RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8662
(260 letters)
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 191 bits (487), Expect = 4e-61
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Query: 141 GKSFSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPK 200
+++ T V GWG ++GGS LL+ VP +S+A C+ ++ + M+CAGY
Sbjct: 104 TTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDT 163
Query: 201 GEKDSCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
++D+CQGDSGGP+ + VG+VSWGEGCA++ GVY V+ + + I +
Sbjct: 164 KQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAA 221
Score = 70.7 bits (174), Expect = 7e-15
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
+VGG ++P+M L CG L VLTAAHCV
Sbjct: 1 VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCVS 40
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 189 bits (483), Expect = 2e-60
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 144 FSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEK 203
+G V+GWG G ++ L + VP++ A C + + + IT NM CAG+ +G +
Sbjct: 120 LKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLR-STKFTITNNMFCAGFHEGGR 178
Query: 204 DSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSCQGDSGGP E + G++SWGE CA + G+Y +V+RY+ WIK T
Sbjct: 179 DSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKT 232
Score = 78.4 bits (194), Expect = 1e-17
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 131
+VGG+ Q+PW +L K +CG +++N +++TAAHCV
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVET 45
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 189 bits (483), Expect = 3e-60
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 144 FSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEK 203
+ KTGIV+G+G + G S L +EVP + CK + IT NM CAGY ++
Sbjct: 120 MTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKL-SSSFIITQNMFCAGYDTKQE 178
Query: 204 DSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
D+CQGDSGGP + + + G+VSWGEGCA++ G+Y +V +L WI +
Sbjct: 179 DACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232
Score = 74.2 bits (183), Expect = 4e-16
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 87 IVGGQVTYVHQYPWMALLM-YKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTI 139
IVGGQ + PW ALL+ + +CG T+++ Y+LTAAHC++Q V +
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRV 54
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 188 bits (480), Expect = 6e-60
Identities = 53/109 (48%), Positives = 75/109 (68%)
Query: 150 IVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
IVTGWG +GG+T D L +V VP++S+ +C+ + I +M+CAG P+G KDSCQGD
Sbjct: 129 IVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGD 188
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNTI 258
SGGPL ++ ++ G+VSWG GCA+ YPGVY V+ ++ WIK N +
Sbjct: 189 SGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANAV 237
Score = 69.5 bits (171), Expect = 2e-14
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVH 130
IVGG + ++P+ +CGA++ N Y +TA HCV+
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVY 48
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 185 bits (473), Expect = 7e-59
Identities = 52/112 (46%), Positives = 68/112 (60%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
+ + GWG G+T+D L E +VP+LSN C++ E IT NM+CAGY +G D
Sbjct: 122 PGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGID 181
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
SCQGDSGGPL + GV S+G CA N PGVYARV+R+ WI++
Sbjct: 182 SCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSF 233
Score = 76.1 bits (188), Expect = 8e-17
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
IVGG +PW+ L Y R CGA+L+++ ++++AAHCV+
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVY 44
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 183 bits (467), Expect = 7e-58
Identities = 50/113 (44%), Positives = 71/113 (62%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
VTGWG K+ G + L +V +P+++N EC+K + +IT M+CAGY +G KD
Sbjct: 123 IYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKD 182
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
+C+GDSGGPL + + +VG+ SWGEGCA+ PGVY +V Y+ WI T
Sbjct: 183 ACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235
Score = 68.0 bits (167), Expect = 8e-14
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCVH 130
IVGG + ++PW L K +R CG +LI + +VLTAAHC
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFD 47
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 182 bits (463), Expect = 3e-57
Identities = 52/107 (48%), Positives = 71/107 (66%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
VTGWG +K +TL + ++P+++N EC+K ++IT M+CAGY +G KD+C+GDS
Sbjct: 129 VTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDS 188
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
GGPL + V H+VG+ SWGEGCAQ PGVY V Y+ WI T
Sbjct: 189 GGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235
Score = 65.7 bits (161), Expect = 5e-13
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCVH 130
IVGG + ++PW L +R CG ++I N ++LTAAHC +
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFY 47
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 182 bits (463), Expect = 4e-57
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT----AYENRITPNMLCAGYPK 200
+ +V+GWG G+T+ L+ + VP L +C + IT M CAGY
Sbjct: 123 FVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSD 182
Query: 201 GEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
G KDSC+GDSGGP ++ G+VSWG+GCA + GVY RV++Y+ W++
Sbjct: 183 GSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239
Score = 76.5 bits (189), Expect = 7e-17
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 131
IVGG+V + PW LL+ CG TLIN ++V++AAHC +
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDK 45
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 180 bits (459), Expect = 1e-56
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
+ K VTGWG + GG+ + L + E+ +++ C+ +ITP M+C G+ G D
Sbjct: 127 AGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCEN-LLPQQITPRMMCVGFLSGGVD 185
Query: 205 SCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
SCQGDSGGPL GVVSWG+GCAQ N PGVY R+ + WIK NT
Sbjct: 186 SCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT 239
Score = 66.9 bits (164), Expect = 2e-13
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRF-YCGATLINNLYVLTAAHCVH 130
+VGG ++PW L + CGA+LI+ ++++AAHC
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYI 45
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 178 bits (455), Expect = 2e-56
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 145 SNKTGIVTGWGVQKQGGSTS-DTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEK 203
+ + V GWG +GGS++ LL+V VPI+S A C+ + IT M CAG G K
Sbjct: 114 AGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGK 173
Query: 204 DSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
DSCQGDSGGP+ ++ T+ +G VSWG GCA+ NY GVYA V ++I
Sbjct: 174 DSCQGDSGGPIVDSSNTL---IGAVSWGNGCARPNYSGVYASVGALRSFIDTY 223
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 178 bits (454), Expect = 5e-56
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEK 203
VTG+G K G + + L + +V ++ C + AY + ITP MLCAG +G+
Sbjct: 116 PGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKT 175
Query: 204 DSCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
D+CQGDSGGPL ++ + ++ G+VSWG+ CA+ N PGVY RV WI + T
Sbjct: 176 DACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 230
Score = 73.4 bits (181), Expect = 8e-16
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
IVGG ++PW A L + CGATLIN ++++AAHC
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFT 44
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 177 bits (451), Expect = 2e-55
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 141 GKSFSNKTGIVTGWGVQKQGG-STSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYP 199
+ + +GWG GG L V + I +NA C + I +M+CA
Sbjct: 116 ANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDN 175
Query: 200 KGE--KDSCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
G +DSCQGDSGGPL + + + +VG+VSWG GCA YPGVY+RV + WI +
Sbjct: 176 TGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCAS-GYPGVYSRVGFHAGWITDT 234
Query: 257 T 257
Sbjct: 235 I 235
Score = 71.9 bits (177), Expect = 4e-15
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 87 IVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAAHCVH 130
IVGG +++PW + K +CG ++IN+ +V+ AAHC+
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQ 46
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 177 bits (450), Expect = 3e-55
Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT--AYENRITPNMLCAGYPKGE 202
IV+GWG ++ +TL+E+E+PI+ ++ C+K + ++T +M+CAG +G
Sbjct: 132 EGAMVIVSGWG-KQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGG 190
Query: 203 KDSCQGDSGGPLHYANET--VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
KD+C GDSGGP+ N ++VG VSWG+ C +++ GVY+ ++ WI+ T
Sbjct: 191 KDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVT 247
Score = 70.4 bits (173), Expect = 1e-14
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK-RFYCGATLINNLYVLTAAHCVHQ 131
I G+ PW+A+L + + +CG +L+ + +++TAAHC+HQ
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQ 46
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 176 bits (449), Expect = 5e-55
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 144 FSNKTGIVTGWGVQKQGGSTS-----DTLLEVEVPILSNAECKKTAYENRITPNMLCAGY 198
+ + +VTGWG + L +++P++ + EC + N ++ NMLCAG
Sbjct: 121 QAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSE-VMSNMVSENMLCAGI 179
Query: 199 PKGEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
+D+C+GDSGGP+ + +VG+VSWGEGC + GVY +V+RYL WI +
Sbjct: 180 LGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238
Score = 70.8 bits (174), Expect = 1e-14
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 87 IVGGQVTYVHQYPWMA-LLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTI 139
++ G++T PW LL KK+ CGA LI+ +VLTAAHC+ + + V +
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRL 54
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 183 bits (467), Expect = 3e-54
Identities = 52/107 (48%), Positives = 71/107 (66%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
VTGWG +K +TL + ++P+++N EC+K ++IT M+CAGY +G KD+C+GDS
Sbjct: 516 VTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDS 575
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
GGPL + V H+VG+ SWGEGCAQ PGVY V Y+ WI T
Sbjct: 576 GGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622
Score = 76.4 bits (188), Expect = 5e-16
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 54 TNQEESTPPEPVKPVDLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYK---KRF 110
+ + + L C K RIVGG + ++PW L +R
Sbjct: 355 SPTKILHGRGGISGYTLRLCKMDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRH 414
Query: 111 YCGATLINNLYVLTAAHCVH 130
CG ++I N ++LTAAHC +
Sbjct: 415 LCGGSIIGNQWILTAAHCFY 434
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 174 bits (443), Expect = 3e-54
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQG 208
+ GWG + S S +L E VP++++ +C Y I+PNMLCAGY + D+CQG
Sbjct: 130 IAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQG 189
Query: 209 DSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSGGPL V ++ G++SWG+GC + + PGVY RV Y+ WI +
Sbjct: 190 DSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 238
Score = 66.9 bits (164), Expect = 2e-13
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
I+GG + +PW+A + Y +C +L++ +V++AAHC
Sbjct: 1 IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFS 43
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 174 bits (443), Expect = 3e-54
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQG 208
+TG+G + + L V ++S+ EC++ Y + +T MLCA P+ + DSCQG
Sbjct: 137 ITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQG 196
Query: 209 DSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSGGPL + + + G+VSWG GCA ++ PGVY RV+ +L WI+++T
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 245
Score = 64.6 bits (158), Expect = 1e-12
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKR-----FYCGATLINNLYVLTAAHCVH 130
I+GG+ T + PW A + + R + CG +LI+ +V++A HC
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFI 49
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 175 bits (445), Expect = 4e-54
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQG 208
+TG+G + + L V ++S+ EC++ Y + +T MLCA P+ + DSCQG
Sbjct: 160 ITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQG 219
Query: 209 DSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSGGPL + + + G+VSWG GCA ++ PGVY RV+ +L WI+++T
Sbjct: 220 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 268
Score = 82.4 bits (204), Expect = 8e-19
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 66 KPVDLEKCGPCTCG--AVNKKTRIVGGQVTYVHQYPWMALLMYKKR-----FYCGATLIN 118
KP + CG + + +I+GG+ T + PW A + + R + CG +L++
Sbjct: 1 KPSSPPEELKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMS 60
Query: 119 NLYVLTAAHCVH 130
+V++A HC
Sbjct: 61 PCWVISATHCFI 72
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 174 bits (444), Expect = 7e-54
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQG 208
+ GWG + S S +L E VP++++ +C Y I+PNMLCAGY + D+CQG
Sbjct: 165 IAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQG 224
Query: 209 DSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSGGPL V ++ G++SWG+GC + + PGVY RV Y+ WI +
Sbjct: 225 DSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273
Score = 78.9 bits (195), Expect = 1e-17
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 60 TPPEPVKPVDLEKCGPCTCGAVNKK-----TRIVGGQVTYVHQYPWMALLMYKKRFYCGA 114
+P + G CG +KK RI+GG + +PW+A + Y +C
Sbjct: 4 SPDLLATLPEPASPGRQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAG 62
Query: 115 TLINNLYVLTAAHCVH 130
+L++ +V++AAHC
Sbjct: 63 SLVHTCWVVSAAHCFS 78
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 172 bits (439), Expect = 1e-53
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT---AYENRITPNMLCAGYPKG 201
+ T +++GWG + D L + +P+++ A+C I N +C P G
Sbjct: 123 AGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAG 182
Query: 202 EKDSCQGDSGGPLHYANETVHHIVGVVSW----GEGCAQENYPGVYARVNRYLTWIKNNT 257
+C GDSGGPL+ + +VGV SW G G +YP VY RV+ YL WI +N+
Sbjct: 183 NTGACNGDSGGPLNCPDGG-TRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDNS 241
Score = 68.0 bits (167), Expect = 7e-14
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCVH 130
++GG ++PW + CGA+L+++ L+A+HCV
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVD 47
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 172 bits (438), Expect = 2e-53
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKK-----TAYENRITPNMLCAGYP 199
++ G +GWG Q G + L+ V++PI+ + +C +T NMLCAG
Sbjct: 120 TDDIGTASGWG-LTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLE 178
Query: 200 KGEKDSCQGDSGGPLHYANET--VHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKNN 256
G KDSC+GDSGG L + + + G+VSWG C + GVY +V Y+ WI+N
Sbjct: 179 SGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 238
Query: 257 T 257
Sbjct: 239 I 239
Score = 71.5 bits (176), Expect = 4e-15
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 131
I GGQ +PW L++ L+ + +VLTAAH V++
Sbjct: 1 IYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYE 43
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 173 bits (440), Expect = 2e-52
Identities = 50/118 (42%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEK 203
K VTGWG + G + L E VPI+SN C Y N+I P M CAGYP+G
Sbjct: 242 DGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGI 301
Query: 204 DSCQGDSGGPLHYANETVH----HIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
D+CQGDSGGP + + G+VSWG GCA PGVY +V+ + WI
Sbjct: 302 DACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAI 359
Score = 79.4 bits (196), Expect = 2e-17
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 76 CTCGA-VNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
CG RIVGG+ T + ++PW L Y CG +L++ +VLTAAHC
Sbjct: 106 QDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFP 161
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 169 bits (431), Expect = 2e-52
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKG------E 202
++G+G + S+ L E V + ++ C +T NMLCAG +
Sbjct: 136 LSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANL 195
Query: 203 KDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
D+CQGDSGGPL N+ +VG++SWG GC Q++ PGVY +V YL WI++N
Sbjct: 196 HDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNM 250
Score = 65.8 bits (161), Expect = 6e-13
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 87 IVGGQVTYVHQYPWMALLMYK------KRFYCGATLINNLYVLTAAHCVH 130
I GG + +PW A + K +RF CG LI++ ++L+AAHC
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQ 50
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 170 bits (432), Expect = 3e-52
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 142 KSFSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT--AYENRITPNMLCAGYP 199
+ + V GWG + + G S ++ VP++ +C KT A R+ + LCAG
Sbjct: 160 EVQVGQRLTVVGWG-RTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGE 218
Query: 200 KGEKDSCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
K KDSC GDSGGPL + G+VS+G C E +PG+Y +V +Y WI+ N
Sbjct: 219 KA-KDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGNI 276
Score = 96.6 bits (241), Expect = 4e-24
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 75 PCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK-----RFYCGATLINNLYVLTAAHCV 129
P CG + +I+ G T ++PW A++ YK +F CG +LINN Y++TAAHCV
Sbjct: 11 PNDCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV 70
Query: 130 H 130
Sbjct: 71 A 71
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 167 bits (425), Expect = 1e-51
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
+ +V+G+G + L ++ ++ EC+ ++ + CA
Sbjct: 120 TGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQK--VGVS 177
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
GD+G P + +VGV ++ E P V+ +V Y++WI++
Sbjct: 178 LESGDAGDPTVQQDT----LVGVAAYFPKRP-EGAPEVFTKVGSYVSWIQDII 225
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 167 bits (425), Expect = 1e-51
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V+GWG + S+ L + +PILS ++C +Y IT M CAGY +G KDSCQGDS
Sbjct: 118 VSGWGNTMSSTADSNKLQCLNIPILSYSDCNN-SYPGMITNAMFCAGYLEGGKDSCQGDS 176
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNTIDA 260
GGP+ E + GVVSWG GCA+ PGVYA+V + W+ +T+ +
Sbjct: 177 GGPVVCNGE----LQGVVSWGYGCAEPGNPGVYAKVCIFNDWLT-STMAS 221
Score = 66.4 bits (163), Expect = 2e-13
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
IVGG + P L +CG +L+N +V++AAHC
Sbjct: 1 IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY 42
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 167 bits (425), Expect = 2e-51
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 145 SNKTGIVTGWG------VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGY 198
+ G VTGWG G L V +PI+ CK + RIT NM CAGY
Sbjct: 132 AGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD-STRIRITDNMFCAGY 190
Query: 199 PKGE---KDSCQGDSGGPLHYANET--VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWI 253
E D+C+GDSGGP + + +G+VSWGEGC ++ G Y V R WI
Sbjct: 191 KPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI 250
Query: 254 KNNT 257
+
Sbjct: 251 QKVI 254
Score = 73.1 bits (180), Expect = 2e-15
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 87 IVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAAHCVHQ 131
IV G + PW +L K + CGA+LI++ +VLTAAHC+
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLY 47
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 166 bits (423), Expect = 8e-51
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 145 SNKTGIVTGWG------VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGY 198
+ G VTGWG G L V +PI+ CK + RIT NM CAGY
Sbjct: 162 AGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD-STRIRITDNMFCAGY 220
Query: 199 PKGE---KDSCQGDSGGPLHYANET--VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWI 253
E D+C+GDSGGP + + +G+VSWGEGC ++ G Y V R WI
Sbjct: 221 KPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI 280
Query: 254 KNNT 257
+
Sbjct: 281 QKVI 284
Score = 84.0 bits (208), Expect = 3e-19
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 69 DLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAA 126
LE RIV G + PW +L K + CGA+LI++ +VLTAA
Sbjct: 13 SLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAA 72
Query: 127 HCVHQ 131
HC+
Sbjct: 73 HCLLY 77
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 164 bits (418), Expect = 1e-50
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 10/117 (8%)
Query: 146 NKTGIVTGWGVQKQGGST-SDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
+++GWG G+ D L ++ P+LS A+C+ +Y +IT NM C G+ +G KD
Sbjct: 117 GTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEA-SYPGKITSNMFCVGFLEGGKD 175
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIK----NNT 257
SCQGDSGGP+ + GVVSWG+GCAQ+N PGVY +V Y+ WIK N+
Sbjct: 176 SCQGDSGGPVV----CNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS 228
Score = 71.0 bits (175), Expect = 5e-15
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 87 IVGGQVTYVHQYPWMALLM-YKKRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
IVGG + PW ALL+ + +CG T+++ Y+LTAAHC++Q V
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKV 52
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 164 bits (418), Expect = 1e-50
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 145 SNKTGIVTGWGVQKQGG-STSDTLLEVEVPILSNAECKK----TAYENRITPNMLCAGYP 199
+ + +V+GWG S L+E ++ C++ + I + CAG
Sbjct: 116 PDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGE 175
Query: 200 KGEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
E GD+G P +VGV S+ +P V+ RV Y+ IK+
Sbjct: 176 YDETYIGYGDAGDPAVQNGT----LVGVASYISSMPS-EFPSVFLRVGYYVLDIKD 226
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 165 bits (420), Expect = 3e-50
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 151 VTGWGVQKQGGS-TSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQG 208
V GWG ++ TS L E V ++ C T Y RI +CAGYP+G+ D+CQG
Sbjct: 138 VAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQG 197
Query: 209 DSGGPLHYANETVH--HIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
DSGGPL + + +VG+ SWG GCA+ PGVY YL WI +
Sbjct: 198 DSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248
Score = 61.6 bits (150), Expect = 2e-11
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 87 IVGGQVTYVHQYPWMALLMYK------KRFYCGATLINNLYVLTAAHCVH 130
I+GGQ +PWM L + CG +L+N+ ++LTAAHC
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFR 50
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 163 bits (415), Expect = 4e-50
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
V GWG + L + I+ N +C + + + + +CAG K C+GD
Sbjct: 120 VYGWG-YTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGD 178
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
GGPL + ++GV+ G GCA N PG++ RV Y WI
Sbjct: 179 YGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHK 224
Score = 59.6 bits (145), Expect = 7e-11
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
+V G T WM L Y+ + CG +LI +VLTA C
Sbjct: 1 VVNGIPT-RTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFP 43
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 167 bits (425), Expect = 8e-50
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKK-----TAYENRITPNMLCAGYP 199
++ G +GWG Q G + L+ V++PI+ + +C +T NMLCAG
Sbjct: 281 TDDIGTASGWG-LTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLE 339
Query: 200 KGEKDSCQGDSGGPLHYANET--VHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKNN 256
G KDSC+GDSGG L + + + G+VSWG C + GVY +V Y+ WI+N
Sbjct: 340 SGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 399
Query: 257 T 257
Sbjct: 400 I 400
Score = 77.9 bits (192), Expect = 1e-16
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 76 CTCG--AVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 131
CG A +I GGQ +PW L++ L+ + +VLTAAH V++
Sbjct: 149 PVCGLSARTTGGQIYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYE 204
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 163 bits (414), Expect = 8e-50
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
+TGWG + QG + L E ++P++ N C + R+ LCAG+ G DSCQGD
Sbjct: 138 ITGWG-ETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGD 196
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
+GGPL + + + GV SWG GCA+ N PGVY RV+R++TWI+
Sbjct: 197 AGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEG 242
Score = 66.5 bits (163), Expect = 3e-13
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 73 CGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKKRF-YCGATLINNLYVLTAAHCVHQ 131
CG R+VGG V + H +PW L + +CG TLI+ +VLTAAHC+ +
Sbjct: 4 CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 162 bits (412), Expect = 1e-49
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
+ GWG+ QGG S L E+++ +L C + + ++P+M+C ++ C+GD
Sbjct: 122 MAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGD 181
Query: 210 SGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKNNT 257
SGGPL V + GV+S+ C P V V Y++WI+ T
Sbjct: 182 SGGPLVCGKGRV--LAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228
Score = 71.1 bits (175), Expect = 6e-15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIW 136
I+GG+ H P+MA L CG L++ +VLTAAHC+ Q +
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQL 50
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 162 bits (412), Expect = 1e-49
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
+ GWG K G+ L + ++SN EC + R+ + +C +C+GD
Sbjct: 121 IAGWGETKGTGN-DTVLNVALLNVISNQECNI-KHRGRVRESEMCTEGLLAPVGACEGDY 178
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
GGPL + G++ CA+ +P V+ RV+ ++ WI
Sbjct: 179 GGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHK 223
Score = 53.8 bits (130), Expect = 7e-09
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 87 IVGGQVTYVHQYPWMA-LLMYKKRFYCGATLINNLYVLTAAHCVH 130
+VGG PW L + + +CG +L+ ++LTA C
Sbjct: 1 VVGGHP---GNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFS 42
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 160 bits (408), Expect = 3e-49
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 141 GKSFSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPK 200
+ + +TGWG + GG+T + L E+E+ + +C++ + R+ + +C +
Sbjct: 112 DEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCER--DQWRVIDSHICTLTKR 169
Query: 201 GEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
G + +C GDSGGPL +G+VS+G CA P VY RV+ +++WI N
Sbjct: 170 G-EGACHGDSGGPLVANGA----QIGIVSFGSPCAL-GEPDVYTRVSSFVSWINANL 220
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 160 bits (407), Expect = 5e-49
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 151 VTGWGVQKQGG-STSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
++GWG K G S D L ++ PILS++ CK AY +IT NM CAGY +G KDSCQGD
Sbjct: 118 ISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS-AYPGQITSNMFCAGYLEGGKDSCQGD 176
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
SGGP+ + + G+VSWG GCAQ+N PGVY +V Y++WIK
Sbjct: 177 SGGPVV-CSGK---LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQ 218
Score = 66.8 bits (164), Expect = 2e-13
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
IVGG + P+ L +CG +LIN+ +V++AAHC G+ + +
Sbjct: 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRL 50
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 163 bits (414), Expect = 4e-48
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 138 TIRGKSFSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAG 197
++ K+ T VTGWG + GS+SD LL+ VP+ + C + AY + + LC G
Sbjct: 249 ELKEKAEQISTYFVTGWGTTE-NGSSSDVLLQANVPLQPRSACSQ-AYRRAVPLSQLCVG 306
Query: 198 YPKGEKDSCQGDSGGPLHYANETVH------HIVGVVSWG-EGCAQENYPGVYARVNRYL 250
+DSC+GDSGGPL + + G+VS G C Q + PG+Y V Y+
Sbjct: 307 GGDL-QDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYV 365
Query: 251 TWIKNNT 257
WI +
Sbjct: 366 QWITDTM 372
Score = 98.8 bits (246), Expect = 4e-24
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 56 QEESTPPEPVKPVDLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK----RFY 111
+ K + L K CG R+ G + PWMALL Y++ RF
Sbjct: 89 CPSANIQHNSKVMSLFKDENFDCGNFLS-QRVSNGYEVKLSSRPWMALLRYQQFGESRFL 147
Query: 112 CGATLINNLYVLTAAHCVHQGLGIWVTIR 140
CG +I+ Y+LTAAHCVH IR
Sbjct: 148 CGGAMISERYILTAAHCVHGLQNDLYEIR 176
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 158 bits (403), Expect = 4e-48
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
TGWG + +T D L + +P+LSN CKK + +I M+CAG SC GD
Sbjct: 138 TTGWGLTRYTNANTPDRLQQASLPLLSNTNCKK-YWGTKIKDAMICAG--ASGVSSCMGD 194
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
SGGPL +VG+VSWG + PGVYARV + W++
Sbjct: 195 SGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 241
Score = 66.8 bits (164), Expect = 2e-13
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 73 CG-PCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKKRF-YCGATLINNLYVLTAAHCVH 130
CG P ++ +RIV G+ +PW L K F +CG +LIN +V+TAAHC
Sbjct: 1 CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGV 60
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 163 bits (414), Expect = 4e-48
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 145 SNKTGIVTGWGVQKQ------GGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGY 198
+ G VTGWG K+ G L V +PI+ CK + RIT NM CAGY
Sbjct: 297 AGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKD-STRIRITDNMFCAGY 355
Query: 199 PK---GEKDSCQGDSGGPLHYANET--VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWI 253
D+C+GDSGGP + + +G+VSWGEGC ++ G Y V R WI
Sbjct: 356 KPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI 415
Query: 254 KNNT 257
+
Sbjct: 416 QKVI 419
Score = 81.4 bits (201), Expect = 6e-18
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 70 LEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAAH 127
LE RIV G + PW +L K + CGA+LI++ +VLTAAH
Sbjct: 149 LEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAH 208
Query: 128 CVHQ 131
C+
Sbjct: 209 CLLY 212
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 158 bits (401), Expect = 5e-48
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT----AYENRITPNMLCAGYPK 200
G V+G+GV ++ + L V +P+ + C+ + + NM CAG+P
Sbjct: 124 LGLMGYVSGFGVMEEKIA--HDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 181
Query: 201 GEKDSCQGDSGGPL--HYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
++D+CQGDSGG N G+VSWG GC++ G Y +V Y+ WIK
Sbjct: 182 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEM 238
Score = 66.5 bits (163), Expect = 3e-13
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 131
I+GGQ + +PW G L+ + ++LTAAH ++
Sbjct: 1 IIGGQKAKMGNFPWQVFTNI--HGRGGGALLGDRWILTAAHTLYP 43
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 158 bits (401), Expect = 6e-48
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 151 VTGWGVQKQGG-STSDTLLEVEVPILSNAECKKTAY---ENRITPNMLCAGYPKGEKDSC 206
VTGWG SDTL EV V +LS C +Y + IT +M+CAG KG+KDSC
Sbjct: 127 VTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSC 186
Query: 207 QGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARV-NRYLTWIKNN 256
+GD+GGPL +VS G C PG+Y + +Y TWIK+N
Sbjct: 187 KGDAGGPLICKGV----FHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSN 233
Score = 73.0 bits (180), Expect = 1e-15
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 86 RIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
I+GG+ H P+MA + Y CG LI+ +VLTAAHC +
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQY 46
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 162 bits (411), Expect = 6e-48
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 140 RGKSFSNKTGIVTGWGVQKQG--GSTSDTLLEVEVPILSNAECK------KTAYENRITP 191
+ + F + +GWG ++ G S+ L ++++P + +C+ + + +
Sbjct: 255 QSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQ 314
Query: 192 NMLCAGYPKGEKDSCQGDSGGPLHY---ANETVHHIVGVVSWGEGCAQENYPGVYARVNR 248
+CAG +G KD+C GD G PL N + + +G+V+WG GC EN PGVYA V
Sbjct: 315 TFVCAGGEQG-KDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAH 373
Query: 249 YLTWIKNNT 257
+ WI
Sbjct: 374 FRNWIDQEM 382
Score = 81.8 bits (202), Expect = 4e-18
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 55 NQEESTPPEPVKPVDLEKCGPCTCGAVNKK---TRIVGGQ-VTYVHQYPWMALLMYK--- 107
+ P P + P CG N++ +I G ++PWM ++
Sbjct: 95 PEGGVLPTPSPTPPVVPVLKPSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVI 154
Query: 108 -----KRFYCGATLINNLYVLTAAHCVH 130
++ CG +LI VLT AHCV+
Sbjct: 155 PGSGEEQLVCGGSLIAPSVVLTGAHCVN 182
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 158 bits (401), Expect = 7e-48
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
+TGWG+ + G + TL + +P + A C + + + + +M+CAG G + CQGD
Sbjct: 129 ITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGD 187
Query: 210 SGGPLHYANETVHHIVGVVSWGE--GCAQENYPGVYARVNRYLTWIKN 255
SGGPLH + + GV S+ GC P V+ RV+ Y++WI N
Sbjct: 188 SGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINN 235
Score = 60.3 bits (147), Expect = 4e-11
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVH 130
+VGG + +P L Y+ CG TLI +V+TAAHCV
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD 48
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 158 bits (401), Expect = 8e-48
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAEC-KKTAYENRITPNMLCAGYPKGEKDSCQGD 209
VTGWG G + L + P++ A C ++ + + M+CAG G +C GD
Sbjct: 141 VTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG-DGVISACNGD 199
Query: 210 SGGPLHYANETVHHIVGVVSWGEG--CAQENYPGVYARVNRYLTWIKNNT 257
SGGPL+ + + G+VS+G G C P V+ RV+ Y+ WI
Sbjct: 200 SGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249
Score = 65.3 bits (160), Expect = 8e-13
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 78 CG----AVNKKTRIVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCV 129
CG N R+VGG+ H +PW L Y + R CG TLI +VLTAAHC+
Sbjct: 1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 130 H 130
Sbjct: 61 S 61
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 157 bits (400), Expect = 1e-47
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 151 VTGWGVQKQGGS--TSDTLLEVEVPILSNAECKK-------TAYENRITPNMLCAGYPKG 201
VTGWG S T L ++EVP++S C + + +M+CAGY +G
Sbjct: 126 VTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEG 185
Query: 202 EKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
KD+CQGDSGGPL E + ++ G+VSWG+ C N PGVY + Y +WI++
Sbjct: 186 GKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQS 239
Score = 64.2 bits (157), Expect = 2e-12
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
I GG Q+PW + Y+ CG +L++ +VL+AAHC
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFP 44
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 156 bits (397), Expect = 2e-47
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKT--AYENRITPNMLCAGYPKGEKDSCQ 207
+ GWG + G+ D V + +L C+ +E T LCAG +G KD+C+
Sbjct: 122 IMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCK 181
Query: 208 GDSGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKN 255
GDSGGPL + G+ SWG+ CAQ + P Y +V +L WI+N
Sbjct: 182 GDSGGPLICNGQ----FQGIASWGDDPCAQPHKPAAYTKVFDHLDWIEN 226
Score = 68.4 bits (168), Expect = 5e-14
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK--RFYCGATLINNLYVLTAAHCVHQGLGIWV 137
I+GG ++++ ++ L + +CG TLIN +VLTAAHC + I +
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRKNFRIKL 53
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 151 bits (385), Expect = 2e-47
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 161 GSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDSGGPLHYANET 220
+T D L + +P+LSN CKK + +I M+CAG SC GDSGGPL
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKK-YWGTKIKDAMICAGA--SGVSSCMGDSGGPLVCKKNG 57
Query: 221 VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
+VG+VSWG + PGVYARV + W++
Sbjct: 58 AWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 155 bits (395), Expect = 3e-47
Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
+ GWG G DT+ + ++S EC+ AY +IT NMLCAG K KDSCQGDS
Sbjct: 119 ILGWGKT-ADGDFPDTIQCAYIHLVSREECEH-AYPGQITQNMLCAGDEKYGKDSCQGDS 176
Query: 211 GGPLHYANETV--HHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKNNT 257
GGPL V H+ G+VSWG C + PGVY V RY WI+
Sbjct: 177 GGPL------VCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220
Score = 71.0 bits (175), Expect = 5e-15
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
+V G +P+ A L CG LI+ L+VLTAAHC
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK 43
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 163 bits (415), Expect = 3e-47
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
N T IV+GWG +K +L EV ++SN C K M CAG G D
Sbjct: 445 PNDTCIVSGWGREKDNER-VFSLQWGEVKLISN--CSKFYGNRFYEKEMECAGTYDGSID 501
Query: 205 SCQGDSGGPLHYANET-VHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
+C+GDSGGPL + V ++ GVVSWGE C + +PGVY +V Y WI +
Sbjct: 502 ACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555
Score = 73.8 bits (181), Expect = 4e-15
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 75 PCTCG----AVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
+CG ++ RIVGG+ + PW + CG I ++LTAAHC+
Sbjct: 306 KLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLR 365
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 155 bits (395), Expect = 4e-47
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+ GWG + + D + IL A C+ AY + LCAG +G KD+C+GD
Sbjct: 119 IMGWGTITSPNATLPDVPHCANINILDYAVCQA-AY-KGLAATTLCAGILEGGKDTCKGD 176
Query: 210 SGGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIK----NNTIDA 260
SGGPL + G++S G CAQ PG+Y +V Y WI+ NT
Sbjct: 177 SGGPLICNGQ----FQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISGNTDAT 228
Score = 70.3 bits (173), Expect = 1e-14
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
++GG ++++ ++AL+ Y CG TLIN +VLTA HC
Sbjct: 1 VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHCDR 43
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 155 bits (395), Expect = 4e-47
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG ++ + S D L V++ IL N ECKK A+ ++T MLC G+ +G KD+C GD
Sbjct: 131 ASGWGSIEPENFSFPDDLQCVDLKILPNDECKK-AHVQKVTDFMLCVGHLEGGKDTCVGD 189
Query: 210 SGGPLHYANETVHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKN 255
SGGPL + GV SWG C N P V RV Y+ WI++
Sbjct: 190 SGGPLMCDGV----LQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIED 232
Score = 71.9 bits (177), Expect = 3e-15
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
IVGG H PW A L + F CG L++ +VLTAAHC+
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCI 43
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 154 bits (393), Expect = 5e-47
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 151 VTGWGVQKQGGST-SDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
V+GWG T L+ V+V ++S +C K Y++ + +MLCAG P +K++C GD
Sbjct: 117 VSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTK-VYKDLLENSMLCAGIPDSKKNACNGD 175
Query: 210 SGGPLHYANETVHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKNN 256
SGGPL + G+VSWG C Q N PGVY +V ++ WI +
Sbjct: 176 SGGPLVCRGT----LQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDT 219
Score = 69.9 bits (172), Expect = 1e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+ G +PW L+ + +CG L+N +VLTAAHC
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCK 43
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 155 bits (394), Expect = 5e-47
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG ++D L EV++ + S +C ++N I +CAG P K+S GDS
Sbjct: 124 VAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIA-RFKNYIPFTQICAGDPSKRKNSFSGDS 182
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
GGPL G+VS+G P VY R++ +L+WI +
Sbjct: 183 GGPLVCNGV----AQGIVSYGRNDG--TTPDVYTRISSFLSWIHST 222
Score = 61.4 bits (150), Expect = 1e-11
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCV 129
I+GG H P+MA L++K K CG L+ +VLTAAHC+
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL 46
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 152 bits (387), Expect = 5e-47
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 151 VTGWGVQKQGGST---SDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQ 207
+GWG + G D + V++ +L N C A+ +++T +MLCAGY G KD+C
Sbjct: 43 ASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCAD-AHPDKVTESMLCAGYLPGGKDTCM 101
Query: 208 GDSGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKN 255
GDSGGPL G+ SWG C N P +Y ++ YL WI +
Sbjct: 102 GDSGGPLICNGM----WQGITSWGHTPCGSANKPSIYTKLIFYLDWIDD 146
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 155 bits (393), Expect = 8e-47
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
VTGWG + G++ D L + ++ ++ A C K + + + NM+CAG G SC GD
Sbjct: 129 VTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGD 187
Query: 210 SGGPLHYANET-VHHIVGVVSWGE--GCAQENYPGVYARVNRYLTWIKNNT 257
SGGPL+ + G+VS+G GC + P V+ RV+ Y+ WI +
Sbjct: 188 SGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238
Score = 59.5 bits (145), Expect = 8e-11
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVH 130
+VGG+ + +PW L Y R CG TL++ +VLTAAHC+
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS 48
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 154 bits (392), Expect = 8e-47
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG G S TL EV++ + + +C+ + LC G P+ +K S +GDS
Sbjct: 124 VAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
GGPL G+VS+G P +V+ ++ WIK
Sbjct: 184 GGPLVCNKV----AQGIVSYGRNNGM--PPRACTKVSSFVHWIKKT 223
Score = 62.5 bits (153), Expect = 6e-12
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMY---KKRFYCGATLINNLYVLTAAHCV 129
I+GG H P+MA LM K CG LI + +VLTAAHC
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW 46
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 155 bits (393), Expect = 8e-47
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG D L V + +L N +C K A+E ++T MLCAG G +C+ D
Sbjct: 133 ASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDK-AHEMKVTDAMLCAGEMDGGSYTCEHD 191
Query: 210 SGGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKNN 256
SGGPL + G+ SWG E C + P VY ++ ++ +WI+
Sbjct: 192 SGGPLICDGI----LQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRET 235
Score = 73.8 bits (182), Expect = 6e-16
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 85 TRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
V QV + PW + ++ CG L++ +VLTAAHC + +W+
Sbjct: 2 APPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWL 54
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 154 bits (392), Expect = 1e-46
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
+TGWG GG SD+L + +P + +A C + + + + M+CAG G C GD
Sbjct: 129 ITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGD 186
Query: 210 SGGPLHYANETVHHIVGVVSW--GEGCAQENYPGVYARVNRYLTWIKN 255
SGGPL+ +++ GV S+ GC P V+ RV+ Y++W+
Sbjct: 187 SGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234
Score = 61.1 bits (149), Expect = 2e-11
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVH 130
+VGG+V + +PW L YK CG +LI +V+TAAHCV
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD 48
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 153 bits (390), Expect = 2e-46
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
+ GWG + + D + I+ + C+ LCAG KG +D+C GDS
Sbjct: 122 IMGWG-KISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDS 180
Query: 211 GGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKN 255
GGPL E + G+V+ G E C Q P VY +V Y WI++
Sbjct: 181 GGPLICNGE----MHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQS 222
Score = 67.2 bits (165), Expect = 1e-13
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK--RFYCGATLINNLYVLTAAHCVHQGLGIWV 137
+VGG ++++P++ L +C LIN +VLTAAHC + + I +
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRNIRIKL 53
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 155 bits (394), Expect = 2e-46
Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
G+++GW + G ++L V ++ EC + +T C
Sbjct: 170 PRTRGLLSGWA--RNGTDLGNSLTTRPVTLVEGEECGQ-VLNVTVTTRTYCER---SSVA 223
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
+ G + + + GV+ + + + +V+RY W K
Sbjct: 224 AMHWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIM 275
Score = 68.2 bits (167), Expect = 1e-13
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 69 DLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK-RFYCGATLINNLYVLTAAH 127
D ++C P + + PW L + + +CG +I +VLT A
Sbjct: 37 DHKQCVPHDQC--ACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAK 94
Query: 128 CVHQGLGIWV 137
C I V
Sbjct: 95 CSLLHRNITV 104
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 153 bits (390), Expect = 2e-46
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG + D L V + +L N C K Y ++T MLCAG G KD+C+ D
Sbjct: 130 ASGWGSITPTRWQKPDDLQCVFITLLPNENCAK-VYLQKVTDVMLCAGEMGGGKDTCRDD 188
Query: 210 SGGPLHYANETVHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKN 255
SGGPL + G S+G C + P +Y + ++ +WIK+
Sbjct: 189 SGGPLICDGI----LQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKD 231
Score = 67.6 bits (166), Expect = 1e-13
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
+VGG + PW + Y+K CG L++ +VLTAAHC
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY 43
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 153 bits (390), Expect = 2e-46
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG G TL EV++ + + C+ + N +C G K + S + DS
Sbjct: 125 VAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
GGPL G+VS+G+ + P V+ RV +++WIK
Sbjct: 185 GGPLVCKRA----AAGIVSYGQTDG--SAPQVFTRVLSFVSWIKKT 224
Score = 60.2 bits (147), Expect = 3e-11
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCV 129
I+GG H P+MA + K + +CG L+ + +VLTAAHC
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK 47
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 156 bits (396), Expect = 3e-46
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT----AYENRITPNMLCAGYPK 200
G V+G+G + L V +P+ + C+ + + NM CAG+P
Sbjct: 213 LGLMGYVSGFG--VMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 270
Query: 201 GEKDSCQGDSGGPL--HYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
++D+CQGDSGG N G+VSWG GC++ G Y +V Y+ WIK
Sbjct: 271 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEM 327
Score = 73.6 bits (181), Expect = 2e-15
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 69 DLEKCGPCTCG----AVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLT 124
+ +C P CG V ++ RI+GGQ + +PW R G L+ + ++LT
Sbjct: 69 KIPRCLPV-CGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILT 125
Query: 125 AAHCVHQ 131
AAH ++
Sbjct: 126 AAHTLYP 132
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 153 bits (388), Expect = 3e-46
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
GWG TS TL EVE+ I+ C Y +C G P + + GDS
Sbjct: 125 AAGWGKTGVRDPTSYTLREVELRIMDEKACVD--YRYYEYKFQVCVGSPTTLRAAFMGDS 182
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNTID 259
GGPL A G+VS+G A+ P ++ RV+ Y+ WI I+
Sbjct: 183 GGPLLCAGV----AHGIVSYGHPDAK--PPAIFTRVSTYVPWIN-AVIN 224
Score = 61.0 bits (149), Expect = 2e-11
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCV 129
I+GG + H P+MA L R CG LI+ +VLTAAHC
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK 47
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 153 bits (388), Expect = 5e-46
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+ GWG + + D + +L +A C+ E LCAG +G KD+C GD
Sbjct: 120 IMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGD 179
Query: 210 SGGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKN 255
SGGPL + G+VS+G C Q PGVY +V Y WI++
Sbjct: 180 SGGPLICNGQ----FQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQS 222
Score = 72.2 bits (178), Expect = 2e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
++GG ++++ + F+C TLIN +VLTAAHC
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCD 43
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 152 bits (387), Expect = 6e-46
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
++GWG GG D L + +P + C + + + M+CAG + C GD
Sbjct: 129 ISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG--DTRSGCNGD 186
Query: 210 SGGPLHYANET-VHHIVGVVSW--GEGCAQENYPGVYARVNRYLTWIKN 255
SGGPL+ + GV S+ GC P V+ RV+ ++ WI
Sbjct: 187 SGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDE 235
Score = 51.1 bits (123), Expect = 7e-08
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 90 GQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVH 130
G+ + + W L Y+K CG +LI +V+TA HC+
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS 46
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 152 bits (386), Expect = 8e-46
Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKK---TAYENRITPNMLCAGYPKGEKDSCQ 207
V GWG S SDTL EVE+ I+ C + I NM+CAG +G +DSC
Sbjct: 122 VAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCN 181
Query: 208 GDSGGPLHYANETVHHIVGVVSWG--EGCAQENYPGVYARV-NRYLTWIKN 255
GDSG PL GV S+G C PGVY + ++L WI
Sbjct: 182 GDSGSPLLCEGV----FRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIM 228
Score = 67.2 bits (165), Expect = 1e-13
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+GG H P+M LL ++ C LI +VLTAAHC
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCN 43
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 152 bits (386), Expect = 8e-46
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 151 VTGWGVQKQGGST-SDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
V+GWG K L + + +LS C+ AY +I M CAG G +DSCQGD
Sbjct: 121 VSGWGTTKSPQVHFPKVLQCLNISVLSQKRCED-AYPRQIDDTMFCAGDKAG-RDSCQGD 178
Query: 210 SGGPLHYANETVHHIVGVVSWGE-GCAQENYPGVYARVNRYLTWIKNN 256
SGGP+ + G+VSWG+ CA+ N PGVY + ++ WI+
Sbjct: 179 SGGPVVCNGS----LQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQET 222
Score = 66.8 bits (164), Expect = 2e-13
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 87 IVGGQVTYVHQYPWMALLMYK-KRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
I+ G +H PW A L+ + + YCGA L++ ++LTAAHC + + +
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKVFRVRL 52
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 152 bits (386), Expect = 9e-46
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG S L V + +LSN +C + Y++ +T MLCAG +G KD+C GD
Sbjct: 128 ASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIE-TYKDNVTDVMLCAGEMEGGKDTCAGD 186
Query: 210 SGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKN 255
SGGPL + G+ S G CA+ P +YA++ ++ +WIK
Sbjct: 187 SGGPLICDGV----LQGITSGGATPCAKPKTPAIYAKLIKFTSWIKK 229
Score = 63.0 bits (154), Expect = 4e-12
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
IVGG + PW ++ + CG LI+ +V+TAAHC + +
Sbjct: 1 IVGGYKCEKNSQPWQVAVIN--EYLCGGVLIDPSWVITAAHCYSNNYQVLL 49
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 151 bits (384), Expect = 1e-45
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V+GWG+ G L V V ++S C K Y+ P+M CAG + +KDSC GDS
Sbjct: 120 VSGWGLL-ANGRMPTVLQCVNVSVVSEEVCSK-LYDPLYHPSMFCAGGGQDQKDSCNGDS 177
Query: 211 GGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKNN 256
GGPL + G+VS+G+ C Q PGVY + ++ WI+
Sbjct: 178 GGPLICNGY----LQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKT 220
Score = 69.1 bits (170), Expect = 2e-14
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+ G+ H PW A L+ + +C L++ +VL+AAHC
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF 43
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 154 bits (390), Expect = 2e-45
Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKD 204
G+++GW + G ++L V ++ EC + +T C
Sbjct: 211 PRTRGLLSGWA--RNGTDLGNSLTTRPVTLVEGEECGQ-VLNVTVTTRTYCER---SSVA 264
Query: 205 SCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
+ G + + + GV+ + + + +V+RY W K
Sbjct: 265 AMHWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIM 316
Score = 66.3 bits (162), Expect = 6e-13
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 72 KCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK-RFYCGATLINNLYVLTAAHCVH 130
+ + PW L + + +CG +I +VLT A C
Sbjct: 79 HKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSL 138
Query: 131 Q 131
Sbjct: 139 L 139
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 151 bits (384), Expect = 2e-45
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKK-TAYENRITPNMLCAGYPKGEKDSCQGD 209
V GWG+ G D+L V +P+L A C + T ++ IT ++CA +DSC+GD
Sbjct: 125 VAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNRRDSCKGD 182
Query: 210 SGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKN 255
+GGPL + GVV+ G C PG+Y RV Y WI +
Sbjct: 183 AGGPLVCGGV----LEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDS 225
Score = 71.0 bits (175), Expect = 5e-15
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+GG+ H P+MA + CG L+ +VL+AAHC+
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCL 43
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 151 bits (384), Expect = 2e-45
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG ++ + T L V++ ++SN C + + ++T MLCAG G K +C GD
Sbjct: 130 ASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQ-VHPQKVTKFMLCAGRWTGGKSTCSGD 188
Query: 210 SGGPLHYANETV--HHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKN 255
SGGPL V + G+ SWG E CA P +Y +V Y WIK+
Sbjct: 189 SGGPL------VCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKD 231
Score = 67.6 bits (166), Expect = 1e-13
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
IVGG H PW L+ + R CG L++ +VLTAAHC+
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIR 44
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 151 bits (384), Expect = 2e-45
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
+GWG + S TL VE+ + SN +C + AY ++T +LCA + C GD
Sbjct: 130 TSGWGLISTFTNRGSGTLQCVELRLQSNEKCAR-AYPEKMTEFVLCATHRDDSGSICLGD 188
Query: 210 SGGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKNN 256
SGG L G+ SWG CA N V+ +V + WIK
Sbjct: 189 SGGALICDGV----FQGITSWGYSECADFNDNFVFTKVMPHKKWIKET 232
Score = 68.4 bits (168), Expect = 6e-14
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+GG H PW + ++ F CG L++ +VLTAAHC+
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM 43
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 150 bits (382), Expect = 3e-45
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG SDTL EV++ ++ C + + LC G P+ K + +GDS
Sbjct: 125 VAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH--FRDFDHNLQLCVGNPRKTKSAFKGDS 182
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
GGPL A G+VS+G A P V+ R++ Y WI
Sbjct: 183 GGPLLCAGV----AQGIVSYGRSDA--KPPAVFTRISHYRPWINQ 221
Score = 61.4 bits (150), Expect = 2e-11
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMY----KKRFYCGATLINNLYVLTAAHCV 129
I+GG H P+MA L +CG LI +VLTAAHC
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA 47
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 150 bits (381), Expect = 4e-45
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG + +DTL EV++ + + +C + + + +C G + K + +GDS
Sbjct: 124 VAGWG-RVSMRRGTDTLREVQLRVQRDRQCLR-IFGSYDPRRQICVGDRRERKAAFKGDS 181
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
GGPL N G+VS+G+ P V+ RV+ +L WI+
Sbjct: 182 GGPLLCNNV----AHGIVSYGKSSGV--PPEVFTRVSSFLPWIRTT 221
Score = 61.8 bits (151), Expect = 9e-12
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCV 129
I+GG+ + H P+MA L + + CG L+ +VLTAAHC
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW 46
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 154 bits (392), Expect = 5e-45
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT----AYENRITPNMLCAGYPK 200
G V+G+GV ++ + L V +P+ + C+ + + NM CAG+P
Sbjct: 281 LGLMGYVSGFGVMEEKIA--HDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 338
Query: 201 GEKDSCQGDSGGPL--HYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNNT 257
++D+CQGDSGG N G+VSWG GC++ G Y +V Y+ WIK
Sbjct: 339 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEM 395
Score = 72.9 bits (179), Expect = 4e-15
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 64 PVKPVDLEKCGPCTCG----AVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINN 119
K + +C P CG V ++ +I+GGQ + +PW R G L+ +
Sbjct: 132 EQKGEKIPRCLPV-CGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGD 188
Query: 120 LYVLTAAHCVHQ 131
++LTAAH ++
Sbjct: 189 RWILTAAHTLYP 200
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 149 bits (380), Expect = 6e-45
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 151 VTGWG-VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGD 209
++GWG V + +TL EV I S +C++ AY +IT M+CAG G D+CQGD
Sbjct: 122 ISGWGTVTSPQENFPNTLNCAEVKIYSQNKCER-AYPGKITEGMVCAGSSNG-ADTCQGD 179
Query: 210 SGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKNNTID 259
SGGPL + G+ SWG C + PGVY ++ RY TWIK T+D
Sbjct: 180 SGGPLVCDGM----LQGITSWGSDPCGKPEKPGVYTKICRYTTWIK-KTMD 225
Score = 70.6 bits (174), Expect = 7e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHC 128
I+ G+ H PW A L +R CG L+ + +VLTAAHC
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHC 42
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 152 bits (385), Expect = 1e-44
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT--------AYENRITPNMLCA 196
G+++GWG + + + L +P+ +CK+ A TPNM+CA
Sbjct: 206 DGDLGLISGWG-RTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICA 264
Query: 197 GYPKGEKDSCQGDSGGPLH---YANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWI 253
G KG DSC+GDSGG ++T + G+VSWG C G+Y RV Y+ WI
Sbjct: 265 GGEKG-MDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT---YGLYTRVKNYVDWI 320
Query: 254 KNNT 257
Sbjct: 321 MKTM 324
Score = 78.3 bits (193), Expect = 5e-17
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 69 DLEKCGPCTCG----AVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLT 124
+L KC P CG +K RI+GG + +PW + G LIN +VLT
Sbjct: 62 ELPKCVPV-CGVPREPFEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLT 117
Query: 125 AAHCVHQ 131
AAH V
Sbjct: 118 AAHVVEG 124
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 148 bits (375), Expect = 3e-44
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 140 RGKSFSNKTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYP 199
F N V+GWG Q + + L ++ N C + I + +C
Sbjct: 114 LNNKFENIWATVSGWG---QSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTS 170
Query: 200 KGEKDSCQGDSGGPLHYANETVHHIVGVVSWG--EGCAQENYPGVYARVNRYLTWIKNNT 257
G K C GDSGGP +++ + +GVVS+ GC P ++RV Y+ WI+ NT
Sbjct: 171 DG-KSPCFGDSGGPFVLSDKNLL--IGVVSFVSGAGCES-GKPVGFSRVTSYMDWIQQNT 226
Score = 69.1 bits (170), Expect = 3e-14
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYK----KRFYCGATLINNLYVLTAAHCVH 130
I+ G Y +P+ A L +R +CG +LI+N ++LTAAHCVH
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVH 48
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 148 bits (376), Expect = 4e-44
Identities = 50/115 (43%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 151 VTGWGVQKQGGSTSD--TLLEVEVPILSNAECKK--------TAYENRITPNMLCAGYPK 200
VTGWG L +V+VPI+ N C I +MLCAG
Sbjct: 127 VTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN-- 184
Query: 201 GEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
++DSCQGDSGGPL GVVSWGEGCAQ N PG+Y RV YL WI +
Sbjct: 185 SQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH 239
Score = 60.3 bits (147), Expect = 4e-11
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFY---CGATLINNLYVLTAAHCVH 130
IVGGQ ++PW L + R++ CG +LI+ +VLTAAHCV
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVG 47
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 146 bits (371), Expect = 1e-43
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 144 FSNKTGIVTGWGVQKQGG-STSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGE 202
TGWG+ SD L +V+VPI+SNA+C Y +T +C G
Sbjct: 114 GVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDA-VY-GIVTDGNICIDSTGG- 170
Query: 203 KDSCQGDSGGPLHYANETVHHIVGVVSWGEG-CAQENYPGVYARVNRYLTWIKNNT 257
K +C GDSGGPL+Y G+ S+G + YP + RV +L WI+ T
Sbjct: 171 KGTCNGDSGGPLNYNGL----TYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222
Score = 75.6 bits (187), Expect = 1e-16
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWV 137
IVGG + +P A L ++CG +LI+ ++LTAAHC+ + V
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGFVDV 51
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 143 bits (362), Expect = 2e-42
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
V GWG Q+ GG S V V + +C+ PN +C G C GD
Sbjct: 125 VAGWGSQRSGGRLSRFPRFVNVTVTPEDQCR---------PNNVCTGVLTRRGGICNGDG 175
Query: 211 GGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKN 255
G PL GV S+ G P + RV + WI
Sbjct: 176 GTPLVCEGL----AHGVASFSLGPCG-RGPDFFTRVALFRDWIDG 215
Score = 67.9 bits (167), Expect = 6e-14
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTIR 140
IVGG+ Q+P++A + + R +CG LI+ +V+TAA C T+
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVV 54
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 141 bits (359), Expect = 6e-42
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
GWG+ + + L E+ V ++++ C++ + +C + C GDS
Sbjct: 124 AMGWGLLGRNRGIASVLQELNVTVVTS-LCRR---------SNVCTLVRGRQAGVCFGDS 173
Query: 211 GGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKN 255
G PL I G+ S+ GCA YP +A V +++ WI +
Sbjct: 174 GSPLVCNGL----IHGIASFVRGGCASGLYPDAFAPVAQFVNWIDS 215
Score = 71.0 bits (175), Expect = 5e-15
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 130
IVGG+ H +P+M L + +CGATLI +V++AAHCV
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVA 44
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 140 bits (356), Expect = 2e-41
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQGDS 210
GWG + L E+ V +++ P+ +C P+ + C GDS
Sbjct: 127 AMGWGRVGAHDPPAQVLQELNVTVVTFF----------CRPHNICTFVPRRKAGICFGDS 176
Query: 211 GGPLHYANETVHHIVGVVSWG-EGCAQENYPGVYARVNRYLTWIKNN 256
GGPL I G+ S+ GCA +P + RV Y+ WI++
Sbjct: 177 GGPLICDGI----IQGIDSFVIWGCATRLFPDFFTRVALYVDWIRST 219
Score = 61.8 bits (151), Expect = 1e-11
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKR---FYCGATLINNLYVLTAAHCVH--QGLGIWVT 138
IVGG H P+MA L + +CG TLI+ +VLTAAHC+ + V
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVV 57
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 148 bits (375), Expect = 5e-41
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 151 VTGWGVQKQGGSTSDTLLEVEVPILSNAECKKT-AYENRITPNMLCAGYPKGEKDSCQGD 209
+TGWG QG + L E ++P++ N C + R+ LCAG+ G DSCQGD
Sbjct: 682 ITGWGET-QGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGD 740
Query: 210 SGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYLTWIKNN 256
SGGPL + + + GV SWG GCA+ N PGVY RV+R++TWI+
Sbjct: 741 SGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 787
Score = 55.8 bits (134), Expect = 4e-09
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 64 PVKPVDLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALL-MYKKRFYCGATLINNLYV 122
P CG R+VGG V + H +PW L +CG TLI+ +V
Sbjct: 539 PQCAAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWV 598
Query: 123 LTAAHCVH 130
LTAAHC+
Sbjct: 599 LTAAHCLE 606
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 137 bits (346), Expect = 9e-38
Identities = 32/151 (21%), Positives = 50/151 (33%), Gaps = 38/151 (25%)
Query: 145 SNKTGIVTGWGVQKQG------------GSTSDTLLEVEVPILSNAEC------------ 180
+ + T QK+ L EV I + +
Sbjct: 339 ALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPG 398
Query: 181 --KKTAYENRITPNMLCAGY--PKGEKDSCQGDSGGPLHYANETVHHIVGVVSWG--EGC 234
K +TP LC G P + ++C+GDSGGPL + VGV+SWG + C
Sbjct: 399 YDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVC 458
Query: 235 AQEN--------YPGVYARVNRYLTWIKNNT 257
+ + + + L W+K
Sbjct: 459 KNQKRQKQVPAHARDFHINLFQVLPWLKEKL 489
Score = 69.2 bits (169), Expect = 1e-13
Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 71 EKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMY----KKRFYCGATLINNLYVLTAA 126
E CG + T H+ PW A + K C +++ +VLTAA
Sbjct: 204 ESQSLSLCG-----MVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAA 258
Query: 127 HCVHQGLG 134
HC
Sbjct: 259 HCFTVDDK 266
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 125 bits (314), Expect = 8e-33
Identities = 29/140 (20%), Positives = 45/140 (32%), Gaps = 33/140 (23%)
Query: 151 VTGWGVQKQGGST-------SDTLLEVEVPILSNAEC--------------KKTAYENRI 189
+ L EV I + + K +
Sbjct: 592 QQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVV 651
Query: 190 TPNMLCAGY--PKGEKDSCQGDSGGPLHYANETVHHIVGVVSWG--EGCAQEN------- 238
TP LC G P + ++C+GDSGGPL + VGV+SWG + C +
Sbjct: 652 TPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPA 711
Query: 239 -YPGVYARVNRYLTWIKNNT 257
+ + + L W+K
Sbjct: 712 HARDFHINLFQVLPWLKEKL 731
Score = 56.6 bits (136), Expect = 2e-09
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%)
Query: 76 CTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK----RFYCGATLINNLYVLTAAHCVHQ 131
CG + T H+ PW A + + C +++ +VLTAAHC
Sbjct: 451 SLCG-----MVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 505
Query: 132 GLG 134
Sbjct: 506 DDK 508
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 123 bits (311), Expect = 1e-32
Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 37/149 (24%)
Query: 145 SNKTGIVTGWGVQKQGGSTSD--TLLEVEVPI-----LSNAECKK------------TAY 185
T + + + L ++ I + C + T
Sbjct: 353 QGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDV 412
Query: 186 ENRITPNMLCAGYPKGEKDSCQGDSGGPLHYANETVHHIVGVVSWG-----EGCAQEN-- 238
+T LC+G + + C+G+SGG + VG+VSWG G A +N
Sbjct: 413 REVVTDQFLCSGTQED-ESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSR 471
Query: 239 ----------YPGVYARVNRYLTWIKNNT 257
+ + R W++ +
Sbjct: 472 KRAPRSKVPPPRDFHINLFRMQPWLRQHL 500
Score = 78.5 bits (193), Expect = 8e-17
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 52 FVTNQEESTPPEPVKPVDLEKCGPCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKKRFY 111
F+ ++ +D+ K CG + + + PW + K +
Sbjct: 194 FILQDTKALHQVFEHMLDVSKLTDTICG-----VGNMSANASDQERTPWHVTIKPKSQET 248
Query: 112 CGATLINNLYVLTAAHCVHQ 131
C LI++ +VLTAAHC
Sbjct: 249 CRGALISDQWVLTAAHCFRD 268
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 67.9 bits (167), Expect = 3e-15
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 87 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 129
I+GG+ + +PW + + F CG L+N +VLTAAHC
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK 43
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 87 IVGGQVTYVHQYPWMALLMYKK-RFYCGATLINNLYVLTAAHCV 129
IV G+ +PW L K +CG +LIN +V+TAAHC
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCG 44
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 58.8 bits (142), Expect = 1e-10
Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 54/218 (24%)
Query: 87 IVGG-----QVTYVHQYPWMALL-MYKKRFYCGATLINNLYVLTAAHCVH---QGLGIWV 137
+V G +V P+ ++ + C TLI +LT HCV+
Sbjct: 1 VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60
Query: 138 TIRGKSFSNKTGIVTGWGVQK---------QGGSTSD-TLLEVEVPILSNAECKKTAYEN 187
++ T + + + G S D +++ + I + +
Sbjct: 61 GSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIRQVT 120
Query: 188 RITP-NMLCAGYPKGEK---------------------------DSCQGDSGGPLHYANE 219
+T + +GYP + D+ G+SG + N
Sbjct: 121 NLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFSGNSGSAMLDQN- 179
Query: 220 TVHHIVGVVSWGEGCAQENYPGVYARVN-RYLTWIKNN 256
IVGV + G N + ++ +I
Sbjct: 180 --QQIVGVHNAGYSNGTING---GPKATAAFVEFINYA 212
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 47.4 bits (112), Expect = 9e-07
Identities = 29/184 (15%), Positives = 42/184 (22%), Gaps = 48/184 (26%)
Query: 108 KRFYCGATLINNLY---VLTAAHCVHQGL-GIWVTI-------RGKSFSNKTGIVTGWGV 156
F C A ++ + V TA HC+H G G + +
Sbjct: 19 GDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVT 78
Query: 157 QKQGGSTSDTLLEVEVPILSNAECKK----------TAYENRITPNMLCAGYPKGEKDSC 206
+ + D + +L A+ GYP +
Sbjct: 79 SAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNG 138
Query: 207 Q---------------------------GDSGGPLHYANETVHHIVGVVSWGEGCAQENY 239
Q G SGGP N T S+G
Sbjct: 139 QELHSCHGTATNDPMGSSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFLPNVM 198
Query: 240 PGVY 243
G Y
Sbjct: 199 FGPY 202
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 35.6 bits (81), Expect = 0.010
Identities = 8/54 (14%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Query: 91 QVTYVHQYPW-----MALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTI 139
Q+T + + + F ++ +LT H V G +
Sbjct: 10 QITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHAL 63
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 35.4 bits (80), Expect = 0.013
Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 10/111 (9%)
Query: 145 SNKTGIVTGWGVQKQGGSTSDTLLEVEVPI----LSNAECKKTAYENRITPNMLCAGYPK 200
GW + Q + + V S + A+ L +
Sbjct: 125 PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNVQWQP 184
Query: 201 GEKDSCQGDSGGPLHYANETVHHIVGVVSWGEG-CAQ--ENYPGVYARVNR 248
+ G SG P++ ++G + G C+ N Y RV
Sbjct: 185 SGGVTEPGSSGSPIYSPE---KRVLGQLHGGPSSCSATGTNRSDQYGRVFT 232
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 34.6 bits (79), Expect = 0.020
Identities = 8/55 (14%), Positives = 17/55 (30%), Gaps = 5/55 (9%)
Query: 91 QVTYVHQYPW-----MALLMYKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTIR 140
Q+T + + + F ++ +LT H V G ++
Sbjct: 10 QITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALK 64
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels,
thermophIle, kinetic stabilit thermostability, protein
folding; HET: 2AB; 1.44A {Thermobifida fusca}
Length = 186
Score = 32.1 bits (73), Expect = 0.11
Identities = 29/163 (17%), Positives = 46/163 (28%), Gaps = 48/163 (29%)
Query: 121 YVLTAAHCVHQGLGIWV---TIRGKSF-----------------------SNKTGIVTGW 154
TA HC G + T+ G F + T VTG
Sbjct: 29 GFATAGHCGSTGTRVSSPSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGS 88
Query: 155 G-------VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSCQ 207
V + G +T ++ ++ + Y + +
Sbjct: 89 QEAATGSSVCRSGATTGWRCGTIQ------SKNQTVRYAEGTVTGLTRTTAC-----AEG 137
Query: 208 GDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
GDSGGP ++ GV S G G + + +N L
Sbjct: 138 GDSGGPWLTGSQ----AQGVTSGGTGDCRSGGITFFQPINPLL 176
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.4 bits (70), Expect = 0.31
Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 34/133 (25%)
Query: 7 LDDVQHDEVPEVLDDG---------ISVVPGPMPVAAPHGFQDYTSW-F-----QELISG 51
L +VQ+ + + V H D+ S + L+
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 52 FVTNQEESTPPEPVK--PVDLEKCG------PCTCG-----AVNKKTRIVGGQVTYVHQY 98
++ + + P E + P L T +K T I+ + +
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII--ESSLNVLE 367
Query: 99 PWMALLMYKKRFY 111
P Y+K F
Sbjct: 368 P----AEYRKMFD 376
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second
tetrahedral inter tetrapeptide, beta barrels, alpha
helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus}
SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E
2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E
2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E
...
Length = 185
Score = 30.6 bits (69), Expect = 0.34
Identities = 31/174 (17%), Positives = 43/174 (24%), Gaps = 49/174 (28%)
Query: 112 CGATLINNLYVLTAAHCVHQGLGIWV---------TIRGKSF------------------ 144
+ Y LTA HC W T G SF
Sbjct: 18 FNVRSGSTYYFLTAGHCTDGATTWWANSARTTVLGTTSGSSFPNNDYGIVRYTNTTIPKD 77
Query: 145 -SNKTGIVTGWG-------VQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCA 196
+ +T V ++G +T V + I N+
Sbjct: 78 GTVGGQDITSAANATVGMAVTRRGSTTGTHSGSVTALNATVNYGGGDVVYGMIRTNVCAE 137
Query: 197 GYPKGEKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
GDSGGPL+ +G+ S G G + V L
Sbjct: 138 P----------GDSGGPLYSGTR----AIGLTSGGSGNCSSGGTTFFQPVTEAL 177
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A
{Cellulomonas bogoriensis}
Length = 189
Score = 30.6 bits (69), Expect = 0.37
Identities = 32/152 (21%), Positives = 44/152 (28%), Gaps = 26/152 (17%)
Query: 121 YVLTAAHCVHQGLGIWV---TIRGKSFSNK-------TGIVTGWGVQKQGGSTSDTLLEV 170
+TA HC G T G SF V +
Sbjct: 26 GFITAGHCGRTGATTANPTGTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGH 85
Query: 171 EVPILSNAECKK-----------TAYENRIT-PNMLCAGYPKGEKDSCQGDSGGPLHYAN 218
+ +A C+ TA + +T P G + + GDSGG L N
Sbjct: 86 TAAPVGSAVCRSGSTTGWHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLAGN 145
Query: 219 ETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
+ GV S G G + + VN L
Sbjct: 146 Q----AQGVTSGGSGNCRTGGTTFFQPVNPIL 173
>1hpg_A Glutamic acid specific protease; serine protease,
hydrolase-hydrolase inhibitor complex; 1.50A
{Streptomyces griseus} SCOP: b.47.1.1
Length = 187
Score = 29.1 bits (65), Expect = 1.0
Identities = 28/159 (17%), Positives = 45/159 (28%), Gaps = 31/159 (19%)
Query: 119 NLYVLTAAHCVHQGLGIWV--------TIRGKSFSNK-------TGIVTGWGVQKQGGST 163
Y +TA HC + G SF T + G +
Sbjct: 25 ARYFVTAGHCTNISANWSASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGS 84
Query: 164 SDTLLEVEVPILSNAECKKTAY----ENRITPNMLCAGYPKGEKD--------SCQGDSG 211
+ + ++ A K + +T + Y G S GDSG
Sbjct: 85 TQDISSAANAVVGQAIKKSGSTTKVTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSG 144
Query: 212 GPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
G +A +G+ S GC+ ++ V L
Sbjct: 145 GAH-FAGSVA---LGIHSGSSGCSGTAGSAIHQPVTEAL 179
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces
griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E
5sga_E 2sfa_A
Length = 181
Score = 28.3 bits (63), Expect = 1.8
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 25/159 (15%)
Query: 113 GATLINNLYVLTAAHCVHQGLGIWV-TIRGKSF-SNKTGIV---TGWGVQKQGGSTSDTL 167
++ + LTA HC + + T G SF +N GI+ + + +
Sbjct: 19 NVSVNGVAHALTAGHCTNISASWSIGTRTGTSFPNNDYGIIRHSNPAAADGRVYLYNGSY 78
Query: 168 LEVE---VPILSNAECKK-----------TAYENRIT--PNMLCAGYPKGEKDSCQGDSG 211
++ + A + T + + + G + + GDSG
Sbjct: 79 QDITTAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSG 138
Query: 212 GPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
G L + +G+ S G G + Y V L
Sbjct: 139 GSLFAGS----TALGLTSGGSGNCRTGGTTFYQPVTEAL 173
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT
catalysis, protein folding, protein stability, packing
DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes}
SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A*
1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A*
2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A
1gbl_A ...
Length = 198
Score = 28.0 bits (62), Expect = 2.6
Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 27/145 (18%)
Query: 121 YVLTAAHCVHQGLGIWV------TIRGKSFSN------KTGIVTGWGVQKQGGSTSDTLL 168
+TA HC + T + F + GS+ T+
Sbjct: 30 GFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVR 89
Query: 169 EVEVPILSNAECK---KTAYE-NRITPNMLCAGYPKGEK------DSC--QGDSGGPLHY 216
+ A C+ T Y+ IT + A Y +G ++C +GDSGG
Sbjct: 90 GSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWIT 149
Query: 217 ANETVHHIVGVVSWGEGCAQENYPG 241
+ GV+S G + N G
Sbjct: 150 SAGQA---QGVMSGGNVQSNGNNCG 171
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability,
electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Length = 188
Score = 28.0 bits (62), Expect = 2.6
Identities = 24/158 (15%), Positives = 39/158 (24%), Gaps = 29/158 (18%)
Query: 118 NNLYVLTAAHCVHQGLGIWV-----TIRGKSFSNK--------TGIVTGWGVQKQGGSTS 164
+TA HC G + + F + V +
Sbjct: 26 GQPGFVTAGHCGSVGTQVSIGNGRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGY 85
Query: 165 DTLLEVEVPILSNAECKK-----------TAYENRITPNM-LCAGYPKGEKDSCQGDSGG 212
T+ + + C+ A ++ + + GDSGG
Sbjct: 86 ATVSGSSTAPIGSQVCRSGSTTGWYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGG 145
Query: 213 PLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
+ GV S G G + Y VN L
Sbjct: 146 SFISGTQ----AQGVTSGGSGNCRTGGTTFYQEVNPML 179
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.1 bits (62), Expect = 3.5
Identities = 28/229 (12%), Positives = 58/229 (25%), Gaps = 91/229 (39%)
Query: 35 PHGFQDYTSWFQELISGFVTNQEESTPPEPVKPVDLEKCGPCTCGAVNKKTRIVGGQVTY 94
G + W + +TP + L P +C
Sbjct: 210 TQGL-NILEWLEN---------PSNTPDKDY----LLSI-PISC---------------- 238
Query: 95 VHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQGLG--------IWVTIRGKSFSN 146
P + ++ L + YV+T G T +
Sbjct: 239 ----PLIGVI----------QLAH--YVVT---AKLLGFTPGELRSYLKGATGHSQ---- 275
Query: 147 KTGIVTGWGVQKQGGSTSDTLLEVEVPILSN-----AECKKTAYENRITPNMLCAGYPKG 201
G+VT + + ++ ++ C + + P++L
Sbjct: 276 --GLVTAVAIA--ETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSIL------- 324
Query: 202 EKDSCQGDSGGPLHYANETVHHIVGVVSWGEGCAQENYPGVYARVNRYL 250
+DS + + G P ++ + QE + N +L
Sbjct: 325 -EDSLENNEGVP--------SPMLSI----SNLTQEQVQDYVNKTNSHL 360
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A
{Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Length = 359
Score = 27.8 bits (61), Expect = 3.7
Identities = 19/130 (14%), Positives = 33/130 (25%), Gaps = 13/130 (10%)
Query: 89 GGQVTYVHQYPWMALL--MYKKRFYCGATLINNLYVLTAAHCVHQGLGIWVTIRGKSFSN 146
VT Y K + +NN + + H G G +V G F N
Sbjct: 220 ADLVTMKGNY-IYHTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQN 278
Query: 147 KTGIVTGWGVQKQGGSTSDTLLEVEVPILSNAECKKTAYENRITPNMLCAGYPKGEKDSC 206
++ + + +S C + + +G + S
Sbjct: 279 VDTVLETYEGEAFTVPSSTA----------GEVCSTYLGRDCVINGFGSSGTFSEDSTSF 328
Query: 207 QGDSGGPLHY 216
D G
Sbjct: 329 LSDFEGKNIA 338
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.136 0.436
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,146,907
Number of extensions: 238965
Number of successful extensions: 1072
Number of sequences better than 10.0: 1
Number of HSP's gapped: 732
Number of HSP's successfully gapped: 209
Length of query: 260
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 168
Effective length of database: 4,133,061
Effective search space: 694354248
Effective search space used: 694354248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.2 bits)