ 71 (367)
T 3nyt_A 41 EDRLADFVGAK---YC-ISCANGTDALQIVQMALG 71 (367)
T ss_dssp HHHHHHHHTCS---EE-EEESCHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCC---cE-EEeCCHHHHHHHHHHHhC
Confidence 34566666765 23 889999999999988874
No 139
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=21.15 E-value=36 Score=26.28 Aligned_cols=31 Identities=10% Similarity=0.160 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 77 RSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 77 i~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
.+.+++.+|.+ .. +++++||.++..++.+.|
T Consensus 40 ~~~la~~~~~~---~~-i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 40 ETQFAKTFGSK---YA-VMVSSGSTANLLMIAALF 70 (390)
T ss_dssp HHHHHHHHTCS---EE-EEESCHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCC---cE-EEECCHHHHHHHHHHHHH
Confidence 34556666765 23 889999999999888874
No 140
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=21.11 E-value=20 Score=28.01 Aligned_cols=33 Identities=9% Similarity=-0.128 Sum_probs=25.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASS 110 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~A 110 (132)
.+.+++++++|.++ -.+||+|||.++..++...
T Consensus 39 ~~~~~l~~~~~~~~---~v~~~~sgt~a~~~~~~~~ 71 (379)
T 3ke3_A 39 DLLSNLKTVYNAEA---AVIIPGSGTYGMEAVARQL 71 (379)
T ss_dssp HHHHHHHHHHTCSE---EEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC---EEEEcCChhHHHHHHHHhC
Confidence 68889999999872 3367789999988876544
No 141
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=20.89 E-value=49 Score=25.40 Aligned_cols=32 Identities=9% Similarity=-0.089 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhh
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLA 108 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~ 108 (132)
...+++++++|.+.. .- ++|+|++.++..++.
T Consensus 73 ~l~~~la~~~g~~~~-~v-~~~~g~t~al~~~~~ 104 (406)
T 3cai_A 73 AAREAVADLVNADPG-GV-VLGADRAVLLSLLAE 104 (406)
T ss_dssp HHHHHHHHHHTCCGG-GE-EEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC-eE-EEeCChHHHHHHHHH
Confidence 688899999998533 23 788899988776654
No 142
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=20.85 E-value=25 Score=26.87 Aligned_cols=34 Identities=3% Similarity=-0.098 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
...+++++.+|.++ . +++++|+.++..++.+..+
T Consensus 92 ~l~~~la~~~~~~~---~-i~~~sGt~a~~~~l~~~~~ 125 (399)
T 3tqx_A 92 ELEKDISEFLGTDD---T-ILYSSCFDANGGLFETLLG 125 (399)
T ss_dssp HHHHHHHHHHTCSE---E-EEESCHHHHHHTTHHHHCC
T ss_pred HHHHHHHHHHCCCc---E-EEECchHHHHHHHHHHhcC
Confidence 66778889999863 3 6777778899887765543
No 143
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=20.16 E-value=32 Score=25.88 Aligned_cols=33 Identities=6% Similarity=0.081 Sum_probs=23.1
Q ss_pred HHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhcccc
Q psy866 76 KRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSAE 112 (132)
Q Consensus 76 vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR~ 112 (132)
..+.+++.+|.++ . +++++|++++..++.+..+
T Consensus 43 l~~~la~~~g~~~---~-~~~~~gt~a~~~~~~~~~~ 75 (347)
T 1jg8_A 43 LERLAAETFGKEA---A-LFVPSGTMGNQVSIMAHTQ 75 (347)
T ss_dssp HHHHHHHHHTCSE---E-EEESCHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCce---E-EEecCcHHHHHHHHHHhcC
Confidence 4457777778642 2 7888999998887766433
No 144
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=20.10 E-value=23 Score=28.38 Aligned_cols=33 Identities=6% Similarity=0.091 Sum_probs=24.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCcchhhhhccc
Q psy866 75 YKRSFFVRMVSDPKIYNPKIAVATPTSRRPTCLASSA 111 (132)
Q Consensus 75 ~vi~Wl~~~lGlP~~~~G~i~tsGgs~anl~aL~~AR 111 (132)
...+.+++.+|. + -.+|++||++||..++.++|
T Consensus 111 ~l~~~la~~~g~-~---~v~~~~sGseA~~~al~~a~ 143 (433)
T 1z7d_A 111 ICERYLTNLLGY-D---KVLMMNTGAEANETAYKLCR 143 (433)
T ss_dssp HHHHHHHHHHTC-S---EEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCC-C---eEEEeCCHHHHHHHHHHHHH
Confidence 445567777773 2 23789999999999999887
Done!