Query psy8663
Match_columns 161
No_of_seqs 192 out of 1146
Neff 6.2
Searched_HMMs 29240
Date Sat Aug 17 00:35:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pka_A Kallikrein A; serine pr 99.7 1.4E-16 4.7E-21 108.1 6.6 44 117-160 1-44 (80)
2 2vnt_A Urokinase-type plasmino 99.6 1.2E-16 4.2E-21 129.0 6.4 56 105-160 10-72 (276)
3 2olg_A Pro-phenoloxidase activ 99.6 2.7E-15 9.3E-20 121.9 6.0 56 105-160 11-71 (278)
4 1yph_C Chymotrypsin A, chain B 99.6 4.5E-15 1.5E-19 108.9 6.2 44 117-160 1-45 (131)
5 4f4o_C Haptoglobin; globin fol 99.5 9.6E-16 3.3E-20 130.3 1.3 59 101-160 84-146 (347)
6 1ddj_A Plasminogen; catalytic 99.5 1.5E-14 5.2E-19 115.8 6.9 47 114-160 15-62 (247)
7 1yc0_A Hepatocyte growth facto 99.5 2.6E-14 9E-19 116.7 7.0 53 107-160 21-78 (283)
8 1t8o_A Chymotrypsin A; chymotr 99.5 3.2E-14 1.1E-18 114.0 7.3 47 114-160 13-60 (245)
9 2jde_A Urokinase-type plasmino 99.5 1.8E-14 6E-19 116.7 5.6 54 107-160 12-72 (276)
10 2bdy_A Thrombin; thrombin, com 99.5 3.5E-14 1.2E-18 116.4 6.8 46 114-159 28-75 (289)
11 1z8g_A Serine protease hepsin; 99.5 3.3E-14 1.1E-18 121.2 6.4 56 102-159 104-160 (372)
12 1pyt_D TC, PCPA-TC, chymotryps 99.5 5.5E-14 1.9E-18 112.8 5.7 47 114-160 11-61 (251)
13 3nxp_A Prethrombin-1; alloster 99.4 7.3E-14 2.5E-18 121.1 6.0 46 114-159 163-210 (424)
14 2xxl_A GRAM-positive specific 99.4 1.1E-13 3.8E-18 119.9 6.1 53 107-160 110-166 (408)
15 2b9l_A Prophenoloxidase activa 99.4 1.4E-13 4.9E-18 118.8 5.2 56 105-160 115-182 (394)
16 1elv_A Complement C1S componen 99.4 1.3E-13 4.5E-18 115.2 4.7 56 101-160 64-123 (333)
17 1md8_A C1R complement serine p 99.4 2.8E-13 9.5E-18 113.7 5.2 56 102-160 72-131 (329)
18 1zjk_A Mannan-binding lectin s 99.4 3.6E-13 1.2E-17 115.1 4.5 57 101-160 145-203 (403)
19 1gpz_A Complement C1R componen 99.3 8.6E-13 3E-17 112.3 6.6 57 101-160 139-199 (399)
20 2f83_A Coagulation factor XI; 99.3 7.1E-13 2.4E-17 120.3 5.8 53 107-160 379-434 (625)
21 4dur_A Plasminogen, serine pro 99.3 1.7E-12 5.9E-17 121.1 6.9 54 107-160 547-606 (791)
22 3f1s_B Vitamin K-dependent pro 99.3 1.1E-12 3.8E-17 107.5 4.7 50 106-160 47-97 (283)
23 2xrc_A Human complement factor 99.3 3.1E-13 1E-17 121.4 1.5 54 107-160 308-365 (565)
24 2odp_A Complement C2; C3/C5 co 99.3 7.4E-13 2.5E-17 115.5 2.2 50 106-160 218-267 (509)
25 3h5c_B Vitamin K-dependent pro 99.2 9.5E-12 3.3E-16 103.0 4.4 41 120-160 97-138 (317)
26 1rrk_A Complement factor B; BB 99.1 1.8E-11 6.3E-16 106.1 3.3 49 107-160 210-262 (497)
27 3hrz_D Complement factor B; se 99.0 2.1E-10 7E-15 104.0 5.4 51 105-160 450-504 (741)
28 1agj_A Epidermolytic toxin A; 98.6 1.2E-08 4.1E-13 81.2 2.2 38 123-160 36-75 (242)
29 1qtf_A Exfoliative toxin B; se 98.5 2.6E-08 8.9E-13 79.9 2.3 38 123-160 29-68 (246)
30 1arb_A Achromobacter protease 98.3 6.9E-07 2.4E-11 73.5 4.9 29 132-160 26-60 (268)
31 1wcz_A Glutamyl endopeptidase; 97.9 3.3E-06 1.1E-10 68.7 1.8 23 138-160 32-54 (268)
32 2o8l_A V8 protease, taphylococ 97.8 5.4E-06 1.9E-10 67.6 1.7 23 138-160 32-54 (274)
33 3k6y_A Serine protease, possib 96.7 0.0013 4.6E-08 51.8 4.1 33 128-160 41-78 (237)
34 1l1j_A Heat shock protease HTR 95.7 0.0043 1.5E-07 49.6 2.3 22 139-160 55-77 (239)
35 3tjo_A Serine protease HTRA1; 95.4 0.012 3.9E-07 46.6 3.7 21 140-160 63-84 (231)
36 1lcy_A HTRA2 serine protease; 94.8 0.012 4.1E-07 48.8 2.4 21 140-160 47-68 (325)
37 1te0_A Protease DEGS; two doma 94.8 0.0099 3.4E-07 49.0 1.8 22 139-160 41-63 (318)
38 3num_A Serine protease HTRA1; 93.2 0.065 2.2E-06 44.3 3.8 21 140-160 46-67 (332)
39 3lgi_A Protease DEGS; stress-s 93.0 0.044 1.5E-06 43.1 2.3 21 140-160 53-74 (237)
40 3qo6_A Protease DO-like 1, chl 91.9 0.071 2.4E-06 44.5 2.4 21 140-160 53-74 (348)
41 3sti_A Protease DEGQ; serine p 90.7 0.12 4.1E-06 41.4 2.4 21 140-160 63-85 (245)
42 3stj_A Protease DEGQ; serine p 85.3 0.4 1.4E-05 40.1 2.4 22 139-160 62-85 (345)
43 4a8c_A Periplasmic PH-dependen 74.8 1.4 4.9E-05 37.7 2.3 21 140-160 63-85 (436)
44 1ky9_A Protease DO, DEGP, HTRA 71.9 1.8 6.2E-05 37.4 2.3 22 140-161 86-109 (448)
45 3pv2_A DEGQ; trypsin fold, PDZ 66.9 2.8 9.5E-05 36.2 2.4 22 140-161 77-100 (451)
46 4fln_A Protease DO-like 2, chl 47.8 6.8 0.00023 34.9 1.6 34 126-161 62-95 (539)
No 1
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=99.66 E-value=1.4e-16 Score=108.13 Aligned_cols=44 Identities=39% Similarity=0.755 Sum_probs=41.8
Q ss_pred eeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 117 IVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 117 IvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
|+||..+..++|||+++|...+.++|||+||+++||||||||+.
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~ 44 (80)
T 2pka_A 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKN 44 (80)
T ss_dssp CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC
T ss_pred CCCCEECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCC
Confidence 68999999999999999998888999999999999999999985
No 2
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.65 E-value=1.2e-16 Score=128.98 Aligned_cols=56 Identities=29% Similarity=0.779 Sum_probs=45.3
Q ss_pred CCccCCCC--CCCceeCCEEcCCCCCCeEEEEEeCC-----eEeeEEEEeeCCeeeecccccC
Q psy8663 105 PCTCGAVN--KKTRIVGGQVTYVHQYPWMALLMYKK-----RFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 105 ~~~CG~~~--~~~rIvgG~~a~~ge~PW~vsL~~~~-----~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
...||.+. ...||+||..+..++|||+|+|.+.. .|+||||||+++||||||||+.
T Consensus 10 ~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~ 72 (276)
T 2vnt_A 10 KFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFI 72 (276)
T ss_dssp CCCTTCCCC-----CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTT
T ss_pred CCCCCCcCCCCCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECccccc
Confidence 34688654 35799999999999999999998732 4799999999999999999984
No 3
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.56 E-value=2.7e-15 Score=121.94 Aligned_cols=56 Identities=45% Similarity=0.931 Sum_probs=48.9
Q ss_pred CCccCCCCCCCceeCCEEcCCCCCCeEEEEEeCC-----eEeeEEEEeeCCeeeecccccC
Q psy8663 105 PCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKK-----RFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 105 ~~~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~~~-----~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+..||......||+||..+..++|||+|+|.+.. .++|||+||+++||||||||+.
T Consensus 11 ~~~CG~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~ 71 (278)
T 2olg_A 11 PNDCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVA 71 (278)
T ss_dssp CSSCSCCCCCCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTS
T ss_pred hhHhCCCCCCCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCC
Confidence 3478876667899999999999999999998732 6899999999999999999985
No 4
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=99.55 E-value=4.5e-15 Score=108.94 Aligned_cols=44 Identities=39% Similarity=0.706 Sum_probs=41.0
Q ss_pred eeCCEEcCCCCCCeEEEEEe-CCeEeeEEEEeeCCeeeecccccC
Q psy8663 117 IVGGQVTYVHQYPWMALLMY-KKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 117 IvgG~~a~~ge~PW~vsL~~-~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
|+||..+..++|||+++|.. .+.++|||+||+++||||||||+.
T Consensus 1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~ 45 (131)
T 1yph_C 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGV 45 (131)
T ss_dssp CBTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCC
T ss_pred CCCCEECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCC
Confidence 68999999999999999987 567899999999999999999985
No 5
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.53 E-value=9.6e-16 Score=130.27 Aligned_cols=59 Identities=32% Similarity=0.673 Sum_probs=49.2
Q ss_pred CCCCCCccCCCC----CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 101 EKCGPCTCGAVN----KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 101 ~~C~~~~CG~~~----~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..|.+ .||... ...||+||..|..++|||+|+|...+.++|||+||+++||||||||+.
T Consensus 84 p~C~p-~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~ 146 (347)
T 4f4o_C 84 PECEA-VCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLR 146 (347)
T ss_dssp CEEEE-CCSCCSSCC-----CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHT
T ss_pred CCccC-CCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCccccc
Confidence 35654 688653 357999999999999999999999888999999999999999999984
No 6
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.52 E-value=1.5e-14 Score=115.80 Aligned_cols=47 Identities=45% Similarity=0.847 Sum_probs=43.2
Q ss_pred CCceeCCEEcCCCCCCeEEEEEeC-CeEeeEEEEeeCCeeeecccccC
Q psy8663 114 KTRIVGGQVTYVHQYPWMALLMYK-KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 114 ~~rIvgG~~a~~ge~PW~vsL~~~-~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..||+||..+..++|||+|+|... +.++|||+||+++||||||||+.
T Consensus 15 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~ 62 (247)
T 1ddj_A 15 PGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 62 (247)
T ss_dssp CTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGT
T ss_pred CCCcCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcC
Confidence 359999999999999999999873 67899999999999999999985
No 7
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.50 E-value=2.6e-14 Score=116.70 Aligned_cols=53 Identities=32% Similarity=0.797 Sum_probs=44.3
Q ss_pred ccCCCCC-----CCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVNK-----KTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~~-----~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||.+.. ..||+||..+..++|||+++|... .++|||+||+++||||||||+.
T Consensus 21 ~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~ 78 (283)
T 1yc0_A 21 ACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFS 78 (283)
T ss_dssp CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGT
T ss_pred CcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-CcEEEEEEeeCCEEEECHHHcC
Confidence 4665542 259999999999999999999876 6899999999999999999985
No 8
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.50 E-value=3.2e-14 Score=113.98 Aligned_cols=47 Identities=38% Similarity=0.690 Sum_probs=41.3
Q ss_pred CCceeCCEEcCCCCCCeEEEEEe-CCeEeeEEEEeeCCeeeecccccC
Q psy8663 114 KTRIVGGQVTYVHQYPWMALLMY-KKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 114 ~~rIvgG~~a~~ge~PW~vsL~~-~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..||+||..+..++|||+++|.. .+.++|||+||+++||||||||+.
T Consensus 13 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~ 60 (245)
T 1t8o_A 13 LSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGV 60 (245)
T ss_dssp ---CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCC
T ss_pred CCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCc
Confidence 35999999999999999999987 467899999999999999999985
No 9
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.49 E-value=1.8e-14 Score=116.66 Aligned_cols=54 Identities=30% Similarity=0.806 Sum_probs=40.3
Q ss_pred ccCCCC--CCCceeCCEEcCCCCCCeEEEEEeC---C--eEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVN--KKTRIVGGQVTYVHQYPWMALLMYK---K--RFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~--~~~rIvgG~~a~~ge~PW~vsL~~~---~--~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||... ...||+||..+..++|||+|+|... + .++|||+||+++||||||||+.
T Consensus 12 ~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~ 72 (276)
T 2jde_A 12 QCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFI 72 (276)
T ss_dssp ------------CBSSEECCGGGSTTEEEEEEECCCCCEEEEEEEEEEETTEEEECGGGTT
T ss_pred CCCCCCCCCCCCeECCEECCCCCCCeEEEEEEecCCCccceeeeeEEeeCCEEEEcHHhcc
Confidence 577643 4579999999999999999999763 2 5789999999999999999984
No 10
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.48 E-value=3.5e-14 Score=116.41 Aligned_cols=46 Identities=43% Similarity=0.832 Sum_probs=40.5
Q ss_pred CCceeCCEEcCCCCCCeEEEEEeC--CeEeeEEEEeeCCeeeeccccc
Q psy8663 114 KTRIVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAAHCV 159 (161)
Q Consensus 114 ~~rIvgG~~a~~ge~PW~vsL~~~--~~~~CGGsLIs~~~VLTAAHC~ 159 (161)
..||+||..+..++|||+|+|... +.++|||+||+++||||||||+
T Consensus 28 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~ 75 (289)
T 2bdy_A 28 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCL 75 (289)
T ss_dssp ---CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGT
T ss_pred CCeEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhc
Confidence 469999999999999999999764 5789999999999999999998
No 11
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.48 E-value=3.3e-14 Score=121.22 Aligned_cols=56 Identities=41% Similarity=0.839 Sum_probs=47.7
Q ss_pred CCCCCccCCCC-CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeeccccc
Q psy8663 102 KCGPCTCGAVN-KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCV 159 (161)
Q Consensus 102 ~C~~~~CG~~~-~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~ 159 (161)
.|. .||.+. ...||+||..+..++|||+|+|.+.+.++|||+||+++||||||||+
T Consensus 104 ~c~--~Cg~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv 160 (372)
T 1z8g_A 104 ICQ--DCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCF 160 (372)
T ss_dssp EEC--CCSCCCCC---CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGC
T ss_pred ecc--ccCCcCCCCCceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhc
Confidence 454 578653 45799999999999999999999988999999999999999999998
No 12
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.45 E-value=5.5e-14 Score=112.77 Aligned_cols=47 Identities=47% Similarity=0.827 Sum_probs=42.3
Q ss_pred CCceeCCEEcCCCCCCeEEEEEeC----CeEeeEEEEeeCCeeeecccccC
Q psy8663 114 KTRIVGGQVTYVHQYPWMALLMYK----KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 114 ~~rIvgG~~a~~ge~PW~vsL~~~----~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..||+||..+..++|||+++|.+. ..++|||+||+++||||||||+.
T Consensus 11 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~ 61 (251)
T 1pyt_D 11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCIS 61 (251)
T ss_dssp SSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCC
T ss_pred CCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhC
Confidence 469999999999999999999752 35799999999999999999985
No 13
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.44 E-value=7.3e-14 Score=121.07 Aligned_cols=46 Identities=43% Similarity=0.832 Sum_probs=42.8
Q ss_pred CCceeCCEEcCCCCCCeEEEEEeC--CeEeeEEEEeeCCeeeeccccc
Q psy8663 114 KTRIVGGQVTYVHQYPWMALLMYK--KRFYCGATLINNLYVLTAAHCV 159 (161)
Q Consensus 114 ~~rIvgG~~a~~ge~PW~vsL~~~--~~~~CGGsLIs~~~VLTAAHC~ 159 (161)
..||+||..+..++|||+|+|+.. +.++|||+||+++|||||||||
T Consensus 163 ~~RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv 210 (424)
T 3nxp_A 163 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCL 210 (424)
T ss_dssp SSCCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHH
T ss_pred CCeeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhc
Confidence 469999999999999999999874 5789999999999999999998
No 14
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.43 E-value=1.1e-13 Score=119.90 Aligned_cols=53 Identities=47% Similarity=0.932 Sum_probs=46.7
Q ss_pred ccCCCCCCCceeCCEEcCCCCCCeEEEEEeC--C--eEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVNKKTRIVGGQVTYVHQYPWMALLMYK--K--RFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~~--~--~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.|| .....||+||..+..++|||+|+|.+. + .++|||+||+++||||||||+.
T Consensus 110 ~CG-~~~~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~ 166 (408)
T 2xxl_A 110 DCG-NFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVH 166 (408)
T ss_dssp CCS-CCCCCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTT
T ss_pred ccC-CCCCCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcC
Confidence 577 445689999999999999999999872 2 6899999999999999999985
No 15
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.40 E-value=1.4e-13 Score=118.76 Aligned_cols=56 Identities=36% Similarity=0.754 Sum_probs=47.1
Q ss_pred CCccCCCCC---CCceeCC-EEcCCCCCCeEEEEEeC--------CeEeeEEEEeeCCeeeecccccC
Q psy8663 105 PCTCGAVNK---KTRIVGG-QVTYVHQYPWMALLMYK--------KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 105 ~~~CG~~~~---~~rIvgG-~~a~~ge~PW~vsL~~~--------~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+..||.+.. ..||+|| ..+..++|||+|+|.+. ..++|||+||+++||||||||+.
T Consensus 115 ~~~CG~~~~~~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~ 182 (394)
T 2b9l_A 115 PSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVN 182 (394)
T ss_dssp CCCTTBCCTTCSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHG
T ss_pred CCCCCCCCCCCCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceec
Confidence 346886542 3599999 89999999999999874 25899999999999999999984
No 16
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.40 E-value=1.3e-13 Score=115.24 Aligned_cols=56 Identities=41% Similarity=0.830 Sum_probs=44.6
Q ss_pred CCCCCCccCCCC----CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 101 EKCGPCTCGAVN----KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 101 ~~C~~~~CG~~~----~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..|.+ .||... ...||+||..+..++|||+|+|.. ++|||+||+++||||||||+.
T Consensus 64 ~~c~~-~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~---~~CgGsLIs~~~VLTAAHC~~ 123 (333)
T 1elv_A 64 PKCVP-VCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN---PWAGGALINEYWVLTAAHVVE 123 (333)
T ss_dssp CCEEE-CCSCCSSCC-----CBTCEECCGGGSTTEEEEET---TEEEEEEEETTEEEECHHHHT
T ss_pred ccccC-CcCCCCCcccccceeecCcccCCCCcCeEEEecC---CceeEEEecCCEEEehhheeC
Confidence 45654 688754 246999999999999999999942 379999999999999999985
No 17
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.38 E-value=2.8e-13 Score=113.74 Aligned_cols=56 Identities=32% Similarity=0.682 Sum_probs=45.2
Q ss_pred CCCCCccCCCC----CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 102 KCGPCTCGAVN----KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 102 ~C~~~~CG~~~----~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.|.+ .||... ...||+||..+..++|||+|++... +.|||+||+++||||||||+.
T Consensus 72 ~c~~-~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHCv~ 131 (329)
T 1md8_A 72 RCLP-VCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLY 131 (329)
T ss_dssp CEEE-CCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEESS--SEEEEEEETTTEEEECGGGTS
T ss_pred CCCC-CCCCCCCcccccccccCCEECCCCCCCCeEeeccC--CCcceEEecCCEEEecCCEEE
Confidence 4543 588643 3579999999999999999999753 469999999999999999985
No 18
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.35 E-value=3.6e-13 Score=115.07 Aligned_cols=57 Identities=33% Similarity=0.609 Sum_probs=48.3
Q ss_pred CCCCCCccCCCC--CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 101 EKCGPCTCGAVN--KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 101 ~~C~~~~CG~~~--~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..|.+ .||... ...||+||..+..++|||+|+|.. .++|||+||+++||||||||+.
T Consensus 145 p~C~~-~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~--~~~CgGsLIs~~~VLTAAHC~~ 203 (403)
T 1zjk_A 145 PVCEP-VCGLSARTTGGQIYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVY 203 (403)
T ss_dssp CEEEE-CCCCCSSCCSCCCSSCEECCTTSSTTEEEEEE--SCCEEEEEETTTEEEECHHHHG
T ss_pred CCCCC-CCCCCCCCCCccccCCcCCCCCCcCCEeEecc--CCceEEEEecCCEEEEcHHhCC
Confidence 34543 688654 247999999999999999999987 4689999999999999999984
No 19
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.35 E-value=8.6e-13 Score=112.30 Aligned_cols=57 Identities=30% Similarity=0.649 Sum_probs=47.1
Q ss_pred CCCCCCccCCCC----CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 101 EKCGPCTCGAVN----KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 101 ~~C~~~~CG~~~----~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..|.+ .||... ...||+||..+..++|||+|++... +.|||+||+++||||||||+.
T Consensus 139 p~C~~-~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHC~~ 199 (399)
T 1gpz_A 139 PRCLP-VCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLY 199 (399)
T ss_dssp CEEEE-CCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECGGGTS
T ss_pred CCccC-CCCCcCCcccCCCEEECCEECCCCCCCCEEEECCC--CCeEEEEeCCCEEEeChhccc
Confidence 34543 588653 2579999999999999999998654 369999999999999999985
No 20
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.34 E-value=7.1e-13 Score=120.29 Aligned_cols=53 Identities=40% Similarity=0.809 Sum_probs=47.4
Q ss_pred ccCCCCCCCceeCCEEcCCCCCCeEEEEEeC---CeEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVNKKTRIVGGQVTYVHQYPWMALLMYK---KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~~---~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||.. ...||+||..+..++|||+|+|... +.++|||+||+++||||||||+.
T Consensus 379 ~Cg~~-~~~rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~ 434 (625)
T 2f83_A 379 ECTTK-IKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFY 434 (625)
T ss_dssp SSCSC-CCSCCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGS
T ss_pred ccCCC-CCCceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCC
Confidence 57754 4689999999999999999999875 57899999999999999999985
No 21
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.31 E-value=1.7e-12 Score=121.08 Aligned_cols=54 Identities=43% Similarity=0.829 Sum_probs=47.4
Q ss_pred ccCCCCC-----CCceeCCEEcCCCCCCeEEEEEeC-CeEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVNK-----KTRIVGGQVTYVHQYPWMALLMYK-KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~~-----~~rIvgG~~a~~ge~PW~vsL~~~-~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||.... ..||+||..+..++|||+|+|... +.++|||+||+++|||||||||.
T Consensus 547 ~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~ 606 (791)
T 4dur_A 547 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 606 (791)
T ss_dssp CTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGS
T ss_pred CcCCcccccccCCCceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcC
Confidence 5775532 369999999999999999999874 67899999999999999999985
No 22
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.31 E-value=1.1e-12 Score=107.46 Aligned_cols=50 Identities=28% Similarity=0.737 Sum_probs=36.3
Q ss_pred CccCCCCCCCceeCCEEcCCCCCCeEEEEEe-CCeEeeEEEEeeCCeeeecccccC
Q psy8663 106 CTCGAVNKKTRIVGGQVTYVHQYPWMALLMY-KKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 106 ~~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~-~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+.||..... |..+..++|||+|+|.. .+.++|||+||+++||||||||+.
T Consensus 47 c~CG~~~~~-----g~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~ 97 (283)
T 3f1s_B 47 CACGVLTSE-----KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSL 97 (283)
T ss_dssp TCTTCCCC-------------CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHT
T ss_pred cccCccccC-----CccccccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcC
Confidence 368865432 88899999999999987 567899999999999999999984
No 23
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.31 E-value=3.1e-13 Score=121.40 Aligned_cols=54 Identities=35% Similarity=0.791 Sum_probs=35.0
Q ss_pred ccCCCC----CCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVN----KKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~----~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||... ...||+||..+..++|||+|+|...+.++|||+||+++||||||||+.
T Consensus 308 ~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~ 365 (565)
T 2xrc_A 308 SCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLR 365 (565)
T ss_dssp CCCC--------------------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHT
T ss_pred ccCCCCCcccCCCceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcc
Confidence 577654 347999999999999999999998878899999999999999999985
No 24
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.28 E-value=7.4e-13 Score=115.52 Aligned_cols=50 Identities=30% Similarity=0.575 Sum_probs=39.6
Q ss_pred CccCCCCCCCceeCCEEcCCCCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 106 CTCGAVNKKTRIVGGQVTYVHQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 106 ~~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
..||.. .++|..+..++|||+|+|...+.++|||+||+++||||||||+.
T Consensus 218 ~~CG~~-----~~~g~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~ 267 (509)
T 2odp_A 218 TICGVG-----NMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFR 267 (509)
T ss_dssp CCSSCC-----CCCTTSCHHHHCTTEEEEEC----CEEEEECSSSEEEECGGGC-
T ss_pred cccCCc-----CCCCCccccCCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcC
Confidence 367743 35788888999999999988778899999999999999999985
No 25
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.19 E-value=9.5e-12 Score=102.96 Aligned_cols=41 Identities=27% Similarity=0.624 Sum_probs=37.8
Q ss_pred CEEcCCCCCCeEEEEEe-CCeEeeEEEEeeCCeeeecccccC
Q psy8663 120 GQVTYVHQYPWMALLMY-KKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 120 G~~a~~ge~PW~vsL~~-~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
|..+..++|||+|+|.. .+.++|||+||+++||||||||+.
T Consensus 97 G~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~ 138 (317)
T 3h5c_B 97 KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSL 138 (317)
T ss_dssp CSSCCTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHH
T ss_pred cccCccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcC
Confidence 78899999999999987 577899999999999999999973
No 26
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.12 E-value=1.8e-11 Score=106.06 Aligned_cols=49 Identities=35% Similarity=0.602 Sum_probs=38.9
Q ss_pred ccCCCCCCCceeCCEEcCCCCCCeEEEEEe----CCeEeeEEEEeeCCeeeecccccC
Q psy8663 107 TCGAVNKKTRIVGGQVTYVHQYPWMALLMY----KKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 107 ~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~----~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.||.... .+..+..++|||+|+|.+ .+.++|||+||+++||||||||+.
T Consensus 210 ~CG~~~~-----~~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~ 262 (497)
T 1rrk_A 210 LCGMVWE-----HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFT 262 (497)
T ss_dssp CTTCCCC-----CTTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCC
T ss_pred CCCCCCC-----CCCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCC
Confidence 5775432 134566789999999986 356899999999999999999985
No 27
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.01 E-value=2.1e-10 Score=103.99 Aligned_cols=51 Identities=31% Similarity=0.522 Sum_probs=36.2
Q ss_pred CCccCCCCCCCceeCCEEcCCCCCCeEEEEEeC----CeEeeEEEEeeCCeeeecccccC
Q psy8663 105 PCTCGAVNKKTRIVGGQVTYVHQYPWMALLMYK----KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 105 ~~~CG~~~~~~rIvgG~~a~~ge~PW~vsL~~~----~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
...||.. ...|..+..++|||++.+... +.++|||+||+++||||||||+.
T Consensus 450 ~~~CG~~-----~~~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~ 504 (741)
T 3hrz_D 450 LSLCGMV-----WEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFT 504 (741)
T ss_dssp TTSTTCC-----CCC---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC
T ss_pred ccccccc-----cccCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhcc
Confidence 3356643 345788899999999888773 56899999999999999999985
No 28
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=98.60 E-value=1.2e-08 Score=81.19 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=31.6
Q ss_pred cCCCCCCeEEEE--EeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 123 TYVHQYPWMALL--MYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 123 a~~ge~PW~vsL--~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+..++|||++.+ ...+.++|+|+||+++||||||||+.
T Consensus 36 a~~~~~p~~~~v~i~~~~~~~c~G~lI~~~~VLTAaHcv~ 75 (242)
T 1agj_A 36 KDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAK 75 (242)
T ss_dssp TGGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHG
T ss_pred ccccccccceEEEEEECCCccEEEEEEeCCEEEEChhhcc
Confidence 556789998544 44567899999999999999999984
No 29
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=98.53 E-value=2.6e-08 Score=79.87 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=31.4
Q ss_pred cCCCCCCeEEEE--EeCCeEeeEEEEeeCCeeeecccccC
Q psy8663 123 TYVHQYPWMALL--MYKKRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 123 a~~ge~PW~vsL--~~~~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+..++|||++.+ ...+.++|+|+||+++||||||||+.
T Consensus 29 ~~~~~~P~~~~~~i~~~~~~~c~G~lI~~~~VLTAaHcv~ 68 (246)
T 1qtf_A 29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAR 68 (246)
T ss_dssp SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHG
T ss_pred hhcCcCchhcEEEEEECCCceEEEEEEECCEEEECHHhCC
Confidence 445689999653 34667899999999999999999984
No 30
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=98.27 E-value=6.9e-07 Score=73.46 Aligned_cols=29 Identities=34% Similarity=0.612 Sum_probs=24.8
Q ss_pred EEEEeCCeEeeEEEEeeC------CeeeecccccC
Q psy8663 132 ALLMYKKRFYCGATLINN------LYVLTAAHCVH 160 (161)
Q Consensus 132 vsL~~~~~~~CGGsLIs~------~~VLTAAHC~~ 160 (161)
+.|...+.|+|||+||++ +||||||||+.
T Consensus 26 ~rl~~~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~ 60 (268)
T 1arb_A 26 GAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGM 60 (268)
T ss_dssp EEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSC
T ss_pred EEEEeCCccEEeEEEEcCCCCCCCCEEEEcHHhCC
Confidence 455567889999999998 59999999984
No 31
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=97.89 E-value=3.3e-06 Score=68.67 Aligned_cols=23 Identities=22% Similarity=0.349 Sum_probs=21.0
Q ss_pred CeEeeEEEEeeCCeeeecccccC
Q psy8663 138 KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 138 ~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+.++|+|+||+++||||||||+.
T Consensus 32 g~~~CgG~lI~~~~VLTAAHCv~ 54 (268)
T 1wcz_A 32 GTFIASGVVVGKDTLLTNKHVVD 54 (268)
T ss_dssp CEEEEEEEECSSSEEEECHHHHG
T ss_pred CCEEEEEEEEECCEEEEChhhCC
Confidence 45789999999999999999984
No 32
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=97.80 E-value=5.4e-06 Score=67.58 Aligned_cols=23 Identities=22% Similarity=0.349 Sum_probs=20.8
Q ss_pred CeEeeEEEEeeCCeeeecccccC
Q psy8663 138 KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 138 ~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
+.++|+|+||+++||||||||+.
T Consensus 32 ~~~~C~G~lI~~~~VLTAAHCv~ 54 (274)
T 2o8l_A 32 GTFIASGVVVGKDTLLTNKHVVD 54 (274)
T ss_dssp EEEEEEEEEEETTEEEECHHHHH
T ss_pred CCEEEEEEEEECCEEEEChhhCc
Confidence 35789999999999999999984
No 33
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=96.69 E-value=0.0013 Score=51.80 Aligned_cols=33 Identities=24% Similarity=0.137 Sum_probs=25.4
Q ss_pred CCeEEEEEeC-----CeEeeEEEEeeCCeeeecccccC
Q psy8663 128 YPWMALLMYK-----KRFYCGATLINNLYVLTAAHCVH 160 (161)
Q Consensus 128 ~PW~vsL~~~-----~~~~CGGsLIs~~~VLTAAHC~~ 160 (161)
.|..|.+... ....|.|+||+++||||+|||+.
T Consensus 41 ~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~ 78 (237)
T 3k6y_A 41 EPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVA 78 (237)
T ss_dssp GGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTT
T ss_pred cCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcC
Confidence 4556666542 24579999999999999999985
No 34
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=95.71 E-value=0.0043 Score=49.60 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=19.5
Q ss_pred eEeeEEEEeeCC-eeeecccccC
Q psy8663 139 RFYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 139 ~~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
.+.|+|.||+++ ||||+|||+.
T Consensus 55 ~~~gsG~iI~~~g~ILTnaHvv~ 77 (239)
T 1l1j_A 55 ASLGSGFIFDPEGYILTNYHVVG 77 (239)
T ss_dssp EEEEEEEEEETTTEEEEEHHHHS
T ss_pred CceEEEEEEeCCCEEEEChHHhC
Confidence 467999999985 9999999985
No 35
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=95.39 E-value=0.012 Score=46.58 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.9
Q ss_pred EeeEEEEeeCC-eeeecccccC
Q psy8663 140 FYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
..+.|++|+++ ||||+|||+.
T Consensus 63 ~~GSG~iI~~~G~VLTaaHvv~ 84 (231)
T 3tjo_A 63 ASGSGFIVSEDGLIVTNAHVVT 84 (231)
T ss_dssp EEEEEEECSTTCEEEEETTTCC
T ss_pred ceEEEEEEeCCCEEEEchhccc
Confidence 46889999998 9999999985
No 36
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=94.82 E-value=0.012 Score=48.75 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=19.3
Q ss_pred EeeEEEEeeCC-eeeecccccC
Q psy8663 140 FYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
..|+|++|+++ ||||++||+.
T Consensus 47 ~~gsG~iI~~~G~IlT~aHvv~ 68 (325)
T 1lcy_A 47 SNGSGFVVAADGLIVTNAHVVA 68 (325)
T ss_dssp EEEEEEEEETTTEEEECHHHHT
T ss_pred ccEEEEEEeCCCEEEECHHHcC
Confidence 57999999998 9999999985
No 37
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=94.81 E-value=0.0099 Score=49.01 Aligned_cols=22 Identities=18% Similarity=0.504 Sum_probs=19.7
Q ss_pred eEeeEEEEeeCC-eeeecccccC
Q psy8663 139 RFYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 139 ~~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
.+.|+|.+|+++ ||||++||+.
T Consensus 41 ~~~gsG~iI~~~G~IlT~aHvv~ 63 (318)
T 1te0_A 41 RTLGSGVIMDQRGYIITNKHVIN 63 (318)
T ss_dssp EEEEEEEECSTTCEEEEEHHHHT
T ss_pred CccEEEEEEeCCCEEEECHHHcC
Confidence 467999999987 9999999985
No 38
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=93.24 E-value=0.065 Score=44.31 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.7
Q ss_pred EeeEEEEeeCC-eeeecccccC
Q psy8663 140 FYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
..+.|++|+++ ||||+|||+.
T Consensus 46 ~~GSG~iI~~~G~ILTaaHvv~ 67 (332)
T 3num_A 46 ASGSGFIVSEDGLIVTNAHVVT 67 (332)
T ss_dssp EEEEEEEEETTTEEEECTTTCC
T ss_pred eeEEEEEEeCCCEEEEChHHcC
Confidence 45889999998 9999999985
No 39
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=93.00 E-value=0.044 Score=43.15 Aligned_cols=21 Identities=14% Similarity=0.453 Sum_probs=18.7
Q ss_pred EeeEEEEeeCC-eeeecccccC
Q psy8663 140 FYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
..+.|.+|+++ ||||+|||+.
T Consensus 53 ~~GsG~ii~~~G~IlTaaHvv~ 74 (237)
T 3lgi_A 53 TLGSGVIMDQRGYIITNKHVIN 74 (237)
T ss_dssp EEEEEEEEETTTEEEEEHHHHT
T ss_pred eEEEEEEEeCCCEEEEeeeecC
Confidence 36889999998 9999999985
No 40
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=91.95 E-value=0.071 Score=44.47 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=18.8
Q ss_pred EeeEEEEeeCC-eeeecccccC
Q psy8663 140 FYCGATLINNL-YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~-~VLTAAHC~~ 160 (161)
..+.|++|+++ ||||+|||+.
T Consensus 53 g~GSG~iI~~~G~IlT~aHvv~ 74 (348)
T 3qo6_A 53 GSGSGFVWDKQGHIVTNYHVIR 74 (348)
T ss_dssp EEEEEEEEETTTEEEECHHHHT
T ss_pred ceEEEEEEeCCCEEEECHHHhC
Confidence 46899999998 9999999985
No 41
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=90.67 E-value=0.12 Score=41.35 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=17.6
Q ss_pred EeeEEEEeeCC--eeeecccccC
Q psy8663 140 FYCGATLINNL--YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~--~VLTAAHC~~ 160 (161)
..+.|.+|+++ ||||++||+.
T Consensus 63 ~~GSGfiI~~~~G~IlTnaHvv~ 85 (245)
T 3sti_A 63 GLGSGVIINASKGYVLTNNHVIN 85 (245)
T ss_dssp -CCEEEEEETTTTEEEECGGGC-
T ss_pred ceEEEEEEeCCCCEEEEcHHHhC
Confidence 35889999997 9999999985
No 42
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=85.35 E-value=0.4 Score=40.05 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=19.2
Q ss_pred eEeeEEEEeeCC--eeeecccccC
Q psy8663 139 RFYCGATLINNL--YVLTAAHCVH 160 (161)
Q Consensus 139 ~~~CGGsLIs~~--~VLTAAHC~~ 160 (161)
...+.|.+|+++ ||||++||+.
T Consensus 62 ~~~GSGfiI~~~~G~IlTnaHVv~ 85 (345)
T 3stj_A 62 EGLGSGVIINASKGYVLTNNHVIN 85 (345)
T ss_dssp EEEEEEEEEETTTTEEEECHHHHT
T ss_pred ceeEEEEEEECCCCEEEEChHHhC
Confidence 346899999987 9999999985
No 43
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=74.78 E-value=1.4 Score=37.73 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.7
Q ss_pred EeeEEEEeeCC--eeeecccccC
Q psy8663 140 FYCGATLINNL--YVLTAAHCVH 160 (161)
Q Consensus 140 ~~CGGsLIs~~--~VLTAAHC~~ 160 (161)
..+.|.+|++. ||||++||+.
T Consensus 63 ~~GSGfii~~~~G~IlTn~Hvv~ 85 (436)
T 4a8c_A 63 GLGSGVIINASKGYVLTNNHVIN 85 (436)
T ss_pred eEEEEEEEECCCCEEEECHHHhC
Confidence 46899999986 9999999985
No 44
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=71.94 E-value=1.8 Score=37.35 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.9
Q ss_pred EeeEEEEeeCC--eeeecccccCC
Q psy8663 140 FYCGATLINNL--YVLTAAHCVHQ 161 (161)
Q Consensus 140 ~~CGGsLIs~~--~VLTAAHC~~~ 161 (161)
..|.|.+|+.. ||||++||+.+
T Consensus 86 ~~GSG~ii~~~~g~IlTn~HVv~~ 109 (448)
T 1ky9_A 86 ALGSGVIIDADKGYVVTNNHVVDN 109 (448)
T ss_dssp EEEEEEEEETTTTEEEEEHHHHTT
T ss_pred cEEEEEEEECCCCEEEEChHHhCC
Confidence 57999999974 99999999853
No 45
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=66.89 E-value=2.8 Score=36.20 Aligned_cols=22 Identities=14% Similarity=0.247 Sum_probs=18.4
Q ss_pred EeeEEEEeeC--CeeeecccccCC
Q psy8663 140 FYCGATLINN--LYVLTAAHCVHQ 161 (161)
Q Consensus 140 ~~CGGsLIs~--~~VLTAAHC~~~ 161 (161)
..+.|.+|++ .||||++||+.+
T Consensus 77 ~~GSGfiI~~~~G~IlTn~HVv~~ 100 (451)
T 3pv2_A 77 SIGSGVIIDPNNGVIITNDHVIRN 100 (451)
T ss_dssp EEEEEEEEETTTTEEEECHHHHTT
T ss_pred eeEEEEEEECCCCEEEEChHHhCC
Confidence 4688999996 599999999853
No 46
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=47.82 E-value=6.8 Score=34.92 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=24.0
Q ss_pred CCCCeEEEEEeCCeEeeEEEEeeCCeeeecccccCC
Q psy8663 126 HQYPWMALLMYKKRFYCGATLINNLYVLTAAHCVHQ 161 (161)
Q Consensus 126 ge~PW~vsL~~~~~~~CGGsLIs~~~VLTAAHC~~~ 161 (161)
...||+.... ......|.+|++.+|||.+|.+.+
T Consensus 62 ~~~Pw~~~~~--~~s~GSGfiI~dG~IlTN~HVV~~ 95 (539)
T 4fln_A 62 YSLPWQKQRQ--FTSTGSAFMIGDGKLLTNAHCVEH 95 (539)
T ss_dssp SSSTTSBCCC--EEEEEEEEEEETTEEEECGGGGTT
T ss_pred CCCccccCCc--cceEEEEEEEECCEEEEChHHcCC
Confidence 3568864322 223467889999999999998853
Done!