Query psy8666
Match_columns 124
No_of_seqs 118 out of 1719
Neff 11.1
Searched_HMMs 29240
Date Sat Aug 17 00:39:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.7 9.5E-17 3.2E-21 88.6 11.0 84 2-92 24-107 (107)
2 3knb_A Titin; IG-like, titin, 99.7 7E-16 2.4E-20 84.1 10.1 83 2-89 16-98 (100)
3 2cqv_A MLCK, myosin light chai 99.6 6.1E-15 2.1E-19 81.9 9.6 86 2-94 18-103 (114)
4 2e7c_A Myosin-binding protein 99.6 1.1E-14 3.8E-19 81.3 9.9 83 2-92 35-117 (118)
5 3qp3_A Titin; I-SET IG-like, s 99.6 3.6E-14 1.2E-18 77.3 11.5 83 2-91 19-101 (103)
6 1g1c_A Immunoglobulin-like dom 99.6 2.1E-14 7.1E-19 77.7 10.5 82 2-89 16-97 (99)
7 2kdg_A Myotilin; immonoglobuli 99.6 1.8E-14 6.1E-19 78.1 9.9 83 2-90 16-98 (100)
8 1u2h_A APEG-1, aortic preferen 99.6 3.9E-14 1.3E-18 76.6 11.2 82 2-89 16-97 (99)
9 2kkq_A Myotilin; unknown funct 99.6 2.2E-14 7.5E-19 80.0 9.9 87 2-93 26-112 (116)
10 3irg_B Obscurin-like protein 1 99.6 4.7E-14 1.6E-18 77.3 11.0 84 2-92 24-107 (107)
11 1fhg_A Telokin; immunoglobulin 99.6 5.8E-14 2E-18 81.9 11.8 88 2-95 52-139 (154)
12 1wwb_X Protein (brain derived 99.6 4.3E-14 1.5E-18 77.3 9.6 87 5-93 15-101 (103)
13 2dm2_A Palladin; beta-sandwich 99.6 1.8E-14 6E-19 79.5 8.1 87 2-93 19-105 (110)
14 2edj_A Roundabout homolog 2; K 99.6 2.4E-14 8.1E-19 77.7 7.9 81 2-91 19-99 (100)
15 2v9t_A Roundabout homolog 1; s 99.6 3.7E-14 1.3E-18 79.0 8.9 91 2-92 20-111 (117)
16 3puc_A Titin; I-SET IG-like do 99.6 2.3E-13 7.8E-18 73.5 11.5 81 2-89 17-97 (99)
17 1wit_A Twitchin 18TH IGSF modu 99.5 4.2E-14 1.5E-18 75.8 8.2 78 2-88 13-92 (93)
18 2yuz_A Myosin-binding protein 99.5 1.1E-13 3.6E-18 75.4 9.4 80 2-92 18-97 (100)
19 2lu7_A Obscurin-like protein 1 99.5 1.1E-13 3.8E-18 73.1 8.9 78 1-90 6-83 (84)
20 2bk8_A Connectin, M1, titin he 99.5 4.8E-13 1.6E-17 72.1 11.4 81 2-89 12-93 (97)
21 2dm3_A KIAA0992 protein, palla 99.5 9.8E-15 3.3E-19 80.5 4.6 86 2-93 20-105 (110)
22 3irg_A Titin; IG-like, titin, 99.5 2.5E-13 8.6E-18 73.3 10.2 83 2-89 16-98 (100)
23 1gxe_A Myosin binding protein 99.5 1.9E-14 6.4E-19 82.8 5.8 81 2-88 29-137 (139)
24 2dav_A SLOW MYBP-C, myosin-bin 99.5 6E-13 2E-17 75.2 11.5 91 1-92 17-113 (126)
25 3kvq_A Vascular endothelial gr 99.5 6.1E-14 2.1E-18 76.9 7.3 83 2-93 21-103 (108)
26 1he7_A High affinity nerve gro 99.5 1.7E-13 5.9E-18 77.4 9.0 84 6-93 15-102 (126)
27 3s35_X Vascular endothelial gr 99.5 2.8E-13 9.4E-18 75.9 9.8 95 2-97 19-117 (122)
28 2eo9_A Roundabout homolog 1; b 99.5 4.5E-14 1.5E-18 78.8 6.1 83 2-93 19-101 (118)
29 3caf_A Fibroblast growth facto 99.5 3.5E-13 1.2E-17 72.9 8.9 81 2-88 19-99 (100)
30 3bfo_A Mucosa-associated lymph 99.5 1.1E-13 3.6E-18 73.9 6.4 74 2-90 14-87 (91)
31 3cx2_A Myosin-binding protein 99.5 2.4E-12 8.2E-17 70.7 12.0 87 2-89 15-107 (108)
32 2yr3_A Myosin light chain kina 99.5 5.1E-14 1.8E-18 76.2 4.8 77 2-88 22-98 (99)
33 2ckn_A Basic fibroblast growth 99.5 1.9E-13 6.5E-18 73.5 6.8 75 2-88 20-94 (95)
34 1nct_A Titin; cell adhesion, g 99.5 1.5E-13 5E-18 75.5 5.6 81 2-89 25-105 (106)
35 2edn_A Myosin-binding protein 99.4 1.7E-12 5.8E-17 72.5 8.9 90 1-91 22-117 (118)
36 2lvc_A Obscurin-like protein 1 99.4 5.7E-13 1.9E-17 71.3 6.6 65 4-75 19-83 (91)
37 1waa_A Titin; metal binding pr 99.4 3.4E-12 1.2E-16 68.5 9.7 76 2-89 16-91 (93)
38 2r15_A Myomesin-1; sarcomeric 99.4 4.4E-12 1.5E-16 76.7 11.3 82 2-90 128-210 (212)
39 4hwu_A Fibroblast growth facto 99.4 1E-12 3.5E-17 70.6 7.5 78 2-92 12-89 (95)
40 2e6p_A Obscurin-like protein 1 99.4 1.1E-12 3.7E-17 71.6 7.7 80 2-93 21-100 (104)
41 1rhf_A Tyrosine-protein kinase 99.4 1.2E-11 4E-16 73.3 12.8 92 2-98 13-105 (182)
42 3m45_A Cell adhesion molecule 99.4 3.6E-12 1.2E-16 69.6 9.8 89 2-92 17-108 (108)
43 1gl4_B Basement membrane-speci 99.4 7.7E-13 2.6E-17 71.4 6.8 75 2-88 21-96 (98)
44 2cr3_A Basic fibroblast growth 99.4 2.2E-13 7.7E-18 73.8 4.7 78 2-91 14-91 (99)
45 2yd6_A PTPRD protein; hydrolas 99.4 7.4E-12 2.5E-16 76.1 11.7 89 3-94 120-208 (212)
46 2iep_A Muscle-specific kinase 99.4 1.4E-12 4.6E-17 77.9 8.2 82 2-92 111-192 (192)
47 2jll_A NCAM2, neural cell adhe 99.4 1.4E-11 4.6E-16 80.8 13.6 94 2-97 11-106 (389)
48 2v9r_A Roundabout homolog 1; p 99.4 9.5E-13 3.3E-17 79.6 7.4 87 2-97 122-209 (212)
49 2cpc_A KIAA0657 protein; immun 99.4 7.5E-12 2.6E-16 69.1 10.3 82 2-95 24-105 (113)
50 4fa8_A Secreted protein BARF1; 99.4 3.9E-12 1.3E-16 77.4 9.8 95 1-97 3-112 (203)
51 3mtr_A N-CAM-1, NCAM-1, neural 99.4 2.8E-12 9.7E-17 78.1 9.0 89 2-95 29-117 (215)
52 3rbs_A Myomesin-1; immunoglobu 99.4 4.9E-12 1.7E-16 77.1 9.7 77 2-87 127-204 (207)
53 2va4_A NCAM2, N-CAM 2, neural 99.4 9.4E-12 3.2E-16 74.1 10.7 86 2-97 15-101 (192)
54 2j8h_A Titin, connectin; cardi 99.4 1.9E-11 6.6E-16 73.2 12.0 88 2-95 15-103 (197)
55 1x44_A Myosin-binding protein 99.4 4.1E-12 1.4E-16 69.2 7.8 82 2-93 18-99 (103)
56 3lcy_A Titin; A-BAND, IG tande 99.4 4.4E-11 1.5E-15 71.4 12.9 87 2-95 18-104 (197)
57 2edf_A Obscurin; beta-sandwich 99.4 2.3E-12 8E-17 70.1 6.6 80 2-93 19-98 (103)
58 1wwc_A Protein (NT-3 growth fa 99.4 1.3E-11 4.4E-16 68.8 9.7 83 7-93 21-104 (118)
59 3b43_A Titin; I-SET IG fold, e 99.4 1.7E-11 5.7E-16 84.5 12.3 88 3-97 396-483 (570)
60 2cr6_A KIAA1556 protein, obscu 99.4 8.2E-13 2.8E-17 73.4 4.6 83 2-95 24-107 (115)
61 3so5_A LIG-3, leucine-rich rep 99.4 2.8E-11 9.6E-16 66.2 10.7 84 2-88 21-111 (112)
62 2yd1_A Tyrosine-protein phosph 99.3 5.4E-11 1.9E-15 72.2 12.6 85 2-91 17-103 (212)
63 3rbg_A Cytotoxic and regulator 99.3 1.1E-11 3.9E-16 69.6 8.9 90 2-93 12-104 (124)
64 2c5d_C AXL oncogene, tyrosine- 99.3 5.1E-11 1.7E-15 71.3 12.1 93 2-97 13-112 (195)
65 2y25_A Myomesin; structural pr 99.3 1.3E-11 4.4E-16 78.8 10.0 83 2-91 233-316 (317)
66 2yuv_A Myosin-binding protein 99.3 7.1E-12 2.4E-16 67.8 7.6 79 2-92 19-97 (100)
67 2cry_A KIN of IRRE-like protei 99.3 3.4E-13 1.2E-17 75.7 2.1 88 2-91 24-114 (122)
68 2ens_A Advanced glycosylation 99.3 8.2E-13 2.8E-17 71.1 3.5 73 2-89 21-94 (96)
69 2yd6_A PTPRD protein; hydrolas 99.3 8.3E-11 2.9E-15 71.4 12.8 84 2-91 17-101 (212)
70 2yd1_A Tyrosine-protein phosph 99.3 5.7E-12 1.9E-16 76.5 7.6 81 3-92 122-202 (212)
71 4fqp_A Poliovirus receptor; im 99.3 6.3E-12 2.2E-16 80.5 8.0 77 3-92 229-306 (313)
72 2a38_A Titin; Z1Z2, structural 99.3 2.3E-11 8E-16 72.6 10.0 83 2-89 16-98 (194)
73 2eny_A Obscurin; beta-sandwich 99.3 1.8E-12 6.1E-17 70.9 4.7 81 2-93 19-100 (104)
74 2iep_A Muscle-specific kinase 99.3 9.2E-11 3.2E-15 69.8 12.4 89 2-97 18-106 (192)
75 2rik_A Titin; I-SET IG fold, p 99.3 1.1E-10 3.9E-15 73.5 13.4 88 2-96 16-103 (284)
76 2j8h_A Titin, connectin; cardi 99.3 3.8E-11 1.3E-15 71.9 10.4 80 3-89 116-196 (197)
77 4fa8_A Secreted protein BARF1; 99.3 8E-12 2.7E-16 76.0 7.3 76 3-80 118-193 (203)
78 2edk_A Myosin-binding protein 99.3 2.3E-12 7.8E-17 69.9 4.2 82 2-91 19-100 (101)
79 2vr9_A Roundabout 1, ROBO; imm 99.3 2.2E-11 7.4E-16 74.0 9.0 87 2-90 20-106 (217)
80 2k1m_A Myosin-binding protein 99.3 3.7E-11 1.3E-15 64.4 9.0 75 2-88 19-93 (95)
81 2nzi_A Titin; IG-domain, FNIII 99.3 5.7E-11 1.9E-15 75.5 11.3 88 2-95 15-103 (305)
82 2e7b_A Obscurin; IG-like domai 99.3 1.8E-11 6E-16 66.5 7.6 79 2-92 19-97 (103)
83 1xau_A B- and T-lymphocyte att 99.3 7.4E-11 2.5E-15 64.1 9.8 88 2-90 25-116 (122)
84 3b43_A Titin; I-SET IG fold, e 99.3 6.6E-11 2.3E-15 81.6 12.2 109 3-118 303-412 (570)
85 2ec8_A MAST/stem cell growth f 99.3 7.8E-11 2.7E-15 80.2 12.3 92 2-98 324-419 (524)
86 3kld_A Contactin 4, axcam, BIG 99.3 3.3E-11 1.1E-15 79.3 10.0 84 3-97 217-301 (384)
87 2dku_A KIAA1556 protein; beta- 99.3 2.9E-11 9.9E-16 65.7 8.2 80 2-93 19-98 (103)
88 1epf_A NCAM, protein (neural c 99.3 1.4E-10 4.8E-15 69.1 11.9 92 2-97 13-106 (191)
89 2v44_A NCAM2, neural cell adhe 99.3 1.6E-10 5.4E-15 68.8 12.1 87 2-95 13-100 (189)
90 3qs7_E FL cytokine receptor; i 99.3 2.8E-11 9.4E-16 81.0 9.6 84 2-93 59-142 (423)
91 2edh_A Obscurin; structural ge 99.3 6.4E-11 2.2E-15 65.4 9.6 79 2-93 30-108 (113)
92 2rik_A Titin; I-SET IG fold, p 99.3 2.2E-10 7.5E-15 72.1 13.2 88 3-97 111-198 (284)
93 3s97_C Contactin-1; carbonic a 99.3 3.2E-11 1.1E-15 72.2 8.9 77 2-89 124-200 (201)
94 2a38_A Titin; Z1Z2, structural 99.3 4.8E-11 1.6E-15 71.2 9.6 79 3-88 115-193 (194)
95 1z9m_A GAPA225; nectin-like, I 99.3 3.5E-11 1.2E-15 69.3 8.7 90 2-93 49-141 (145)
96 3kld_A Contactin 4, axcam, BIG 99.3 1.4E-11 4.6E-16 81.2 7.8 77 2-89 306-382 (384)
97 2dlt_A Myosin binding protein 99.3 8.6E-12 2.9E-16 68.2 5.7 78 2-89 19-96 (106)
98 2wv3_A Neuroplastin; igcam, me 99.3 3.5E-10 1.2E-14 67.4 13.2 84 2-89 103-189 (190)
99 1bih_A Hemolin; insect immunit 99.3 2.8E-11 9.7E-16 79.4 9.1 92 2-99 223-316 (395)
100 2v9r_A Roundabout homolog 1; p 99.3 4.8E-11 1.7E-15 72.1 9.2 91 2-92 20-111 (212)
101 2e6q_A Obscurin-like protein 1 99.3 4.5E-11 1.5E-15 66.2 8.2 85 2-93 19-108 (112)
102 1qz1_A Neural cell adhesion mo 99.3 3.3E-11 1.1E-15 76.1 8.7 82 3-89 208-289 (291)
103 3mjg_X Beta-type platelet-deri 99.3 2.1E-10 7.1E-15 72.5 12.4 89 2-94 192-282 (289)
104 3r4d_A CEA-related cell adhesi 99.3 1.7E-11 5.8E-16 74.0 7.1 81 3-93 122-203 (208)
105 3lcy_A Titin; A-BAND, IG tande 99.3 7.9E-11 2.7E-15 70.3 9.7 80 3-89 115-195 (197)
106 2eo1_A OBSCN protein, cDNA FLJ 99.3 4.2E-11 1.4E-15 64.9 7.7 79 2-92 22-100 (102)
107 2yd9_A Receptor-type tyrosine- 99.3 1.3E-10 4.3E-15 74.1 11.1 84 2-91 17-101 (304)
108 2v5t_A NCAM2, N-CAM 2, neural 99.3 4.8E-11 1.6E-15 70.9 8.6 76 4-89 111-187 (189)
109 2wv3_A Neuroplastin; igcam, me 99.3 2.7E-11 9.2E-16 72.3 7.5 82 3-97 14-98 (190)
110 3p3y_A Neurofascin; IG domains 99.2 6.1E-11 2.1E-15 78.0 9.6 86 3-98 234-319 (404)
111 2wim_A N-CAM 2, NCAM2, neural 99.2 2.6E-11 8.8E-16 76.6 7.4 80 3-92 206-286 (291)
112 2x1w_L Vascular endothelial gr 99.2 1.2E-10 4.2E-15 70.8 10.2 88 2-94 116-211 (213)
113 3qr2_A Basigin; CD147, EMMPRIN 99.2 3.4E-11 1.2E-15 68.7 7.1 78 2-79 32-116 (137)
114 3laf_A Deleted in colorectal c 99.2 2.1E-11 7.1E-16 80.2 6.9 80 3-92 324-403 (403)
115 1fnl_A Low affinity immunoglob 99.2 1.2E-10 4E-15 68.9 9.5 75 2-90 99-174 (175)
116 3p2t_A Leukocyte immunoglobuli 99.2 2.8E-10 9.6E-15 68.3 11.3 81 2-90 15-96 (196)
117 2va4_A NCAM2, N-CAM 2, neural 99.2 3.5E-10 1.2E-14 67.2 11.6 84 3-88 106-191 (192)
118 3grw_A Fibroblast growth facto 99.2 1.4E-10 4.8E-15 71.4 10.1 92 3-95 126-223 (241)
119 3sgj_C Human FCG3A receptor; r 99.2 9.4E-11 3.2E-15 71.2 9.1 78 2-93 99-177 (204)
120 2ny1_B T-cell surface glycopro 99.2 4.8E-11 1.7E-15 70.9 7.7 75 2-93 108-182 (184)
121 1itb_B Type 1 interleukin-1 re 99.2 1.1E-10 3.6E-15 74.7 9.7 86 3-89 221-313 (315)
122 2ifg_A High affinity nerve gro 99.2 1.2E-10 4.2E-15 75.7 10.1 84 4-91 259-346 (347)
123 2d3v_A Leukocyte immunoglobuli 99.2 3.1E-10 1.1E-14 68.2 11.1 81 2-90 15-96 (196)
124 2id5_A Lingo-1, leucine rich r 99.2 3E-11 1E-15 81.6 7.0 81 2-89 396-476 (477)
125 3rbs_A Myomesin-1; immunoglobu 99.2 5.8E-10 2E-14 67.9 12.1 69 2-74 13-82 (207)
126 3qs9_E FL cytokine receptor; i 99.2 2E-11 6.8E-16 83.7 6.2 84 3-97 338-421 (527)
127 1qz1_A Neural cell adhesion mo 99.2 3.7E-10 1.3E-14 71.3 11.4 91 2-97 13-106 (291)
128 2v44_A NCAM2, neural cell adhe 99.2 1.4E-10 4.7E-15 69.1 8.9 71 2-79 107-177 (189)
129 3laf_A Deleted in colorectal c 99.2 2.2E-10 7.5E-15 75.3 10.7 87 3-98 233-319 (403)
130 1cs6_A Axonin-1; neural cell a 99.2 8.5E-11 2.9E-15 77.0 8.5 77 2-89 305-381 (382)
131 1pd6_A Cardiac MYBP-C;, myosin 99.2 2.3E-10 7.9E-15 62.5 8.9 67 2-74 27-93 (104)
132 1f2q_A High affinity immunoglo 99.2 7.6E-11 2.6E-15 69.7 7.4 78 2-93 96-174 (176)
133 3uto_A Twitchin; kinase, muscl 99.2 2.8E-10 9.7E-15 78.8 11.3 80 2-88 493-572 (573)
134 2nzi_A Titin; IG-domain, FNIII 99.2 4.5E-10 1.5E-14 71.4 11.5 86 3-95 116-202 (305)
135 3sgj_C Human FCG3A receptor; r 99.2 1.8E-10 6E-15 69.9 9.1 78 2-98 18-96 (204)
136 4frw_A Poliovirus receptor-rel 99.2 1.1E-10 3.9E-15 70.3 8.1 79 4-88 131-209 (218)
137 3k0w_A Mucosa-associated lymph 99.2 5.4E-11 1.9E-15 72.6 6.5 76 2-92 129-204 (218)
138 2v5m_A Dscam; neurobiology SPL 99.2 7.9E-11 2.7E-15 77.2 7.7 89 3-97 224-313 (388)
139 2ocw_A Polymeric-immunoglobuli 99.2 5.8E-10 2E-14 76.7 12.2 92 2-93 453-549 (585)
140 2dm7_A KIAA1556 protein; beta- 99.2 2E-10 6.9E-15 62.8 8.1 78 2-92 19-96 (108)
141 4fom_A Poliovirus receptor-rel 99.2 4E-12 1.4E-16 81.1 1.3 79 3-93 224-303 (308)
142 1vca_A VCAM-D1,2, human vascul 99.2 5.3E-10 1.8E-14 67.7 10.6 81 3-93 13-93 (202)
143 3ojm_B Fibroblast growth facto 99.2 1.7E-10 5.8E-15 70.4 8.5 84 2-91 30-113 (231)
144 3ojm_B Fibroblast growth facto 99.2 2.2E-10 7.6E-15 69.9 8.9 93 2-95 129-226 (231)
145 1bih_A Hemolin; insect immunit 99.2 9.7E-11 3.3E-15 76.9 7.7 75 2-88 320-394 (395)
146 2v5t_A NCAM2, N-CAM 2, neural 99.2 2.9E-10 9.9E-15 67.4 9.1 87 2-95 13-100 (189)
147 2aw2_A B and T lymphocyte atte 99.2 1.9E-09 6.6E-14 58.0 11.0 84 2-90 22-110 (120)
148 2yd9_A Receptor-type tyrosine- 99.2 4E-10 1.4E-14 71.8 10.1 81 3-89 120-200 (304)
149 3bp6_B Programmed cell death 1 99.2 9.6E-11 3.3E-15 70.5 6.7 79 3-90 115-193 (202)
150 1epf_A NCAM, protein (neural c 99.2 1.6E-10 5.6E-15 68.8 7.7 70 3-79 112-181 (191)
151 1fnl_A Low affinity immunoglob 99.2 3.3E-10 1.1E-14 66.9 8.9 72 2-92 18-90 (175)
152 1gsm_A Madcam-1, mucosal addre 99.2 1.4E-10 4.7E-15 70.9 7.3 103 2-118 18-122 (210)
153 2vr9_A Roundabout 1, ROBO; imm 99.2 1.5E-10 5.3E-15 70.2 7.5 82 3-88 120-205 (217)
154 3bp6_B Programmed cell death 1 99.2 7E-10 2.4E-14 66.7 10.3 86 2-92 13-105 (202)
155 2y23_A Myomesin; structural pr 99.2 2.7E-10 9.4E-15 72.5 8.8 78 2-88 232-310 (312)
156 3ry4_A Low affinity immunoglob 99.1 2.5E-10 8.7E-15 66.8 8.0 73 2-88 96-169 (170)
157 2v5m_A Dscam; neurobiology SPL 99.1 2.1E-10 7.2E-15 75.2 8.4 86 2-95 15-107 (388)
158 2xot_A Amphoterin-induced prot 99.1 1.5E-10 5.3E-15 75.8 7.7 82 1-90 256-337 (361)
159 3oq3_B IFN-alpha/beta binding 99.1 2.8E-10 9.7E-15 73.4 8.6 80 4-92 141-226 (329)
160 2o26_X MAST/stem cell growth f 99.1 2.5E-10 8.4E-15 72.2 8.2 86 3-92 200-290 (290)
161 3k0w_A Mucosa-associated lymph 99.1 2E-10 6.9E-15 70.1 7.6 75 2-91 29-103 (218)
162 3ejj_X Macrophage colony-stimu 99.1 7.5E-10 2.6E-14 69.8 10.4 83 4-92 199-283 (289)
163 2c5d_C AXL oncogene, tyrosine- 99.1 2.3E-10 7.7E-15 68.5 7.5 74 2-88 117-191 (195)
164 3p3y_A Neurofascin; IG domains 99.1 2E-10 6.9E-15 75.5 7.9 80 2-89 323-402 (404)
165 3ry4_A Low affinity immunoglob 99.1 1.1E-09 3.6E-14 64.2 10.2 74 2-94 15-89 (170)
166 3b5h_A Cervical EMMPRIN, HAB18 99.1 1.4E-09 4.8E-14 64.4 10.8 83 3-89 95-182 (184)
167 3qs7_E FL cytokine receptor; i 99.1 6.9E-11 2.4E-15 79.0 5.6 80 3-93 338-417 (423)
168 3dmk_A DOWN syndrome cell adhe 99.1 1.9E-09 6.5E-14 76.9 13.1 91 3-95 441-531 (816)
169 3grw_A Fibroblast growth facto 99.1 4.3E-10 1.5E-14 69.2 8.6 83 2-90 26-108 (241)
170 3q0h_A T cell immunoreceptor w 99.1 6E-10 2.1E-14 62.0 8.4 89 2-95 14-113 (117)
171 1ugn_A LIR1, leukocyte immunog 99.1 1.1E-09 3.6E-14 65.9 10.1 83 2-89 111-197 (198)
172 3sbw_C Programmed cell death 1 99.1 4E-10 1.4E-14 68.6 8.2 83 3-92 128-213 (222)
173 2jll_A NCAM2, neural cell adhe 99.1 5.8E-10 2E-14 73.1 9.3 86 3-93 112-197 (389)
174 4i0k_A CD276 antigen; immunogl 99.1 4.4E-10 1.5E-14 68.4 8.2 86 3-93 122-209 (222)
175 2fbo_J V1V2;, variable region- 99.1 2.5E-10 8.7E-15 70.6 7.2 73 3-79 148-239 (250)
176 1f97_A Junction adhesion molec 99.1 4.8E-10 1.7E-14 67.6 8.1 85 2-90 115-207 (212)
177 3jz7_A MCAR, CAR, coxsackievir 99.1 7.4E-11 2.5E-15 71.2 4.3 77 3-90 133-212 (214)
178 1dr9_A B7-1 (CD80), T lymphocy 99.1 9.8E-10 3.4E-14 66.0 9.2 72 4-79 119-191 (201)
179 1rhf_A Tyrosine-protein kinase 99.1 8.6E-10 3E-14 65.2 8.8 72 2-88 109-181 (182)
180 3d9a_L Light chain of hyhel10 99.1 1.3E-09 4.6E-14 65.9 9.5 88 2-90 12-108 (213)
181 1cs6_A Axonin-1; neural cell a 99.1 3.5E-10 1.2E-14 74.0 7.2 83 4-94 20-103 (382)
182 2d3v_A Leukocyte immunoglobuli 99.1 6.5E-10 2.2E-14 66.8 7.8 70 3-77 111-180 (196)
183 3zyj_A Leucine-rich repeat-con 99.1 4E-10 1.4E-14 75.6 7.5 85 2-93 352-436 (440)
184 3pv7_A B7-H6, IG-like domain-c 99.1 2.3E-09 7.9E-14 66.4 10.4 114 2-116 14-144 (248)
185 2wim_A N-CAM 2, NCAM2, neural 99.1 2.5E-09 8.7E-14 67.4 10.6 87 2-95 15-102 (291)
186 1sy6_A T-cell surface glycopro 99.1 4.2E-10 1.4E-14 68.3 6.7 75 5-88 127-202 (204)
187 3u83_A Poliovirus receptor-rel 99.1 3.7E-10 1.3E-14 72.6 6.7 78 3-93 244-323 (331)
188 3b5h_A Cervical EMMPRIN, HAB18 99.1 3E-09 1E-13 63.0 10.2 80 2-98 9-90 (184)
189 1uct_A Immunoglobulin alpha FC 99.1 1.5E-09 5E-14 66.6 9.0 82 2-90 19-102 (218)
190 2gi7_A GPVI protein; IG-like d 99.1 8.4E-10 2.9E-14 65.7 7.7 72 2-90 18-90 (184)
191 1f2q_A High affinity immunoglo 99.1 7.2E-10 2.4E-14 65.5 7.3 72 2-92 15-87 (176)
192 3p2t_A Leukocyte immunoglobuli 99.1 1.2E-09 4.1E-14 65.5 8.3 80 3-88 111-194 (196)
193 2oz4_A Intercellular adhesion 99.1 2.9E-10 1E-14 71.2 5.8 69 2-90 196-264 (265)
194 1jhl_L IGG1-kappa D11.15 FV (l 99.1 2.7E-09 9.3E-14 58.4 9.0 86 2-88 12-106 (108)
195 4f80_A Butyrophilin subfamily 99.1 3.4E-10 1.2E-14 69.3 5.9 83 3-90 130-213 (226)
196 1hng_A CD2; T lymphocyte adhes 99.1 6.5E-10 2.2E-14 65.9 6.9 86 2-91 7-100 (176)
197 3udw_C Poliovirus receptor; PV 99.0 1.9E-09 6.5E-14 59.5 8.2 90 2-92 11-118 (118)
198 1e07_A Carcinoembryonic antige 99.0 1.7E-09 5.7E-14 75.3 9.6 71 2-90 570-640 (642)
199 2ec8_A MAST/stem cell growth f 99.0 7.5E-09 2.6E-13 70.5 12.4 91 2-98 222-317 (524)
200 3rjd_A High affinity immunoglo 99.0 2.6E-09 8.8E-14 66.4 9.4 72 2-92 12-84 (262)
201 3rjd_A High affinity immunoglo 99.0 4.2E-09 1.4E-13 65.4 10.3 74 2-90 93-167 (262)
202 1oll_A NK receptor; immune sys 99.0 9.3E-09 3.2E-13 61.4 11.4 81 2-90 14-95 (188)
203 2vsd_A CHIR AB1; immune system 99.0 1.5E-09 5.3E-14 59.2 7.2 78 3-90 16-96 (105)
204 1f97_A Junction adhesion molec 99.0 7.6E-10 2.6E-14 66.7 6.5 89 2-95 12-108 (212)
205 1ugn_A LIR1, leukocyte immunog 99.0 5.3E-10 1.8E-14 67.2 5.7 81 2-90 15-97 (198)
206 1nkr_A P58-CL42 KIR; inhibitor 99.0 1.2E-08 4.3E-13 61.4 11.7 83 2-90 18-104 (201)
207 4f80_A Butyrophilin subfamily 99.0 8.9E-09 3.1E-13 63.0 11.1 78 2-79 15-109 (226)
208 1z7z_I Intercellular adhesion 99.0 5E-10 1.7E-14 74.8 5.7 69 2-90 381-449 (450)
209 3jz7_A MCAR, CAR, coxsackievir 99.0 2.5E-09 8.4E-14 64.4 8.2 89 2-95 11-125 (214)
210 3v2a_R Vascular endothelial gr 99.0 3.5E-11 1.2E-15 85.0 0.0 83 3-95 678-761 (772)
211 1pko_A Myelin oligodendrocyte 99.0 9.8E-09 3.3E-13 58.5 10.3 88 2-90 17-121 (139)
212 1lk3_L 9D7 light chain; antige 99.0 5.4E-09 1.8E-13 63.2 9.6 88 2-90 11-107 (210)
213 2qsq_A Carcinoembryonic antige 99.0 6.1E-09 2.1E-13 57.5 8.9 85 2-90 11-109 (111)
214 3s96_B 3B5H10 FAB light chain; 99.0 1.5E-08 5.1E-13 61.4 11.4 87 2-89 11-115 (218)
215 3dmk_A DOWN syndrome cell adhe 99.0 3.8E-09 1.3E-13 75.3 10.0 90 3-98 631-721 (816)
216 3r4d_A CEA-related cell adhesi 99.0 1.4E-08 4.9E-13 61.0 11.0 86 2-91 10-109 (208)
217 3r06_A Anti-mouse CD3epsilon a 99.0 5.1E-09 1.8E-13 63.3 9.0 86 2-88 12-106 (213)
218 3khq_A B-cell antigen receptor 99.0 1.4E-09 4.7E-14 61.9 6.0 88 2-93 28-120 (133)
219 1hng_A CD2; T lymphocyte adhes 99.0 1.3E-09 4.3E-14 64.7 5.9 57 6-79 110-166 (176)
220 1nbq_A JAM, junctional adhesio 99.0 4.8E-10 1.7E-14 67.4 4.2 83 2-88 118-207 (209)
221 3mj8_L Stimulatory hamster ant 99.0 9.1E-09 3.1E-13 62.2 9.8 87 2-89 11-108 (213)
222 1wio_A CD4, T-cell surface gly 99.0 5.8E-09 2E-13 68.0 9.4 86 2-90 187-293 (363)
223 1itb_B Type 1 interleukin-1 re 99.0 3E-09 1E-13 67.9 7.7 68 3-79 115-189 (315)
224 1vca_A VCAM-D1,2, human vascul 99.0 9E-09 3.1E-13 62.3 9.5 89 3-93 103-200 (202)
225 1dr9_A B7-1 (CD80), T lymphocy 99.0 1.1E-09 3.8E-14 65.8 5.4 87 1-91 4-107 (201)
226 1ry7_B FGFR-3, fibroblast grow 99.0 9.3E-10 3.2E-14 70.8 5.3 87 2-92 233-329 (334)
227 2v5y_A Receptor-type tyrosine- 99.0 9.5E-09 3.2E-13 72.8 10.8 91 2-98 175-268 (731)
228 3oq3_B IFN-alpha/beta binding 99.0 9.9E-09 3.4E-13 66.2 10.1 85 2-88 239-328 (329)
229 3nl4_L Antigen binding fragmen 99.0 1.5E-08 5E-13 61.3 10.3 88 2-90 12-110 (213)
230 2wng_A Tyrosine-protein phosph 99.0 5.4E-09 1.8E-13 67.2 8.7 92 2-93 14-118 (327)
231 3zyi_A Leucine-rich repeat-con 99.0 9.5E-10 3.2E-14 74.0 5.3 84 2-93 363-446 (452)
232 4dep_C Interleukin-1 receptor 98.9 4.6E-09 1.6E-13 68.0 8.3 78 3-90 132-217 (349)
233 1jbj_A CD3 epsilon and gamma e 98.9 7E-10 2.4E-14 66.3 4.1 59 5-79 121-179 (186)
234 2r15_A Myomesin-1; sarcomeric 98.9 5.1E-09 1.7E-13 63.1 7.9 75 6-87 17-92 (212)
235 1uct_A Immunoglobulin alpha FC 98.9 1.3E-09 4.3E-14 66.9 5.3 81 2-92 116-200 (218)
236 2ghw_B Anti-SARS SCFV antibody 98.9 7.6E-09 2.6E-13 64.0 8.8 87 2-89 146-241 (247)
237 4hwn_A FC receptor-like A; FCR 98.9 3.5E-09 1.2E-13 58.1 6.4 74 3-90 19-99 (108)
238 4dep_C Interleukin-1 receptor 98.9 1.6E-09 5.5E-14 70.1 5.9 87 1-92 17-117 (349)
239 2q20_A VK1 O18/O8 germline lig 98.9 4.2E-08 1.4E-12 53.7 10.7 86 2-88 14-108 (109)
240 1qfw_M FV, antibody (anti beta 98.9 1.5E-08 5.1E-13 55.4 8.8 74 2-76 12-94 (108)
241 2ywz_A NEW antigen receptor va 98.9 3.1E-08 1E-12 54.5 10.0 72 2-74 11-87 (111)
242 3o3u_N Maltose-binding peripla 98.9 1.5E-09 5.2E-14 74.8 5.7 87 2-92 377-471 (581)
243 1eaj_A Coxsackie virus and ade 98.9 1.2E-08 4E-13 56.7 8.4 88 2-90 16-125 (126)
244 2if7_A SLAM family member 6; N 98.9 1.4E-08 4.9E-13 60.9 9.3 85 2-91 9-107 (193)
245 1h5b_A Murine T cell receptor 98.9 5.5E-08 1.9E-12 53.5 10.9 75 2-77 12-95 (113)
246 3s97_C Contactin-1; carbonic a 98.9 8.6E-09 2.9E-13 61.5 8.1 72 2-79 19-92 (201)
247 2x1w_L Vascular endothelial gr 98.9 4.2E-09 1.5E-13 64.0 6.8 78 2-89 18-100 (213)
248 2ifg_A High affinity nerve gro 98.9 1.7E-09 5.7E-14 70.4 5.2 84 2-94 169-253 (347)
249 1ry7_B FGFR-3, fibroblast grow 98.9 7.6E-10 2.6E-14 71.2 3.6 82 3-90 135-216 (334)
250 2wng_A Tyrosine-protein phosph 98.9 9.1E-09 3.1E-13 66.1 8.5 81 4-87 233-317 (327)
251 2znx_A SCFV; fluorotryptohpan, 98.9 3E-08 1E-12 61.4 10.5 90 2-92 12-110 (242)
252 2e27_L Anti-ciguatoxin antibod 98.9 1.9E-08 6.4E-13 56.1 8.7 88 2-90 14-110 (119)
253 3mj6_A Junctional adhesion mol 98.9 4.4E-09 1.5E-13 65.7 6.7 84 2-90 129-237 (268)
254 1oll_A NK receptor; immune sys 98.9 5.4E-09 1.8E-13 62.4 6.7 77 2-89 109-187 (188)
255 1i8k_A Epidermal growth factor 98.9 1.4E-08 4.8E-13 55.4 7.8 74 2-76 12-94 (107)
256 1moe_A Anti-CEA MAB T84.66; an 98.9 1.9E-08 6.6E-13 61.9 9.2 89 2-91 12-113 (240)
257 2ocw_A Polymeric-immunoglobuli 98.9 2.7E-08 9.3E-13 68.5 10.8 94 2-96 11-117 (585)
258 3umt_A SCFV heavy chain and li 98.9 1.9E-08 6.5E-13 62.7 9.2 90 2-92 149-247 (256)
259 1jbj_A CD3 epsilon and gamma e 98.9 1.2E-09 4.2E-14 65.2 3.7 68 3-88 11-79 (186)
260 3esu_F Antibody 14B7* light ch 98.9 2.5E-08 8.7E-13 61.8 9.7 88 2-90 15-111 (250)
261 1mqk_L Antibody 7E2 FV fragmen 98.9 3.1E-08 1E-12 55.3 9.1 88 2-90 12-109 (120)
262 2y25_A Myomesin; structural pr 98.9 2.5E-09 8.5E-14 68.1 5.2 78 2-88 17-95 (317)
263 3u83_A Poliovirus receptor-rel 98.9 4.8E-08 1.6E-12 62.7 11.2 86 3-95 144-235 (331)
264 3sbw_C Programmed cell death 1 98.9 3.6E-08 1.2E-12 59.8 10.0 90 2-93 12-118 (222)
265 1e07_A Carcinoembryonic antige 98.9 1.8E-08 6.1E-13 70.2 9.5 80 3-92 123-203 (642)
266 2oz4_A Intercellular adhesion 98.9 2.8E-08 9.7E-13 62.1 9.5 80 2-91 14-98 (265)
267 3uzq_A Anti-dengue MAB 4E11; d 98.9 1.7E-07 5.8E-12 58.3 12.9 89 2-90 12-117 (253)
268 2o26_X MAST/stem cell growth f 98.9 8.4E-09 2.9E-13 65.2 7.0 78 2-89 102-182 (290)
269 4fmk_A Poliovirus receptor-rel 98.9 1E-08 3.5E-13 62.0 7.0 88 2-93 12-123 (225)
270 4frw_A Poliovirus receptor-rel 98.9 5E-08 1.7E-12 58.6 10.0 90 1-90 9-116 (218)
271 3r08_E T-cell surface glycopro 98.8 6.7E-10 2.3E-14 58.0 1.4 56 2-74 10-66 (82)
272 1p6f_A NKP46, natural cytotoxi 98.8 9.9E-08 3.4E-12 59.4 11.5 81 2-90 17-98 (242)
273 3auv_A SC-DSFV derived from th 98.8 2.4E-08 8.3E-13 63.0 8.8 89 2-91 23-120 (276)
274 1q0x_L FAB 9B1, light chain; a 98.8 3.6E-08 1.2E-12 59.6 9.2 86 2-88 11-108 (212)
275 2c1o_A IGK-C protein; FAB frag 98.8 3.2E-08 1.1E-12 61.5 9.1 88 2-90 49-150 (254)
276 2gi7_A GPVI protein; IG-like d 98.8 4.2E-09 1.4E-13 62.7 5.0 64 3-77 105-168 (184)
277 4dzb_B Vbeta2 (MAIT T cell rec 98.8 6.4E-08 2.2E-12 59.8 10.5 87 2-90 12-117 (246)
278 3o4o_C Interleukin-1 receptor 98.8 2E-09 6.7E-14 69.5 3.7 84 2-92 29-119 (339)
279 1wio_A CD4, T-cell surface gly 98.8 4.9E-09 1.7E-13 68.4 5.6 73 3-92 108-180 (363)
280 3uzq_A Anti-dengue MAB 4E11; d 98.8 2.1E-08 7.2E-13 62.4 8.2 92 2-94 144-248 (253)
281 2y23_A Myomesin; structural pr 98.8 5E-08 1.7E-12 62.0 10.1 71 2-76 118-189 (312)
282 3tv3_L PGT128 light chain, IG 98.8 4.1E-08 1.4E-12 59.3 9.3 85 2-89 11-105 (211)
283 1nbq_A JAM, junctional adhesio 98.8 3.5E-09 1.2E-13 63.6 4.5 89 2-95 15-111 (209)
284 1sq2_N Novel antigen receptor; 98.8 6.7E-08 2.3E-12 53.3 9.3 72 2-74 11-87 (113)
285 3vh8_G Killer cell immunoglobu 98.8 1.2E-07 4.2E-12 60.6 11.9 82 3-90 130-215 (316)
286 1nqb_A Single-chain antibody f 98.8 3.5E-08 1.2E-12 61.7 9.1 88 2-90 132-233 (256)
287 2pet_A Lutheran blood group gl 98.8 6.7E-09 2.3E-13 63.4 5.7 87 2-93 11-117 (231)
288 1ccz_A Protein (CD58); LFA-3, 98.8 1.5E-08 5.2E-13 59.8 7.0 82 2-91 6-95 (171)
289 1hnf_A CD2; T lymphocyte adhes 98.8 1.3E-08 4.6E-13 60.8 6.7 85 2-90 10-104 (182)
290 3ejj_X Macrophage colony-stimu 98.8 2.1E-08 7.1E-13 63.1 7.9 79 2-89 100-180 (289)
291 4fqp_A Poliovirus receptor; im 98.8 2.3E-08 7.8E-13 63.9 8.1 93 3-95 12-121 (313)
292 4gos_A V-SET domain-containing 98.8 4.1E-08 1.4E-12 55.2 8.1 87 2-89 16-119 (125)
293 3qs9_E FL cytokine receptor; i 98.8 4.2E-08 1.4E-12 67.4 9.6 79 2-88 59-137 (527)
294 4dkd_C Macrophage colony-stimu 98.8 2.1E-08 7.1E-13 63.2 7.5 84 4-92 199-283 (292)
295 1nkr_A P58-CL42 KIR; inhibitor 98.8 4.9E-08 1.7E-12 58.8 8.8 66 2-75 118-183 (201)
296 3mjg_X Beta-type platelet-deri 98.8 3.2E-08 1.1E-12 62.4 8.2 66 2-78 11-76 (289)
297 3sob_L Antibody light chain; b 98.8 1.4E-07 4.8E-12 57.7 10.9 88 2-90 35-131 (237)
298 1pew_A JTO2, A lambda-6 type i 98.8 5.2E-08 1.8E-12 53.3 8.0 75 2-76 11-95 (109)
299 2p1y_A Bispecific alpha/beta T 98.8 1.4E-07 4.7E-12 58.0 10.8 75 2-76 138-222 (238)
300 3moq_A NEW antigen receptor va 98.8 1.1E-07 3.7E-12 53.6 9.3 75 2-77 11-90 (126)
301 1svz_A Immunoglobulin;, single 98.8 1.5E-07 5E-12 58.3 10.9 89 2-91 12-114 (247)
302 2pet_A Lutheran blood group gl 98.8 1.4E-08 4.9E-13 61.9 6.2 71 5-75 132-211 (231)
303 3o4o_C Interleukin-1 receptor 98.8 5.2E-08 1.8E-12 62.8 9.0 80 3-90 132-220 (339)
304 2rcj_C Light chain; immunoglob 98.8 8.6E-08 2.9E-12 65.3 10.4 86 2-88 11-107 (523)
305 1zox_A CLM-1; IG-superfamily, 98.8 3E-07 1E-11 50.4 10.8 89 2-91 12-111 (113)
306 1nqb_A Single-chain antibody f 98.8 3.9E-07 1.3E-11 56.9 12.6 93 2-94 11-124 (256)
307 1i3g_L Antibody FV fragment; a 98.8 1.2E-07 4.3E-12 52.0 9.2 74 2-76 15-97 (111)
308 3nfj_J T cell receptor beta ch 98.8 9.8E-08 3.4E-12 59.0 9.8 89 2-90 12-116 (245)
309 1b6u_A KIR2DL3, P58 killer cel 98.8 1.5E-07 5.2E-12 59.1 10.6 83 2-90 17-103 (257)
310 3bkj_L WO2 IGG2A FAB fragment 98.8 2E-07 6.9E-12 57.9 11.1 88 2-90 45-146 (252)
311 3kg5_A B-cell antigen receptor 98.8 1.7E-07 5.8E-12 53.4 9.8 89 2-93 29-122 (134)
312 2q87_A CMRF35-H antigen; all-b 98.8 1E-07 3.5E-12 52.1 8.7 91 2-92 7-108 (110)
313 2coq_A NEW antigen receptor va 98.8 5.7E-08 2E-12 53.1 7.6 72 2-74 11-87 (108)
314 1p6f_A NKP46, natural cytotoxi 98.8 2.8E-08 9.7E-13 61.8 7.0 80 2-92 112-193 (242)
315 3mj8_L Stimulatory hamster ant 98.8 1.3E-08 4.4E-13 61.5 5.4 72 5-79 128-203 (213)
316 4fom_A Poliovirus receptor-rel 98.8 1.8E-08 6.3E-13 64.1 6.2 84 5-95 128-215 (308)
317 2yc1_B Single chain antibody f 98.8 2.2E-07 7.7E-12 53.6 10.2 90 2-92 27-125 (146)
318 4dkd_C Macrophage colony-stimu 98.8 7.4E-09 2.5E-13 65.3 4.3 86 2-97 100-192 (292)
319 2fbo_J V1V2;, variable region- 98.8 9.5E-09 3.2E-13 63.4 4.7 86 2-91 13-132 (250)
320 1j05_L T84.66 antibody, anti-C 98.8 4.6E-08 1.6E-12 53.7 6.9 73 2-75 12-97 (111)
321 4ffy_L DENV1-E111 single chain 98.8 8.1E-08 2.8E-12 54.0 8.1 88 2-90 12-112 (126)
322 3vh8_G Killer cell immunoglobu 98.7 3.2E-08 1.1E-12 63.3 7.0 82 3-92 230-315 (316)
323 1c1e_H Catalytic antibody 1E9 98.7 2.9E-07 9.8E-12 55.9 10.9 89 2-90 11-119 (219)
324 2if7_A SLAM family member 6; N 98.7 7.4E-08 2.5E-12 57.8 8.0 57 6-79 123-182 (193)
325 3gkz_A Anti-methamphetamine si 98.7 3.8E-08 1.3E-12 61.3 7.0 90 2-92 152-251 (257)
326 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.7 1.5E-07 5.3E-12 58.6 9.7 88 2-90 14-116 (256)
327 1f3r_B FV antibody fragment; I 98.7 1.6E-08 5.6E-13 63.1 5.2 86 3-90 151-245 (257)
328 1mju_H Immunoglobulin MS6-12; 98.7 6.8E-07 2.3E-11 54.8 12.4 89 2-90 11-116 (227)
329 2oyp_A Hepatitis A virus cellu 98.7 1.4E-07 4.6E-12 51.3 8.3 87 2-89 5-107 (109)
330 3gkz_A Anti-methamphetamine si 98.7 1E-06 3.5E-11 54.8 13.3 90 2-91 19-127 (257)
331 2ghw_B Anti-SARS SCFV antibody 98.7 7.6E-07 2.6E-11 55.0 12.6 89 2-90 13-119 (247)
332 1qok_A MFE-23 recombinant anti 98.7 9.4E-08 3.2E-12 60.5 8.7 87 2-90 173-268 (282)
333 2p1y_A Bispecific alpha/beta T 98.7 5.4E-08 1.8E-12 59.8 7.3 88 2-90 11-114 (238)
334 3juy_B 3B3 single chain varian 98.7 5.1E-07 1.7E-11 56.2 11.8 74 1-75 16-107 (256)
335 3q5y_A TCR N15 beta; IG, T cel 98.7 4.3E-07 1.5E-11 55.9 11.4 85 2-89 13-113 (240)
336 2d9c_A Signal-regulatory prote 98.7 1.1E-07 3.8E-12 54.0 8.1 91 2-92 19-123 (136)
337 3juy_B 3B3 single chain varian 98.7 1.3E-07 4.4E-12 58.9 9.1 86 2-88 160-255 (256)
338 3noi_A Natural cytotoxicity tr 98.7 5.5E-08 1.9E-12 54.1 6.6 87 2-88 18-117 (120)
339 3rrq_A Protein PD-1, programme 98.7 1.2E-07 4.1E-12 53.5 8.0 91 2-92 12-117 (129)
340 3bqu_C 3H6 FAB light chain; be 98.7 4.6E-09 1.6E-13 64.4 2.3 88 2-90 34-130 (233)
341 2rcj_C Light chain; immunoglob 98.7 5.3E-08 1.8E-12 66.3 7.7 74 4-79 127-204 (523)
342 3ux9_B SCFV antibody; five hel 98.7 7.9E-07 2.7E-11 55.2 12.4 90 2-92 13-115 (256)
343 3omz_A Human vdelta1 gamma del 98.7 2.7E-07 9.4E-12 57.5 10.3 90 2-91 13-119 (259)
344 2d9q_B Granulocyte colony-stim 98.7 3.9E-08 1.3E-12 63.1 6.6 86 2-94 11-101 (313)
345 1eeq_A Kappa-4 immunoglobulin 98.7 1.4E-07 4.8E-12 52.0 7.8 86 2-88 12-112 (114)
346 2ptt_A CD48 antigen; CD244, CD 98.7 1.2E-07 4.2E-12 51.8 7.4 83 2-90 14-108 (110)
347 2yz1_A Tyrosine-protein phosph 98.7 1.7E-07 5.7E-12 52.0 8.1 75 2-76 18-101 (120)
348 3auv_A SC-DSFV derived from th 98.7 2.7E-07 9.3E-12 58.1 9.8 90 2-91 145-255 (276)
349 2xzc_L FAB A.17 light chain; i 98.7 4E-07 1.4E-11 55.1 10.3 87 2-89 11-109 (216)
350 2jju_A Signal regulatory prote 98.7 2.7E-07 9.3E-12 51.8 8.8 74 2-75 14-96 (127)
351 3eow_R Poliovirus receptor; im 98.7 1.6E-08 5.4E-13 61.6 4.0 93 2-95 10-120 (221)
352 2or8_A Hepatitis A virus cellu 98.7 6.6E-07 2.3E-11 49.1 10.3 77 2-78 8-98 (116)
353 2fbj_H IGA-kappa J539 FAB (hea 98.7 7.5E-07 2.6E-11 54.3 11.5 89 2-90 11-118 (220)
354 1ncn_A T lymphocyte activation 98.7 4.7E-07 1.6E-11 49.4 9.5 75 1-79 4-95 (110)
355 2gki_A Nuclease; anti-DNA anti 98.7 1.3E-07 4.4E-12 60.2 8.2 91 2-93 170-275 (291)
356 1i1r_A GP130, interleukin-6 re 98.7 8.8E-07 3E-11 56.5 12.1 82 2-93 15-105 (303)
357 4ei6_B Vbeta16 XV19 type II na 98.7 1.1E-06 3.7E-11 54.2 12.2 86 2-89 13-115 (245)
358 2rgs_A I, IG gamma-2B heavy ch 98.7 5.4E-08 1.8E-12 59.4 6.1 73 3-78 23-101 (218)
359 1op3_H FAB 2G12, heavy chain; 98.7 1.3E-06 4.4E-11 53.4 12.4 89 2-90 11-123 (225)
360 2zg1_A Sialic acid-binding IG- 98.7 3.5E-08 1.2E-12 59.6 5.2 63 4-78 136-202 (214)
361 3nl4_H Antigen binding fragmen 98.7 3E-07 1E-11 55.8 9.3 88 1-89 9-114 (215)
362 1qgc_4 Protein (immunoglobulin 98.7 2.1E-07 7.2E-12 61.9 9.3 88 2-90 12-112 (438)
363 1olz_A Semaphorin 4D; developm 98.7 3.3E-08 1.1E-12 69.5 5.6 87 2-97 544-634 (663)
364 1b6u_A KIR2DL3, P58 killer cel 98.7 3.9E-08 1.3E-12 61.8 5.4 81 3-94 118-205 (257)
365 1nfd_E H57 FAB; complex (immun 98.7 8.3E-08 2.8E-12 58.0 6.6 72 2-74 10-90 (212)
366 1q9r_B S25-2 FAB (IGG1K) heavy 98.7 1.2E-06 4.2E-11 53.2 11.9 90 1-90 10-122 (222)
367 2gjj_A A21 single-chain antibo 98.7 1.6E-07 5.4E-12 59.0 8.1 89 2-91 16-119 (264)
368 2edo_A CD48 antigen; beta-sand 98.7 5.5E-08 1.9E-12 54.3 5.3 88 1-92 14-112 (121)
369 1neu_A Myelin P0 protein; stru 98.7 6.4E-07 2.2E-11 49.7 9.8 87 2-92 10-121 (124)
370 1q0x_L FAB 9B1, light chain; a 98.7 5.9E-08 2E-12 58.6 5.9 72 5-78 129-204 (212)
371 1fo0_A Protein (BM3.3 T cell r 98.7 1.7E-07 5.7E-12 51.9 7.2 73 2-74 11-95 (116)
372 1z7z_I Intercellular adhesion 98.7 4.9E-07 1.7E-11 60.4 10.8 79 2-90 199-282 (450)
373 1oaq_L Light chain; antibody, 98.6 3.5E-07 1.2E-11 50.8 8.5 89 2-91 11-111 (120)
374 1za6_B IGG heavy chain; immuno 98.6 2.8E-07 9.6E-12 59.7 9.3 87 2-89 11-114 (344)
375 3ux9_B SCFV antibody; five hel 98.6 3.6E-07 1.2E-11 56.8 9.4 73 3-75 146-235 (256)
376 3umt_A SCFV heavy chain and li 98.6 1.3E-06 4.3E-11 54.4 11.8 89 2-90 13-121 (256)
377 1dlf_L Anti-dansyl immunoglobu 98.6 4.1E-07 1.4E-11 50.0 8.6 86 2-88 12-111 (113)
378 3d9a_L Light chain of hyhel10 98.6 3.3E-08 1.1E-12 59.7 4.5 73 5-78 126-202 (213)
379 1qgc_4 Protein (immunoglobulin 98.6 5E-07 1.7E-11 60.1 10.5 88 2-89 229-337 (438)
380 2ny1_B T-cell surface glycopro 98.6 6.1E-08 2.1E-12 57.4 5.6 74 2-77 6-92 (184)
381 1xt5_A Variable region-contain 98.6 8E-08 2.7E-12 54.2 5.8 74 2-77 15-116 (135)
382 1sy6_A T-cell surface glycopro 98.6 5E-08 1.7E-12 59.1 5.2 55 4-74 16-70 (204)
383 2qhl_A Novel immune-type recep 98.6 3.8E-07 1.3E-11 50.0 8.3 73 2-75 10-98 (111)
384 3esu_F Antibody 14B7* light ch 98.6 1.8E-07 6E-12 58.0 7.6 73 2-74 142-231 (250)
385 1qok_A MFE-23 recombinant anti 98.6 3.3E-06 1.1E-10 53.4 13.6 90 2-91 37-147 (282)
386 2dru_A Chimera of CD48 antigen 98.6 3E-07 1E-11 54.6 8.3 84 2-91 10-105 (180)
387 3tv3_L PGT128 light chain, IG 98.6 4.3E-08 1.5E-12 59.2 4.6 73 5-79 125-201 (211)
388 1f3r_B FV antibody fragment; I 98.6 7.6E-07 2.6E-11 55.5 10.3 76 2-77 11-102 (257)
389 1pz5_B Heavy chain of FAB (SYA 98.6 1E-06 3.5E-11 53.5 10.7 88 2-89 11-119 (220)
390 3bj9_1 Immunoglobulin IOTA cha 98.6 8.3E-07 2.8E-11 48.9 9.4 88 2-89 9-113 (116)
391 3kgr_A LAIR-1, hlair1, leukocy 98.6 1.1E-06 3.7E-11 47.9 9.7 84 2-90 19-103 (106)
392 1l6x_A Immunoglobulin gamma-1 98.6 4E-07 1.4E-11 55.0 8.6 72 4-79 16-94 (207)
393 3r0n_A Poliovirus receptor-rel 98.6 3.5E-07 1.2E-11 51.2 7.8 27 2-28 13-43 (128)
394 4esk_A LAIR-1, mlair1, leukocy 98.6 3E-06 1E-10 45.9 11.2 76 3-89 20-100 (102)
395 2zg1_A Sialic acid-binding IG- 98.6 3.5E-07 1.2E-11 55.2 8.2 90 2-91 11-123 (214)
396 3s96_B 3B5H10 FAB light chain; 98.6 9.1E-08 3.1E-12 57.9 5.6 72 5-79 135-210 (218)
397 3pl6_D MBP peptide / T-cell re 98.6 1.7E-06 5.8E-11 54.1 11.3 88 2-90 37-138 (268)
398 3d9a_H Heavy chain of hyhel10 98.6 1.3E-06 4.5E-11 52.6 10.5 86 2-89 11-112 (210)
399 3v2a_R Vascular endothelial gr 98.6 7.5E-07 2.6E-11 63.1 10.7 92 2-95 235-331 (772)
400 2wbj_D OB TCR; transmembrane, 98.6 8.6E-07 2.9E-11 55.9 9.9 74 2-75 35-122 (279)
401 1nfd_E H57 FAB; complex (immun 98.6 1.1E-08 3.8E-13 61.8 1.2 73 5-79 127-202 (212)
402 3eow_R Poliovirus receptor; im 98.6 1.3E-07 4.5E-12 57.5 5.9 81 5-93 129-213 (221)
403 1u3h_A T-cell receptor alpha-c 98.0 6.2E-09 2.1E-13 57.2 0.0 74 2-75 10-93 (110)
404 3fku_X Neutralizing antibody F 98.6 5.1E-07 1.8E-11 57.1 8.8 75 1-75 10-101 (280)
405 2j6e_L IGM, FAB light chain; a 98.6 5.2E-08 1.8E-12 59.7 4.1 73 5-79 149-225 (234)
406 2vol_A Murine IGG FC; FC, zinc 98.6 8.3E-08 2.8E-12 58.1 4.9 74 3-79 15-94 (207)
407 1lk3_L 9D7 light chain; antige 98.6 7.1E-08 2.4E-12 58.2 4.6 73 5-78 125-201 (210)
408 4ety_A LAIR-1, mlair1, leukocy 98.6 3.5E-06 1.2E-10 46.8 10.9 79 2-91 19-102 (118)
409 4gjt_B Poliovirus receptor-rel 98.6 1.5E-07 5.1E-12 52.6 5.3 88 2-90 11-117 (123)
410 3bik_B Programmed cell death p 98.6 1.9E-06 6.5E-11 48.9 10.0 91 2-92 20-125 (134)
411 3mj6_A Junctional adhesion mol 98.5 5E-07 1.7E-11 56.3 8.2 83 2-88 16-120 (268)
412 4i0k_A CD276 antigen; immunogl 98.5 4.8E-08 1.6E-12 59.3 3.4 85 1-91 5-108 (222)
413 3u6r_L Antibody 1:7 (light cha 98.5 2.6E-06 8.8E-11 49.0 10.4 87 2-90 11-106 (143)
414 2i24_N NEW antigen receptor PB 98.5 1.7E-06 5.8E-11 48.3 9.4 72 2-74 11-87 (121)
415 3bp6_A Programmed cell death p 98.5 2.3E-06 7.8E-11 47.3 9.9 88 2-89 10-112 (117)
416 1i1c_A IGG2A, IG gamma-2A chai 98.5 7.9E-08 2.7E-12 59.6 4.3 74 3-79 29-108 (239)
417 1c5d_H Monoclonal antibody aga 98.5 3.3E-06 1.1E-10 51.2 11.4 89 1-89 10-116 (215)
418 1ccz_A Protein (CD58); LFA-3, 98.5 2.3E-07 7.9E-12 54.7 6.1 54 9-79 108-161 (171)
419 1hnf_A CD2; T lymphocyte adhes 98.5 2.8E-07 9.5E-12 55.0 6.4 58 6-80 115-172 (182)
420 2xzc_L FAB A.17 light chain; i 98.5 1.4E-07 4.9E-12 57.1 5.2 73 5-78 128-204 (216)
421 1fo0_B Protein (BM3.3 T cell r 98.5 5.9E-07 2E-11 49.4 7.2 70 2-75 12-96 (112)
422 3to4_D NKT vbeta2 (mouse varia 98.5 3.8E-06 1.3E-10 52.2 11.7 71 2-76 12-97 (253)
423 3pv7_A B7-H6, IG-like domain-c 98.5 1.8E-07 6E-12 57.9 5.5 84 5-88 132-224 (248)
424 1x9q_A SCFV, 4M5.3 anti-fluore 98.5 3.4E-07 1.2E-11 57.4 6.9 88 2-90 26-127 (268)
425 1igt_B IGG2A intact antibody - 98.5 4E-07 1.4E-11 60.9 7.6 73 4-79 253-331 (444)
426 2oi9_C V beta, T cell receptor 98.5 6.5E-06 2.2E-10 45.8 11.4 87 2-89 12-110 (121)
427 1dee_B IGM RF 2A2; FAB-IBP com 98.5 3.7E-06 1.3E-10 51.3 11.3 89 1-89 10-120 (223)
428 3bae_H WO2 IGG2A FAB fragment 98.5 3.3E-06 1.1E-10 51.7 11.0 77 1-77 10-104 (228)
429 1hkf_A NKP44, NK cell activati 98.5 3.8E-06 1.3E-10 46.9 10.3 87 2-88 21-119 (122)
430 2z35_A T-cell receptor alpha-c 98.5 1.2E-06 4.1E-11 48.0 8.1 72 2-73 11-92 (112)
431 1moe_A Anti-CEA MAB T84.66; an 98.5 4E-06 1.4E-10 51.4 11.3 73 2-74 130-219 (240)
432 1q9r_B S25-2 FAB (IGG1K) heavy 98.5 1.2E-07 4.3E-12 57.7 4.5 70 4-79 140-213 (222)
433 2otu_A FV light chain variable 98.5 1.6E-06 5.5E-11 47.8 8.5 74 2-76 12-99 (115)
434 1n26_A IL-6 receptor alpha cha 98.5 2E-07 7E-12 60.1 5.5 78 3-93 18-96 (325)
435 3nl4_L Antigen binding fragmen 98.5 7.2E-08 2.5E-12 58.2 3.2 68 5-73 128-198 (213)
436 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.5 1.8E-06 6.1E-11 53.8 9.6 88 2-90 148-248 (256)
437 3qib_D 2B4 beta chain; IG doma 98.5 4.1E-06 1.4E-10 52.5 11.1 88 2-90 38-141 (270)
438 1igt_B IGG2A intact antibody - 98.5 3.4E-06 1.2E-10 56.4 11.3 89 1-89 10-117 (444)
439 2xqy_G A13-D6.3 monoclonal ant 98.5 3.6E-06 1.2E-10 52.8 10.8 89 2-90 17-124 (261)
440 2atp_B T-cell surface glycopro 98.5 2.5E-06 8.4E-11 46.9 8.9 73 2-75 9-101 (115)
441 3r8b_B G5-8, enterotoxin type 98.5 5.5E-06 1.9E-10 46.4 10.3 88 2-89 16-115 (125)
442 1tvd_A T cell receptor, ES204 98.5 6.1E-06 2.1E-10 45.4 10.3 73 2-75 11-98 (116)
443 1p4b_L Antibody variable light 98.5 1.9E-06 6.6E-11 49.0 8.4 88 2-90 16-115 (135)
444 2nw2_A ELS4 TCR alpha chain; T 98.5 3.9E-06 1.3E-10 50.8 10.2 89 2-90 10-110 (200)
445 1kxv_C Camelid VHH domain CAB1 98.5 7.9E-06 2.7E-10 45.3 10.8 74 2-75 11-100 (121)
446 1hzh_H IGG, immunoglobulin hea 98.5 7.6E-06 2.6E-10 54.9 12.6 76 2-77 11-103 (457)
447 2wzp_D Camelid VHH5; baseplate 98.5 9.3E-06 3.2E-10 45.2 11.1 74 2-75 11-101 (123)
448 2eys_A NKT15; natural killer T 98.5 3.8E-06 1.3E-10 51.2 10.2 89 2-90 14-116 (210)
449 1nko_A Sialic acid binding IG- 98.5 1.2E-06 3.9E-11 49.4 7.4 91 2-92 17-129 (132)
450 2j6e_L IGM, FAB light chain; a 98.5 1.4E-07 4.6E-12 57.8 3.7 75 2-77 30-115 (234)
451 1x9q_A SCFV, 4M5.3 anti-fluore 98.4 2.8E-06 9.5E-11 53.2 9.7 73 3-75 163-254 (268)
452 1hxm_B Gamma-delta T-cell rece 98.4 5.9E-06 2E-10 51.0 11.0 89 2-90 12-123 (242)
453 1dn0_B IGM-kappa cold agglutin 98.4 1.5E-05 5.1E-10 49.0 12.8 90 1-90 10-120 (232)
454 3bn9_D E2 FAB heavy chain; ant 98.4 4.9E-06 1.7E-10 52.2 10.6 76 2-77 11-103 (257)
455 3fku_X Neutralizing antibody F 98.4 1.6E-06 5.6E-11 54.8 8.6 90 2-92 150-252 (280)
456 3m8o_H Immunoglobulin A1 heavy 98.4 6.6E-06 2.3E-10 50.0 11.0 88 2-89 11-118 (221)
457 1svz_A Immunoglobulin;, single 98.4 2.1E-06 7.3E-11 53.0 8.9 73 3-75 139-228 (247)
458 2q86_A Valpha14 TCR; INKT cell 98.4 5.7E-06 1.9E-10 51.1 10.7 89 2-90 12-110 (229)
459 2c1o_A IGK-C protein; FAB frag 98.4 1.7E-07 5.7E-12 58.2 3.9 73 5-78 168-244 (254)
460 3t0v_A Immunoglobulin variable 98.4 3.8E-06 1.3E-10 47.0 9.1 88 2-90 11-111 (123)
461 2fbj_H IGA-kappa J539 FAB (hea 98.4 1.2E-06 4.3E-11 53.3 7.7 73 4-80 135-212 (220)
462 2gjj_A A21 single-chain antibo 98.4 4.1E-06 1.4E-10 52.5 10.1 87 3-89 150-257 (264)
463 1bec_A 14.3.D T cell antigen r 98.4 4.4E-06 1.5E-10 51.4 10.1 88 2-90 10-113 (238)
464 4fmk_A Poliovirus receptor-rel 98.4 2.4E-06 8.1E-11 51.4 8.7 69 6-79 136-207 (225)
465 3sob_L Antibody light chain; b 98.4 2.1E-07 7.2E-12 56.9 4.0 74 5-79 149-226 (237)
466 3b9v_A Heavy chain variable do 98.4 6.9E-06 2.4E-10 45.5 9.9 74 2-75 11-101 (120)
467 1dlf_H Anti-dansyl immunoglobu 98.4 1.1E-05 3.7E-10 45.0 10.7 75 1-75 10-103 (124)
468 1u9k_A Triggering receptor exp 98.4 2.4E-06 8E-11 47.0 7.7 76 2-77 10-100 (114)
469 1ypz_E T cell receptor delta, 98.4 3.4E-06 1.2E-10 51.1 9.1 74 2-76 12-94 (207)
470 1n4x_H Immunoglobulin heavy ch 98.4 1.5E-05 5.1E-10 44.1 11.1 74 2-75 11-101 (120)
471 2gki_A Nuclease; anti-DNA anti 98.4 9.5E-06 3.2E-10 51.5 11.5 89 2-90 33-142 (291)
472 3liz_H 4C3 monoclonal antibody 98.4 9.6E-06 3.3E-10 50.4 11.3 89 1-89 10-118 (253)
473 1ypz_F T-cell receptor gamma c 98.4 7.3E-06 2.5E-10 50.3 10.6 88 2-89 12-118 (230)
474 1yc7_A Anti-VSG immunoglobulin 98.4 1.6E-05 5.5E-10 44.4 11.1 74 2-75 11-100 (124)
475 3r06_A Anti-mouse CD3epsilon a 98.4 4.2E-07 1.4E-11 54.8 4.9 73 5-78 126-202 (213)
476 1mfa_H IGG1-lambda Se155-4 FAB 98.4 3.1E-05 1.1E-09 42.8 12.1 74 2-75 11-101 (120)
477 2or7_A T-cell immunoglobulin a 98.4 3.8E-06 1.3E-10 46.1 8.1 88 1-89 7-109 (115)
478 1pz5_B Heavy chain of FAB (SYA 98.4 6.1E-07 2.1E-11 54.5 5.3 70 4-79 138-211 (220)
479 3bqu_C 3H6 FAB light chain; be 98.4 1E-07 3.5E-12 58.4 1.8 72 5-77 148-223 (233)
480 1mju_H Immunoglobulin MS6-12; 98.4 2.8E-07 9.7E-12 56.5 3.7 70 4-79 134-207 (227)
481 2yc1_A Single chain antibody f 98.4 8.3E-06 2.8E-10 44.9 9.3 74 2-75 11-101 (117)
482 2h32_A Immunoglobulin IOTA cha 98.4 2.3E-06 8E-11 48.0 7.1 87 2-89 11-114 (126)
483 2p45_B Antibody CAB-RN05; seMe 98.4 1.3E-05 4.5E-10 44.5 10.2 74 2-75 13-103 (123)
484 1a2y_B IGG1-kappa D1.3 FV (hea 98.4 1.1E-05 3.8E-10 44.4 9.7 75 1-75 10-100 (116)
485 2nms_A CMRF35-like-molecule 1; 98.4 3.2E-05 1.1E-09 43.1 11.6 90 2-92 13-113 (124)
486 1c1e_H Catalytic antibody 1E9 98.4 2.1E-07 7.2E-12 56.5 2.7 70 4-79 137-210 (219)
487 1j05_H T84.66 antibody, anti-C 98.4 2.7E-05 9.4E-10 43.1 11.2 74 2-75 11-101 (121)
488 1dn0_B IGM-kappa cold agglutin 98.4 2.6E-06 8.9E-11 52.4 7.6 71 5-79 139-217 (232)
489 1lp9_E T-cell receptor alpha c 98.3 3.8E-06 1.3E-10 50.5 8.1 73 2-74 12-94 (194)
490 3gsn_A RA14 TCR alpha chain (T 98.3 7.7E-06 2.6E-10 49.5 9.4 89 2-90 11-109 (199)
491 2znx_A SCFV; fluorotryptohpan, 98.3 1.5E-05 5.2E-10 49.1 10.9 74 2-75 133-222 (242)
492 3cx5_J Heavy chain (VH) of FV- 98.3 3E-05 1E-09 43.4 11.3 75 1-75 10-101 (127)
493 4ei6_A Valpha1 XV19 type II na 98.3 4.7E-06 1.6E-10 50.8 8.4 89 2-90 13-114 (208)
494 2w59_A IGY FCU3-4; immunoglobu 98.3 6.8E-07 2.3E-11 55.0 4.7 71 4-78 26-102 (231)
495 1hzh_H IGG, immunoglobulin hea 98.3 4.3E-06 1.5E-10 56.1 8.9 71 4-78 262-339 (457)
496 2dru_A Chimera of CD48 antigen 98.3 1.8E-06 6.2E-11 51.2 6.4 56 6-79 115-171 (180)
497 3bkj_L WO2 IGG2A FAB fragment 98.3 4.6E-07 1.6E-11 56.3 3.8 73 5-78 164-240 (252)
498 3dmm_D T-cell surface glycopro 98.3 1.3E-05 4.4E-10 46.3 9.7 88 2-90 12-119 (150)
499 2xt1_B Camelid VHH 9; viral pr 98.3 1.5E-05 5.2E-10 44.3 9.7 72 2-73 13-101 (121)
500 1dee_B IGM RF 2A2; FAB-IBP com 98.3 2.7E-06 9.3E-11 51.9 7.1 72 4-79 139-217 (223)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=9.5e-17 Score=88.62 Aligned_cols=84 Identities=27% Similarity=0.431 Sum_probs=63.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+... .+......+.. ....|..++.+|.|.|.|.+.|..|.. +
T Consensus 24 ~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~N~~G~~-~ 96 (107)
T 3knb_B 24 RVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS-----ERLSFPADGAE-HGLLLTAALPTDAGVYVCRARNAAGEA-Y 96 (107)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-----SSEECCEETTE-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCcEEEEEEEEEecCCEEEEEECcccccce-----eeEEEeecCce-EEEEEecCChhhCEEEEEEEEECCCEE-E
Confidence 4678999999999999999999999999987643 12222222222 233567889999999999999999987 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 97 ~~~~l~V~~pP 107 (107)
T 3knb_B 97 AAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEC--
T ss_pred EEEEEEEEcCC
Confidence 67888887654
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.68 E-value=7e-16 Score=84.11 Aligned_cols=83 Identities=22% Similarity=0.450 Sum_probs=62.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+.... ..+......... ....|.+++..|.|.|.|.+.|..|.. +
T Consensus 16 ~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~---~~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~a~N~~G~~-~ 90 (100)
T 3knb_A 16 SIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE---QGRFHIENTDDL-TTLIIMDVQKQDGGLYTLSLGNEFGSD-S 90 (100)
T ss_dssp EEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG---GGTEEEEECSSE-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCeEEEEEEEEEecCCEEEEEECceEeeeec---cceeeeecccce-EEEEEcCCCccCCEEEEEEEEECCCEE-E
Confidence 46789999999999999999999999999876421 122222333332 234567889999999999999999987 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 91 ~~~~l~V~ 98 (100)
T 3knb_A 91 ATVNIHIR 98 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 67777764
No 3
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=6.1e-15 Score=81.90 Aligned_cols=86 Identities=20% Similarity=0.180 Sum_probs=64.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... .......... .....|..++..|.|.|.|.+.|..|.. .
T Consensus 18 ~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-----~~~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~N~~g~~-~ 90 (114)
T 2cqv_A 18 KVRAGESVELFGKVTGTQPITCTWMKFRKQIQES-----EHMKVENSEN-GSKLTILAARQEHCGCYTLLVENKLGSR-Q 90 (114)
T ss_dssp EEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS-----SSEEEEECSS-EEEEEETTCCTTTCEEEEEEEECSSCEE-E
T ss_pred EEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC-----CCEEEEEcCC-EEEEEECCCChhcCEEEEEEEEECCCcE-E
Confidence 4678999999999999999999999999876532 1222222222 2234568889999999999999999977 5
Q ss_pred eeEEEEEEeeeee
Q psy8666 82 RNATLQVAVVIFF 94 (124)
Q Consensus 82 ~~~~l~v~~~~~~ 94 (124)
..+.|.|...|..
T Consensus 91 ~~~~l~V~~~p~~ 103 (114)
T 2cqv_A 91 AQVNLTVVDKPDP 103 (114)
T ss_dssp CCEEEEEECSCSC
T ss_pred EEEEEEEECCCCC
Confidence 6888888776643
No 4
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=81.34 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=62.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ......... .....|..++..|.|.|.|.+.|..|.. +
T Consensus 35 ~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~------~~~~~~~~~-~~~L~i~~~~~~D~G~Y~C~a~N~~G~~-~ 106 (118)
T 2e7c_A 35 IRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS------RVHVRTSDF-DTVFFVRQAARSDSGEYELSVQIENMKD-T 106 (118)
T ss_dssp EEESSSCEEEEEEEEEESCCEEEEEETTEECCCS------SCEEEECSS-EEEEEESSCCTTTCEEEEEEEECSSCEE-C
T ss_pred EEECCCEEEEEEEEccCCCCEEEEEECCEECCCC------cEEEEECCC-eEEEEECCCChhcCEEEEEEEEeCCCeE-E
Confidence 4678999999999999999999999999887521 111111222 2223567789999999999999999976 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|...|
T Consensus 107 ~~~~l~V~~~P 117 (118)
T 2e7c_A 107 ATIRIRVVEKA 117 (118)
T ss_dssp CEEEEEEECCC
T ss_pred EEEEEEEEcCC
Confidence 67788876654
No 5
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.61 E-value=3.6e-14 Score=77.30 Aligned_cols=83 Identities=24% Similarity=0.336 Sum_probs=62.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ........... ....|..++..|.|.|.|.+.|..|.. +
T Consensus 19 ~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~a~N~~G~~-~ 91 (103)
T 3qp3_A 19 RVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES-----SKIHYTNTSGV-LTLEILDCHTDDSGTYRAVCTNYKGEA-S 91 (103)
T ss_dssp EEETTCCEEEEEEEEEESCCEEEEEETTEECCCC-----SSEEEEEETTE-EEEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC-----CCEEEEECCCE-EEEEEcCCCcccCEEEEEEEEeCCCcE-E
Confidence 4678999999999999999999999999887642 12222222222 223467779999999999999999987 5
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
..+.|.|...
T Consensus 92 ~~~~l~V~~~ 101 (103)
T 3qp3_A 92 DYATLDVTGG 101 (103)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEECC
Confidence 6777777543
No 6
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=2.1e-14 Score=77.68 Aligned_cols=82 Identities=27% Similarity=0.400 Sum_probs=59.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... .......... .....|..++.+|.|.|.|.+.|..|.. .
T Consensus 16 ~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~----~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~N~~g~~-~ 89 (99)
T 1g1c_A 16 TVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSD----RIYWYWPEDN-VCELVIRDVTGEDSASIMVKAINIAGET-S 89 (99)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS----SEEEEEEETT-EEEEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCC----CEEEEEcCCC-EEEEEECCCCcCCCEEEEEEEEECCCcE-E
Confidence 46789999999999999999999999998876321 1111111122 1223467779999999999999999887 4
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 90 ~~~~l~V~ 97 (99)
T 1g1c_A 90 SHAFLLVQ 97 (99)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 56666664
No 7
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=78.08 Aligned_cols=83 Identities=24% Similarity=0.515 Sum_probs=61.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... .........+ . ....|..++..|.|.|.|.+.|..|.. +
T Consensus 16 ~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~---~~~~~~~~~~-~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~ 89 (100)
T 2kdg_A 16 SIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDD---LHKMIVSEKG-L-HSLIFEVVRASDAGAYACVAKNRAGEA-T 89 (100)
T ss_dssp EEETTCCEEEEEECEEESCCEEEEEETTEEECCCS---SSCEEEETTT-E-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCC---cEEEEEcCCC-e-EEEEECCCCcccCEEEEEEEEcCCCeE-E
Confidence 46789999999999999999999999998876431 1111122222 1 223467789999999999999999886 5
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 90 ~~~~l~V~~ 98 (100)
T 2kdg_A 90 FTVQLDVLA 98 (100)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEe
Confidence 677777654
No 8
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.60 E-value=3.9e-14 Score=76.56 Aligned_cols=82 Identities=23% Similarity=0.444 Sum_probs=60.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... ........+.. ....|..++..|.|.|.|.+.|..|.. .
T Consensus 16 ~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~----~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~a~N~~g~~-~ 89 (99)
T 1u2h_A 16 SVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQ----RRFAEEAEGGL-CRLRILAAERGDAGFYTCKAVNEYGAR-Q 89 (99)
T ss_dssp EEETTCCEEEEEEEEEESCCEEEEEETTEECCCBT----TEEEEECGGGE-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC----CEEEEECCCCE-EEEEEccCCcCCCEEEEEEEEECCCce-e
Confidence 46789999999999999999999999998775321 12222222222 234567789999999999999999887 4
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 90 ~~~~l~V~ 97 (99)
T 1u2h_A 90 CEARLEVR 97 (99)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 56666664
No 9
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=2.2e-14 Score=80.04 Aligned_cols=87 Identities=21% Similarity=0.358 Sum_probs=62.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... .................|..++..|.|.|.|.+.|..|.. .
T Consensus 26 ~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~----~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~-~ 100 (116)
T 2kkq_A 26 KVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN----TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVT-T 100 (116)
T ss_dssp EEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC----BTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC----CCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeE-E
Confidence 4678999999999999999999999999876532 1122222222111122344459999999999999999887 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 101 ~~~~l~V~~~p~ 112 (116)
T 2kkq_A 101 CNTRLDVTARPN 112 (116)
T ss_dssp EEEEEEEECCSC
T ss_pred EEEEEEEeCCCC
Confidence 678888877654
No 10
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.59 E-value=4.7e-14 Score=77.28 Aligned_cols=84 Identities=27% Similarity=0.431 Sum_probs=61.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ........+... ...|..++..|.|.|.|.+.|..|.. .
T Consensus 24 ~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~~~~~~~~~-~L~i~~~~~~D~G~Y~C~a~n~~g~~-~ 96 (107)
T 3irg_B 24 RVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS-----ERLSFPADGAEH-GLLLTAALPTDAGVYVCRARNAAGEA-Y 96 (107)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCC-----SSEECCEETTEE-EEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC-----CcEEEEeCCCEE-EEEEccCCHHhCEEEEEEEEcCCCcE-E
Confidence 4678999999999999999999999999877532 122222223222 23467779999999999999999887 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 97 ~~~~l~V~~~P 107 (107)
T 3irg_B 97 AAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEC--
T ss_pred EEEEEEEEcCC
Confidence 67777776654
No 11
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.59 E-value=5.8e-14 Score=81.92 Aligned_cols=88 Identities=27% Similarity=0.333 Sum_probs=63.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ................|..++..|.|.|.|.+.|..|.. .
T Consensus 52 ~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~-~ 125 (154)
T 1fhg_A 52 EVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES-----RHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEA-T 125 (154)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCS-----SSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC-----CcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeE-E
Confidence 4678999999999999999999999999877632 122222111112334567889999999999999999987 5
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
..+.|.|..+|...
T Consensus 126 ~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 126 CTAELLVETMGKEG 139 (154)
T ss_dssp EEEEEEEECC----
T ss_pred EEEEEEEeCcCcCC
Confidence 67888888776544
No 12
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.57 E-value=4.3e-14 Score=77.28 Aligned_cols=87 Identities=14% Similarity=0.258 Sum_probs=60.7
Q ss_pred cCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceeeeE
Q psy8666 5 KNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSRNA 84 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 84 (124)
.+..+.+.|.+.|.|.|.++|+|+|..+..... ..................|..++.+|.|.|.|.+.|..|.. ...+
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~-~~~~ 92 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKY-ICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKD-EKQI 92 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSS-EEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCc-EeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcE-eEEE
Confidence 356788999999999999999999998764310 00011111122222334567779999999999999999988 5677
Q ss_pred EEEEEeeee
Q psy8666 85 TLQVAVVIF 93 (124)
Q Consensus 85 ~l~v~~~~~ 93 (124)
.|.|...|.
T Consensus 93 ~l~V~~~P~ 101 (103)
T 1wwb_X 93 SAHFMGWPG 101 (103)
T ss_dssp EECCSCCCC
T ss_pred EEEECCCCC
Confidence 887766653
No 13
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.8e-14 Score=79.51 Aligned_cols=87 Identities=26% Similarity=0.399 Sum_probs=64.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... ................|..++..|.|.|.|.+.|..|.. +
T Consensus 19 ~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~-~ 93 (110)
T 2dm2_A 19 KIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKS----DHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI-S 93 (110)
T ss_dssp EEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTC----SSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCE-E
T ss_pred EEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC----CeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeE-E
Confidence 46789999999999999999999999998765321 122222221222334567889999999999999999987 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..++.
T Consensus 94 ~~~~l~V~~~~~ 105 (110)
T 2dm2_A 94 CTGRLMVQAVNS 105 (110)
T ss_dssp ECCCEEEECCSC
T ss_pred EEEEEEEECCCC
Confidence 677888877654
No 14
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=77.67 Aligned_cols=81 Identities=32% Similarity=0.546 Sum_probs=61.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... .........+.+. |..++..|.|.|.|.+.|..|.. .
T Consensus 19 ~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~----~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~n~~g~~-~ 89 (100)
T 2edj_A 19 TLAVDGTALLKCKATGDPLPVISWLKEGFTFPGR----DPRATIQEQGTLQ----IKNLRISDTGTYTCVATSSSGET-S 89 (100)
T ss_dssp EEESSSEEEECCEEECSSCCEEEEEESSSEESSS----CSSCEECTTCCEE----EESCCTTTCCEEEEEEECSSCCC-B
T ss_pred EEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCC----CCCEEEcCCCEEE----EccCCcccCEEEEEEEEcCCCCE-E
Confidence 4678999999999999999999999999876522 1222233445543 45559999999999999999887 5
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
..+.|.|..+
T Consensus 90 ~~~~l~V~~~ 99 (100)
T 2edj_A 90 WSAVLDVTES 99 (100)
T ss_dssp CCEEEEEESC
T ss_pred EEEEEEEecC
Confidence 6777777654
No 15
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.56 E-value=3.7e-14 Score=79.02 Aligned_cols=91 Identities=60% Similarity=1.029 Sum_probs=63.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEE-EcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRV-VHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.|.|.|.+.|+|++..+...............++.+.+..+ +..++..|.|.|.|.+.|..|...
T Consensus 20 ~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~ 99 (117)
T 2v9t_A 20 IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (117)
T ss_dssp EECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEE
T ss_pred EEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceE
Confidence 4678999999999999999999999999887643211112233344444433221 124578999999999999999987
Q ss_pred eeeEEEEEEeee
Q psy8666 81 SRNATLQVAVVI 92 (124)
Q Consensus 81 ~~~~~l~v~~~~ 92 (124)
+..+.|.+..+.
T Consensus 100 s~~~~l~~~~~~ 111 (117)
T 2v9t_A 100 SHDASLEVAAAA 111 (117)
T ss_dssp CCCEEEEEC---
T ss_pred eeeEEEEhhhhh
Confidence 778888876654
No 16
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.56 E-value=2.3e-13 Score=73.46 Aligned_cols=81 Identities=27% Similarity=0.526 Sum_probs=60.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ........... ....|..++..|.|.|.|.+.|..|.. +
T Consensus 17 ~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~ 89 (99)
T 3puc_A 17 TVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG-----GKYKLSEDKGG-FFLEIHKTDTSDSGLYTCTVKNSAGSV-S 89 (99)
T ss_dssp EEESSSCEEEEEEEEEESCCEEEEEETTEECCSS-----SSEEEEEETTE-EEEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC-----CCEEEEEeCCE-EEEEECCCCcccCEEEEEEEEeCCCcE-e
Confidence 4678999999999999999999999999877532 12222222222 223457779999999999999999887 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 90 ~~~~l~V~ 97 (99)
T 3puc_A 90 SSCKLTIK 97 (99)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 56676664
No 17
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.55 E-value=4.2e-14 Score=75.75 Aligned_cols=78 Identities=18% Similarity=0.181 Sum_probs=57.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.|.|.|.+.|+|++ ..+... ... ... ... ....|..++..|.|.|.|.+.|..|..
T Consensus 13 ~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~-----~~~-~~~-~~~-~~L~i~~~~~~D~G~Y~C~a~N~~G~~ 84 (93)
T 1wit_A 13 KIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE-----LLV-DAK-SST-TSIFFPSAKRADSGNYKLKVKNELGED 84 (93)
T ss_dssp EECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT-----SEE-EEE-TTE-EEEECTTBCGGGCEEEEEEEEETTEEE
T ss_pred EEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc-----EEE-Eec-CCE-EEEEECCCChhcCEEEEEEEEcCCCeE
Confidence 4678999999999999999999999999 665421 111 111 111 234567889999999999999999976
Q ss_pred eeeeEEEEE
Q psy8666 80 VSRNATLQV 88 (124)
Q Consensus 80 ~~~~~~l~v 88 (124)
+..+.|.|
T Consensus 85 -~~~~~l~V 92 (93)
T 1wit_A 85 -EAIFEVIV 92 (93)
T ss_dssp -EEEEEEEE
T ss_pred -EEEEEEEE
Confidence 55666654
No 18
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.1e-13 Score=75.38 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=59.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+ .|.|.+.|+|+|..+... ........+.. ....|.+++.+|.|.|.|.+.|. .. +
T Consensus 18 ~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~-----~r~~i~~~~~~-~~L~I~~v~~~D~G~Y~C~a~N~--~~-~ 86 (100)
T 2yuz_A 18 TVNLGKEICLKCEI--SENIPGKWTKNGLPVQES-----DRLKVVQKGRI-HKLVIANALTEDEGDYVFAPDAY--NV-T 86 (100)
T ss_dssp EEETTSCCCEEEEC--SSCCCEEEEETTEECCCC-----SSEEEEECSSE-EEEEESSCCGGGCSEEEEEESSS--CC-C
T ss_pred EEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC-----CcEEEEEeCCE-EEEEECCCChhhCEEEEEEEcCC--Ce-e
Confidence 46789999999999 788999999999987632 22223333333 23456888999999999999997 33 4
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 87 ~~a~L~V~~~P 97 (100)
T 2yuz_A 87 LPAKVHVISGP 97 (100)
T ss_dssp EEEEEEEECCS
T ss_pred EEEEEEEeCCC
Confidence 57788887765
No 19
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.53 E-value=1.1e-13 Score=73.05 Aligned_cols=78 Identities=26% Similarity=0.431 Sum_probs=55.3
Q ss_pred CEEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 1 MVVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
|.+.+|+.+.|.|.+.+ |.|.+.|+|+|..+... ........+... ...|..++..|.|.|.|.+.|.
T Consensus 6 v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~-----~~~~~~~~~~~~-~L~I~~~~~~D~G~Y~C~a~n~----- 73 (84)
T 2lu7_A 6 VRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ-----GRVQLEQAGARQ-VLRVQGARSGDAGEYLCDAPQD----- 73 (84)
T ss_dssp EEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC-----SSEEEEECSSCE-EEEESSCSSTTCEEEEEECTTT-----
T ss_pred EEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc-----ccEEEeecCCeE-EEEecCCCCcccEEEEEEECCE-----
Confidence 35778999999999866 88899999999988643 222233333322 2356888999999999988663
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 74 ~~~a~l~V~e 83 (84)
T 2lu7_A 74 SRIFLVSVEE 83 (84)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEEEC
Confidence 3456666643
No 20
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.53 E-value=4.8e-13 Score=72.10 Aligned_cols=81 Identities=26% Similarity=0.336 Sum_probs=59.0
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+. |.|.+.|+|++..+... .......... .....|..++..|.|.|.|.+.|..|..
T Consensus 12 ~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~- 84 (97)
T 2bk8_A 12 VGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS-----EKYEITYEDG-VAILYVKDITKLDDGTYRCKVVNDYGED- 84 (97)
T ss_dssp EECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS-----SSEEEEEETT-EEEEEECSCCGGGCEEEEEEEECSSCEE-
T ss_pred EEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC-----CCEEEEEcCC-eEEEEEecCChhhCeEEEEEEECCCCeE-
Confidence 46789999999999997 89999999999876532 1222211222 1233467779999999999999999887
Q ss_pred eeeEEEEEE
Q psy8666 81 SRNATLQVA 89 (124)
Q Consensus 81 ~~~~~l~v~ 89 (124)
...+.|.|.
T Consensus 85 ~~~~~l~V~ 93 (97)
T 2bk8_A 85 SSYAELFVK 93 (97)
T ss_dssp EEEEEEEET
T ss_pred eEEEEEEEE
Confidence 446666653
No 21
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=9.8e-15 Score=80.46 Aligned_cols=86 Identities=24% Similarity=0.499 Sum_probs=63.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... .......... .....|..++.+|.|.|.|.+.|..|.. +
T Consensus 20 ~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~----~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~ 93 (110)
T 2dm3_A 20 TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDS----AHKMLVRENG-VHSLIIEPVTSRDAGIYTCIATNRAGQN-S 93 (110)
T ss_dssp EEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCS----SEEEEECTTS-CEEEEESSCCGGGCSBBCEEEECSSCEE-E
T ss_pred EEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC----ceEEEEecCC-eEEEEEeeCCcccCEEEEEEEECCCCEE-E
Confidence 46789999999999999999999999987765321 1111111121 1223467779999999999999999886 6
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 94 ~~~~l~V~~~p~ 105 (110)
T 2dm3_A 94 FSLELVVAAKES 105 (110)
T ss_dssp ECCEEEEECCCC
T ss_pred EEEEEEEeCCCC
Confidence 678888877654
No 22
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.53 E-value=2.5e-13 Score=73.32 Aligned_cols=83 Identities=22% Similarity=0.450 Sum_probs=60.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... ............ ....|..++..|.|.|.|.+.|..|.. +
T Consensus 16 ~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~---~~~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~ 90 (100)
T 3irg_A 16 SIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE---QGRFHIENTDDL-TTLIIMDVQKQDGGLYTLSLGNEFGSD-S 90 (100)
T ss_dssp EEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG---GGTEEEEECSSE-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCC---CCEEEEEecCCE-EEEEEeecCcccCEEEEEEEEeCCCcE-E
Confidence 46789999999999999999999999998775211 122222222222 233567789999999999999999886 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 91 ~~~~l~V~ 98 (100)
T 3irg_A 91 ATVNIHIR 98 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 66666664
No 23
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=1.9e-14 Score=82.83 Aligned_cols=81 Identities=28% Similarity=0.436 Sum_probs=57.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCE----------------------------EeeccCCCCCceEEEccCCcEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGE----------------------------LVETSKSDAKSQRVILPTGSLFF 53 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~----------------------------~~~~~~~~~~~~~~~~~~~~~~~ 53 (124)
.+..|+.+.|.|.+.|.|.|.+.|+|++. .+.. ............ ..
T Consensus 29 ~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~r~~i~~~~~-~s 103 (139)
T 1gxe_A 29 VVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCE----TEGRVRVETTKD-RS 103 (139)
T ss_dssp EESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCS----CSSSCEEEEETT-EE
T ss_pred EEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecC----CCCeEEEEeCCC-EE
Confidence 56789999999999999999999999882 2210 011111112222 22
Q ss_pred EEEEcCCCccCCeEEEEEeEeCCccceeeeEEEEE
Q psy8666 54 LRVVHGKKEQDGGVYWCLARNSVGTAVSRNATLQV 88 (124)
Q Consensus 54 ~~~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v 88 (124)
...|..++..|.|.|.|.+.|..|.. ...+.|.|
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~-~~~~~L~V 137 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGED-QVNLTVKV 137 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEE-EEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCceE-EEEEEEEE
Confidence 34567889999999999999999987 55666665
No 24
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=6e-13 Score=75.16 Aligned_cols=91 Identities=22% Similarity=0.218 Sum_probs=60.6
Q ss_pred CEEecCCCEEEEEeeecc---CCCeEEEEeCCEEeeccCCCCCceEE--Ecc-CCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 1 MVVAKNEPVTLNCKAEGK---PEPTIEWYKDGELVETSKSDAKSQRV--ILP-TGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~---p~p~v~w~k~g~~~~~~~~~~~~~~~--~~~-~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
+.+.+|+.+.|.|.+.+. |.|.+.|||++............... ... .........|.++...|.|.|.|.+.|
T Consensus 17 v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn 96 (126)
T 2dav_A 17 GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTY 96 (126)
T ss_dssp CEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEEC
T ss_pred eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEe
Confidence 457899999999998764 89999999974211000000001111 111 111224445688899999999999999
Q ss_pred CCccceeeeEEEEEEeee
Q psy8666 75 SVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~~ 92 (124)
..+.. ++.+.|.|...|
T Consensus 97 ~~g~~-~~~~~L~V~~~~ 113 (126)
T 2dav_A 97 KDKFD-SCSFDLEVHEST 113 (126)
T ss_dssp SSCEE-EECCEEEEECCC
T ss_pred CCCcE-EEEEEEEEEecC
Confidence 98887 778999998833
No 25
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.52 E-value=6.1e-14 Score=76.94 Aligned_cols=83 Identities=24% Similarity=0.441 Sum_probs=53.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... ..........+ .|..++.+|.|.|.|.+.|..|.. .
T Consensus 21 ~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~----~~~~~~~~~~L----~i~~v~~~D~G~Y~C~a~n~~g~~-~ 91 (108)
T 3kvq_A 21 TTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS----GIVLKDGNRNL----TIRRVRKEDEGLYTCQACSVLGCA-K 91 (108)
T ss_dssp EEETTCCEEEECBCC----CCEEEEESSSBCCCBT----TEEEETTTTEE----EECSCCGGGCEEEEEEEC----CE-E
T ss_pred EEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCC----CeEEeCCCcEE----EEeecCcccCEEEEEEEEeCCCce-E
Confidence 46789999999999999999999999987765321 11122223333 356669999999999999999887 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..++.
T Consensus 92 ~~~~l~V~~~~~ 103 (108)
T 3kvq_A 92 VEAFFIIEGAQE 103 (108)
T ss_dssp EEEEEEEEC---
T ss_pred EEEEEEEeCCCc
Confidence 678888877654
No 26
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.51 E-value=1.7e-13 Score=77.35 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=59.8
Q ss_pred CCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEcc---CC-cEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 6 NEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILP---TG-SLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 6 G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~---~~-~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..+.|.|.+.|.|.|.++|+|+|..+....+ ....... .. .......|..+...|.|.|.|.|.|..|.. .
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~---~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~-~ 90 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSF---IFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA-S 90 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEETTEECCCCSS---EEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEE-E
T ss_pred CccEEEEEEEeeeCCCeEEEEECCEECCCCCc---eeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeE-E
Confidence 45688999999999999999999998874311 1111111 11 112234456778999999999999999988 6
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|...|.
T Consensus 91 ~t~~l~v~~~P~ 102 (126)
T 1he7_A 91 ASIMAAFMDNPF 102 (126)
T ss_dssp EEEEECCCSCTT
T ss_pred EEEEEEEEcCCC
Confidence 677787776664
No 27
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.51 E-value=2.8e-13 Score=75.92 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=62.0
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCCEEeeccC--CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDGELVETSK--SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
.+..|+.+.|.|.+.+. |.+.+.|++++..+.... ....................|.+++.+|.|.|.|.+.|..|
T Consensus 19 ~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 98 (122)
T 3s35_X 19 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 98 (122)
T ss_dssp EEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCC
Confidence 56789999999999884 456789999886432100 00000111100001223345678899999999999999998
Q ss_pred cceeeeEEEEEEeeeeeeee
Q psy8666 78 TAVSRNATLQVAVVIFFISF 97 (124)
Q Consensus 78 ~~~~~~~~l~v~~~~~~~~~ 97 (124)
.. ...+.|.|..+|.+...
T Consensus 99 ~~-~~~~~l~V~~~p~i~~~ 117 (122)
T 3s35_X 99 TK-KNSTFVRVHEKPFVAFG 117 (122)
T ss_dssp EE-EEEEEEEEEEEECC---
T ss_pred ce-EEEEEEEEeccCeEEee
Confidence 87 56888999888876543
No 28
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=4.5e-14 Score=78.82 Aligned_cols=83 Identities=37% Similarity=0.524 Sum_probs=62.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... .........+.+. |..++.+|.|.|.|.+.|..|.. .
T Consensus 19 ~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~----~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~a~n~~g~~-~ 89 (118)
T 2eo9_A 19 TVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQ----DSRIKQLENGVLQ----IRYAKLGDTGRYTCIASTPSGEA-T 89 (118)
T ss_dssp EEETTCEEEEECBCCCSSCCEEEEEESSSBCCTT----STTEEEEETTEEE----EESCCGGGCCCEEEEEECSSCEE-E
T ss_pred EEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC----CCeEEEccCCEEE----EccCCcCCCEEEEEEEEcCCCcE-E
Confidence 4678999999999999999999999998876531 1222233444443 45569999999999999999886 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..++.
T Consensus 90 ~~~~l~V~~~~~ 101 (118)
T 2eo9_A 90 WSAYIEVQEFGV 101 (118)
T ss_dssp EECCEEEECCSC
T ss_pred EEEEEEEEeCCC
Confidence 567788776653
No 29
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=3.5e-13 Score=72.92 Aligned_cols=81 Identities=27% Similarity=0.489 Sum_probs=58.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+....... ..........+ .|..++..|.|.|.|.+.|..|.. .
T Consensus 19 ~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L----~i~~v~~~D~G~Y~C~a~N~~g~~-~ 92 (100)
T 3caf_A 19 AVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG-GYKVRNQHWSL----IMESVVPSDKGNYTCVVENEYGSI-N 92 (100)
T ss_dssp EECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTT-CCEEEGGGTEE----EECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EecCCCEEEEEEEccccCCCEEEEEECCEEcccccccc-cEEEecCeEEE----EEccCCcCCCEEEEEEEEeCCCEE-E
Confidence 46689999999999999999999999998876432111 11112222233 356679999999999999999886 4
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 93 ~~~~l~V 99 (100)
T 3caf_A 93 HTYHLDV 99 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 30
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.49 E-value=1.1e-13 Score=73.92 Aligned_cols=74 Identities=20% Similarity=0.431 Sum_probs=57.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ....+ .|..++.+|.|.|.|.+.|..|...+
T Consensus 14 ~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----------~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~~s 78 (91)
T 3bfo_A 14 KLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----------TKKLY----MVPYVDLEHQGTYWCHVYNDRDSQDS 78 (91)
T ss_dssp EECTTSCEEEECEEECSSCCEEEEEETTEECTTC-----------CSSEE----EESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred EecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-----------CCCeE----EECCCCHHhCEEEEEEEEcCCCCEEe
Confidence 4678999999999999999999999999876532 11222 35667999999999999999987655
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 79 ~~~~l~V~~ 87 (91)
T 3bfo_A 79 KKVEIIIDE 87 (91)
T ss_dssp CCEEEEEC-
T ss_pred eeEEEEEeh
Confidence 667777643
No 31
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.48 E-value=2.4e-12 Score=70.74 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=57.7
Q ss_pred EEecCCCEEEEEeeeccCC---CeEEEEeCCEEeeccCCCCCceEE---EccCCcEEEEEEEcCCCccCCeEEEEEeEeC
Q psy8666 2 VVAKNEPVTLNCKAEGKPE---PTIEWYKDGELVETSKSDAKSQRV---ILPTGSLFFLRVVHGKKEQDGGVYWCLARNS 75 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~---p~v~w~k~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~ 75 (124)
.+..|+.+.|.|.+.+.|. |.+.|+|++............... ............|.+++..|.|.|.|.+.|.
T Consensus 15 ~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 94 (108)
T 3cx2_A 15 EVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTK 94 (108)
T ss_dssp EEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecC
Confidence 4778999999999999988 999999987322111000001110 0111112334567888999999999999999
Q ss_pred CccceeeeEEEEEE
Q psy8666 76 VGTAVSRNATLQVA 89 (124)
Q Consensus 76 ~~~~~~~~~~l~v~ 89 (124)
.|.. +..+.|.|.
T Consensus 95 ~G~~-~~~~~L~V~ 107 (108)
T 3cx2_A 95 DKFD-CSNFNLTVH 107 (108)
T ss_dssp SCEE-EEEEEEEEE
T ss_pred CCce-EEEEEEEEe
Confidence 9987 567777764
No 32
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=5.1e-14 Score=76.19 Aligned_cols=77 Identities=27% Similarity=0.517 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ..... .. .....|..++..|.|.|.|.+.|..|.. +
T Consensus 22 ~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~~~--~~--~~~L~i~~v~~~D~G~Y~C~a~N~~g~~-~ 91 (99)
T 2yr3_A 22 AVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA-----RSTCE--AG--VAELHIQDALPEDHGTYTCLAENALGQV-S 91 (99)
T ss_dssp EECTTCCEEEECEEEEESCCCCEEEESSSBCSSC-----CCEEE--TT--EEEEEECSCCTTCCBCEEEEEECSSCEE-E
T ss_pred EEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc-----ceEee--CC--eEEEEECCCChhhCEEEEEEEEECCCeE-E
Confidence 4678999999999999999999999998776532 11111 11 1223457779999999999999999876 4
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 92 ~~~~l~V 98 (99)
T 2yr3_A 92 CSAWVTV 98 (99)
T ss_dssp EECCEEE
T ss_pred EEEEEEE
Confidence 4555554
No 33
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.47 E-value=1.9e-13 Score=73.52 Aligned_cols=75 Identities=20% Similarity=0.459 Sum_probs=55.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.| |.+.|+|++..+... .... .....+ .|..++..|.|.|.|.+.|..|.. .
T Consensus 20 ~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~-----~~~~-~~~~~L----~i~~~~~~D~G~Y~C~a~n~~g~~-~ 87 (95)
T 2ckn_A 20 LVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES-----NRTR-ITGEEV----EVRDSIPADSGLYACVTSSPSGSD-T 87 (95)
T ss_dssp EECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC-----SSEE-ECSSEE----EESSCCGGGSEEEEEEEEETTEEE-E
T ss_pred EEcCCCeEEEEEECCCCC-CceEEEECCEecCCC-----CCEE-EeCCEE----EECCCChHHCEEEEEEeccCCCcE-E
Confidence 467899999999999887 899999999876532 1222 223333 456779999999999999998876 4
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 88 ~~~~l~V 94 (95)
T 2ckn_A 88 TYFSVNV 94 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 34
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.45 E-value=1.5e-13 Score=75.51 Aligned_cols=81 Identities=25% Similarity=0.470 Sum_probs=59.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ........... ....|..++..|.|.|.|.+.|..|.. +
T Consensus 25 ~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~N~~G~~-~ 97 (106)
T 1nct_A 25 TVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS-----ARHQVTTTKYK-STFEISSVQASDEGNYSVVVENSEGKQ-E 97 (106)
T ss_dssp EESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC-----SSEEEEECSSE-EEEEECCCCSSCCSEEEECCBCSSCBC-C
T ss_pred EEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-----CCEEEEECCCE-EEEEECcCCchhCEEEEEEEEeCCCeE-E
Confidence 4678999999999999999999999998765432 12222222222 233457779999999999999999886 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 98 ~~~~l~V~ 105 (106)
T 1nct_A 98 AEFTLTIQ 105 (106)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 56666653
No 35
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.7e-12 Score=72.52 Aligned_cols=90 Identities=21% Similarity=0.180 Sum_probs=60.2
Q ss_pred CEEecCCCEEEEEeeecc---CCCeEEEEeCCEEeeccCCCCCceEEEc-cC--CcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 1 MVVAKNEPVTLNCKAEGK---PEPTIEWYKDGELVETSKSDAKSQRVIL-PT--GSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~---p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~--~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
+.+.+|+.+.|.|.+.+. |.|.|.|||++................. .. ........|.++...|.|.|.|.+.|
T Consensus 22 v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn 101 (118)
T 2edn_A 22 VSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKA 101 (118)
T ss_dssp CEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEEC
T ss_pred eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEE
Confidence 467899999999999875 7899999997421111000001111111 11 11234456788899999999999999
Q ss_pred CCccceeeeEEEEEEee
Q psy8666 75 SVGTAVSRNATLQVAVV 91 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~ 91 (124)
..|.. ++.+.|.|..+
T Consensus 102 ~~g~~-s~~~~L~V~~~ 117 (118)
T 2edn_A 102 KDTCD-SCGFNIDVEAP 117 (118)
T ss_dssp SSCEE-EEEECCEEECC
T ss_pred cCCcE-EEEEEEEEEcC
Confidence 99976 78888888763
No 36
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=5.7e-13 Score=71.31 Aligned_cols=65 Identities=31% Similarity=0.562 Sum_probs=47.6
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeC
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNS 75 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~ 75 (124)
..|+.+.|.|.+.+ |.|.+.|+|+|..+... ........+... ...|.+++.+|.|.|.|.+.|.
T Consensus 19 ~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~-----~~~~i~~~~~~~-~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 19 ITSECVMLACEVDR-EDAPVRWYKDGQEVEES-----DFVVLENEGPHR-RLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp CTTCCEEEEEECSC-TTSCCEEEETTSCCCCC-----SSCEEEEETTEE-EEEESSCCGGGCSEEEEECSSC
T ss_pred ECCCcEEEEEEECC-CCcEEEEEECCEEeeee-----eeeeEEecCCeE-EEEeCCCChhhcEEEEEEEcce
Confidence 47999999999865 88899999999887643 122223333332 3456888999999999998774
No 37
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.42 E-value=3.4e-12 Score=68.47 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=53.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+ +.|.+.|+|+|..+... ........+.. ....|.+++.+|.|.|.|.+.|..
T Consensus 16 ~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~-----~~~~i~~~g~~-~~L~I~~v~~~D~G~Y~C~a~n~~----- 83 (93)
T 1waa_A 16 EVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS-----PDCEIIEDGKK-HILILHNCQLGMTGEVSFQAANTK----- 83 (93)
T ss_dssp EEETTSCEEEEEEESS-SSCCCEEEETTEECCCB-----TTEEEEEETTE-EEEEECSCCGGGCEEEEEEETTEE-----
T ss_pred EEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC-----CCEEEEEECCE-EEEEECCCChhhCEEEEEEECCCc-----
Confidence 4678999999999976 55789999999987642 12222233332 234567889999999999998742
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
....|.|.
T Consensus 84 ~sa~L~V~ 91 (93)
T 1waa_A 84 SAANLKVK 91 (93)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 34555554
No 38
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.42 E-value=4.4e-12 Score=76.74 Aligned_cols=82 Identities=20% Similarity=0.458 Sum_probs=61.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ...... ..+.. ....|..++..|.|.|.|.+.|..|..
T Consensus 128 ~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-----~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~N~~g~~- 200 (212)
T 2r15_A 128 TIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT-----DHCNLKFEAGRT-AYFTINGVSTADSGKYGLVVKNKYGSE- 200 (212)
T ss_dssp EEETTCCEEEEEEEECSSCCEEEEEETTEEECCC-----SSEEEEEETTTE-EEEEESSCCGGGCEEEEEEEEETTEEE-
T ss_pred EEccCCeEEEEEEEcCCCCceEEEEECCeECccC-----CCEEEEEcCCCE-EEEEEcCcchHHCeEEEEEEEcCCCcE-
Confidence 3567999999999999999999999999887642 111122 21222 334567789999999999999999887
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
...+.|.|..
T Consensus 201 ~~~~~l~V~~ 210 (212)
T 2r15_A 201 TSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEc
Confidence 5677777654
No 39
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.42 E-value=1e-12 Score=70.55 Aligned_cols=78 Identities=27% Similarity=0.467 Sum_probs=57.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+ .|.+.|+|+|..+... ... ......+ .|..++.+|.|.|.|.+.|..|.. +
T Consensus 12 ~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~-----~~~-~~~~~~L----~i~~~~~~D~G~Y~C~a~n~~g~~-~ 78 (95)
T 4hwu_A 12 VVAPGESLELQCMLKD--AAVISWTKDGVHLGPN-----NRT-VLIGEYL----QIKGATPRDSGLYACTAARTVDSE-T 78 (95)
T ss_dssp EECTTSCEEEECCCCT--TCEEEEEETTEEECCC-----SSE-EEETTEE----EECSCCGGGCEEEEEEEECSSCEE-E
T ss_pred EECCCCEEEEEEEeCC--CCEEEEEECCEECCCC-----ceE-EEeCCEE----EECcCCcccCEEEEEEEccCCCcE-E
Confidence 4678999999999876 5799999999887532 111 1223333 356679999999999999999876 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..++
T Consensus 79 ~~~~l~V~~~~ 89 (95)
T 4hwu_A 79 WIFMVNVTDAA 89 (95)
T ss_dssp EEEEEEECCC-
T ss_pred EEEEEEEeCCc
Confidence 67777776554
No 40
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=71.56 Aligned_cols=80 Identities=26% Similarity=0.330 Sum_probs=57.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.| +.|+|++..+... ........+.. ....|..++.+|.|.|.|.+.|..
T Consensus 21 ~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~-----~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~a~n~~----- 88 (104)
T 2e6p_A 21 TFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES-----ELLVVKMDGRK-HRLILPEAKVQDSGEFECRTEGVS----- 88 (104)
T ss_dssp EEESSSCEECCEECSSTTCC-CEEEETTEECCCB-----TTBEEEEETTE-EEEEESSCCTTTCEEEEEECSSCC-----
T ss_pred EEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC-----CCEEEEeCCCE-EEEEECCCChhhCEEEEEEECCce-----
Confidence 46789999999999998988 9999999877632 11122222222 233567889999999999998863
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 89 ~~~~l~V~~~P~ 100 (104)
T 2e6p_A 89 AFFGVTVQDPSG 100 (104)
T ss_dssp CCEEEEEECCCC
T ss_pred EEEEEEEcCCCC
Confidence 256777777664
No 41
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.42 E-value=1.2e-11 Score=73.33 Aligned_cols=92 Identities=32% Similarity=0.534 Sum_probs=67.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEE-EccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRV-ILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|++..+... .... ............|..++..|.|.|.|.+.+..+...
T Consensus 13 ~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 87 (182)
T 1rhf_A 13 TVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-----DQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEI 87 (182)
T ss_dssp EEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-----EEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEE
T ss_pred EEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-----CceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEE
Confidence 4678999999999999899999999999877632 1111 112222223345678899999999999999877655
Q ss_pred eeeEEEEEEeeeeeeeec
Q psy8666 81 SRNATLQVAVVIFFISFF 98 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~~~~ 98 (124)
+..+.|.|..+|.+...+
T Consensus 88 ~~~~~l~V~~~p~~~~~~ 105 (182)
T 1rhf_A 88 SQPVWLTVEGVPFFTVEP 105 (182)
T ss_dssp CCCEEEEEECSCEEEECC
T ss_pred EEEEEEEEecCCeEEecC
Confidence 678888888877665443
No 42
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.42 E-value=3.6e-12 Score=69.64 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=58.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCE-EeeccC--CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGE-LVETSK--SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~-~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.+.|.+.+.|++++. .+.... .....+..............|.+++.+|.|.|.|.+.| .+.
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~ 95 (108)
T 3m45_A 17 TVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPV 95 (108)
T ss_dssp EEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSC
T ss_pred EEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCC
Confidence 56789999999999998999999999875 222110 00111221111111123345678899999999999999 665
Q ss_pred ceeeeEEEEEEeee
Q psy8666 79 AVSRNATLQVAVVI 92 (124)
Q Consensus 79 ~~~~~~~l~v~~~~ 92 (124)
. +..+.|.|..+|
T Consensus 96 ~-~~~~~L~V~~~P 108 (108)
T 3m45_A 96 K-TSKAYLTVLGVP 108 (108)
T ss_dssp E-EEEEEEEEECCC
T ss_pred c-EEEEEEEEEcCC
Confidence 5 567777776553
No 43
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.42 E-value=7.7e-13 Score=71.39 Aligned_cols=75 Identities=27% Similarity=0.375 Sum_probs=54.5
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+. +.|.|.+.|+|++...... . .....+.+ .|.+++.+|.|.|.|.+.|..|..
T Consensus 21 ~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~------~-~~~~~~~L----~i~~v~~~D~G~Y~C~a~n~~g~~- 88 (98)
T 1gl4_B 21 SVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS------R-AMDFNGIL----TIRNVQPSDAGTYVCTGSNMFAMD- 88 (98)
T ss_dssp EECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT------T-EEEETTEE----EECSCCGGGCEEEEEEEECSSCEE-
T ss_pred EEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc------e-eecCCCEE----EEeCCChhhCEEEEEEecCCCCcc-
Confidence 467899999999998 6899999999975433211 1 12223333 456779999999999999998876
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
...+.|.|
T Consensus 89 ~~~~~l~V 96 (98)
T 1gl4_B 89 QGTATLHV 96 (98)
T ss_dssp EEEEEEEE
T ss_pred ccEEEEEE
Confidence 45666665
No 44
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=2.2e-13 Score=73.80 Aligned_cols=78 Identities=21% Similarity=0.451 Sum_probs=56.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.| |.+.|+|++..+... ..... ....+ .|..++..|.|.|.|.+.|..|.. .
T Consensus 14 ~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~-----~~~~~-~~~~L----~i~~v~~~D~G~Y~C~a~n~~g~~-~ 81 (99)
T 2cr3_A 14 LVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAES-----NRTRI-TGEEV----EVQDSVPADSGLYACVTSSPSGSD-T 81 (99)
T ss_dssp CBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCC-----SSEEE-CSSEE----EETTCCTTTCEEEEEEEEETTEEE-E
T ss_pred EEeCCCcEEEEEEecCCC-CeEEEEECCEECCCC-----CcEEE-ECCEE----EEccCCHHHCEEEEEEEEeCCceE-E
Confidence 467899999999998876 799999999766432 12222 22322 457779999999999999998876 5
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
..+.|.|...
T Consensus 82 ~~~~l~V~~~ 91 (99)
T 2cr3_A 82 TYFSVNVSDA 91 (99)
T ss_dssp EEEEECBCSC
T ss_pred EEEEEEEecC
Confidence 5666665543
No 45
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.41 E-value=7.4e-12 Score=76.08 Aligned_cols=89 Identities=34% Similarity=0.489 Sum_probs=61.5
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+...... ........... ....|..++..|.|.|.|.+.|..|...+.
T Consensus 120 ~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~--~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~ 196 (212)
T 2yd6_A 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNN--GRIKQLRSESI-GALQIEQSEESDQGKYECVATNSAGTRYSA 196 (212)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEEC--------CCEEEEEETTE-EEEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred EecCCCEEEEEEecCCCCCeEEEEECCccccCcCCC--ceEEEEecCCe-EEEEEcCCCcccCEEEEEEEECCCCccccc
Confidence 557999999999999999999999999887642110 11111111111 233457779999999999999999998788
Q ss_pred eEEEEEEeeeee
Q psy8666 83 NATLQVAVVIFF 94 (124)
Q Consensus 83 ~~~l~v~~~~~~ 94 (124)
.+.|.+..++++
T Consensus 197 ~a~l~~~~~~~~ 208 (212)
T 2yd6_A 197 PANLYVRGTKHH 208 (212)
T ss_dssp CEEEEEEC----
T ss_pred cccEEEEecccc
Confidence 889998877653
No 46
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.41 E-value=1.4e-12 Score=77.89 Aligned_cols=82 Identities=33% Similarity=0.648 Sum_probs=62.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+... ........+.+ .|..++..|.|.|.|.+.|..|...+
T Consensus 111 ~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~g~~~s 181 (192)
T 2iep_A 111 KIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN-----SRIAVLESGSL----RIHNVQKEDAGQYRCVAKNSLGTAYS 181 (192)
T ss_dssp EEETTSCEEECCEEEEESCCEEEEEETTEECCCC-----SSEEECTTSCE----EESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred EEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC-----CcEEEecCCcE----EEecCChhhCEEEEEEEEcCCCcEEE
Confidence 3567999999999999999999999999877632 22233344444 35666899999999999999988766
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 182 ~~~~l~V~~pp 192 (192)
T 2iep_A 182 KLVKLEVEVFA 192 (192)
T ss_dssp CCEEEEEEC--
T ss_pred EEEEEEEEeCC
Confidence 67888887654
No 47
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.41 E-value=1.4e-11 Score=80.84 Aligned_cols=94 Identities=26% Similarity=0.354 Sum_probs=67.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+|+ |..+.........+......... ....|.+++.+|.|.|.|.+.|..|..
T Consensus 11 ~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 89 (389)
T 2jll_A 11 TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGS-SSLHIKDVKLSDSGRYDCEAASRIGGH 89 (389)
T ss_dssp EEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSE-EEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred EEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCc-ceEEEcccChhhCEEEEEEEEeCCCCc
Confidence 356799999999999999999999999 87775321111122222222121 223456779999999999999999887
Q ss_pred eeeeEEEEEEeeeeeeee
Q psy8666 80 VSRNATLQVAVVIFFISF 97 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~ 97 (124)
+..+.|.|..+|.+...
T Consensus 90 -~~~~~l~V~~~P~~~~~ 106 (389)
T 2jll_A 90 -QKSMYLDIEYAPKFISN 106 (389)
T ss_dssp -EEEEEEEEEEEEEECCS
T ss_pred -ceEEEEEEEeCCEEecC
Confidence 67889999888876543
No 48
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.40 E-value=9.5e-13 Score=79.62 Aligned_cols=87 Identities=34% Similarity=0.645 Sum_probs=61.8
Q ss_pred EEecCCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+ .+.|.|.+.|++++..+.... .......+.+ .|..++.+|.|.|.|.+.|..|...
T Consensus 122 ~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~-----~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~N~~g~~~ 192 (212)
T 2v9r_A 122 MVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD-----ERITIRGGKL----MITYTRKSDAGKYVCVGTNMVGERE 192 (212)
T ss_dssp EEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS-----TTEEEETTEE----EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc-----ceEEccCCeE----EEeeCCHhhCeeEEEEEecccCcee
Confidence 35689999999998 889999999999999876421 1112233333 3566689999999999999998875
Q ss_pred eeeEEEEEEeeeeeeee
Q psy8666 81 SRNATLQVAVVIFFISF 97 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~~~ 97 (124)
+..+.|.|..+|.+...
T Consensus 193 s~~~~l~V~~~P~~~~~ 209 (212)
T 2v9r_A 193 SEVAELTVLERPSFVKA 209 (212)
T ss_dssp CCCEEEEEEC-------
T ss_pred cceEEEEEEeCchHhhh
Confidence 65689999888765543
No 49
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=7.5e-12 Score=69.09 Aligned_cols=82 Identities=26% Similarity=0.364 Sum_probs=58.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+. .|.+.+.|+|+|..+... ........+... ...|..++.+|.|.|.|.+.| . +
T Consensus 24 ~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-----~~~~~~~~~~~~-~L~I~~v~~~D~G~Y~C~a~n----~-~ 91 (113)
T 2cpc_A 24 AAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES-----PALLLQKEDTVR-RLVLPAVQLEDSGEYLCEIDD----E-S 91 (113)
T ss_dssp EEETTCCEEEEEEES-CTTCCCEEEETTEECCCB-----TTBEEEECSSEE-EEEESSCCTTTCEEEEEESSS----C-E
T ss_pred EEEcCCeEEEEEEec-CCCCeEEEEECCEECccC-----CCEEEEECCCEE-EEEECCCCcccCEEEEEEEec----C-c
Confidence 356799999999985 788999999999877642 122222333222 334678899999999999988 2 4
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
..+.|.|..+|.+.
T Consensus 92 ~~~~l~V~~~p~~~ 105 (113)
T 2cpc_A 92 ASFTVTVTEPPVRI 105 (113)
T ss_dssp EEEEEEEECCCCCC
T ss_pred EEEEEEEecCCchh
Confidence 57788888777543
No 50
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.40 E-value=3.9e-12 Score=77.38 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=63.1
Q ss_pred CEEecCCCEEEEEe---eeccCCCeEEEEeCCEEeeccC-----C-------CCCceEEEccCCcEEEEEEEcCCCccCC
Q psy8666 1 MVVAKNEPVTLNCK---AEGKPEPTIEWYKDGELVETSK-----S-------DAKSQRVILPTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 1 v~~~~G~~~~l~C~---~~~~p~p~v~w~k~g~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~ 65 (124)
|++..|+.+.|.|. +.+.|.|.+.|+|+|....... . ............. .....|..++.+|.
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSAN-TFFLVVTAANISHD 81 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETT-EEEEEESSCCGGGC
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCC-EEEEEEccCCHHHC
Confidence 57889999999995 5677899999999764221100 0 0000001111111 22345688899999
Q ss_pred eEEEEEeEeCCccceeeeEEEEEEeeeeeeee
Q psy8666 66 GVYWCLARNSVGTAVSRNATLQVAVVIFFISF 97 (124)
Q Consensus 66 g~y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~ 97 (124)
|.|.|.+.|..|.. +..+.|.|..+|.+...
T Consensus 82 G~Y~C~a~n~~g~~-~~~~~l~V~~p~~~~~~ 112 (203)
T 4fa8_A 82 GNYLCRMKLGETEV-TKQEHLSVVKPLTLSVH 112 (203)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCcE-EEEEEEEecCCceeeec
Confidence 99999999998887 56788888887766544
No 51
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.39 E-value=2.8e-12 Score=78.11 Aligned_cols=89 Identities=29% Similarity=0.348 Sum_probs=64.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|+|..+.... ............ ....|..++..|.|.|.|.+.|..|.. .
T Consensus 29 ~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~---~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~ 103 (215)
T 3mtr_A 29 YTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN---YSNIKIYNTPSA-SYLEVTPDSENDFGNYNCTAVNRIGQE-S 103 (215)
T ss_dssp EECTTCCEEEEEEEEEESCCEEEEEETTEESSCSS---SCSEEEEEETTE-EEEEECCCSGGGCEEEEEEEECSSCEE-E
T ss_pred EEECCCCEEEEEEEeecCCCEEEEEECCeECCCCC---CccEEEecCCCe-eEEEEecCChhhCeEEEEEEEECCCce-E
Confidence 46689999999999999999999999998776321 011112211111 223457779999999999999999987 5
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
..+.|.+..+|..+
T Consensus 104 ~~~~l~v~~~P~~p 117 (215)
T 3mtr_A 104 LEFILVQADTPSSP 117 (215)
T ss_dssp EEEEEEECCCCCCC
T ss_pred EEEEEEECCCCCCC
Confidence 67788877665543
No 52
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.39 E-value=4.9e-12 Score=77.09 Aligned_cols=77 Identities=21% Similarity=0.349 Sum_probs=57.6
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+. |.|.+.|+|+|..+.... .. ..........|..++.+|.|.|.|.+.|..|..
T Consensus 127 ~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~-----~~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~- 197 (207)
T 3rbs_A 127 EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-----KH---DFKDGICTLLITEFSKKDAGIYEVILKDDRGKD- 197 (207)
T ss_dssp EEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC-----CC---CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEE-
T ss_pred EEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC-----ce---EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEE-
Confidence 35679999999999998 999999999999886421 11 111222334568889999999999999999987
Q ss_pred eeeEEEE
Q psy8666 81 SRNATLQ 87 (124)
Q Consensus 81 ~~~~~l~ 87 (124)
...+.|.
T Consensus 198 ~~~~~L~ 204 (207)
T 3rbs_A 198 KSRLKLV 204 (207)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 4455554
No 53
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.38 E-value=9.4e-12 Score=74.14 Aligned_cols=86 Identities=34% Similarity=0.667 Sum_probs=63.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....... ...+ .|..++..|.|.|.|.+.+..+..
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~~~~~~~~~- 84 (192)
T 2va4_A 15 TAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-----EKYILKGSNTEL----TVRNIINSDGGPYVCRATNKAGED- 84 (192)
T ss_dssp ETTSCCCEEEECEEECSSCCEEEEEETTEECCCS-----SSEEEETTTTEE----EECSCCGGGCEEEEEEEEETTEEE-
T ss_pred EEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC-----ccEEEeCCeeEE----EEecCChhcCcEEEEEEEcccccc-
Confidence 3557999999999999999999999999877642 1222222 2223 356669999999999999988776
Q ss_pred eeeEEEEEEeeeeeeee
Q psy8666 81 SRNATLQVAVVIFFISF 97 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~~~ 97 (124)
...+.|.|..+|.+...
T Consensus 85 ~~~~~l~V~~~p~~~~~ 101 (192)
T 2va4_A 85 EKQAFLQVFVQPHIIQL 101 (192)
T ss_dssp EEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEccCccccc
Confidence 46777888777765443
No 54
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.38 E-value=1.9e-11 Score=73.17 Aligned_cols=88 Identities=27% Similarity=0.427 Sum_probs=64.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... ..... ...+.. ....|..++..|.|.|.|.+.|..+..
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~n~~g~~- 88 (197)
T 2j8h_A 15 NVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG----LKYRIQEFKGGY-HQLIIASVTDDDATVYQVRATNQGGSV- 88 (197)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEEETTEECCCCS----SSEEEEEETTTE-EEEEECSCCGGGCSEEEEEEEETTEEE-
T ss_pred EEcCCCEEEEEEEEeecCCCEEEEEECCEECccCC----CcEEEEEcCCCE-EEEEECcCCHHhCEEEEEEEEECCCce-
Confidence 46789999999999999999999999998776321 11111 112221 233467779999999999999998876
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
+..+.|.|..+|.+.
T Consensus 89 ~~~~~l~V~~~p~~~ 103 (197)
T 2j8h_A 89 SGTASLEVEVPAKIH 103 (197)
T ss_dssp EEEEEEEEEEEEEEC
T ss_pred eEEEEEEEcCCCcCC
Confidence 667888888776553
No 55
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=4.1e-12 Score=69.15 Aligned_cols=82 Identities=21% Similarity=0.380 Sum_probs=55.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+ |.+.+.|+|++..+..... .++.....+... ...|..++.+|.|.|.|.+.| . +
T Consensus 18 ~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~---~~~~~~~~~~~~-~L~I~~~~~~D~G~Y~C~a~n----~-~ 87 (103)
T 1x44_A 18 TAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPK---SRYRIRVEGKKH-ILIIEGATKADAAEYSVMTTG----G-Q 87 (103)
T ss_dssp EEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTT---CSEEEEEETTEE-EEEEEEECTTTCSEEEEEETT----E-E
T ss_pred EEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCc---eEEEEEEcCCEE-EEEECCCCcccCEEEEEEECC----C-c
Confidence 4678999999999977 7799999999988764310 121222222211 123345599999999999987 2 4
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 88 ~~~~l~V~~~p~ 99 (103)
T 1x44_A 88 SSAKLSVDLKSG 99 (103)
T ss_dssp EEEEEEEECCCS
T ss_pred EEEEEEEeCCCC
Confidence 567788877654
No 56
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.36 E-value=4.4e-11 Score=71.39 Aligned_cols=87 Identities=28% Similarity=0.506 Sum_probs=63.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|++..+... ........+... ...|..++..|.|.|.|.+.|..+.. .
T Consensus 18 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~~~n~~~~~-~ 90 (197)
T 3lcy_A 18 TTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS-----RKYKMSSDGRTH-TLTVMTEEQEDEGVYTCIATNEVGEV-E 90 (197)
T ss_dssp EEETTSEEEEEEEEEEESCCEEEEEETTEEECCC-----SSEEEEESSSEE-EEEEECCSGGGCEEEEEEEECSSCEE-E
T ss_pred EEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC-----ccEEEEeCCCEE-EEEEecCCccCCEEEEEEEECCCCce-e
Confidence 4678999999999999999999999999887532 222223333222 23346669999999999999988776 5
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
....|.|...|.+.
T Consensus 91 ~~~~l~v~~~p~~~ 104 (197)
T 3lcy_A 91 TSSKLLLQATPQFH 104 (197)
T ss_dssp EEEEEEEEEEEEEC
T ss_pred EEEEEEEEcCCCCC
Confidence 56777777766544
No 57
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=2.3e-12 Score=70.06 Aligned_cols=80 Identities=26% Similarity=0.440 Sum_probs=57.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+ |.+.+.|+|++..+... ........+.. ....|..++.+|.|.|.|.+.|. +
T Consensus 19 ~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~n~-----~ 86 (103)
T 2edf_A 19 WVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS-----QKYDVVCEGTM-AMLVIRGASLKDAGEYTCEVEAS-----K 86 (103)
T ss_dssp EECTTSCEEECCEESS-SSCCCCEEESSCBCCCS-----SSEEEEEETTE-EEEEESSCCTTTCSEEEEECSSC-----E
T ss_pred EEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC-----CCEEEEECCCE-EEEEECCCCcccCEEEEEEEccC-----C
Confidence 4678999999999987 88889999999876532 12222223332 23456788999999999999982 4
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 87 ~~~~l~V~~~p~ 98 (103)
T 2edf_A 87 STASLHVEEKAS 98 (103)
T ss_dssp EEEEEEECCCSS
T ss_pred cEEEEEEeCCCC
Confidence 577788776654
No 58
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=1.3e-11 Score=68.76 Aligned_cols=83 Identities=20% Similarity=0.287 Sum_probs=56.7
Q ss_pred CCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCC-cEEEEEEEcCCCccCCeEEEEEeEeCCccceeeeEE
Q psy8666 7 EPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTG-SLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSRNAT 85 (124)
Q Consensus 7 ~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 85 (124)
....+.|.+.|.|.|.+.|+|+|..+.... .......... .......|..++..|.|.|.|.+.|..|.. ...+.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~-~~~~~ 96 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESK---IIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTA-NQTIN 96 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSS---SEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEE-EEEEE
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCC---ceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeE-eeEEE
Confidence 345788999999999999999998876421 1111111111 112233456779999999999999999987 55777
Q ss_pred EEEEeeee
Q psy8666 86 LQVAVVIF 93 (124)
Q Consensus 86 l~v~~~~~ 93 (124)
|.|...|.
T Consensus 97 l~v~~~P~ 104 (118)
T 1wwc_A 97 GHFLKEPF 104 (118)
T ss_dssp ECCSCCCC
T ss_pred EEEccCCC
Confidence 76665553
No 59
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.36 E-value=1.7e-11 Score=84.52 Aligned_cols=88 Identities=23% Similarity=0.361 Sum_probs=66.3
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.|.|.|.+.|+|+|..+... ........+... ...|..++.+|.|.|.|.+.|..|.. ..
T Consensus 396 ~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~-----~~~~~~~~~~~~-~L~i~~v~~~D~G~Y~C~A~N~~G~~-~~ 468 (570)
T 3b43_A 396 TLKGADVHLECELQGTPPFQVSWHKDKRELRSG-----KKYKIMSENFLT-SIHILNVDSADIGEYQCKASNDVGSD-TC 468 (570)
T ss_dssp ECTTCCEEEEEEEESSSSCCCEEEETTEECCSS-----SSEEEEEETTEE-EEEECSCCGGGCEEEEEEEECSSCEE-EE
T ss_pred ecCCCEEEEEEEEecCCCCEEEEEECCEECcCC-----CCEEEEEcCCEE-EEEECCCChhhCEEEEEEEEECCCeE-EE
Confidence 467999999999999999999999999887532 122222222222 23457779999999999999999987 56
Q ss_pred eEEEEEEeeeeeeee
Q psy8666 83 NATLQVAVVIFFISF 97 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~ 97 (124)
...|.|..+|.+...
T Consensus 469 ~~~l~v~~~P~~~~~ 483 (570)
T 3b43_A 469 VGSITLKAPPRFVKK 483 (570)
T ss_dssp EEEEEECCCCEEEEC
T ss_pred EEEEEeccCCccccc
Confidence 788888888876544
No 60
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=8.2e-13 Score=73.41 Aligned_cols=83 Identities=16% Similarity=0.262 Sum_probs=57.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.|.+.|+|++..+..... .... ..+.. ....|.+++.+|.|.|.|. .|..
T Consensus 24 ~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~-----~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~----~g~~- 92 (115)
T 2cr6_A 24 DVQEGSSATFRCRISPANYEPVHWFLDKTPLHANEL-----NEIDAQPGGY-HVLTLRQLALKDSGTIYFE----AGDQ- 92 (115)
T ss_dssp EEETTSCEECCCEEESTTCCSCEEEESSCEECCSSS-----CCBCCBTTTB-CCBEECSCCTTTCEEEEEE----ETTE-
T ss_pred EEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCc-----EEEEEcCCCE-EEEEEcCCChhhCEEEEEE----ECCe-
Confidence 467899999999999999999999999988764311 1111 11111 1124567799999999998 3444
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
...+.|.|..+|.+.
T Consensus 93 ~~~~~L~V~~~p~~~ 107 (115)
T 2cr6_A 93 RASAALRVTEKPSVF 107 (115)
T ss_dssp ECCEEEEEECCSSCC
T ss_pred eEEEEEEEECCCcee
Confidence 456788888776543
No 61
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.36 E-value=2.8e-11 Score=66.20 Aligned_cols=84 Identities=19% Similarity=0.319 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCCEEeeccCCCCCceEEEccCC-----cEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDGELVETSKSDAKSQRVILPTG-----SLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|.+.+. +.+.+.|+|++..+..... ......... .......|..++..|.|.|.|.+.|
T Consensus 21 ~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 97 (112)
T 3so5_A 21 SAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEM---ENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISN 97 (112)
T ss_dssp EECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEE---EEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccc---cceeeeeccCCCccccceEEEEeccccccCCeEEEEEEe
Confidence 45689999999999854 4578999999987653210 000011000 0113345677899999999999999
Q ss_pred CCccceeeeEEEEE
Q psy8666 75 SVGTAVSRNATLQV 88 (124)
Q Consensus 75 ~~~~~~~~~~~l~v 88 (124)
..|...+..+.|.|
T Consensus 98 ~~g~~~s~~~~l~V 111 (112)
T 3so5_A 98 HFGSSYSVXAXLTI 111 (112)
T ss_dssp TTEEEECCCEEEEE
T ss_pred CCCcEEEeEEEEEe
Confidence 99875456666665
No 62
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.35 E-value=5.4e-11 Score=72.19 Aligned_cols=85 Identities=31% Similarity=0.509 Sum_probs=61.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCc-cCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKE-QDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~-~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.|.+.+.|++++..+.... ..... ...... ....|..++. .|.|.|.|.+.|..+..
T Consensus 17 ~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~-~~L~i~~v~~~~d~G~Y~C~~~n~~g~~ 91 (212)
T 2yd1_A 17 GVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQ----SRYTVLEQPGGI-SILRIEPVRAGRDDAPYECVAENGVGDA 91 (212)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEEETTEECCTTS----TTEEEEEETTTE-EEEEESSCCTTTTCSEEEEEEECSSSCE
T ss_pred EEecCCEEEEEEEEccCCCCeEEEEECCEECCCCc----ceeEEEEcCCCe-EEEEEEecCCCCcCceEEEEEEeCCCCe
Confidence 46789999999999999999999999998875211 11111 112221 2234577788 99999999999998874
Q ss_pred eeeeEEEEEEee
Q psy8666 80 VSRNATLQVAVV 91 (124)
Q Consensus 80 ~~~~~~l~v~~~ 91 (124)
.+..+.|.|...
T Consensus 92 ~~~~~~l~V~~~ 103 (212)
T 2yd1_A 92 VSADATLTIYEG 103 (212)
T ss_dssp EEEEEEEEEECT
T ss_pred EEeeEEEEEecc
Confidence 466778888664
No 63
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.35 E-value=1.1e-11 Score=69.65 Aligned_cols=90 Identities=18% Similarity=0.286 Sum_probs=58.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccC---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSK---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+++.|.|.+.+.|.+.+.|++++..+.... ....................|.+++.+|.|.|.|.+.|. +.
T Consensus 12 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~ 90 (124)
T 3rbg_A 12 TVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SV 90 (124)
T ss_dssp EEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SE
T ss_pred EEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CC
Confidence 57789999999999998999999998655322100 000111111111111233456888999999999999998 66
Q ss_pred ceeeeEEEEEEeeee
Q psy8666 79 AVSRNATLQVAVVIF 93 (124)
Q Consensus 79 ~~~~~~~l~v~~~~~ 93 (124)
. ...+.|.|..+|.
T Consensus 91 ~-~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 91 S-TKEVKVIVLATMK 104 (124)
T ss_dssp E-EEEEEEEEECC--
T ss_pred C-cEEEEEEEEeCCC
Confidence 5 6678888877764
No 64
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.34 E-value=5.1e-11 Score=71.33 Aligned_cols=93 Identities=20% Similarity=0.317 Sum_probs=66.0
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEc--cCCc-E---EEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVIL--PTGS-L---FFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~--~~~~-~---~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|.+. +.|.+.+.|+|++..+.... ....... ..+. . .....|..++..|.|.|.|.+.+
T Consensus 13 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~---~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 89 (195)
T 2c5d_C 13 TGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELAD---STQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFL 89 (195)
T ss_dssp EECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCE---EEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEE
T ss_pred EEecCCcEEEecccccCCCCcEEEEEECCEEcccCC---CCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEe
Confidence 467899999999998 88999999999998876321 0011111 1111 0 23345678899999999999999
Q ss_pred CCccceeeeEEEEEEeeeeeeee
Q psy8666 75 SVGTAVSRNATLQVAVVIFFISF 97 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~~~~~~~ 97 (124)
..+...+..+.|.|..+|.+...
T Consensus 90 ~~~~~~~~~~~l~V~~~p~~~~~ 112 (195)
T 2c5d_C 90 GHQTFVSQPGYVGLEGLPYFLEE 112 (195)
T ss_dssp TTEEEECCCEEEEECCSCEEEEC
T ss_pred CCCceecccEEEEEecCCeEEcC
Confidence 88766555688888887766543
No 65
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.34 E-value=1.3e-11 Score=78.77 Aligned_cols=83 Identities=19% Similarity=0.431 Sum_probs=62.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccC-CcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPT-GSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+... ........ +.. ....|..++..|.|.|.|.+.|..|..
T Consensus 233 ~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-----~~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~N~~g~~- 305 (317)
T 2y25_A 233 TIQEGKALNLTCNVWGDPPPEVSWLKNEKALASD-----DHCNLKFEAGRT-AYFTINGVSTADSGKYGLVVKNKYGSE- 305 (317)
T ss_dssp EEETTSBBCEEEEEECSSCCEEEEEESSSEECCC-----SSEEECCBTTTE-EEEEEBSCCSTTCEEEEEEEEETTEEE-
T ss_pred EEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCC-----CcEEEEEcCCCE-EEEEECCCCHHHCEEEEEEEEeCCCeE-
Confidence 4568999999999999999999999999887632 12222222 322 333567789999999999999999987
Q ss_pred eeeEEEEEEee
Q psy8666 81 SRNATLQVAVV 91 (124)
Q Consensus 81 ~~~~~l~v~~~ 91 (124)
+..+.|.|..|
T Consensus 306 ~~~~~l~V~~P 316 (317)
T 2y25_A 306 TSDFTVSVFIP 316 (317)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEEcC
Confidence 56777777643
No 66
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.34 E-value=7.1e-12 Score=67.84 Aligned_cols=79 Identities=20% Similarity=0.345 Sum_probs=53.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+. .|.|.+.|+|++..+... ........+... ...|.+++.+|.|.|.|.+ +.. .
T Consensus 19 ~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~-----~~~~~~~~~~~~-~L~I~~~~~~D~G~Y~C~a----g~~-~ 86 (100)
T 2yuv_A 19 QVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS-----TKYIFEHKGCQR-ILFINNCQMTDDSEYYVTA----GDE-K 86 (100)
T ss_dssp EECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB-----TTEEEEEETTEE-EEEEEEECTTTCCEEEEEE----TTE-E
T ss_pred EEcCCCcEEEEEEec-CCCceEEEEECCEECCCC-----CCEEEEecCCEE-EEEEcCCCcCcCEEEEEEE----CCc-e
Confidence 356899999999998 689999999999876532 122222222221 2233455899999999998 444 4
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 87 ~~~~l~V~~~P 97 (100)
T 2yuv_A 87 CSTELFVRSGP 97 (100)
T ss_dssp EEEEEEECCSC
T ss_pred EEEEEEEecCC
Confidence 56777777654
No 67
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.33 E-value=3.4e-13 Score=75.66 Aligned_cols=88 Identities=19% Similarity=0.274 Sum_probs=60.9
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEeCCEEeeccCCCCCceEE-EccCCcEEEEEEEcCCCccCC-eEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYKDGELVETSKSDAKSQRV-ILPTGSLFFLRVVHGKKEQDG-GVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~d~-g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.+.|.|. +.|++++..+..... ...... ............|..++.+|. |.|.|.+.|..|.
T Consensus 24 ~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~ 102 (122)
T 2cry_A 24 HALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTS-GRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGS 102 (122)
T ss_dssp CCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEE-TTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCE
T ss_pred EEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCC-CCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCe
Confidence 356799999999999999997 999999887653100 001111 111222234456788899998 9999999999998
Q ss_pred ceeeeEEEEEEee
Q psy8666 79 AVSRNATLQVAVV 91 (124)
Q Consensus 79 ~~~~~~~l~v~~~ 91 (124)
. ...+.|.|..+
T Consensus 103 ~-~~~~~l~V~~~ 114 (122)
T 2cry_A 103 D-TEIIRLKEQGS 114 (122)
T ss_dssp E-EEEECCCCSCS
T ss_pred E-EEEEEEEECCC
Confidence 7 45666666543
No 68
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=8.2e-13 Score=71.10 Aligned_cols=73 Identities=33% Similarity=0.586 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-ce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT-AV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~-~~ 80 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+... ....+ .|..++..|.|.|.|.+.|..+. ..
T Consensus 21 ~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-----------~~~~L----~i~~v~~~d~G~Y~C~a~n~~~~~~~ 85 (96)
T 2ens_A 21 AVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-----------PSPVL----ILPEIGPQDQGTYSCVATHSSHGPQE 85 (96)
T ss_dssp EECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-----------CCSEE----EEESCCTTTCEEEECEECCSSCCCEE
T ss_pred EEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-----------CCCEE----EECCCCcccCEEEEEEEEeCCCCcEE
Confidence 4678999999999999999999999998766521 12233 34566899999999999996543 33
Q ss_pred eeeEEEEEE
Q psy8666 81 SRNATLQVA 89 (124)
Q Consensus 81 ~~~~~l~v~ 89 (124)
+..+.|.|.
T Consensus 86 s~~~~v~V~ 94 (96)
T 2ens_A 86 SRAVSISII 94 (96)
T ss_dssp CCCEEEEEC
T ss_pred EEEEEEEEe
Confidence 445555543
No 69
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.33 E-value=8.3e-11 Score=71.41 Aligned_cols=84 Identities=26% Similarity=0.442 Sum_probs=60.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCC-ccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKK-EQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+... ............ ....|..++ ..|.|.|.|.+.|..+..
T Consensus 17 ~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~----~~~~~~~~~~~~-~~L~i~~v~~~~d~G~Y~C~a~n~~g~~- 90 (212)
T 2yd6_A 17 TGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ----RFEVIEFDDGSG-SVLRIQPLRTPRDEAIYECVASNNVGEI- 90 (212)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCT----TEEEEEEGGGTE-EEEEECSCCTTTTCEEEEEEEEETTEEE-
T ss_pred EEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC----ceeEEEEcCCCc-eEEEEeccCCCCCCeEEEEEEEcCCCcE-
Confidence 4678999999999999999999999999877632 111111122222 223456774 899999999999998876
Q ss_pred eeeEEEEEEee
Q psy8666 81 SRNATLQVAVV 91 (124)
Q Consensus 81 ~~~~~l~v~~~ 91 (124)
...+.|.|...
T Consensus 91 ~~~~~l~V~~~ 101 (212)
T 2yd6_A 91 SVSTRLTVLRE 101 (212)
T ss_dssp EEEEEEEEECG
T ss_pred EEEEEEEEecc
Confidence 56777777654
No 70
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.33 E-value=5.7e-12 Score=76.55 Aligned_cols=81 Identities=36% Similarity=0.591 Sum_probs=60.8
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+.... ... ....+.+ .|..++.+|.|.|.|.+.|..|...+.
T Consensus 122 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~----~~~-~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~G~~~s~ 192 (212)
T 2yd1_A 122 IEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSN----PRY-SLKDGFL----QIENSREEDQGKYECVAENSMGTEHSK 192 (212)
T ss_dssp EETTCCEEECCEEECSSCCEEEEEETTEECCTTS----TTE-EEETTEE----EECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred eecCCeEEEEEEeccCCCCeEEEEECCeEcccCC----CeE-EccCCeE----EEccCChhhCEEEEEEeecCCCceeEE
Confidence 5579999999999999999999999998876321 111 2233433 456669999999999999999988555
Q ss_pred eEEEEEEeee
Q psy8666 83 NATLQVAVVI 92 (124)
Q Consensus 83 ~~~l~v~~~~ 92 (124)
.+.|.|....
T Consensus 193 ~~~l~V~~~~ 202 (212)
T 2yd1_A 193 ATNLYVKVRR 202 (212)
T ss_dssp CEEEEEEC--
T ss_pred EEEEEEEecc
Confidence 5788887654
No 71
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.33 E-value=6.3e-12 Score=80.47 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=59.1
Q ss_pred EecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.|.|.| .+.|+|++..+... . ......+ .|..++..|.|.|.|.+.|..|.. +
T Consensus 229 ~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~------~--~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~G~~-~ 295 (313)
T 4fqp_A 229 YLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF------A--VAQGAQL----LIRPVDKPINTTLICNVTNALGAR-Q 295 (313)
T ss_dssp ETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT------E--EEETTEE----EECCCSSCCEEEEEEEEECSSCEE-E
T ss_pred ecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc------e--EEeCCEE----EECcCChhhCEEEEEEEEeCCCcE-E
Confidence 4468889999999999999 59999999876531 1 1223333 356669999999999999999987 6
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|...|
T Consensus 296 ~~~~l~V~~~P 306 (313)
T 4fqp_A 296 AELTVQVKEGP 306 (313)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEEEeCC
Confidence 67888887654
No 72
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.33 E-value=2.3e-11 Score=72.58 Aligned_cols=83 Identities=25% Similarity=0.456 Sum_probs=59.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+...... ........+. ....|..++..|.|.|.|.+.|..+.. .
T Consensus 16 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~n~~~~~-~ 90 (194)
T 2a38_A 16 VVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLP--GVQISFSDGR--AKLTIPAVTKANSGRYSLKATNGSGQA-T 90 (194)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTST--TCEEEEETTE--EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCC--ceEEEeCCCE--EEEEECCCCcccCEEEEEEEEcCCceE-e
Confidence 4678999999999999999999999999876542110 1111112221 223457779999999999999988776 4
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
....|.|.
T Consensus 91 ~~~~l~v~ 98 (194)
T 2a38_A 91 STAELLVK 98 (194)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 56677776
No 73
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=1.8e-12 Score=70.91 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=57.0
Q ss_pred EEecCCCEEEEEeeeccCC-CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|. +.+.|+|+|..+... .+......+.. ....|.+++.+|.|.|.|.+.|.
T Consensus 19 ~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~-----~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~~~----- 87 (104)
T 2eny_A 19 EVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS-----SRFQATRQGRK-YILVVREAAPSDAGEVVFSVRGL----- 87 (104)
T ss_dssp EEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC-----SSCEEEEETTE-EEEEECSCCTTTCSCEEEEETTE-----
T ss_pred EEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC-----CCEEEEEcCCE-EEEEECCCCHHHCEEEEEEECCe-----
Confidence 4678999999999988775 479999999877542 12222222322 23456788999999999987552
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
.....|.|..+|.
T Consensus 88 ~~~a~L~V~~~p~ 100 (104)
T 2eny_A 88 TSKASLIVRERSG 100 (104)
T ss_dssp EEEECEEEECCCS
T ss_pred eEEEEEEEeCCCc
Confidence 3567788877664
No 74
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.32 E-value=9.2e-11 Score=69.85 Aligned_cols=89 Identities=28% Similarity=0.446 Sum_probs=65.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.+.+.|++++..+... .........+.. ..|..++..|.|.|.|.+.+..+....
T Consensus 18 ~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~----~~~~~~~~~~~~---L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 90 (192)
T 2iep_A 18 DALVEEVATFMCAVESYPQPEISWTRNKILIKLF----DTRYSIRENGQL---LTILSVEDSDDGIYCCTANNGVGGAVE 90 (192)
T ss_dssp EEETTSCEEEECCEEEESCCEEEEEETTEECCTT----CTTEEEEGGGTE---EEESSCCGGGCEEEEEEEECSSSCCEE
T ss_pred eeeCCCcEEEEeeCCCCCCCeEEEEECCEEcccc----CccEEEcCCccE---EEEcCCCcccCeEEEEEEEcCCCceeE
Confidence 4678999999999999999999999999876532 122222222221 235667999999999999998887545
Q ss_pred eeEEEEEEeeeeeeee
Q psy8666 82 RNATLQVAVVIFFISF 97 (124)
Q Consensus 82 ~~~~l~v~~~~~~~~~ 97 (124)
....|.|..+|.+...
T Consensus 91 ~~~~l~v~~~p~~~~~ 106 (192)
T 2iep_A 91 SCGALQVKMKPKITRP 106 (192)
T ss_dssp EEEEEEEEEEEEEEEC
T ss_pred eEEEEEEEeCCccccC
Confidence 6778888877765543
No 75
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.32 E-value=1.1e-10 Score=73.46 Aligned_cols=88 Identities=26% Similarity=0.331 Sum_probs=64.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|++..+.... ...... ... . ....|..++..|.|.|.|.+.|..+.. +
T Consensus 16 ~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~---~~~~~~-~~~-~-~~L~i~~v~~~d~G~Y~C~~~n~~g~~-~ 88 (284)
T 2rik_A 16 DLALGESGTFKCHVTGTAPIKITWAKDNREIRPGG---NYKMTL-VEN-T-ATLTVLKVTKGDAGQYTCYASNVAGKD-S 88 (284)
T ss_dssp EEETTCCEEEEEEEESSSCCEEEEEETTEECCSSS---SEEEEE-ETT-E-EEEEESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCC---cEEEEE-cCC-E-EEEEEecCCcccCEEEEEEEEECCceE-E
Confidence 46789999999999999999999999998775321 111111 111 1 223457779999999999999998876 6
Q ss_pred eeEEEEEEeeeeeee
Q psy8666 82 RNATLQVAVVIFFIS 96 (124)
Q Consensus 82 ~~~~l~v~~~~~~~~ 96 (124)
..+.|.|..+|.+..
T Consensus 89 ~~~~l~V~~~p~~~~ 103 (284)
T 2rik_A 89 CSAQLGVQEPPRFIK 103 (284)
T ss_dssp EEEEEEEECCCEEEE
T ss_pred EEEEEEccCCCcccc
Confidence 688888888776543
No 76
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.31 E-value=3.8e-11 Score=71.89 Aligned_cols=80 Identities=28% Similarity=0.496 Sum_probs=58.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcC-CCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHG-KKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+... ............ ...|.. ++..|.|.|.|.+.|..|.. +
T Consensus 116 ~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~~~~~~~~~-~L~i~~~~~~~d~G~Y~C~a~N~~g~~-~ 188 (197)
T 2j8h_A 116 ALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-----GHYQVIVTRSFT-SLVFPNGVERKDAGFYVVCAKNRFGID-Q 188 (197)
T ss_dssp EETTCCCEEEEEEEEESCCEEEEEESSCEECSS-----SSCEEEECSSEE-EEECTTCCCGGGCEEEEEEEEETTEEE-E
T ss_pred EeCCCEEEEEEEEEecCCCcEEEEECCEEeecC-----CCEEEEEcCCce-EEEEeCCCCcccCEeEEEEEEeCCCcE-e
Confidence 567999999999999999999999999877632 111122222222 234566 78999999999999999886 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 189 ~~~~l~V~ 196 (197)
T 2j8h_A 189 KTVELDVA 196 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 67777664
No 77
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.31 E-value=8e-12 Score=76.02 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=50.4
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ....+.....++.+.+.. +..++.+|.|.|.|.|.|..|..+
T Consensus 118 v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~-~~~~r~~~~~~g~l~il~-i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 118 FPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPT-AANGGVMKEKDGSLSVAV-DLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp SSCSCCEEEEEEEEEESCCEEEECCC-------------CCEECTTSCEEEEE-EEEECSSCCCCEEEEEESSSCEEE
T ss_pred EcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcc-cccceEEEeCCCCEEEEE-ECCCCHHHCEEEEEEEEcCCCEEE
Confidence 4579999999999999999999998765443211 111233344556554432 344589999999999999999874
No 78
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2.3e-12 Score=69.94 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=55.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.| |.+.|+|+|..+...... ..+......+.. ....|.+++.+|.|.|.|.+.|. .
T Consensus 19 ~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~-~~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~a~n~-----~ 90 (101)
T 2edk_A 19 QVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSF-KARYRFKKDGKR-HILIFSDVVQEDRGRYQVITNGG-----Q 90 (101)
T ss_dssp EEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCS-SCCCEEEECSSE-EEEECSSCCGGGCSBEEEECSSC-----E
T ss_pred EEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCc-ceeEEEEECCCE-EEEEECCCChhhCEEEEEEEcCC-----c
Confidence 467899999999999888 999999999876542100 002222333332 23456788999999999999872 2
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
....|.|..+
T Consensus 91 ~~~~l~V~~~ 100 (101)
T 2edk_A 91 CEAELIVEEK 100 (101)
T ss_dssp ECCBEEEECC
T ss_pred EEEEEEEeCC
Confidence 3445665544
No 79
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.30 E-value=2.2e-11 Score=74.04 Aligned_cols=87 Identities=69% Similarity=1.168 Sum_probs=63.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.|.+.|+|++..+.... ..........+.+.+...|..++..|.|.|.|.+.|..+...+
T Consensus 20 ~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~ 97 (217)
T 2vr9_A 20 VVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNE--KKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS 97 (217)
T ss_dssp EECTTSCEEECCEEECSSCCEEEEEETTEECCCSS--SSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEEC
T ss_pred EEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCC--ccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCcccc
Confidence 46789999999999999999999999998876421 1112223344555444456677899999999999998876644
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
....|.|..
T Consensus 98 ~~~~l~v~~ 106 (217)
T 2vr9_A 98 RHASLQIAV 106 (217)
T ss_dssp CCEEEEECE
T ss_pred ccceEEEEE
Confidence 566666655
No 80
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.30 E-value=3.7e-11 Score=64.42 Aligned_cols=75 Identities=20% Similarity=0.351 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+ +.|.+.+.|+|++..+.... .......+.. ....|..++..|.|.|.|.+ +.. .
T Consensus 19 ~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~-----~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a----g~~-~ 86 (95)
T 2k1m_A 19 EVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASN-----KYGLATEGTR-HTLTVREVGPADQGSYAVIA----GSS-K 86 (95)
T ss_dssp EEETTSCEEEEEEC-SSSSCCCEEECSSSEECSST-----TCEEEEETTE-EEEEESSCCTTCCSEEEEEE----TTE-E
T ss_pred EEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCC-----cEEEEEcCCE-EEEEEcCCCcccCEEEEEEE----CCc-e
Confidence 46789999999999 77889999999998775321 1122222322 23456788999999999998 333 3
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 87 ~~~~l~V 93 (95)
T 2k1m_A 87 VKFDLKV 93 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3455554
No 81
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.30 E-value=5.7e-11 Score=75.54 Aligned_cols=88 Identities=27% Similarity=0.427 Sum_probs=64.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+.... ..... ...+.. ....|..++..|.|.|.|.+.|..|..
T Consensus 15 ~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~n~~g~~- 88 (305)
T 2nzi_A 15 NVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG----LKYRIQEFKGGY-HQLIIASVTDDDATVYQVRATNQGGSV- 88 (305)
T ss_dssp EECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS----SSEEEEEETTTE-EEEEESSCCGGGCSEEEEEEEETTEEE-
T ss_pred EEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC----CeEEEEECCCCE-EEEEEccCChhhCeEEEEEEEcCCCCc-
Confidence 46789999999999999999999999998776321 11111 112221 233467789999999999999998876
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
+..+.|.|..+|.+.
T Consensus 89 ~~~~~l~V~~~p~~~ 103 (305)
T 2nzi_A 89 SGTASLEVEVPAKIH 103 (305)
T ss_dssp EEEEEEEECEEEEEC
T ss_pred cceEEEEEecCCccC
Confidence 667888887776543
No 82
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.30 E-value=1.8e-11 Score=66.54 Aligned_cols=79 Identities=24% Similarity=0.455 Sum_probs=55.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.| +.|+|++..+... ........+... ...|.+++.+|.|.|.|. .+.. .
T Consensus 19 ~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~-----~~~~~~~~~~~~-~L~I~~v~~~D~G~Y~C~----~g~~-~ 86 (103)
T 2e7b_A 19 EVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG-----DKYSLRQEGAML-ELVVRNLRPQDSGRYSCS----FGDQ-T 86 (103)
T ss_dssp EEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS-----SSEEEEECSSEE-EEEECSCCTTTCCCEEEE----CSSC-B
T ss_pred EEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC-----CcEEEEEcCCEE-EEEEccCCcccCEEEEEE----ECCc-E
Confidence 46789999999999998888 9999998876432 222333344432 334678899999999998 3333 4
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..+|
T Consensus 87 ~~~~l~V~~~p 97 (103)
T 2e7b_A 87 TSATLTVTALP 97 (103)
T ss_dssp CCBCEEEECCC
T ss_pred EEEEEEEEecc
Confidence 46677776655
No 83
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.30 E-value=7.4e-11 Score=64.14 Aligned_cols=88 Identities=16% Similarity=0.228 Sum_probs=57.9
Q ss_pred EEecCCCEEEEEeeec-cCCCeEEEEeCCEEeecc-CCCCCceEE-EccCC-cEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPTIEWYKDGELVETS-KSDAKSQRV-ILPTG-SLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~v~w~k~g~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
++..|+.+.|.|++.+ .|.|.++|.|.+...+.. ......... ..... +..++ .+..+...|.|.|+|.|.+..|
T Consensus 25 tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL-~f~~V~~sDsG~YrCsAn~~~g 103 (122)
T 1xau_A 25 SAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVL-HFKPIHLSDNGSYSCSTNFNSQ 103 (122)
T ss_dssp EECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEE-EETTCCGGGCEEEEEEEEETTE
T ss_pred EEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEE-EEeeEEEcCCccEEEEeeCCCC
Confidence 4678999999999964 689999999865322111 001110111 11222 33333 4578899999999999999998
Q ss_pred cceeeeEEEEEEe
Q psy8666 78 TAVSRNATLQVAV 90 (124)
Q Consensus 78 ~~~~~~~~l~v~~ 90 (124)
...+....|.|..
T Consensus 104 ~ieSHs~ti~V~~ 116 (122)
T 1xau_A 104 VINSHSVTIHVRE 116 (122)
T ss_dssp EEECCCEEEEEC-
T ss_pred ceeeeEEEEEEEe
Confidence 8877777776654
No 84
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.30 E-value=6.6e-11 Score=81.57 Aligned_cols=109 Identities=25% Similarity=0.278 Sum_probs=73.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.|.|.|.+.|+|++..+... ............ ...|.+++.+|.|.|.|.+.|..|.. +.
T Consensus 303 v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~-----~~~~~~~~~~~~-~L~i~~v~~~D~G~Y~C~a~N~~g~~-~~ 375 (570)
T 3b43_A 303 VKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-----SKFRMSFVESVA-VLEMYNLSVEDSGDYTCEAHNAAGSA-SS 375 (570)
T ss_dssp EESSCEEEEEEEEESSSSCEEEEEETTEECCCS-----SSEEEEEETTEE-EEEEESCCGGGCEEEEEEEEBTTBCC-EE
T ss_pred EcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC-----CcEEEEEECCEE-EEEECCCCcccCEEEEEEEEeCCCEE-EE
Confidence 567899999999999999999999999887632 111111111111 22356779999999999999999987 56
Q ss_pred eEEEEEEeeeeeeeeccceeh-hhhhheeeeeecCcc
Q psy8666 83 NATLQVAVVIFFISFFRFKLS-AYLYDLFRGVVNKTN 118 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 118 (124)
.+.|.|..+|.+...+..... ..-...+.|.+.|..
T Consensus 376 ~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P 412 (570)
T 3b43_A 376 STSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTP 412 (570)
T ss_dssp EEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSS
T ss_pred EEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCC
Confidence 788999888876544332111 111224556655543
No 85
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.29 E-value=7.8e-11 Score=80.20 Aligned_cols=92 Identities=18% Similarity=0.142 Sum_probs=68.6
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEeCCEEeeccCCCCCceEEEccCC---cEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYKDGELVETSKSDAKSQRVILPTG---SLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
.+..|+.+.|.|.+.+.|.|. +.|+|++..+.... ......... .......|..++..|.|.|.|.+.|..|
T Consensus 324 ~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~----~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 399 (524)
T 2ec8_A 324 FVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKW----EDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV 399 (524)
T ss_dssp EECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSB----CCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred EEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCc----cceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCc
Confidence 356899999999999999999 99999998765421 011111111 1233445678899999999999999999
Q ss_pred cceeeeEEEEEEeeeeeeeec
Q psy8666 78 TAVSRNATLQVAVVIFFISFF 98 (124)
Q Consensus 78 ~~~~~~~~l~v~~~~~~~~~~ 98 (124)
.. +..+.|.|..+|.+...+
T Consensus 400 ~~-~~~~~l~V~~~P~i~~~~ 419 (524)
T 2ec8_A 400 NA-AIAFNVYVNTKPEILTYD 419 (524)
T ss_dssp EE-EEEEEEEECEEEEEEEEE
T ss_pred eE-EEEEEEEEecCCeEeecc
Confidence 87 678899998888776554
No 86
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.29 E-value=3.3e-11 Score=79.35 Aligned_cols=84 Identities=29% Similarity=0.480 Sum_probs=61.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeC-CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKD-GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.|.|.|.+.|+|+ +..+.. ........+.+ .|..++.+|.|.|.|.+.|..|.. .
T Consensus 217 ~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~------~~~~~~~~~~L----~I~~v~~~D~G~Y~C~a~N~~G~~-~ 285 (384)
T 3kld_A 217 AEKGTTVKLECFALGNPVPTILWRRADGKPIAR------KARRHKSNGIL----EIPNFQQEDAGSYECVAENSRGKN-V 285 (384)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTCCCCCT------TCEECTTSCEE----EECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred ecCCCcEEEEEEEeecCCCcEEEEeCCCccccc------cceecCCCcEE----EECCCChhhCEEEEEEEEcCCCeE-E
Confidence 46799999999999999999999995 433331 11111223333 356779999999999999999987 5
Q ss_pred eeEEEEEEeeeeeeee
Q psy8666 82 RNATLQVAVVIFFISF 97 (124)
Q Consensus 82 ~~~~l~v~~~~~~~~~ 97 (124)
....|.|..+|.+...
T Consensus 286 ~~~~l~v~~~P~~~~~ 301 (384)
T 3kld_A 286 AKGQLTFYAQPNWVQI 301 (384)
T ss_dssp EEEEEEEEEEEEEEEC
T ss_pred EEEEEEEecCCccccC
Confidence 6778888887765443
No 87
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=2.9e-11 Score=65.67 Aligned_cols=80 Identities=21% Similarity=0.300 Sum_probs=55.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|. .+.|.|.+.|+|++..+... ........+.. ....|.+++.+|.|.|.|. .+.. .
T Consensus 19 ~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~----~g~~-~ 86 (103)
T 2dku_A 19 QVEEKGTAVFTCK-TEHPAATVTWRKGLLELRAS-----GKHQPSQEGLT-LRLTISALEKADSDTYTCD----IGQA-Q 86 (103)
T ss_dssp EEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSS-----SSEEEEEETTE-EEEEEESCCTTTCSEEEEE----CSSC-B
T ss_pred EEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCC-----CeEEEEeCCCE-EEEEECCCCcccCEEEEEE----eCCc-e
Confidence 4678999999999 47888999999999876532 12222223322 2234567799999999997 4444 4
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|...|.
T Consensus 87 ~~~~l~V~~~p~ 98 (103)
T 2dku_A 87 SRAQLLVQGRRS 98 (103)
T ss_dssp CCEEEEEECSCC
T ss_pred EEEEEEEeCccC
Confidence 567888876654
No 88
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.29 E-value=1.4e-10 Score=69.07 Aligned_cols=92 Identities=15% Similarity=0.342 Sum_probs=62.5
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.+ .+.+.|++ +|..+.... ................|..++..|.|.|.|.+.+..+..
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 88 (191)
T 1epf_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ----QRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (191)
T ss_dssp EEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBS----SSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEE
T ss_pred EEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCC----CeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcc
Confidence 467899999999998876 78999999 887665321 111111110111223457779999999999999988544
Q ss_pred eeeeEEEEEEeeeeeeee
Q psy8666 80 VSRNATLQVAVVIFFISF 97 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~ 97 (124)
.+..+.|.+..+|.+...
T Consensus 89 ~~~~~~l~v~~~p~~~~~ 106 (191)
T 1epf_A 89 SEATVNVKIFQKLMFKNA 106 (191)
T ss_dssp EEEEEEEEEECCSEEEEC
T ss_pred eEEEEEEEeecCceEecC
Confidence 466777887776655433
No 89
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.29 E-value=1.6e-10 Score=68.78 Aligned_cols=87 Identities=24% Similarity=0.484 Sum_probs=62.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|. .+.|++ ++..+... ........+.. ....|..++..|.|.|.|.+.+..+...
T Consensus 13 ~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 85 (189)
T 2v44_A 13 ELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST-----QRVVVQKEGVR-SRLTIYNANIEDAGIYRCQATDAKGQTQ 85 (189)
T ss_dssp EEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC-----SSEEEEEETTE-EEEEECSCCGGGCEEEEEEEECTTSCEE
T ss_pred EEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC-----ceEEEECCCCe-EEEEEccCCcccCeEEEEEEEeCCCCcE
Confidence 4678999999999988877 899999 66655421 12222222222 2334677799999999999999988765
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
+..+.|.|..+|.+.
T Consensus 86 ~~~~~l~v~~~p~~~ 100 (189)
T 2v44_A 86 EATVVLEIYQKLTFR 100 (189)
T ss_dssp EEEEEEEEECCCEEE
T ss_pred EEEEEEEEecCCcee
Confidence 667788887766554
No 90
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.29 E-value=2.8e-11 Score=80.96 Aligned_cols=84 Identities=11% Similarity=0.101 Sum_probs=57.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.|.+.|++++..+.... . ............|.+++.+|.|.|.|.+.|..|.. .
T Consensus 59 ~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~-----~--~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~-~ 130 (423)
T 3qs7_E 59 EVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQP-----H--FDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY-T 130 (423)
T ss_dssp EECSSCCEEEEEECSCCSSCEEEEEETTEEECCCC-----B--C-----CEEEEEESSCCSSSCSEEEEEEEC--CEE-E
T ss_pred EEecCCcEEEEEEEEcCCCCeEEEEECCCccCccc-----e--eccccceEEEEEEeecCcccCEEEEEEEEcCCCcE-E
Confidence 57789999999999999999999999987765311 0 01111111223567889999999999999998876 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 131 ~~~~l~V~~~p~ 142 (423)
T 3qs7_E 131 ILFTVSIRNTLL 142 (423)
T ss_dssp EEEEEEEC----
T ss_pred EEEEEEEecCcc
Confidence 577777775443
No 91
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.29 E-value=6.4e-11 Score=65.36 Aligned_cols=79 Identities=20% Similarity=0.417 Sum_probs=55.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+. |.+.|+|++..+... ........+.. ....|.+++.+|.|.|.|.+ +.. .
T Consensus 30 ~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a----~~~-~ 96 (113)
T 2edh_A 30 EATEGATAVLRCELSKM--APVEWWKGHETLRDG-----DRHSLRQDGAR-CELQIRGLVAEDAGEYLCMC----GKE-R 96 (113)
T ss_dssp EECTTSCEEEEEEESSC--CCCEEEESSSBCCCS-----SSEEEEEETTE-EEEEECSCCSTTCEEEEEEE----TTE-E
T ss_pred EEeCCCeEEEEEEECCC--CcEEEEECCEECCCC-----CcEEEEECCCE-EEEEECCCChhhCEEEEEEe----CCC-C
Confidence 46789999999999764 789999999876532 22222333322 23356788999999999998 333 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 97 ~~~~l~V~~~p~ 108 (113)
T 2edh_A 97 TSAMLTVRAMPS 108 (113)
T ss_dssp EEEEEEECCCCC
T ss_pred EEEEEEEeCCCC
Confidence 567788876653
No 92
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.28 E-value=2.2e-10 Score=72.14 Aligned_cols=88 Identities=30% Similarity=0.426 Sum_probs=64.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.+.+.|++++..+... ........... ....|..++..|.|.|.|.+.|..|.. ..
T Consensus 111 v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~ 183 (284)
T 2rik_A 111 VKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-----SKFRMSFVESV-AVLEMYNLSVEDSGDYTCEAHNAAGSA-SS 183 (284)
T ss_dssp EETTCCEEEEEEEESSSCCEEEEEETTEECCCS-----SSEEEEEETTE-EEEEECSCCGGGCEEEEEEEECSSCEE-EE
T ss_pred ecCCceEEEEEEEeeeCCCEEEEEECCEECcCC-----CcEEEEEcCCE-EEEEECCCCcccCEEEEEEEEcCCCce-eE
Confidence 568999999999999999999999999877632 11111111111 223456778999999999999998877 56
Q ss_pred eEEEEEEeeeeeeee
Q psy8666 83 NATLQVAVVIFFISF 97 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~ 97 (124)
.+.|.|..+|.+...
T Consensus 184 ~~~l~V~~~p~~~~~ 198 (284)
T 2rik_A 184 STSLKVKEPPVFRKK 198 (284)
T ss_dssp EEEEEEECCCBCCSC
T ss_pred EEEEEEecCCcceeC
Confidence 888888887765443
No 93
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.28 E-value=3.2e-11 Score=72.24 Aligned_cols=77 Identities=29% Similarity=0.438 Sum_probs=57.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+... .........+ .|..++..|.|.|.|.+.|..|.. .
T Consensus 124 ~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~------~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~-~ 192 (201)
T 3s97_C 124 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPST------AEISTSGAVL----KIFNIQLEDEGIYECEAENIRGKD-K 192 (201)
T ss_dssp EEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT------CEEETTTTEE----EECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc------eeecCCCCEE----EEccCChhhCEEEEEEEEecCCce-e
Confidence 3567999999999999999999999999865521 2222233333 345668999999999999999887 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 193 ~~~~l~V~ 200 (201)
T 3s97_C 193 HQARIYVQ 200 (201)
T ss_dssp EEEEEEEE
T ss_pred eeEEEEEe
Confidence 56666664
No 94
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.28 E-value=4.8e-11 Score=71.22 Aligned_cols=79 Identities=32% Similarity=0.521 Sum_probs=56.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+... ........+... ...|..++..|.|.|.|.+.|..|.. ..
T Consensus 115 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~ 187 (194)
T 2a38_A 115 VRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS-----LDFQISQEGDLY-SLLIAEAYPEDSGTYSVNATNSVGRA-TS 187 (194)
T ss_dssp ECTTEEEEEEEEEEEESCCEEEEEETTEECCCS-----SSEEEEEETTEE-EEEEEEECGGGCEEEEEEEEETTEEE-EE
T ss_pred EcCCCEEEEEEEEEEecCCeEEEEECCEECCCC-----CcEEEEEcCCEE-EEEECCCChhcCeEEEEEEEeCCCce-EE
Confidence 567889999999999999999999999877632 122222222211 12234448999999999999999887 45
Q ss_pred eEEEEE
Q psy8666 83 NATLQV 88 (124)
Q Consensus 83 ~~~l~v 88 (124)
.+.|.|
T Consensus 188 ~~~l~V 193 (194)
T 2a38_A 188 TAELLV 193 (194)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666655
No 95
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.28 E-value=3.5e-11 Score=69.34 Aligned_cols=90 Identities=11% Similarity=0.166 Sum_probs=58.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccC---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSK---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.+.|.+.+.|++.+....... .....+..............|.+++.+|.|.|.|.+.|. +.
T Consensus 49 ~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~ 127 (145)
T 1z9m_A 49 TVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PV 127 (145)
T ss_dssp EEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SC
T ss_pred EEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CC
Confidence 56789999999999988889999995332111000 000111111111111233456888999999999999998 66
Q ss_pred ceeeeEEEEEEeeee
Q psy8666 79 AVSRNATLQVAVVIF 93 (124)
Q Consensus 79 ~~~~~~~l~v~~~~~ 93 (124)
. +..+.|.|..+|.
T Consensus 128 ~-~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 128 R-TAKSLVTVLGIPQ 141 (145)
T ss_dssp E-EEEEEEEEECCCC
T ss_pred c-eEEEEEEEEeCCC
Confidence 5 6678888877653
No 96
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.28 E-value=1.4e-11 Score=81.15 Aligned_cols=77 Identities=35% Similarity=0.591 Sum_probs=59.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.|.|.|.+.|+|+|..+... ... ....+.+ .|..++.+|.|.|.|.+.|..|.. .
T Consensus 306 ~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-----~~~-~~~~~~L----~i~~v~~~D~G~Y~C~A~N~~G~~-~ 374 (384)
T 3kld_A 306 HVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR-----DRI-QIEQGTL----NITIVNLSDAGMYQCVAENKHGVI-F 374 (384)
T ss_dssp EECTTCCEEEECEEEEESCCEEEEEETTEECCCB-----TTE-EEETTEE----EESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EecCCCCEEEEeECCccCCCeEEEEECCEECCCC-----ccE-EEeCCEE----EEeecChhhCEEEEEEEEeCCceE-E
Confidence 3567999999999999999999999999887532 121 2233433 356668999999999999999988 4
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
....|.|.
T Consensus 375 ~~a~L~V~ 382 (384)
T 3kld_A 375 SSAELSVI 382 (384)
T ss_dssp EEEEEEEC
T ss_pred eceEEEEe
Confidence 56777664
No 97
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=8.6e-12 Score=68.20 Aligned_cols=78 Identities=23% Similarity=0.343 Sum_probs=54.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.+ +.|+|++..+... ........+.. ....|..++.+|.|.|.|.+.|... +
T Consensus 19 ~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~n~~~---~ 88 (106)
T 2dlt_A 19 TVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS-----KRITISHVGRF-HKLVIDDVRPEDEGDYTFVPDGYAL---S 88 (106)
T ss_dssp EEESSCCEECCCEESCSSCE-EEEEESSCBCCCC-----SSCEEEEETTE-EEEEESSCCTTTCSCEEEEEETSCC---C
T ss_pred EEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC-----CCEEEEEeCCE-EEEEECCCCcCCCEEEEEEEccCCc---e
Confidence 46789999999999988877 9999999876532 11122222322 2335678899999999999999822 2
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
....|.|.
T Consensus 89 ~~~~l~V~ 96 (106)
T 2dlt_A 89 LSAKLNFL 96 (106)
T ss_dssp CCBCEEEE
T ss_pred EEEEEEEE
Confidence 34455554
No 98
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.28 E-value=3.5e-10 Score=67.42 Aligned_cols=84 Identities=27% Similarity=0.433 Sum_probs=59.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe--CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCC-ccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK--DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKK-EQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.+.|.|.+.|++ ++..+.... ............. ....|..++ .+|.|.|.|.+.|..|.
T Consensus 103 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~--~~~~~~~~~~~~~-~~L~i~~~~~~~d~G~Y~C~a~N~~g~ 179 (190)
T 2wv3_A 103 NKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISN--SSGRFFIINKENY-TELNIVNLQITEDPGEYECNATNSIGS 179 (190)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCC--TTSCEEEEECSSE-EEEEECSCCTTTSCEEEEEEEECSSCE
T ss_pred eeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeec--CCCeEEEecCCCe-eEEEEEeccccCCCEEEEEEEEecCCc
Confidence 35689999999999999999999999 777664321 1122222222222 233457778 79999999999999988
Q ss_pred ceeeeEEEEEE
Q psy8666 79 AVSRNATLQVA 89 (124)
Q Consensus 79 ~~~~~~~l~v~ 89 (124)
. ...+.|.|.
T Consensus 180 ~-~~~~~l~V~ 189 (190)
T 2wv3_A 180 A-SVSTVLRVR 189 (190)
T ss_dssp E-EEEEEEEEE
T ss_pred c-eeEEEEEEE
Confidence 7 556666654
No 99
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.28 E-value=2.8e-11 Score=79.40 Aligned_cols=92 Identities=17% Similarity=0.257 Sum_probs=66.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc--cCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL--PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|+|..+..... ...... ..+. ...|..++..|.|.|.|.+.|..|..
T Consensus 223 ~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~---~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~ 296 (395)
T 1bih_A 223 MAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPE---DRITRHNRTSGK---RLLFKTTLPEDEGVYTCEVDNGVGKP 296 (395)
T ss_dssp EEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTT---SSEESCSSSTTS---EEEESSCCGGGCEEEEEEECCSSSSC
T ss_pred EEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCc---eeEEEEecCCCc---eEEEccCChhhCEEEEEEEEeCCCCc
Confidence 356799999999999999999999999987753211 111111 1111 12456779999999999999999887
Q ss_pred eeeeEEEEEEeeeeeeeecc
Q psy8666 80 VSRNATLQVAVVIFFISFFR 99 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~~~ 99 (124)
.+..+.|.|..+|.+...+.
T Consensus 297 ~~~~~~l~V~~~P~~~~~~~ 316 (395)
T 1bih_A 297 QKHSLKLTVVSAPKYEQKPE 316 (395)
T ss_dssp EEEEEEEEEEEEEEEEECCC
T ss_pred eEEEEEEEEEcCCccccCCC
Confidence 55588999988887765443
No 100
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.27 E-value=4.8e-11 Score=72.05 Aligned_cols=91 Identities=60% Similarity=1.016 Sum_probs=63.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEE-EEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFL-RVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+.+.|++++..+................+.+.+. ..+..++..|.|.|.|.+.|..+...
T Consensus 20 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 99 (212)
T 2v9r_A 20 IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (212)
T ss_dssp EECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEE
T ss_pred EEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCcee
Confidence 46789999999999999999999999998876432211222333444444322 22345678999999999999887654
Q ss_pred eeeEEEEEEeee
Q psy8666 81 SRNATLQVAVVI 92 (124)
Q Consensus 81 ~~~~~l~v~~~~ 92 (124)
+....|.|...+
T Consensus 100 ~~~~~l~V~~~~ 111 (212)
T 2v9r_A 100 SHDASLEVAILR 111 (212)
T ss_dssp CCCEEEEECEEC
T ss_pred ecceEEEEEecc
Confidence 556777776543
No 101
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=4.5e-11 Score=66.21 Aligned_cols=85 Identities=16% Similarity=0.193 Sum_probs=57.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCC-----CCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSD-----AKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+.+|+.+.|.|.+.+ .|.+.|+|||..+...... ...+......+. .....|..++.+|.|.|.|...+.
T Consensus 19 ~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~-~~~L~I~~v~~~D~G~Y~~~~~~~- 94 (112)
T 2e6q_A 19 QVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGL-QHRLILHAVKHQDSGALVGFSCPG- 94 (112)
T ss_dssp EEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTT-EEEEEEESCCSTTCSEEEEEEETT-
T ss_pred EEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCc-EEEEEECCCCHHHCccEEEEEECC-
Confidence 4678999999999987 7789999999988643100 000333333343 334567888999999997755432
Q ss_pred ccceeeeEEEEEEeeee
Q psy8666 77 GTAVSRNATLQVAVVIF 93 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~ 93 (124)
. .....|.|..+|.
T Consensus 95 --~-~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 95 --V-QDSAALTIQESSG 108 (112)
T ss_dssp --E-EEEEEEEEECSSC
T ss_pred --e-eEEEEEEEeCCCc
Confidence 2 3477888877664
No 102
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.26 E-value=3.3e-11 Score=76.11 Aligned_cols=82 Identities=32% Similarity=0.577 Sum_probs=58.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+++|..+...... ........... ...|..++.+|.|.|.|.+.|..|.. +.
T Consensus 208 ~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~-~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~ 282 (291)
T 1qz1_A 208 ANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEED-DEKHIFSDDSS---ELTIRNVDKNDEAEYVCIAENKAGEQ-DA 282 (291)
T ss_dssp TTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--C-CSSEEECTTSC---EEEECSCCGGGCEEEEEEEEETTEEE-EE
T ss_pred cccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCC-CcceEEcCCCc---EEEEEecChhcCEEEEEEEEeCCCce-EE
Confidence 356999999999999999999999999887643110 01222222222 12356678999999999999999987 56
Q ss_pred eEEEEEE
Q psy8666 83 NATLQVA 89 (124)
Q Consensus 83 ~~~l~v~ 89 (124)
.+.|.|.
T Consensus 283 ~~~l~V~ 289 (291)
T 1qz1_A 283 SIHLKVF 289 (291)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777764
No 103
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.26 E-value=2.1e-10 Score=72.48 Aligned_cols=89 Identities=20% Similarity=0.241 Sum_probs=62.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccC--CcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPT--GSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++...... .......... ........|..++.+|.|.|.|.+.|..|..
T Consensus 192 ~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 268 (289)
T 3mjg_X 192 VVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL---VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH 268 (289)
T ss_dssp EEETTSCEEEEEEEESCSSBEEEEECTTSSSSCC---CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTE
T ss_pred eeEcCCCEEEEEEECCCCCcceEEEcCCccCCCc---ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCc
Confidence 4678999999999999999999999876543211 0011111111 2233445667889999999999999999988
Q ss_pred eeeeEEEEEEeeeee
Q psy8666 80 VSRNATLQVAVVIFF 94 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~ 94 (124)
.....|.|...+..
T Consensus 269 -~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 269 -QDEKAINITVVESG 282 (289)
T ss_dssp -EEEEEEEEEEEC--
T ss_pred -eeEEEEEEEEEecC
Confidence 66888888877654
No 104
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.26 E-value=1.7e-11 Score=73.99 Aligned_cols=81 Identities=21% Similarity=0.351 Sum_probs=59.4
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccC-CcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPT-GSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.| |.+.|++++..+... ........ ..+ .|..++..|.|.|.|.+.|..|...+
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~-----~~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLT-----ERMTLSQNNSIL----RIDPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCC-----SSEEEETTTTEE----EESSCCGGGCEEEEEEEECTTCCEEC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCC-----CCeEEcCCCCEE----EEeccCHHhCeEEEEEEecCCCcccC
Confidence 35689999999998866 899999999887632 12222222 333 35666999999999999999999888
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..++.
T Consensus 192 ~~~~l~v~~~~~ 203 (208)
T 3r4d_A 192 NSIKLDIIFDPH 203 (208)
T ss_dssp CCEEECCC----
T ss_pred CceeeeEEeCCc
Confidence 888888877664
No 105
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.26 E-value=7.9e-11 Score=70.29 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=57.9
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCc-cCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKE-QDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+... ........... ....|..+.. .|.|.|.|.+.|..|.. .
T Consensus 115 ~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~~d~G~Y~C~a~n~~g~~-~ 187 (197)
T 3lcy_A 115 GAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS-----ENITIENTEHY-THLVMKNVQRKTHAGKYKVQLSNVFGTV-D 187 (197)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCC-----SSEEEEECSSE-EEEEESSCCHHHHCEEEEEEEECSSCEE-E
T ss_pred ecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC-----CceEEEEcCCE-EEEEEccccchhhCceEEEEEEcCcCce-E
Confidence 467999999999999999999999999877632 12222222222 2234566664 89999999999999887 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 188 ~~~~l~V~ 195 (197)
T 3lcy_A 188 AILDVEIQ 195 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 56666664
No 106
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=4.2e-11 Score=64.92 Aligned_cols=79 Identities=27% Similarity=0.416 Sum_probs=55.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+. .|.|.+.|+|++..+... ........+.. ....|..++..|.|.|.|.+.+. .
T Consensus 22 ~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-----~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~a~~~-----~ 89 (102)
T 2eo1_A 22 QAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS-----SKVRVEAVGCT-RRLVVQQAGQAEAGEYSCEAGGQ-----Q 89 (102)
T ss_dssp EEETTCCEEECCBCS-CSSSCCEEEETTEECCCC-----SSEEEEEETTE-EEEEETTCCTTTCSCEEEEETTE-----E
T ss_pred EEeCCCcEEEEEEec-CCCCceEEEECCEECCCC-----CCEEEEEcCCE-EEEEECCCCcccCEEEEEEcCCC-----c
Confidence 467899999999997 788999999999887532 12222222222 22356788999999999988542 3
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..++
T Consensus 90 ~~~~l~V~~p~ 100 (102)
T 2eo1_A 90 LSFRLQVAGQC 100 (102)
T ss_dssp CCEEEEEESCC
T ss_pred EEEEEEEeCCC
Confidence 45677776654
No 107
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.26 E-value=1.3e-10 Score=74.09 Aligned_cols=84 Identities=25% Similarity=0.470 Sum_probs=55.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCc-cCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKE-QDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.|.+.|+|+|..+... .........+... ...|..++. .|.|.|.|.+.|..|..
T Consensus 17 ~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~----~~~~~~~~~~~~~-~L~i~~~~~~~D~G~Y~C~a~n~~g~~- 90 (304)
T 2yd9_A 17 IGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ----RFETIEFDESAGA-VLRIQPLRTPRDENVYECVAQNSVGEI- 90 (304)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEC-------CT----TEEEEEETTTTEE-EEEECSCCTTTTCSEEEEEEECSSCEE-
T ss_pred EecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC----ceEEEEecCCCce-EEEEecccccCCCeEEEEEEECCCCeE-
Confidence 4678999999999999999999999999876421 1111122333222 234567787 99999999999998875
Q ss_pred eeeEEEEEEee
Q psy8666 81 SRNATLQVAVV 91 (124)
Q Consensus 81 ~~~~~l~v~~~ 91 (124)
+..+.|.|...
T Consensus 91 ~~~~~l~V~~~ 101 (304)
T 2yd9_A 91 TVHAKLTVLRE 101 (304)
T ss_dssp CCEEEEEEECG
T ss_pred EEEEEEEEecc
Confidence 56788888765
No 108
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.26 E-value=4.8e-11 Score=70.88 Aligned_cols=76 Identities=36% Similarity=0.734 Sum_probs=56.5
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
..|+.+.|.|.+.+.|.|.+.|+++|..+... ...... ....+ .|..++.+|.|.|.|.+.|..|.. ..
T Consensus 111 ~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~-----~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~g~~-~~ 180 (189)
T 2v5t_A 111 ERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-----EKYILKGSNTEL----TVRNIINSDGGPYVCRATNKAGED-EK 180 (189)
T ss_dssp TSCCCEEEECEEEEESCCEEEEEETTEECCCS-----SSEEEETTTTEE----EECSCCGGGCEEEEEEEEETTEEE-EE
T ss_pred cCCCcEEEEEEEccCCCCeEEEEECCEECcCC-----CcEEEecCCCEE----EEcCCChhhCeeEEEEEEeCCCce-eE
Confidence 46999999999999999999999999877632 122222 22333 345668999999999999999887 45
Q ss_pred eEEEEEE
Q psy8666 83 NATLQVA 89 (124)
Q Consensus 83 ~~~l~v~ 89 (124)
.+.|.|.
T Consensus 181 ~~~l~V~ 187 (189)
T 2v5t_A 181 QAFLQVF 187 (189)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6666654
No 109
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.25 E-value=2.7e-11 Score=72.32 Aligned_cols=82 Identities=20% Similarity=0.323 Sum_probs=60.2
Q ss_pred Eec-CCCEEEEEeeeccCC--CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 3 VAK-NEPVTLNCKAEGKPE--PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 3 ~~~-G~~~~l~C~~~~~p~--p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+.+ |+.+.|.|.+.+.|. +.+.|+|++..+..... .... ....|..++..|.|.|.|.+.|. +..
T Consensus 14 v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~-------~~~~----~~L~i~~~~~~d~G~Y~C~~~n~-~~~ 81 (190)
T 2wv3_A 14 IRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK-------NASN----MEYRINKPRAEDSGEYHCVYHFV-SAP 81 (190)
T ss_dssp CCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB-------CCSE----EEEEESSCCGGGCEEEEEEEEET-TEE
T ss_pred EccCCceEEEEEEeccCCCCceEEEEEECCEECcccce-------Eecc----EEEEEecCCcccCEEEEEEEEeC-Ccc
Confidence 344 999999999988876 78999999987763210 0011 22345777999999999999998 655
Q ss_pred eeeeEEEEEEeeeeeeee
Q psy8666 80 VSRNATLQVAVVIFFISF 97 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~ 97 (124)
+..+.|.|..+|.+...
T Consensus 82 -~~~~~l~V~~~p~~~~~ 98 (190)
T 2wv3_A 82 -KANATIEVKAAPDITGH 98 (190)
T ss_dssp -EEEEEEEEECCCEEEEE
T ss_pred -cccEEEEEecCCccccc
Confidence 66788888887766543
No 110
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.25 E-value=6.1e-11 Score=77.96 Aligned_cols=86 Identities=27% Similarity=0.539 Sum_probs=65.7
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+|++..+... ..........+ .|..++..|.|.|.|.+.|..|.. +.
T Consensus 234 ~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~g~~-~~ 303 (404)
T 3p3y_A 234 VLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD-----KAKFENFNKAL----RITNVSEEDSGEYFCLASNKMGSI-RH 303 (404)
T ss_dssp EETTSCEEEECCBCCSSCCEEEEEETTBCCCTT-----TEEEEGGGTEE----EESSCCGGGCEEEEEEEECSSCEE-EE
T ss_pred EecCCCEEEEEEECCCCCCcEEEEECCEECCCC-----cccccccCceE----EEccCCHhHCEEEEEEEEeCCCcE-EE
Confidence 567999999999999999999999999876532 12222233333 356669999999999999999886 66
Q ss_pred eEEEEEEeeeeeeeec
Q psy8666 83 NATLQVAVVIFFISFF 98 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~~ 98 (124)
.+.|.|..+|.+...+
T Consensus 304 ~~~l~V~~~p~~~~~~ 319 (404)
T 3p3y_A 304 TISVRVKAAPYWLDEP 319 (404)
T ss_dssp EEEEEEEEEEEEEECC
T ss_pred EEEEEEeCCCeeeccC
Confidence 8888888887665443
No 111
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.24 E-value=2.6e-11 Score=76.61 Aligned_cols=80 Identities=35% Similarity=0.689 Sum_probs=57.8
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.|.|.+.|+++|..+... ....... ...+ .|..+...|.|.|.|.+.|..|.. .
T Consensus 206 ~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~N~~G~~-~ 275 (291)
T 2wim_A 206 AERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-----EKYILKGSNTEL----TVRNIINSDGGPYVCRATNKAGED-E 275 (291)
T ss_dssp SSSCCEEEEECBCCCBSCCEEEEEETTEECCCT-----TTEEECSTTCEE----EEESCCSTTCEEEEEEEEETTEEE-E
T ss_pred ecCCCeEEEEEEeecCCCCeEEEEECCEECcCC-----ccEEEcCCccEE----EEeeCCcccCEEEEEEEEECCCce-e
Confidence 356899999999999999999999999877632 1222222 2233 345668999999999999999988 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|..++
T Consensus 276 ~~~~l~v~~~~ 286 (291)
T 2wim_A 276 KQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEC----
T ss_pred eeEEEEEEEec
Confidence 67777776654
No 112
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.24 E-value=1.2e-10 Score=70.83 Aligned_cols=88 Identities=18% Similarity=0.263 Sum_probs=58.9
Q ss_pred EEecCCCEEEEEeeeccCC--CeEEEEeCCEEeeccCCCCCc-eEEEcc-C----CcEEEEEEEcCCCccCCeEEEEEeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPE--PTIEWYKDGELVETSKSDAKS-QRVILP-T----GSLFFLRVVHGKKEQDGGVYWCLAR 73 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~--p~v~w~k~g~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~i~~~~~~d~g~y~C~~~ 73 (124)
.+..|+.+.|.|.+.+.|. +.+.|++++..+.... . ...... . ........|.+++.+|.|.|.|.+.
T Consensus 116 ~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 191 (213)
T 2x1w_L 116 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK----LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 191 (213)
T ss_dssp EEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEE----EEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEE----EeccccccccCccceeeeEEEEECCCCcccCEEEEEEEe
Confidence 5678999999999988653 4799999887533110 0 000000 0 1122345678889999999999999
Q ss_pred eCCccceeeeEEEEEEeeeee
Q psy8666 74 NSVGTAVSRNATLQVAVVIFF 94 (124)
Q Consensus 74 ~~~~~~~~~~~~l~v~~~~~~ 94 (124)
|..|.. +..+.|.|...|.+
T Consensus 192 N~~g~~-~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 192 SGLMTK-KNSTFVRVHEDPIE 211 (213)
T ss_dssp CSSCEE-EEEEEEEEEC----
T ss_pred cCCCcE-EEEEEEEEeccccc
Confidence 999887 67888888877653
No 113
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.24 E-value=3.4e-11 Score=68.72 Aligned_cols=78 Identities=26% Similarity=0.327 Sum_probs=52.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCC---CC--CceEEE--ccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKS---DA--KSQRVI--LPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~---~~--~~~~~~--~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++..+..... .. ...... ...........|.+++.+|.|.|.|.+.|
T Consensus 32 ~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 111 (137)
T 3qr2_A 32 QRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASN 111 (137)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEe
Confidence 467899999999999999999999997654321100 00 001111 01111223445678899999999999999
Q ss_pred CCccc
Q psy8666 75 SVGTA 79 (124)
Q Consensus 75 ~~~~~ 79 (124)
..|..
T Consensus 112 ~~G~~ 116 (137)
T 3qr2_A 112 DPDRN 116 (137)
T ss_dssp CTTSS
T ss_pred cCCcc
Confidence 98876
No 114
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.24 E-value=2.1e-11 Score=80.24 Aligned_cols=80 Identities=31% Similarity=0.560 Sum_probs=60.4
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+++|..+... ..........+ .|..+..+|.|.|.|.+.|..|.. ..
T Consensus 324 ~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~G~~-~~ 393 (403)
T 3laf_A 324 AYESMDIEFECAVSGKPVPTVNWMKNGDVVIPS-----DYFQIVGGSNL----RILGVVKSDEGFYQCVAENEAGNA-QS 393 (403)
T ss_dssp CCTTCCEEECCEEEEESCCEEEEEETTEECCCS-----SSEEEETTTEE----EESSCCGGGCEEEEEEEEETTEEE-EE
T ss_pred EecCCeEEEEEEEeeccCCEEEEEECCEECCCC-----CcEEEecCccE----EEeccccccCEEEEEEEEcCCceE-EE
Confidence 457999999999999999999999999876532 12222333333 356668999999999999999988 56
Q ss_pred eEEEEEEeee
Q psy8666 83 NATLQVAVVI 92 (124)
Q Consensus 83 ~~~l~v~~~~ 92 (124)
.+.|.|..||
T Consensus 394 ~~~l~V~~P~ 403 (403)
T 3laf_A 394 SAQLIVPKPA 403 (403)
T ss_dssp EEEEECCCC-
T ss_pred EEEEEEeCCC
Confidence 7777776553
No 115
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.24 E-value=1.2e-10 Score=68.88 Aligned_cols=75 Identities=13% Similarity=0.313 Sum_probs=56.2
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.+++ .+.|+|+|..+... .....+ .|..++.+|.|.|.|.+.|..+...
T Consensus 99 ~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~----------~~~~~L----~i~~v~~~d~G~Y~C~a~n~~~~~~ 164 (175)
T 1fnl_A 99 VFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF----------HHNSDF----HIPKATLKDSGSYFCRGLVGSKNVS 164 (175)
T ss_dssp EEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE----------EECCCE----EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC----------CCCCEE----EEcccChhhCeEEEEEEEcCCCCcc
Confidence 35689999999999877654 89999999876521 123344 3566699999999999999876655
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 165 s~~~~l~V~~ 174 (175)
T 1fnl_A 165 SETVNITITQ 174 (175)
T ss_dssp CCCEEEEEEC
T ss_pred CccEEEEEeC
Confidence 6677777654
No 116
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.24 E-value=2.8e-10 Score=68.32 Aligned_cols=81 Identities=19% Similarity=0.187 Sum_probs=55.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc-cce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG-TAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~-~~~ 80 (124)
.+..|+.+.|.|.+.+ +.+.+.|+|++..+... .......... ....|..++.+|.|.|.|.+.|..+ ...
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~------~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD------RQNPLEPKNK-ARFSIPSMTEDYAGRYRCYYRSPVGWSQP 86 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE------EECCCSSSSE-EEEEESSCCGGGCEEEEEEEEETTEEBCC
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc------ccccccCCce-EEEEeccCCcccCceEEEEEeCCCcccCC
Confidence 3678999999999888 77899999998765421 0000011111 2234677899999999999999887 233
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 87 s~~~~l~V~~ 96 (196)
T 3p2t_A 87 SDPLELVMTG 96 (196)
T ss_dssp CCCEEEEEEC
T ss_pred CccEEEEecC
Confidence 5667777753
No 117
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.23 E-value=3.5e-10 Score=67.24 Aligned_cols=84 Identities=25% Similarity=0.383 Sum_probs=56.1
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeC--CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKD--GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+..|+.+.|.|.+.+.|.|.+.|+++ +..+................... ....|..++.+|.|.|.|.+.|..|..
T Consensus 106 ~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~- 183 (192)
T 2va4_A 106 TYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGS-SSLHIKDVKLSDSGRYDCEAASRIGGH- 183 (192)
T ss_dssp ECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTE-EEEEEESCCGGGCEEEEEEEECSSCEE-
T ss_pred EEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCc-eEEEEecCCcccCEEEEEEEEecCCce-
Confidence 45689999999999999999999998 55544321111122221111111 223456678999999999999999886
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
...+.|.|
T Consensus 184 ~~~~~l~V 191 (192)
T 2va4_A 184 QKSMYLDI 191 (192)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 55666665
No 118
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.23 E-value=1.4e-10 Score=71.42 Aligned_cols=92 Identities=24% Similarity=0.299 Sum_probs=59.2
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEe----CCEEeeccCCCCCce--EEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYK----DGELVETSKSDAKSQ--RVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k----~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..|+.+.|.|.+.+.|.|.+.|++ ++..+.......... ..............|..++..|.|.|.|.+.|..
T Consensus 126 ~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 205 (241)
T 3grw_A 126 AVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFI 205 (241)
T ss_dssp CCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred ecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCc
Confidence 4568999999999999999999999 776554321111000 0111112223344567779999999999999999
Q ss_pred ccceeeeEEEEEEeeeeee
Q psy8666 77 GTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~~ 95 (124)
|.. +..+.|.|..+|...
T Consensus 206 g~~-~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 206 GVA-EKAFWLSVHGPRAAE 223 (241)
T ss_dssp CEE-EEEEEEEC-------
T ss_pred ceE-EEEEEEEecCCCCCC
Confidence 988 668888888776544
No 119
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.23 E-value=9.4e-11 Score=71.16 Aligned_cols=78 Identities=13% Similarity=0.283 Sum_probs=56.9
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+. |.+.+.|+|+|..+... .....+ .|..++.+|.|.|.|.+.|..+...
T Consensus 99 ~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~----------~~~~~L----~i~~v~~~D~G~Y~C~a~n~~~~~~ 164 (204)
T 3sgj_C 99 VFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF----------HHNSDF----YIPKATLKDSGSYFCRGLVGSKNVS 164 (204)
T ss_dssp EEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE----------EECCCE----EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc----------cCCceE----EECcCCcccCEEEEEEEEeCCCcee
Confidence 46689999999999665 56889999999876421 123333 3566699999999999999655545
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
+..+.|.|..++.
T Consensus 165 s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 165 SETVQITITQGLA 177 (204)
T ss_dssp CCCEEEEEEC---
T ss_pred cCcEEEEEeCcCC
Confidence 7788888877654
No 120
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.23 E-value=4.8e-11 Score=70.91 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=57.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+. .....+ .|..++.+|.|.|.|.+.|..+.. +
T Consensus 108 ~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~------------~~~~~L----~i~~v~~~d~G~Y~C~a~n~~~~~-~ 170 (184)
T 2ny1_B 108 HLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI------------QGGKTL----SVSQLELQDSGTWTCTVLQNQKKV-E 170 (184)
T ss_dssp EEETTCCEEEEEECCTTCCCEEEEECTTSCEE------------EESSEE----EESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred eeecCCCEEEEEEcCCCCCCEEEEEeCCCccc------------cCceEE----EEecCCcCCCeEEEEEEEECCceE-E
Confidence 46789999999999888999999999875432 122333 356669999999999999987776 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|...|.
T Consensus 171 ~~~~l~V~~~p~ 182 (184)
T 2ny1_B 171 FKIDIVVLAFQK 182 (184)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEEEecCC
Confidence 677777776553
No 121
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.23 E-value=1.1e-10 Score=74.66 Aligned_cols=86 Identities=14% Similarity=0.241 Sum_probs=60.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCC------cEEEEEEEcCCCccC-CeEEEEEeEeC
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTG------SLFFLRVVHGKKEQD-GGVYWCLARNS 75 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~d-~g~y~C~~~~~ 75 (124)
+..|+.+.|.|.+.+.|.|.+.|+++|..+..........+...... .......|..++.+| .|.|.|.+.|.
T Consensus 221 ~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~ 300 (315)
T 1itb_B 221 VDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNT 300 (315)
T ss_dssp CCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECT
T ss_pred EeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecC
Confidence 56899999999999999999999999988764311100111111111 122344567889999 99999999999
Q ss_pred CccceeeeEEEEEE
Q psy8666 76 VGTAVSRNATLQVA 89 (124)
Q Consensus 76 ~~~~~~~~~~l~v~ 89 (124)
.|.. ...+.|.|.
T Consensus 301 ~G~~-~~~~~l~v~ 313 (315)
T 1itb_B 301 HGID-AAYIQLIYP 313 (315)
T ss_dssp TCCE-EEEEEEECC
T ss_pred CCce-eEEEEEEec
Confidence 9988 456666653
No 122
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.2e-10 Score=75.72 Aligned_cols=84 Identities=17% Similarity=0.223 Sum_probs=59.4
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEcc----CCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILP----TGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.+.|.+.|.|.|.+.|+++|..+.... ........ .........|..++.+|.|.|.|.+.|..|..
T Consensus 259 ~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~---~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 335 (347)
T 2ifg_A 259 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETS---FIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 335 (347)
T ss_dssp EESSSEEEEEEEEEESCCEEEEEETTEECCCCS---SEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ccCceEEEEEEeeecCCCcEEEEeCCEECCCCc---ceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCce
Confidence 468999999999999999999999998876321 01111111 11122234567779999999999999999987
Q ss_pred eeeeEEEEEEee
Q psy8666 80 VSRNATLQVAVV 91 (124)
Q Consensus 80 ~~~~~~l~v~~~ 91 (124)
+..+.|.|..+
T Consensus 336 -~~~~~l~V~~~ 346 (347)
T 2ifg_A 336 -SASIMAAFMDN 346 (347)
T ss_dssp -EEEEEECSCCC
T ss_pred -eeEEEEEecCC
Confidence 55667766544
No 123
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.22 E-value=3.1e-10 Score=68.15 Aligned_cols=81 Identities=19% Similarity=0.237 Sum_probs=54.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc-e
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA-V 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~-~ 80 (124)
.+.+|+++.|.|.+.+.|. .+.|+|++..+... .......... ....|..++..|.|.|.|.+.|..+.. .
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~------~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWD------TQNPLEPKNK-ARFSIPSMTEHHAGRYRCYYYSPAGWSEP 86 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSE------EECCCSSTTE-EEEEESSCCGGGCEEEEEEEEETTEECBC
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcc------cccccCCccc-cEEEeccCChhHCeEEEEEEeCCCCcCCc
Confidence 4678999999999987665 89999998765421 0000001111 223467779999999999999987643 2
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 87 s~~~~l~V~~ 96 (196)
T 2d3v_A 87 SDPLELVVTG 96 (196)
T ss_dssp CCCEEEEEEC
T ss_pred CccEEEEecC
Confidence 4567777766
No 124
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.22 E-value=3e-11 Score=81.59 Aligned_cols=81 Identities=32% Similarity=0.611 Sum_probs=59.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.+.|.+.|.|.|.+.|+|++..+.... ..........+.+ .|..++.+|.|.|.|.|.|..|.. +
T Consensus 396 ~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~--~~~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~g~~-~ 468 (477)
T 2id5_A 396 FVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAK--SNGRLTVFPDGTL----EVRYAQVQDNGTYLCIAANAGGND-S 468 (477)
T ss_dssp EEETTCCEEECCCEEEESCCEEEEECTTSCBC---------CEECTTSCE----EESSCCSTTCEEEEEEEEETTEEE-E
T ss_pred EEeCCCeEEEEEeccccCCCEEEEEECCccccccC--CCceEEeCCCCEE----EEeeCChHHCEEEEEEEEeCCCcE-E
Confidence 46789999999999999999999999987654211 1122223344444 456779999999999999999887 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.+.|.
T Consensus 469 ~~~~l~V~ 476 (477)
T 2id5_A 469 MPAHLHVR 476 (477)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 56666663
No 125
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.22 E-value=5.8e-10 Score=67.87 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=50.0
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|.+. +.|.|.+.|+|+|..+.... ...... ..........|.+++.+|.|.|.|.+.|
T Consensus 13 ~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~---~~~~~~-~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 13 EILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP---KYKMHI-DRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp EECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSS---SCEEEE-CTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred EEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCC---CEEEEE-eCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 467899999999986 46999999999999886421 112112 2212233345788899999999999999
No 126
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.22 E-value=2e-11 Score=83.73 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=62.7
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+|+|..+.... . .......+. |..++.+|.|.|.|.+.|..|.. ..
T Consensus 338 v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~-----~-~~~~~~~L~----I~~v~~~D~G~YtC~A~N~~g~~-~~ 406 (527)
T 3qs9_E 338 IDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ-----K-GLDNGYSIS----KFCNHKHQPGEYIFHAENDDAQF-TK 406 (527)
T ss_dssp CCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC-----C-BCSSSSEEE----EECCCTTCCSCEEEEEEETTEEE-EE
T ss_pred EcCCCeEEEEEEEEecCCCEEEEEECCEECcCCc-----c-cccCCcEEE----EecCCcccCEEEEEEEEeCCCcE-EE
Confidence 4568999999999999999999999999886431 1 111223332 45569999999999999999987 55
Q ss_pred eEEEEEEeeeeeeee
Q psy8666 83 NATLQVAVVIFFISF 97 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~ 97 (124)
.+.|.|..+|.+...
T Consensus 407 ~~~L~V~~~P~i~~~ 421 (527)
T 3qs9_E 407 MFTLNIRRKPQVLAE 421 (527)
T ss_dssp EEEEC--CCCEEEEC
T ss_pred EEEEEEecCCeEEEe
Confidence 788999888876544
No 127
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.21 E-value=3.7e-10 Score=71.26 Aligned_cols=91 Identities=15% Similarity=0.361 Sum_probs=62.0
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEe-CCEEeeccCCCCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYK-DGELVETSKSDAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k-~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.+.| .+.+.|++ +|..+.... ....... .... ....|..++..|.|.|.|.+.|..+.
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~----~~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~~~n~~g~ 87 (291)
T 1qz1_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ----QRISVVWNDDDS-STLTIYNANIDDAGIYKCVVTAEDGT 87 (291)
T ss_dssp EEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSC----SSEEEEEEETTE-EEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred eEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCC----ceEEEEEcCCCe-EEEEEecCCCCCCEEEEEEEEcCCCC
Confidence 467899999999998876 68999999 776654211 1111111 1111 22345777999999999999998876
Q ss_pred ceeeeEEEEEEeeeeeeee
Q psy8666 79 AVSRNATLQVAVVIFFISF 97 (124)
Q Consensus 79 ~~~~~~~l~v~~~~~~~~~ 97 (124)
..+..+.|.|..+|.+...
T Consensus 88 ~~~~~~~l~v~~~~~~~~~ 106 (291)
T 1qz1_A 88 QSEATVNVKIFQKLMFKNA 106 (291)
T ss_dssp EEEEEEEEEEECCSEEEEC
T ss_pred eeEEEEEEEeeccccccCC
Confidence 5466777777766655433
No 128
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.21 E-value=1.4e-10 Score=69.05 Aligned_cols=71 Identities=21% Similarity=0.454 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+.... .........+.+ .|..++.+|.|.|.|.+.|..+..
T Consensus 107 ~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~---~~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~~~~ 177 (189)
T 2v44_A 107 EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIS---DNRFAMLANNNL----QILNINKSDEGIYRCEGRVEARGE 177 (189)
T ss_dssp EEETTSCEEECCEEECSSCCEEEEEEEC--CEECC---CTTEEECTTSCE----EETTCCGGGCEEEEEEEEETTTTE
T ss_pred EEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccC---CCCEEEecCCcE----EEEEcCcccCeEEEEEEEccccCc
Confidence 35689999999999999999999999988765321 122333344444 356679999999999999988654
No 129
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.21 E-value=2.2e-10 Score=75.34 Aligned_cols=87 Identities=22% Similarity=0.470 Sum_probs=65.5
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+.... ..........+ .|..++..|.|.|.|.+.|..|.. +.
T Consensus 233 ~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~----~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~g~~-~~ 303 (403)
T 3laf_A 233 AIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRS----KKYSLLGGSNL----LISNVTDDDSGTYTCVVTYKNENI-SA 303 (403)
T ss_dssp EETTSCEEECCEEEEESCCEEEEEETTEECCCSS----SSEEEETTTEE----EECSCCGGGCEEEEEEEEETTEEE-EE
T ss_pred ecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCC----ceEEECCccEE----EEeCCCHHHCEEEEEEEEcCCCce-EE
Confidence 4579999999999999999999999998765321 22222333333 356669999999999999998876 67
Q ss_pred eEEEEEEeeeeeeeec
Q psy8666 83 NATLQVAVVIFFISFF 98 (124)
Q Consensus 83 ~~~l~v~~~~~~~~~~ 98 (124)
.+.|.|..+|.+...+
T Consensus 304 ~~~l~V~~~p~~~~~~ 319 (403)
T 3laf_A 304 SAELTVLVPPWFLNHP 319 (403)
T ss_dssp EEEEEEEEEEEEEECC
T ss_pred EEEEEEECCCcEeecC
Confidence 8888888887665443
No 130
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.20 E-value=8.5e-11 Score=76.95 Aligned_cols=77 Identities=29% Similarity=0.542 Sum_probs=59.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|+|..+... ... ....+.+ .|..+..+|.|.|.|.+.|..|.. .
T Consensus 305 ~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~-~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~G~~-~ 373 (382)
T 1cs6_A 305 EADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ-----NRI-EVSGGEL----RFSKLVLEDSGMYQCVAENKHGTV-Y 373 (382)
T ss_dssp EEETTCCEEEECEEEEESCCEEEEEETTEECCCC-----SSE-EEETTEE----EESSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC-----ceE-EEECCEE----EECcCCcccCEEEEEEEEeCCCeE-E
Confidence 3567999999999999999999999999887632 111 2223333 456678999999999999999987 5
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 374 ~~~~l~V~ 381 (382)
T 1cs6_A 374 ASAELTVQ 381 (382)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 56777664
No 131
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=2.3e-10 Score=62.45 Aligned_cols=67 Identities=18% Similarity=0.363 Sum_probs=48.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|.+ +.|.+.+.|+|+|..+.... ........+.. ....|.+++.+|.|.|.|.+.+
T Consensus 27 ~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 27 QVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG----SKYIFESIGAK-RTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp EEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCS----SSSEEEEETTE-EEEEECSCSSSSCEEEEEEETT
T ss_pred EEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCC----CeEEEEecCCE-EEEEECCCCcccCEEEEEEECC
Confidence 46789999999999 68889999999998876420 11222223322 2345678899999999999844
No 132
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.20 E-value=7.6e-11 Score=69.69 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=57.9
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+. +.|.+.+.|+|+|..+... .....+ .|..++.+|.|.|.|.+.|..+...
T Consensus 96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----------~~~~~L----~i~~v~~~d~G~Y~C~a~n~~~~~~ 161 (176)
T 1f2q_A 96 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW----------YENHNI----SITNATVEDSGTYYCTGKVWQLDYE 161 (176)
T ss_dssp EEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC----------CCSSEE----EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee----------cCCCeE----EECCCCcccCEEEEEEEEeCCcceE
Confidence 356899999999994 5667799999999876421 112222 3566799999999999999765555
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
+..+.|.|..+|.
T Consensus 162 s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 162 SEPLNITVIKAPR 174 (176)
T ss_dssp CCCEEEEEECSCC
T ss_pred ecCEEEEEecCCC
Confidence 6678888877653
No 133
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.20 E-value=2.8e-10 Score=78.79 Aligned_cols=80 Identities=24% Similarity=0.358 Sum_probs=61.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+++.|.|.+.|.|.|.++|+|+++.+... .+......+... ...|..+.+.|.|.|.|.+.|..|.. +
T Consensus 493 ~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s-----~~~~i~~~~~~~-~L~I~~~~~~D~G~Yt~~A~N~~G~~-~ 565 (573)
T 3uto_A 493 EVGEGQSANFYCRVIASSPPVVTWHKDDRELKQS-----VKYMKRYNGNDY-GLTINRVKGDDKGEYTVRAKNSYGTK-E 565 (573)
T ss_dssp EECTTSCEEEEEEEECSSCCEEEEEETTEECCSS-----SSEEEEEETTEE-EEEECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEeCCCcEEEEEEEEccCCCeEEEEECCEEcccC-----CcEEEEEcCCEE-EEEEcCCCcccCcEEEEEEEeCCCcE-E
Confidence 4678999999999999999999999999988643 222233333333 34567889999999999999999988 5
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 566 ~~v~l~V 572 (573)
T 3uto_A 566 EIVFLNV 572 (573)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5666655
No 134
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.20 E-value=4.5e-10 Score=71.40 Aligned_cols=86 Identities=28% Similarity=0.432 Sum_probs=62.2
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcC-CCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHG-KKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+... .............+ .+.. ++..|.|.|.|.+.|..|.. .
T Consensus 116 ~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~~~~~~~~~~l-~i~~~~~~~d~G~Y~C~a~N~~G~~-~ 188 (305)
T 2nzi_A 116 ALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-----GHYQVIVTRSFTSL-VFPNGVERKDAGFYVVCAKNRFGID-Q 188 (305)
T ss_dssp EETTCCEEEEEEEEEESCCEEEEEESSSBCCSS-----SSCEEEECSSEEEE-EETTCCCSTTCEEEEEEEEETTEEE-E
T ss_pred ecCCCEEEEEEEECCCCCCEEEEEECCEECCCC-----CcEEEEEcCCceEE-EEecCCccCccEEEEEEEEeCCCce-e
Confidence 567999999999999999999999998766532 11122222222222 3455 78999999999999999987 5
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
..+.|.|...|..+
T Consensus 189 ~~~~l~v~~~P~~p 202 (305)
T 2nzi_A 189 KTVELDVADVPDPP 202 (305)
T ss_dssp EEEEEEEEBCCCCC
T ss_pred eEEEEEEecCCCCC
Confidence 67788887665433
No 135
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.20 E-value=1.8e-10 Score=69.93 Aligned_cols=78 Identities=23% Similarity=0.449 Sum_probs=57.5
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+. +.|+|+|..+... ...+ .|..++..|.|.|.|.+.|...
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~------------~~~L----~i~~v~~~D~G~Y~C~a~n~~~--- 78 (204)
T 3sgj_C 18 RVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ------------ASSY----FIDAATVDDSGEYRCQTQLSTL--- 78 (204)
T ss_dssp EEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC------------SSEE----EESSCCGGGCEEEEEEETTSBC---
T ss_pred EEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC------------ccEE----EEecccccCCEEEEEEeCCCcc---
Confidence 577899999999999888776 9999999876531 1222 3566799999999999987432
Q ss_pred eeeEEEEEEeeeeeeeec
Q psy8666 81 SRNATLQVAVVIFFISFF 98 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~~~~ 98 (124)
+..+.|.|...+.+...+
T Consensus 79 s~~~~l~V~~~p~~~~~~ 96 (204)
T 3sgj_C 79 SDPVQLEVHIGWLLLQAP 96 (204)
T ss_dssp CCCEEEEEECSSEEEECS
T ss_pred cccEEEEEecCceEecCC
Confidence 446777777665444333
No 136
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=70.34 Aligned_cols=79 Identities=14% Similarity=0.209 Sum_probs=54.1
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceeee
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSRN 83 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 83 (124)
..|..+.+.|.+.+.|.|.+.|++++..+... ................|..++..|.|.|.|.+.|..|.. ...
T Consensus 131 ~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~-----~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~-~~~ 204 (218)
T 4frw_A 131 GQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS-----RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQ-DQR 204 (218)
T ss_dssp TCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE-----EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSS-CEE
T ss_pred eeccccceeeeccCCcCceEEEEECCcccccC-----ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCe-EEE
Confidence 35777899999999999999999998776532 111111111222334566778999999999999998876 334
Q ss_pred EEEEE
Q psy8666 84 ATLQV 88 (124)
Q Consensus 84 ~~l~v 88 (124)
+.+.+
T Consensus 205 ~t~~v 209 (218)
T 4frw_A 205 ITHIL 209 (218)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 44444
No 137
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.19 E-value=5.4e-11 Score=72.63 Aligned_cols=76 Identities=20% Similarity=0.407 Sum_probs=59.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|++++..+... .... ..|..++..|.|.|.|.+.|..|...+
T Consensus 129 ~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-----------~~~~----L~i~~v~~~d~G~Y~C~a~n~~g~~~s 193 (218)
T 3k0w_A 129 KLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----------TKKL----YMVPYVDLEHQGTYWCHVYNDRDSQDS 193 (218)
T ss_dssp EECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----------CSSE----EEESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred eecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----------CCCE----EEEeecChhcCEEEEEEEEcCCCCcee
Confidence 3567999999999999999999999999876532 1122 235677899999999999999888667
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|....
T Consensus 194 ~~~~l~V~~~~ 204 (218)
T 3k0w_A 194 KKVEIIIDELN 204 (218)
T ss_dssp CCEEEEECC--
T ss_pred eeEEEEEeCCc
Confidence 78888886643
No 138
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.18 E-value=7.9e-11 Score=77.18 Aligned_cols=89 Identities=27% Similarity=0.432 Sum_probs=61.7
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccC-CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSK-SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.|.|.+.|+|++....... ...... .....+.+ .|..++..|.|.|.|.+.|..|.. +
T Consensus 224 v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~-~ 297 (388)
T 2v5m_A 224 LMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDR-VKQVSGTL----IIKDAVVEDSGKYLCVVNNSVGGE-S 297 (388)
T ss_dssp EETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSS-EEEETTEE----EESSCCGGGCEEEEEEEECSSCEE-E
T ss_pred EeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCc-eecccCEE----EECcCCHHHCeEEEEEEecCCCce-e
Confidence 4578999999999999999999999754321100 000111 11223333 456779999999999999999886 6
Q ss_pred eeEEEEEEeeeeeeee
Q psy8666 82 RNATLQVAVVIFFISF 97 (124)
Q Consensus 82 ~~~~l~v~~~~~~~~~ 97 (124)
..+.|.|..+|.+...
T Consensus 298 ~~~~l~V~~~p~~~~~ 313 (388)
T 2v5m_A 298 VETVLTVTAPLSAKID 313 (388)
T ss_dssp EEEEEEEEEEEEEEEE
T ss_pred EEEEEEEeCCCccccC
Confidence 6888888887765443
No 139
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.18 E-value=5.8e-10 Score=76.74 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=63.7
Q ss_pred EEecCCCEEEEEeee----ccCCCeEEEEeCCEEeeccCCCCC-ceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAE----GKPEPTIEWYKDGELVETSKSDAK-SQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~----~~p~p~v~w~k~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+. +.|.|.+.|+|+|..+........ ................|..++.+|.|.|.|.+.|..
T Consensus 453 ~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 532 (585)
T 2ocw_A 453 TAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGH 532 (585)
T ss_pred eEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCC
Confidence 467899999999986 667888999999987653211110 111111212222334567779999999999999999
Q ss_pred ccceeeeEEEEEEeeee
Q psy8666 77 GTAVSRNATLQVAVVIF 93 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~ 93 (124)
|...+..+.|.|..+|.
T Consensus 533 G~~~~~~~~l~V~~~p~ 549 (585)
T 2ocw_A 533 FYGETAAVYVAVEERKA 549 (585)
T ss_pred CccEEEEEEEEEEeeee
Confidence 87766568888888773
No 140
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.18 E-value=2e-10 Score=62.79 Aligned_cols=78 Identities=22% Similarity=0.373 Sum_probs=53.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+. |.+.|+|++..+... ........+.. ....|.+++.+|.|.|.|.+.|. .
T Consensus 19 ~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~-----~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~n~-----~ 85 (108)
T 2dm7_A 19 EASEGATATLQCELSKV--APVEWKKGPETLRDG-----GRYSLKQDGTR-CELQIHDLSVADAGEYSCMCGQE-----R 85 (108)
T ss_dssp EEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS-----SSCEEEEETTE-EEEEESSCCTTTCSEEEEEETTE-----E
T ss_pred EEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC-----CCEEEEecCCE-EEEEECCCCcccCEEEEEEEcCC-----E
Confidence 57789999999998764 789999998766532 12222223332 22346788999999999998542 4
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
....|.|..+|
T Consensus 86 ~~~~l~V~~~p 96 (108)
T 2dm7_A 86 TSATLTVRALP 96 (108)
T ss_dssp EEEECEEECCC
T ss_pred EEEEEEEecCC
Confidence 46677776644
No 141
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.18 E-value=4e-12 Score=81.12 Aligned_cols=79 Identities=23% Similarity=0.378 Sum_probs=59.3
Q ss_pred EecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.|.|.| .+.|+|++..+.... ......+ .+|..++..|.|.|.|.|.|..|.. +
T Consensus 224 ~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~--------~~~~~~~---l~i~~v~~~d~G~Y~C~A~N~~G~~-~ 291 (308)
T 4fom_A 224 FVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL--------LASDNTL---HFVHPLTFNYSGVYICKVTNSLGQR-S 291 (308)
T ss_dssp ETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC--------BCSTTEE---ECCSCCCSCCCSEEEEEEEETTEEE-E
T ss_pred eeccccEEEEEEEecCCCCcEEEEEECCeECCCcE--------EEcCCeE---EEECCCChhhCEEEEEEEEeCCCcE-E
Confidence 4568889999999999988 599999887665321 1112222 2356678999999999999999987 6
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|+
T Consensus 292 ~~~~l~V~~~P~ 303 (308)
T 4fom_A 292 DQKVIYISDPPH 303 (308)
T ss_dssp EEEECCEECCC-
T ss_pred EEEEEEEEcCCC
Confidence 688888888775
No 142
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.18 E-value=5.3e-10 Score=67.71 Aligned_cols=81 Identities=12% Similarity=0.182 Sum_probs=56.8
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+.+|+.+.|.|.+.|.|.|.+.|+++..... ...... .+.... ..|.+++.+|.|.|.|.+.|..+.. +.
T Consensus 13 ~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~------~~~~~~--~~~~~~-L~I~~v~~~D~G~Y~C~a~n~~~~~-~~ 82 (202)
T 1vca_A 13 AQIGDSVSLTCSTTGCESPFFSWRTQIDSPL------NGKVTN--EGTTST-LTMNPVSFGNEHSYLCTATCESRKL-EK 82 (202)
T ss_dssp EETTSCEEEEEEEESCSSCEEEEEETTCCCC------SSEEEE--ETTEEE-EEESSCCGGGCSEEEEEEEETTEEE-EE
T ss_pred EcCCCcEEEEEeecCCCCCeEEEECCCCCCc------cceEEE--cCCccE-EEECcCCHHHCEEEEEEEEECCceE-ee
Confidence 4589999999999999999999998432110 011111 111111 3467789999999999999988765 66
Q ss_pred eEEEEEEeeee
Q psy8666 83 NATLQVAVVIF 93 (124)
Q Consensus 83 ~~~l~v~~~~~ 93 (124)
.+.|.|..+|.
T Consensus 83 ~~~l~V~~~p~ 93 (202)
T 1vca_A 83 GIQVEIYSFPK 93 (202)
T ss_dssp EEEEEEEBCCS
T ss_pred EEEEEEEeCCC
Confidence 78888877654
No 143
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.18 E-value=1.7e-10 Score=70.44 Aligned_cols=84 Identities=26% Similarity=0.457 Sum_probs=60.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+....... ..........+ .|..++..|.|.|.|.+.|..+.. .
T Consensus 30 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L----~i~~~~~~d~G~Y~C~~~n~~~~~-~ 103 (231)
T 3ojm_B 30 AVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG-GYKVRNQHWSL----IMESVVPSDKGNYTCVVENEYGSI-N 103 (231)
T ss_dssp EEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTT-CCEEEGGGTEE----EECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEccCCCEEEEEecccCCCCeEEEEECCcccccccccc-ceeeecCcceE----EEecCCcccCEEEEEEEecccCcc-c
Confidence 46789999999999999999999999998876432110 11122222333 356669999999999999988776 5
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
....|.|...
T Consensus 104 ~~~~l~V~~~ 113 (231)
T 3ojm_B 104 HTYHLDVVER 113 (231)
T ss_dssp EEEEEEEECC
T ss_pred ccEEEEEEcC
Confidence 5677777653
No 144
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.18 E-value=2.2e-10 Score=69.91 Aligned_cols=93 Identities=22% Similarity=0.226 Sum_probs=60.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe----CCEEeeccCCCCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK----DGELVETSKSDAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k----~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+.+.|.|.+.|++ +|..+............... .........|..++..|.|.|.|.+.|..
T Consensus 129 ~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 208 (231)
T 3ojm_B 129 STVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYI 208 (231)
T ss_dssp EEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEecc
Confidence 35679999999999999999999999 77655432110000000000 00000112356668999999999999999
Q ss_pred ccceeeeEEEEEEeeeeee
Q psy8666 77 GTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~~ 95 (124)
|.. +..+.|.|..+|..+
T Consensus 209 g~~-~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 209 GQA-NQSAWLTVLPKQQAP 226 (231)
T ss_dssp EEE-EEEEEEEEECCC---
T ss_pred ceE-eeEEEEEEecCCCCC
Confidence 987 678888887766543
No 145
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.17 E-value=9.7e-11 Score=76.86 Aligned_cols=75 Identities=29% Similarity=0.539 Sum_probs=57.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.|.|.|.+.|+++|..+... ... ...+. ..|..++.+|.|.|.|.+.|..|.. .
T Consensus 320 ~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~------~~~-~~~~~----L~i~~~~~~d~G~Y~C~a~N~~G~~-~ 387 (395)
T 1bih_A 320 VVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG------RAT-VTDSG----LVIKGVKNGDKGYYGCRATNEHGDK-Y 387 (395)
T ss_dssp EECTTSCEEEECEEEEESCCCCEEEETTEECCSS------SEE-EETTE----EEESSCCSTTCEEEEEEEEETTEEE-E
T ss_pred EecCCCeEEEEEEECcccCCeeEEEECCEECCCC------ceE-EECCE----EEEeeCCcccCEEEEEEEEccCCCc-e
Confidence 3568999999999999999999999999887531 221 22333 3456779999999999999999987 4
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.|.|
T Consensus 388 ~~~~l~V 394 (395)
T 1bih_A 388 FETLVQV 394 (395)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5666654
No 146
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.17 E-value=2.9e-10 Score=67.45 Aligned_cols=87 Identities=21% Similarity=0.370 Sum_probs=57.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc-e
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA-V 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~-~ 80 (124)
.+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..........+.+ .|..++..|.|.|.|.+.+..+.. .
T Consensus 13 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---~~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~~~~~~~~~~~ 85 (189)
T 2v5t_A 13 EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI---SDNRFAMLANNNL----QILNINKSDEGIYRCEGRVEARGEID 85 (189)
T ss_dssp EEETTSCEEECCEEECSSCCEEEEEC-----CBC---CCTTEEECTTSCE----EETTCCGGGCEEEEEEEEETTTTEEE
T ss_pred EEeCCCcEEEEEEEcCCCCCEEEEEECCccceec---cCCeEEEecCCCE----EEeeCCHhHCcEEEEEEEEcCCCceE
Confidence 4678999999999999899999999998766532 1122233344444 356669999999999999986433 2
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
...+.+.+..+|.+.
T Consensus 86 ~~~~~l~v~~~p~~~ 100 (189)
T 2v5t_A 86 FRDIIVIVNVPPAIS 100 (189)
T ss_dssp EEEEEEEEEEEEEEE
T ss_pred EEEEEEEecCCCCcc
Confidence 345566666666544
No 147
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.17 E-value=1.9e-09 Score=58.01 Aligned_cols=84 Identities=23% Similarity=0.319 Sum_probs=59.7
Q ss_pred EEecCCCEEEEEeeec-cCCCeEEEEeCC----EEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPTIEWYKDG----ELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~v~w~k~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|++.+ .+.|.++|-|-+ ..+.. .. .......+.+.+++. +..+-..|.|.|+|.+....
T Consensus 22 sv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~---~~-q~w~E~~N~s~fvLh-f~~V~~sDsGsYRCsAn~~s 96 (120)
T 2aw2_A 22 SILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLED---RQ-TSWKEEKNISFFILH-FEPVLPNDNGSYRCSANFQS 96 (120)
T ss_dssp EEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCS---SC-EEEEECSSCEEEEEE-ESSCCGGGCEEEEEEEEETT
T ss_pred eEecCCeEEEEccEEeccCCCceEEEecCCceEEECcc---cc-ccceecCCeeEEEEE-EeeeeEcCCcceEEEeeCCC
Confidence 4678999999999987 699999999844 23321 11 111222333344444 47778999999999999999
Q ss_pred ccceeeeEEEEEEe
Q psy8666 77 GTAVSRNATLQVAV 90 (124)
Q Consensus 77 ~~~~~~~~~l~v~~ 90 (124)
|..++....+.|..
T Consensus 97 g~ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 97 NLIESHSTTLYVTD 110 (120)
T ss_dssp EEEECCCEEEEEEC
T ss_pred CcEEeeEEEEEEEe
Confidence 98878887777754
No 148
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.17 E-value=4e-10 Score=71.78 Aligned_cols=81 Identities=37% Similarity=0.607 Sum_probs=58.3
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+|++..+..... .........+.+ .|..++..|.|.|.|.+.|..|...+.
T Consensus 120 v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~--~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 193 (304)
T 2yd9_A 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSAS--NGRIKQLRSGAL----QIESSEETDQGKYECVATNSAGVRYSS 193 (304)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEETTEECCGGGG--TTSEEECTTSCE----EECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred EeCCCeEEEEEECccCCCCeEEEEECCEECcCCCC--cceEEeCCCeEE----EEccCCcccCEEEEEEEEeCCCCEEec
Confidence 56799999999999999999999999988764311 112223334444 345668999999999999998876443
Q ss_pred eEEEEEE
Q psy8666 83 NATLQVA 89 (124)
Q Consensus 83 ~~~l~v~ 89 (124)
...+.|.
T Consensus 194 ~~~l~v~ 200 (304)
T 2yd9_A 194 PANLYVR 200 (304)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 3555553
No 149
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.16 E-value=9.6e-11 Score=70.54 Aligned_cols=79 Identities=22% Similarity=0.288 Sum_probs=54.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+...+. .+..++..|.|.|.|.+.|..|.. ..
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~-------~~~~~~~~~~~~~-~i~~v~~~d~G~Y~C~a~N~~g~~-~~ 185 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQNVSVPANT-------SHIRTPEGLYQVT-SVLRLKPQPSRNFSCMFWNAHMKE-LT 185 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE-------EEEECTTSCEEEE-EEEEECCCTTCCEEEEEEETTTTE-EE
T ss_pred cCCCCeEEEEEEccccCCceEEEEeCCCCccC-------ceeeCCCCCEEEE-EEEEEEcCCCCEEEEEEEcCCccc-cc
Confidence 35789999999999999999999998764431 1122233332222 233447889999999999999887 45
Q ss_pred eEEEEEEe
Q psy8666 83 NATLQVAV 90 (124)
Q Consensus 83 ~~~l~v~~ 90 (124)
.+.|.|..
T Consensus 186 ~~~l~v~~ 193 (202)
T 3bp6_B 186 SAIIDPLS 193 (202)
T ss_dssp EEEECC--
T ss_pred EEEEEecC
Confidence 66665543
No 150
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.16 E-value=1.6e-10 Score=68.75 Aligned_cols=70 Identities=26% Similarity=0.426 Sum_probs=52.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..|+.+.|.|.+.+.|.|.+.|++++..+.... .........+.+ .|..++..|.|.|.|.+.|..+..
T Consensus 112 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~~~~ 181 (191)
T 1epf_A 112 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK---DVRFIVLSNNYL----QIRGIKKTDEGTYRCEGRILARGE 181 (191)
T ss_dssp CCTTSCEEECCEEECSSCCEEEEEETTEEGGGGC---CTTEEECTTSCE----EETTCCGGGCEEEEEEEEEGGGTE
T ss_pred ecCCCeEEEEEEECCCCCCEEEEEECCEEeeccC---CceEEEecCCeE----EECCCChhhCEEEEEEEEEeccee
Confidence 4679999999999999999999999998875321 122233344444 456679999999999999987543
No 151
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.16 E-value=3.3e-10 Score=66.89 Aligned_cols=72 Identities=25% Similarity=0.481 Sum_probs=53.7
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+. +.|+|++..+.. ....+ .|..++..|.|.|.|.+.|..+
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~------------~~~~L----~i~~~~~~d~G~Y~C~~~n~~~--- 78 (175)
T 1fnl_A 18 SVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS------------QASSY----FIDAATVNDSGEYRCQTNLSTL--- 78 (175)
T ss_dssp EEETTCCEEEEEECCCBTTBCCCEEEETTEEEES------------SCSEE----EESSCCGGGCEEEEEECSSSCC---
T ss_pred eeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC------------CceEE----EEeCCCcccCEEEEEEeeCCcc---
Confidence 577899999999999888776 789999987652 12222 3566699999999999998544
Q ss_pred eeeEEEEEEeee
Q psy8666 81 SRNATLQVAVVI 92 (124)
Q Consensus 81 ~~~~~l~v~~~~ 92 (124)
+..+.|.|..++
T Consensus 79 s~~~~l~V~~~~ 90 (175)
T 1fnl_A 79 SDPVQLEVHIGW 90 (175)
T ss_dssp CCCEEEEEECSS
T ss_pred cccEEEEEeCCC
Confidence 345677776443
No 152
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.16 E-value=1.4e-10 Score=70.89 Aligned_cols=103 Identities=15% Similarity=0.109 Sum_probs=67.0
Q ss_pred EEecCCCEEEEEeeeccCCC--eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP--TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p--~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+++.|.|.+ +.|.| .++|++....+. ..... ... ....|.+++.+|.|.|.|.+.|..+..
T Consensus 18 ~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~--------~~~~~-~~~--~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 85 (210)
T 1gsm_A 18 AVALGASRQLTCRL-ACADRGASVQWRGLDTSLG--------AVQSD-TGR--SVLTVRNASLSAAGTRVCVGSCGGRTF 85 (210)
T ss_dssp EEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTC--------CEEEE-SSE--EEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEeCCCCEEEEEEC-CCCCCCcceEEeecccccC--------cEEec-CCc--cEEEECccCcccCceEEEEEEeCCCce
Confidence 57789999999999 88877 999998542221 11111 111 122457779999999999999988775
Q ss_pred eeeeEEEEEEeeeeeeeeccceehhhhhheeeeeecCcc
Q psy8666 80 VSRNATLQVAVVIFFISFFRFKLSAYLYDLFRGVVNKTN 118 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (124)
...+.|.|..+|.............-.. +.|.+.|..
T Consensus 86 -~~~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~ 122 (210)
T 1gsm_A 86 -QHTVQLLVYAFPNQLTVSPAALVPGDPE-VACTAHKVT 122 (210)
T ss_dssp -EEEEEEEEEBCCSEEEEESSSBCTTCCE-EEEEEEEEB
T ss_pred -EEEEEEEEEecCCCcEEccceEEeCCce-EEEEeCCCC
Confidence 6788999988876543221111111112 777776654
No 153
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.15 E-value=1.5e-10 Score=70.24 Aligned_cols=82 Identities=41% Similarity=0.623 Sum_probs=58.2
Q ss_pred EecCCCEEEEEee-eccCCCeEEEEeCCEEeeccCCC---CCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 3 VAKNEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSD---AKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 3 ~~~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
+..|+.+.|.|.+ .+.|.|.+.|++++..+...... ..........+.+ .|..++.+|.|.|.|.+.|..|.
T Consensus 120 ~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~N~~G~ 195 (217)
T 2vr9_A 120 VAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNL----LISNVEPIDEGNYKCIAQNLVGT 195 (217)
T ss_dssp ECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEE----EESSCCSTTCEEEEEEEEETTEE
T ss_pred EcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcE----EEeeCCHHHCeEEEEEEEcccce
Confidence 5679999999998 89999999999999887632110 1112222233333 45667999999999999999998
Q ss_pred ceeeeEEEEE
Q psy8666 79 AVSRNATLQV 88 (124)
Q Consensus 79 ~~~~~~~l~v 88 (124)
..+....|.+
T Consensus 196 ~~~~~~~lv~ 205 (217)
T 2vr9_A 196 RESSYAKLIV 205 (217)
T ss_dssp EECCCEEEEE
T ss_pred eccccEEEEE
Confidence 7554445544
No 154
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.15 E-value=7e-10 Score=66.73 Aligned_cols=86 Identities=16% Similarity=0.146 Sum_probs=56.1
Q ss_pred EEecCCCEEEEEeeeccCC-----CeEEEEeCCEEeeccCCCCCceEEEccC--CcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-----PTIEWYKDGELVETSKSDAKSQRVILPT--GSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-----p~v~w~k~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|.+.+.|. +.+.|+|++...... ..+...... ........|.+++.+|.|.|.|.+.+
T Consensus 13 ~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~----~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQ----SERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp EEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCB----CSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccccc----CCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 4678999999999988876 789999943332211 011111111 00112334677899999999999999
Q ss_pred CCccceeeeEEEEEEeee
Q psy8666 75 SVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~~ 92 (124)
..+.. +..+.|.|..++
T Consensus 89 ~~~~~-~~~~~l~V~~~~ 105 (202)
T 3bp6_B 89 GAAWD-YKYLTVKVKASY 105 (202)
T ss_dssp TTEEE-EEEEEEEEEBCC
T ss_pred CCCcc-eEEEEEEecCCC
Confidence 88766 567778777653
No 155
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.15 E-value=2.7e-10 Score=72.47 Aligned_cols=78 Identities=21% Similarity=0.364 Sum_probs=57.0
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.| .+.|+|++..+.... ..... .+ .....|..++.+|.|.|.|.+.|..|..
T Consensus 232 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~-----~~~~~-~~--~~~L~I~~v~~~d~G~Y~C~a~N~~G~~- 302 (312)
T 2y23_A 232 EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-----KHDFK-DG--ICTLLITEFSKKDAGIYEVILKDDRGKD- 302 (312)
T ss_dssp EEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEEC-----CC-----C--EEEEEECSCSGGGCEEEEEEEESTTCCE-
T ss_pred EEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCC-----cEEEE-CC--EEEEEECcCCHHHCEEEEEEEEcCCCce-
Confidence 45689999999999999988 999999999877321 11111 11 1234567789999999999999999987
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
...+.|.+
T Consensus 303 ~~~~~l~i 310 (312)
T 2y23_A 303 KSRLKLVD 310 (312)
T ss_dssp EEEEEECS
T ss_pred eeeeEEEe
Confidence 44555543
No 156
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.15 E-value=2.5e-10 Score=66.85 Aligned_cols=73 Identities=18% Similarity=0.326 Sum_probs=54.2
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+. +.|.+.+.|+|+|..+... .....+ .|..++.+|.|.|.|.+.|..|...
T Consensus 96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----------~~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~~ 161 (170)
T 3ry4_A 96 EFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS----------HLDPTF----SIPQANHSHSGDYHCTGNIGYTLFS 161 (170)
T ss_dssp EECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE----------SSCCEE----EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eeecCCeEEEEEECCCCCCCceEEEEECCeEcccc----------CCCCeE----EEEeccccCCEEEEEEEEeCcCccc
Confidence 356799999999995 5566899999999876521 112222 3566689999999999999988755
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
+..+.|.|
T Consensus 162 s~~~~l~V 169 (170)
T 3ry4_A 162 SKPVTITV 169 (170)
T ss_dssp CCCEEEEE
T ss_pred cccEEEEE
Confidence 66666655
No 157
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.15 E-value=2.1e-10 Score=75.16 Aligned_cols=86 Identities=31% Similarity=0.591 Sum_probs=61.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccC------CeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQD------GGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d------~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+| +|..+.... ........+.+. |..++..| .|.|.|.+.|
T Consensus 15 ~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~----~~~~~~~~~~L~----i~~~~~~d~~~~~d~G~Y~C~a~n 86 (388)
T 2v5m_A 15 DFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVP----GLRQISSDGKLV----FPPFRAEDYRQEVHAQVYACLARN 86 (388)
T ss_dssp EEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBT----TTBEECSTTEEE----ECCCCGGGCCHHHHEEEEEEEEEE
T ss_pred EEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCC----CceEEcCCceEE----ecccChhhccccccCceEEEEEEc
Confidence 35689999999999999999999999 777655321 112233445443 45557776 9999999999
Q ss_pred CCccceeeeEEEEEEeeeeee
Q psy8666 75 SVGTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~~~~~ 95 (124)
..|...+..+.+.+..+|.+.
T Consensus 87 ~~g~~~s~~~~v~v~~~p~~~ 107 (388)
T 2v5m_A 87 QFGSIISRDVHVRAVVAQYYE 107 (388)
T ss_dssp TTEEEECCCEEEEEECCCCCC
T ss_pred cCCeEEecceEEEEccccccc
Confidence 988765567777776665543
No 158
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.15 E-value=1.5e-10 Score=75.84 Aligned_cols=82 Identities=20% Similarity=0.302 Sum_probs=59.3
Q ss_pred CEEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 1 MVVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+.+..|+.+.+.|.+.+ |.|.+.|++++....... ....+... ..+.+ .|..++.+|.|.|.|.+.|..|..
T Consensus 256 v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~-~~~~r~~~-~~~~L----~I~~v~~~D~G~Y~C~a~N~~g~~- 327 (361)
T 2xot_A 256 WEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQ-GSNGSVSV-RNGDL----FFKKVQVEDGGVYTCYAMGETFNE- 327 (361)
T ss_dssp CEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSC-CSSSSEEE-ETTEE----EESSCCTTSCEEEEEEEECSSCEE-
T ss_pred ceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeec-ccCCceEe-ecCeE----EEeecCcccCEEEEEEEecCCCcc-
Confidence 36789999999999998 999999999776543221 01112222 44444 456779999999999999998877
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.+.|..
T Consensus 328 ~~~~~l~V~~ 337 (361)
T 2xot_A 328 TLSVELKVYN 337 (361)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEEEEEe
Confidence 5677777754
No 159
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.14 E-value=2.8e-10 Score=73.40 Aligned_cols=80 Identities=21% Similarity=0.289 Sum_probs=56.2
Q ss_pred ecCCCEEEEEeeeccC-CCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeC--Cccc-
Q psy8666 4 AKNEPVTLNCKAEGKP-EPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNS--VGTA- 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p-~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~--~~~~- 79 (124)
..|+.+.|.|.+.+.| .|.+.|+|++..+.... ..... ....+ .|..++.+|.|.|.|.+.|. .+..
T Consensus 141 ~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~----~~~~~-~~~~L----~I~~v~~~D~G~Y~C~a~n~~~~g~~~ 211 (329)
T 3oq3_B 141 HDKYGIDLYCGILYAKHYNNITWYKNNQELIIDG----TKYSQ-SGQNL----IIHNPELEDSGRYDCYVHYDDVRIKND 211 (329)
T ss_dssp STTTCEEEECCCCSCCCCCEEEEEETTEECCCSS----SSEEE-ETTEE----EECSCCGGGCEEEEEEEEECCTTSSSC
T ss_pred eCCCcEEEEeccCCCCCCceEEEEECCccCCCCC----ceEec-CCCEE----EEeecChhhCEEEEEEEEecccCCCce
Confidence 4689999999999999 89999999998875221 12212 23444 35666999999999999997 5433
Q ss_pred --eeeeEEEEEEeee
Q psy8666 80 --VSRNATLQVAVVI 92 (124)
Q Consensus 80 --~~~~~~l~v~~~~ 92 (124)
.+..+.|.|..++
T Consensus 212 ~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 212 IVVSRCKILTVIPSQ 226 (329)
T ss_dssp EEEEEEEEEEEECCC
T ss_pred eEEEeeEEEEEECCC
Confidence 1223667776554
No 160
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.14 E-value=2.5e-10 Score=72.24 Aligned_cols=86 Identities=20% Similarity=0.230 Sum_probs=57.0
Q ss_pred EecCCCEEEEEeeeccCCCe-EEEEeCCEEe----eccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPT-IEWYKDGELV----ETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
+..|+.+.|.|.+.+.|.|. +.|++++..+ .... .................|..++..|.|.|.|.+.|..|
T Consensus 200 v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g 276 (290)
T 2o26_X 200 LKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKH---NSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFG 276 (290)
T ss_dssp CCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEEC---CEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSC
T ss_pred EecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecc---cccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCC
Confidence 46799999999999999997 9999998763 2110 01111000111223345678899999999999999999
Q ss_pred cceeeeEEEEEEeee
Q psy8666 78 TAVSRNATLQVAVVI 92 (124)
Q Consensus 78 ~~~~~~~~l~v~~~~ 92 (124)
.. +..+.|.|..+|
T Consensus 277 ~~-~~~~~l~V~~~P 290 (290)
T 2o26_X 277 SA-NVTTTLKVVEKG 290 (290)
T ss_dssp EE-EEEEEECC----
T ss_pred cE-EEEEEEEEEeCC
Confidence 87 567777766543
No 161
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.14 E-value=2e-10 Score=70.08 Aligned_cols=75 Identities=25% Similarity=0.457 Sum_probs=58.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+... ....+ .|..++..|.|.|.|.+.+..+...+
T Consensus 29 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-----------~~~~L----~i~~v~~~d~G~Y~C~~~n~~~~~~s 93 (218)
T 3k0w_A 29 AVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-----------NTSEL----IFNAVHVKDAGFYVCRVNNNFTFEFS 93 (218)
T ss_dssp EEETTSBEEEECEETTTTSSEEEEEETTEECTTC-----------CSSEE----EETTCCGGGCEEEEEEEECTTCCEEC
T ss_pred EEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-----------CCCEE----EEccCChhhCeEeEEEEEcCCCCcee
Confidence 4678999999999999999999999999876531 11222 35677999999999999998876555
Q ss_pred eeEEEEEEee
Q psy8666 82 RNATLQVAVV 91 (124)
Q Consensus 82 ~~~~l~v~~~ 91 (124)
..+.|.|...
T Consensus 94 ~~~~l~V~~~ 103 (218)
T 3k0w_A 94 QWSQLDVCDI 103 (218)
T ss_dssp CCEEEEEECC
T ss_pred eEEEEEEEcc
Confidence 6677777654
No 162
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.14 E-value=7.5e-10 Score=69.78 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=58.0
Q ss_pred ecCCCEEEEEeeec-cCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 4 AKNEPVTLNCKAEG-KPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 4 ~~G~~~~l~C~~~~-~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
..|+.+.|.|.+.+ .|.|.+.|++++..+... ...... ..........|..++..|.|.|.|.+.|..|.. .
T Consensus 199 ~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~ 272 (289)
T 3ejj_X 199 IRGEAAQIVCSATNAEVGFNVILKRGDTKLEIP-----LNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR-T 272 (289)
T ss_dssp CSSSCEEEEEEEEESSSCCEEEEEETTEECCCC-----EEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEE-E
T ss_pred EeCCcEEEEEEeCCCCCceEEEEEECCEEeecc-----CCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCc-c
Confidence 57999999999988 689999999999876532 111111 111112334567789999999999999999988 5
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.+...+
T Consensus 273 ~s~~L~~~~~~ 283 (289)
T 3ejj_X 273 ATMNFQVVESH 283 (289)
T ss_dssp EEEEEECC---
T ss_pred ccEEEEEEecc
Confidence 67777765543
No 163
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.14 E-value=2.3e-10 Score=68.47 Aligned_cols=74 Identities=38% Similarity=0.638 Sum_probs=53.8
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.| .+.|++++..+...... .....+ .|..++ |.|.|.|.+.|..|...
T Consensus 117 ~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-------~~~~~L----~i~~~~--d~G~Y~C~a~N~~g~~~ 183 (195)
T 2c5d_C 117 TVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-------GPQRSL----HVPGLN--KTSSFSCEAHNAKGVTT 183 (195)
T ss_dssp EECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-------SCCEEE----EECCCS--SCEEEEEEEEETTEEEE
T ss_pred EEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-------CCCCeE----EEcccc--cCceEEEEEEcCCCceE
Confidence 35679999999999999999 99999999876532110 111222 233334 78999999999998875
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
+..+.|.|
T Consensus 184 s~~~~l~V 191 (195)
T 2c5d_C 184 SRTATITV 191 (195)
T ss_dssp CCCEEEEE
T ss_pred EEEEEEEE
Confidence 56777777
No 164
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.14 E-value=2e-10 Score=75.48 Aligned_cols=80 Identities=25% Similarity=0.503 Sum_probs=59.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+++|..+...... .. .....+.+ .|..++.+|.|.|.|.+.|..|.. .
T Consensus 323 ~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~--~~-~~~~~~~L----~i~~v~~~d~G~Y~C~a~N~~G~~-~ 394 (404)
T 3p3y_A 323 ILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN--PN-REVAGDTI----IFRDTQISSRAVYQCNTSNEHGYL-L 394 (404)
T ss_dssp EECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCC--TT-EEEETTEE----EESSCCSSCCCEEEEEEEETTEEE-E
T ss_pred eeecCCcEEEEEEccccCCCceEEEECCEecCCCCCC--ce-EEecCCEE----EEeecCHHHCEEEEEEEEeCCCcE-E
Confidence 3567999999999999999999999999987643211 11 11223333 456779999999999999999987 4
Q ss_pred eeEEEEEE
Q psy8666 82 RNATLQVA 89 (124)
Q Consensus 82 ~~~~l~v~ 89 (124)
..+.|.|.
T Consensus 395 ~~~~l~V~ 402 (404)
T 3p3y_A 395 ANAFVSVL 402 (404)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 56666654
No 165
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.13 E-value=1.1e-09 Score=64.18 Aligned_cols=74 Identities=26% Similarity=0.504 Sum_probs=53.3
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|++..+... ...+.+. .++..|.|.|.|.+.+...
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~------------~~~~~~~----~~~~~d~G~Y~C~~~~~~~--- 75 (170)
T 3ry4_A 15 NVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH------------TQPSYRF----KANNNDSGEYTCQTGQTSL--- 75 (170)
T ss_dssp EEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC------------CSSEEEE----ECCGGGCEEEEEEETTSBC---
T ss_pred EEECCCcEEEEEEecCCCCcceEEEEECCeEcccC------------ccceEEE----ecccccCeEEEEEEeCCCc---
Confidence 467899999999998876 6789999999876531 1223333 3489999999999987543
Q ss_pred eeeEEEEEEeeeee
Q psy8666 81 SRNATLQVAVVIFF 94 (124)
Q Consensus 81 ~~~~~l~v~~~~~~ 94 (124)
+..+.|.|..++..
T Consensus 76 s~~~~l~v~~~~~~ 89 (170)
T 3ry4_A 76 SDPVHLTVLFEWLV 89 (170)
T ss_dssp CCCEEEEEECCSEE
T ss_pred eEeEEEEEECCceE
Confidence 33567777665433
No 166
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.13 E-value=1.4e-09 Score=64.41 Aligned_cols=83 Identities=24% Similarity=0.370 Sum_probs=56.3
Q ss_pred EecCCCEEEEEeeeccC-CCeEEEEe---CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCC-ccCCeEEEEEeEeCCc
Q psy8666 3 VAKNEPVTLNCKAEGKP-EPTIEWYK---DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKK-EQDGGVYWCLARNSVG 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p-~p~v~w~k---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~d~g~y~C~~~~~~~ 77 (124)
+..|+.+.|.|.+.+.| .|.+.|++ ++....... ...+......+.. ....|..++ ..|.|.|.|.+.|..|
T Consensus 95 ~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~L~i~~v~~~~d~G~Y~C~a~N~~g 171 (184)
T 3b5h_A 95 INEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNG--SESRFFVSSSQGR-SELHIENLNMEADPGQYRCNGTSSKG 171 (184)
T ss_dssp ECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTT--GGGTEEEEEETTE-EEEEECSCCTTTSSEEEEEEEEETTE
T ss_pred EcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecC--CCCEEEEEecCCe-eEEEEeeccccccCceEEEEEEeCCC
Confidence 56799999999999999 79999999 444332110 0122222222222 223457778 8999999999999999
Q ss_pred cceeeeEEEEEE
Q psy8666 78 TAVSRNATLQVA 89 (124)
Q Consensus 78 ~~~~~~~~l~v~ 89 (124)
.. ...+.|.|.
T Consensus 172 ~~-~~~~~l~V~ 182 (184)
T 3b5h_A 172 SD-QAIITLRVR 182 (184)
T ss_dssp EE-EEEEEEEEC
T ss_pred cc-eEEEEEEEe
Confidence 87 445666664
No 167
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.13 E-value=6.9e-11 Score=79.04 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=54.5
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+.+|+.+.|.|.+.+.|.|.+.|+|+|..+...... .. ....+. .......|.|.|.|.+.|..|.. +.
T Consensus 338 v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~-------~~-~~~~~~--~~~~~~~D~G~YtC~A~N~~G~~-~~ 406 (423)
T 3qs7_E 338 IDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG-------LD-NGYSIS--KFCNHKHQPGEYIFHAENDDAQF-TK 406 (423)
T ss_dssp CCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB-------CS-SSSEEE--EECCCTTCCSCEEEEEEETTEEE-EE
T ss_pred ecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc-------cc-CCcEEE--EEecccccCEEEEEEEEcCCceE-EE
Confidence 457899999999999999999999999988642100 00 111110 02236789999999999999988 67
Q ss_pred eEEEEEEeeee
Q psy8666 83 NATLQVAVVIF 93 (124)
Q Consensus 83 ~~~l~v~~~~~ 93 (124)
.+.|.|...|.
T Consensus 407 s~~L~v~~~p~ 417 (423)
T 3qs7_E 407 MFTLNIRSGTK 417 (423)
T ss_dssp EEEEC------
T ss_pred EEEEEEecCCc
Confidence 88888877664
No 168
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.13 E-value=1.9e-09 Score=76.88 Aligned_cols=91 Identities=26% Similarity=0.511 Sum_probs=66.4
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+++|..+..... ..........+.......|..++..|.|.|.|.+.|..|.. ..
T Consensus 441 v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~ 518 (816)
T 3dmk_A 441 MEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDR-YQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA-EH 518 (816)
T ss_dssp ECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTT-EEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEE-EE
T ss_pred EcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCC-cccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeE-EE
Confidence 56799999999999999999999999988753210 00111122344444445667889999999999999999887 56
Q ss_pred eEEEEEEeeeeee
Q psy8666 83 NATLQVAVVIFFI 95 (124)
Q Consensus 83 ~~~l~v~~~~~~~ 95 (124)
...|.|..+|.+.
T Consensus 519 ~~~l~V~~~p~~~ 531 (816)
T 3dmk_A 519 SAKLNVYGLPYIR 531 (816)
T ss_dssp EEEEEECSSCEEC
T ss_pred EEEEEEecCCeeE
Confidence 7888887776543
No 169
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.13 E-value=4.3e-10 Score=69.20 Aligned_cols=83 Identities=28% Similarity=0.480 Sum_probs=59.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+....... ..........+ .|..++..|.|.|.|.+.+..+.. .
T Consensus 26 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L----~i~~v~~~d~G~Y~C~~~~~~~~~-~ 99 (241)
T 3grw_A 26 AVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG-GIKLRHQQWSL----VMESVVPSDRGNYTCVVENKFGSI-R 99 (241)
T ss_dssp EEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTT-CCEEEGGGTEE----EECSCCGGGCEEEEEEEEETTEEE-E
T ss_pred EEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCccc-ceeeeccceEE----EEEeCCcccCEEEEEEEeecCCce-E
Confidence 46789999999999999999999999998876432111 11122233333 356669999999999999988776 4
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 100 ~~~~l~V~~ 108 (241)
T 3grw_A 100 QTYTLDVLE 108 (241)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 566777754
No 170
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.12 E-value=6e-10 Score=62.03 Aligned_cols=89 Identities=19% Similarity=0.319 Sum_probs=55.2
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCCEEeeccCCC--------CCceEEEccCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDGELVETSKSD--------AKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+..|+.+.|.|...+. +.+.+.|+|+...+...... ...+.....+..+ .|.+++.+|.|.|.|.
T Consensus 14 ~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL----~I~~v~~~D~G~Y~C~ 89 (117)
T 3q0h_A 14 SAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGL----TLQSLTVNDTGEYFCI 89 (117)
T ss_dssp EEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCE----EECSCCGGGCEEEEEE
T ss_pred EEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEE----EEeeCChhhCEEEEEE
Confidence 46789999999998762 33468999986543211000 0112222223333 4577799999999998
Q ss_pred eEe-CCccceeeeEEEEEEeeeeee
Q psy8666 72 ARN-SVGTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 72 ~~~-~~~~~~~~~~~l~v~~~~~~~ 95 (124)
+.+ ..|.. ...+.|.|..+|.+.
T Consensus 90 v~~~~~g~~-~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 90 YHTYPDGTY-TGRIFLEVLESSVAE 113 (117)
T ss_dssp EEEETTCCE-EEEEEEEEECC----
T ss_pred EEECCCCCe-EEEEEEEEEccCccc
Confidence 765 44555 567889998887654
No 171
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.12 E-value=1.1e-09 Score=65.86 Aligned_cols=83 Identities=23% Similarity=0.117 Sum_probs=49.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc--
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA-- 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~-- 79 (124)
.+..|+.+.|.|.+.+. .+.+.|+|+|..+.... ........+.......|..++.+|.|.|.|.+.|..+..
T Consensus 111 ~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~ 185 (198)
T 1ugn_A 111 VVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQC----LNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEW 185 (198)
T ss_dssp EEETTCCEEEEEECSSC-CSEEEEEEC------CE----EEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEE
T ss_pred ccCCCCcEEEEEecCCC-CcEEEEEECCCccCCcc----ccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccc
Confidence 46789999999999887 78999999998754210 000011111111223467779999999999999976522
Q ss_pred --eeeeEEEEEE
Q psy8666 80 --VSRNATLQVA 89 (124)
Q Consensus 80 --~~~~~~l~v~ 89 (124)
.+..+.|.|.
T Consensus 186 s~~S~~~~l~V~ 197 (198)
T 1ugn_A 186 SLPSDLLELLVL 197 (198)
T ss_dssp CCCCCCEEEEEE
T ss_pred cCcCceEEEEec
Confidence 2556666653
No 172
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.12 E-value=4e-10 Score=68.58 Aligned_cols=83 Identities=13% Similarity=0.234 Sum_probs=53.8
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeC-CEEeeccCCCCCceEEE--ccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKD-GELVETSKSDAKSQRVI--LPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~-g~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..|+.+.|.|.+.|.|.|.+.|+++ +..+... ..... ...+..... ....++..|.|.|.|.+.|..|..
T Consensus 128 ~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~-----~~~~~~~~~~~~~~~~-~~l~v~~~d~g~Y~C~a~n~~g~~ 201 (222)
T 3sbw_C 128 DPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGK-----TTTTNSKREEKLFNVT-STLRINTTTNEIFYCTFRRLDPEE 201 (222)
T ss_dssp ETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCE-----EEEEECC----CEEEE-EEEEEECCTTCEEEEEEEETTTTE
T ss_pred ecCCCcEEEEEEecCCCCCeEEEEECCCceecCc-----cceEEEcCCCCCEEEE-EEEEEeccCCcEEEEEEEeCccce
Confidence 45788999999999999999999998 5544321 11111 112222211 111226789999999999999887
Q ss_pred eeeeEEEEEEeee
Q psy8666 80 VSRNATLQVAVVI 92 (124)
Q Consensus 80 ~~~~~~l~v~~~~ 92 (124)
...+.|.|...|
T Consensus 202 -~~~~~l~v~~~p 213 (222)
T 3sbw_C 202 -NHTAELVIPELP 213 (222)
T ss_dssp -EEEEEEECCCC-
T ss_pred -eeEEEEEecCCc
Confidence 567777776544
No 173
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.11 E-value=5.8e-10 Score=73.08 Aligned_cols=86 Identities=22% Similarity=0.414 Sum_probs=60.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+|++..+.... .........+... ...|..+...|.|.|.|.+.|..|.. ..
T Consensus 112 ~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~---~~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~a~N~~G~~-~~ 186 (389)
T 2jll_A 112 SWEGNPINISCDVKSNPPASIHWRRDKLVLPAKN---TTNLKTYSTGRKM-ILEIAPTSDNDFGRYNCTATNHIGTR-FQ 186 (389)
T ss_dssp ECTTCCEEEEECEEEESCCEEEEEETTEESSCTT---CTTEEEEECSSCE-EEEECCCSTTSSEEEEEEEEETTEEE-EE
T ss_pred eccCCEEEEEEEEEecCCCeEEEEECCccCCccc---CceEEEeccCCEE-EEEECCCChhhCEEEEEEEEcCCCcE-EE
Confidence 5679999999999999999999999998876421 0112222222211 23456778999999999999999987 44
Q ss_pred eEEEEEEeeee
Q psy8666 83 NATLQVAVVIF 93 (124)
Q Consensus 83 ~~~l~v~~~~~ 93 (124)
.+.+.+...|.
T Consensus 187 ~~~l~v~~~P~ 197 (389)
T 2jll_A 187 EYILALADVPS 197 (389)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEecCCCC
Confidence 56666654443
No 174
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.11 E-value=4.4e-10 Score=68.41 Aligned_cols=86 Identities=20% Similarity=0.352 Sum_probs=55.0
Q ss_pred EecCCCEEEEEee-eccCCCeEEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 3 VAKNEPVTLNCKA-EGKPEPTIEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 3 ~~~G~~~~l~C~~-~~~p~p~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+..|+.+.|.|.+ .+.|.|.+.|++ ++..+... ..........+.. ....+..++.+|.|.|.|.+.|..|..
T Consensus 122 v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~~-~~l~i~~v~~~d~G~Y~C~a~n~~g~~- 196 (222)
T 4i0k_A 122 LRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGN---VTTSQMANERGLF-DVHSVLRVVLGANGTYSCLVRNPVLQQ- 196 (222)
T ss_dssp --CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSE---EEEEEEECTTSCE-EEEEEEEEECCTTCEEEEEEEETTTTE-
T ss_pred ecCCceEEEEEecccccCCCeEEEEcCCCccCCCC---cceeEEcCCCCeE-EEEEEEEEEeCCCCEEEEEEECCCCCC-
Confidence 4568999999999 788999999998 45443311 0011111222322 222234448899999999999999987
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
...+.|.|..+|.
T Consensus 197 ~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 197 DAHGSVTITGQPL 209 (222)
T ss_dssp EEEEEEECCC---
T ss_pred ceEEEEEEeCCcc
Confidence 5678888877664
No 175
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.11 E-value=2.5e-10 Score=70.55 Aligned_cols=73 Identities=18% Similarity=0.421 Sum_probs=49.4
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCC-------------------CCceEEEccCCcEEEEEEEcCCCcc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSD-------------------AKSQRVILPTGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~~~~~ 63 (124)
+.+|+.+.|.|.+.+.|.|.+.|+|++..+...... ............ ..|..++.+
T Consensus 148 v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----L~i~~v~~~ 223 (250)
T 2fbo_J 148 VDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARN----LVIRAAKIT 223 (250)
T ss_dssp CCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTE----EEECSCCGG
T ss_pred ecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccE----EEEecCCcc
Confidence 346999999999999999999999998765421000 000000111122 345677999
Q ss_pred CCeEEEEEeEeCCccc
Q psy8666 64 DGGVYWCLARNSVGTA 79 (124)
Q Consensus 64 d~g~y~C~~~~~~~~~ 79 (124)
|.|.|.|.+.|..|..
T Consensus 224 D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 224 DAGRVWCELATGQGEL 239 (250)
T ss_dssp GCEEEEEEEESSSSGG
T ss_pred cCEEEEEEecCCcccc
Confidence 9999999999976654
No 176
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.11 E-value=4.8e-10 Score=67.55 Aligned_cols=85 Identities=28% Similarity=0.531 Sum_probs=57.9
Q ss_pred EEecCCCEEEEEe-eeccCCCeEEEEeCCE-EeeccCCC----CCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCK-AEGKPEPTIEWYKDGE-LVETSKSD----AKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~-~~~~p~p~v~w~k~g~-~~~~~~~~----~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+.+.|.|. ..+.|.|.+.|++++. .+...... ....... .....+ .|..++.+|.|.|.|.+.|
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n 190 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDL----IFDPVTAFDSGEYYCQAQN 190 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCE----EESSCCGGGCEEEEEEEEC
T ss_pred ccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceE----EEEecChhhCcEEEEEEcc
Confidence 3568999999999 7899999999999998 66532110 0011111 123333 3566699999999999999
Q ss_pred CCccc-eeeeEEEEEEe
Q psy8666 75 SVGTA-VSRNATLQVAV 90 (124)
Q Consensus 75 ~~~~~-~~~~~~l~v~~ 90 (124)
..|.. .+..+.|.|..
T Consensus 191 ~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 191 GYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSSCCEECCCEEEEEES
T ss_pred ccCCccccceEEEEEEE
Confidence 99877 45566666643
No 177
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.10 E-value=7.4e-11 Score=71.19 Aligned_cols=77 Identities=22% Similarity=0.349 Sum_probs=54.5
Q ss_pred EecCCCEEEEEee-eccCCCeEEEEeCCE--EeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 3 VAKNEPVTLNCKA-EGKPEPTIEWYKDGE--LVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~-~~~p~p~v~w~k~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..|+.+.|.|.+ .+.|.|.+.|++++. .+... .......+.+ .|..++.+|.|.|.|.+.|..|..
T Consensus 133 ~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~------~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~N~~g~~ 202 (214)
T 3jz7_A 133 EEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTP------WLAEMTSPVI----SVKNASSEYSGTYSCTVQNRVGSD 202 (214)
T ss_dssp CBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGG------GGGGTTSSEE----EECSCCGGGCEEEEEEEECSSCEE
T ss_pred eecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcc------ceeccCCCEE----EEecCCHHHCEEEEEEEEcCCCcE
Confidence 4568999999999 789999999999543 22211 1111122323 356679999999999999999887
Q ss_pred eeeeEEEEEEe
Q psy8666 80 VSRNATLQVAV 90 (124)
Q Consensus 80 ~~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 203 -~~~~~l~V~~ 212 (214)
T 3jz7_A 203 -QCMLRLDVVP 212 (214)
T ss_dssp -EEEEEECCBC
T ss_pred -EEEEEEEEeC
Confidence 5677776653
No 178
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.10 E-value=9.8e-10 Score=66.02 Aligned_cols=72 Identities=17% Similarity=0.337 Sum_probs=49.0
Q ss_pred ecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+. +.|.|.+.|+|+|..+... .........+.++....+..++..|.|.|.|.+.|..+..
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~----~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~ 191 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAI----NTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRV 191 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCS----EEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccc----cceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCccee
Confidence 3477789999995 8899999999999877632 1122222232332222223336789999999999998876
No 179
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.10 E-value=8.6e-10 Score=65.17 Aligned_cols=72 Identities=35% Similarity=0.592 Sum_probs=52.6
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|.| .+.|++++..+... . .....+ .|.. .+|.|.|.|.+.|..|...
T Consensus 109 ~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~------~---~~~~~L----~i~~--~~d~G~Y~C~a~N~~g~~~ 173 (182)
T 1rhf_A 109 AVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP------A---PSPSVL----NVTG--VTQSTMFSCEAHNLKGLAS 173 (182)
T ss_dssp EECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS------E---ESSEEE----EECC--CSSCEEEEEEEEETTEEEE
T ss_pred EecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC------C---CCceEE----EEec--cccCeEEEEEEECCCCCcc
Confidence 35679999999999999999 99999999877532 1 011122 2233 3689999999999998875
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
+..+.|.|
T Consensus 174 s~~~~l~V 181 (182)
T 1rhf_A 174 SRTATVHL 181 (182)
T ss_dssp CCCEEEEE
T ss_pred cceEEEEe
Confidence 55666665
No 180
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.09 E-value=1.3e-09 Score=65.93 Aligned_cols=88 Identities=23% Similarity=0.361 Sum_probs=55.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee---c----cCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE---T----SKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~---~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++ ..+. . ................. ....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 90 (213)
T 3d9a_L 12 SVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTD-FTLSINSVETEDFGMYFCQQ 90 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCE-EEEEECCCChhhCEEEEEee
Confidence 4678999999999999888999999843 2110 0 00000011111111111 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+..+........|.|..
T Consensus 91 ~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 91 SNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp CSSSSCEECCCEEEEECC
T ss_pred ecCCcceeCCCEEEEEec
Confidence 998765444455666654
No 181
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.08 E-value=3.5e-10 Score=74.02 Aligned_cols=83 Identities=34% Similarity=0.592 Sum_probs=59.9
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCc-cCCeEEEEEeEeCCccceee
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKE-QDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~d~g~y~C~~~~~~~~~~~~ 82 (124)
.+|+.+.|.|.+.+.|.|.+.|+|+|..+.... .... ....+.+. |..+.. .|.|.|.|.+.|..|...+.
T Consensus 20 ~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~---~~~~-~~~~~~L~----i~~~~~~~D~G~Y~C~a~n~~g~~~s~ 91 (382)
T 1cs6_A 20 SAEEKVTLTCRARANPPATYRWKMNGTELKMGP---DSRY-RLVAGDLV----ISNPVKAKDAGSYQCVATNARGTVVSR 91 (382)
T ss_dssp CSCCEEEECCEEEEESCCEEEEEETTEECCCST---TSSE-EEETTEEE----EESCCHHHHCEEEEEEEEETTEEEECC
T ss_pred CCCCcEEEEEEecCCCCCEEEEEECCEECCcCC---CccE-EeeCCeEE----EecccccccCEEEEEEEEcCCcEEEec
Confidence 578999999999999999999999998876321 1122 22344443 334465 99999999999998876555
Q ss_pred eEEEEEEeeeee
Q psy8666 83 NATLQVAVVIFF 94 (124)
Q Consensus 83 ~~~l~v~~~~~~ 94 (124)
...|.|...+.+
T Consensus 92 ~~~l~v~~~~~~ 103 (382)
T 1cs6_A 92 EASLRFGFLQEF 103 (382)
T ss_dssp CEEEEEEEECCC
T ss_pred ceEEEeeccccc
Confidence 677777665543
No 182
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.08 E-value=6.5e-10 Score=66.77 Aligned_cols=70 Identities=17% Similarity=0.164 Sum_probs=41.3
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
+..|+.+.|.|.+.+.| +.+.|+|+|..+.... ........+.......|..++.+|.|.|.|.+.|..+
T Consensus 111 v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 111 VTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWT----LDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ------CEEEEEESSCC-SEEEEEEC---CCEEE----EECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ccCCCcEEEEEEcCCCC-CEEEEEccCCcccccc----cccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 56799999999999888 8999999998654210 0001112222223345677799999999999999653
No 183
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.08 E-value=4e-10 Score=75.58 Aligned_cols=85 Identities=28% Similarity=0.443 Sum_probs=58.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+++.+.|.+ +.|.|.+.|++++....... ...........+.+ .|..++.+|.|.|.|.+.|..|.. +
T Consensus 352 ~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~L----~I~~v~~~D~G~Y~C~a~N~~G~~-~ 424 (440)
T 3zyj_A 352 NVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHG-AYKVRIAVLSDGTL----NFTNVTVQDTGMYTCMVSNSVGNT-T 424 (440)
T ss_dssp EECTTSCCEECCEE-SSTTSEEEEECTTSCEEESS-SCCSSEEECTTCCE----EESSCCSTTCEEEEEEEECSSCEE-E
T ss_pred eeccCceEEEEeec-CCCCCceEEEeCCCceeecc-CCCceEEEccCCeE----EEccCChhhCEEEEEEEEcCCCcE-E
Confidence 46789999999999 56899999999554333211 11123334445554 456779999999999999999988 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.+.|...|.
T Consensus 425 ~~~~~~v~~~~~ 436 (440)
T 3zyj_A 425 ASATLNVTGTHH 436 (440)
T ss_dssp EEEEEEEC----
T ss_pred EEEEEEEecccc
Confidence 677888776654
No 184
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.08 E-value=2.3e-09 Score=66.42 Aligned_cols=114 Identities=14% Similarity=0.056 Sum_probs=63.7
Q ss_pred EEecCCCEEEEEeeeccCCCe-----EEEEeCCEEee----ccCCCCCceEEEccCCc--------EEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-----IEWYKDGELVE----TSKSDAKSQRVILPTGS--------LFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-----v~w~k~g~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.|.+. +.|+|++.... ................. ......|.+++..|
T Consensus 14 ~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 93 (248)
T 3pv7_A 14 ITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEE 93 (248)
T ss_dssp EEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHH
Confidence 467899999999998887776 99998632111 00000000000000000 00113467779999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEEeeeeeeeeccceehhhhhheeeeeecC
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVAVVIFFISFFRFKLSAYLYDLFRGVVNK 116 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (124)
.|.|.|.+.+..+.. ...+.|.|..+|.+...+.......-...+.|.+.|
T Consensus 94 ~G~Y~C~~~~~~~~~-~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g 144 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKA-QGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSG 144 (248)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEECC--------CEEEEEEEE
T ss_pred CeEEEEEEEeCCccc-eeEEEEEEecCCceEEecCCccccCCCcEEEEEEcc
Confidence 999999999987765 567888888777655443321111112235565555
No 185
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.07 E-value=2.5e-09 Score=67.42 Aligned_cols=87 Identities=24% Similarity=0.484 Sum_probs=60.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+..|+.+.|.|.+.+.|. .+.|++ +|..+... ........+.. ....|..++..|.|.|.|.+.|..|...
T Consensus 15 ~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~-----~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~~~n~~g~~~ 87 (291)
T 2wim_A 15 ELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST-----QRVVVQKEGVR-SRLTIYNANIEDAGIYRCQATDAKGQTQ 87 (291)
T ss_dssp EEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCB-----TTEEEEEETTE-EEEEECSCCGGGCEEEEEEEECSSSCEE
T ss_pred EecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCC-----CcEEEecCCCE-EEEEEccCCcccCEEEEEEEecccCceE
Confidence 4678999999999998774 899999 66554421 12222222222 2334677799999999999999888765
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
+..+.|.|..++.+.
T Consensus 88 ~~~~~l~v~~~~~~~ 102 (291)
T 2wim_A 88 EATVVLEIYQKLTFR 102 (291)
T ss_dssp EEEEEEEEECCCBCC
T ss_pred EEEEEEEecCCcceE
Confidence 566777776665543
No 186
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.07 E-value=4.2e-10 Score=68.29 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=53.7
Q ss_pred cCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCC-CccCCeEEEEEeEeCCccceeee
Q psy8666 5 KNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGK-KEQDGGVYWCLARNSVGTAVSRN 83 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~d~g~y~C~~~~~~~~~~~~~ 83 (124)
+|+.+.|.|. +.|.|.+.|+|++..+.... .........+.+ .|..+ +.+|.|.|.|.+.|..|...+..
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~---~~~~~~~~~~~L----~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~ 197 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDE---DDKNIGSDEDHL----SLKEFSELEQSGYYVCYPRGSKPEDANFY 197 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCT---TCTTEEEETTEE----EETTCCHHHHCEEEEEEETTSCGGGSSCE
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCcc---CCceEecCCCEE----EEeeCCccccCEEEEEEeccCCCCceeEE
Confidence 7999999998 77889999999998875321 011111123333 46788 88999999999999998644555
Q ss_pred EEEEE
Q psy8666 84 ATLQV 88 (124)
Q Consensus 84 ~~l~v 88 (124)
+.|.+
T Consensus 198 l~l~~ 202 (204)
T 1sy6_A 198 LYLRA 202 (204)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 187
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.07 E-value=3.7e-10 Score=72.55 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=58.0
Q ss_pred EecCCCEEEEEeeeccCCCe-EEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEc-CCCccCCeEEEEEeEeCCccce
Q psy8666 3 VAKNEPVTLNCKAEGKPEPT-IEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVH-GKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+..|+.+.|.|.+.+.|.|. +.|++++..+... . ......+ .|. .+..+|.|.|.|.+.|..|..
T Consensus 244 ~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~------~--~~~~~~L----~i~~~v~~~d~G~Y~C~a~N~~G~~- 310 (331)
T 3u83_A 244 YLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG------V--EAQNRTL----FFKGPINYSLAGTYICEATNPIGTR- 310 (331)
T ss_dssp BTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT------E--EEETTEE----EECSCCCGGGCEEEEEEEEETTEEE-
T ss_pred EeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc------c--eecCcEE----EEeCCCccccCeEEEEEEEeccccc-
Confidence 45689999999999999998 9999998766521 1 1223333 344 568999999999999999987
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
+..+.|.|...+.
T Consensus 311 ~~~~~l~V~~~~~ 323 (331)
T 3u83_A 311 SGQVEVNITEAAA 323 (331)
T ss_dssp EEEEEECCBC---
T ss_pred eEEEEEEEeccch
Confidence 6677887766543
No 188
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.07 E-value=3e-09 Score=62.96 Aligned_cols=80 Identities=16% Similarity=0.217 Sum_probs=55.7
Q ss_pred EEecCCCEEEEEeeeccCCC--eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP--TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p--~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+.+|+.+.|.|.+.+.|.| .+.|+|++..+..... ..... .+ .+. +..|.|.|.|.+.|..
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~---------~~~~~-~l-~i~--~~~d~G~Y~C~~~n~~--- 72 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL---------PGQKT-EF-KVD--SDDQWGEYSCVFLPEP--- 72 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC---------CCSEE-EE-EEC--GGGCCEEEEEEEESTT---
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc---------cCCcE-EE-EEe--chhhCeEEEEEEECCc---
Confidence 46789999999999887777 8999999988764310 01111 11 222 5889999999999822
Q ss_pred eeeeEEEEEEeeeeeeeec
Q psy8666 80 VSRNATLQVAVVIFFISFF 98 (124)
Q Consensus 80 ~~~~~~l~v~~~~~~~~~~ 98 (124)
.....|.|..+|.+...+
T Consensus 73 -~~~~~l~V~~~P~~~~~~ 90 (184)
T 3b5h_A 73 -MGTANIQLHGPPRVKAVK 90 (184)
T ss_dssp -SCEEEEEECCSCCCEESC
T ss_pred -CcEEEEEEecCCceeecC
Confidence 346788888777665443
No 189
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.06 E-value=1.5e-09 Score=66.55 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=53.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceE-EEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-c
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQR-VILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT-A 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~-~ 79 (124)
.+.+|+++.|.|.+.+ +.+.+.|+|+|..+.... ... ....... ....|..++.+|.|.|.|.+.|..+. .
T Consensus 19 ~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~----~~~~~~~~~~~--~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREI----GRRLKFWNETD--PEFVIDHMDANKAGRYQCQYRIGHYRFR 91 (218)
T ss_dssp EEETTCCEEEEECCCT-TCSEEEEEEEETTEEEEC----SEECC----CC--CEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred ccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccc----cccCCCCccee--eEEEEcccccccCEEEEEEEEcCCCcee
Confidence 4678999999999876 678899999987554210 000 0011110 01245677999999999999997652 2
Q ss_pred eeeeEEEEEEe
Q psy8666 80 VSRNATLQVAV 90 (124)
Q Consensus 80 ~~~~~~l~v~~ 90 (124)
.+..+.|.|..
T Consensus 92 ~s~~~~l~V~~ 102 (218)
T 1uct_A 92 YSDTLELVVTG 102 (218)
T ss_dssp ECCCEEEEEEC
T ss_pred ecCCEEEEEcC
Confidence 34567777764
No 190
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.06 E-value=8.4e-10 Score=65.74 Aligned_cols=72 Identities=21% Similarity=0.170 Sum_probs=52.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-ce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT-AV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~-~~ 80 (124)
.+.+|+.+.|.|.+.+ +.+.+.|+|++... ......+ .|..++..|.|.|.|.+.|..+. ..
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~------------~~~~~~L----~i~~v~~~D~G~Y~C~a~n~~g~~~~ 80 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR------------YQDQAVL----FIPAMKRSLAGRYRCSYQNGSLWSLP 80 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTCC------------EESSSEE----EESSCCGGGCEEEEEEEEETTEEBCC
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCccc------------cCcccEE----EECcCChhhCceEEEEEEcCCCccCC
Confidence 4678999999999877 77899999998641 1122333 35667999999999999998763 22
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 81 s~~~~l~V~~ 90 (184)
T 2gi7_A 81 SDQLELVATG 90 (184)
T ss_dssp CCCEEEEEES
T ss_pred CCCEEEEecC
Confidence 4566777743
No 191
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.06 E-value=7.2e-10 Score=65.45 Aligned_cols=72 Identities=28% Similarity=0.421 Sum_probs=50.8
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.+.+ .+.|++++..+.. ....+ .|..++..|.|.|.|.+.|..+.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~------------~~~~L----~i~~v~~~d~G~Y~C~~~~~~~s-- 76 (176)
T 1f2q_A 15 RIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE------------TNSSL----NIVNAKFEDSGEYKCQHQQVNES-- 76 (176)
T ss_dssp EEETTCCEEEECCTTCC----CCEEEETTEECSC------------CSSEE----EECSCCGGGCEEEEEECTTSSCC--
T ss_pred ceecCCcEEEEEeCCCCCCcceEEEEECCeECCC------------CceEE----EEeccceecCEEEEEEcCCcccc--
Confidence 57789999999999888775 6899999987652 12233 34566999999999999886543
Q ss_pred eeeEEEEEEeee
Q psy8666 81 SRNATLQVAVVI 92 (124)
Q Consensus 81 ~~~~~l~v~~~~ 92 (124)
..+.|.|..++
T Consensus 77 -~~~~l~V~~~~ 87 (176)
T 1f2q_A 77 -EPVYLEVFSDW 87 (176)
T ss_dssp -CCEEEEEECSS
T ss_pred -ccEEEEEeCcc
Confidence 35666666433
No 192
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.06 E-value=1.2e-09 Score=65.55 Aligned_cols=80 Identities=20% Similarity=0.192 Sum_probs=52.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc----c
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG----T 78 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~----~ 78 (124)
+.+|+.+.|.|.+.+ +.+.+.|+|+|..+.... ...............|..++.+|.|.|.|.+.|..+ .
T Consensus 111 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s 184 (196)
T 3p2t_A 111 VTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLC-----LRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLS 184 (196)
T ss_dssp ECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGS-----EEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEEC
T ss_pred ecCCCeEEEEEecCC-CCCEEEEEeCCCccccee-----ecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccC
Confidence 568999999999877 446899999987654210 110000011112234677799999999999999876 3
Q ss_pred ceeeeEEEEE
Q psy8666 79 AVSRNATLQV 88 (124)
Q Consensus 79 ~~~~~~~l~v 88 (124)
..+..+.|.|
T Consensus 185 ~~S~~~~l~V 194 (196)
T 3p2t_A 185 HPSDPLELIV 194 (196)
T ss_dssp CCCCCEEEEE
T ss_pred CCCCCEEEEe
Confidence 3355555554
No 193
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.06 E-value=2.9e-10 Score=71.19 Aligned_cols=69 Identities=30% Similarity=0.495 Sum_probs=53.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+|++.... ..+.+. . ++.+|.|.|.|.+.|..|.. +
T Consensus 196 ~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~-------------~~g~~~--~----v~~~d~G~Y~C~a~N~~G~~-~ 255 (265)
T 2oz4_A 196 TWPENSQQTPMCQAWGNPLPELKCLKDGTFPL-------------PIGESV--T----VTRDLEGTYLCRARSTQGEV-T 255 (265)
T ss_dssp EEETTCEECCCCCCEEESCCEEEEEETTTEEC-------------CTTSCE--E----CCGGGCEEEEEEEEETTEEE-E
T ss_pred EEcCCCeEEEEeECccCCCCeEEEEECCcccC-------------CCCcEE--E----eehhhCeEEEEEEECCCCcE-E
Confidence 46789999999999999999999999987222 122221 1 37899999999999999887 5
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 256 ~~~~l~V~~ 264 (265)
T 2oz4_A 256 REVTVNVLS 264 (265)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 677777754
No 194
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.06 E-value=2.7e-09 Score=58.36 Aligned_cols=86 Identities=21% Similarity=0.358 Sum_probs=52.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|+. .. +... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 90 (108)
T 1jhl_L 12 VASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGT-DFTLTISSLEPEDFAMYICQQ 90 (108)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSS-EEEEEECSCCTTCCSEEEEEE
T ss_pred EEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCC-EEEEEECCCCHHHCEEEEEEE
Confidence 4678999999999998888999999853 11 1100 0 00011222222222 233456888999999999999
Q ss_pred EeCCccceeeeEEEEE
Q psy8666 73 RNSVGTAVSRNATLQV 88 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v 88 (124)
.|...........|.|
T Consensus 91 ~n~~~~~fg~gt~L~V 106 (108)
T 1jhl_L 91 HNEYPWTFGGGTKLEI 106 (108)
T ss_dssp CSSSSCEECCCEEEEE
T ss_pred ccCCccEECCCEEEEE
Confidence 9864333334445544
No 195
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.05 E-value=3.4e-10 Score=69.33 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=49.2
Q ss_pred EecCCCEEEEEeeec-cCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEG-KPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~-~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|..+.+.|.+.+ .|.|.+.|+|++....... .........+...+. .+..++.+|.|.|.|.+.|..+.. .
T Consensus 130 ~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~---~~~~~~~~~g~~~v~-s~l~v~~~d~G~YtC~a~N~~g~~-~ 204 (226)
T 4f80_A 130 GYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTV---EAPVVADGVGLYAVA-ASVIMRGSSGEGVSCTIRSSLLGL-E 204 (226)
T ss_dssp EEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCE---ECCCEECTTSCEEEE-EEEEECC----CEEEEEEETTTTE-E
T ss_pred eccCCceeeEEEeccCCCCCEEEEEECCceEcCCC---ceEEEECCCCcEEEE-EEEEechhcCcEEEEEEEeCCCCe-E
Confidence 567889999999987 5999999998654332110 011112223332222 222347889999999999999887 4
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 205 ~~~~v~v~e 213 (226)
T 4f80_A 205 KTASISIAD 213 (226)
T ss_dssp EEEEECCCT
T ss_pred EEEEEEECC
Confidence 566666543
No 196
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.05 E-value=6.5e-10 Score=65.94 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=57.3
Q ss_pred EEecCCCEEEEEeeec--cCCCeEEEEeCCEEeeccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEG--KPEPTIEWYKDGELVETSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~--~p~p~v~w~k~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|...+ .+.+.+.|+|++..+..... ....+.....++.+ .|.+++.+|.|.|.|.+.|
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL----~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDL----KIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCE----EESSCCGGGCEEEEEEEEE
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcE----EEcccccccCEEEEEEEEe
Confidence 4678999999995433 45678999999975531100 01122233344544 4577799999999999999
Q ss_pred CCccc-eeeeEEEEEEee
Q psy8666 75 SVGTA-VSRNATLQVAVV 91 (124)
Q Consensus 75 ~~~~~-~~~~~~l~v~~~ 91 (124)
..|.. .+..+.|.|..+
T Consensus 83 ~~g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 83 TNGTRILNKALDLRILEM 100 (176)
T ss_dssp TTCCEEEEEEEEEEEECC
T ss_pred CCCCEEEEEEEEEEEeCC
Confidence 88875 345667777654
No 197
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.05 E-value=1.9e-09 Score=59.46 Aligned_cols=90 Identities=21% Similarity=0.233 Sum_probs=52.2
Q ss_pred EEecCCCEEEEEeee-ccCCCe----EEEEeCCEEeeccC--------CCCCceEEEccCC--c--EEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPT----IEWYKDGELVETSK--------SDAKSQRVILPTG--S--LFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~----v~w~k~g~~~~~~~--------~~~~~~~~~~~~~--~--~~~~~~i~~~~~~d 64 (124)
.+..|+++.|.|... +.+.+. +.|+|++....... .....+....... . ......|.+++.+|
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (118)
T 3udw_C 11 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVED 90 (118)
T ss_dssp EEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGG
T ss_pred EEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHH
Confidence 467899999999984 444443 89999853211000 0001122222210 0 01223457779999
Q ss_pred CeEEEEEeEe-CCccceeeeEEEEEEeee
Q psy8666 65 GGVYWCLARN-SVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 65 ~g~y~C~~~~-~~~~~~~~~~~l~v~~~~ 92 (124)
.|.|.|.+.+ ..+.. ...+.|.|..+|
T Consensus 91 ~G~Y~C~v~~~~~~~~-~~~~~L~V~~~P 118 (118)
T 3udw_C 91 EGNYTCLFVTFPQGSR-SVDIWLRVLAKP 118 (118)
T ss_dssp CEEEEEEEEEETTEEE-EEEEEEEEEC--
T ss_pred CeEEEEEEEECCCCCc-cceEEEEEEeCC
Confidence 9999999998 55544 567777776654
No 198
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.04 E-value=1.7e-09 Score=75.32 Aligned_cols=71 Identities=18% Similarity=0.391 Sum_probs=56.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|+|..+.. ...+ .|..+...|.|.|.|.+.|..|.. .
T Consensus 570 ~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------------~~~L----~i~~~~~~d~G~Y~C~a~N~~G~~-~ 631 (642)
T 1e07_A 570 SYLSGANLNLSCHSASNPSPQYSWRINGIPQQH-------------TQVL----FIAKITPNNNGTYACFVSNLATGR-N 631 (642)
T ss_pred eEEcCCcEEEEEEeccCCCCeEEEEECCEECcc-------------CceE----EECcccccCCeEEEEEEEecccCc-c
Confidence 356799999999999999999999999987652 1222 345558999999999999999987 5
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 632 ~s~~l~V~v 640 (642)
T 1e07_A 632 NSIVKSITV 640 (642)
T ss_pred eeEEEEEEE
Confidence 567666654
No 199
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.04 E-value=7.5e-09 Score=70.48 Aligned_cols=91 Identities=19% Similarity=0.291 Sum_probs=64.2
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEeCCEEe--eccCCCCCceEEEccC--CcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYKDGELV--ETSKSDAKSQRVILPT--GSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k~g~~~--~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+.+.|.|. +.|++++..+ ... ........ ........|..++..|.|.|.|.+.|..
T Consensus 222 ~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 296 (524)
T 2ec8_A 222 LLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK-----YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTF 296 (524)
T ss_dssp EEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE-----EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSS
T ss_pred eEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc-----cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecC
Confidence 367899999999999989887 9999998763 211 11111111 1122334567779999999999999999
Q ss_pred ccceeeeEEEEEEeeeeeeeec
Q psy8666 77 GTAVSRNATLQVAVVIFFISFF 98 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~~~~~ 98 (124)
|.. ...+.|.|..+|.+...+
T Consensus 297 g~~-~~~~~l~V~~~p~~~~~~ 317 (524)
T 2ec8_A 297 GSA-NVTTTLEVVDKGFINIFP 317 (524)
T ss_dssp CEE-EEEEEEEEESSCEEEEEE
T ss_pred Cce-EEEEEEEEeccCceEeec
Confidence 887 458888888777665443
No 200
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.03 E-value=2.6e-09 Score=66.37 Aligned_cols=72 Identities=26% Similarity=0.404 Sum_probs=54.4
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+.|.+ .+.|+|+|..+... ...+ .|..++..|.|.|.|.+.|..+..
T Consensus 12 ~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~------------~~~l----~i~~~~~~d~G~Y~C~~~~~~~s~- 74 (262)
T 3rjd_A 12 SVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS------------TPSY----RITSASVNDSGEYRCQRGLSGRSD- 74 (262)
T ss_dssp EEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC------------SSEE----EESSCCGGGCEEEEEEESSSCCCC-
T ss_pred EeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc------------CCeE----EEecCCcccCeEEEEEEecCCccc-
Confidence 57789999999999888887 89999999876521 1222 356668999999999998865443
Q ss_pred eeeEEEEEEeee
Q psy8666 81 SRNATLQVAVVI 92 (124)
Q Consensus 81 ~~~~~l~v~~~~ 92 (124)
.+.|.|..++
T Consensus 75 --~~~l~v~~~~ 84 (262)
T 3rjd_A 75 --PIQLEIHRGW 84 (262)
T ss_dssp --CEEEEEECSS
T ss_pred --cEEEEEeccc
Confidence 5666666544
No 201
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.03 E-value=4.2e-09 Score=65.39 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....+ .|..++..|.|.|.|.+.|..+..
T Consensus 93 ~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~----------~~~~~l----~i~~~~~~d~G~Y~C~~~n~~~~~- 157 (262)
T 3rjd_A 93 VFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF----------HWNSNL----TILKTNISHNGTYHCSGMGKHRYT- 157 (262)
T ss_dssp EEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE----------EECCCE----EESSCCGGGCEEEEEEEESSSEEE-
T ss_pred EEecCCeEEEEEEccCCCCCceEEEEECCcccccc----------CCCCeE----EEEECChhhCEEEEEEEeCCCCcc-
Confidence 35689999999999 67788899999999876521 122333 356668999999999999988655
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 158 ~~~~~l~V~~ 167 (262)
T 3rjd_A 158 SAGISVTVKE 167 (262)
T ss_dssp EECEEEEEEC
T ss_pred ccceEEEecc
Confidence 5677777765
No 202
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.03 E-value=9.3e-09 Score=61.36 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=53.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-ce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT-AV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~-~~ 80 (124)
.+.+|+++.|.|.+.+ +.+.+.|+|+|..+...... . ...... ....|.+++..|.|.|.|.+.|..+. ..
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~---~---~~~~~~-~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~ 85 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK---P---PERINK-VKFYIPDMNSRMAGQYSCIYRVGELWSEP 85 (188)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS---S---CTTCCE-EEEEESSCCGGGCEEEEEEEEETTEECCC
T ss_pred cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc---c---CCCcce-eEEEeCcCCcccCeEEEEEecCCCCCCCC
Confidence 3678999999999865 45678999999876521000 0 001111 12346778999999999999886543 22
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 86 s~~~~l~V~~ 95 (188)
T 1oll_A 86 SNLLDLVVTE 95 (188)
T ss_dssp CCCEEEEEES
T ss_pred CCceEEEecc
Confidence 5567777753
No 203
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.03 E-value=1.5e-09 Score=59.23 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=50.6
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC---ccc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV---GTA 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~---~~~ 79 (124)
+..|++++|.|...+. ...+.|||+|..+... . ....... ....|..++.+|.|.|.|.+.|.. ...
T Consensus 16 v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~-------~-~~~~~~~-~~l~I~~v~~~dsG~Y~C~~~n~~~~~~s~ 85 (105)
T 2vsd_A 16 VSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK-------E-KDKEQDA-AEFSFAVTNLEDAGTYQCRYQVSEPLWTSN 85 (105)
T ss_dssp CCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE-------E-ECTTCSE-EEEEEECCSGGGCEEEEEEEEEETTEEECC
T ss_pred cCcCCCEEEEEEcCCC-CcEEEEEECCccceee-------e-ccCCCCE-EEEEECCCCHHHCeEEEEEEEcCCCCcccC
Confidence 5679999999998754 4567899999765421 1 1111221 223456779999999999999853 233
Q ss_pred eeeeEEEEEEe
Q psy8666 80 VSRNATLQVAV 90 (124)
Q Consensus 80 ~~~~~~l~v~~ 90 (124)
.+..+.|.|..
T Consensus 86 ~Sdpl~L~V~~ 96 (105)
T 2vsd_A 86 QSDPVELVLTI 96 (105)
T ss_dssp CCCCEEECCC-
T ss_pred CCCCEEEEEEE
Confidence 45666666543
No 204
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.02 E-value=7.6e-10 Score=66.68 Aligned_cols=89 Identities=19% Similarity=0.279 Sum_probs=59.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccC-------CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSK-------SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... ....... ......+ .|..++..|.|.|.|.+.+
T Consensus 12 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~L----~i~~v~~~D~G~Y~C~~~~ 86 (212)
T 1f97_A 12 QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV-TFSSSGI----TFSSVTRKDNGEYTCMVSE 86 (212)
T ss_dssp EEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTE-EEETTEE----EESCCCGGGCEEEEEEEEE
T ss_pred EEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcE-EeeceeE----EEcccCcccCeEEEEEEEc
Confidence 46789999999999988999999999765421100 0000111 1122333 3566699999999999999
Q ss_pred CCccc-eeeeEEEEEEeeeeee
Q psy8666 75 SVGTA-VSRNATLQVAVVIFFI 95 (124)
Q Consensus 75 ~~~~~-~~~~~~l~v~~~~~~~ 95 (124)
..|.. .+..+.|.|..+|.+.
T Consensus 87 ~~g~~~~~~~~~l~V~~~p~~~ 108 (212)
T 1f97_A 87 EGGQNYGEVSIHLTVLVPPSKP 108 (212)
T ss_dssp TTSSSEEEEEEEEEEEBCCCCC
T ss_pred cCCCcccEEEEEEEEEcCCCCc
Confidence 87622 2456778887766543
No 205
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.02 E-value=5.3e-10 Score=67.19 Aligned_cols=81 Identities=19% Similarity=0.336 Sum_probs=55.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC-cc-c
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV-GT-A 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~-~~-~ 79 (124)
.+.+|+.+.|.|.+.+.|. .+.|+|+|..+..... ..........+ .|..++..|.|.|.|.+.|.. +. .
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~---~~~~~~~~~~L----~i~~v~~~D~G~Y~C~a~n~~~g~~~ 86 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITR---IPQELVKKGQF----PIPSITWEHTGRYRCYYGSDTAGRSE 86 (198)
T ss_dssp EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHT---SCHHHHTTTEE----EESSCCGGGCEEEEEEEEETTTEECC
T ss_pred cccCCCcEEEEEEecCCCc-EEEEEECCcccccccc---ccccCCcccEE----EECCCCHHHCeEEEEEEECCCCCccc
Confidence 4678999999999988765 6999999876642100 00001122333 356779999999999999987 52 2
Q ss_pred eeeeEEEEEEe
Q psy8666 80 VSRNATLQVAV 90 (124)
Q Consensus 80 ~~~~~~l~v~~ 90 (124)
.+..+.|.|..
T Consensus 87 ~s~~~~l~V~~ 97 (198)
T 1ugn_A 87 SSDPLELVVTG 97 (198)
T ss_dssp CCCCEEEEEEC
T ss_pred CCccEEEEEcc
Confidence 25567788776
No 206
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.02 E-value=1.2e-08 Score=61.37 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=52.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC----c
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV----G 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~----~ 77 (124)
.+.+|+++.|.|.+.+ +.+.+.|+|+|..+.... ...............|..++..|.|.|.|.+.+.. .
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-----~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~ 91 (201)
T 1nkr_A 18 LVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLR-----LIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQV 91 (201)
T ss_dssp EEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEE-----EECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCC
T ss_pred ccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcce-----eeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccc
Confidence 4678999999999864 778999999987543210 00000111112233567789999999999998642 1
Q ss_pred cceeeeEEEEEEe
Q psy8666 78 TAVSRNATLQVAV 90 (124)
Q Consensus 78 ~~~~~~~~l~v~~ 90 (124)
...+..+.|.|..
T Consensus 92 ~~~s~~~~l~V~~ 104 (201)
T 1nkr_A 92 SAPSDPLDIVIIG 104 (201)
T ss_dssp CCCCCCEEEEEEC
T ss_pred cCCCCCEEEEeec
Confidence 2224566777754
No 207
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.01 E-value=8.9e-09 Score=62.96 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=47.9
Q ss_pred EEecCCCEEEEEeeeccCCC---eEEEEeCCEEe-----------eccCC-CCCceEEEccCC--cEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP---TIEWYKDGELV-----------ETSKS-DAKSQRVILPTG--SLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p---~v~w~k~g~~~-----------~~~~~-~~~~~~~~~~~~--~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+.+ .+.|+|++... ..... ....+....... .......|.+++.+|
T Consensus 15 ~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 94 (226)
T 4f80_A 15 LAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASD 94 (226)
T ss_dssp EEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGG
T ss_pred EEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHH
Confidence 56789999999998776554 58999876321 11000 000111111110 112234568889999
Q ss_pred CeEEEEEeEeCCccc
Q psy8666 65 GGVYWCLARNSVGTA 79 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~ 79 (124)
.|.|.|.+.|..+..
T Consensus 95 ~G~Y~C~a~n~~~~~ 109 (226)
T 4f80_A 95 SGKYLCYFQDGDFYE 109 (226)
T ss_dssp CEEEEEEEEETTEEE
T ss_pred CeeEEEEEECCCcEE
Confidence 999999999987765
No 208
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.01 E-value=5e-10 Score=74.83 Aligned_cols=69 Identities=29% Similarity=0.459 Sum_probs=54.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+.. .+... . ++..|.|.|.|.+.|..|.. +
T Consensus 381 ~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~-------------~g~~~--~----v~~~d~G~Y~C~a~N~~G~~-~ 440 (450)
T 1z7z_I 381 TWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP-------------IGESV--T----VTRDLEGTYLCRARSTQGEV-T 440 (450)
T ss_dssp EEETTCEECCCCCCEEESCCEEEEEETTTEECC-------------TTSCE--E----CCGGGCEEEEEEEEETTEEE-E
T ss_pred eEcCCCeEEEEEecccCCCCcEEEEECCcccCC-------------CCCeE--e----EehhhCeEEEEEEEeCCCce-e
Confidence 467899999999999999999999999873321 12221 2 37899999999999999988 5
Q ss_pred eeEEEEEEe
Q psy8666 82 RNATLQVAV 90 (124)
Q Consensus 82 ~~~~l~v~~ 90 (124)
..+.|.|..
T Consensus 441 ~~~~l~V~~ 449 (450)
T 1z7z_I 441 REVTVNVLS 449 (450)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 677777754
No 209
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.01 E-value=2.5e-09 Score=64.43 Aligned_cols=89 Identities=26% Similarity=0.309 Sum_probs=58.2
Q ss_pred EEecCCCEEEEEeeeccC----CCeEEEEeC----------------CEEeeccCCCCCceEEEcc------CCcEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP----EPTIEWYKD----------------GELVETSKSDAKSQRVILP------TGSLFFLR 55 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p----~p~v~w~k~----------------g~~~~~~~~~~~~~~~~~~------~~~~~~~~ 55 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+++ +............+..... ...+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L---- 86 (214)
T 3jz7_A 11 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI---- 86 (214)
T ss_dssp EEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE----
T ss_pred EEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE----
Confidence 567899999999998776 468999983 3222210000011111111 1223
Q ss_pred EEcCCCccCCeEEEEEeEeCCccceeeeEEEEEEeeeeee
Q psy8666 56 VVHGKKEQDGGVYWCLARNSVGTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 56 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~~~~~ 95 (124)
.|.+++.+|.|.|.|.+.+..+.. +..+.|.|..+|.+.
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~ 125 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSGT 125 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCBSC
T ss_pred EEccCChhhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCCc
Confidence 456779999999999999988766 667888888776544
No 210
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.00 E-value=3.5e-11 Score=84.95 Aligned_cols=83 Identities=25% Similarity=0.451 Sum_probs=0.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.|.|.|.+.|+|+|..+.... ..... ..+.+. |..+..+|.|.|.|.+.|..|.. .
T Consensus 678 v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~-----~~~~~~~~~~L~----I~~v~~~D~G~Y~C~a~N~~G~~-~ 747 (772)
T 3v2a_R 678 TSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS-----GIVLKDGNRNLT----IRRVRKEDEGLYTCQACSVLGCA-K 747 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCCEEEEEEeCccCCCeEEEEECCeECcCCC-----CeEEcCCCcEEE----ECcCCHHHCEEEEEEEEeCCcce-e
Confidence 5679999999999999999999999998776421 11111 123333 44558999999999999999998 5
Q ss_pred eeEEEEEEeeeeee
Q psy8666 82 RNATLQVAVVIFFI 95 (124)
Q Consensus 82 ~~~~l~v~~~~~~~ 95 (124)
..+.|.|..+|...
T Consensus 748 ~~~~l~V~~~p~~~ 761 (772)
T 3v2a_R 748 VEAFFIIEGAQEKT 761 (772)
T ss_dssp --------------
T ss_pred EEEEEEEECCCCcc
Confidence 68899998877544
No 211
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.00 E-value=9.8e-09 Score=58.51 Aligned_cols=88 Identities=15% Similarity=0.229 Sum_probs=54.1
Q ss_pred EEecCCCEEEEEeeeccC---CCeEEEEeCCEE--ee--ccC--------CCCCceEEEccCC--cEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP---EPTIEWYKDGEL--VE--TSK--------SDAKSQRVILPTG--SLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p---~p~v~w~k~g~~--~~--~~~--------~~~~~~~~~~~~~--~~~~~~~i~~~~~~d 64 (124)
.+..|+++.|.|...+.+ .+.+.|++++.. +. ... .....+....... .......|.+++.+|
T Consensus 17 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 96 (139)
T 1pko_A 17 RALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSD 96 (139)
T ss_dssp EEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGG
T ss_pred EEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHH
Confidence 467899999999987654 367999997641 11 000 0001122121110 112334578889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+.. ...+.|.|..
T Consensus 97 ~G~Y~C~v~~~~~~~-~~~~~L~V~~ 121 (139)
T 1pko_A 97 EGGYTCFFRDHSYQE-EAAVELKVED 121 (139)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred CEEEEEEEEcCCCce-EEEEEEEEec
Confidence 999999999987755 5567777764
No 212
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.00 E-value=5.4e-09 Score=63.21 Aligned_cols=88 Identities=18% Similarity=0.342 Sum_probs=55.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--cc-----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TS-----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|+ |..+. .. ................ ....|.+++.+|.|.|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 89 (210)
T 1lk3_L 11 TVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTD-FTLTIDPVEADDTAIYFCQQ 89 (210)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCE-EEEEECCCCHHHCeEEEEEE
Confidence 467899999999999888889999984 22210 00 0000111111111111 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+..+........|.|..
T Consensus 90 ~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 90 SWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp CSSSSCEECCCEEEEECC
T ss_pred EcCCCceeCCCEEEEEcC
Confidence 998765434455666654
No 213
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.00 E-value=6.1e-09 Score=57.50 Aligned_cols=85 Identities=19% Similarity=0.202 Sum_probs=54.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEe-----ec---------cCCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELV-----ET---------SKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+++.|.|.....+.+.+.|||..... .. .......+.....++++. |.+++.+|.|.
T Consensus 11 ~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~----I~nvt~~D~G~ 86 (111)
T 2qsq_A 11 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLL----IQNIIQNDAGF 86 (111)
T ss_dssp EEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEE----ECSCCGGGCEE
T ss_pred eeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEE----EccCcccCCeE
Confidence 4678999999997533334568999865211 10 000112344455667665 55669999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEe
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.|.+.+..+......+.|.|..
T Consensus 87 Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 87 YTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEEec
Confidence 99999998664335566776653
No 214
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.00 E-value=1.5e-08 Score=61.44 Aligned_cols=87 Identities=15% Similarity=0.248 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCC--EEe---eccCC--------CCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDG--ELV---ETSKS--------DAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g--~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+.+.|.|.+.+. |.+.+.|+|.. ... ..... ....+........ .....|.+++.+|.|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~G~ 89 (218)
T 3s96_B 11 SFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGA-DRYLSISNIQPEDEAI 89 (218)
T ss_dssp EEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETT-EEEEEESSCCGGGCEE
T ss_pred EECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCc-eEEEEEccCCcccCEE
Confidence 56789999999999988 89999999832 110 00000 0001111111111 1224568889999999
Q ss_pred EEEEeEeCCc----cceeeeEEEEEE
Q psy8666 68 YWCLARNSVG----TAVSRNATLQVA 89 (124)
Q Consensus 68 y~C~~~~~~~----~~~~~~~~l~v~ 89 (124)
|.|.+.+..+ ......+.|.|.
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~~l~V~ 115 (218)
T 3s96_B 90 YICGVGDTIKEQFVYVFGGGTKVTVL 115 (218)
T ss_dssp EEEEEEEEETTEEEEEECCCEEEEEE
T ss_pred EEEEEecCCCCceeEEEcCcEEEEEe
Confidence 9999998765 122345677776
No 215
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.99 E-value=3.8e-09 Score=75.34 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=63.0
Q ss_pred EecCCCEEEEEeeeccCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+.+.| .+.|+++|..+.... ........... ....|..+...|.|.|.|.+.|..|.. .
T Consensus 631 ~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~----~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~N~~g~~-~ 704 (816)
T 3dmk_A 631 AQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDL----GITTSRVGRRG-SVLTIEAVEASHAGNFTCHARNLAGHQ-Q 704 (816)
T ss_dssp EESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGG----TCEEEEETTTE-EEEEEESCCGGGCEEEEEEEECSSCEE-E
T ss_pred cCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCC----CeeEEEcCCCe-eEEEEccCChhhCEEEEEEEEeCCccE-E
Confidence 5679999999998766554 899999998765321 11111111111 223456779999999999999999887 5
Q ss_pred eeEEEEEEeeeeeeeec
Q psy8666 82 RNATLQVAVVIFFISFF 98 (124)
Q Consensus 82 ~~~~l~v~~~~~~~~~~ 98 (124)
..+.|.|..+|.+...+
T Consensus 705 ~~~~l~V~~~P~~~~~~ 721 (816)
T 3dmk_A 705 FTTPLNVYVPPRWILEP 721 (816)
T ss_dssp EEEEECEEEEEEEEECC
T ss_pred EEEEEEEEeCCceeeec
Confidence 67888888888765443
No 216
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.98 E-value=1.4e-08 Score=61.04 Aligned_cols=86 Identities=19% Similarity=0.187 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeecc--------------CCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETS--------------KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|...+.+.+.+.|++++...... ......+.....++.+ .|.+++..|.|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L----~i~~v~~~D~G~ 85 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSL----LFQMITMKDMGV 85 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCE----EECSCCGGGCEE
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeE----EEccccccCCeE
Confidence 4678999999999878888899999875321110 0000112222333444 356669999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEee
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
|.|.+.+..+......+.|.|..+
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQP 109 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECC
T ss_pred EEEEEEcccCceeEEEEEEEeccC
Confidence 999999986444356677777654
No 217
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.98 E-value=5.1e-09 Score=63.34 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=53.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eeccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|.. .. +.... .....+......... ....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 90 (213)
T 3r06_A 12 PASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRD-SSFTISSLESEDIGSYYCQQ 90 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCSEEEEEE
T ss_pred EecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCE-EEEEECCCCcccCEEEEEec
Confidence 4678999999999998889999999832 11 11000 000111111111111 23456888999999999999
Q ss_pred EeCCccceeeeEEEEE
Q psy8666 73 RNSVGTAVSRNATLQV 88 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v 88 (124)
.+..+........|.|
T Consensus 91 ~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 91 YYNYPWTFGPGTKLEI 106 (213)
T ss_dssp CSSSSCEECCCEEEEE
T ss_pred ccCCceEEcCCceEEE
Confidence 9876544445566776
No 218
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.98 E-value=1.4e-09 Score=61.95 Aligned_cols=88 Identities=16% Similarity=0.334 Sum_probs=53.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT- 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~- 78 (124)
.+.+|+.+.|.|...+. +.+.|||+ +..+....+ ...++.....+.. ....|.+++.+|.|.|.|.+.|..+.
T Consensus 28 ~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~-~~~r~~~~~~~~~-~~L~I~~~~~~DsG~Y~C~a~n~~g~~ 103 (133)
T 3khq_A 28 AKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVS-EEGRIVQTQNGSV-YTLTIQNIQYEDNGIYFCKQKCDSANH 103 (133)
T ss_dssp EECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCC-TTTTEEEEEETTE-EEEEECSCCGGGCEEEEEEESSCC---
T ss_pred EEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEE-eCCCEEEEcCCCE-EEEEECCCChHHCEEEEEEEEeCCCCc
Confidence 46789999999999876 88999986 322211000 1122222222322 33456888999999999999987642
Q ss_pred --ceeeeEEEEEEeeee
Q psy8666 79 --AVSRNATLQVAVVIF 93 (124)
Q Consensus 79 --~~~~~~~l~v~~~~~ 93 (124)
.......|.|...|.
T Consensus 104 ~~~~g~gt~L~V~~~p~ 120 (133)
T 3khq_A 104 NVTDSCGTELLVLGFST 120 (133)
T ss_dssp ----CCCEEEEEC----
T ss_pred ceeECCCEEEEEEeccc
Confidence 234567888877543
No 219
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.97 E-value=1.3e-09 Score=64.71 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=44.9
Q ss_pred CCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 6 NEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 6 G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..+.|.|.+.+.|.|.+.|+|+|..+.... .+.+..+ +..|.|.|.|.+.|..|..
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~-------------~~~i~~~----~~~d~G~Y~C~a~N~~g~~ 166 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQGKEHLRSLR-------------QKTMSYQ----WTNLRAPFKCKAVNRVSQE 166 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEETTEEEEEES-------------SSEEEEE----CSCCSSCEEEEEEETTEEE
T ss_pred CCcEEEEEEecCCCCcEEEEEECCEECCCCC-------------cEEEEEE----EccCCeEEEEEEEecCCCc
Confidence 4568999999999999999999998876321 1222233 7899999999999999876
No 220
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.97 E-value=4.8e-10 Score=67.41 Aligned_cols=83 Identities=30% Similarity=0.544 Sum_probs=56.0
Q ss_pred EEecCCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCC----CceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEeC
Q psy8666 2 VVAKNEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDA----KSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARNS 75 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~----~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~ 75 (124)
.+..|+.+.|.|.+ .+.|.|.+.|++++..+....... ...... .....+ .|..++.+|.|.|.|.+.|.
T Consensus 118 ~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~ 193 (209)
T 1nbq_A 118 SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGEL----VFDPLSASDTGEYSCEARNG 193 (209)
T ss_dssp EEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCE----EESSCCGGGCCCEEEEEECS
T ss_pred ceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceE----EEEeccccCCeEEEEEEeCC
Confidence 35679999999996 899999999999998765432110 001111 122333 35666899999999999999
Q ss_pred Cccc-eeeeEEEEE
Q psy8666 76 VGTA-VSRNATLQV 88 (124)
Q Consensus 76 ~~~~-~~~~~~l~v 88 (124)
.|.. .+..+.|.|
T Consensus 194 ~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 194 YGTPMTSNAVRMEA 207 (209)
T ss_dssp SSCCEECCCBCCEE
T ss_pred cCcccccccEEEEE
Confidence 9877 344444443
No 221
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.97 E-value=9.1e-09 Score=62.23 Aligned_cols=87 Identities=14% Similarity=0.292 Sum_probs=55.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee---cc-CC---CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE---TS-KS---DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~---~~-~~---~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|. +.... .. .. ....+......... ....|.+++.+|.|.|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 89 (213)
T 3mj8_L 11 SVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNM-ATLTISKAQAGDEADYYCQS 89 (213)
T ss_dssp EEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCE-EEEEECCCChhhCEEEEEEe
Confidence 577899999999999889999999982 22111 00 00 00111111111111 23456888999999999999
Q ss_pred EeCCc--cceeeeEEEEEE
Q psy8666 73 RNSVG--TAVSRNATLQVA 89 (124)
Q Consensus 73 ~~~~~--~~~~~~~~l~v~ 89 (124)
.+..+ ......+.|.|.
T Consensus 90 ~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 90 WDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp EETTTTEEEEBCCEEEEEE
T ss_pred ccCCcceeEEcCceEEEEe
Confidence 99887 233556777777
No 222
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.97 E-value=5.8e-09 Score=68.01 Aligned_cols=86 Identities=10% Similarity=-0.011 Sum_probs=56.7
Q ss_pred EEecCCCEEEEEeeec-----cCCCeEEEEeCCEEeeccCCC---CCceEEEc-----------cCCcEEEEEEEcCCCc
Q psy8666 2 VVAKNEPVTLNCKAEG-----KPEPTIEWYKDGELVETSKSD---AKSQRVIL-----------PTGSLFFLRVVHGKKE 62 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-----~p~p~v~w~k~g~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~i~~~~~ 62 (124)
.+.+|+.+.|.|.+.+ .|.|.+.|+++|..+...... ........ ..+. ....|..++.
T Consensus 187 ~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~ 264 (363)
T 1wio_A 187 YKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLP--LHLTLPQALP 264 (363)
T ss_dssp EEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSS--CEEEESSBCG
T ss_pred EEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCc--eEEEEccCCc
Confidence 3567999999998877 778899999998765431000 00111110 1111 1234567789
Q ss_pred cCCeEEEEEeEeC--CccceeeeEEEEEEe
Q psy8666 63 QDGGVYWCLARNS--VGTAVSRNATLQVAV 90 (124)
Q Consensus 63 ~d~g~y~C~~~~~--~~~~~~~~~~l~v~~ 90 (124)
.|.|.|.|.+.|. .|.. +..+.|.|..
T Consensus 265 ~d~G~Y~C~a~n~~~~g~~-~~~~~l~V~~ 293 (363)
T 1wio_A 265 QYAGSGNLTLALEAKTGKL-HQEVNLVVMR 293 (363)
T ss_dssp GGCEEEEEEECBTTTTCCE-EEEEEEEEEE
T ss_pred CcCcEEEEEEEEhhhcCeE-EEEEeEEEEE
Confidence 9999999999999 8866 5677777763
No 223
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.96 E-value=3e-09 Score=67.92 Aligned_cols=68 Identities=24% Similarity=0.366 Sum_probs=51.1
Q ss_pred EecCCCEEEEEee------eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeE-eC
Q psy8666 3 VAKNEPVTLNCKA------EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLAR-NS 75 (124)
Q Consensus 3 ~~~G~~~~l~C~~------~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~-~~ 75 (124)
+..|+.+.|.|.+ .+.|.|.+.|+|++..+.... .........+ .|..++..|.|.|.|.+. |.
T Consensus 115 ~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~-----~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~~n~ 185 (315)
T 1itb_B 115 LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN-----IHFSGVKDRL----IVMNVAEKHRGNYTCHASYTY 185 (315)
T ss_dssp EETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS-----SSEEEETTEE----EESSCCGGGCEEEEEEEEEEE
T ss_pred EecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc-----ceEeecCceE----EEEeceehhCcEEEEEEEcCC
Confidence 5679999999998 788999999999998875321 1122233333 356779999999999999 77
Q ss_pred Cccc
Q psy8666 76 VGTA 79 (124)
Q Consensus 76 ~~~~ 79 (124)
.|..
T Consensus 186 ~g~~ 189 (315)
T 1itb_B 186 LGKQ 189 (315)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7765
No 224
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.96 E-value=9e-09 Score=62.27 Aligned_cols=89 Identities=18% Similarity=0.205 Sum_probs=54.6
Q ss_pred EecCCCEEEEEeeecc-CC--CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 3 VAKNEPVTLNCKAEGK-PE--PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~-p~--p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..|+.+.|.|.+.+. |. +.+.|+|++..+........... ...........+......|.|.|.|.+.|..+..
T Consensus 103 ~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~--~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 103 LEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADR--KSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp EETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSS--CCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCC
T ss_pred EcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCc--CcceEEEEEEEEEeeeccCCCeEEEEEEccccCC
Confidence 5689999999999875 43 36899999987753210000000 0001111222344446677899999999987652
Q ss_pred ------eeeeEEEEEEeeee
Q psy8666 80 ------VSRNATLQVAVVIF 93 (124)
Q Consensus 80 ------~~~~~~l~v~~~~~ 93 (124)
....+.|.|.++|.
T Consensus 181 ~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 181 DSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TTSCSEEEEEEECCEECCC-
T ss_pred CCcceeEeeEEEEEEecCCC
Confidence 34567788877764
No 225
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.96 E-value=1.1e-09 Score=65.78 Aligned_cols=87 Identities=24% Similarity=0.344 Sum_probs=55.7
Q ss_pred CEEecCCCEEEEEeee----ccCCCeEEEEeCCEEeeccCCCC-------CceEEE-c-cCCcEEEEEEEcCCCccCCeE
Q psy8666 1 MVVAKNEPVTLNCKAE----GKPEPTIEWYKDGELVETSKSDA-------KSQRVI-L-PTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~----~~p~p~v~w~k~g~~~~~~~~~~-------~~~~~~-~-~~~~~~~~~~i~~~~~~d~g~ 67 (124)
+.+..|+.+.|.|.+. +.|.+.+.|++++..+....... ..+... . ....+ .|.+++.+|.|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L----~I~~v~~~D~G~ 79 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSI----VILALRPSDEGT 79 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEE----EECSCCGGGCEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEE----EEecccchhCeE
Confidence 3578899999999985 44678899999988763110000 001111 1 12233 456779999999
Q ss_pred EEEEeEeCCccce----eeeEEEEEEee
Q psy8666 68 YWCLARNSVGTAV----SRNATLQVAVV 91 (124)
Q Consensus 68 y~C~~~~~~~~~~----~~~~~l~v~~~ 91 (124)
|.|.+.+..+... ...+.|.|..+
T Consensus 80 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 80 YECVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEEEcCCCCccccccccEEEEEEcCC
Confidence 9999999776542 23556666554
No 226
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.96 E-value=9.3e-10 Score=70.81 Aligned_cols=87 Identities=28% Similarity=0.427 Sum_probs=58.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe----CCEEeeccCCCCCceEEEccCC------cEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK----DGELVETSKSDAKSQRVILPTG------SLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k----~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+..|+.+.|.|.+.+.|.|.+.|+| +|..+..... ......... .......|..++..|.|.|.|.
T Consensus 233 ~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 309 (334)
T 1ry7_B 233 TAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGT---PYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCL 309 (334)
T ss_dssp EEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSS---BCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEE
T ss_pred EEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCC---eeEEEeecCccccccccccEEEEccCCHHHCEEEEEE
Confidence 35679999999999999999999999 5655442210 000000000 0001124566689999999999
Q ss_pred eEeCCccceeeeEEEEEEeee
Q psy8666 72 ARNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 72 ~~~~~~~~~~~~~~l~v~~~~ 92 (124)
+.|..|.. ...+.|.|...+
T Consensus 310 a~N~~G~~-~~~~~l~V~~~~ 329 (334)
T 1ry7_B 310 AGNSIGFS-HHSAWLVVLPAE 329 (334)
T ss_dssp EEESSCCE-EEEEEEEEECSC
T ss_pred EeCCCCeE-EEEEEEEEEECC
Confidence 99999987 567788876644
No 227
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.96 E-value=9.5e-09 Score=72.79 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=64.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEE-EE--eCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIE-WY--KDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~-w~--k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+..|+.+.|.|.+.|.|.|.+. |+ ++|..+... ...............|..+...|.|.|.|.+.|..|.
T Consensus 175 ~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~------~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~ 248 (731)
T 2v5y_A 175 EVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK------EIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGV 248 (731)
T ss_dssp EEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE------EEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEE
T ss_pred EEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc------ceEEeccccceEEEEEcccccccCeEEEEEEECCCCC
Confidence 46789999999999999999987 77 677665421 1111122222234456778999999999999999997
Q ss_pred ceeeeEEEEEEeeeeeeeec
Q psy8666 79 AVSRNATLQVAVVIFFISFF 98 (124)
Q Consensus 79 ~~~~~~~l~v~~~~~~~~~~ 98 (124)
..+....|.|..+|.++..+
T Consensus 249 ~~s~~~~l~V~~~P~~~~~p 268 (731)
T 2v5y_A 249 GISNYAELVVKEPPVPIAPP 268 (731)
T ss_dssp EECCCEEEEEECCCCBSSCC
T ss_pred cceeeEEEEEecCCCCCCCc
Confidence 43667788888777654433
No 228
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.96 E-value=9.9e-09 Score=66.17 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=56.5
Q ss_pred EEecCCCEEEEEeeeccC---CC-eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCe-EEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP---EP-TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGG-VYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p---~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g-~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+.+.| .| .+.|++++..+....... ................|..++.+|.| .|.|.+.|..
T Consensus 239 ~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~ 317 (329)
T 3oq3_B 239 NVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGV-YSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYY 317 (329)
T ss_dssp EECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSE-EEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSS
T ss_pred EEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCce-eeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecC
Confidence 456899999999999988 77 789999988643211000 00000111122334456788999999 9999999999
Q ss_pred ccceeeeEEEEE
Q psy8666 77 GTAVSRNATLQV 88 (124)
Q Consensus 77 ~~~~~~~~~l~v 88 (124)
|.. ...+.|.|
T Consensus 318 G~~-~~~~~l~v 328 (329)
T 3oq3_B 318 FDK-TLTTTVVL 328 (329)
T ss_dssp CEE-EEEEEEEE
T ss_pred Cce-EEEEEEEe
Confidence 887 44555544
No 229
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.96 E-value=1.5e-08 Score=61.30 Aligned_cols=88 Identities=17% Similarity=0.242 Sum_probs=54.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEe---eccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELV---ETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~---~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|+. ... .... .....+......... ....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 90 (213)
T 3nl4_L 12 SEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTD-FTLTISDLECADAATYYCQS 90 (213)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEECSCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCE-EEEEECCCChHHCEEEEEec
Confidence 4678999999999999899999999842 111 1000 000111111111111 23456788999999999999
Q ss_pred EeCCcc--ceeeeEEEEEEe
Q psy8666 73 RNSVGT--AVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~--~~~~~~~l~v~~ 90 (124)
.+..+. .......|.|..
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 91 TYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp CCSSTTTCEECCCEEEEEEC
T ss_pred CCCCceeEEeCCCeEEEEeC
Confidence 997663 334455666643
No 230
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.95 E-value=5.4e-09 Score=67.20 Aligned_cols=92 Identities=17% Similarity=0.316 Sum_probs=56.0
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEEee----ccCCCCCceEEEccCC----cEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGELVE----TSKSDAKSQRVILPTG----SLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~~~----~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+. |.|.+.|+|++.... ........+....... .......|.+++.+|.|.|.|.+
T Consensus 14 ~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 93 (327)
T 2wng_A 14 SVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVK 93 (327)
T ss_dssp EEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEE
T ss_pred EEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEe
Confidence 56789999999999887 889999999874311 1000000111111000 11112345777999999999999
Q ss_pred EeCCccc----eeeeEEEEEEeeee
Q psy8666 73 RNSVGTA----VSRNATLQVAVVIF 93 (124)
Q Consensus 73 ~~~~~~~----~~~~~~l~v~~~~~ 93 (124)
.|..+.. .+..+.|.|..+|.
T Consensus 94 ~n~~~~~~~~~~~~~~~l~V~~~p~ 118 (327)
T 2wng_A 94 FRKGSPDTEFKSGAGTELSVRAKPS 118 (327)
T ss_dssp EESSTTCEEEEECCCEEEEEEBCCC
T ss_pred ecCCCcceeEeecCcEEEEEEecCC
Confidence 9976542 12346777766543
No 231
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.95 E-value=9.5e-10 Score=73.98 Aligned_cols=84 Identities=21% Similarity=0.392 Sum_probs=56.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.+.|.+. |.|.+.|++++....... ...........+.+ .|..++.+|.|.|.|.+.|..|.. .
T Consensus 363 ~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~g~L----~i~~v~~~D~G~Y~C~a~N~~G~~-~ 434 (452)
T 3zyi_A 363 NISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHA-SRHPRISVLNDGTL----NFSHVLLSDTGVYTCMVTNVAGNS-N 434 (452)
T ss_dssp ECCTTSCCEECCBCC--TTSEEEEECTTSCEECSS-CCCSSCEECTTSCE----ECSSCCTTCCEEEEEEEECSSCEE-E
T ss_pred cccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccC-CCCCCEEECCCCeE----EEeecCHHHCEEEEEEEEcCCCcE-E
Confidence 456899999999987 999999999544333211 01112233444554 456779999999999999999987 5
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|...+.
T Consensus 435 ~~~~l~v~~~~~ 446 (452)
T 3zyi_A 435 ASAYLNVSTAGT 446 (452)
T ss_dssp EEEEEEC-----
T ss_pred EEEEEEEEcccc
Confidence 677787766543
No 232
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.95 E-value=4.6e-09 Score=67.98 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=54.5
Q ss_pred EecCCCEEEEEee-----eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC-
Q psy8666 3 VAKNEPVTLNCKA-----EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV- 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~-----~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~- 76 (124)
+..|+.+.|.|.. .+.|.|.+.|+|++..+... .........+ .|..++.+|.|.|.|.+.|..
T Consensus 132 ~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~------~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~~ 201 (349)
T 4dep_C 132 YIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF------NNVIPEGMNL----SFLIALISNNGNYTCVVTYPEN 201 (349)
T ss_dssp ETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC------SSEEEETTEE----EEESCCGGGCEEEEEEEEEEET
T ss_pred eecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc------cceeecCCEE----EEeeeeecCCcEEEEEEEEeeC
Confidence 4578899999974 67899999999999877531 1112222334 345569999999999999986
Q ss_pred ccc--eeeeEEEEEEe
Q psy8666 77 GTA--VSRNATLQVAV 90 (124)
Q Consensus 77 ~~~--~~~~~~l~v~~ 90 (124)
+.. .+..+.|.|..
T Consensus 202 g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 202 GRTFHLTRTLTVKVVG 217 (349)
T ss_dssp TEEEEEEEEEEEEEEC
T ss_pred CEEEEEEEEEEEEEEc
Confidence 443 24566666655
No 233
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.95 E-value=7e-10 Score=66.29 Aligned_cols=59 Identities=20% Similarity=0.469 Sum_probs=45.2
Q ss_pred cCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+ |.|.+.|+|+|..+.... .....+.+ ..++..|.|.|.|.+.|..|..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~---------~~~~~L~i----~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGSIISPLN---------ATKNTWNL----GNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTEECCCSS---------CCSSCCEE----EETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC---CCCeEEEEECCEECcccC---------CCcceEEE----CCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999988 889999999999876321 12334433 4448999999999999987654
No 234
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.94 E-value=5.1e-09 Score=63.14 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=47.5
Q ss_pred CCCEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceeeeE
Q psy8666 6 NEPVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSRNA 84 (124)
Q Consensus 6 G~~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 84 (124)
++.+.|.|.+.+. |.+.+.|+|++..+... ........+.. ....|..++.+|.|.|.|.+.|..+.. ...+
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~-----~~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~~~n~~~~~-~~~~ 89 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-----DRVKTGVTGEQ-IWLQINEPTPNDKGKYVMELFDGKTGH-QKTV 89 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCC-----SSEEEEEETTE-EEEEEESCCGGGCEEEEEEEECSSCEE-EEEE
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCC-----CeEEEEEeCCE-EEEEECCCCcccCEEEEEEEecCCcce-EEEE
Confidence 4445566666553 58899999999887642 12222222222 223456779999999999999987765 3444
Q ss_pred EEE
Q psy8666 85 TLQ 87 (124)
Q Consensus 85 ~l~ 87 (124)
.|.
T Consensus 90 ~l~ 92 (212)
T 2r15_A 90 DLS 92 (212)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 235
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.94 E-value=1.3e-09 Score=66.85 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=54.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC----c
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV----G 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~----~ 77 (124)
.+.+|+.+.|.|...+.|.+.+.|+|+|..+... ......... ..|..++.+|.|.|.|.+.+.. .
T Consensus 116 ~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~------~~~~~~~~~----L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 185 (218)
T 1uct_A 116 VLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ------HQSGEHPAN----FSLGPVDLNVSGIYRCYGWYNRSPYLW 185 (218)
T ss_dssp EECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS------EEECSSSEE----EECCSCCGGGCEEEEEEEECTTSTTEE
T ss_pred ccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc------ccCCCccCE----EEEccCCcccCEEEEEEEEcCCCCCcC
Confidence 3568999999997666778899999999765421 111111222 2456779999999999999853 2
Q ss_pred cceeeeEEEEEEeee
Q psy8666 78 TAVSRNATLQVAVVI 92 (124)
Q Consensus 78 ~~~~~~~~l~v~~~~ 92 (124)
...+..+.|.|...+
T Consensus 186 s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 186 SFPSNALELVVTDSI 200 (218)
T ss_dssp CCCCCCEEEEEC---
T ss_pred CCCCCcEEEEEecCC
Confidence 334667788887654
No 236
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.94 E-value=7.6e-09 Score=64.04 Aligned_cols=87 Identities=18% Similarity=0.356 Sum_probs=55.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe--CCEEeeccC-------CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK--DGELVETSK-------SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k--~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.|.|.+.|+| ++..+.... .....+........ .....|..++.+|.|.|.|.+
T Consensus 146 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a 224 (247)
T 2ghw_B 146 SLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGT-DFTLTISRLEPEDFAVYYCQQ 224 (247)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSS-EEEEEECSCCGGGCEEEEEEE
T ss_pred EecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCC-eEEEEECcCCHHHCEEEEEEE
Confidence 35689999999999999989999999 554331100 00011111111222 223456788999999999999
Q ss_pred EeCCccceeeeEEEEEE
Q psy8666 73 RNSVGTAVSRNATLQVA 89 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~ 89 (124)
.+......+....|.|.
T Consensus 225 ~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 225 RSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CSSSSCEECCCEEEEEC
T ss_pred ccCCCceEcCCEEEEEC
Confidence 98655444556666664
No 237
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.94 E-value=3.5e-09 Score=58.10 Aligned_cols=74 Identities=23% Similarity=0.440 Sum_probs=47.7
Q ss_pred EecCCCEEEEEeeeccCCC-----eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 3 VAKNEPVTLNCKAEGKPEP-----TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p-----~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
+.+|++++|.|...+.+.+ .+.|+|+|..+.. ......+ .|..++..|.|.|.|.+.+..+
T Consensus 19 v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~----------~~~~~~l----~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS----------RGLSSEF----QIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp CBTTCCEEEEEEC---------CCEEEEEETTEEEEE----------EESCCEE----EESSCCGGGCEEEEEEEECTTS
T ss_pred CCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC----------CCcccEE----EeCccCcccCeEEEEEEEeCCC
Confidence 5679999999998765444 3899999987642 1112222 3566799999999999998754
Q ss_pred c--ceeeeEEEEEEe
Q psy8666 78 T--AVSRNATLQVAV 90 (124)
Q Consensus 78 ~--~~~~~~~l~v~~ 90 (124)
. ..+..+.|.|..
T Consensus 85 ~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 85 QVWKQSPQLEIRVQG 99 (108)
T ss_dssp SSEEECCCEEECCBC
T ss_pred ceeccCCCEEEEEEe
Confidence 2 235566666544
No 238
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.94 E-value=1.6e-09 Score=70.12 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=57.7
Q ss_pred CEEecCCCEEEEEeeeccC-----------CCeEEEEeCCEEee--ccCC-CCCceEEEccCCcEEEEEEEcCCCccCCe
Q psy8666 1 MVVAKNEPVTLNCKAEGKP-----------EPTIEWYKDGELVE--TSKS-DAKSQRVILPTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p-----------~p~v~w~k~g~~~~--~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~d~g 66 (124)
+.+.+|+.+.|.|.+.+.| .+.+.|+|++.... .... ...........+.+ .|..++..|.|
T Consensus 17 v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L----~i~~~~~~D~G 92 (349)
T 4dep_C 17 IQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVL----WFRPTLLNDTG 92 (349)
T ss_dssp CEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEE----EESSCCGGGCE
T ss_pred EEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEE----EEccCChhhCE
Confidence 4578999999999998655 48999999874211 0000 00111222233433 35677999999
Q ss_pred EEEEEeEeCCccceeeeEEEEEEeee
Q psy8666 67 VYWCLARNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 67 ~y~C~~~~~~~~~~~~~~~l~v~~~~ 92 (124)
.|.|.+.|..+.. ...+.|.|..++
T Consensus 93 ~Y~C~a~n~~~~~-~~~~~l~V~~~~ 117 (349)
T 4dep_C 93 NYTCMLRNTTYCS-KVAFPLEVVQKD 117 (349)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEECCC
T ss_pred EEEEEEecCCceE-EEEEEEEEecCC
Confidence 9999999987766 456777777654
No 239
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.93 E-value=4.2e-08 Score=53.69 Aligned_cols=86 Identities=15% Similarity=0.321 Sum_probs=50.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eeccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||+. .. +.... .....+........ .....|.+++.+|.|.|.|.+
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 92 (109)
T 2q20_A 14 SASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGT-DFTFTISSLQPEDIATYYCQQ 92 (109)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEEEEEEE
T ss_pred EecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCC-EEEEEECCCChhhCEEEEEEE
Confidence 4678999999999988778889999853 21 11000 00011111111111 223456888999999999999
Q ss_pred EeCCccceeeeEEEEE
Q psy8666 73 RNSVGTAVSRNATLQV 88 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v 88 (124)
.+...........|.|
T Consensus 93 ~~~~~~~fg~gT~L~V 108 (109)
T 2q20_A 93 YDNLPYTFGQGTKLEI 108 (109)
T ss_dssp CSSSSCCBCCCEEEEE
T ss_pred eeCCcceECCCEEEEE
Confidence 8753222233444443
No 240
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.93 E-value=1.5e-08 Score=55.41 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=46.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--E---Eeecc--CC--CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--E---LVETS--KS--DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~---~~~~~--~~--~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||.. . .+... .. ....+........ .....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 90 (108)
T 1qfw_M 12 SMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSAT-DFTLTISSVQAEDFADYHCGQ 90 (108)
T ss_dssp ECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSS-EEEEEESSCCTTCCSEEEEEE
T ss_pred EEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCC-EEEEEECCCChhhCEEEEEEE
Confidence 4678999999999988777889999853 1 11100 00 0011222222222 234457888999999999999
Q ss_pred EeCC
Q psy8666 73 RNSV 76 (124)
Q Consensus 73 ~~~~ 76 (124)
.+..
T Consensus 91 ~~~~ 94 (108)
T 1qfw_M 91 TYNH 94 (108)
T ss_dssp CSSS
T ss_pred ccCC
Confidence 8753
No 241
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.93 E-value=3.1e-08 Score=54.47 Aligned_cols=72 Identities=21% Similarity=0.362 Sum_probs=45.2
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeC--CEEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKD--GELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~--g~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+++.|.|...+. +.+.+.|||+ +....... ....+... ...........|.+++.+|.|.|.|.+.+
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 11 TKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTI-SIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp EECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEEC-CSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEee-EeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 56789999999998765 5678999985 32111000 00111111 11112233455788899999999999988
No 242
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.93 E-value=1.5e-09 Score=74.78 Aligned_cols=87 Identities=31% Similarity=0.466 Sum_probs=60.2
Q ss_pred EEecCCCEEEEEee-eccCCCeEEEEeCCEEeeccC--C-----CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeE
Q psy8666 2 VVAKNEPVTLNCKA-EGKPEPTIEWYKDGELVETSK--S-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLAR 73 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~ 73 (124)
.+..|+++.|.|.+ .+.|.+.+.|+|++..+.... . ....+.....++++ .|.+++.+|.|.|.|.+.
T Consensus 377 ~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L----~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 377 TARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSL----FLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCE----EESSCCGGGCEEEEEEEE
T ss_pred ceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceE----EEeccccccCeEEEEEEE
Confidence 46789999999998 788999999999765221100 0 00122233344444 456779999999999999
Q ss_pred eCCccceeeeEEEEEEeee
Q psy8666 74 NSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 74 ~~~~~~~~~~~~l~v~~~~ 92 (124)
|..+......+.|.|..+|
T Consensus 453 n~~~~~~~~~~~l~V~~~~ 471 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIP 471 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCC
T ss_pred cCCCceeEEEEEEEEEcCC
Confidence 9888764567888887644
No 243
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.92 E-value=1.2e-08 Score=56.67 Aligned_cols=88 Identities=27% Similarity=0.296 Sum_probs=52.5
Q ss_pred EEecCCCEEEEEeeeccCC----CeEEEEeCC-------EEeecc--C-------CCCCceEEEccC--CcEEEEEEEcC
Q psy8666 2 VVAKNEPVTLNCKAEGKPE----PTIEWYKDG-------ELVETS--K-------SDAKSQRVILPT--GSLFFLRVVHG 59 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~----p~v~w~k~g-------~~~~~~--~-------~~~~~~~~~~~~--~~~~~~~~i~~ 59 (124)
.+..|+.+.|.|...+.+. +.+.|++++ ..+... . .....+...... ........|.+
T Consensus 16 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 95 (126)
T 1eaj_A 16 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTN 95 (126)
T ss_dssp EEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECS
T ss_pred EEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECc
Confidence 4678999999999876554 348999864 222110 0 001112222221 00001134677
Q ss_pred CCccCCeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 60 KKEQDGGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 60 ~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
++.+|.|.|.|.+.+..+.. ...+.|.|..
T Consensus 96 v~~~D~G~Y~C~v~~~~~~~-~~~~~L~V~~ 125 (126)
T 1eaj_A 96 LQLSDIGTYQCKVKKAPGVA-NKKIHLVVLV 125 (126)
T ss_dssp CCGGGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred CChHHCeEEEEEEEcCCccC-CcEEEEEEEc
Confidence 79999999999999987755 4566776653
No 244
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.92 E-value=1.4e-08 Score=60.88 Aligned_cols=85 Identities=16% Similarity=0.120 Sum_probs=56.5
Q ss_pred EEecCCCEEEEEeeec-cCCCeEEEEeCCEEeecc--CCCC-------C----ceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPTIEWYKDGELVETS--KSDA-------K----SQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~v~w~k~g~~~~~~--~~~~-------~----~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.+.+ .+.+.+.|++++..+... .... . .+.....++.+ .|.+++.+|.|.
T Consensus 9 ~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL----~I~~v~~~D~G~ 84 (193)
T 2if7_A 9 NGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSL----QLSNLKMEDTGS 84 (193)
T ss_dssp EEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCE----EECSCCGGGCEE
T ss_pred EEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEE----EECCCCcccCce
Confidence 5678999999999865 456789999998654311 0000 0 11122233444 356679999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEee
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
|.|.+.+..+.. ...+.|.|..+
T Consensus 85 Y~C~~~~~~~~~-~~~~~L~V~~~ 107 (193)
T 2if7_A 85 YRAQISTKTSAK-LSSYTLRILRQ 107 (193)
T ss_dssp EEEEEECSSCEE-EEEEEEEEECC
T ss_pred EEEEEEecCCCe-EEEEEEEEEcc
Confidence 999999988765 34677777654
No 245
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.92 E-value=5.5e-08 Score=53.50 Aligned_cols=75 Identities=13% Similarity=0.293 Sum_probs=46.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEe--eccCC---CCCceEEEccC--CcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELV--ETSKS---DAKSQRVILPT--GSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~--~~~~~---~~~~~~~~~~~--~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|...+.+ +.+.|||+. ..+ ..... ....+...... ........|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (113)
T 1h5b_A 12 SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAA 90 (113)
T ss_dssp EEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEE
T ss_pred EEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEE
Confidence 467899999999987654 689999853 211 10000 00011111111 222334567888999999999999
Q ss_pred EeCCc
Q psy8666 73 RNSVG 77 (124)
Q Consensus 73 ~~~~~ 77 (124)
.|..+
T Consensus 91 ~n~~~ 95 (113)
T 1h5b_A 91 EASSG 95 (113)
T ss_dssp ECSSS
T ss_pred ecCCC
Confidence 98754
No 246
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.92 E-value=8.6e-09 Score=61.51 Aligned_cols=72 Identities=21% Similarity=0.295 Sum_probs=51.3
Q ss_pred EEecCCCEEEEEe-eeccCC-CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCK-AEGKPE-PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~-~~~~p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+.+|+.+.|.|. ..+.|. +.+.|++++..+.... ..........+.+ .|.+++..|.|.|.|.+.+..+..
T Consensus 19 ~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~L----~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 19 RVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITM--DKRRFVSQTNGNL----YIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp EEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCC--SSSEEECTTTCCE----EESSCCGGGCEEEEEEEEEGGGTE
T ss_pred EEECCCCEEEeccccccCCCceEEEEEECCceeeeee--CCCeEEEcCCCeE----EECcCCcccCeEEEEEEEecCCCc
Confidence 4778999999999 888888 9999999987654210 1112222234444 356669999999999999976544
No 247
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.91 E-value=4.2e-09 Score=63.99 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=49.3
Q ss_pred EEecC--CCEEEEEeeeccCCCeEEEEeC---CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKN--EPVTLNCKAEGKPEPTIEWYKD---GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G--~~~~l~C~~~~~p~p~v~w~k~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+.+| +.+.|.|.+.+ |.+.+.|+++ +..+... ..........+ .|..++.+|.|.|.|.+.|..
T Consensus 18 ~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~-----~~~~~~~~~~l----~I~~v~~~D~G~Y~C~a~n~~ 87 (213)
T 2x1w_L 18 YITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG-----NRISWDSKKGF----TIPSYMISYAGMVFCEAKIND 87 (213)
T ss_dssp EECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS-----SSCEEETTTEE----EEEGGGTTTCSEEEEEEC---
T ss_pred EEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC-----CcccccCCccE----EEccCChhcCceEEEEEEECC
Confidence 46779 99999999876 7789999884 5544321 11222233334 355669999999999999854
Q ss_pred ccceeeeEEEEEE
Q psy8666 77 GTAVSRNATLQVA 89 (124)
Q Consensus 77 ~~~~~~~~~l~v~ 89 (124)
+...+..+.|.|.
T Consensus 88 ~~~~s~~~~l~v~ 100 (213)
T 2x1w_L 88 ESYQSIMYIVVVV 100 (213)
T ss_dssp -CEECCCEEEEEC
T ss_pred eeEEEEEEEEEEe
Confidence 4443434566663
No 248
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.91 E-value=1.7e-09 Score=70.39 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=60.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCe-EEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGG-VYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g-~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.+.|.+.+.|.|.+.|++++..+..... . . .........|..++..|.| .|.|.+.|..|..
T Consensus 169 ~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~----~---~-~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~- 239 (347)
T 2ifg_A 169 SVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM----K---S-GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRA- 239 (347)
T ss_dssp CCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC----C---C-CCSSEEEEEEESCCSTTTTCCEEECCEETTEEC-
T ss_pred EEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc----c---c-eecccceEEEeeCChHHCCCeEEEEEEcCCCCE-
Confidence 356899999999999999999999998865432100 0 0 1111112345667999999 9999999998877
Q ss_pred eeeEEEEEEeeeee
Q psy8666 81 SRNATLQVAVVIFF 94 (124)
Q Consensus 81 ~~~~~l~v~~~~~~ 94 (124)
+..+.|.|..+|.+
T Consensus 240 ~~~~~l~V~~~P~i 253 (347)
T 2ifg_A 240 EVSVQVNVSFPASV 253 (347)
T ss_dssp CEEECCCCBEEEEE
T ss_pred EEEEEEEEcCCCee
Confidence 56777777777764
No 249
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=7.6e-10 Score=71.20 Aligned_cols=82 Identities=28% Similarity=0.485 Sum_probs=58.2
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+..|+.+.|.|.+.+.|.|.+.|+|++..+....... ..........+ .|..++..|.|.|.|.+.|..|.. ..
T Consensus 135 v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~-~~ 208 (334)
T 1ry7_B 135 VPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG-GIKLRHQQWSL----VMESVVPSDRGNYTCVVENKFGSI-RQ 208 (334)
T ss_dssp EETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTT-CCCCCTTTTEE----EECSCCGGGCCCEEEEEEETTEEE-EE
T ss_pred ecCCCcEEEEEEccCCCCCeEEEEECCEECccccccc-ceecccceEEE----EECCCCcccCEEEEEEEEeCCCCE-EE
Confidence 5579999999999999999999999998765321100 00001112223 356669999999999999998876 55
Q ss_pred eEEEEEEe
Q psy8666 83 NATLQVAV 90 (124)
Q Consensus 83 ~~~l~v~~ 90 (124)
.+.|.|..
T Consensus 209 ~~~l~V~~ 216 (334)
T 1ry7_B 209 TYTLDVLE 216 (334)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 77777765
No 250
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.91 E-value=9.1e-09 Score=66.15 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=48.5
Q ss_pred ecCCCEEEEEeeeccC-CC-eEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGKP-EP-TIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p-~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+|+.+.|.|.+.+.+ .+ .+.|+|+|..+..... .......++... ....|..+..+|.|.|.|.+.|..+..
T Consensus 233 ~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~---~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 233 RAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETA---STVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp SSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEEC---CSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred CCCCcEEEEEEEccccCCCcEEEEEECCeEccCccc---CceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 4799999999999854 44 7999999998764210 111222333322 223445557789999999999998876
Q ss_pred eeeeEEEE
Q psy8666 80 VSRNATLQ 87 (124)
Q Consensus 80 ~~~~~~l~ 87 (124)
.+..+.+.
T Consensus 310 ~s~~~~~~ 317 (327)
T 2wng_A 310 VSKSHDLK 317 (327)
T ss_dssp EEEEEECC
T ss_pred chhheEEE
Confidence 55444443
No 251
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.90 E-value=3e-08 Score=61.35 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=54.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|+. .. +... . .....+......... ....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 90 (242)
T 2znx_A 12 SVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTD-FTLSINSVETEDFGMYFCQQ 90 (242)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCE-EEEEECCCChHHCEEEEEeE
Confidence 5678999999999998888999999853 11 1100 0 000111111111111 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEeee
Q psy8666 73 RNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~~~ 92 (124)
.|..+...+....|.|..++
T Consensus 91 ~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 91 SNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp CSSSSCEECCCEEEEEC---
T ss_pred ecCCceEECCCEEEEEcCCC
Confidence 98755433345567766543
No 252
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.90 E-value=1.9e-08 Score=56.10 Aligned_cols=88 Identities=18% Similarity=0.293 Sum_probs=52.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||+. .. +... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 92 (119)
T 2e27_L 14 SASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGR-DYSFSISNLEPEDAATYYCLQ 92 (119)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETT-EEEEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCC-EEEEEECCCChHHCEEEEEEE
Confidence 5778999999999988788899999853 11 1100 0 00011221111111 223456888999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+...........|.|..
T Consensus 93 ~~~~~~~fg~GT~l~v~~ 110 (119)
T 2e27_L 93 YDNFTWTFGGGTKLEIKR 110 (119)
T ss_dssp CGGGCCEECCCEEEEEEC
T ss_pred ccCCceEECCCEEEEEeC
Confidence 875333333445555543
No 253
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.90 E-value=4.4e-09 Score=65.67 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=53.6
Q ss_pred EEecCCCEEEEEee---eccCCCeEEEEeC-CEEeec----------------cCCCCCceEEE-----ccCCcEEEEEE
Q psy8666 2 VVAKNEPVTLNCKA---EGKPEPTIEWYKD-GELVET----------------SKSDAKSQRVI-----LPTGSLFFLRV 56 (124)
Q Consensus 2 ~~~~G~~~~l~C~~---~~~p~p~v~w~k~-g~~~~~----------------~~~~~~~~~~~-----~~~~~~~~~~~ 56 (124)
.+..|+.+.|.|.+ .+.|.|.+.|+++ +..... ........... .....+ .
T Consensus 129 ~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L----~ 204 (268)
T 3mj6_A 129 RVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSI----K 204 (268)
T ss_dssp EEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCE----E
T ss_pred ccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEE----E
Confidence 46789999999999 5668999999983 321100 00000001111 112233 4
Q ss_pred EcCCCccCCeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 57 VHGKKEQDGGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 57 i~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|..++.+|.|.|.|.+.|..+.. ...+.|.|..
T Consensus 205 i~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~ 237 (268)
T 3mj6_A 205 LQTVKESDQGIYTCSIYVGKLES-RKTIVLHVVQ 237 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred ECcCChhhCeEEEEEEEcCCceE-EEEEEEEEEc
Confidence 56779999999999999988876 5677777743
No 254
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.89 E-value=5.4e-09 Score=62.40 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=50.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC--ccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV--GTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~--~~~ 79 (124)
.+.+|+.+.|.|.+.+ +.+.+.|+|+|..+... .........+ .|..++.+|.|.|.|.+.|.. ...
T Consensus 109 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~------~~~~~~~~~L----~I~~v~~~d~G~Y~C~a~n~~~~~s~ 177 (188)
T 1oll_A 109 EVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ------RGYGKVQAEF----PLGPVTTAHRGTYRCFGSYNNHAWSF 177 (188)
T ss_dssp EEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE------EEECSSEEEE----EEEECCGGGCEEEEEECEEETTEECC
T ss_pred ccccCCEEEEEEEcCC-CCCEEEEEECCcccccc------ccCCCceeEE----EECCCCcCCCcEEEEEEEcCCCcCCC
Confidence 3578999999999865 45789999998755420 0011111223 345559999999999999864 233
Q ss_pred eeeeEEEEEE
Q psy8666 80 VSRNATLQVA 89 (124)
Q Consensus 80 ~~~~~~l~v~ 89 (124)
.+..+.|.|.
T Consensus 178 ~S~~~~l~V~ 187 (188)
T 1oll_A 178 PSEPVKLLVT 187 (188)
T ss_dssp CCCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 4566666653
No 255
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.89 E-value=1.4e-08 Score=55.42 Aligned_cols=74 Identities=26% Similarity=0.449 Sum_probs=46.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||+. .. +... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 90 (107)
T 1i8k_A 12 SVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGT-DFVFTIENTLSEDVGDYYCLQ 90 (107)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETT-EEEEEESSCCGGGCEEEEEEE
T ss_pred EecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCC-EEEEEECCCCHHHCEEEEEEE
Confidence 4678999999999988778889999853 21 1100 0 00011221211111 223457888999999999998
Q ss_pred EeCC
Q psy8666 73 RNSV 76 (124)
Q Consensus 73 ~~~~ 76 (124)
.+..
T Consensus 91 ~~~~ 94 (107)
T 1i8k_A 91 SFNV 94 (107)
T ss_dssp CSSS
T ss_pred eeCC
Confidence 8753
No 256
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.89 E-value=1.9e-08 Score=61.88 Aligned_cols=89 Identities=15% Similarity=0.216 Sum_probs=55.3
Q ss_pred EEecCCCEEEEEeeeccC----CCeEEEEeCC--EEe---eccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP----EPTIEWYKDG--ELV---ETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p----~p~v~w~k~g--~~~---~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|+. ..+ .... .....+......... ....|.+++.+|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y 90 (240)
T 1moe_A 12 AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTD-FTLIIDPVEADDVATY 90 (240)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEE
T ss_pred EecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCe-EEEEEcCCChhhCEEE
Confidence 467899999999998887 7889999852 211 1000 000111111111111 2345688899999999
Q ss_pred EEEeEeCCccceeeeEEEEEEee
Q psy8666 69 WCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 69 ~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
.|.+.|..+...+....|.|...
T Consensus 91 ~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 91 YCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp EEEECSSSSCCBCCCEEEEECCC
T ss_pred EEEEccCCceeecCCEEEEEecC
Confidence 99999986553344566777653
No 257
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.89 E-value=2.7e-08 Score=68.49 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=60.7
Q ss_pred EEecCCCEEEEEeeeccCCC---eEEEEeCCEEe-----eccC-C---CCCceEEEccC-CcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP---TIEWYKDGELV-----ETSK-S---DAKSQRVILPT-GSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p---~v~w~k~g~~~-----~~~~-~---~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~y 68 (124)
.+..|+.+.|.|.+.+.|.+ .+.|+|++..+ .... . ....+...... ........|.+++..|.|.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y 90 (585)
T 2ocw_A 11 NSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRY 90 (585)
T ss_pred EEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEE
Confidence 57789999999999887654 78999987532 1100 0 00011111110 11112334677799999999
Q ss_pred EEEeEeCCccceeeeEEEEEEeeeeeee
Q psy8666 69 WCLARNSVGTAVSRNATLQVAVVIFFIS 96 (124)
Q Consensus 69 ~C~~~~~~~~~~~~~~~l~v~~~~~~~~ 96 (124)
.|.+.|..+.. +..+.|.|..+|.+..
T Consensus 91 ~C~~~n~~~~~-~~~~~l~V~~~p~~~~ 117 (585)
T 2ocw_A 91 KCGLGINSRGL-SFDVSLEVSQGPGLLN 117 (585)
T ss_pred EEEcccCCCCc-eEEEEEEEecCccccC
Confidence 99999987766 5678888888776543
No 258
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.89 E-value=1.9e-08 Score=62.70 Aligned_cols=90 Identities=16% Similarity=0.265 Sum_probs=56.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccC-----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSK-----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|+ +..+. ... .....+......... ....|.+++.+|.|.|.|.+
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 149 SASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSD-YSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTE-EEEEECSCCGGGCSEEEEEE
T ss_pred EEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCE-EEEEECCCChhHCEEEEEEE
Confidence 466899999999999988889999984 22211 000 000011111111221 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEeee
Q psy8666 73 RNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~~~ 92 (124)
.+.........+.|.|...+
T Consensus 228 ~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 228 YASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp CSSSSCEECCCEEEEEC---
T ss_pred eeCCCcEECCCEEEEEECCC
Confidence 98766555667888887654
No 259
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.89 E-value=1.2e-09 Score=65.23 Aligned_cols=68 Identities=22% Similarity=0.412 Sum_probs=49.0
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcC-CCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHG-KKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
...|+.+.|.|.+.+ +. .+.|+|+|..+... .+..+ .|.. ++..|.|.|.|.+.|..|.. +
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-----------~~~~L----~I~~~~~~~D~G~Y~C~a~n~~g~~-~ 72 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-----------HDKHL----VLQDFSEVEDSGYYVCYTPASNKNT-Y 72 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSC-----------CCSEE----EEESCCTTTSCEEEEEECSSCCCCC-C
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-----------CCCEE----EECCCCccccCEEEEEEEEeCCCcE-E
Confidence 357999999999887 43 49999999887631 12233 3455 68999999999999988774 3
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.+.|
T Consensus 73 ~~~~~~v 79 (186)
T 1jbj_A 73 LYLKARV 79 (186)
T ss_dssp EEECCCC
T ss_pred EEEEEEE
Confidence 3444433
No 260
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.88 E-value=2.5e-08 Score=61.76 Aligned_cols=88 Identities=18% Similarity=0.342 Sum_probs=54.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--E---Eeecc----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--E---LVETS----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~---~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|+. . .+... ......+......... ....|.+++.+|.|.|.|.+
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 93 (250)
T 3esu_F 15 SASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTD-YSLTISNLEQEDIGTYFCQQ 93 (250)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCE-EEEEEccCChhhCEEEEEEE
Confidence 4678999999999999999999999843 1 11100 0000111111111111 23456888999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.|..+........|.|..
T Consensus 94 ~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 94 GNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CSSSSCEECCCEEEEEC-
T ss_pred eeCCCceECCCEEEEEEC
Confidence 987665434455666654
No 261
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.88 E-value=3.1e-08 Score=55.28 Aligned_cols=88 Identities=18% Similarity=0.306 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|.+.+.+.+.+.|||+. .. +... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 90 (120)
T 1mqk_L 12 SASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGT-QFSLKINSLLPEDFGSYYCQH 90 (120)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEEEEEEE
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCC-EEEEEECCCCHHHCEEEEEEE
Confidence 5678999999999988778899999843 21 1100 0 00011111111111 223457888999999999999
Q ss_pred EeCC-ccceeeeEEEEEEe
Q psy8666 73 RNSV-GTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~-~~~~~~~~~l~v~~ 90 (124)
.+.. .........|.|..
T Consensus 91 ~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 91 HYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp CSSSSSCCBCCCEEEEEC-
T ss_pred EeCCCceEECCCeEEEEec
Confidence 8854 22334566777654
No 262
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.88 E-value=2.5e-09 Score=68.15 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=54.5
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.+.+|+.+.|.|.+.+. |.+.+.|+|++..+.... ..... .+. ....|..++..|.|.|.|.+.|..+..
T Consensus 17 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~-----~~~~~-~~~--~~L~i~~~~~~d~G~Y~C~~~n~~g~~- 87 (317)
T 2y25_A 17 EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-----KHDFK-DGI--CTLLITEFSKKDAGIYEVILKDDRGKD- 87 (317)
T ss_dssp EEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSC-----C------CC--EEEEETTCCSTTCSCEEEEEESSSCEE-
T ss_pred EECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCC-----cEEEE-CCe--EEEEEccCCcccCeEEEEEEECCCCcE-
Confidence 46789999999999887 778999999998876321 11111 111 223467779999999999999988765
Q ss_pred eeeEEEEE
Q psy8666 81 SRNATLQV 88 (124)
Q Consensus 81 ~~~~~l~v 88 (124)
...+.|.+
T Consensus 88 ~~~~~l~v 95 (317)
T 2y25_A 88 KSRLKLVD 95 (317)
T ss_dssp EEEECCST
T ss_pred EEEEEEEE
Confidence 33444433
No 263
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.88 E-value=4.8e-08 Score=62.66 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=58.2
Q ss_pred EecC---CCEEEEEe-eeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKN---EPVTLNCK-AEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G---~~~~l~C~-~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..| +.+.|.|. ..+.|.|.+.|++++..... ........+.+. ....+..++..|.|.|.|.+.|..
T Consensus 144 ~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 217 (331)
T 3u83_A 144 AKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAE------YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHM 217 (331)
T ss_dssp ECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEE------EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETT
T ss_pred ecCCCccceEEEEEEecCCcCCceEEEEcCCCCccc------cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCC
Confidence 4456 66999998 78889999999996332221 011122223322 223455668899999999999998
Q ss_pred ccceeeeEEEEEEeeeeee
Q psy8666 77 GTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~~ 95 (124)
+.. +..+.|.|..+|.+.
T Consensus 218 ~~~-~~~~~l~V~~~P~~~ 235 (331)
T 3u83_A 218 DRF-KESLTLNVQYEPEVT 235 (331)
T ss_dssp EEE-EEEEECCEEEEEEEE
T ss_pred Ccc-eeeEEEEEecCCeEE
Confidence 776 667888888777655
No 264
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.88 E-value=3.6e-08 Score=59.82 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=55.2
Q ss_pred EEecCCCEEEEEeeeccCC-----CeEEEEeCCEEeeccCCC----------CCceEEEccC--CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-----PTIEWYKDGELVETSKSD----------AKSQRVILPT--GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-----p~v~w~k~g~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.|. +.+.|+|++..+...... ...+...... ........|.+++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 91 (222)
T 3sbw_C 12 VVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQD 91 (222)
T ss_dssp EEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGG
T ss_pred EEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccccc
Confidence 4678999999999876663 479999986433211000 0011111111 0011234568889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEEeeee
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVAVVIF 93 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~~~~~ 93 (124)
.|.|.|.+.+ .+.. ...+.|.|..++.
T Consensus 92 ~G~Y~C~~~~-~~~~-~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 92 AGVYRCMISY-GGAD-YKRITVKVNAPYN 118 (222)
T ss_dssp CEEEEEEEES-SSEE-EEEEEEEEEBCCC
T ss_pred CeEEEEEEEe-CCCc-eeEEEEEEECCCC
Confidence 9999999998 4444 5567787776553
No 265
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.87 E-value=1.8e-08 Score=70.20 Aligned_cols=80 Identities=20% Similarity=0.343 Sum_probs=58.3
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+.+.|.|.+.+ |.+.+.|+++|..+... ...... ....+. |..++..|.|.|.|.+.|..+...+
T Consensus 123 v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~-----~~~~~~~~~~~L~----i~~~~~~d~G~Y~C~a~n~~~~~~s 192 (642)
T 1e07_A 123 VEDKDAVAFTCEPET-QDATYLWWVNNQSLPVS-----PRLQLSNGNRTLT----LFNVTRNDTASYKCETQNPVSARRS 192 (642)
T ss_pred EecCCcEEEEEECCC-CCeeEEEEECCeECCCC-----CceEEcCCCCEEE----EeCCCcccCeeEEEEEecCCCCccc
Confidence 457889999999988 88999999999877532 122222 223333 4555899999999999998877556
Q ss_pred eeEEEEEEeee
Q psy8666 82 RNATLQVAVVI 92 (124)
Q Consensus 82 ~~~~l~v~~~~ 92 (124)
..+.|.|...|
T Consensus 193 ~~~~l~V~~~p 203 (642)
T 1e07_A 193 DSVILNVLYGP 203 (642)
T ss_pred ceEEEEEEeCC
Confidence 67788887554
No 266
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.87 E-value=2.8e-08 Score=62.11 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=55.8
Q ss_pred EEecCCCEEEEEeeec-cCCC--eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeE--EEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEP--TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV--YWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p--~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~--y~C~~~~~~ 76 (124)
.+.+|+.+.|.|.+.+ .|.| .+.|+|++..+.. . .......+.+... ..++..|.|. |.|.+.|..
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~-------~-~~~~~~~~~~~~~-~~~~~~d~g~g~Y~C~a~n~~ 84 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-------T-VTYGNDSFSAKAS-VSVTAEDEGTQRLTCAVILGN 84 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC-------E-EEECSSEEEEEEE-EEECGGGCEEEEEEEEEEETT
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc-------e-EeeCCCeEEEEee-cccccccCCcceEEEEEecCC
Confidence 3678999999999988 7777 8999999987652 1 1122223322222 2336688885 999999998
Q ss_pred ccceeeeEEEEEEee
Q psy8666 77 GTAVSRNATLQVAVV 91 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~ 91 (124)
+.. ...+.|.|...
T Consensus 85 ~~~-~~~~~l~V~~~ 98 (265)
T 2oz4_A 85 QSQ-ETLQTVTIYSF 98 (265)
T ss_dssp EEE-EEEEEEEEECC
T ss_pred CCc-EEEEEEEEeCC
Confidence 876 56778888653
No 267
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.86 E-value=1.7e-07 Score=58.27 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=53.2
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeecc------------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETS------------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|. +..+... ......+..... .........|.+++.+|
T Consensus 12 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 91 (253)
T 3uzq_A 12 LVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGD 91 (253)
T ss_dssp EECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCccc
Confidence 467899999999988744 778999982 2211100 000001111111 11112234568889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+........|.|..
T Consensus 92 sG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CEEEEEEEeeCCccEECCCcEEEEec
Confidence 99999999986655434456666653
No 268
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.86 E-value=8.4e-09 Score=65.16 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=55.0
Q ss_pred EEecCCCEEEEEeeeccCC-CeEEEE-eCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCe-EEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-PTIEWY-KDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGG-VYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-p~v~w~-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g-~y~C~~~~~~~~ 78 (124)
.+.+|+.+.|.|.+.+ |. |.+.|+ ++|..+... ..........+ .|..++..|.| .|.|.+.|..+.
T Consensus 102 ~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~-----~~~~~~~~~~L----~i~~v~~~d~G~~Y~C~a~n~~~~ 171 (290)
T 2o26_X 102 FGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD-----LTFVPNPKAGI----TIKNVKRAYHRLCVRCAAQRDGTW 171 (290)
T ss_dssp EEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT-----CEEEEETTTEE----EEESCCGGGTTCEEEEEEEETTEE
T ss_pred EEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC-----CceeeCCCCCE----EEecccHHHCCCEEEEEEEECCce
Confidence 3567999999999985 77 899995 677665421 22223333444 34566999999 999999998666
Q ss_pred ceeeeEEEEEE
Q psy8666 79 AVSRNATLQVA 89 (124)
Q Consensus 79 ~~~~~~~l~v~ 89 (124)
..+..+.|.|.
T Consensus 172 ~~s~~~~l~V~ 182 (290)
T 2o26_X 172 LHSDKFTLKVR 182 (290)
T ss_dssp EECCCEEEEEE
T ss_pred EEeEEEEEEEE
Confidence 54556777776
No 269
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.85 E-value=1e-08 Score=61.97 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEeeeccCCCe---EEEEeCCEEeeccC-----------CCCCceEEEc----------cCCcEEEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT---IEWYKDGELVETSK-----------SDAKSQRVIL----------PTGSLFFLRVV 57 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~---v~w~k~g~~~~~~~-----------~~~~~~~~~~----------~~~~~~~~~~i 57 (124)
.+..|+.+.|.|.+.+.+.+. +.|+|++....... .......... ....+ .|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL----~I 87 (225)
T 4fmk_A 12 RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATL----AF 87 (225)
T ss_dssp EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCE----EE
T ss_pred EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEE----EE
Confidence 467899999999998877664 78999764332100 0000000000 11223 45
Q ss_pred cCCCccCCeEEEEEeEeCCccceeeeEEEEEEeeee
Q psy8666 58 HGKKEQDGGVYWCLARNSVGTAVSRNATLQVAVVIF 93 (124)
Q Consensus 58 ~~~~~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~~~ 93 (124)
.+++.+|.|.|.|.+.+..+........+.+..++.
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~ 123 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPE 123 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCc
Confidence 777999999999999997766544445555544443
No 270
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.85 E-value=5e-08 Score=58.61 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=51.7
Q ss_pred CEEecCCCEEEEEeeeccCCC---eEEEEeCCEEeeccC----CCC---------CceEEEccC--CcEEEEEEEcCCCc
Q psy8666 1 MVVAKNEPVTLNCKAEGKPEP---TIEWYKDGELVETSK----SDA---------KSQRVILPT--GSLFFLRVVHGKKE 62 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~p---~v~w~k~g~~~~~~~----~~~---------~~~~~~~~~--~~~~~~~~i~~~~~ 62 (124)
|.+..|+.+.|.|.+.+.|.+ .+.|+|++....... ... ..+...... ........|.+++.
T Consensus 9 vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 88 (218)
T 4frw_A 9 VTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQ 88 (218)
T ss_dssp EEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCG
T ss_pred EEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccH
Confidence 357889999999999887765 389999764322100 000 000000000 00001124677799
Q ss_pred cCCeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 63 QDGGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 63 ~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
+|.|.|.|.+.+..+........+.+..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~ 116 (218)
T 4frw_A 89 ADEGEYECRVSTFPAGSFQARLRLRVLV 116 (218)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred HHCCceeEEEEeccCceeeeEEEEEEee
Confidence 9999999999887665434344444443
No 271
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.85 E-value=6.7e-10 Score=57.99 Aligned_cols=56 Identities=23% Similarity=0.502 Sum_probs=41.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCC-CccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGK-KEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~d~g~y~C~~~~ 74 (124)
.+..|+++.|.|.+.+.|. ++|+|+|..+... ..+.+ .|.++ +.+|.|.|.|.+..
T Consensus 10 v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~-----------~~~~L----~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 10 VSISGTSVELTCPLDSDEN--LKWEKNGQELPQK-----------HDKHL----VLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp EEEETTEEEEECSSCCCSS--CEEEETTEECTTC-----------CSSCC----BCCSCCTTTTCSCEEEECSS
T ss_pred EEEcCCeEEEEEECCCCCc--EEEEECCEECcCC-----------CCCEE----EECccCccCcCEEEEEEEcc
Confidence 3567999999999998873 9999999877521 22233 24553 67999999999865
No 272
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.85 E-value=9.9e-08 Score=59.37 Aligned_cols=81 Identities=17% Similarity=0.161 Sum_probs=52.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc-ce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT-AV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~-~~ 80 (124)
.+..|++++|.|.+.+ +.+.+.|+|++..+....... ...... ....|..++..|.|.|.|.+.+..+. ..
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~------~~~~~~-~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~ 88 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP------PERINK-VKFYIPDMNSRMAGQYSCIYRVGELWSEP 88 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS------CTTCCE-EEEEECSCCGGGCEEEEEEEEETTEECCC
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccc------cCCcce-eEEEecCCCcccCeEEEEEEecCCccccC
Confidence 3678999999999864 456789999998764210000 001111 12346777999999999999886442 23
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 89 S~~~~L~V~~ 98 (242)
T 1p6f_A 89 SNLLDLVVTE 98 (242)
T ss_dssp CCCEEEEEEC
T ss_pred CcceEEEeec
Confidence 5567777764
No 273
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.85 E-value=2.4e-08 Score=62.97 Aligned_cols=89 Identities=17% Similarity=0.306 Sum_probs=53.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCE-----Eeecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGE-----LVETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~-----~~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++. .+... . .....+......... ....|.+++.+|.|.|.|.+
T Consensus 23 ~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~Y~C~~ 101 (276)
T 3auv_A 23 SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTD-FTLTISSLQPEDFATYYCQQ 101 (276)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCe-EEEEEccCChhhCEEEEEEE
Confidence 46789999999999988889999998542 11100 0 000111111111211 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEee
Q psy8666 73 RNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~~ 91 (124)
.|..+...+....|.|...
T Consensus 102 ~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 102 HYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp CSSSSCCCCCCEEEEC---
T ss_pred ecCCcccccCCEEEEEecC
Confidence 9976543334456666543
No 274
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.85 E-value=3.6e-08 Score=59.59 Aligned_cols=86 Identities=16% Similarity=0.293 Sum_probs=52.5
Q ss_pred EEecCCCEEEEEeeeccC---CCeEEEEeCC--EEeecc-------CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP---EPTIEWYKDG--ELVETS-------KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p---~p~v~w~k~g--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+..|+.+.|.|.+.+.| .+.+.|+|++ ..+... ......+......... ....|.+++.+|.|.|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~ 89 (212)
T 1q0x_L 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDK-AALTITGAQTEDEAIYF 89 (212)
T ss_dssp EECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEE
T ss_pred eecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCE-EEEEECCCCccCCEEEE
Confidence 467899999999998877 4789999852 222100 0000111111111111 23456788999999999
Q ss_pred EEeEeCCccceeeeEEEEE
Q psy8666 70 CLARNSVGTAVSRNATLQV 88 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v 88 (124)
|.+.+..+........|.|
T Consensus 90 C~~~~~~~~~~~~~~~l~V 108 (212)
T 1q0x_L 90 CALWSNNKLVFGGGTKLTV 108 (212)
T ss_dssp EEEECSSCEEECCCEEEEE
T ss_pred EEEecCchhhcCCCeEEEE
Confidence 9999976643334556666
No 275
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.84 E-value=3.2e-08 Score=61.47 Aligned_cols=88 Identities=16% Similarity=0.346 Sum_probs=53.0
Q ss_pred EEecCCCEEEEEeeeccC-----CCeEEEEeC--CEEeec-------cCCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-----EPTIEWYKD--GELVET-------SKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-----~p~v~w~k~--g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.+.+.| .+.+.|+|+ +..+.. .......+......... ....|.+++..|.|.
T Consensus 49 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~ 127 (254)
T 2c1o_A 49 SVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTD-FTLKISRVEAEDLGI 127 (254)
T ss_dssp EECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCSE
T ss_pred EecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCE-EEEEECcCCcccCEE
Confidence 467899999999998877 488999974 322110 00000111111111211 234567889999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEe
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.|.+.|..+........+.|..
T Consensus 128 Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 128 YYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp EEEEECSSSSCEEBCCEEEEECC
T ss_pred EEEEEEcCcceEecCCEEEEECC
Confidence 99999987654333344566643
No 276
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.84 E-value=4.2e-09 Score=62.68 Aligned_cols=64 Identities=22% Similarity=0.322 Sum_probs=43.9
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
+..|+.+.|.|.+.+. .+.+.|+|+|..+... .. .......+.+..+ +.+|.|.|.|.+.|..+
T Consensus 105 v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~-----~~-~~~~~~~L~i~~v----~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 105 VSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYK-----NP-ERWYRASFPIITV----TAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SCCTTCEEEEEECSSC-CCEEEEEECCCCTTSC-----CC-CEEEEESSSEEEE----TTCCSEEEEEEEECTTS
T ss_pred ecCCCcEEEEEEcCCC-CcEEEEEECCCcCcce-----ec-CCCceEEEEEccC----CccCCeEEEEEEEeCCC
Confidence 4579999999998664 4689999998765421 00 1112233333444 89999999999999753
No 277
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.84 E-value=6.4e-08 Score=59.79 Aligned_cols=87 Identities=20% Similarity=0.289 Sum_probs=52.4
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC----------------CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD----------------GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|.+.+.+.+.+.|||. +...... ....+..............|.+++.+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 12 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQG--VEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTT--CCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCc--ccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 467899999999999889999999982 1111100 0001111111111122345688899999
Q ss_pred eEEEEEeEeCCc---cceeeeEEEEEEe
Q psy8666 66 GVYWCLARNSVG---TAVSRNATLQVAV 90 (124)
Q Consensus 66 g~y~C~~~~~~~---~~~~~~~~l~v~~ 90 (124)
|.|.|.+.+..+ ........|.|..
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEec
Confidence 999999987543 1123345666653
No 278
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.84 E-value=2e-09 Score=69.46 Aligned_cols=84 Identities=21% Similarity=0.354 Sum_probs=60.2
Q ss_pred EEecCCCEEEEEeee-------ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAE-------GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-------~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|.+. +.|.+.+.|+|++..+..... .... .....+.+ .|..++..|.|.|.|.+.|
T Consensus 29 ~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~-~~~~-~~~~~~~L----~i~~v~~~D~G~Y~C~~~n 102 (339)
T 3o4o_C 29 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGE-EETR-MWAQDGAL----WLLPALQEDSGTYVCTTRN 102 (339)
T ss_dssp EEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCC-SSSC-EEEETTEE----EESSBCTTCCEEEECCEEE
T ss_pred EEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCcc-cccc-EEeeCCeE----EECCCCcccCEEEEEEEEC
Confidence 467899999999997 888999999999876432111 0112 22334444 3566699999999999999
Q ss_pred CCccceeeeEEEEEEeee
Q psy8666 75 SVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 75 ~~~~~~~~~~~l~v~~~~ 92 (124)
..+.. ...+.|.|...+
T Consensus 103 ~~g~~-~~~~~l~V~~~~ 119 (339)
T 3o4o_C 103 ASYCD-KMSIELRVFENT 119 (339)
T ss_dssp TTEEE-EEEEEEEEECSC
T ss_pred CcceE-EEEEEEEEEcCC
Confidence 88765 567777776654
No 279
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.84 E-value=4.9e-09 Score=68.35 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=53.7
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
+.+|+.+.|.|.+.+.|.|.+.|++++..+. .....+ .|..++..|.|.|.|.+.|..+.. ..
T Consensus 108 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~------------~~~~~L----~i~~v~~~d~G~Y~C~a~~~~~~~-~~ 170 (363)
T 1wio_A 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGKNI------------QGGKTL----SVSQLELQDSGTWTCTVLQNQKKV-EF 170 (363)
T ss_dssp EESBSCEEEEEECCTTCCCCEEEECSSSCEE------------EESSEE----EECSBCGGGCEECEEEEEETTEEE-EE
T ss_pred EecCCCEEEEEEcCCCCCCeEEEEcCCCccc------------ccceEE----EEeeCChhcCCEEEEEEecCCCeE-EE
Confidence 5689999999999889999999999875432 122333 345668999999999999976554 34
Q ss_pred eEEEEEEeee
Q psy8666 83 NATLQVAVVI 92 (124)
Q Consensus 83 ~~~l~v~~~~ 92 (124)
.+.+.|..+|
T Consensus 171 ~~~l~v~~~p 180 (363)
T 1wio_A 171 KIDIVVLAFQ 180 (363)
T ss_dssp CCEECEECCS
T ss_pred EEEEEEecCC
Confidence 5566665444
No 280
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.84 E-value=2.1e-08 Score=62.38 Aligned_cols=92 Identities=15% Similarity=0.295 Sum_probs=57.5
Q ss_pred EEecCCCEEEEEeeeccCCC----eEEEEeC--CEEee--ccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP----TIEWYKD--GELVE--TSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p----~v~w~k~--g~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+.+|+++.|.|.+.+.+.+ .+.|+|+ +.... .... ....+........ .....|.+++.+|.|.|
T Consensus 144 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG~Y 222 (253)
T 3uzq_A 144 AVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRT-DFTLTINPVEADDVATY 222 (253)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCC-EEEEEECCCCHHHCEEE
Confidence 46689999999999888776 8999984 22211 0000 0001111111111 22345688899999999
Q ss_pred EEEeEeCCccceeeeEEEEEEeeeee
Q psy8666 69 WCLARNSVGTAVSRNATLQVAVVIFF 94 (124)
Q Consensus 69 ~C~~~~~~~~~~~~~~~l~v~~~~~~ 94 (124)
.|.+.|..+......+.|.|...+.+
T Consensus 223 ~C~~~n~~~~~fg~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 223 FCQRSNEVPWTFGGGTKLEIKRPLEH 248 (253)
T ss_dssp EEEECSSSSCCBCCCEEEEECCC---
T ss_pred EEEEccCCCcEECCCEEEEEcCCCCC
Confidence 99999977666667788888765543
No 281
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.84 E-value=5e-08 Score=61.98 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=50.1
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+. +.|.|.+.|++++..+.... ............ ....|..++..|.|.|.|.+.+..
T Consensus 118 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~---~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~ 189 (312)
T 2y23_A 118 EILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP---KYKMHIDRNTGI-IEMFMEKLQDEDEGTYTFQLQDGK 189 (312)
T ss_dssp EECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSS---SCEEEEETTTTE-EEEEESCCCGGGCEEEEEEEESSS
T ss_pred EEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCC---cEEEEEccCCCE-EEEEEccCCcccCEeEEEEEEeCC
Confidence 356799999999998 88999999999999876431 111111111222 334567889999999999997644
No 282
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.84 E-value=4.1e-08 Score=59.30 Aligned_cols=85 Identities=16% Similarity=0.291 Sum_probs=52.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+. |.+.+.|+|+ +.... .... ....+......... ....|.+++.+|.|.|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 11 SGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNT-ASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp EECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTE-EEEEEESCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCE-EEEEECCCChhHCEEEEEEE
Confidence 567899999999988 8889999984 22211 0000 00011111111111 22345777999999999999
Q ss_pred EeCCc-cceeeeEEEEEE
Q psy8666 73 RNSVG-TAVSRNATLQVA 89 (124)
Q Consensus 73 ~~~~~-~~~~~~~~l~v~ 89 (124)
.+..+ ........|.|.
T Consensus 88 ~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EETTTEEEECCCEEEEEC
T ss_pred ecCCCceeECCCceEEEe
Confidence 99876 233556677776
No 283
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.84 E-value=3.5e-09 Score=63.58 Aligned_cols=89 Identities=20% Similarity=0.310 Sum_probs=58.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccC-------CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSK-------SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... ......... ....+ .|.+++..|.|.|.|.+.+
T Consensus 15 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~L----~i~~~~~~d~G~Y~C~~~~ 89 (209)
T 1nbq_A 15 RIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF-LPTGI----TFKSVTREDTGTYTCMVSE 89 (209)
T ss_dssp CEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE-ETTEE----ECSCCCTTSCSEEEEEEEE
T ss_pred EEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe-eccEE----EEeeCCHHHCcEEEEEEec
Confidence 46789999999999988999999999765421100 000011111 12222 4567799999999999999
Q ss_pred CCccc-eeeeEEEEEEeeeeee
Q psy8666 75 SVGTA-VSRNATLQVAVVIFFI 95 (124)
Q Consensus 75 ~~~~~-~~~~~~l~v~~~~~~~ 95 (124)
..+.. .+..+.|.|..+|.+.
T Consensus 90 ~~g~~~~~~~~~l~V~~~p~~~ 111 (209)
T 1nbq_A 90 EGGNSYGEVKVKLIVLVPPSKP 111 (209)
T ss_dssp TTSSCEECCEEECCEEBCCCCC
T ss_pred CCCCccceEEEEEEEecCCcCC
Confidence 86522 2456677777766543
No 284
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.83 E-value=6.7e-08 Score=53.29 Aligned_cols=72 Identities=25% Similarity=0.344 Sum_probs=44.9
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEeeccCCCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVETSKSDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+++.|.|...+.+ .+.+.|||+. ...... .....+.... ..........|.+++.+|.|.|.|.+.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~-~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 11 TKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEES-ISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp EECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEE-CCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred EEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEe-EEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 567899999999987655 5679999853 221100 0011122111 1122233455788899999999999887
No 285
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.83 E-value=1.2e-07 Score=60.63 Aligned_cols=82 Identities=17% Similarity=0.061 Sum_probs=53.5
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc---
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA--- 79 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~--- 79 (124)
+.+|+.+.|.|.+. .+.+.+.|+|++..+... ................|..++.+|.|.|.|.+.|..+..
T Consensus 130 v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~-----~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 203 (316)
T 3vh8_G 130 VKSGERVILQCWSD-IMFEHFFLHKEGISKDPS-----RLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLS 203 (316)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEETTCCSCCE-----EEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCC
T ss_pred cCCCCeEEEEEcCC-CCCcEEEEEECCCccccc-----eeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCcccc
Confidence 56899999999984 466789999998765321 000011111122233467789999999999999987642
Q ss_pred -eeeeEEEEEEe
Q psy8666 80 -VSRNATLQVAV 90 (124)
Q Consensus 80 -~~~~~~l~v~~ 90 (124)
.+..+.|.|..
T Consensus 204 ~~s~~~~l~V~~ 215 (316)
T 3vh8_G 204 APSDPLDIVVTG 215 (316)
T ss_dssp CCCCCEEEEEEC
T ss_pred CCCCCEEEEecC
Confidence 24456666653
No 286
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.83 E-value=3.5e-08 Score=61.66 Aligned_cols=88 Identities=17% Similarity=0.311 Sum_probs=55.3
Q ss_pred EEecCCCEEEEEeeeccCCC-----eEEEEe--CCEEeeccCC-------CCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-----TIEWYK--DGELVETSKS-------DAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-----~v~w~k--~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.+.+.|.+ .+.|+| ++..+..... ....+........ .....|..++.+|.|.
T Consensus 132 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG~ 210 (256)
T 1nqb_A 132 PVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGT-DFTLKISRVEAEDLGV 210 (256)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEE
T ss_pred EEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCC-EEEEEECCCChHHCEE
Confidence 46789999999999888765 899999 5553321000 0001111111111 1234567889999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEe
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.|.+.+......+....|.|..
T Consensus 211 Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 211 YYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEccCCceEECCCEEEEEEC
Confidence 99999986554445566777754
No 287
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.83 E-value=6.7e-09 Score=63.39 Aligned_cols=87 Identities=23% Similarity=0.396 Sum_probs=57.0
Q ss_pred EEecCCCEEEEEeeeccCC-CeEEEEeCCEE-----eeccC-CCC--CceEE----------EccCCcEEEEEEEcCCCc
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-PTIEWYKDGEL-----VETSK-SDA--KSQRV----------ILPTGSLFFLRVVHGKKE 62 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-p~v~w~k~g~~-----~~~~~-~~~--~~~~~----------~~~~~~~~~~~~i~~~~~ 62 (124)
.+..|+.+.|.|.+.+.+. +.+.|++++.. +.... ... ..... ....+.+ .|..++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L----~i~~v~~ 86 (231)
T 2pet_A 11 EVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRL----VLAEAQV 86 (231)
T ss_dssp EEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCE----EESSCCG
T ss_pred EEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceE----EEcccCc
Confidence 4678999999999998885 88999975432 11000 000 01111 2233333 4577799
Q ss_pred cCCeEEEEEeEeCC-ccceeeeEEEEEEeeee
Q psy8666 63 QDGGVYWCLARNSV-GTAVSRNATLQVAVVIF 93 (124)
Q Consensus 63 ~d~g~y~C~~~~~~-~~~~~~~~~l~v~~~~~ 93 (124)
.|.|.|.|.+.+.. +.. +..+.|.|..+|.
T Consensus 87 ~D~G~Y~C~~~~~~~~~~-~~~~~l~V~~~p~ 117 (231)
T 2pet_A 87 GDERDYVCVVRAGAAGTA-EATARLNVFAKPE 117 (231)
T ss_dssp GGCEEEEEEEECGGGCEE-EEEEEEEEEBCCC
T ss_pred ccCceEEEEEEecCCCce-EEEEEEEEEecCC
Confidence 99999999999987 444 6677888877653
No 288
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.83 E-value=1.5e-08 Score=59.81 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=55.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCC-------CCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSD-------AKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLAR 73 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~ 73 (124)
.+..|+.+.|.|...+ |.+.+.|+|++..+...... ...+... ..++++ .|.+++..|.|.|.|.+.
T Consensus 6 ~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL----~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSL----TIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCE----EECSCCGGGCEEEEEECT
T ss_pred EEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeE----EECCCChhhCceEEEEEe
Confidence 4678999999998844 88899999988754321000 0011112 133444 356679999999999999
Q ss_pred eCCccceeeeEEEEEEee
Q psy8666 74 NSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 74 ~~~~~~~~~~~~l~v~~~ 91 (124)
+..+ ...+.|.|..+
T Consensus 81 n~~~---~~~~~L~V~~~ 95 (171)
T 1ccz_A 81 NITD---TMKFFLYVLEM 95 (171)
T ss_dssp TCCS---CEEEEEEEECC
T ss_pred CCCC---cEEEEEEEECc
Confidence 8776 34677777665
No 289
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.82 E-value=1.3e-08 Score=60.77 Aligned_cols=85 Identities=18% Similarity=0.255 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEeee--ccCCCeEEEEe--CCEEeeccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAE--GKPEPTIEWYK--DGELVETSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~--~~p~p~v~w~k--~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
....|+.+.|.|... +.+.+.+.|+| ++..+..... ....+.....++++. |.+++.+|.|.|.|.+
T Consensus 10 ~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~----I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 10 WGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLK----IKHLKTDDQDIYKVSI 85 (182)
T ss_dssp EEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEE----ECSCCGGGCEEEEEEE
T ss_pred EEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEE----ECCCChhhCEEEEEEE
Confidence 456899999999542 24567899999 8876531100 011333445666664 5666999999999999
Q ss_pred EeCCccce-eeeEEEEEEe
Q psy8666 73 RNSVGTAV-SRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~-~~~~~l~v~~ 90 (124)
.|..|... ...+.|.|..
T Consensus 86 ~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EETTSCEEEEEEEEEEEEC
T ss_pred EeCCCceeEEEEEEEEEcC
Confidence 99887652 2455677654
No 290
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.82 E-value=2.1e-08 Score=63.13 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=54.1
Q ss_pred EEecCCCEEEEEeeeccCCCe-EEEEe-CCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPT-IEWYK-DGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~-v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.+..|+.+.|.|.+.+.+.+. +.|++ ++..+... ........+.+ .|..++..|.|.|.|.+.+.....
T Consensus 100 ~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~-----~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~~~~~~~ 170 (289)
T 3ejj_X 100 TVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRK-----TVYFFSPWRGF----IIRKAKVLDSNTYVCKTMVNGRES 170 (289)
T ss_dssp EEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTT-----CCEEEETTTEE----EESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEecCCceEeEEEccCCCcceEEEEEecCCeecCCC-----ccEEECCCCCE----EEeecccccCEEEEEEEEeCCCcc
Confidence 466799999999998877665 99986 55554321 22223334443 356669999999999999544333
Q ss_pred eeeeEEEEEE
Q psy8666 80 VSRNATLQVA 89 (124)
Q Consensus 80 ~~~~~~l~v~ 89 (124)
.+..+.|.|.
T Consensus 171 ~~~~~~l~V~ 180 (289)
T 3ejj_X 171 TSTGIWLKVN 180 (289)
T ss_dssp ECCCEEEEEE
T ss_pred ccccEEEEEE
Confidence 3567788876
No 291
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.82 E-value=2.3e-08 Score=63.89 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=52.8
Q ss_pred EecCCCEEEEEeeeccCCC-----eEEEEeCCEEeeccCC--------CCCceEEEccC----CcEEEEEEEcCCCccCC
Q psy8666 3 VAKNEPVTLNCKAEGKPEP-----TIEWYKDGELVETSKS--------DAKSQRVILPT----GSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p-----~v~w~k~g~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~i~~~~~~d~ 65 (124)
+..|+.+.|.|.+.+.+.+ .+.|+|++........ ........... ........|.+++.+|.
T Consensus 12 ~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 91 (313)
T 4fqp_A 12 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDE 91 (313)
T ss_dssp CBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGC
T ss_pred EecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhC
Confidence 4579999999999876655 3899998753211000 00001111000 00001134677799999
Q ss_pred eEEEEEeEeCCccceeeeEEEEEEeeeeee
Q psy8666 66 GVYWCLARNSVGTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 66 g~y~C~~~~~~~~~~~~~~~l~v~~~~~~~ 95 (124)
|.|.|.+.+......+..+.|.+...|.+.
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~ 121 (313)
T 4fqp_A 92 GNYTCLFVTFPQGSRSVDIWLRVLAKPQNT 121 (313)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCBBCCEEE
T ss_pred EEEEEEEeeccCcceeeeeeeeeccCCcce
Confidence 999998865433333556666666655443
No 292
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.82 E-value=4.1e-08 Score=55.19 Aligned_cols=87 Identities=18% Similarity=0.240 Sum_probs=51.5
Q ss_pred EEecCCCEEEEEeeeccCC---CeEEEEeCCEEee-----------ccCC-CCCceEEEccCC--cEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKPE---PTIEWYKDGELVE-----------TSKS-DAKSQRVILPTG--SLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~---p~v~w~k~g~~~~-----------~~~~-~~~~~~~~~~~~--~~~~~~~i~~~~~~d 64 (124)
....|+++.|.|.....+. ..+.|+|++.... .... ....+....... .......|.+++.+|
T Consensus 16 ~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D 95 (125)
T 4gos_A 16 AGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTD 95 (125)
T ss_dssp EEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHH
Confidence 3457999999999864332 3589998653110 0000 001111111111 001123467889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
.|.|.|.+.+..+.. ...+.|.|-
T Consensus 96 ~G~Y~C~v~~~~g~~-~~~v~LkVG 119 (125)
T 4gos_A 96 AGTYKCYIITSKGKG-NANLEYKTG 119 (125)
T ss_dssp CEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred CEEEEEEEEeCCCeE-EEEEEEEEC
Confidence 999999999988877 567777763
No 293
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.81 E-value=4.2e-08 Score=67.39 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=53.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
.+.+|+.+.|.|.+.+.|...+.|++++..+.... .. ...+.. .....|.+++..|.|.|.|.+.|..+.. .
T Consensus 59 ~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~-----~~-~~~~r~-~~SL~I~~v~~~D~G~Y~C~~~n~~~~~-~ 130 (527)
T 3qs9_E 59 EVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQP-----HF-DLQNRG-VVSMVILKMTETQAGEYLLFIQSEATNY-T 130 (527)
T ss_dssp EECSSCCEEEEEECSCCSSCEEEEEETTEEECCCC-----BC------C-EEEEEESSCCSSSCSEEEEEEEC--CEE-E
T ss_pred EEeccccEEEEEEEecCCceeEEEEecCCccCccc-----cc-CCCcce-EEEEEECcCChhhCeeEEEEEEeccccE-E
Confidence 47789999999999887888899999988765321 11 111222 2334578889999999999999987665 3
Q ss_pred eeEEEEE
Q psy8666 82 RNATLQV 88 (124)
Q Consensus 82 ~~~~l~v 88 (124)
..+.+.+
T Consensus 131 ~~~~v~v 137 (527)
T 3qs9_E 131 ILFTVSI 137 (527)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3444444
No 294
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.81 E-value=2.1e-08 Score=63.23 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=54.5
Q ss_pred ecCCCEEEEEeeeccCC-CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccceee
Q psy8666 4 AKNEPVTLNCKAEGKPE-PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVSR 82 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~~ 82 (124)
..|+.+.|.|.+.+.|. +.+.|++++..+.... ................|..++.+|.|.|.|.+.|..|.. +.
T Consensus 199 ~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~-~~ 273 (292)
T 4dkd_C 199 IRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQ----QSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH-ST 273 (292)
T ss_dssp CSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCB----EEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEE-EE
T ss_pred ecCCCEEEEEEecCCCCceEEEEeCCCcccccCc----cceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCc-ee
Confidence 57999999999988665 4577888877554210 111111111122234567889999999999999999987 56
Q ss_pred eEEEEEEeee
Q psy8666 83 NATLQVAVVI 92 (124)
Q Consensus 83 ~~~l~v~~~~ 92 (124)
.+.|.|....
T Consensus 274 ~~~l~V~~~~ 283 (292)
T 4dkd_C 274 SMFFRVVESA 283 (292)
T ss_dssp EEEECC----
T ss_pred EEEEEEeeCC
Confidence 7777776654
No 295
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.80 E-value=4.9e-08 Score=58.76 Aligned_cols=66 Identities=21% Similarity=0.260 Sum_probs=41.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNS 75 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~ 75 (124)
.+.+|+.+.|.|.+.+ +.+.+.|+|+|..+... ........+.......|.+++ |.|.|.|.+.+.
T Consensus 118 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-----~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRS-SYDMYHLSREGEAHERR-----LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECTTCEEEEEEEESS-CCSEEEEEETTCSSCEE-----EECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ccCCCCeEEEEEeCCC-CCceEEEEECCcccCcc-----cccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 3568999999999876 56789999998765421 000111111111112233445 999999999864
No 296
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.80 E-value=3.2e-08 Score=62.41 Aligned_cols=66 Identities=17% Similarity=0.335 Sum_probs=44.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+.+|+.+.|.|.+.+. +.|+|++..+. ........+.......|..++..|.|.|.|.+.|..|.
T Consensus 11 ~v~~G~~v~L~C~~~~~----v~W~~~~~~~~-------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 11 VLNVSSTFVLTCSGSAP----VVWERMSQEPP-------QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp ECCTTCCEEEEEEESSC----CEEEBTTBCCS-------EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred EEeCCCcEEEEEeccce----EEEECCCCCcc-------cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 46789999999998764 99999987653 12222233322233456778999999999999998865
No 297
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.80 E-value=1.4e-07 Score=57.73 Aligned_cols=88 Identities=16% Similarity=0.316 Sum_probs=53.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eecc----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VETS----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+++.|.|.+.+.|.+.+.|+|+. .. +... ......+......... ....|.+++.+|.|.|.|.+
T Consensus 35 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 113 (237)
T 3sob_L 35 SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTD-FTLTISSLQPEDFATYYCQQ 113 (237)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCE-EEEEECCCChhhCeEEEEee
Confidence 4678999999999988888999999842 11 1100 0000111111111111 22356888999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+..+........|.|..
T Consensus 114 ~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 114 SYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp CSSSSCEECCCEEEEEEC
T ss_pred ccCCceEEcCcEEEEEec
Confidence 887654334455666633
No 298
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.80 E-value=5.2e-08 Score=53.29 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=45.4
Q ss_pred EEecCCCEEEEEe-eeccC-CCeEEEEeCCEEeec----cC-C--CCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCK-AEGKP-EPTIEWYKDGELVET----SK-S--DAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~-~~~~p-~p~v~w~k~g~~~~~----~~-~--~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+++.|.|. ..+.+ .+.+.|||....... .. . ....+..... .........|.+++.+|.|.|.|.
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 90 (109)
T 1pew_A 11 SESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQ 90 (109)
T ss_dssp EECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred EEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEE
Confidence 5678999999999 76554 478999997622110 00 0 0011222220 122223345788899999999999
Q ss_pred eEeCC
Q psy8666 72 ARNSV 76 (124)
Q Consensus 72 ~~~~~ 76 (124)
+.+..
T Consensus 91 ~~~~~ 95 (109)
T 1pew_A 91 SYDAR 95 (109)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 98753
No 299
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.79 E-value=1.4e-07 Score=57.96 Aligned_cols=75 Identities=19% Similarity=0.249 Sum_probs=47.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCE--E---eeccCCC----CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGE--L---VETSKSD----AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~--~---~~~~~~~----~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+..|+.+.|.|.+.+.|.|.+.|+|++. . +...... ........ ..........|..++.+|.|.|.|.
T Consensus 138 ~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 217 (238)
T 2p1y_A 138 TVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCA 217 (238)
T ss_dssp EEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEE
T ss_pred EEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEE
Confidence 46789999999999998999999998631 1 1100000 00111111 0111123346788899999999999
Q ss_pred eEeCC
Q psy8666 72 ARNSV 76 (124)
Q Consensus 72 ~~~~~ 76 (124)
+.|..
T Consensus 218 a~n~~ 222 (238)
T 2p1y_A 218 AIDTN 222 (238)
T ss_dssp EEETT
T ss_pred EeeCC
Confidence 99973
No 300
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.79 E-value=1.1e-07 Score=53.62 Aligned_cols=75 Identities=24% Similarity=0.334 Sum_probs=46.7
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeC--CEEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKD--GELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~--g~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+.+|+++.|.|...+. +.+.+.|||+ +....... ....+... ...........|.+++.+|.|.|.|.+.+..
T Consensus 11 ~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li-~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 89 (126)
T 3moq_A 11 TKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSI-SIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYVF 89 (126)
T ss_dssp EEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEEC-CCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEE
T ss_pred EEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEE-EeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEcC
Confidence 56789999999998765 5677999984 32211000 01112211 1112223445678889999999999998865
Q ss_pred c
Q psy8666 77 G 77 (124)
Q Consensus 77 ~ 77 (124)
+
T Consensus 90 ~ 90 (126)
T 3moq_A 90 F 90 (126)
T ss_dssp E
T ss_pred C
Confidence 4
No 301
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.79 E-value=1.5e-07 Score=58.25 Aligned_cols=89 Identities=15% Similarity=0.290 Sum_probs=53.2
Q ss_pred EEecCCCEEEEEeeeccC-----CCeEEEEeCC--EEe--eccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-----EPTIEWYKDG--ELV--ETSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-----~p~v~w~k~g--~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|+. ..+ ..... ....+......... ....|.+++.+|.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~ 90 (247)
T 1svz_A 12 PVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTD-FTLKISRVEAEDLGI 90 (247)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEE
T ss_pred EecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCE-EEEEECCCCHHHCEE
Confidence 567899999999998877 6889999842 211 10000 00111111111111 234568889999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEee
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
|.|.+.|..+...+....|.|..+
T Consensus 91 Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 91 YYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp EEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEccCCccEECCCEEEEEECC
Confidence 999999876543334456666553
No 302
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.79 E-value=1.4e-08 Score=61.92 Aligned_cols=71 Identities=23% Similarity=0.460 Sum_probs=43.6
Q ss_pred cCCCE-EEEEee-eccCCCeEEEEeCCEEeeccCCCC-CceE----EEccCCcEE--EEEEEcCCCccCCeEEEEEeEeC
Q psy8666 5 KNEPV-TLNCKA-EGKPEPTIEWYKDGELVETSKSDA-KSQR----VILPTGSLF--FLRVVHGKKEQDGGVYWCLARNS 75 (124)
Q Consensus 5 ~G~~~-~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~-~~~~----~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~ 75 (124)
.|+.+ .|.|.+ .+.|.|.+.|+|++..+....... .... .....+... ....+......|.|.|.|.+.|.
T Consensus 132 ~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 132 EDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 56766 999999 899999999999998876432100 0000 011122111 11233333445699999999995
No 303
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.79 E-value=5.2e-08 Score=62.79 Aligned_cols=80 Identities=23% Similarity=0.447 Sum_probs=56.9
Q ss_pred EecCCCEEEEEe-----eeccCCCeEEEEeCCEEeeccCCCCCceEEEccC-CcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKNEPVTLNCK-----AEGKPEPTIEWYKDGELVETSKSDAKSQRVILPT-GSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G~~~~l~C~-----~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..|+.+.|.|. ..+.|.+.+.|+|++..+.... ........ +.+ .|..++..|.|.|.|.+.|..
T Consensus 132 ~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~----~~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~ 203 (339)
T 3o4o_C 132 LTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDN----EKFLSVRGTTHL----LVHDVALEDAGYYRCVLTFAH 203 (339)
T ss_dssp EETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTC----SSEEECTTSSEE----EESSCCGGGCEEEEEEEECCB
T ss_pred EECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCC----ceeEEcCCcceE----EEcccCHhhCeEEEEEEEECC
Confidence 567999999999 7888999999999998765321 12222222 223 456679999999999999987
Q ss_pred ccc---eeeeEEEEEEe
Q psy8666 77 GTA---VSRNATLQVAV 90 (124)
Q Consensus 77 ~~~---~~~~~~l~v~~ 90 (124)
+.. .+..+.|.|..
T Consensus 204 g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 204 EGQQYNITRSIELRIKK 220 (339)
T ss_dssp TTBCCEEEEEEEEEEEC
T ss_pred CCeEEEEEEEEEEEEEc
Confidence 642 24566777754
No 304
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.78 E-value=8.6e-08 Score=65.27 Aligned_cols=86 Identities=17% Similarity=0.294 Sum_probs=53.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee---cc----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE---TS----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~---~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|++ ..+. .. ......+........ .....|.+++.+|.|.|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a 89 (523)
T 2rcj_C 11 SGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGT-SASLAISGLEAEDESDYYCAS 89 (523)
T ss_pred EEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCC-EEEEEECCCChhhCEEEEEEE
Confidence 5788999999999998899999999974 2111 00 000011111111122 223456778999999999999
Q ss_pred EeCCccc--eeeeEEEEE
Q psy8666 73 RNSVGTA--VSRNATLQV 88 (124)
Q Consensus 73 ~~~~~~~--~~~~~~l~v 88 (124)
.|..|.. .+....|.|
T Consensus 90 ~n~~g~~~~~~~~~~l~V 107 (523)
T 2rcj_C 90 WNSSDNSYVFGTGTKVTV 107 (523)
T ss_pred ccCCCccccccCceEEEe
Confidence 9976532 123456666
No 305
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.78 E-value=3e-07 Score=50.44 Aligned_cols=89 Identities=16% Similarity=0.277 Sum_probs=52.4
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeCCE-----Eeec-cCCC---CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKDGE-----LVET-SKSD---AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~g~-----~~~~-~~~~---~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+.+|+.+.|.|...+.. ...+.|+|... .+.. .... ...+.... ..........|.+++.+|.|.|.|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C 91 (113)
T 1zox_A 12 SGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWC 91 (113)
T ss_dssp EEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred EEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEE
Confidence 577899999999987643 34699998642 1111 0000 00111111 111112334568889999999999
Q ss_pred EeEeCCccceeeeEEEEEEee
Q psy8666 71 LARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 71 ~~~~~~~~~~~~~~~l~v~~~ 91 (124)
.+.+..... ...+.|.|...
T Consensus 92 ~v~~~~~~~-~~~v~L~V~~~ 111 (113)
T 1zox_A 92 GITKGGLDP-MFKVTVNIGPV 111 (113)
T ss_dssp EECCSSSCC-EEEEEEEEECC
T ss_pred eeEcCCCCc-cEEEEEEEEcC
Confidence 998864333 55666666543
No 306
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.78 E-value=3.9e-07 Score=56.90 Aligned_cols=93 Identities=24% Similarity=0.332 Sum_probs=54.9
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEee--ccCC----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVE--TSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~--~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|+ +..+. .... ....+..... .........|..++.+|
T Consensus 11 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (256)
T 1nqb_A 11 LVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSED 90 (256)
T ss_dssp EECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhh
Confidence 467899999999998765 678999984 32221 0000 0001111111 11111234567889999
Q ss_pred CeEEEEEeEeCCcc----ceeeeEEEEEEeeeee
Q psy8666 65 GGVYWCLARNSVGT----AVSRNATLQVAVVIFF 94 (124)
Q Consensus 65 ~g~y~C~~~~~~~~----~~~~~~~l~v~~~~~~ 94 (124)
.|.|.|.+.+..+. .....+.|.|...+.+
T Consensus 91 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v 124 (256)
T 1nqb_A 91 SAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIEL 124 (256)
T ss_dssp CEEEEEEECCTTSSSSCSEECCCEEEEECCCCCE
T ss_pred CEEEEEEEeeccCccceeEEcCceeeeecccccE
Confidence 99999999998652 1223456766655443
No 307
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.78 E-value=1.2e-07 Score=51.96 Aligned_cols=74 Identities=18% Similarity=0.336 Sum_probs=46.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--E---Eeecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--E---LVETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~---~~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||.. . .+... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 15 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~Y~C~~ 93 (111)
T 1i3g_L 15 STSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGT-DFTLTISNVQSEDLADYFCQQ 93 (111)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCSEEEEEE
T ss_pred EEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCC-EEEEEECCCCHHHCEEEEEEE
Confidence 4678999999999987777889999853 1 11100 0 00011121111111 233457888999999999998
Q ss_pred EeCC
Q psy8666 73 RNSV 76 (124)
Q Consensus 73 ~~~~ 76 (124)
.+..
T Consensus 94 ~~~~ 97 (111)
T 1i3g_L 94 YSSY 97 (111)
T ss_dssp CSSS
T ss_pred ecCC
Confidence 8753
No 308
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.78 E-value=9.8e-08 Score=58.98 Aligned_cols=89 Identities=21% Similarity=0.352 Sum_probs=52.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccCC-------CCCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSKS-------DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+..|+.+.|.|.+.+.+.+.+.|+|. +.... .... ....+..............|.+++.+|.|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 91 (245)
T 3nfj_J 12 VQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLC 91 (245)
T ss_dssp EEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred EecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 467899999999999889999999982 21110 0000 000111111101112234568889999999999
Q ss_pred EeEeCC-----ccceeeeEEEEEEe
Q psy8666 71 LARNSV-----GTAVSRNATLQVAV 90 (124)
Q Consensus 71 ~~~~~~-----~~~~~~~~~l~v~~ 90 (124)
.+.+.. .........|.|..
T Consensus 92 ~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 92 AWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp EEECCTTTSSCCCEECCCEEEEEES
T ss_pred EEeeccCCCceeEEECCCeEEEEEc
Confidence 999832 22223445666654
No 309
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.78 E-value=1.5e-07 Score=59.08 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=52.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC----c
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV----G 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~----~ 77 (124)
.+.+|++++|.|.+.+ +.+.+.|+|+|..+.... ...............|..++..|.|.|.|.+.+.. .
T Consensus 17 ~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~-----~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~ 90 (257)
T 1b6u_A 17 LVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLH-----LIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQL 90 (257)
T ss_dssp EEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEE-----EECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSC
T ss_pred EecCCCCEEEEEecCC-CCcEEEEEECCCCCCcce-----eeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccc
Confidence 4678999999999864 567899999886543110 00000111122233467789999999999998642 1
Q ss_pred cceeeeEEEEEEe
Q psy8666 78 TAVSRNATLQVAV 90 (124)
Q Consensus 78 ~~~~~~~~l~v~~ 90 (124)
...+..+.|.|..
T Consensus 91 s~~S~~~~L~V~~ 103 (257)
T 1b6u_A 91 SAPSDPLDIVITG 103 (257)
T ss_dssp CCCCCCEEEEEEC
T ss_pred cccCCCEEEeccc
Confidence 2235667777764
No 310
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.78 E-value=2e-07 Score=57.88 Aligned_cols=88 Identities=18% Similarity=0.296 Sum_probs=53.2
Q ss_pred EEecCCCEEEEEeeeccC-----CCeEEEEeCC--EEe---ecc----CCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-----EPTIEWYKDG--ELV---ETS----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-----~p~v~w~k~g--~~~---~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|++ ... ... ......+......+.. ....|.+++.+|.|.
T Consensus 45 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~ 123 (252)
T 3bkj_L 45 PVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTD-FTLRISRVEAEDLGV 123 (252)
T ss_dssp EECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEE
T ss_pred EEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCE-EEEEECCCCcccCEE
Confidence 467899999999998877 6889999854 111 100 0000111111111211 234567889999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEe
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.|.+.+..+........|.|..
T Consensus 124 Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 124 YYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp EEEEECSBSSCEECCCEEEEECC
T ss_pred EEEEEEcCCccEECCCEEEEEeC
Confidence 99999987654333345666653
No 311
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.77 E-value=1.7e-07 Score=53.36 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=54.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC---CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc-
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD---GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG- 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~- 77 (124)
.+.+|+++.|.|...+. .+.+.|||. |..+..-.+ ...++....... .....|.+++.+|.|.|.|.+.+..+
T Consensus 29 ~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~-~~~rf~~~~~~~-~~~L~I~~~~~~Dsg~Y~C~~~~~~~~ 105 (134)
T 3kg5_A 29 ARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKL-EKGRMEESQNES-LATLTIQGIRFEDNGIYFCQQKCNNTS 105 (134)
T ss_dssp EEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCC-CTTTEEEEECSS-EEEEEECSCCTTTCEEEEEEEECTTTC
T ss_pred EEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEE-ECCeEEEEccCC-EEEEEECCCCcCcCEEEEEEEEcCCCC
Confidence 57789999999998764 577899987 333221111 112222222333 33455688899999999999887621
Q ss_pred -cceeeeEEEEEEeeee
Q psy8666 78 -TAVSRNATLQVAVVIF 93 (124)
Q Consensus 78 -~~~~~~~~l~v~~~~~ 93 (124)
........|.|...|.
T Consensus 106 ~~~fg~GT~L~V~~~p~ 122 (134)
T 3kg5_A 106 EVYQGCGTELRVMGFST 122 (134)
T ss_dssp CEEECCCEEEEEECC--
T ss_pred ceEECCCEEEEEecCCC
Confidence 2234566777766543
No 312
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.77 E-value=1e-07 Score=52.11 Aligned_cols=91 Identities=16% Similarity=0.282 Sum_probs=52.1
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeCCEE--e---ec-cCC--CCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKDGEL--V---ET-SKS--DAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~g~~--~---~~-~~~--~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...... .+.+.|||.... . .. ... ....+..... .........|.+++.+|.|.|.|.
T Consensus 7 ~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 86 (110)
T 2q87_A 7 AGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 86 (110)
T ss_dssp EECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEE
Confidence 577899999999986543 468999986421 1 10 000 0011111111 111123455788899999999999
Q ss_pred eEeCC-ccceeeeEEEEEEeee
Q psy8666 72 ARNSV-GTAVSRNATLQVAVVI 92 (124)
Q Consensus 72 ~~~~~-~~~~~~~~~l~v~~~~ 92 (124)
+.+.. |......+.+.|.++|
T Consensus 87 ~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 87 VDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp EECTTSCCBCCCSEEEEEEEC-
T ss_pred EecCccCccCCccEEEEEEEec
Confidence 99875 4111234555555544
No 313
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.77 E-value=5.7e-08 Score=53.07 Aligned_cols=72 Identities=19% Similarity=0.317 Sum_probs=44.5
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+.+.|.|...+.+ .+.+.|||+. ....... ....+... ...........|.+++.+|.|.|.|.+.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 11 TKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTI-SIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEEC-CCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEE-EeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 467899999999987653 5679999853 2111000 01112211 11122233455788899999999999887
No 314
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.77 E-value=2.8e-08 Score=61.82 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=52.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC--ccc
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV--GTA 79 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~--~~~ 79 (124)
.+.+|+++.|.|.+.+. .+.+.|+|+|..+... .........+ .|..++.+|.|.|.|.+.|.. ...
T Consensus 112 ~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~------~~~~~~~~~l----~I~~v~~~d~G~Y~C~a~n~~~~~s~ 180 (242)
T 1p6f_A 112 EVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ------RGYGKVQAEF----PLGPVTTAHRGTYRCFGSYNNHAWSF 180 (242)
T ss_dssp EEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE------EEECSSEEEE----EEEECCGGGCEEEEEEEEEETTEECC
T ss_pred ccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc------ccCCCceEEE----EeCCCccccCEEEEEEEECCCCcccC
Confidence 35689999999998653 5689999998755420 0001111222 344558999999999999863 333
Q ss_pred eeeeEEEEEEeee
Q psy8666 80 VSRNATLQVAVVI 92 (124)
Q Consensus 80 ~~~~~~l~v~~~~ 92 (124)
.+..+.|.|..++
T Consensus 181 ~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 181 PSEPVKLLVTGDI 193 (242)
T ss_dssp CCCCEEEEEEC--
T ss_pred CCCCEEEEEeccC
Confidence 4678888887643
No 315
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.76 E-value=1.3e-08 Score=61.54 Aligned_cols=72 Identities=17% Similarity=0.298 Sum_probs=46.6
Q ss_pred cCCCEEEEEeeecc-CC-CeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGK-PE-PTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+. |. +.+.|+|+|..+...... ..... ..+... ....|..++..|.|.|.|.+.|..+..
T Consensus 128 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~--~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3mj8_L 128 KTNQATLVCMINGFYPADVAVTWEADGTPITQGVKT--TQPSK-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTV 203 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE--CCCEE-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEE
T ss_pred cCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCccc--CCcCc-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccE
Confidence 58899999999875 44 489999999987532100 00011 222221 223445567789999999999987554
No 316
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.76 E-value=1.8e-08 Score=64.11 Aligned_cols=84 Identities=19% Similarity=0.275 Sum_probs=56.1
Q ss_pred cCCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCccc-e
Q psy8666 5 KNEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGTA-V 80 (124)
Q Consensus 5 ~G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~~-~ 80 (124)
.|+.+.+.|.. .+.|.|.+.|++++..+... ........ ......+...+..|.|.|.|.+.|..+.. .
T Consensus 128 ~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~-------~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 200 (308)
T 4fom_A 128 GNETVAAICIAATGKPVAHIDWEGDLGEMEST-------TTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDI 200 (308)
T ss_dssp CSCEEEEEEEEEEEBSCCEEEECCCSSBCCEE-------EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred CCceEEEEEEecCCcCCceEEEEECCcccccc-------cceeeeecccccccceEEeeeecCCccEEEEEEccCCCCce
Confidence 46778999975 68899999999998766421 11111221 12234456678899999999999987654 2
Q ss_pred eeeEEEEEEeeeeee
Q psy8666 81 SRNATLQVAVVIFFI 95 (124)
Q Consensus 81 ~~~~~l~v~~~~~~~ 95 (124)
...+.|.|..+|.+.
T Consensus 201 ~~~~~l~V~~~P~~~ 215 (308)
T 4fom_A 201 RYSFILDIQYAPEVS 215 (308)
T ss_dssp EEEEECCCCEEEEEC
T ss_pred EEeEEEEEecCCeeE
Confidence 345566676666554
No 317
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.76 E-value=2.2e-07 Score=53.60 Aligned_cols=90 Identities=16% Similarity=0.326 Sum_probs=53.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--E---Eeecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--E---LVETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~---~~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+.+.+.+.|||.. . .+... . .....+........ .....|.+++.+|.|.|.|.+
T Consensus 27 ~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~-~~sL~I~~v~~~DsG~Y~C~~ 105 (146)
T 2yc1_B 27 SVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGT-DFTLTISSLEPEDFAIYYCQQ 105 (146)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCSEEEEEE
T ss_pred EEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCC-EEEEEECCCCHHHCEEEEEEE
Confidence 4778999999999987777789999853 1 11110 0 00011221111111 233457888999999999999
Q ss_pred EeCCccceeeeEEEEEEeee
Q psy8666 73 RNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~~~ 92 (124)
.+...........|.|..++
T Consensus 106 ~~~~~~~fg~GT~L~V~~~~ 125 (146)
T 2yc1_B 106 YRYSPRTFGQGTKVEIKRAA 125 (146)
T ss_dssp CSSSSCEECCCEEEEEC---
T ss_pred ecCCCCeECCCEEEEEeCCc
Confidence 87543333455677775543
No 318
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.76 E-value=7.4e-09 Score=65.30 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=58.5
Q ss_pred EEecCCCEEEEEeeeccCC--CeEEEEeC-CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPE--PTIEWYKD-GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~--p~v~w~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+.+|+.+.|.|.+.+ |. +.+.|+++ +..+... ..........+ .|..++..|.|.|.|.+.|..+.
T Consensus 100 ~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~-----~~~~~~~~~~L----~i~~~~~~d~G~Y~C~a~n~~~~ 169 (292)
T 4dkd_C 100 VVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRH-----TNYSFSPWHGF----TIHRAKFIQSQDYQCSALMGGRK 169 (292)
T ss_dssp EEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSS-----CCEECCSSSCC----EETTCCGGGCSEEEEEECSTTSC
T ss_pred EEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccC-----CcccccCCceE----EECCCCHHHCeEEEEEEEeCCCc
Confidence 3568999999999987 44 78999987 4433321 12222233333 35667899999999999988776
Q ss_pred ceeeeEEEEEEe----eeeeeee
Q psy8666 79 AVSRNATLQVAV----VIFFISF 97 (124)
Q Consensus 79 ~~~~~~~l~v~~----~~~~~~~ 97 (124)
..+..+.|.|.. +|.+...
T Consensus 170 ~~s~~~~l~V~~~~~~~p~i~~~ 192 (292)
T 4dkd_C 170 VMSISIRLKVQKVIPGPPALTLV 192 (292)
T ss_dssp EECCCEEEEEECCCCSSCEEEEE
T ss_pred eeEEEEEEEEeCCCCCCCeEEcc
Confidence 656678888876 5554433
No 319
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.76 E-value=9.5e-09 Score=63.43 Aligned_cols=86 Identities=21% Similarity=0.322 Sum_probs=54.6
Q ss_pred EEecCCCEEEEEeeec---cCCCeEEEEeCCEEee----cc-C--------------------CCCCceEEEcc--CCcE
Q psy8666 2 VVAKNEPVTLNCKAEG---KPEPTIEWYKDGELVE----TS-K--------------------SDAKSQRVILP--TGSL 51 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~---~p~p~v~w~k~g~~~~----~~-~--------------------~~~~~~~~~~~--~~~~ 51 (124)
.+.+|+.+.|.|.+.+ .|.+.+.|+|++.... .. . .....+..... ...
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~- 91 (250)
T 2fbo_J 13 EVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPT- 91 (250)
T ss_dssp EECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCC-
T ss_pred EEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcce-
Confidence 4678999999999987 7888999999864320 00 0 00000111111 122
Q ss_pred EEEEEEcCCCccCCeEEEEEeEeCCccce----eeeEEEEEEee
Q psy8666 52 FFLRVVHGKKEQDGGVYWCLARNSVGTAV----SRNATLQVAVV 91 (124)
Q Consensus 52 ~~~~~i~~~~~~d~g~y~C~~~~~~~~~~----~~~~~l~v~~~ 91 (124)
..|.+++.+|.|.|.|.+.+..+... +..+.|.|..+
T Consensus 92 ---L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 92 ---LRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp ---EEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred ---EEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 34677799999999999999776431 34677777654
No 320
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.75 E-value=4.6e-08 Score=53.66 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=44.7
Q ss_pred EEecCCCEEEEEeeeccC----CCeEEEEeCC--EE---eeccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP----EPTIEWYKDG--EL---VETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p----~p~v~w~k~g--~~---~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+.+|+.+.|.|...+.+ .+.+.|||+. .. +.... .....+........ .....|.+++.+|.|.|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~Y 90 (111)
T 1j05_L 12 AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRT-DFTLIIDPVEADDVATY 90 (111)
T ss_dssp ECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETT-EEEEEESSCCGGGCEEE
T ss_pred EEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCC-EEEEEECCCCcccCEEE
Confidence 467899999999987766 4679999852 21 11000 00011222211111 22345788899999999
Q ss_pred EEEeEeC
Q psy8666 69 WCLARNS 75 (124)
Q Consensus 69 ~C~~~~~ 75 (124)
.|.+.+.
T Consensus 91 ~C~~~~~ 97 (111)
T 1j05_L 91 YCQQTNE 97 (111)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9998875
No 321
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.75 E-value=8.1e-08 Score=53.95 Aligned_cols=88 Identities=16% Similarity=0.272 Sum_probs=54.1
Q ss_pred EEecCCCEEEEEeeeccC----CCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP----EPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p----~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+.+|+++.|.|...+.+ .+.+.|||.. .. +... . .....+........ .....|.+++.+|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~sL~I~~v~~~DsG~Y 90 (126)
T 4ffy_L 12 AVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSET-DFTLTIDSVETDDAATY 90 (126)
T ss_dssp EEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETT-EEEEEESSCCGGGCEEE
T ss_pred EEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCC-EEEEEECCCCHHHCEEE
Confidence 578899999999998765 5679999842 11 1100 0 00011111111112 23455788899999999
Q ss_pred EEEeEeCCccceeeeEEEEEEe
Q psy8666 69 WCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 69 ~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.|.+.+.........+.|.|..
T Consensus 91 ~C~~~~~~~~~fg~gT~L~V~~ 112 (126)
T 4ffy_L 91 YCQQNNEDPYTFGGGTKLEIKG 112 (126)
T ss_dssp EEEECSSSSCEECCCEEEEEEC
T ss_pred EEEEecCCCcEECCCEEEEEec
Confidence 9999886544445566777754
No 322
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.75 E-value=3.2e-08 Score=63.34 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=45.7
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc----
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT---- 78 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~---- 78 (124)
+..|+.+.|.|.+. .|.+.+.|+|+|..+... ........+.......|..++ |.|.|.|.+.|..+.
T Consensus 230 v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~-----~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s 301 (316)
T 3vh8_G 230 VQAGESVTLSCSSR-SSYDMYHLSREGGAHERR-----LPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWS 301 (316)
T ss_dssp CCTTSCCEEEEEES-SCCSEEEEEETTSSCCEE-----EECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEEC
T ss_pred ecCCCcEEEEEECC-CCCcEEEEEECCCcCCCc-----eeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhcc
Confidence 45799999999987 477899999998765421 011111222222233445556 999999999996543
Q ss_pred ceeeeEEEEEEeee
Q psy8666 79 AVSRNATLQVAVVI 92 (124)
Q Consensus 79 ~~~~~~~l~v~~~~ 92 (124)
..+..+.|.|...|
T Consensus 302 ~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 302 DPSDPLLVSVTGNP 315 (316)
T ss_dssp CCCCCEEC------
T ss_pred CCCCcEEEEEeCCC
Confidence 34667777776544
No 323
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.74 E-value=2.9e-07 Score=55.89 Aligned_cols=89 Identities=18% Similarity=0.313 Sum_probs=52.7
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeecc--CCC----------CCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETS--KSD----------AKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~--~~~----------~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|+ +..+... ... ...+...... ........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 11 LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNED 90 (219)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 467899999999998765 678999986 3322100 000 0011111110 0111234567889999
Q ss_pred CeEEEEEeEeCCcc---ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGT---AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~---~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+. .....+.|.|..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CEEEEEEEeccCcccceeecCceEEEEec
Confidence 99999999997631 122345666654
No 324
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.74 E-value=7.4e-08 Score=57.76 Aligned_cols=57 Identities=19% Similarity=0.330 Sum_probs=40.8
Q ss_pred CC-CEEEEEeeecc-CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCc-cCCeEEEEEeEeCCccc
Q psy8666 6 NE-PVTLNCKAEGK-PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKE-QDGGVYWCLARNSVGTA 79 (124)
Q Consensus 6 G~-~~~l~C~~~~~-p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~d~g~y~C~~~~~~~~~ 79 (124)
|. .+.|.|.+.+. |.|.+.|+++|..+.. ...+.+... .. .|.|.|.|.+.|..+..
T Consensus 123 g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------------~~~l~i~~~----~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 123 MTCELHLTCSVEDADDNVSFRWEALGNTLSS-------------QPNLTVSWD----PRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp SSEEEEEEEEEESCCTTCEEEEEETTEEEES-------------SSEEEEEEC----TTTCSCCEEEEEEEETTEEE
T ss_pred CCceEEEEEEEecCCCceEEEEEeCCEEcCC-------------CCeEEEEec----cCcCCCCcEEEEEECCCCcc
Confidence 44 79999999885 5789999999976542 112222211 33 38999999999998876
No 325
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.74 E-value=3.8e-08 Score=61.32 Aligned_cols=90 Identities=18% Similarity=0.319 Sum_probs=55.9
Q ss_pred EEecCCCEEEEEeeeccCCC-eEEEEeC--CEEeec--cC-----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP-TIEWYKD--GELVET--SK-----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p-~v~w~k~--g~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+++.|.|.+.+.+.+ .+.|+|+ +..+.. .. .....+........ .....|.+++.+|.|.|.|.
T Consensus 152 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~ 230 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGT-SYSLTISSMEAEDAASYFCH 230 (257)
T ss_dssp EECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEEEEEE
T ss_pred EEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCC-EEEEEECCCChHHCEEEEEE
Confidence 46689999999999888877 8999983 322110 00 00001111111111 12345678899999999999
Q ss_pred eEeCCccceeeeEEEEEEeee
Q psy8666 72 ARNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 72 ~~~~~~~~~~~~~~l~v~~~~ 92 (124)
+.+...........|.|...+
T Consensus 231 ~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 231 QWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp ECSSSSCEECCCEEEEECCC-
T ss_pred EccCCceEEcCCEEEEEEeCC
Confidence 988655555667777776544
No 326
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.73 E-value=1.5e-07 Score=58.61 Aligned_cols=88 Identities=19% Similarity=0.269 Sum_probs=52.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee--ccC--CC----CCceEEE--ccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE--TSK--SD----AKSQRVI--LPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~--~~~--~~----~~~~~~~--~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|.+.+.|.+.+.|+|.. .... ... .. ...+... ..... .....|.+++.+|.|.|.
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~sL~I~~v~~~DsG~Y~ 92 (256)
T 3tf7_C 14 TVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDS-SFHLRKASVHRSDSAVYF 92 (256)
T ss_dssp EEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTT-EEEEEESSCCGGGCSEEE
T ss_pred EecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCC-EEEEEECCCCcccCEEEE
Confidence 5678999999999998899999999832 1110 000 00 0011111 11122 223456888999999999
Q ss_pred EEeEeCCccc---eeeeEEEEEEe
Q psy8666 70 CLARNSVGTA---VSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~~~---~~~~~~l~v~~ 90 (124)
|.+.+..+.. ......|.|..
T Consensus 93 C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 93 CAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp EEEECTTCTTCEEECCCEEEEEEC
T ss_pred EEEecCCCccceEECCCeEEEEeC
Confidence 9999875421 22344566654
No 327
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.73 E-value=1.6e-08 Score=63.10 Aligned_cols=86 Identities=19% Similarity=0.305 Sum_probs=52.5
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEe--CCEEeeccCC-------CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeE
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYK--DGELVETSKS-------DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLAR 73 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k--~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~ 73 (124)
+.+|+.+.|.|.+.+.|.+.+.|+| +|..+....+ ....+........ .....|..++.+|.|.|.|.+.
T Consensus 151 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~ 229 (257)
T 1f3r_B 151 ASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGT-DYTLTISSLQPEDVATYFCYQY 229 (257)
T ss_dssp CCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBT-EEEEEECSCCGGGCSEEEEEEE
T ss_pred EcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCC-EEEEEECCCChhhCEEEEEEEe
Confidence 4679999999999988888999999 5543211000 0001111111111 1234567889999999999999
Q ss_pred eCCccceeeeEEEEEEe
Q psy8666 74 NSVGTAVSRNATLQVAV 90 (124)
Q Consensus 74 ~~~~~~~~~~~~l~v~~ 90 (124)
|.. ......+.|.|..
T Consensus 230 n~~-~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 230 NNG-YTFGAGTKLELKA 245 (257)
T ss_dssp SSS-EEECCCCEECCSS
T ss_pred CCC-CeECCCEEEEEeC
Confidence 965 3333445555543
No 328
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.73 E-value=6.8e-07 Score=54.81 Aligned_cols=89 Identities=22% Similarity=0.295 Sum_probs=52.6
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee----ccC--C------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE----TSK--S------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~----~~~--~------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|||+. ..+. ... . ....+..... .........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (227)
T 1mju_H 11 LVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDD 90 (227)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCccc
Confidence 467899999999998776 6789999853 2211 000 0 0001111111 01112234568889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+......+.|.|..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 91 SAVYYCANKLGWFPYWGQGTLVTVSA 116 (227)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECS
T ss_pred CEEEEEEECCCCceEEcCcEEEEEcC
Confidence 99999999986432223345666654
No 329
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.73 E-value=1.4e-07 Score=51.25 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=49.7
Q ss_pred EEecCCCEEEEEeeeccCC---CeEEEEeCCEE--------eeccCCC----CCceEEEccC-CcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKPE---PTIEWYKDGEL--------VETSKSD----AKSQRVILPT-GSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~---p~v~w~k~g~~--------~~~~~~~----~~~~~~~~~~-~~~~~~~~i~~~~~~d~ 65 (124)
.+..|+++.|.|...+.+. ..+.|+|.... +...... ...+...... ........|.+++.+|.
T Consensus 5 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~ 84 (109)
T 2oyp_A 5 KVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDH 84 (109)
T ss_dssp EECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGC
T ss_pred EEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhC
Confidence 5678999999999876543 34899986521 0000000 0011111111 00011234677799999
Q ss_pred eEEEEEeEeCCccceeeeEEEEEE
Q psy8666 66 GVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
|.|.|.+.+..+.. ...+.|.|.
T Consensus 85 G~Y~C~v~~~~~~~-~~~~~l~V~ 107 (109)
T 2oyp_A 85 GTYCCRIQFPGLMN-DKKLELKLD 107 (109)
T ss_dssp EEEEEEECCSSTTC-CEEEEEEEE
T ss_pred eEEEEEEEcCCccc-ceEEEEEEE
Confidence 99999999876554 345555554
No 330
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.73 E-value=1e-06 Score=54.77 Aligned_cols=90 Identities=16% Similarity=0.212 Sum_probs=50.8
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EE--eecc---------CCCCCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--EL--VETS---------KSDAKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~--~~~~---------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|.+.+. +.+.+.|+|.. .. .... ......+..... .........|.+++.+|.
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 98 (257)
T 3gkz_A 19 LVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDT 98 (257)
T ss_dssp EECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhC
Confidence 46789999999999874 47889999832 11 1100 000011111111 111122345688899999
Q ss_pred eEEEEEeEeCCc---cceeeeEEEEEEee
Q psy8666 66 GVYWCLARNSVG---TAVSRNATLQVAVV 91 (124)
Q Consensus 66 g~y~C~~~~~~~---~~~~~~~~l~v~~~ 91 (124)
|.|.|.+.|..+ ...+....|.|..+
T Consensus 99 G~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 99 ATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp EEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred EEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 999999998621 11233456666554
No 331
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.73 E-value=7.6e-07 Score=54.96 Aligned_cols=89 Identities=17% Similarity=0.287 Sum_probs=52.3
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe--ecc----------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV--ETS----------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~--~~~----------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.| .+.+.|+|+. ... ... ......+..... .........|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 13 VVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 92 (247)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHH
Confidence 467899999999998877 5789999842 111 100 000011211111 11112234568889999
Q ss_pred CeEEEEEeEeCCcc-ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGT-AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~-~~~~~~~l~v~~ 90 (124)
.|.|.|.+.|..+. .......|.|..
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~ 119 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSS 119 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECS
T ss_pred CEEEEEeeeccCCccccCCceEEEEec
Confidence 99999999997322 123345666654
No 332
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.73 E-value=9.4e-08 Score=60.49 Aligned_cols=87 Identities=16% Similarity=0.312 Sum_probs=54.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe--CCEEeeccCC-------CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK--DGELVETSKS-------DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k--~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|.+.+.+ +.+.|+| ++..+..... ....+......... ....|..++.+|.|.|.|.+
T Consensus 173 ~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~Y~C~a 250 (282)
T 1qok_A 173 SASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTS-YSLTISRMEAEDAATYYCQQ 250 (282)
T ss_dssp EECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred EEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCE-EEEEEccCChhHCEEEEEEE
Confidence 356899999999999888 8999999 5543321000 00111111111111 23456788999999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+......+..+.|.|..
T Consensus 251 ~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 251 RSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp CSSSSCEECCCEEEEEC-
T ss_pred eeCCCceEeCCEEEEEec
Confidence 986544445566777753
No 333
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.72 E-value=5.4e-08 Score=59.81 Aligned_cols=88 Identities=18% Similarity=0.280 Sum_probs=49.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--c--cC------CCCCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--T--SK------SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~--~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|. .+.|.+.+.|+|+ +.... . .. .....+..............|.+++.+|.|.|.
T Consensus 11 ~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 89 (238)
T 2p1y_A 11 VAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 89 (238)
T ss_dssp EEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEE
T ss_pred EEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEE
Confidence 5778999999999 7778899999985 22111 0 00 000011111111111122456788999999999
Q ss_pred EEeEeCCcc----ceeeeEEEEEEe
Q psy8666 70 CLARNSVGT----AVSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~~----~~~~~~~l~v~~ 90 (124)
|.+.+..+. .......|.|..
T Consensus 90 C~~~~~~g~~~~~~~~~~~~l~V~~ 114 (238)
T 2p1y_A 90 CASGDLGQTNERLFFGHGTKLSVLG 114 (238)
T ss_dssp EEEEC------CEEECCCEEEEEEC
T ss_pred EEEEeCCCccccceeCCCeEEEEec
Confidence 999987542 112344566644
No 334
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.72 E-value=5.1e-07 Score=56.17 Aligned_cols=74 Identities=16% Similarity=0.318 Sum_probs=45.7
Q ss_pred CEEecCCCEEEEEeeec--cCCCeEEEEeCC--EEee---cc---------CCCCCceEEEc--cCCcEEEEEEEcCCCc
Q psy8666 1 MVVAKNEPVTLNCKAEG--KPEPTIEWYKDG--ELVE---TS---------KSDAKSQRVIL--PTGSLFFLRVVHGKKE 62 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~--~p~p~v~w~k~g--~~~~---~~---------~~~~~~~~~~~--~~~~~~~~~~i~~~~~ 62 (124)
+.+.+|+.+.|.|.+.+ .+.+.+.|+|.. ..+. .. ......+.... ..... ....|.+++.
T Consensus 16 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~-~~L~I~~v~~ 94 (256)
T 3juy_B 16 EVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT-AYMELRSLRS 94 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE-EEEEECSCCG
T ss_pred ceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE-EEEEECCCCc
Confidence 35778999999999987 367889999732 1110 00 00001112111 11222 2345688899
Q ss_pred cCCeEEEEEeEeC
Q psy8666 63 QDGGVYWCLARNS 75 (124)
Q Consensus 63 ~d~g~y~C~~~~~ 75 (124)
+|.|.|.|.+.+.
T Consensus 95 ~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 95 ADTAVYYCARVGE 107 (256)
T ss_dssp GGCEEEEEEECCC
T ss_pred ccCEEEEEeEEec
Confidence 9999999999986
No 335
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.72 E-value=4.3e-07 Score=55.90 Aligned_cols=85 Identities=13% Similarity=0.184 Sum_probs=49.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--------------EEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--------------ELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.+.+ +.+.+.|||.. ........ ..+..............|.+++.+|.|.
T Consensus 13 ~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 89 (240)
T 3q5y_A 13 IKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFL--PSRFSVQQFDDYHSEMNMSALELEDSAM 89 (240)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSC--CTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred eecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCccc--CCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence 4678999999999876 78899999821 11111000 0111111111112234568889999999
Q ss_pred EEEEeEe--CCccceeeeEEEEEE
Q psy8666 68 YWCLARN--SVGTAVSRNATLQVA 89 (124)
Q Consensus 68 y~C~~~~--~~~~~~~~~~~l~v~ 89 (124)
|.|.+.+ ...........|.|.
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~l~V~ 113 (240)
T 3q5y_A 90 YFCASSLRWGDEQYFGPGTRLTVL 113 (240)
T ss_dssp EEEEEESSTTBCCEECCCEEEEEE
T ss_pred EEEEEccCCCcceEEcCCEEEEEe
Confidence 9999973 222222334556665
No 336
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=1.1e-07 Score=53.98 Aligned_cols=91 Identities=21% Similarity=0.342 Sum_probs=53.1
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCE----EeeccCCCCCceEEEc----cCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGE----LVETSKSDAKSQRVIL----PTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+. +.+.+.|||++. .+.........+.... ..........|.+++.+|.|.|.|.+
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 98 (136)
T 2d9c_A 19 SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 98 (136)
T ss_dssp EEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEE
T ss_pred EEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 56789999999998765 567899999752 1111100000011000 00011223456788999999999999
Q ss_pred EeCCcc-----ceeeeEEEEEEeee
Q psy8666 73 RNSVGT-----AVSRNATLQVAVVI 92 (124)
Q Consensus 73 ~~~~~~-----~~~~~~~l~v~~~~ 92 (124)
.+.... .....+.|.|..+|
T Consensus 99 ~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 99 FRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp EECCSSSCEEEEECCCEEEEEECCC
T ss_pred EeCCCCcccceeeCCCeEEEEEeCC
Confidence 875321 11245677777654
No 337
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.72 E-value=1.3e-07 Score=58.91 Aligned_cols=86 Identities=14% Similarity=0.307 Sum_probs=52.3
Q ss_pred EEecCCCEEEEEeeeccCC-CeEEEEeC--CEEeec--cCC-----CCCceEEEccCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPE-PTIEWYKD--GELVET--SKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~-p~v~w~k~--g~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|.+.+.+. +.+.|+|. +..+.. ... ....+......... ....|.+++.+|.|.|.|.
T Consensus 160 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~Y~C~ 238 (256)
T 3juy_B 160 SLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTD-FTLTITRVEPEDFALYYCQ 238 (256)
T ss_dssp EECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCSEEEEE
T ss_pred EEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCE-EEEEECCCCHhHCEEEEEE
Confidence 4568999999999988776 89999983 222110 000 00011111111222 2345688899999999999
Q ss_pred eEeCCccceeeeEEEEE
Q psy8666 72 ARNSVGTAVSRNATLQV 88 (124)
Q Consensus 72 ~~~~~~~~~~~~~~l~v 88 (124)
+.|......+..+.|.|
T Consensus 239 ~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 239 VYGASSYTFGQGTKLER 255 (256)
T ss_dssp ECCSSCCEECCCEEEEE
T ss_pred EeeCCCceEcCCEEEEE
Confidence 99865544455555554
No 338
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.72 E-value=5.5e-08 Score=54.13 Aligned_cols=87 Identities=14% Similarity=0.260 Sum_probs=49.8
Q ss_pred EEecCCCEEEEEeeeccC----CCeEEEEeCC----EEeeccCCCCCceEEEcc-C---CcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP----EPTIEWYKDG----ELVETSKSDAKSQRVILP-T---GSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p----~p~v~w~k~g----~~~~~~~~~~~~~~~~~~-~---~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+++.|.|.....+ .+.+.|||+. ..+.........+..... . ........|.+++.+|.|.|.
T Consensus 18 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 97 (120)
T 3noi_A 18 RTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYV 97 (120)
T ss_dssp EEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEEEE
T ss_pred EEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEEEE
Confidence 567899999999987654 4568999864 332211111112221111 0 111123346788999999999
Q ss_pred EEeEeCC-ccceeeeEEEEE
Q psy8666 70 CLARNSV-GTAVSRNATLQV 88 (124)
Q Consensus 70 C~~~~~~-~~~~~~~~~l~v 88 (124)
|.+.... +........|.|
T Consensus 98 C~v~~~~~~~~fg~GT~l~V 117 (120)
T 3noi_A 98 CRVEVLGLGVGTGNGTRLVV 117 (120)
T ss_dssp EEEEETTTEEEECCCEEEEE
T ss_pred EEEEECCccceeCCCeEEEE
Confidence 9987532 222334445544
No 339
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.72 E-value=1.2e-07 Score=53.53 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=55.1
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeC--CEE---eec-cC-C---CCCceEEEcc-CCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKD--GEL---VET-SK-S---DAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~--g~~---~~~-~~-~---~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...+.. ...+.|||. +.. +.. .. . ....++.... .........|.+++.+|.|.|.
T Consensus 12 ~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 91 (129)
T 3rrq_A 12 VVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYL 91 (129)
T ss_dssp EEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEE
T ss_pred EEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEE
Confidence 577899999999987654 456899973 211 110 00 0 0011222221 1222344567888999999999
Q ss_pred EEeEeCCccc---eeeeEEEEEEeee
Q psy8666 70 CLARNSVGTA---VSRNATLQVAVVI 92 (124)
Q Consensus 70 C~~~~~~~~~---~~~~~~l~v~~~~ 92 (124)
|.+.+..+.. .+..+.|.|...+
T Consensus 92 C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 92 CGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp EEEEECGGGCEEEECCCEEEEEECCC
T ss_pred EEEEecCCCceeeEeceEEEEEecCc
Confidence 9999876543 2456788886644
No 340
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.72 E-value=4.6e-09 Score=64.45 Aligned_cols=88 Identities=17% Similarity=0.294 Sum_probs=40.1
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee--cc---C--CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE--TS---K--SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~--~~---~--~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|+. .... .. . .....+..... ........|.+++.+|.|.|.|.+
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~ 112 (233)
T 3bqu_C 34 SMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENMLSEDVADYYCLQ 112 (233)
T ss_dssp -------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC-----CCCCSEEEEEE
T ss_pred EEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCCCHHHCEEEEEEE
Confidence 4678999999999988888889999853 2110 00 0 00000100000 111112345666899999999999
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+..+...+....|.|..
T Consensus 113 ~~~~~~~~~~~~~l~V~~ 130 (233)
T 3bqu_C 113 SDNLPYTFGGGTNLEIKR 130 (233)
T ss_dssp CSSSSCCBCCCCBC---C
T ss_pred ecCCceeecCCEEEEEeC
Confidence 987654323333455543
No 341
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.71 E-value=5.3e-08 Score=66.29 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=48.3
Q ss_pred ecCCCEEEEEeeeccCCC--eEEEEeCCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGKPEP--TIEWYKDGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p--~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+.+.|++ .+.|+|+|..+...... ........+.. .....|..++..|.|.|.|.+.|..+..
T Consensus 127 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 204 (523)
T 2rcj_C 127 LQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVET--TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 204 (523)
T ss_pred cCCCceEEEEEeccccCCceEEEEecCCCCCCCceEe--ccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccc
Confidence 358899999999987664 89999999876532100 00001112221 1223455668899999999999987765
No 342
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.71 E-value=7.9e-07 Score=55.23 Aligned_cols=90 Identities=16% Similarity=0.248 Sum_probs=52.5
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EEee---cc-CC---CCCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--ELVE---TS-KS---DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~~~---~~-~~---~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+.+|+.+.|.|.+.+. +.+.+.|+|+. .... .. .. ....+......... ....|.+++.+|.|.|.|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~Y~C 91 (256)
T 3ux9_B 13 SGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTS-ASLAITGLQSEDEADYYC 91 (256)
T ss_dssp EECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTE-EEEEECSCCGGGCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCE-EEEEECCCChhhCEEEEE
Confidence 46789999999999876 77889999842 1111 00 00 00112212111222 234568889999999999
Q ss_pred EeEeCCcc--ceeeeEEEEEEeee
Q psy8666 71 LARNSVGT--AVSRNATLQVAVVI 92 (124)
Q Consensus 71 ~~~~~~~~--~~~~~~~l~v~~~~ 92 (124)
.+.+..+. .......|.|...+
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 92 QVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEETTTTEEEECCCEEEEEC---
T ss_pred EEEECCCCceEECCCEEEEEECCC
Confidence 99986432 22344566665543
No 343
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.71 E-value=2.7e-07 Score=57.49 Aligned_cols=90 Identities=16% Similarity=0.242 Sum_probs=48.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEe---eccC---------CCCCceEEE-ccCCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELV---ETSK---------SDAKSQRVI-LPTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~---~~~~---------~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+.+.|.|.+.+.+.+.+.|+|. +... .... ......... ...........|.+++.+|.|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 92 (259)
T 3omz_A 13 IRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSG 92 (259)
T ss_dssp EEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCE
T ss_pred EecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCE
Confidence 567899999999999888899999982 2111 1000 000000000 001111122456788999999
Q ss_pred EEEEEeEeCCcc--ceeeeEEEEEEee
Q psy8666 67 VYWCLARNSVGT--AVSRNATLQVAVV 91 (124)
Q Consensus 67 ~y~C~~~~~~~~--~~~~~~~l~v~~~ 91 (124)
.|.|.+.+..+. .......|.|...
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 93 VYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp EEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred EEEEEEeeCCccccEECCCCEEEEecC
Confidence 999999987652 2244556666553
No 344
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.71 E-value=3.9e-08 Score=63.10 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=55.8
Q ss_pred EEecCCCEEEEEeeecc-----CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGK-----PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-----p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+++.|.|.+.+. |.+.+.|+++|..+... .......+.......|.+++..|.|.|.|.+.+..
T Consensus 11 ~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~------~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~ 84 (313)
T 2d9q_B 11 IVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG------RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNS 84 (313)
T ss_dssp EECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC------EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSS
T ss_pred EEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc------ceEEEecCeEEEEEEEeccCCCccceEEeeecCCC
Confidence 46789999999999886 56889999999866421 11111222111223457778999999999886544
Q ss_pred ccceeeeEEEEEEeeeee
Q psy8666 77 GTAVSRNATLQVAVVIFF 94 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~ 94 (124)
+.. ...+.|.+..+|..
T Consensus 85 ~~~-~~~~~l~v~~~P~~ 101 (313)
T 2d9q_B 85 LQI-LDQVELRAGYPPAI 101 (313)
T ss_dssp EEE-EEEEEEEECCCCCC
T ss_pred cee-EEEEEEccCCCCCC
Confidence 333 34566666665543
No 345
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.70 E-value=1.4e-07 Score=51.95 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=49.8
Q ss_pred EEecCCCEEEEEeeeccC------CCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKP------EPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p------~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+.+.|.|...+.+ .+.+.|||.. .. +... . .....+........ .....|.+++.+|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~DsG 90 (114)
T 1eeq_A 12 AVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGT-DFTLTISSLQAEDVA 90 (114)
T ss_dssp EECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEESSCCGGGCE
T ss_pred EEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCC-EEEEEECCCCcccCE
Confidence 567899999999987765 3679999853 21 1100 0 00011221111111 223457888999999
Q ss_pred EEEEEeEeCCccceeeeEEEEE
Q psy8666 67 VYWCLARNSVGTAVSRNATLQV 88 (124)
Q Consensus 67 ~y~C~~~~~~~~~~~~~~~l~v 88 (124)
.|.|.+.+...........|.|
T Consensus 91 ~Y~C~~~~~~~~~fg~GT~l~V 112 (114)
T 1eeq_A 91 VYYCQQYYSHPYSFGQGTKLEI 112 (114)
T ss_dssp EEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEEeeCCeEEECCCEEEEE
Confidence 9999988753322233444444
No 346
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.69 E-value=1.2e-07 Score=51.79 Aligned_cols=83 Identities=19% Similarity=0.254 Sum_probs=50.5
Q ss_pred EEecCCCEEEEEee-eccCCCeEEEEeC-CEEeecc--C-------CCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKA-EGKPEPTIEWYKD-GELVETS--K-------SDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p~p~v~w~k~-g~~~~~~--~-------~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+..|+++.|.|.. .+.+.+.+.|++. +..+... . .....+.... ....+ .|.+++.+|.|.|.
T Consensus 14 ~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL----~I~~v~~~DsG~Y~ 89 (110)
T 2ptt_A 14 NAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGAL----HISNVRKEDKGTYY 89 (110)
T ss_dssp EEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCE----EESSCCGGGCEEEE
T ss_pred EEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccE----EECCCCcccCeEEE
Confidence 56789999999998 6667788999984 2222110 0 0000122222 22333 46777999999999
Q ss_pred EEeEeCCccceeeeEEEEEEe
Q psy8666 70 CLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.+.+... . ...+.|.|..
T Consensus 90 C~v~~~~~-~-~~~~~L~V~d 108 (110)
T 2ptt_A 90 MRVLRETE-N-ELKITLEVFD 108 (110)
T ss_dssp EEEESSSB-C-CEEEEEEEEC
T ss_pred EEEEcCCC-c-EEEEEEEEEc
Confidence 99987652 2 3355565543
No 347
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.69 E-value=1.7e-07 Score=52.03 Aligned_cols=75 Identities=20% Similarity=0.360 Sum_probs=44.1
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCE----EeeccC--CCCCc-eEEE-ccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGE----LVETSK--SDAKS-QRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~----~~~~~~--~~~~~-~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+++.|.|...+. +.+.+.|||++. .+.... ..... .... ...........|.+++.+|.|.|.|.+
T Consensus 18 ~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 97 (120)
T 2yz1_A 18 SVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVK 97 (120)
T ss_dssp EECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEE
Confidence 46789999999998765 567899999751 111100 00000 0000 011111122346777999999999998
Q ss_pred EeCC
Q psy8666 73 RNSV 76 (124)
Q Consensus 73 ~~~~ 76 (124)
.+..
T Consensus 98 ~~~~ 101 (120)
T 2yz1_A 98 FQKG 101 (120)
T ss_dssp EECC
T ss_pred EcCC
Confidence 8753
No 348
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.69 E-value=2.7e-07 Score=58.14 Aligned_cols=90 Identities=17% Similarity=0.268 Sum_probs=52.4
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--c--cC--------CCCCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--T--SK--------SDAKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~--~~--------~~~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|++ .... . .. .....+...... ........|.+++.+|
T Consensus 145 ~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 224 (276)
T 3auv_A 145 LVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAED 224 (276)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhH
Confidence 356799999999998776 5889999963 2110 0 00 000111111111 1111234567889999
Q ss_pred CeEEEEEeEeCC----ccceeeeEEEEEEee
Q psy8666 65 GGVYWCLARNSV----GTAVSRNATLQVAVV 91 (124)
Q Consensus 65 ~g~y~C~~~~~~----~~~~~~~~~l~v~~~ 91 (124)
.|.|.|.+.|.. .......+.|.|...
T Consensus 225 sG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 225 TAVYYCARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp CEEEEEEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred CEEEEEEEEcCcCCcCceEECCCEEEEEccc
Confidence 999999999972 223344567777543
No 349
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.69 E-value=4e-07 Score=55.14 Aligned_cols=87 Identities=17% Similarity=0.264 Sum_probs=50.4
Q ss_pred EEecCCCEEEEEee-eccC-CCeEEEEeCC--EEee--cc---C--CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKA-EGKP-EPTIEWYKDG--ELVE--TS---K--SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~-~~~p-~p~v~w~k~g--~~~~--~~---~--~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+..|+.+.|.|.+ .+.+ .+.+.|+|++ ..+. .. . .....+......... ....|.+++.+|.|.|.|
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C 89 (216)
T 2xzc_L 11 SAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTS-ATLGITGLQTGDEADYYC 89 (216)
T ss_dssp EECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTE-EEEEECSCCGGGCEEEEE
T ss_pred EecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCE-EEEEECCCCcccCEEEEE
Confidence 46789999999995 4432 5789999843 2211 00 0 000111111111211 234567889999999999
Q ss_pred EeEeCCc-cceeeeEEEEEE
Q psy8666 71 LARNSVG-TAVSRNATLQVA 89 (124)
Q Consensus 71 ~~~~~~~-~~~~~~~~l~v~ 89 (124)
.+.|..+ ........|.|.
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 90 GTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp EEECTTSCEEEBCCEEEEEC
T ss_pred EEEeCCCcceECCCEEEEEc
Confidence 9999875 222334556664
No 350
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.68 E-value=2.7e-07 Score=51.81 Aligned_cols=74 Identities=22% Similarity=0.400 Sum_probs=44.2
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCEE----eeccCCCCCceEEEc----cCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGEL----VETSKSDAKSQRVIL----PTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+++.|.|...+. +.+.+.|||++.. +.........+.... ..........|.+++.+|.|.|.|.+
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 93 (127)
T 2jju_A 14 SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 93 (127)
T ss_dssp EEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEE
Confidence 57789999999998765 5678999996521 111100000111110 00001122356778999999999999
Q ss_pred EeC
Q psy8666 73 RNS 75 (124)
Q Consensus 73 ~~~ 75 (124)
.+.
T Consensus 94 ~~~ 96 (127)
T 2jju_A 94 FRK 96 (127)
T ss_dssp EEC
T ss_pred EcC
Confidence 875
No 351
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.68 E-value=1.6e-08 Score=61.60 Aligned_cols=93 Identities=20% Similarity=0.169 Sum_probs=54.3
Q ss_pred EEecCCCEEEEEeeec-cCCCe----EEEEeCCEEeeccCC----C----CCceEEEccC----CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPT----IEWYKDGELVETSKS----D----AKSQRVILPT----GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~----v~w~k~g~~~~~~~~----~----~~~~~~~~~~----~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+ .+.+. +.|+|++........ . ...+...... ........|.+++.+|
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 89 (221)
T 3eow_R 10 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVED 89 (221)
T ss_dssp CCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCC
T ss_pred EEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHH
Confidence 4568999999999844 44444 899998642110000 0 0011111110 0001123467779999
Q ss_pred CeEEEEEeEeCC-ccceeeeEEEEEEeeeeee
Q psy8666 65 GGVYWCLARNSV-GTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 65 ~g~y~C~~~~~~-~~~~~~~~~l~v~~~~~~~ 95 (124)
.|.|.|.+.+.. +.. ...+.|.|..+|.+.
T Consensus 90 ~G~Y~C~~~~~~~~~~-~~~~~L~V~~~P~~~ 120 (221)
T 3eow_R 90 EGSYTCLFVTFPQGSR-SVDIWLRVLAKPQNT 120 (221)
T ss_dssp CSCBEEEEEESSSCSC-EEECCCCCCCCCEEE
T ss_pred CeEEEEEEEeCCCCce-EEEEEEEEEECCCce
Confidence 999999999976 444 556777777666554
No 352
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.68 E-value=6.6e-07 Score=49.12 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=44.8
Q ss_pred EEecCCCEEEEEeeec-cCCCeEEEEeCCEE--------eeccCC----CCCceEEEccC-CcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPTIEWYKDGEL--------VETSKS----DAKSQRVILPT-GSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~v~w~k~g~~--------~~~~~~----~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.|.... ...+.+.|+|.... +..... ....+...... ........|.+++.+|.|.
T Consensus 8 ~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 87 (116)
T 2or8_A 8 KGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGL 87 (116)
T ss_dssp EEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEE
T ss_pred EEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEE
Confidence 5778999999999765 34567999997521 100000 00011111100 0011123467889999999
Q ss_pred EEEEeEeCCcc
Q psy8666 68 YWCLARNSVGT 78 (124)
Q Consensus 68 y~C~~~~~~~~ 78 (124)
|.|.+.+..+.
T Consensus 88 Y~C~v~~~~~~ 98 (116)
T 2or8_A 88 YCCRVEIPGWF 98 (116)
T ss_dssp EEEEECCSSTT
T ss_pred EEEEEEcCCcc
Confidence 99999886543
No 353
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.68 E-value=7.5e-07 Score=54.32 Aligned_cols=89 Identities=15% Similarity=0.272 Sum_probs=53.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---eecc-C--------CCCCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VETS-K--------SDAKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~~~-~--------~~~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||+. .. +... . .....+...... ........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (220)
T 2fbj_H 11 LVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSED 90 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhh
Confidence 467899999999998765 5789999842 21 1100 0 000112222211 1122334568889999
Q ss_pred CeEEEEEeEeCCcc--ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGT--AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~--~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+. .....+.|.|..
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 91 TALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred CEEEEEEEeccccccceecCCEEEEecC
Confidence 99999999987542 123345677653
No 354
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.68 E-value=4.7e-07 Score=49.38 Aligned_cols=75 Identities=16% Similarity=0.257 Sum_probs=46.7
Q ss_pred CEEecCCCEEEEEeeeccCCC-----eEEEEeCCEE-e--eccCC--------CCCceEEEc-cCCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGKPEP-----TIEWYKDGEL-V--ETSKS--------DAKSQRVIL-PTGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~p-----~v~w~k~g~~-~--~~~~~--------~~~~~~~~~-~~~~~~~~~~i~~~~~~ 63 (124)
+.+..|+++.|.|...+.|.+ .+.|+|++.. + ..... ....+.... .+.. ..|.+++.+
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~s----L~I~~v~~~ 79 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWT----LRLHNLQIK 79 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTE----EEECSCCGG
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEE----EEEcCCChH
Confidence 357789999999998765543 3899997642 1 00000 001111111 2222 346777999
Q ss_pred CCeEEEEEeEeCCccc
Q psy8666 64 DGGVYWCLARNSVGTA 79 (124)
Q Consensus 64 d~g~y~C~~~~~~~~~ 79 (124)
|.|.|.|.+.+..+..
T Consensus 80 D~G~Y~C~v~~~~~~~ 95 (110)
T 1ncn_A 80 DKGLYQCIIHHKKPTG 95 (110)
T ss_dssp GCEEEEEEEEEECSSS
T ss_pred HCEEEEEEEEcCCCCc
Confidence 9999999999877654
No 355
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.68 E-value=1.3e-07 Score=60.18 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=55.1
Q ss_pred EEecCCCEEEEEeeeccCCC------eEEEEeC--CEEee--ccCC-----CCCceEEEccCCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP------TIEWYKD--GELVE--TSKS-----DAKSQRVILPTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p------~v~w~k~--g~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+.+.|.|.+.+.+.+ .+.|+|+ +..+. .... ....+......... ....|.+++.+|.|
T Consensus 170 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG 248 (291)
T 2gki_A 170 AVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTD-FTLTISSVQAEDLA 248 (291)
T ss_dssp EEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE-EEEEESSCCGGGCE
T ss_pred EEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCE-EEEEECCCCHHHCE
Confidence 46789999999999887765 8999985 22111 0000 00111111111111 23456888999999
Q ss_pred EEEEEeEeCCccceeeeEEEEEEeeee
Q psy8666 67 VYWCLARNSVGTAVSRNATLQVAVVIF 93 (124)
Q Consensus 67 ~y~C~~~~~~~~~~~~~~~l~v~~~~~ 93 (124)
.|.|.+.+...........|.|...+.
T Consensus 249 ~Y~C~a~~~~~~~fg~gt~l~v~~~~~ 275 (291)
T 2gki_A 249 VYYCKQSYYHMYTFGSGTKLEIKHHHH 275 (291)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECC--
T ss_pred EEEEEEccCCceEEcCCEEEEEEeeEc
Confidence 999999996554445566777766553
No 356
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.68 E-value=8.8e-07 Score=56.49 Aligned_cols=82 Identities=15% Similarity=0.055 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEeeecc-------CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGK-------PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-------p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+..|+++.|.|.+.+. |.|.+.|+|+|..+... +...... . .....|.++...+ |.|.|.+.+
T Consensus 15 ~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~------~~~~~~~-~-~~~L~i~~~~~~~-g~Y~C~a~~ 85 (303)
T 1i1r_A 15 VVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE------QYTIINR-T-ASSVTFTDIASLN-IQLTCNILT 85 (303)
T ss_dssp EEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG------GCEEEET-T-EEEEEECSCCCSE-EEEEEEEEE
T ss_pred eEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh------heeeeCC-c-EEEEEEcCcCCCc-eEEEEeccc
Confidence 57789999999999863 77899999999877532 1111121 1 1223455666664 999999988
Q ss_pred CCccce--eeeEEEEEEeeee
Q psy8666 75 SVGTAV--SRNATLQVAVVIF 93 (124)
Q Consensus 75 ~~~~~~--~~~~~l~v~~~~~ 93 (124)
. |... ...+.+.+..+|.
T Consensus 86 ~-g~~~~~~~~~~l~v~~~P~ 105 (303)
T 1i1r_A 86 F-GQLEQNVYGITIISGLPPE 105 (303)
T ss_dssp T-TTEEEEEEEEEEEEECCCC
T ss_pred C-CCcceEEEEEEEeccCCCC
Confidence 4 3221 2334555555443
No 357
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.68 E-value=1.1e-06 Score=54.19 Aligned_cols=86 Identities=24% Similarity=0.360 Sum_probs=49.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--------------CEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--------------GELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+..|+.+.|.| ..+.+.+.+.|||. +......... ..+..............|.+++.+|.|.
T Consensus 13 ~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 90 (245)
T 4ei6_B 13 IIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLF-KDQFSVERPDGSYFTLKIQPTALEDSAV 90 (245)
T ss_dssp EEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTC-CTTEEEECCTTSCEEEEECSCCGGGCEE
T ss_pred EecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCc-cCCEEEEeccCceEEEEECCCCHhHCEE
Confidence 567899999999 65778889999981 1111111000 0122222211112234568889999999
Q ss_pred EEEEeEeCC---ccceeeeEEEEEE
Q psy8666 68 YWCLARNSV---GTAVSRNATLQVA 89 (124)
Q Consensus 68 y~C~~~~~~---~~~~~~~~~l~v~ 89 (124)
|.|.+.+.. .........|.|.
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~~l~V~ 115 (245)
T 4ei6_B 91 YFCASSFWGAYAEQFFGPGTRLTVL 115 (245)
T ss_dssp EEEEEECSSTTCCCEECCCEEEEEE
T ss_pred EEEEEccCCCcceEEEcCCcEEEEe
Confidence 999998532 1222344566665
No 358
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.67 E-value=5.4e-08 Score=59.39 Aligned_cols=73 Identities=11% Similarity=0.125 Sum_probs=47.5
Q ss_pred EecCCCEEEEEeeecc---CC-CeEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKNEPVTLNCKAEGK---PE-PTIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~---p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..|+.+.|.|.+.+. |. +.+.|+|++..+.... .........+. ......|..++..|.|.|.|.+.|..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~---~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~ 99 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ---TQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKD 99 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCE---EEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETT
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcc---cccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCc
Confidence 4579999999999877 33 6899999997654210 00011111111 11234456667899999999999986
Q ss_pred cc
Q psy8666 77 GT 78 (124)
Q Consensus 77 ~~ 78 (124)
+.
T Consensus 100 ~~ 101 (218)
T 2rgs_A 100 LP 101 (218)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 359
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.67 E-value=1.3e-06 Score=53.39 Aligned_cols=89 Identities=18% Similarity=0.291 Sum_probs=53.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--c--c--------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--T--S--------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~--~--------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||+. ..+. . . ......+..... .........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (225)
T 1op3_H 11 LVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVED 90 (225)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhh
Confidence 467899999999998766 6789999852 2111 0 0 000011111111 11112234568889999
Q ss_pred CeEEEEEeEeCCc-----c--ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVG-----T--AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~-----~--~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+ . .....+.|.|..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 91 TAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp CEEEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred CEEEEEEEecCCCccccccceeecCCEEEeccc
Confidence 9999999998754 1 122345777764
No 360
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.67 E-value=3.5e-08 Score=59.63 Aligned_cols=63 Identities=17% Similarity=0.342 Sum_probs=42.0
Q ss_pred ecCCCEEEEEeeecc----CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 4 AKNEPVTLNCKAEGK----PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~----p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.+|+.+.|.|.+.+. |.|.+.|+|++...... . ....+.+ .|..+...|.|.|.|.+.|..+.
T Consensus 136 ~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~------~--~~~~~~L----~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 136 ESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP------E--TTRSSEL----TLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp CTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS------S--CCCSSEE----EECCCTTCCSCEEEEEEECC---
T ss_pred cCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC------C--ceeEEEE----EEecccHHcCcEEEEEEEeCCCC
Confidence 468999999998764 78999999988543211 0 0122223 23445788899999999997543
No 361
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.67 E-value=3e-07 Score=55.76 Aligned_cols=88 Identities=18% Similarity=0.268 Sum_probs=51.8
Q ss_pred CEEecCCCEEEEEeeecc--CCCeEEEEeCC--EEeec----cCC-------CCCceEEEccCCcEEEEEEEcCCCccCC
Q psy8666 1 MVVAKNEPVTLNCKAEGK--PEPTIEWYKDG--ELVET----SKS-------DAKSQRVILPTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~d~ 65 (124)
+.+.+|+.+.|.|.+.+. +.+.+.|||.. ..... ... ....+........ .....|.+++.+|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTST-TVDLKITSPTTEDT 87 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSS-EEEEEESSCCGGGC
T ss_pred EEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCC-EEEEEECCCCcccC
Confidence 357789999999999763 46789999732 11110 000 0011121222222 22345688899999
Q ss_pred eEEEEEeEeCCcc---ceeeeEEEEEE
Q psy8666 66 GVYWCLARNSVGT---AVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~~~~---~~~~~~~l~v~ 89 (124)
|.|.|.+.+..+. .......|.|.
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEe
Confidence 9999999987542 12334566665
No 362
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.67 E-value=2.1e-07 Score=61.86 Aligned_cols=88 Identities=16% Similarity=0.293 Sum_probs=54.0
Q ss_pred EEecCCCEEEEEeeeccCC----CeEEEEeCC--EEee--cc-----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPE----PTIEWYKDG--ELVE--TS-----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~----p~v~w~k~g--~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+.+|+.+.|.|.+.+.|. +.+.|+|++ ..+. .. ......+......... ....|.+++.+|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y 90 (438)
T 1qgc_4 12 AVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTD-FTLTIDPVEADDVATY 90 (438)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTE-EEEEESSCCGGGCEEE
T ss_pred EeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCc-EEEEeCCCcCcCCeeE
Confidence 4678999999999988776 489999963 2221 00 0000111111111111 2345678899999999
Q ss_pred EEEeEeCCccceeeeEEEEEEe
Q psy8666 69 WCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 69 ~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.|.+.|..+...+....|.|..
T Consensus 91 ~C~a~n~~~~~~~~~~~l~V~~ 112 (438)
T 1qgc_4 91 YCQQSNEVPLTFGAGTKLDLKR 112 (438)
T ss_dssp EEEECSSTTCCBCCCEEEEECC
T ss_pred EEEEecCCCccccCceeEEecC
Confidence 9999998765434456666643
No 363
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.66 E-value=3.3e-08 Score=69.50 Aligned_cols=87 Identities=20% Similarity=0.326 Sum_probs=56.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcc---
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGT--- 78 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~--- 78 (124)
.+..|+.+.|.|.+.+ |.|.+.|++++..+.... ..+.....+.+. |..++..|.|.|.|.+.+..+.
T Consensus 544 ~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~----~~~~~~~~~~Ll----I~~v~~~DsG~Y~C~A~e~~~~~~~ 614 (663)
T 1olz_A 544 FFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAES----PKYGLMGRKNLL----IFNLSEGDSGVYQCLSEERVKNKTV 614 (663)
T ss_dssp EEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCS----SSBCCTTTTCEE----ECSCCGGGCEEEEEEEEEECSSSEE
T ss_pred EEecCCcEEEEccCCC-CCCcEEEEECCeeccccC----cceEEecCCeEE----EEecCcccCeEEEEEEEECccCCCc
Confidence 4678999999999988 999999999997654211 111222344443 4555899999999999997421
Q ss_pred c-eeeeEEEEEEeeeeeeee
Q psy8666 79 A-VSRNATLQVAVVIFFISF 97 (124)
Q Consensus 79 ~-~~~~~~l~v~~~~~~~~~ 97 (124)
. ......|.|..+|.+...
T Consensus 615 ~~~~~~~~l~V~v~P~~~~~ 634 (663)
T 1olz_A 615 FQVVAKHVLEVKVVPKPVVA 634 (663)
T ss_dssp EEEEEEEEEEEEC-------
T ss_pred eEEEEEEEEEEEeCCccCCC
Confidence 1 135677888887765544
No 364
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.66 E-value=3.9e-08 Score=61.76 Aligned_cols=81 Identities=20% Similarity=0.178 Sum_probs=50.9
Q ss_pred EecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEc---cCCcEEEEEEEcCCCccCCeEEEEEeEeCC---
Q psy8666 3 VAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVIL---PTGSLFFLRVVHGKKEQDGGVYWCLARNSV--- 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~--- 76 (124)
+.+|+++.|.|.+.+. .+.+.|+|+|..+..... ..... ....+. |.+++ |.|.|.|.+.+..
T Consensus 118 V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~l~----I~~v~--D~G~Y~C~a~~~~~p~ 186 (257)
T 1b6u_A 118 VLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFS----AGPKVNGTFQADFP----LGPAT--HGGTYRCFGSFRDSPY 186 (257)
T ss_dssp CBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCB----CBCCSSSCCBEEEE----EEECC--SCEEEEEEEECSSCTT
T ss_pred cCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccc----cccccCCceeEEEE----ecccc--cCEEEEEEEEcCCCCc
Confidence 4679999999998764 468999999976543210 00000 012222 23335 9999999999752
Q ss_pred -ccceeeeEEEEEEeeeee
Q psy8666 77 -GTAVSRNATLQVAVVIFF 94 (124)
Q Consensus 77 -~~~~~~~~~l~v~~~~~~ 94 (124)
....+..+.|.|..+|..
T Consensus 187 ~~s~~S~pl~L~V~g~p~~ 205 (257)
T 1b6u_A 187 EWSNSSDPLLVSVTGNPSN 205 (257)
T ss_dssp BBCCCCCCEEECCBCCC--
T ss_pred ccccCCCCEEEEEeccCCC
Confidence 233467788888877543
No 365
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.66 E-value=8.3e-08 Score=57.97 Aligned_cols=72 Identities=18% Similarity=0.373 Sum_probs=45.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEeec--c-----CCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVET--S-----KSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|+ +..+.. . ......+......... ....|.+++.+|.|.|.|.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~~ 88 (212)
T 1nfd_E 10 SVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTT-ATLTISGAQPEDEAAYYCLS 88 (212)
T ss_dssp EEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTE-EEEEETTCCGGGCSEEEEEE
T ss_pred EEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCE-EEEEECcCCcccCEEEEEEE
Confidence 577899999999988888888999984 332210 0 0000111111111111 23456888999999999999
Q ss_pred Ee
Q psy8666 73 RN 74 (124)
Q Consensus 73 ~~ 74 (124)
.|
T Consensus 89 ~n 90 (212)
T 1nfd_E 89 SY 90 (212)
T ss_dssp EE
T ss_pred Ec
Confidence 97
No 366
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.66 E-value=1.2e-06 Score=53.22 Aligned_cols=90 Identities=13% Similarity=0.265 Sum_probs=52.1
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee---c---c--------CCCCCceEEEcc-CCcEEEEEEEcCCC
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE---T---S--------KSDAKSQRVILP-TGSLFFLRVVHGKK 61 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~---~---~--------~~~~~~~~~~~~-~~~~~~~~~i~~~~ 61 (124)
+.+..|+.+.|.|.+.+.+ .+.+.|+|+. .... . . ......+..... .........|.+++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 89 (222)
T 1q9r_B 10 GLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR 89 (222)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred eeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC
Confidence 3577899999999998765 6789999842 2110 0 0 000011111111 11112234568889
Q ss_pred ccCCeEEEEEeEeCCcc----ceeeeEEEEEEe
Q psy8666 62 EQDGGVYWCLARNSVGT----AVSRNATLQVAV 90 (124)
Q Consensus 62 ~~d~g~y~C~~~~~~~~----~~~~~~~l~v~~ 90 (124)
.+|.|.|.|.+.+..+. .......|.|..
T Consensus 90 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 90 AEDSATYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp GGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred cccCeEEEEEEeccCCcccceEeCCceEEEecc
Confidence 99999999999986541 112345666653
No 367
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.66 E-value=1.6e-07 Score=58.97 Aligned_cols=89 Identities=21% Similarity=0.322 Sum_probs=54.2
Q ss_pred EEecCCCEEEEEeeeccC------CCeEEEEeC--CEEee--ccC-----CCCCceEEEccCCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKP------EPTIEWYKD--GELVE--TSK-----SDAKSQRVILPTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p------~p~v~w~k~--g~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|+ +..+. ... .....+........ .....|.+++.+|.|
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG 94 (264)
T 2gjj_A 16 PVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGT-DFTLTIGSVKAEDLA 94 (264)
T ss_dssp EEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETT-EEEEEESSCCGGGCE
T ss_pred EecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCC-EEEEEECCCCHHHCE
Confidence 577899999999998877 678999984 32111 000 00011111111111 123456888999999
Q ss_pred EEEEEeEeCCccceeeeEEEEEEee
Q psy8666 67 VYWCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 67 ~y~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
.|.|.+.+..+........|.|..+
T Consensus 95 ~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 95 VYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp EEEEEECSSSSCEECCCEEEEEECC
T ss_pred EEEEEEecCCccEecCCEEEEEEcC
Confidence 9999999875433334556777654
No 368
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.65 E-value=5.5e-08 Score=54.33 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=54.3
Q ss_pred CEEecCCCEEEEEee-eccCCCeEEEEeCCE-EeeccC--------CCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEE
Q psy8666 1 MVVAKNEPVTLNCKA-EGKPEPTIEWYKDGE-LVETSK--------SDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 1 v~~~~G~~~~l~C~~-~~~p~p~v~w~k~g~-~~~~~~--------~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
+.+.+|+++.|.|.. .......+.||+... .+.... .....+.... .++++ .|.+++.+|.|.|.
T Consensus 14 v~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL----~I~nv~~~DsG~Y~ 89 (121)
T 2edo_A 14 MTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGAL----YISKVQKEDNSTYI 89 (121)
T ss_dssp CEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCE----EESSCCGGGCSEEE
T ss_pred EEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceE----EEeCCCHHHCeEEE
Confidence 357789999999986 333455789998653 221100 0001111222 33444 45677999999999
Q ss_pred EEeEeCCccceeeeEEEEEEeee
Q psy8666 70 CLARNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~~~~ 92 (124)
|...+..+......+.|.|..++
T Consensus 90 c~v~~~~~~~~~~~~~L~V~~~~ 112 (121)
T 2edo_A 90 MRVLKKTGNEQEWKIKLQVLDPV 112 (121)
T ss_dssp EEEEETTTEEEECCEECEEECCS
T ss_pred EEEEcCCCcEEEEEEEEEEECCC
Confidence 99988665444567778776643
No 369
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.65 E-value=6.4e-07 Score=49.68 Aligned_cols=87 Identities=22% Similarity=0.252 Sum_probs=49.1
Q ss_pred EEecCCCEEEEEeeecc----CCCeEEEEeCCEE------eecc--C-------CCCCceEEEc-----cCCcEEEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGK----PEPTIEWYKDGEL------VETS--K-------SDAKSQRVIL-----PTGSLFFLRVV 57 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~----p~p~v~w~k~g~~------~~~~--~-------~~~~~~~~~~-----~~~~~~~~~~i 57 (124)
.+..|+.+.|.|..... +.+.+.|++++.. +... . .....+.... .+.+ ..|
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s----L~I 85 (124)
T 1neu_A 10 YGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGS----IVI 85 (124)
T ss_dssp EEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCC----EEE
T ss_pred EEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEE----EEE
Confidence 56789999999997542 4678999975320 1100 0 0001111111 1122 346
Q ss_pred cCCCccCCeEEEEEeEeCCcc-ceeeeEEEEEEeee
Q psy8666 58 HGKKEQDGGVYWCLARNSVGT-AVSRNATLQVAVVI 92 (124)
Q Consensus 58 ~~~~~~d~g~y~C~~~~~~~~-~~~~~~~l~v~~~~ 92 (124)
.+++.+|.|.|.|.+.+..+. .....+.|.|...|
T Consensus 86 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 86 HNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp CSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred ccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 777999999999999987654 23456677776544
No 370
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.65 E-value=5.9e-08 Score=58.62 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=44.7
Q ss_pred cCCCEEEEEeeeccC-CC-eEEEEeCCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEGKP-EP-TIEWYKDGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p-~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+.+ .+ .+.|+|+|..+..... .........+.. .....|...+..|.|.|.|.+.|....
T Consensus 129 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~--~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 129 STAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME--TTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE--ECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred cCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee--cCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 477899999998754 43 7999999988753210 000111122221 122334444667899999999997543
No 371
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.65 E-value=1.7e-07 Score=51.86 Aligned_cols=73 Identities=19% Similarity=0.356 Sum_probs=44.6
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCC--E--Eee--cc--CCC--CCceEEEc-cCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDG--E--LVE--TS--KSD--AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g--~--~~~--~~--~~~--~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...+. +.+.+.|||.. . .+. .. ... ...+.... ..........|.+++.+|.|.|.
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 90 (116)
T 1fo0_A 11 SVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYF 90 (116)
T ss_dssp EEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 57789999999998765 55689999842 2 111 00 000 01112221 11112234557888999999999
Q ss_pred EEeEe
Q psy8666 70 CLARN 74 (124)
Q Consensus 70 C~~~~ 74 (124)
|.+.+
T Consensus 91 C~~~~ 95 (116)
T 1fo0_A 91 CAMRG 95 (116)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99887
No 372
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.65 E-value=4.9e-07 Score=60.37 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=56.4
Q ss_pred EEecCCCEEEEEeeecc-C--CCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCe--EEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEGK-P--EPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGG--VYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p--~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g--~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+.+. | .+.+.|++++..+.. .. ............+ .++.+|.| .|.|.+.|..
T Consensus 199 ~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~-------~~-~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~ 269 (450)
T 1z7z_I 199 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-------TV-TYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGN 269 (450)
T ss_dssp EEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-------EE-EEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETT
T ss_pred eEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-------eE-EecCCceeEEEEE-EeEhhhCCcEEEEEEEccCC
Confidence 46789999999999988 7 789999999987652 11 1122222222121 44789999 9999999998
Q ss_pred ccceeeeEEEEEEe
Q psy8666 77 GTAVSRNATLQVAV 90 (124)
Q Consensus 77 ~~~~~~~~~l~v~~ 90 (124)
+.. .....|.|..
T Consensus 270 g~~-~~~~~l~V~~ 282 (450)
T 1z7z_I 270 QSQ-ETLQTVTIYS 282 (450)
T ss_dssp EEE-EEEEEEEEEC
T ss_pred ccE-EEEEEEEEec
Confidence 876 4567777776
No 373
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.65 E-value=3.5e-07 Score=50.81 Aligned_cols=89 Identities=17% Similarity=0.251 Sum_probs=52.4
Q ss_pred EEecCCCEEEEEeeeccC---CCeEEEEeCC--EEe--eccC-----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP---EPTIEWYKDG--ELV--ETSK-----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p---~p~v~w~k~g--~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...+.+ .+.+.|||.. ... .... .....+........ .....|.+++.+|.|.|.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~~~~~DsG~Y~ 89 (120)
T 1oaq_L 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGN-KAALTITGAQTEDEAIYF 89 (120)
T ss_dssp EECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETT-EEEEEEESCCGGGCEEEE
T ss_pred EEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCC-eEEEEECCCChhhCeEEE
Confidence 567899999999987665 5679999842 211 1000 00011221211122 233456788999999999
Q ss_pred EEeEeCCccceeeeEEEEEEee
Q psy8666 70 CLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
|.+.+...........|.|...
T Consensus 90 C~~~~~~~~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 90 CALWYSNHLVFGGGTKLTVLGQ 111 (120)
T ss_dssp EEEEETTEEEECCCEEEEECC-
T ss_pred EEEccCCCcEECCCEEEEEcCC
Confidence 9998764333344557776554
No 374
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.65 E-value=2.8e-07 Score=59.74 Aligned_cols=87 Identities=22% Similarity=0.381 Sum_probs=52.4
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeec--c----------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVET--S----------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~--~----------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|+ +..+.. . ......+..... .........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSED 90 (344)
T ss_dssp EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 467899999999998763 678999986 332210 0 000011121111 11111234568889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
.|.|.|.+.|..+.. .....|.|.
T Consensus 91 ~G~Y~C~~~n~~~~~-~~~~~l~V~ 114 (344)
T 1za6_B 91 TAVYFCTRSLNMAYW-GQGTLVTVS 114 (344)
T ss_dssp CEEEEEEETTTTCEE-CCCEEEEEC
T ss_pred CEEEEEEEecCccee-cCcEEEEEe
Confidence 999999999854332 345667765
No 375
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.64 E-value=3.6e-07 Score=56.76 Aligned_cols=73 Identities=21% Similarity=0.347 Sum_probs=45.2
Q ss_pred EecCCCEEEEEeeeccC--CCeEEEEeC--CEEeecc--CCC----------CCceEEEc-cCCcEEEEEEEcCCCccCC
Q psy8666 3 VAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETS--KSD----------AKSQRVIL-PTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~--~~~----------~~~~~~~~-~~~~~~~~~~i~~~~~~d~ 65 (124)
+.+|+.+.|.|.+.+.+ .+.+.|+|+ +..+... ... ...+.... ..........|.+++.+|.
T Consensus 146 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 225 (256)
T 3ux9_B 146 VQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDT 225 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhC
Confidence 56799999999998766 788999986 3322100 000 00111111 1111122345688899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.|.
T Consensus 226 G~Y~C~~~~~ 235 (256)
T 3ux9_B 226 AVYYCARYID 235 (256)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEEcC
Confidence 9999999985
No 376
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.64 E-value=1.3e-06 Score=54.38 Aligned_cols=89 Identities=21% Similarity=0.359 Sum_probs=51.3
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeecc--C----------CCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETS--K----------SDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~--~----------~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|||. +..+... . .....+..... .........|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 13 LVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSED 92 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCccc
Confidence 467899999999998765 678999973 2211100 0 00001111111 11112224568889999
Q ss_pred CeEEEEEeEeCCc---cceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVG---TAVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~---~~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+ ........|.|..
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 9999999998721 1123455666653
No 377
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.64 E-value=4.1e-07 Score=49.97 Aligned_cols=86 Identities=16% Similarity=0.316 Sum_probs=49.2
Q ss_pred EEecCCCEEEEEeeeccC-----CCeEEEEeCC--EE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-----EPTIEWYKDG--EL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-----~p~v~w~k~g--~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+.+.|.|...+.+ .+.+.|||.. .. +... . .....+........ .....|.+++.+|.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~v~~~DsG~ 90 (113)
T 1dlf_L 12 PVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGT-DFTLKISRVEAEDLGV 90 (113)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEECSCCGGGCEE
T ss_pred EEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCC-EEEEEECCCChHHCEE
Confidence 567899999999987655 4679999843 21 1100 0 00011111111112 2234568889999999
Q ss_pred EEEEeEeCCccceeeeEEEEE
Q psy8666 68 YWCLARNSVGTAVSRNATLQV 88 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v 88 (124)
|.|.+.+...........|.|
T Consensus 91 Y~C~~~~~~~~~fg~gT~l~V 111 (113)
T 1dlf_L 91 YFCSQSTHVPFTFGSGTKLEI 111 (113)
T ss_dssp EEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEecCCCcEECCCEEEEE
Confidence 999988753222233444443
No 378
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.64 E-value=3.3e-08 Score=59.72 Aligned_cols=73 Identities=12% Similarity=0.168 Sum_probs=45.8
Q ss_pred cCCCEEEEEeeec-cCCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEG-KPEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~-~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+ .|.+ .+.|+|+|..+..... .........++. ......|..++..|.|.|.|.+.|....
T Consensus 126 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 126 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL-NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE-EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCcEEEEEEEeeecCCceEEEEEcCCCcCcceee-ecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 4778999999987 5665 7999999988763200 000000011111 1223345566789999999999997654
No 379
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.64 E-value=5e-07 Score=60.06 Aligned_cols=88 Identities=18% Similarity=0.336 Sum_probs=52.3
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeeccC--C----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETSK--S----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~~--~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.| .+.+.|+|+ +..+.... . .......... .........|..++.+|
T Consensus 229 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 308 (438)
T 1qgc_4 229 LVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSAD 308 (438)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhh
Confidence 356899999999999888 678999986 54332100 0 0001111111 11112234567889999
Q ss_pred CeEEEEEeEeCCcc----ceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGT----AVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~----~~~~~~~l~v~ 89 (124)
.|.|.|.+.|..+. .......+.|.
T Consensus 309 ~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~ 337 (438)
T 1qgc_4 309 TAMYYCVRREDGGDEGFAYWGQGTVVTVS 337 (438)
T ss_dssp CCEEEEEECCSSSCCCCCSBCCCEEEEEC
T ss_pred CEEEEEEEEccCCCccceeeCCCEEEEEe
Confidence 99999999984431 11234566665
No 380
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.64 E-value=6.1e-08 Score=57.35 Aligned_cols=74 Identities=19% Similarity=0.329 Sum_probs=47.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeecc--C-------CCCCceEEEc----cCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETS--K-------SDAKSQRVIL----PTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~--~-------~~~~~~~~~~----~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+..|+.+.|.|.+.+.|.+.+.|+|++...... . .....+.... ..+. ....|.+++..|.|.|
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 6 LGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGN--FPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTB--CCEEECSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCe--EEEEEecCCHHHCEEE
Confidence 5788999999999988899999999987532110 0 0000111111 1111 1124567799999999
Q ss_pred EEEeEeCCc
Q psy8666 69 WCLARNSVG 77 (124)
Q Consensus 69 ~C~~~~~~~ 77 (124)
.|.+.+..+
T Consensus 84 ~C~~~~~~~ 92 (184)
T 2ny1_B 84 ICEVEDQKE 92 (184)
T ss_dssp EEEETTEEE
T ss_pred EEEEEcCCC
Confidence 999988643
No 381
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.64 E-value=8e-08 Score=54.25 Aligned_cols=74 Identities=20% Similarity=0.299 Sum_probs=44.1
Q ss_pred EEecCCCEEEEEeeec---cCCCeEEEEeCCEEe-----eccC--CC----------------CC--ceEEEccCCcEEE
Q psy8666 2 VVAKNEPVTLNCKAEG---KPEPTIEWYKDGELV-----ETSK--SD----------------AK--SQRVILPTGSLFF 53 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~---~p~p~v~w~k~g~~~-----~~~~--~~----------------~~--~~~~~~~~~~~~~ 53 (124)
.+..|+++.|.|.... .+.+.+.|+|+.... .... .. .. .+......+. .
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~ 92 (135)
T 1xt5_A 15 EVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAA--P 92 (135)
T ss_dssp EEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTS--C
T ss_pred EEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCC--C
Confidence 4678999999999753 567889999864321 1000 00 00 1111111100 1
Q ss_pred EEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 54 LRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 54 ~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
...|.+++.+|.|.|.|.+.+...
T Consensus 93 sL~I~~v~~~D~G~Y~C~v~~~~~ 116 (135)
T 1xt5_A 93 TLRLTHVHPQDGGRYWCQVAQWSI 116 (135)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSC
T ss_pred eEEECCCChhhCcEEEEEEEcCCc
Confidence 234677799999999999998643
No 382
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.64 E-value=5e-08 Score=59.10 Aligned_cols=55 Identities=22% Similarity=0.465 Sum_probs=41.2
Q ss_pred ecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 4 AKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
..|+.+.|.|.+ |.|.+.|+|+|..+... ......+.+. .++..|.|.|.|.+.+
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~---------~~~~~~L~i~----~v~~~DsG~Y~C~~~~ 70 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL---------TEDKKKWNLG----SNAKDPRGMYQCKGSQ 70 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE---------ESSCCCEEEE----EGGGCCEEEEEEESSS
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC---------CCCCCeEEeC----CCCcCCCEEEEEEecC
Confidence 578999999988 78899999999877531 1123445433 4489999999999655
No 383
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.63 E-value=3.8e-07 Score=49.97 Aligned_cols=73 Identities=26% Similarity=0.495 Sum_probs=45.6
Q ss_pred EEecCCCEEEEEeee-ccCCCeEEEEeC--CEE---eec-c--CCC------C-CceEEEccCCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAE-GKPEPTIEWYKD--GEL---VET-S--KSD------A-KSQRVILPTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~-~~p~p~v~w~k~--g~~---~~~-~--~~~------~-~~~~~~~~~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|... +.+.+.+.|||. +.. +.. . ... . ..+........ .....|.+++.+|.
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~~~~~Ds 88 (111)
T 2qhl_A 10 TVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQ-KFDLNIIGTREDDG 88 (111)
T ss_dssp ECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSS-BEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCC-eEEEEECCCChhHC
Confidence 467899999999987 666778999984 221 110 0 000 0 12222222222 23345788899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.+.
T Consensus 89 G~Y~C~~~~~ 98 (111)
T 2qhl_A 89 GEYFCGEVEG 98 (111)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEccC
Confidence 9999998874
No 384
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.63 E-value=1.8e-07 Score=57.95 Aligned_cols=73 Identities=21% Similarity=0.335 Sum_probs=44.9
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeeccC--C----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETSK--S----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~~--~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|+ +..+.... . ....+..... .........|.+++.+|
T Consensus 142 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 221 (250)
T 3esu_F 142 LVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVD 221 (250)
T ss_dssp EECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCccc
Confidence 356899999999998766 788999987 43321100 0 0001111111 11111234568889999
Q ss_pred CeEEEEEeEe
Q psy8666 65 GGVYWCLARN 74 (124)
Q Consensus 65 ~g~y~C~~~~ 74 (124)
.|.|.|.+.+
T Consensus 222 sG~Y~C~~~~ 231 (250)
T 3esu_F 222 SAVYFCARSG 231 (250)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999997
No 385
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.63 E-value=3.3e-06 Score=53.38 Aligned_cols=90 Identities=20% Similarity=0.332 Sum_probs=52.8
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--ccCC----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--TSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|++ ..+. .... ....+..... .........|.+++.+|
T Consensus 37 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 37 LVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSED 116 (282)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhh
Confidence 467899999999998765 5789999853 2111 0000 0001111111 11112234568889999
Q ss_pred CeEEEEEeEeCCcc----ceeeeEEEEEEee
Q psy8666 65 GGVYWCLARNSVGT----AVSRNATLQVAVV 91 (124)
Q Consensus 65 ~g~y~C~~~~~~~~----~~~~~~~l~v~~~ 91 (124)
.|.|.|.+.|..|. .....+.|.|...
T Consensus 117 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~ 147 (282)
T 1qok_A 117 TAVYYCNEGTPTGPYYFDYWGQGTTVTVSSG 147 (282)
T ss_dssp CEEEEEEEECSSSSCCCEEECCCEEEEEEC-
T ss_pred CEEEEEEeccCCCccceeeeCCCEEEEEecC
Confidence 99999999998651 1223456676654
No 386
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.62 E-value=3e-07 Score=54.61 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=52.9
Q ss_pred EEecCCCEEEEEeeec-cCCCeEEEEeC-CEEeeccC---------CCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEG-KPEPTIEWYKD-GELVETSK---------SDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p~p~v~w~k~-g~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...+ .+.+.+.|+|. +..+.... .....+..+ ..++++ .|.+++.+|.|.|.
T Consensus 10 ~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL----~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 10 NAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGAL----RIYNVSKEDRGDYY 85 (180)
T ss_dssp EEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCE----EECSCCGGGCEEEE
T ss_pred EEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccE----EEcCCCHHHCeEEE
Confidence 5678999999998744 34688999994 33222100 000012222 234444 35667999999999
Q ss_pred EEeEeCCccceeeeEEEEEEee
Q psy8666 70 CLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
|.+.+.. .. ...+.|.|..+
T Consensus 86 C~v~~~~-~~-~~~~~L~V~~~ 105 (180)
T 2dru_A 86 MRMLHET-ED-QWKITMEVYEM 105 (180)
T ss_dssp EEEESSS-EE-EEEEEEEEECC
T ss_pred EEEEcCC-eE-EEEEEEEEECC
Confidence 9987765 33 55677777654
No 387
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.62 E-value=4.3e-08 Score=59.18 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=46.1
Q ss_pred cCCCEEEEEeeecc--CCCeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGK--PEPTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~--p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+. |.+.+.|+|+|..+..... .........+... ....+...+..|.|.|.|.+.|..+..
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~ 201 (211)
T 3tv3_L 125 QANKATLVCLISDFYPGAVTVAWKADSSPVKAGVE--TTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 201 (211)
T ss_dssp HTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEE--ECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEE
T ss_pred cCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcc--cCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCE
Confidence 48999999999875 3578999999988753100 0011111222221 223344445678999999999987554
No 388
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.62 E-value=7.6e-07 Score=55.49 Aligned_cols=76 Identities=22% Similarity=0.343 Sum_probs=46.5
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeec---cC--------CCCCceEEEccC-CcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVET---SK--------SDAKSQRVILPT-GSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~---~~--------~~~~~~~~~~~~-~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|+ +..+.. .. .....+...... ........|.+++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 11 LVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp EECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCC
T ss_pred cccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccC
Confidence 567899999999998875 688999985 221110 00 000111111111 11112345677899999
Q ss_pred eEEEEEeEeCCc
Q psy8666 66 GVYWCLARNSVG 77 (124)
Q Consensus 66 g~y~C~~~~~~~ 77 (124)
|.|.|.+.|..|
T Consensus 91 G~Y~C~a~n~~g 102 (257)
T 1f3r_B 91 GTYYCTRDLYGG 102 (257)
T ss_dssp EEEEEEEESSSS
T ss_pred EEEEEEEccccc
Confidence 999999999753
No 389
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.62 E-value=1e-06 Score=53.50 Aligned_cols=88 Identities=19% Similarity=0.369 Sum_probs=51.5
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-ccC--CC--------CCceEEEccC-CcEEEEEEEcCCCc
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TSK--SD--------AKSQRVILPT-GSLFFLRVVHGKKE 62 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~~--~~--------~~~~~~~~~~-~~~~~~~~i~~~~~ 62 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|++ .. +. ... .. ...+...... ........|.+++.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (220)
T 1pz5_B 11 LVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRA 90 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCH
Confidence 467899999999998766 6889999853 21 10 000 00 0011111110 11112345678899
Q ss_pred cCCeEEEEEeEeCCcc--ceeeeEEEEEE
Q psy8666 63 QDGGVYWCLARNSVGT--AVSRNATLQVA 89 (124)
Q Consensus 63 ~d~g~y~C~~~~~~~~--~~~~~~~l~v~ 89 (124)
+|.|.|.|.+.+..+. .......|.|.
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 119 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVGAMDYWGQGTSVTVS 119 (220)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred HHCEEEEEEEecCCcccceECCCEEEEEc
Confidence 9999999999987532 11234566665
No 390
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.61 E-value=8.3e-07 Score=48.90 Aligned_cols=88 Identities=11% Similarity=0.171 Sum_probs=50.2
Q ss_pred EEecCCCEEEEEeeecc---CCCeEEEEeCC--E---Eeec-c-------CCCCCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGK---PEPTIEWYKDG--E---LVET-S-------KSDAKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~---p~p~v~w~k~g--~---~~~~-~-------~~~~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|..... +...+.|||.. . .+.. . ......+...... ........|.+++.+|
T Consensus 9 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~D 88 (116)
T 3bj9_1 9 SSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPED 88 (116)
T ss_dssp EEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChhH
Confidence 57789999999998643 45679999843 1 1110 0 0000111111111 1112345578889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
.|.|.|.+.+...........|.|.
T Consensus 89 sG~Y~C~~~~~~~~~fg~gT~L~V~ 113 (116)
T 3bj9_1 89 EAMYYCAMGARSTHVFGSGTQLTVL 113 (116)
T ss_dssp CEEEEEEECCSSCCEECCCEEEEEE
T ss_pred CEEEEEEEeCCCCcEECCCEEEEEe
Confidence 9999999887543333344555554
No 391
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.61 E-value=1.1e-06 Score=47.89 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=51.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCC-ccce
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSV-GTAV 80 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~-~~~~ 80 (124)
.+..|++++|.|.... ....+.|+|+|....... ................|..++..|.|.|+|...+.. .+..
T Consensus 19 vv~~G~~VtL~C~~~~-~~~~f~l~k~g~~~~~~~----~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~~~~~~~S~~ 93 (106)
T 3kgr_A 19 VIPLGSHVTFVCRGPV-GVQTFRLERESRSTYNDT----EDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQ 93 (106)
T ss_dssp EEETTCCEEEEEEECT-TCCEEEEEEGGGTEEEEE----CCCEEEETTEEEEEEEESSCCGGGCEEEEEEEEETTEECCC
T ss_pred ccCCCCeEEEEEEccC-CCcEEEEEECCCcccccc----ccccccCCCCcceEEEecCCCcCCCceEEEEeeCCCcccCC
Confidence 3668999999998754 335688999986542100 000001111222333457779999999999988754 3344
Q ss_pred eeeEEEEEEe
Q psy8666 81 SRNATLQVAV 90 (124)
Q Consensus 81 ~~~~~l~v~~ 90 (124)
+..+.|.|..
T Consensus 94 Sdpl~L~Vtg 103 (106)
T 3kgr_A 94 SDYLELLVKE 103 (106)
T ss_dssp CCCEEEEEEC
T ss_pred CCCEEEEEeC
Confidence 6677777654
No 392
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.61 E-value=4e-07 Score=54.99 Aligned_cols=72 Identities=22% Similarity=0.288 Sum_probs=45.6
Q ss_pred ecCCCEEEEEeeeccCC----CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccC---CeEEEEEeEeCC
Q psy8666 4 AKNEPVTLNCKAEGKPE----PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQD---GGVYWCLARNSV 76 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~----p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d---~g~y~C~~~~~~ 76 (124)
..|+.+.|.|.+.+.++ +.+.|+|++..+.... .........+.+.+... ..+...| .|.|.|.+.|..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~---~~~~~~~~~g~~~~~~~-l~i~~~d~~d~g~Y~C~a~n~~ 91 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK---TKPREEQYNSTYRVVSV-LTVLHQDWLNGKEYKCKVSNKA 91 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCE---ECCCEECTTSCEEEEEE-EECCHHHHHTTCCEEEEEECTT
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcc---cCCceeccCCcEEEEEE-EEEEHHHccCCceEEEEEEcCc
Confidence 47999999999988753 4899999998765321 01111223344333222 1124445 999999999987
Q ss_pred ccc
Q psy8666 77 GTA 79 (124)
Q Consensus 77 ~~~ 79 (124)
+..
T Consensus 92 ~~~ 94 (207)
T 1l6x_A 92 LPA 94 (207)
T ss_dssp SSS
T ss_pred CCc
Confidence 653
No 393
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.60 E-value=3.5e-07 Score=51.19 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=22.0
Q ss_pred EEecCCCEEEEEeeeccCCC----eEEEEeC
Q psy8666 2 VVAKNEPVTLNCKAEGKPEP----TIEWYKD 28 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p----~v~w~k~ 28 (124)
.+..|+.+.|.|.....+.+ .+.|+|.
T Consensus 13 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~ 43 (128)
T 3r0n_A 13 RGQLGGTVELPCHLLPPVPGLYISLVTWQRP 43 (128)
T ss_dssp ECCTTSCEEECCEEESCCTTCEEEEEEEECT
T ss_pred EEEcCCCEEEEEEeecCCCCCcEEEEEEEEe
Confidence 45679999999998876655 7899996
No 394
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.60 E-value=3e-06 Score=45.87 Aligned_cols=76 Identities=17% Similarity=0.165 Sum_probs=48.6
Q ss_pred EecCCCEEEEEeeeccCC----CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc-
Q psy8666 3 VAKNEPVTLNCKAEGKPE----PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG- 77 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~----p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~- 77 (124)
+..|++++|.| .. ... -.+.|+|+|...... ............|..++..|.|.|+|...+..+
T Consensus 20 v~~G~~VTL~C-~~-~~~~~~~~~f~l~k~g~~~~~~---------~~~~~~~~a~f~i~~vt~~~aG~Y~C~~~~~~~~ 88 (102)
T 4esk_A 20 ISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFMEK---------STEPYKTEDEFEIGPVNETITGHYSCIYSKGITW 88 (102)
T ss_dssp EETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEEE---------ECCSSCSEEEEEECSCCGGGCEEEEEEEEETTTE
T ss_pred ccCCCcEEEEE-CC-CcCCCcccEEEEEECCcccccc---------ccCCCCcceEEEeCcCCcccCeeEEEEEeCCCcc
Confidence 56799999999 63 233 467899999754310 111111122334567799999999999887654
Q ss_pred cceeeeEEEEEE
Q psy8666 78 TAVSRNATLQVA 89 (124)
Q Consensus 78 ~~~~~~~~l~v~ 89 (124)
+..+..+.|.|.
T Consensus 89 S~~Sdpl~L~Vt 100 (102)
T 4esk_A 89 SERSKTLELKVI 100 (102)
T ss_dssp EEECCCEEEEEE
T ss_pred ccCcCCEEEEEE
Confidence 334666666654
No 395
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.60 E-value=3.5e-07 Score=55.19 Aligned_cols=90 Identities=17% Similarity=0.284 Sum_probs=53.1
Q ss_pred EEecCCCEEEEEeeecc-------CCCeEEEEeCCEEe------eccC------CCCCceEEEccCC-cEEEEEEEcCCC
Q psy8666 2 VVAKNEPVTLNCKAEGK-------PEPTIEWYKDGELV------ETSK------SDAKSQRVILPTG-SLFFLRVVHGKK 61 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-------p~p~v~w~k~g~~~------~~~~------~~~~~~~~~~~~~-~~~~~~~i~~~~ 61 (124)
.+..|+.+.|.|.+.+. +.+.+.|+|++... .... .....+.....+. .......|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 11 TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 56789999999998753 46789999986531 1000 0001122222110 000113457779
Q ss_pred ccCCeEEEEEeEeCCccce---eeeEEEEEEee
Q psy8666 62 EQDGGVYWCLARNSVGTAV---SRNATLQVAVV 91 (124)
Q Consensus 62 ~~d~g~y~C~~~~~~~~~~---~~~~~l~v~~~ 91 (124)
.+|.|.|.|.+.+..+... +..+.|.|..+
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~ 123 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL 123 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECC
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecC
Confidence 9999999999998753221 24667777664
No 396
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.60 E-value=9.1e-08 Score=57.93 Aligned_cols=72 Identities=14% Similarity=0.266 Sum_probs=41.9
Q ss_pred cCCCEEEEEeeec-cCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEG-KPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~-~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+ .|.| .+.|+|+|..+..... ........+... ....+...+..|.|.|.|.+.|..+..
T Consensus 135 ~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~---~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 210 (218)
T 3s96_B 135 KENKATLVCLISNFSPSGVTVAWKANGTPITQGVD---TSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTV 210 (218)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEC-----------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEE
T ss_pred cCCcEEEEEEECcccCCCeEEEEEECCEECcCcee---cCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcc
Confidence 3677999999987 5667 8999999988763210 000011122222 112233335567999999999987654
No 397
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.58 E-value=1.7e-06 Score=54.10 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=50.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEe--CCEEeec---c-------CCCCC-ceEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYK--DGELVET---S-------KSDAK-SQRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k--~g~~~~~---~-------~~~~~-~~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+..|+.+.|.|.+. .+.+.+.||| .+..... . ..... .+..............|.+++.+|.|.|
T Consensus 37 ~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 115 (268)
T 3pl6_D 37 VTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVY 115 (268)
T ss_dssp EEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEE
T ss_pred EecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEE
Confidence 467899999999986 5778999998 2221100 0 00000 1111221111112345678899999999
Q ss_pred EEEeEeC-CccceeeeEEEEEEe
Q psy8666 69 WCLARNS-VGTAVSRNATLQVAV 90 (124)
Q Consensus 69 ~C~~~~~-~~~~~~~~~~l~v~~ 90 (124)
.|.+.+. ..........|.|..
T Consensus 116 ~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 116 LCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp EEEEESSSSSCEECCCEEEEEES
T ss_pred EEEEecCCCceeeCCcEEEEEec
Confidence 9999974 112223445666654
No 398
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.58 E-value=1.3e-06 Score=52.64 Aligned_cols=86 Identities=19% Similarity=0.317 Sum_probs=50.2
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEee--ccCCC---------CCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVE--TSKSD---------AKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~--~~~~~---------~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
.+..|+.+.|.|.+.+.+ .+.+.|+|+ +.... ..... ...+..... .........|.+++.+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 90 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 90 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccC
Confidence 577899999999998765 478999985 32211 00000 001111111 011112345688899999
Q ss_pred eEEEEEeEeCCccceeeeEEEEEE
Q psy8666 66 GVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
|.|.|.+.+.... .....|.|.
T Consensus 91 G~Y~C~~~~~~~~--~~~~~l~V~ 112 (210)
T 3d9a_H 91 ATYYCANWDGDYW--GQGTLVTVS 112 (210)
T ss_dssp EEEEEEETTSSCB--CCCEEEEEC
T ss_pred EEEEEEEecCccc--ccceEEEec
Confidence 9999999986411 233556654
No 399
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.58 E-value=7.5e-07 Score=63.07 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=56.0
Q ss_pred EEecCCCEEEEEeeec--cCCCeEEEEeCCEEeeccCCCCCceEEEc---cCCcEEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 2 VVAKNEPVTLNCKAEG--KPEPTIEWYKDGELVETSKSDAKSQRVIL---PTGSLFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~--~p~p~v~w~k~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.+..|+.+.|.|.+.+ .+.+.+.|++++..+....... ...... ..........|..++..|.|.|.|.+.|..
T Consensus 235 ~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 313 (772)
T 3v2a_R 235 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVN-RDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 313 (772)
T ss_dssp EEETTCCEEEEEEEEECTTCCCEEEEECC--------CEE-EEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSS
T ss_pred EEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeee-ccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCC
Confidence 4678999999999987 4456799999987654210000 000000 111122344567889999999999999988
Q ss_pred ccceeeeEEEEEEeeeeee
Q psy8666 77 GTAVSRNATLQVAVVIFFI 95 (124)
Q Consensus 77 ~~~~~~~~~l~v~~~~~~~ 95 (124)
+.. +..+.|.|..+|.+.
T Consensus 314 ~~~-~~~~~l~V~~~p~~~ 331 (772)
T 3v2a_R 314 MTK-KNSTFVRVHEKPFVA 331 (772)
T ss_dssp CEE-EEEEEEEEECCCC--
T ss_pred cce-eEEEEEEEeCCCeeE
Confidence 765 567888887766543
No 400
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.58 E-value=8.6e-07 Score=55.94 Aligned_cols=74 Identities=18% Similarity=0.311 Sum_probs=46.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee----ccC-----C---CCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE----TSK-----S---DAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~----~~~-----~---~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+.+.|.|.+.+.+.+.+.|+|+. .... ... . ....+..............|.+++.+|.|.
T Consensus 35 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 114 (279)
T 2wbj_D 35 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 114 (279)
T ss_dssp EEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEE
T ss_pred EecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEE
Confidence 4678999999999987788899999853 1110 000 0 001122222111112234568889999999
Q ss_pred EEEEeEeC
Q psy8666 68 YWCLARNS 75 (124)
Q Consensus 68 y~C~~~~~ 75 (124)
|.|.+.+.
T Consensus 115 Y~C~~~~~ 122 (279)
T 2wbj_D 115 YICSARDL 122 (279)
T ss_dssp EEEEEEET
T ss_pred EEEEEccc
Confidence 99999984
No 401
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.58 E-value=1.1e-08 Score=61.84 Aligned_cols=73 Identities=12% Similarity=0.173 Sum_probs=45.5
Q ss_pred cCCCEEEEEeeecc-CC-CeEEEEeCCEEeeccCCCCCceEEEccCC-cEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGK-PE-PTIEWYKDGELVETSKSDAKSQRVILPTG-SLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+. |. |.+.|+|+|..+....... .......+ .......|..++.+|.|.|.|.+.|..+..
T Consensus 127 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~--~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 127 RTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTT--KPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp HTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCC--CCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred cCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecC--CceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 47889999999887 54 7999999998876321100 00000111 001112234447789999999999986553
No 402
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.58 E-value=1.3e-07 Score=57.47 Aligned_cols=81 Identities=22% Similarity=0.357 Sum_probs=50.9
Q ss_pred cCCCE-EEEEeee-ccCCCeEEEEeCCEEeeccCCCCCceEEEccCC--cEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 5 KNEPV-TLNCKAE-GKPEPTIEWYKDGELVETSKSDAKSQRVILPTG--SLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 5 ~G~~~-~l~C~~~-~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
.|+.+ .|.|.+. +.|.|.++|++++...... ........+ .......|......|.|.|.|.+.|..+..
T Consensus 129 ~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~-----~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~- 202 (221)
T 3eow_R 129 TGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT-----SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEK- 202 (221)
T ss_dssp CSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC-----EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSS-
T ss_pred CCceEEEEEEECCCccCCCeeEEEeCCCCCCcc-----ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCC-
Confidence 46667 5999987 8899999999875433211 000001111 122334456668899999999999987654
Q ss_pred eeeEEEEEEeeee
Q psy8666 81 SRNATLQVAVVIF 93 (124)
Q Consensus 81 ~~~~~l~v~~~~~ 93 (124)
...+.+...|.
T Consensus 203 --~~~~~v~~~~~ 213 (221)
T 3eow_R 203 --PQLLTVSLTVY 213 (221)
T ss_dssp --CEEEEECCCCC
T ss_pred --CeEEEEEEEEE
Confidence 45566655543
No 403
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.00 E-value=6.2e-09 Score=57.16 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=44.2
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCCE--Eeec----cC---CCCCceEEEccC-CcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDGE--LVET----SK---SDAKSQRVILPT-GSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g~--~~~~----~~---~~~~~~~~~~~~-~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+.+.+.+.|+|+.. .+.. .. .....+...... ........|.+++.+|.|.|.|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (110)
T 1u3h_A 10 TVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCA 89 (110)
Confidence 46789999999998877778899998642 1110 00 000111111110 11112234566699999999999
Q ss_pred eEeC
Q psy8666 72 ARNS 75 (124)
Q Consensus 72 ~~~~ 75 (124)
+.+.
T Consensus 90 ~~~~ 93 (110)
T 1u3h_A 90 ASAN 93 (110)
Confidence 8874
No 404
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.58 E-value=5.1e-07 Score=57.09 Aligned_cols=75 Identities=16% Similarity=0.279 Sum_probs=45.1
Q ss_pred CEEecCCCEEEEEeeecc--CCCeEEEEeCC--EEee---ccC-C--------CCCceEEEcc-CCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGK--PEPTIEWYKDG--ELVE---TSK-S--------DAKSQRVILP-TGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~~~---~~~-~--------~~~~~~~~~~-~~~~~~~~~i~~~~~~ 63 (124)
+.+.+|+.+.|.|.+.+. +.+.+.|||.. .... ... . ....+..... .........|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (280)
T 3fku_X 10 EVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSE 89 (280)
T ss_dssp CEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCST
T ss_pred EEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 457889999999998765 56789999742 1110 000 0 0001111110 1111233456888999
Q ss_pred CCeEEEEEeEeC
Q psy8666 64 DGGVYWCLARNS 75 (124)
Q Consensus 64 d~g~y~C~~~~~ 75 (124)
|.|.|.|.+.+.
T Consensus 90 DsG~Y~C~~~~~ 101 (280)
T 3fku_X 90 DTAVYYCARSPS 101 (280)
T ss_dssp TCEECCEEECSS
T ss_pred hCEEEEEEEecC
Confidence 999999999886
No 405
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.58 E-value=5.2e-08 Score=59.69 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=45.0
Q ss_pred cCCCEEEEEeeeccC-C-CeEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGKP-E-PTIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p-~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+.+ . +.+.|+|+|..+...... .......++. ......|...+..|.|.|.|.+.|.....
T Consensus 149 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 149 QANKATLVCLISDFFPGAVTVAWKADGAPVKAGVET--TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp TTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEE--CCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred cCCceEEEEEEEEEcCCceEEEEEECCEECCCCccc--cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 477899999998754 3 389999999877532000 0000001111 11223345557788999999999986553
No 406
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.57 E-value=8.3e-08 Score=58.07 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=47.3
Q ss_pred EecCCCEEEEEeeeccC---C-CeEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKNEPVTLNCKAEGKP---E-PTIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p---~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..|+.+.|.|.+.+.+ . +.+.|+|++..+..... ........+. ......|..++..|.|.|.|.+.+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~---~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~ 91 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQT---KPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAA 91 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEE---ECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTT
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCcccccccc---CCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccC
Confidence 45799999999998874 2 48999999976542100 0000011111 11233456667899999999999987
Q ss_pred ccc
Q psy8666 77 GTA 79 (124)
Q Consensus 77 ~~~ 79 (124)
+..
T Consensus 92 ~~~ 94 (207)
T 2vol_A 92 FPA 94 (207)
T ss_dssp CSS
T ss_pred CCC
Confidence 753
No 407
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.57 E-value=7.1e-08 Score=58.24 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=44.8
Q ss_pred cCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+. |.+ .+.|+|+|..+..... .........++. ......|..++..|.|.|.|.+.|....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 125 ATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVL-DSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEE-EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCce-EccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 47889999999874 554 7999999987653200 000000011222 1122344555778999999999997643
No 408
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.56 E-value=3.5e-06 Score=46.84 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=49.6
Q ss_pred EEecCCCEEEEEeeeccCC----CeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 2 VVAKNEPVTLNCKAEGKPE----PTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~----p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
.+..|++++|.| .. ... -.+.|+|+|...... ............|..++..|.|.|+|...+..+
T Consensus 19 vV~~G~~VTL~C-~~-~~~~~~~~~f~L~k~g~~~~~~---------~~~~~~~~a~f~i~~vt~~daG~Y~C~y~~~~~ 87 (118)
T 4ety_A 19 MISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFMEK---------STEPYKTEDEFEIGPVNETITGHYSCIYSKGIT 87 (118)
T ss_dssp EEETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEEE---------ECCSSSSEEEEEECSCCGGGCEEEEEEEEC---
T ss_pred cccCCCcEEEEE-CC-CCCCcccCEEEEEECCcCcccc---------ccCCCCcceEEEeCccCccCCeEEEEEeeCCCc
Confidence 356899999999 53 233 467899999754310 111111122334567799999999999877654
Q ss_pred -cceeeeEEEEEEee
Q psy8666 78 -TAVSRNATLQVAVV 91 (124)
Q Consensus 78 -~~~~~~~~l~v~~~ 91 (124)
+..+..+.|.|...
T Consensus 88 wS~~Sdpl~L~Vtg~ 102 (118)
T 4ety_A 88 WSERSKTLELKVIKE 102 (118)
T ss_dssp -CEECCCEEEEEECC
T ss_pred cccccCCEEEEEEEe
Confidence 33467778877664
No 409
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.56 E-value=1.5e-07 Score=52.60 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=47.5
Q ss_pred EEecCCCEEEEEeeeccCC---CeEEEEeCCEEe-----e--ccCCCC------CceEEEccC--CcEEEEEEEcCCCcc
Q psy8666 2 VVAKNEPVTLNCKAEGKPE---PTIEWYKDGELV-----E--TSKSDA------KSQRVILPT--GSLFFLRVVHGKKEQ 63 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~---p~v~w~k~g~~~-----~--~~~~~~------~~~~~~~~~--~~~~~~~~i~~~~~~ 63 (124)
.+..|+++.|.|...+.+. ..+.|+|..... . ...... ..+...... ........|.+++.+
T Consensus 11 tv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 90 (123)
T 4gjt_B 11 TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 90 (123)
T ss_dssp ECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSS
T ss_pred EEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChH
Confidence 5678999999999876543 347899854211 0 000000 001111100 000111345677999
Q ss_pred CCeEEEEEeEeC-CccceeeeEEEEEEe
Q psy8666 64 DGGVYWCLARNS-VGTAVSRNATLQVAV 90 (124)
Q Consensus 64 d~g~y~C~~~~~-~~~~~~~~~~l~v~~ 90 (124)
|.|.|.|.+.+. .|.. ...+.|.|..
T Consensus 91 DsG~Y~C~v~t~~~g~~-~~~~~L~VlE 117 (123)
T 4gjt_B 91 DEGEYECRVSTFPAGSF-QARLRLRVLE 117 (123)
T ss_dssp SCSEEEEEEEESSSCEE-EEEEEEEC--
T ss_pred HCEEEEEEEEECCCCeE-EeEEEEEEEE
Confidence 999999988764 4443 4566666643
No 410
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.55 E-value=1.9e-06 Score=48.89 Aligned_cols=91 Identities=19% Similarity=0.251 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeC--CEE--eec--c-C---CCCCceEEEc-cCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKD--GEL--VET--S-K---SDAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~--g~~--~~~--~-~---~~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...... ...+.|||. +.. +.. . . .....++... ..........|.+++.+|.|.|.
T Consensus 20 ~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 99 (134)
T 3bik_B 20 TVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYL 99 (134)
T ss_dssp EEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEEE
Confidence 577899999999987543 467999984 321 110 0 0 0011222221 11222334567888999999999
Q ss_pred EEeEeCCcc---ceeeeEEEEEEeee
Q psy8666 70 CLARNSVGT---AVSRNATLQVAVVI 92 (124)
Q Consensus 70 C~~~~~~~~---~~~~~~~l~v~~~~ 92 (124)
|.+.+.... .....+.|.|...+
T Consensus 100 C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 100 CGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp EEEEECSSSCEEEECCCEEEEEECCC
T ss_pred EEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 998875432 12345677775543
No 411
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.55 E-value=5e-07 Score=56.28 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=49.7
Q ss_pred EEecCCCEEEEEeee---ccCCCeEEEEeCCEEeeccC-----C--------CCCceEEEc-----cCCcEEEEEEEcCC
Q psy8666 2 VVAKNEPVTLNCKAE---GKPEPTIEWYKDGELVETSK-----S--------DAKSQRVIL-----PTGSLFFLRVVHGK 60 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~---~~p~p~v~w~k~g~~~~~~~-----~--------~~~~~~~~~-----~~~~~~~~~~i~~~ 60 (124)
.+.+|+.+.|.|.+. +.+.+.+.|+|++....... . ......... .+.. ..|.++
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~----L~I~~v 91 (268)
T 3mj6_A 16 RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS----LLLQDV 91 (268)
T ss_dssp EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC----EEECSC
T ss_pred EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE----EEECCC
Confidence 567899999999987 66777899998543211000 0 000111110 0122 346777
Q ss_pred CccCCeEEEEEeEeCCccc-eeeeEEEEE
Q psy8666 61 KEQDGGVYWCLARNSVGTA-VSRNATLQV 88 (124)
Q Consensus 61 ~~~d~g~y~C~~~~~~~~~-~~~~~~l~v 88 (124)
+.+|.|.|.|.+.+..+.. ....+.|.|
T Consensus 92 ~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V 120 (268)
T 3mj6_A 92 QKADEGIYTCEIRLKNESMVMKKPVELWV 120 (268)
T ss_dssp CGGGCEEEEEEEEETTCCCEEEEEEEEEE
T ss_pred CHhHCEEEEEEEEecCCcceEEEEEEEEE
Confidence 9999999999999875543 233444444
No 412
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.55 E-value=4.8e-08 Score=59.32 Aligned_cols=85 Identities=21% Similarity=0.305 Sum_probs=50.4
Q ss_pred CEEecCCCEEEEEeeeccCC-----CeEEEEeCCEEeeccCC--------CCCceEEEcc------CCcEEEEEEEcCCC
Q psy8666 1 MVVAKNEPVTLNCKAEGKPE-----PTIEWYKDGELVETSKS--------DAKSQRVILP------TGSLFFLRVVHGKK 61 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~-----p~v~w~k~g~~~~~~~~--------~~~~~~~~~~------~~~~~~~~~i~~~~ 61 (124)
+.+..|+.+.|.|.+.+.|. +.+.|++++........ ....+..... ...+ .|.+++
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL----~I~~v~ 80 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASL----RLQRVR 80 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCE----EECSCC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEE----EECCcc
Confidence 34678999999999887653 67999997643210000 0001111111 2233 456779
Q ss_pred ccCCeEEEEEeEeCCccceeeeEEEEEEee
Q psy8666 62 EQDGGVYWCLARNSVGTAVSRNATLQVAVV 91 (124)
Q Consensus 62 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~~ 91 (124)
..|.|.|.|.+.+.. .. +..+.|.|..+
T Consensus 81 ~~D~G~Y~C~~~~~~-~~-~~~~~l~V~~~ 108 (222)
T 4i0k_A 81 VTDEGSYTCFVSIQD-FD-SAAVSLQVAAP 108 (222)
T ss_dssp GGGCSCEEEEEEECC-CC-CCCCCCCCCBC
T ss_pred cccCEEEEEEEEeCC-Cc-eEEEEEEEEcC
Confidence 999999999999853 22 33445555443
No 413
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.55 E-value=2.6e-06 Score=48.95 Aligned_cols=87 Identities=17% Similarity=0.366 Sum_probs=52.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GEL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|++++|.|.....+...+.|||. +.. +... . .....++....... .....|.+++.+|.|.|.|.+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~-~~sL~I~~l~~~DsG~Y~C~~ 89 (143)
T 3u6r_L 11 SLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGT-DFTLTISNLEPEDFAVYYCQQ 89 (143)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCC-EEEEEEccCcccCCEEEEEEE
Confidence 567899999999988766778999984 221 1100 0 00111222211122 234457888999999999998
Q ss_pred EeCCccceeeeEEEEEEe
Q psy8666 73 RNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~~~~~~~~~~l~v~~ 90 (124)
.+.. ........|.|..
T Consensus 90 ~~~~-~~fg~gt~L~V~~ 106 (143)
T 3u6r_L 90 RSDW-VTFGGGTKVEIKA 106 (143)
T ss_dssp CSSB-CEECCCEEEEEC-
T ss_pred ecCC-CEECCCEEEEECC
Confidence 8754 3334456677754
No 414
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.55 E-value=1.7e-06 Score=48.29 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=44.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEeeccCCCCCceEEE-ccCCcEEEEEEEcCCCccCCeEEEEEeEe
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVETSKSDAKSQRVI-LPTGSLFFLRVVHGKKEQDGGVYWCLARN 74 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~d~g~y~C~~~~ 74 (124)
.+.+|+++.|.|...+.. .+.+.|||.. ....... ....+... ...........|.+++.+|.|.|.|.+..
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 11 TKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESI-SDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp EEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEE-CSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeE-ecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 577899999999987543 4578999853 2111000 00112211 11122234456788899999999999875
No 415
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.54 E-value=2.3e-06 Score=47.31 Aligned_cols=88 Identities=18% Similarity=0.265 Sum_probs=51.1
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeC--CE--Eeec--cC----CCCCceEEEcc-CCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKD--GE--LVET--SK----SDAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~--g~--~~~~--~~----~~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|...... ...+.|||. +. .+.. .. .....++.... .........|.+++.+|.|.|.
T Consensus 10 ~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 89 (117)
T 3bp6_A 10 TVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYL 89 (117)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEEEE
T ss_pred EEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEEEE
Confidence 577899999999987543 467999984 32 1110 00 00112222211 1222334567888999999999
Q ss_pred EEeEeCCccc---eeeeEEEEEE
Q psy8666 70 CLARNSVGTA---VSRNATLQVA 89 (124)
Q Consensus 70 C~~~~~~~~~---~~~~~~l~v~ 89 (124)
|.+.+..... .+..+.|.|.
T Consensus 90 C~~~~~~~~~~~~~~~~t~L~V~ 112 (117)
T 3bp6_A 90 CGAISLHPKLKIEESPGAELVVT 112 (117)
T ss_dssp EEEEECSSSCEEEECCCEEEEEC
T ss_pred EEEEecCCccccccCCcEEEEEE
Confidence 9988754321 2334555554
No 416
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.54 E-value=7.9e-08 Score=59.65 Aligned_cols=74 Identities=11% Similarity=0.147 Sum_probs=47.9
Q ss_pred EecCCCEEEEEeeecc---CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 3 VAKNEPVTLNCKAEGK---PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~---p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
+..|+.+.|.|.+.+. |.+ .+.|+|++..+..... ........+. ......|..++..|.|.|.|.+.+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~---~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~ 105 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQT---HAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGA 105 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEE---CCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCccc---ccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEeccc
Confidence 3579999999999877 766 8999998865432100 0001111111 12234455667889999999999987
Q ss_pred ccc
Q psy8666 77 GTA 79 (124)
Q Consensus 77 ~~~ 79 (124)
+..
T Consensus 106 ~~~ 108 (239)
T 1i1c_A 106 FPA 108 (239)
T ss_dssp SSS
T ss_pred CCC
Confidence 753
No 417
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.54 E-value=3.3e-06 Score=51.25 Aligned_cols=89 Identities=18% Similarity=0.318 Sum_probs=52.2
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe---e-ccC-------CCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV---E-TSK-------SDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~---~-~~~-------~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
+.+..|+.+.|.|.+.+.+ .+.+.|+|+. ... . ... .....+..... .........|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 3577899999999998764 5789999852 211 0 000 00111222211 11112234568889999
Q ss_pred CeEEEEEeEeCCcc--ceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGT--AVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~--~~~~~~~l~v~ 89 (124)
.|.|.|.+.+..+. .....+.|.|.
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~ 116 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVS 116 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEEC
T ss_pred CEEEEEEEecCCcccceEcCCEEEEec
Confidence 99999999986421 12234567775
No 418
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.54 E-value=2.3e-07 Score=54.70 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=40.2
Q ss_pred EEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 9 VTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 9 ~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|.|.+.+.|.|.+.|++++..+... .... +... ...|.|.|.|.+.|..+..
T Consensus 108 ~~L~C~~~~~p~p~i~W~~~~~~l~~~-----------~~~~--l~~~----~~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 108 ATLTCEVLEGTDVELKLYQGKEHLRSL-----------RQKT--MSYQ----WTNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp TEEEEECSSCSSCEEEEEETTEEEEEE-----------SSSE--EEEE----CSCCSSCEEEEEEETTEEE
T ss_pred cEEEEEeCCCCCcEEEEEECCEECcCC-----------cceE--EEEe----ccCCCceEEEEEEcccCcc
Confidence 478999988899999999999877631 1111 1122 4678899999999998775
No 419
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.54 E-value=2.8e-07 Score=55.02 Aligned_cols=58 Identities=19% Similarity=0.342 Sum_probs=42.3
Q ss_pred CCCEEEEEeeeccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccce
Q psy8666 6 NEPVTLNCKAEGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAV 80 (124)
Q Consensus 6 G~~~~l~C~~~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~ 80 (124)
+..+.|.|.+.+.|.|.+.|+++|..+.. ....+. ... ...|.|.|.|.+.|..+...
T Consensus 115 ~~~v~L~C~~~~~p~~~~~W~~~g~~l~~------------~~~~i~-~~~----~~~d~G~Y~C~a~N~~~~~~ 172 (182)
T 1hnf_A 115 CINTTLTCEVMNGTDPELNLYQDGKHLKL------------SQRVIT-HKW----TTSLSAKFKCTAGNKVSKES 172 (182)
T ss_dssp TTTTEEEEECSSCSSCEEEEEESSCEEEE------------ESSCEE-EEC----CSCEEEEEEEEEECSSCEEE
T ss_pred cCcEEEEeEccCCCCCEEEEEECCEECCC------------CCcEEE-Eec----ccCCCcEEEEEEEeCCCCcE
Confidence 34688999999888999999999987621 111121 111 46889999999999998763
No 420
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.53 E-value=1.4e-07 Score=57.12 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=44.6
Q ss_pred cCCCEEEEEeeec-cCCC-eEEEEeCCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEG-KPEP-TIEWYKDGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~-~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+ .|.| .+.|+|+|..+..... .........++.. .....|...+..|.|.|.|.+.|....
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ-ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE-EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEECCeecCCCee-EecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 3778999999987 4555 8999999987653200 0000000112221 122334455678899999999997644
No 421
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.53 E-value=5.9e-07 Score=49.35 Aligned_cols=70 Identities=17% Similarity=0.382 Sum_probs=41.8
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEE---eec-cCCCCC-------ceEEEc--cCCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GEL---VET-SKSDAK-------SQRVIL--PTGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~---~~~-~~~~~~-------~~~~~~--~~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+.+.|.|.....+.+.+.|||. +.. +.. ...... .+.... ....+ .|.+++.+|.|
T Consensus 12 ~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L----~I~~~~~~Dsg 87 (112)
T 1fo0_B 12 LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTEL----RLQVANMSQGR 87 (112)
T ss_dssp ECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEE----EEEEESCCSCE
T ss_pred EEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeE----EEcCCCHhHCE
Confidence 467899999999986666778999984 221 110 000000 111111 11133 34555999999
Q ss_pred EEEEEeEeC
Q psy8666 67 VYWCLARNS 75 (124)
Q Consensus 67 ~y~C~~~~~ 75 (124)
.|.|.+.+.
T Consensus 88 ~Y~C~~~~~ 96 (112)
T 1fo0_B 88 TLYCTCSAD 96 (112)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEEcC
Confidence 999998764
No 422
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.53 E-value=3.8e-06 Score=52.18 Aligned_cols=71 Identities=14% Similarity=0.301 Sum_probs=43.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEE--eeccCCCCC--------c-eEEEccCCc--EEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GEL--VETSKSDAK--------S-QRVILPTGS--LFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~--~~~~~~~~~--------~-~~~~~~~~~--~~~~~~i~~~~~~d~g 66 (124)
.+..|+.+.|.|...+.+.+.+.|||. +.. +........ . +........ +.+ .+++.+|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I----~~v~~~DsG 87 (253)
T 3to4_D 12 LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRL----QVANMSQGR 87 (253)
T ss_dssp EEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEE----EEESCSSCE
T ss_pred EEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEE----ccCChhhCe
Confidence 467899999999988888899999982 211 110000000 0 111111111 443 444999999
Q ss_pred EEEEEeEeCC
Q psy8666 67 VYWCLARNSV 76 (124)
Q Consensus 67 ~y~C~~~~~~ 76 (124)
.|.|.+.+..
T Consensus 88 ~Y~C~~~~~~ 97 (253)
T 3to4_D 88 TLYCTSSADH 97 (253)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEecCC
Confidence 9999998653
No 423
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.52 E-value=1.8e-07 Score=57.89 Aligned_cols=84 Identities=21% Similarity=0.354 Sum_probs=45.3
Q ss_pred cCCCEEEEEeeec-cCCC-eEEEEeCCEEeeccCC-CCC---ceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCC
Q psy8666 5 KNEPVTLNCKAEG-KPEP-TIEWYKDGELVETSKS-DAK---SQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSV 76 (124)
Q Consensus 5 ~G~~~~l~C~~~~-~p~p-~v~w~k~g~~~~~~~~-~~~---~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~ 76 (124)
.|+.+.|.|.+.+ .|.| .+.|+++|..+..... ... ........+... ....+......|.|.|.|.+.|..
T Consensus 132 ~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~ 211 (248)
T 3pv7_A 132 KENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHAS 211 (248)
T ss_dssp ----CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTT
T ss_pred cCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCC
Confidence 4667789999988 7888 9999999864321100 000 011112222222 223344556778899999999987
Q ss_pred ccc-eeeeEEEEE
Q psy8666 77 GTA-VSRNATLQV 88 (124)
Q Consensus 77 ~~~-~~~~~~l~v 88 (124)
+.. ....+.|.|
T Consensus 212 ~~~~~~~~v~l~V 224 (248)
T 3pv7_A 212 LHTPLRSNFTLTA 224 (248)
T ss_dssp CSSCEEEEECC--
T ss_pred CCCCcEEEEEEEE
Confidence 753 244555555
No 424
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.52 E-value=3.4e-07 Score=57.41 Aligned_cols=88 Identities=16% Similarity=0.303 Sum_probs=50.5
Q ss_pred EEecCCCEEEEEeeeccC-----CCeEEEEeCC--EE---eeccC----CCCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-----EPTIEWYKDG--EL---VETSK----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-----~p~v~w~k~g--~~---~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|+. .. +.... .....+......... ....|.+++.+|.|.
T Consensus 26 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~ 104 (268)
T 1x9q_A 26 PVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTD-FTLKINRVEAEDLGV 104 (268)
T ss_dssp CCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE-EEEEESSCCGGGCEE
T ss_pred EecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCE-EEEEECCCChhHCEE
Confidence 356899999999998776 4789999852 21 11000 000111111111111 234568889999999
Q ss_pred EEEEeEeCCccceeeeEEEEEEe
Q psy8666 68 YWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 68 y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.|.+.+..+........|.|..
T Consensus 105 Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 105 YFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp EEEEECSSSSCEECCCEEEC---
T ss_pred EEEEEecCCCceEcCCEEEEEcc
Confidence 99999987543323345566554
No 425
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.52 E-value=4e-07 Score=60.86 Aligned_cols=73 Identities=12% Similarity=0.138 Sum_probs=49.1
Q ss_pred ecCCCEEEEEeeeccC----CCeEEEEeCCEEeeccCCCCCceEEEccCC--cEEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 4 AKNEPVTLNCKAEGKP----EPTIEWYKDGELVETSKSDAKSQRVILPTG--SLFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p----~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
..|+.+.|.|.+.+.+ .+.+.|+|++..+.... .........+ .......|..++..|.|.|.|.+.|..+
T Consensus 253 ~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~---~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 329 (444)
T 1igt_B 253 MISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ---TQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDL 329 (444)
T ss_dssp CTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTT---CBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTC
T ss_pred ecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcc---cccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCC
Confidence 5699999999998874 35899999998765321 0111111122 1222345566688999999999999887
Q ss_pred cc
Q psy8666 78 TA 79 (124)
Q Consensus 78 ~~ 79 (124)
..
T Consensus 330 ~~ 331 (444)
T 1igt_B 330 PA 331 (444)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 426
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.52 E-value=6.5e-06 Score=45.82 Aligned_cols=87 Identities=17% Similarity=0.291 Sum_probs=49.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--E---Eee-ccCCC------CCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--E---LVE-TSKSD------AKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~---~~~-~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+++.|.|... .....+.|||.. . .+. ..... ...+..............|.+++.+|.|.|.
T Consensus 12 ~v~~G~~vtL~C~~~-~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 90 (121)
T 2oi9_C 12 VAVTGEKVTLSCNQT-NNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESATPSQTSVYF 90 (121)
T ss_dssp EEETTCCEEEEEEES-SCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSCCGGGCEEEE
T ss_pred EecCCCcEEEEEEec-CCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCCCHHHCEEEE
Confidence 577899999999964 345679999842 1 111 10000 0112222222222344567888999999999
Q ss_pred EEeEeCCccceeeeEEEEEE
Q psy8666 70 CLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~ 89 (124)
|.+.+...........|.|.
T Consensus 91 C~~~~~~~~~fg~GT~l~v~ 110 (121)
T 2oi9_C 91 CASGGGGTLYFGAGTRLSVL 110 (121)
T ss_dssp EEEESSSCEEECCCEEEEEE
T ss_pred EEEccCCccEECCCeEEEEe
Confidence 99876432222334455543
No 427
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.52 E-value=3.7e-06 Score=51.31 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=52.3
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe--ecc--C--------CCCCceEEEcc-CCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV--ETS--K--------SDAKSQRVILP-TGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~--~~~--~--------~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 63 (124)
+.+.+|+.+.|.|.+.+.+ .+.+.|||+. ... ... . .....+..... .........|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 10 GVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 4578899999999998765 4789999843 211 100 0 00011222111 1111223456888999
Q ss_pred CCeEEEEEeEeCCc----c-ceeeeEEEEEE
Q psy8666 64 DGGVYWCLARNSVG----T-AVSRNATLQVA 89 (124)
Q Consensus 64 d~g~y~C~~~~~~~----~-~~~~~~~l~v~ 89 (124)
|.|.|.|.+.+..+ . .....+.|.|.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~ 120 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVS 120 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEEC
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEc
Confidence 99999999998642 1 11234567776
No 428
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.52 E-value=3.3e-06 Score=51.67 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=47.3
Q ss_pred CEEecCCCEEEEEeeeccCC----CeEEEEeC--CEEe---eccCC--------CCCceEEEcc-CCcEEEEEEEcCCCc
Q psy8666 1 MVVAKNEPVTLNCKAEGKPE----PTIEWYKD--GELV---ETSKS--------DAKSQRVILP-TGSLFFLRVVHGKKE 62 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~----p~v~w~k~--g~~~---~~~~~--------~~~~~~~~~~-~~~~~~~~~i~~~~~ 62 (124)
+.+..|+.+.|.|.+.+.|. +.+.|+|+ +..+ ..... ....+..... .........|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 10 GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT 89 (228)
T ss_dssp SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence 35778999999999988764 88999984 2221 10000 0011222111 111113345688899
Q ss_pred cCCeEEEEEeEeCCc
Q psy8666 63 QDGGVYWCLARNSVG 77 (124)
Q Consensus 63 ~d~g~y~C~~~~~~~ 77 (124)
+|.|.|.|.+.+..+
T Consensus 90 ~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 90 ADTATYYCARRGFYG 104 (228)
T ss_dssp GGCEEEEEEEEEEST
T ss_pred ccCEEEEEEEecCCC
Confidence 999999999998654
No 429
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.51 E-value=3.8e-06 Score=46.86 Aligned_cols=87 Identities=22% Similarity=0.376 Sum_probs=49.6
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCCE-----Eeec-cCC---CCCceEEEc-cCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDGE-----LVET-SKS---DAKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g~-----~~~~-~~~---~~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+++.|.|..... ....+.|||... .+.. ... ....+.... ..........|.+++.+|.|.|.
T Consensus 21 ~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~ 100 (122)
T 1hkf_A 21 QSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYW 100 (122)
T ss_dssp EECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEE
Confidence 56789999999997643 235789998532 1211 110 011222221 11222334567888999999999
Q ss_pred EEeEeCCccceeeeEEEEE
Q psy8666 70 CLARNSVGTAVSRNATLQV 88 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v 88 (124)
|...............|.+
T Consensus 101 C~v~~~~~~~~~~~~~l~L 119 (122)
T 1hkf_A 101 CRIYRPSDNSVSKSVRFYL 119 (122)
T ss_dssp EEEECTTTCCEEEEEEEEE
T ss_pred EEEEcCCCCcccccEEEEE
Confidence 9988754333233344433
No 430
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.51 E-value=1.2e-06 Score=48.00 Aligned_cols=72 Identities=18% Similarity=0.306 Sum_probs=43.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eec-cCCCC---CceEEEc-cCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VET-SKSDA---KSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~-~~~~~---~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+.+.+.+.|||.. .. +.. ..... ..+.... ..........|.+++.+|.|.|.|.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 90 (112)
T 2z35_A 11 ALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCA 90 (112)
T ss_dssp EEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEE
Confidence 5778999999999877677889999843 11 110 00000 0111111 1111112245678899999999999
Q ss_pred eE
Q psy8666 72 AR 73 (124)
Q Consensus 72 ~~ 73 (124)
+.
T Consensus 91 ~~ 92 (112)
T 2z35_A 91 LS 92 (112)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 431
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.51 E-value=4e-06 Score=51.43 Aligned_cols=73 Identities=22% Similarity=0.332 Sum_probs=43.8
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeecc--CC----------CCCceEEEc-cCCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVETS--KS----------DAKSQRVIL-PTGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~~--~~----------~~~~~~~~~-~~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.| .+.+.|+|+ +..+... .. ....+.... ..........|.+++.+|
T Consensus 130 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 209 (240)
T 1moe_A 130 LVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSED 209 (240)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHH
Confidence 356799999999998876 358999995 3221100 00 000111111 111112334568889999
Q ss_pred CeEEEEEeEe
Q psy8666 65 GGVYWCLARN 74 (124)
Q Consensus 65 ~g~y~C~~~~ 74 (124)
.|.|.|.+.+
T Consensus 210 ~G~Y~C~a~~ 219 (240)
T 1moe_A 210 TAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEEe
Confidence 9999999984
No 432
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.51 E-value=1.2e-07 Score=57.68 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=45.9
Q ss_pred ecCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+.+. |.| .+.|+++|..+... ........+.. .....|...+..| |.|.|.+.|..+..
T Consensus 140 ~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~-----~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~ 213 (222)
T 1q9r_B 140 QTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH-----TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 213 (222)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE-----EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred cCCCcEEEEEEEccEECCCCEEEEecCCeEcceE-----eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCC
Confidence 368889999999886 888 99999998654210 01111122211 1223445556778 99999999988764
No 433
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.50 E-value=1.6e-06 Score=47.75 Aligned_cols=74 Identities=18% Similarity=0.305 Sum_probs=45.0
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeC--CEE---eec-cC-----C--CCCceEEEccCCcEEEEEEEcCCCccCCeE
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKD--GEL---VET-SK-----S--DAKSQRVILPTGSLFFLRVVHGKKEQDGGV 67 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~--g~~---~~~-~~-----~--~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~ 67 (124)
.+.+|+++.|.|...+. +.+.+.|||. +.. +.. .. . ....+........ .....|.+++.+|.|.
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~-~~~L~I~~~~~~Dsg~ 90 (115)
T 2otu_A 12 SFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGA-DRYLSISNIQPEDEAI 90 (115)
T ss_dssp ECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETT-EEEEEESSCCGGGCEE
T ss_pred EECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCC-EEEEEECCCChhHCEE
Confidence 46789999999998765 5678999983 221 110 00 0 0011121111111 2345578889999999
Q ss_pred EEEEeEeCC
Q psy8666 68 YWCLARNSV 76 (124)
Q Consensus 68 y~C~~~~~~ 76 (124)
|.|.+.+..
T Consensus 91 Y~C~~~~~~ 99 (115)
T 2otu_A 91 YICGVGDTI 99 (115)
T ss_dssp EEEEEEECC
T ss_pred EEEEEecCC
Confidence 999988743
No 434
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.50 E-value=2e-07 Score=60.13 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=52.6
Q ss_pred EecCCCEEEEEeeeccC-CCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCcccee
Q psy8666 3 VAKNEPVTLNCKAEGKP-EPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTAVS 81 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p-~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~~~ 81 (124)
+..|+++.|.|.+.+.+ .+.+.|++++..+... ........+.+ .|..++..|.|.|.|.. .|.. .
T Consensus 18 ~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~-----~~~~~~~~~~L----~i~~v~~~d~G~Y~C~~---~g~~-~ 84 (325)
T 1n26_A 18 SLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-----PSRWAGMGRRL----LLRSVQLHDSGNYSCYR---AGRP-A 84 (325)
T ss_dssp ECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCC-----CEEEEEESSEE----EECSCCGGGCEEEEEES---SSSC-S
T ss_pred CCCCCcEEEEeCCCCCCCCceEEEEECCccCCcc-----ccccccccceE----EecccchhhCeEeEEEe---CCEE-e
Confidence 35899999999987654 7899999977654211 11122233333 35666899999999993 5555 4
Q ss_pred eeEEEEEEeeee
Q psy8666 82 RNATLQVAVVIF 93 (124)
Q Consensus 82 ~~~~l~v~~~~~ 93 (124)
..+.|.|..+|.
T Consensus 85 ~~~~L~V~~pP~ 96 (325)
T 1n26_A 85 GTVHLLVDVPPE 96 (325)
T ss_dssp CEEEEEECCCCC
T ss_pred eeEEEEeccCCC
Confidence 567888877654
No 435
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.50 E-value=7.2e-08 Score=58.22 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=43.2
Q ss_pred cCCCEEEEEeeec-cCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeE
Q psy8666 5 KNEPVTLNCKAEG-KPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLAR 73 (124)
Q Consensus 5 ~G~~~~l~C~~~~-~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~ 73 (124)
.|+.+.|.|.+.+ .|.|.+.|+|+|..+...... .........+... ....|..++..|.|.|.|.+.
T Consensus 128 ~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 128 ATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIEN-SKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEE-EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCcEeEEEEEecccCCcEEEEEeCCccCCCCeec-ccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 4889999999988 899999999999876521000 0000001112211 223345557889999999998
No 436
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.50 E-value=1.8e-06 Score=53.76 Aligned_cols=88 Identities=17% Similarity=0.323 Sum_probs=50.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEee--cc--CCC------CCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELVE--TS--KSD------AKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~~--~~--~~~------~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+..|+.+.|.|.+.+. .|.+.|+|+. .... .. ... ...++.............|.+++.+|.|.|.
T Consensus 148 ~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 226 (256)
T 3tf7_C 148 VTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYF 226 (256)
T ss_dssp EEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEE
T ss_pred EEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEE
Confidence 35689999999999876 7789999832 1111 00 000 0001111111111123456788999999999
Q ss_pred EEeEeCCccc-eeeeEEEEEEe
Q psy8666 70 CLARNSVGTA-VSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~~~-~~~~~~l~v~~ 90 (124)
|.+.|..|.. ......|.|..
T Consensus 227 C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 227 CASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp EEEEEETTEEEECCCEEEEEEC
T ss_pred EEecCCCCccEECCCeEEEEEc
Confidence 9999876542 33445566543
No 437
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.49 E-value=4.1e-06 Score=52.47 Aligned_cols=88 Identities=13% Similarity=0.220 Sum_probs=49.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccCCCCC--------c-eEEEccCCcEEEEEEEcCCCccCCeEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSKSDAK--------S-QRVILPTGSLFFLRVVHGKKEQDGGVY 68 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~~~~~--------~-~~~~~~~~~~~~~~~i~~~~~~d~g~y 68 (124)
.+..|+.+.|.|.+.+ +.+.+.|||. +.... ....... . +..............|.+++.+|.|.|
T Consensus 38 ~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 116 (270)
T 3qib_D 38 VKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALY 116 (270)
T ss_dssp EEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEE
T ss_pred EEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEE
Confidence 4678999999999865 7789999982 21110 0000000 0 111111111122345688899999999
Q ss_pred EEEeEeCCc---cceeeeEEEEEEe
Q psy8666 69 WCLARNSVG---TAVSRNATLQVAV 90 (124)
Q Consensus 69 ~C~~~~~~~---~~~~~~~~l~v~~ 90 (124)
.|.+.+... ........|.|..
T Consensus 117 ~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 117 LCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp EEEEESCTTCCCCEECCCEEEEEES
T ss_pred EEEEecCCCccceEECCcEEEEEcc
Confidence 999986321 1123345666654
No 438
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.48 E-value=3.4e-06 Score=56.38 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=52.4
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeC--CEEee--ccCC----------CCCceEEEcc-CCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVE--TSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~--~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~ 63 (124)
+.+..|+.+.|.|.+.+.+ .+.+.|||+ +..+. .... ....+..... .........|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (444)
T 1igt_B 10 GLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSE 89 (444)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHH
Confidence 3577899999999998764 578999985 32211 0000 0001111111 1111123456788999
Q ss_pred CCeEEEEEeEeCCcc--ceeeeEEEEEE
Q psy8666 64 DGGVYWCLARNSVGT--AVSRNATLQVA 89 (124)
Q Consensus 64 d~g~y~C~~~~~~~~--~~~~~~~l~v~ 89 (124)
|.|.|.|.+.+..+. .......|.|.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 117 (444)
T 1igt_B 90 DTAMYYCARHGGYYAMDYWGQGTTVTVS 117 (444)
T ss_dssp GCEEEEEEEECSSSCEEEEBCCEEEEEC
T ss_pred HCEEEEEEEecCCcccccccCcEEEEec
Confidence 999999999987543 22334566665
No 439
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.48 E-value=3.6e-06 Score=52.83 Aligned_cols=89 Identities=21% Similarity=0.273 Sum_probs=52.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--ccCCC----------CCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--TSKSD----------AKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~~~~~----------~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||+. ..+. ..... ...+...... ........|.+++.+|
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 96 (261)
T 2xqy_G 17 LVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSED 96 (261)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCccc
Confidence 467899999999998766 6789999863 2211 00000 0011111110 1112234568889999
Q ss_pred CeEEEEEeEeCCcc--ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVGT--AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~~--~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+..+. .....+.|.|..
T Consensus 97 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 97 SAVYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp CEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred CeEEEEEEecCCCcceEECCCEEEEEcc
Confidence 99999999985421 112345666654
No 440
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.48 E-value=2.5e-06 Score=46.92 Aligned_cols=73 Identities=21% Similarity=0.420 Sum_probs=43.8
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCCE-----E---eec-cC--------CCCCceEEEcc--CCcEEEEEEEcCCC
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDGE-----L---VET-SK--------SDAKSQRVILP--TGSLFFLRVVHGKK 61 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g~-----~---~~~-~~--------~~~~~~~~~~~--~~~~~~~~~i~~~~ 61 (124)
.+.+|+++.|.|...+. +...+.|||... . +.. .. .....+..... .... ....|.+++
T Consensus 9 ~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~-~~L~I~~~~ 87 (115)
T 2atp_B 9 LVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRR-PFLSIMNVK 87 (115)
T ss_dssp EECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSS-CEEEECSCC
T ss_pred EEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCE-EEEEECCCC
Confidence 57789999999998754 466799998542 1 110 00 00011222211 1111 234567889
Q ss_pred ccCCeEEEEEeEeC
Q psy8666 62 EQDGGVYWCLARNS 75 (124)
Q Consensus 62 ~~d~g~y~C~~~~~ 75 (124)
.+|.|.|.|.+...
T Consensus 88 ~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 88 PEDSDFYFCATVGS 101 (115)
T ss_dssp GGGCEEEEEEEECS
T ss_pred HHHCEEEEEeEccC
Confidence 99999999988753
No 441
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.47 E-value=5.5e-06 Score=46.37 Aligned_cols=88 Identities=18% Similarity=0.247 Sum_probs=49.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEE--eeccC-C-C------CCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GEL--VETSK-S-D------AKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~--~~~~~-~-~------~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+++.|.|.........+.|||. +.. +.... . . ...+..............|.+++.+|.|.|.
T Consensus 16 ~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 95 (125)
T 3r8b_B 16 VAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 95 (125)
T ss_dssp EEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTCCGGGCEEEE
T ss_pred EEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCCChhhCEEEE
Confidence 467899999999987655558999984 221 11100 0 0 0011111111112344567888999999999
Q ss_pred EEeEeCCccceeeeEEEEEE
Q psy8666 70 CLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~ 89 (124)
|.+...........+.|.|.
T Consensus 96 C~~~~~~~~~fg~GT~l~V~ 115 (125)
T 3r8b_B 96 CASGGGGTLYFGAGTRLSVL 115 (125)
T ss_dssp EEEEETTEEEECCCEEEEEE
T ss_pred EEEcCCCCcEECCCEEEEEe
Confidence 98876432222334455554
No 442
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.47 E-value=6.1e-06 Score=45.38 Aligned_cols=73 Identities=22% Similarity=0.347 Sum_probs=44.2
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeCC--EE---ee-ccCCC------CCceEEEcc--CCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKDG--EL---VE-TSKSD------AKSQRVILP--TGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~g--~~---~~-~~~~~------~~~~~~~~~--~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+++.|.|..... +.+.+.|||.. .. +. ..... ...+..... ... .....|.+++.+|.|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~-~~~L~I~~~~~~DsG 89 (116)
T 1tvd_A 11 TVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQK-AFHLVISPVRTEDSA 89 (116)
T ss_dssp EEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGT-EEEEEESSCCGGGCE
T ss_pred EEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCC-EEEEEEccCChHHCE
Confidence 57789999999998754 56679999843 21 11 00000 011111111 111 223457888999999
Q ss_pred EEEEEeEeC
Q psy8666 67 VYWCLARNS 75 (124)
Q Consensus 67 ~y~C~~~~~ 75 (124)
.|.|.+.+.
T Consensus 90 ~Y~C~~~~~ 98 (116)
T 1tvd_A 90 TYYCAFTLP 98 (116)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEeCC
Confidence 999999873
No 443
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.47 E-value=1.9e-06 Score=48.98 Aligned_cols=88 Identities=17% Similarity=0.247 Sum_probs=50.3
Q ss_pred EEecCCCEEEEEeeeccC---CCeEEEEeCC--EEe--eccC-----CCCCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP---EPTIEWYKDG--ELV--ETSK-----SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p---~p~v~w~k~g--~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+++.|.|.....+ .+.+.|||.. ..+ .... .....+........ .....|.+++.+|.|.|.
T Consensus 16 ~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~-~~sL~I~~v~~~DsG~Y~ 94 (135)
T 1p4b_L 16 TTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGD-KAALTITGAQTEDEAIYF 94 (135)
T ss_dssp EECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETT-EEEEEEESCCGGGCEEEE
T ss_pred EEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCC-EEEEEECCCChhHCEEEE
Confidence 577899999999987654 4679999842 111 1000 00011221111111 234456888999999999
Q ss_pred EEeEeCCccceeeeEEEEEEe
Q psy8666 70 CLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~~~~~~~~~l~v~~ 90 (124)
|.+.+.........+.|.|..
T Consensus 95 C~~~~~~~~~fg~GT~L~V~~ 115 (135)
T 1p4b_L 95 CALWYSNHWVFGGGTKLTVLG 115 (135)
T ss_dssp EEEECSSCEEECCCEEEEEC-
T ss_pred EEEecCCCCEECCCEEEEEEc
Confidence 998875332223345555543
No 444
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.47 E-value=3.9e-06 Score=50.80 Aligned_cols=89 Identities=16% Similarity=0.250 Sum_probs=49.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---ee-ccCCCC--CceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VE-TSKSDA--KSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~-~~~~~~--~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|...+.....+.|||.. .. +. ...... ..+.... ..........|.+++.+|.|.|.|.+
T Consensus 10 ~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~ 89 (200)
T 2nw2_A 10 TATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAV 89 (200)
T ss_dssp EEETTCCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEccCCCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCcEEEEE
Confidence 5789999999999876556689999843 21 11 000000 1111111 11112234557888999999999998
Q ss_pred EeC---CccceeeeEEEEEEe
Q psy8666 73 RNS---VGTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~---~~~~~~~~~~l~v~~ 90 (124)
.+. ..........|.|..
T Consensus 90 ~~~~~~~~~~fg~gt~L~V~~ 110 (200)
T 2nw2_A 90 QASGGSYIPTFGRGTSLIVHP 110 (200)
T ss_dssp C---CCCCCEECCCEEEEEEC
T ss_pred EcCCcceeeeeCCCEEEEEec
Confidence 751 111122345666654
No 445
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.47 E-value=7.9e-06 Score=45.34 Aligned_cols=74 Identities=18% Similarity=0.333 Sum_probs=44.5
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--E--E-eec-cC-C------CCCceEEEccC-CcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--E--L-VET-SK-S------DAKSQRVILPT-GSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~--~-~~~-~~-~------~~~~~~~~~~~-~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|...+.+ ...+.|||.. . . +.. .. . ....+.....+ ........|.+++.+|.
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 90 (121)
T 1kxv_C 11 TVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDDT 90 (121)
T ss_dssp EECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHC
Confidence 567899999999987543 4578999842 2 1 110 00 0 00112222211 12223455788899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (121)
T 1kxv_C 91 AMYYCKPSLR 100 (121)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEEEEec
Confidence 9999998875
No 446
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.47 E-value=7.6e-06 Score=54.92 Aligned_cols=76 Identities=18% Similarity=0.338 Sum_probs=46.7
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEee----c--c------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVE----T--S------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~----~--~------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||+ +.... . . ......+..... .........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (457)
T 1hzh_H 11 VKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSAD 90 (457)
T ss_dssp EECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCccc
Confidence 467899999999998776 678999984 32111 0 0 000011211111 11111234568889999
Q ss_pred CeEEEEEeEeCCc
Q psy8666 65 GGVYWCLARNSVG 77 (124)
Q Consensus 65 ~g~y~C~~~~~~~ 77 (124)
.|.|.|.+.|..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (457)
T 1hzh_H 91 TAVYYCARVGPYS 103 (457)
T ss_dssp CEEEEEEECCCCC
T ss_pred CEEEEEEEecCCc
Confidence 9999999998764
No 447
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.46 E-value=9.3e-06 Score=45.16 Aligned_cols=74 Identities=19% Similarity=0.386 Sum_probs=45.1
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCCE--E---eec-cCC--------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDGE--L---VET-SKS--------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g~--~---~~~-~~~--------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.. ...+.|||... . +.. ... ....+..... .........|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (123)
T 2wzp_D 11 LVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPED 90 (123)
T ss_dssp EEETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCCHHH
Confidence 577899999999987533 45789998531 1 110 000 0011222211 12233455678889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (123)
T 2wzp_D 91 TAIYYCAARSG 101 (123)
T ss_dssp CEEEEEEEEES
T ss_pred CEEEEEEEecC
Confidence 99999998875
No 448
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.46 E-value=3.8e-06 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.284 Sum_probs=51.3
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---eec--cCCC--CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VET--SKSD--AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~~--~~~~--~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+...+.+.|||.. .. +.. .... ...+.... ..........|.+++.+|.|.|.|.
T Consensus 14 ~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~ 93 (210)
T 2eys_A 14 IILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICV 93 (210)
T ss_dssp EEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEE
T ss_pred EEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEE
Confidence 5778999999999877666789999842 21 111 1000 01111111 1111223456788899999999999
Q ss_pred eEeCC---c-cceeeeEEEEEEe
Q psy8666 72 ARNSV---G-TAVSRNATLQVAV 90 (124)
Q Consensus 72 ~~~~~---~-~~~~~~~~l~v~~ 90 (124)
+.+.. . ........|.|..
T Consensus 94 ~~~~~~~~~~~~fg~gt~L~V~~ 116 (210)
T 2eys_A 94 VSDRGSTLGRLYFGRGTQLTVWP 116 (210)
T ss_dssp EESCSSTTCCEEECCCEEEEEEC
T ss_pred EEccCCCcccceECCCEEEEEEC
Confidence 88732 1 1122345666653
No 449
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.46 E-value=1.2e-06 Score=49.41 Aligned_cols=91 Identities=13% Similarity=0.183 Sum_probs=50.0
Q ss_pred EEecCCCEEEEEeeec-------cCCCeEEEEeCCEE------eeccCC------CCCceEEEccCC-cEEEEEEEcCCC
Q psy8666 2 VVAKNEPVTLNCKAEG-------KPEPTIEWYKDGEL------VETSKS------DAKSQRVILPTG-SLFFLRVVHGKK 61 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-------~p~p~v~w~k~g~~------~~~~~~------~~~~~~~~~~~~-~~~~~~~i~~~~ 61 (124)
.+..|+.+.|.|.... ...+.+.|||.... +..... ....+.....+. .......|.+++
T Consensus 17 ~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 96 (132)
T 1nko_A 17 TVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDAR 96 (132)
T ss_dssp EEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccC
Confidence 5678999999999862 34578999986542 111100 001122222110 111123567789
Q ss_pred ccCCeEEEEEeEeCCccc-e-eeeEEEEEEeee
Q psy8666 62 EQDGGVYWCLARNSVGTA-V-SRNATLQVAVVI 92 (124)
Q Consensus 62 ~~d~g~y~C~~~~~~~~~-~-~~~~~l~v~~~~ 92 (124)
.+|.|.|.|.+.+..... . ...+.|.|..++
T Consensus 97 ~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~ 129 (132)
T 1nko_A 97 MSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALT 129 (132)
T ss_dssp GGGCEEEEEEEEETTEEEECTTSCEEEEEECCC
T ss_pred cccCeeEEEEEEcCCCcccccCCceEEEecccC
Confidence 999999999988753111 1 234566665443
No 450
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.45 E-value=1.4e-07 Score=57.81 Aligned_cols=75 Identities=13% Similarity=0.238 Sum_probs=45.1
Q ss_pred EEecCCCEEEEEeeeccC-CC-eEEEEeCC--EEe---ecc--CC--CCCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EP-TIEWYKDG--ELV---ETS--KS--DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p-~v~w~k~g--~~~---~~~--~~--~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... ... .. ....+......... ....|.+++.+|.|.|.|
T Consensus 30 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~D~G~Y~C 108 (234)
T 2j6e_L 30 SGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTS-ASLAISGLRSEDEADYYC 108 (234)
T ss_dssp CBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTE-EEEEEESCCSTTCSEEEE
T ss_pred EeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCe-EEEEECCCCHHHCEEEEE
Confidence 457899999999998754 34 69999863 221 100 00 00111111111111 233467779999999999
Q ss_pred EeEeCCc
Q psy8666 71 LARNSVG 77 (124)
Q Consensus 71 ~~~~~~~ 77 (124)
.+.+..+
T Consensus 109 ~~~~~~~ 115 (234)
T 2j6e_L 109 ATWDDSL 115 (234)
T ss_dssp EEEETTT
T ss_pred EEEcCCc
Confidence 9999876
No 451
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.45 E-value=2.8e-06 Score=53.25 Aligned_cols=73 Identities=16% Similarity=0.301 Sum_probs=43.8
Q ss_pred EecCCCEEEEEeeeccCC--CeEEEEeC--CEEee--ccC------------CCCCceEEEcc-CCcEEEEEEEcCCCcc
Q psy8666 3 VAKNEPVTLNCKAEGKPE--PTIEWYKD--GELVE--TSK------------SDAKSQRVILP-TGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~--p~v~w~k~--g~~~~--~~~------------~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 63 (124)
+.+|+.+.|.|.+.+.+. +.+.|+|+ +..+. ... .....+..... .........|.+++.+
T Consensus 163 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 242 (268)
T 1x9q_A 163 VQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVE 242 (268)
T ss_dssp ECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred ecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHH
Confidence 567999999999987653 78999985 32211 000 00011111111 1111123456788999
Q ss_pred CCeEEEEEeEeC
Q psy8666 64 DGGVYWCLARNS 75 (124)
Q Consensus 64 d~g~y~C~~~~~ 75 (124)
|.|.|.|.+.+.
T Consensus 243 DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 243 DTGIYYCTGASY 254 (268)
T ss_dssp GCEEEEEEEEET
T ss_pred HCEEEEEEEccC
Confidence 999999999874
No 452
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.45 E-value=5.9e-06 Score=51.03 Aligned_cols=89 Identities=16% Similarity=0.286 Sum_probs=52.0
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EEe---e-ccC-------CC-CCceEEEc-cCCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--ELV---E-TSK-------SD-AKSQRVIL-PTGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~~---~-~~~-------~~-~~~~~~~~-~~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+. +.+.+.|||+. ..+ . ... .. ...+.... ..........|.+++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 91 (242)
T 1hxm_B 12 TKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQD 91 (242)
T ss_dssp EEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCccc
Confidence 56789999999998875 56789999842 211 1 000 00 11122111 111112234567889999
Q ss_pred CeEEEEEeEeCCc------cceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSVG------TAVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~~------~~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+... ........|.|..
T Consensus 92 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (242)
T 1hxm_B 92 IATYYCALWEAQQELGKKIKVFGPGTKLIITD 123 (242)
T ss_dssp CEEEEEEEEEECSSTTCEEEEECCCEEEEEES
T ss_pred CEEEEEeeecCCccccccceeEcCcEEEEEcc
Confidence 9999999988531 1122345777765
No 453
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.45 E-value=1.5e-05 Score=48.97 Aligned_cols=90 Identities=18% Similarity=0.273 Sum_probs=51.2
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-ccC-------CCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TSK-------SDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~~-------~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
+.+..|+.+.|.|.+.+.+ .+.+.|||+. .. +. ... .....+..... .........|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 3577899999999998764 5789999842 21 11 000 00011222111 11112234568889999
Q ss_pred CeEEEEEeEeCC--cc---ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSV--GT---AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~--~~---~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+.. +. .....+.|.|..
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 120 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTLVTVSS 120 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEEEEECS
T ss_pred CEEEEEEEecCCcCCchhhhcccceEEEEcc
Confidence 999999998321 11 122345777754
No 454
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.44 E-value=4.9e-06 Score=52.16 Aligned_cols=76 Identities=18% Similarity=0.320 Sum_probs=45.9
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--ccCC----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--TSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||.. ..+. .... ....+..... .........|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (257)
T 3bn9_D 11 LVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAED 90 (257)
T ss_dssp EECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGG
T ss_pred EEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhh
Confidence 467899999999998765 6789999853 2111 0000 0011111111 11111234567789999
Q ss_pred CeEEEEEeEeCCc
Q psy8666 65 GGVYWCLARNSVG 77 (124)
Q Consensus 65 ~g~y~C~~~~~~~ 77 (124)
.|.|.|.+.+..+
T Consensus 91 sG~Y~C~~~~~~g 103 (257)
T 3bn9_D 91 TAVYYCARPYLTY 103 (257)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998754
No 455
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.44 E-value=1.6e-06 Score=54.77 Aligned_cols=90 Identities=14% Similarity=0.226 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEeeec-cC-CCeEEEEeC--CEEeeccCCC-------CCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEG-KP-EPTIEWYKD--GELVETSKSD-------AKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~-~p-~p~v~w~k~--g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+.+|+++.|.|.+.+ .+ .+.+.|||. +..+....+. ...+......... ....|.+++.+|.|.|.|
T Consensus 150 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~-~~L~I~~v~~~DsG~Y~C 228 (280)
T 3fku_X 150 SKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNT-ASLTITGLQPEDEADYYC 228 (280)
T ss_dssp EECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTE-EEEEECSCCGGGCSEEEE
T ss_pred EEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCE-EEEEECCCCHHHCEEEEE
Confidence 4678999999999987 44 478999983 2222100000 0111111112222 234568889999999999
Q ss_pred EeEeCC--ccceeeeEEEEEEeee
Q psy8666 71 LARNSV--GTAVSRNATLQVAVVI 92 (124)
Q Consensus 71 ~~~~~~--~~~~~~~~~l~v~~~~ 92 (124)
.+.+.. .......+.|.|...+
T Consensus 229 ~~~~~~~~~~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 229 STWDSSLSAVVFGGGTKLTVLGQP 252 (280)
T ss_dssp EEEETTTTEEEEBCCCEEEEC---
T ss_pred EEecCCCCceEECCCEEEEECCCC
Confidence 999876 2223445566665433
No 456
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.44 E-value=6.6e-06 Score=49.96 Aligned_cols=88 Identities=16% Similarity=0.311 Sum_probs=50.1
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe--eccCCC------------CCceEEEccC-CcEEEEEEEcCCCc
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV--ETSKSD------------AKSQRVILPT-GSLFFLRVVHGKKE 62 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~--~~~~~~------------~~~~~~~~~~-~~~~~~~~i~~~~~ 62 (124)
.+..|+.+.|.|.+.+.+ .+.+.|||.. ... ...... ...+...... ........|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 90 (221)
T 3m8o_H 11 LVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKS 90 (221)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCH
Confidence 467899999999998643 6789999732 111 100000 0011111111 11122345688899
Q ss_pred cCCeEEEEEeEeCCc-cceeeeEEEEEE
Q psy8666 63 QDGGVYWCLARNSVG-TAVSRNATLQVA 89 (124)
Q Consensus 63 ~d~g~y~C~~~~~~~-~~~~~~~~l~v~ 89 (124)
+|.|.|.|.+.+... ........|.|.
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 91 DDTAMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp GGCEEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred HHCEEEEEEEECCChhheECCCEEEEEe
Confidence 999999999988631 222334556664
No 457
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.44 E-value=2.1e-06 Score=52.98 Aligned_cols=73 Identities=18% Similarity=0.335 Sum_probs=44.1
Q ss_pred EecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--c--cCCC--------CCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 3 VAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--T--SKSD--------AKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~--~~~~--------~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
+..|+.+.|.|.+.+.+ .+.+.|+|+. ..+. . .... ...+..... .........|.+++.+|.
T Consensus 139 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 218 (247)
T 1svz_A 139 KKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDT 218 (247)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHC
Confidence 56799999999998764 5689999853 2111 0 0000 001111111 011122345678899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.|.
T Consensus 219 G~Y~C~a~n~ 228 (247)
T 1svz_A 219 ATYFCVRDRH 228 (247)
T ss_dssp EEEEEEEEEG
T ss_pred EEEEEEEecc
Confidence 9999999985
No 458
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.44 E-value=5.7e-06 Score=51.12 Aligned_cols=89 Identities=19% Similarity=0.320 Sum_probs=50.6
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccCCCC-----CceEEEc-cCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSKSDA-----KSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~~~~-----~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+.....+.|||. |..+. ...... ..+.... ..........|.+++.+|.|.|.|.
T Consensus 12 ~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~ 91 (229)
T 2q86_A 12 VVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYFCV 91 (229)
T ss_dssp EEETTCCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred EEecCCCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEEEE
Confidence 567899999999987666678999984 22111 000000 0111111 1111223455788899999999999
Q ss_pred eEeCCccceeeeEEEEEEe
Q psy8666 72 ARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 72 ~~~~~~~~~~~~~~l~v~~ 90 (124)
+.+...........|.|..
T Consensus 92 ~~~~~~~~~g~gt~L~V~~ 110 (229)
T 2q86_A 92 VGDRGSALFGSGTQLIVIP 110 (229)
T ss_dssp ESCGGGCEECCCEEEEEEC
T ss_pred EEecCcccccCCEEEEEEC
Confidence 8763211222344666653
No 459
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.44 E-value=1.7e-07 Score=58.17 Aligned_cols=73 Identities=12% Similarity=0.154 Sum_probs=44.4
Q ss_pred cCCCEEEEEeeecc-CC-CeEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEGK-PE-PTIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~-p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+. |. +.+.|+|+|..+..... .........++. ......|..++.+|.|.|.|.+.|....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~-~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL-NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEE-EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEECCCcccCcce-eccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 36789999999874 44 45999999987653200 000000011111 1223344555788999999999997654
No 460
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.44 E-value=3.8e-06 Score=46.99 Aligned_cols=88 Identities=16% Similarity=0.287 Sum_probs=50.4
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEE---eecc-C---CCCCceEEEccCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GEL---VETS-K---SDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~---~~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+.+|+++.|.|...+.+ ...+.|||. +.. +... . .....+........ .....|.+++.+|.|.|.|
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~-~~sL~I~~l~~~DsG~Y~C 89 (123)
T 3t0v_A 11 SGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGT-SASLAISGLRSEDEADYYC 89 (123)
T ss_dssp EECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT-EEEEEECSCCGGGCEEEEE
T ss_pred EEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCC-EEEEEECCCCHHHCEEEEE
Confidence 577899999999987654 467999984 221 1110 0 00011222211112 2345678889999999999
Q ss_pred EeEeCCc--cceeeeEEEEEEe
Q psy8666 71 LARNSVG--TAVSRNATLQVAV 90 (124)
Q Consensus 71 ~~~~~~~--~~~~~~~~l~v~~ 90 (124)
.+.+... ........|.|..
T Consensus 90 ~~~~~~~~~~~fG~GT~l~V~~ 111 (123)
T 3t0v_A 90 LSWDDSLNGWVFGGGTKVTVLD 111 (123)
T ss_dssp EEEETTTTEEEEBCCEEEEECC
T ss_pred EEEcCCCCceEECCCEEEEEcc
Confidence 9887531 1223344555543
No 461
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.44 E-value=1.2e-06 Score=53.34 Aligned_cols=73 Identities=15% Similarity=0.278 Sum_probs=47.1
Q ss_pred ecCCCEEEEEeeecc-CC--CeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 4 AKNEPVTLNCKAEGK-PE--PTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~--p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
..|+.+.|.|.+.+. |. +.+.|++++..+.... .......++... ....|......|.|.|.|.+.|..+.
T Consensus 135 ~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~----~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 135 LSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVN----FPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNP 210 (220)
T ss_dssp SCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEE----CCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred cCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEe----cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCc
Confidence 468899999999876 66 6899999986542100 011112222222 22344555667899999999999877
Q ss_pred ce
Q psy8666 79 AV 80 (124)
Q Consensus 79 ~~ 80 (124)
..
T Consensus 211 ~~ 212 (220)
T 2fbj_H 211 VQ 212 (220)
T ss_dssp CE
T ss_pred eE
Confidence 63
No 462
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.43 E-value=4.1e-06 Score=52.52 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=50.2
Q ss_pred EecCCCEEEEEeeeccCC--CeEEEEeCC--EEee--cc--CCC--------CCceEEEc-cCCcEEEEEEEcCCCccCC
Q psy8666 3 VAKNEPVTLNCKAEGKPE--PTIEWYKDG--ELVE--TS--KSD--------AKSQRVIL-PTGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 3 ~~~G~~~~l~C~~~~~p~--p~v~w~k~g--~~~~--~~--~~~--------~~~~~~~~-~~~~~~~~~~i~~~~~~d~ 65 (124)
+..|+.+.|.|.+.+.+. +.+.|+|+. ..+. .. ... ...+.... ..........|.+++.+|.
T Consensus 150 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 229 (264)
T 2gjj_A 150 VKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDS 229 (264)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccC
Confidence 567999999999987764 789999863 2111 00 000 00111111 1111123345688899999
Q ss_pred eEEEEEeEeCC---c-cceeeeEEEEEE
Q psy8666 66 GVYWCLARNSV---G-TAVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~~---~-~~~~~~~~l~v~ 89 (124)
|.|.|.+.|.. . ........|.|.
T Consensus 230 G~Y~C~a~n~~~~~~~~~fg~gt~l~v~ 257 (264)
T 2gjj_A 230 ADYYCVRSGNYEEYAMDYWGQGTSVTVS 257 (264)
T ss_dssp EEEEEEEECSGGGCSCCCBCCCEEEEEC
T ss_pred EEEEEEEecCCCCcceEEECCCEEEEEe
Confidence 99999999851 1 112345566654
No 463
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.43 E-value=4.4e-06 Score=51.42 Aligned_cols=88 Identities=17% Similarity=0.272 Sum_probs=50.7
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EEe--ec--cCC------CCCceEEEccCCcEEEEEEEcCCCccCCeEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--ELV--ET--SKS------DAKSQRVILPTGSLFFLRVVHGKKEQDGGVYW 69 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~~--~~--~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~ 69 (124)
.+.+|+.+.|.|.+. .+.+.+.|||+. ... .. ... ....+..............|.+++.+|.|.|.
T Consensus 10 ~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (238)
T 1bec_A 10 VAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYF 88 (238)
T ss_dssp EEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEE
T ss_pred EEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEE
Confidence 577899999999985 467889999853 111 00 000 00011111111111233456888999999999
Q ss_pred EEeEeCCc----cceeeeEEEEEEe
Q psy8666 70 CLARNSVG----TAVSRNATLQVAV 90 (124)
Q Consensus 70 C~~~~~~~----~~~~~~~~l~v~~ 90 (124)
|.+.+..+ ........|.|..
T Consensus 89 C~~~~~~~~~~~~~~~~~~~l~V~~ 113 (238)
T 1bec_A 89 CASGGGRGSYAEQFFGPGTRLTVLE 113 (238)
T ss_dssp EEEESCTTCGGGCEECCCEEEEEES
T ss_pred EEEecCCCCccccccCCCEEEEEec
Confidence 99998642 1112344566654
No 464
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.43 E-value=2.4e-06 Score=51.40 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=43.9
Q ss_pred CCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 6 NEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 6 G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
++...+.|.. .+.|.+.+.|++++...... ........+.. .....|..++..|.|.|.|.+.|..+..
T Consensus 136 ~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~-----~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~ 207 (225)
T 4fmk_A 136 QSVAVARCVSTGGRPPARITWISSLGGEAKD-----TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEE 207 (225)
T ss_dssp SCEEEEEEEEEEEBSCCEEEEECSSCCEEEE-----EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred eeeeeeeeeecCCCCCCEEEEEECCccccCC-----cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCe
Confidence 4555566654 56788899999987654421 11112222322 2234556778999999999999987765
No 465
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.43 E-value=2.1e-07 Score=56.94 Aligned_cols=74 Identities=14% Similarity=0.182 Sum_probs=44.8
Q ss_pred cCCCEEEEEeeecc-C-CCeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 5 KNEPVTLNCKAEGK-P-EPTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p-~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
.|+.+.|.|.+.+. | .+.+.|+|+|..+..... .........++... ....+...+.+|.|.|.|.+.|.....
T Consensus 149 ~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 149 KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ-ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp HHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE-EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cCCceEEEEEEcccCCCceEEEEEECCCCCCCcee-ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 46779999999874 5 589999999987653100 00000011222221 222334446678999999999986543
No 466
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.43 E-value=6.9e-06 Score=45.46 Aligned_cols=74 Identities=19% Similarity=0.315 Sum_probs=44.1
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe---e-ccC--------CCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV---E-TSK--------SDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~---~-~~~--------~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.+ ...+.|||.. ... . ... .....+..... .........|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 3b9v_A 11 LVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAED 90 (120)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCCHHH
Confidence 567899999999987533 5679999842 211 1 000 00011222111 11122345578889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (120)
T 3b9v_A 91 TAVYYCARWGG 101 (120)
T ss_dssp CEEEEEEEECT
T ss_pred CEEEEEEEEcC
Confidence 99999998864
No 467
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.42 E-value=1.1e-05 Score=44.98 Aligned_cols=75 Identities=16% Similarity=0.332 Sum_probs=44.8
Q ss_pred CEEecCCCEEEEEeeecc--CCCeEEEEeC--CEE---ee-c---c--C-----CCCCceEEEcc-CCcEEEEEEEcCCC
Q psy8666 1 MVVAKNEPVTLNCKAEGK--PEPTIEWYKD--GEL---VE-T---S--K-----SDAKSQRVILP-TGSLFFLRVVHGKK 61 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~--p~p~v~w~k~--g~~---~~-~---~--~-----~~~~~~~~~~~-~~~~~~~~~i~~~~ 61 (124)
+.+.+|+.+.|.|...+. ....+.|||. +.. +. . . . .....+..... .........|.+++
T Consensus 10 ~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 89 (124)
T 1dlf_H 10 GLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNTLR 89 (124)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred EEEcCCCCEEEEeECCCccCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 457889999999998753 2567999973 221 11 1 0 0 00111222221 11222345578889
Q ss_pred ccCCeEEEEEeEeC
Q psy8666 62 EQDGGVYWCLARNS 75 (124)
Q Consensus 62 ~~d~g~y~C~~~~~ 75 (124)
.+|.|.|.|.+.+.
T Consensus 90 ~~Dsg~Y~C~~~~~ 103 (124)
T 1dlf_H 90 AEDTGIYYCTGIYY 103 (124)
T ss_dssp GGGCEEEEEEEEBT
T ss_pred HHHCEEEEEEEEeC
Confidence 99999999998864
No 468
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.41 E-value=2.4e-06 Score=47.01 Aligned_cols=76 Identities=9% Similarity=0.196 Sum_probs=45.3
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EE---eeccC-CCC------CceEEEcc-CCcEEEEEEEcCCCccCCe
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--EL---VETSK-SDA------KSQRVILP-TGSLFFLRVVHGKKEQDGG 66 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~---~~~~~-~~~------~~~~~~~~-~~~~~~~~~i~~~~~~d~g 66 (124)
.+.+|+++.|.|...+. ....+.|||.. .. +.... ... ..+..... .........|.+++.+|.|
T Consensus 10 ~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg 89 (114)
T 1u9k_A 10 DLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQVTDSG 89 (114)
T ss_dssp EECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCCChHHCE
Confidence 57789999999998643 34579999852 21 11100 000 01111111 1112234557888999999
Q ss_pred EEEEEeEeCCc
Q psy8666 67 VYWCLARNSVG 77 (124)
Q Consensus 67 ~y~C~~~~~~~ 77 (124)
.|.|.+.+..+
T Consensus 90 ~Y~C~~~~~~~ 100 (114)
T 1u9k_A 90 LYRCVIYHPPN 100 (114)
T ss_dssp EEEEEEECTTS
T ss_pred EEEEEEecCCC
Confidence 99999988653
No 469
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.41 E-value=3.4e-06 Score=51.08 Aligned_cols=74 Identities=12% Similarity=0.233 Sum_probs=44.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE--eec-cCC--CCCceEEEccC--CcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL--VET-SKS--DAKSQRVILPT--GSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~--~~~-~~~--~~~~~~~~~~~--~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+..|+.+.|.|...+.+ +.+.|||.. .. +.. ... ....+...... ........|.+++.+|.|.|.|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (207)
T 1ypz_E 12 SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAA 90 (207)
T ss_dssp EEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEE
T ss_pred EEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 577899999999987643 579999843 21 110 000 00011212211 122233456888999999999999
Q ss_pred EeCC
Q psy8666 73 RNSV 76 (124)
Q Consensus 73 ~~~~ 76 (124)
.+..
T Consensus 91 ~~~~ 94 (207)
T 1ypz_E 91 DTWH 94 (207)
T ss_dssp ECBC
T ss_pred ecCC
Confidence 8863
No 470
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.41 E-value=1.5e-05 Score=44.07 Aligned_cols=74 Identities=20% Similarity=0.370 Sum_probs=44.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--E--E-ee-ccC--------CCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--E--L-VE-TSK--------SDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~--~-~~-~~~--------~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.+ ...+.|||.. . . +. ... .....+..... .........|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 1n4x_H 11 LKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNED 90 (120)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 567899999999987533 4679999843 1 1 11 000 00111222211 11122345578889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sG~Y~C~~~~~ 101 (120)
T 1n4x_H 91 TATYFCVRDRH 101 (120)
T ss_dssp CEEEEEEEESS
T ss_pred CEEEEEEEEcc
Confidence 99999998864
No 471
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.41 E-value=9.5e-06 Score=51.53 Aligned_cols=89 Identities=19% Similarity=0.312 Sum_probs=50.6
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEee--ccCC----------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELVE--TSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~~--~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|.+.+.+ .+.+.|+|+. .... .... ....+..... .........|.+++.+|
T Consensus 33 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 112 (291)
T 2gki_A 33 LVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSED 112 (291)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHH
Confidence 467899999999988766 5789999853 2110 0000 0001111110 01112234567889999
Q ss_pred CeEEEEEeEeCC-cc---ceeeeEEEEEEe
Q psy8666 65 GGVYWCLARNSV-GT---AVSRNATLQVAV 90 (124)
Q Consensus 65 ~g~y~C~~~~~~-~~---~~~~~~~l~v~~ 90 (124)
.|.|.|.+.+.. +. .......|.|..
T Consensus 113 sG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~ 142 (291)
T 2gki_A 113 SAVYYCARGAYKRGYAMDYWGQGTSVTVSS 142 (291)
T ss_dssp CEEEEEEEECGGGTTCEEEECCCEEEEECC
T ss_pred CEEEEEEEeccccccccceeCCCcEEEEec
Confidence 999999999864 21 112234666655
No 472
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.41 E-value=9.6e-06 Score=50.42 Aligned_cols=89 Identities=15% Similarity=0.238 Sum_probs=49.9
Q ss_pred CEEecCCCEEEEEeeecc--CCCeEEEEeCC--E--EeeccCC----------CCCceEEEcc-CCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGK--PEPTIEWYKDG--E--LVETSKS----------DAKSQRVILP-TGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~--~~~~~~~----------~~~~~~~~~~-~~~~~~~~~i~~~~~~ 63 (124)
+.+.+|+.+.|.|.+.+. +.+.+.|||.. . ....... ....+..... .........|.+++.+
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (253)
T 3liz_H 10 GLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSE 89 (253)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGG
T ss_pred EEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 357789999999998763 35679999842 1 1110000 0001111111 1111223456888999
Q ss_pred CCeEEEEEeEeCC---ccceeeeEEEEEE
Q psy8666 64 DGGVYWCLARNSV---GTAVSRNATLQVA 89 (124)
Q Consensus 64 d~g~y~C~~~~~~---~~~~~~~~~l~v~ 89 (124)
|.|.|.|.+.+.. .........|.|.
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~ 118 (253)
T 3liz_H 90 DTAMYYCTRDPAGRAWFAYWGQGTLVTVS 118 (253)
T ss_dssp GCEEEEEEECCBTTTBCCEECCCEEEEEC
T ss_pred hCEEEEEEEecCCcceeeEECCCEEEEEe
Confidence 9999999998752 1111334566664
No 473
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.41 E-value=7.3e-06 Score=50.31 Aligned_cols=88 Identities=15% Similarity=0.256 Sum_probs=51.4
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EE---ee-ccCCC-------CCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--EL---VE-TSKSD-------AKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~---~~-~~~~~-------~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|.+.+. +.+.+.|||.. .. +. ..... ...+..... .........|.+++.+|.
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (230)
T 1ypz_F 12 SRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDE 91 (230)
T ss_dssp EEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhC
Confidence 56789999999998764 56789999842 21 11 00000 112222221 121223445688899999
Q ss_pred eEEEEEeEeC---CccceeeeEEEEEE
Q psy8666 66 GVYWCLARNS---VGTAVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~---~~~~~~~~~~l~v~ 89 (124)
|.|.|.+.+. ........+.|.|.
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~L~V~ 118 (230)
T 1ypz_F 92 AIYYCSYGEGSSGFHKVFAEGTKLIVI 118 (230)
T ss_dssp SEEEEEECCTTTCCCCEECSCEEEEEE
T ss_pred EEEEEEEECCCCCcccccCCCEEEEEe
Confidence 9999999874 11112234567775
No 474
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.41 E-value=1.6e-05 Score=44.41 Aligned_cols=74 Identities=20% Similarity=0.393 Sum_probs=44.1
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-cc-CC------CCCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TS-KS------DAKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~-~~------~~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+++.|.|...+.+ ...+.|||.. .. +. .. .. ....+..... .........|.+++.+|.
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds 90 (124)
T 1yc7_A 11 SVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDT 90 (124)
T ss_dssp EECTTCCEEEEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EEecCCCEEEEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCHHHC
Confidence 567899999999987543 4568999842 21 11 00 00 0011222111 111223455788899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (124)
T 1yc7_A 91 GMYYCQIQCG 100 (124)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEeC
Confidence 9999998875
No 475
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.40 E-value=4.2e-07 Score=54.81 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=43.4
Q ss_pred cCCCEEEEEeeeccCC--CeEEEEeCCEEeeccCCCCCceEEEccCCcEE--EEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEGKPE--PTIEWYKDGELVETSKSDAKSQRVILPTGSLF--FLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~~p~--p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+.++ +.+.|+|+|..+..... ..........+... ....+...+..|.|.|.|.+.|....
T Consensus 126 ~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~-~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 126 GTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVL-QSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE-EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCCCcEEEEEEeeecCCceEEEEEECCcccCCceE-eccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 4667999999987654 37999999988763100 00000011222222 12233334566799999999997643
No 476
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.40 E-value=3.1e-05 Score=42.78 Aligned_cols=74 Identities=19% Similarity=0.368 Sum_probs=44.2
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEE---ee-cc--------CCCCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GEL---VE-TS--------KSDAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~---~~-~~--------~~~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.. ...+.|||. +.. +. .. ......+..... .........|.+++.+|
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 1mfa_H 11 VARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLTSED 90 (120)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCCEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 467899999999987533 467999973 221 11 00 000111222221 11222344578889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (120)
T 1mfa_H 91 SAVYYCTRGGH 101 (120)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEecC
Confidence 99999998875
No 477
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.38 E-value=3.8e-06 Score=46.11 Aligned_cols=88 Identities=17% Similarity=0.142 Sum_probs=49.3
Q ss_pred CEEecCCCEEEEEeeecc--CCCeEEEEeCC-------EEe-eccCCC----CCceEEEccC-CcEEEEEEEcCCCccCC
Q psy8666 1 MVVAKNEPVTLNCKAEGK--PEPTIEWYKDG-------ELV-ETSKSD----AKSQRVILPT-GSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~--p~p~v~w~k~g-------~~~-~~~~~~----~~~~~~~~~~-~~~~~~~~i~~~~~~d~ 65 (124)
+.+..|+++.|.|..... ....+.|+|.. ..+ ...... ...+...... ........|.+++.+|.
T Consensus 7 v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 86 (115)
T 2or7_A 7 VQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDG 86 (115)
T ss_dssp EEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGC
T ss_pred EEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHC
Confidence 357789999999997643 35679999974 111 111000 0111111110 00012235678899999
Q ss_pred eEEEEEeEeCCccceeeeEEEEEE
Q psy8666 66 GVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 66 g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
|.|.|.+....... ...+.|.|.
T Consensus 87 G~Y~C~v~~~~~~~-~~~v~L~V~ 109 (115)
T 2or7_A 87 GPYCCVVEIPGAFH-FVDYMLEVK 109 (115)
T ss_dssp EEEEEEECCTTSCE-EEEEEEEEE
T ss_pred EEEEEEEECCCcee-EEEEEEEEc
Confidence 99999988754333 344555543
No 478
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.38 E-value=6.1e-07 Score=54.52 Aligned_cols=70 Identities=23% Similarity=0.341 Sum_probs=43.4
Q ss_pred ecCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+.+. |.| .+.|++++....... . ... . ..+. ......|......+ |.|.|.+.|..+..
T Consensus 138 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~--~-~~~-~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 211 (220)
T 1pz5_B 138 TSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRT--V-SSV-L-QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKV 211 (220)
T ss_dssp SCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEE--C-CCE-E-ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEE--c-CCc-c-cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccE
Confidence 468899999999887 888 999999876310000 0 000 0 1111 11223344445545 99999999998865
No 479
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.38 E-value=1e-07 Score=58.36 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=38.4
Q ss_pred cCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 5 KNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
.|+.+.|.|.+.+. |.+ .+.|+|+|..+..... .........++. ......|...+.+|.|.|.|.+.|...
T Consensus 148 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 148 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL-NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp HTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE-EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred cCCceEEEEEEccccCCceEEEEEECCeeCCCCce-EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 48889999999885 444 6999999987653100 000000011222 112233444466789999999999643
No 480
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.37 E-value=2.8e-07 Score=56.51 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=40.9
Q ss_pred ecCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+.+. |.| .+.|++++..+.... . ... . ..+. ......|...+..| |.|.|.+.|..+..
T Consensus 134 ~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~--~-~~~-~-~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 207 (227)
T 1mju_H 134 TSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT--F-PAV-L-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 207 (227)
T ss_dssp ----CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE--C-CCE-E-ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTE
T ss_pred cCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEE--C-Cce-e-cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCc
Confidence 468899999999875 777 899999886532100 0 011 1 1121 12233445555567 99999999976543
No 481
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.37 E-value=8.3e-06 Score=44.90 Aligned_cols=74 Identities=19% Similarity=0.357 Sum_probs=44.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-ccC--C------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TSK--S------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~~--~------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.. ...+.|||.. .. +. ... . ....+..... .........|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (117)
T 2yc1_A 11 LVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLRAED 90 (117)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 467899999999987533 4679999842 21 11 000 0 0011222111 11222345578889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (117)
T 2yc1_A 91 TAVYYCARGGV 101 (117)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEeC
Confidence 99999998764
No 482
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.37 E-value=2.3e-06 Score=47.97 Aligned_cols=87 Identities=9% Similarity=0.139 Sum_probs=49.1
Q ss_pred EEecCCCEEEEEeeecc---CCCeEEEEeCC--E---Eeec---cC---C--CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGK---PEPTIEWYKDG--E---LVET---SK---S--DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~---p~p~v~w~k~g--~---~~~~---~~---~--~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+. ....+.|||.. . .+.. .. . ....+..... .........|.+++.+|
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~D 90 (126)
T 2h32_A 11 SSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPED 90 (126)
T ss_dssp EEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCChhH
Confidence 57789999999998753 24679999842 1 1110 00 0 0011222211 11122345678889999
Q ss_pred CeEEEEEeEeCCccceeeeEEEEEE
Q psy8666 65 GGVYWCLARNSVGTAVSRNATLQVA 89 (124)
Q Consensus 65 ~g~y~C~~~~~~~~~~~~~~~l~v~ 89 (124)
.|.|.|.+.+..+.. ...+.|.|.
T Consensus 91 sG~Y~C~~~~~~~~~-~~~t~l~v~ 114 (126)
T 2h32_A 91 EAMYYCAMGARSSEK-EEREREWEE 114 (126)
T ss_dssp CEEEEEEEECSCCCC-CCTTCC---
T ss_pred CEEEEEEEEcCCCCc-ceeEEEeec
Confidence 999999998866544 334444443
No 483
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.37 E-value=1.3e-05 Score=44.53 Aligned_cols=74 Identities=20% Similarity=0.377 Sum_probs=44.9
Q ss_pred EEecCCCEEEEEeeecc--CCCeEEEEeCC--EE---ee-ccC--C------CCCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGK--PEPTIEWYKDG--EL---VE-TSK--S------DAKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~--p~p~v~w~k~g--~~---~~-~~~--~------~~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+. ....+.|||.. .. +. ... . ....+.....+ ........|.+++.+|
T Consensus 13 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 92 (123)
T 2p45_B 13 LVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLKPED 92 (123)
T ss_dssp EEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCCGGG
T ss_pred EEeCCCCEEEEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 56789999999998753 35679999842 21 11 000 0 01122222221 1223345678889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 93 sg~Y~C~~~~~ 103 (123)
T 2p45_B 93 TATYYCAAGGY 103 (123)
T ss_dssp CEEEEEEESSC
T ss_pred CEEEEEEEEec
Confidence 99999998763
No 484
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.36 E-value=1.1e-05 Score=44.36 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=44.7
Q ss_pred CEEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-ccC-------CCCCceEEEccC-CcEEEEEEEcCCCccC
Q psy8666 1 MVVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TSK-------SDAKSQRVILPT-GSLFFLRVVHGKKEQD 64 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~~-------~~~~~~~~~~~~-~~~~~~~~i~~~~~~d 64 (124)
+.+.+|+++.|.|...+.+ ...+.|||.. .. +. ... .....+.....+ ........|.+++.+|
T Consensus 10 ~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 89 (116)
T 1a2y_B 10 GLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDD 89 (116)
T ss_dssp SEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHH
Confidence 3577899999999987543 4679999842 21 11 000 000112222111 1122345568889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 90 sg~Y~C~~~~~ 100 (116)
T 1a2y_B 90 TARYYCARERD 100 (116)
T ss_dssp CEEEEEEEESS
T ss_pred CEEEEEEEecC
Confidence 99999998864
No 485
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.35 E-value=3.2e-05 Score=43.14 Aligned_cols=90 Identities=12% Similarity=0.191 Sum_probs=52.2
Q ss_pred EEecCCCEEEEEeeeccC-CCeEEEEeCCE-----Eeec-cCCC---CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKP-EPTIEWYKDGE-----LVET-SKSD---AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWC 70 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p-~p~v~w~k~g~-----~~~~-~~~~---~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C 70 (124)
.+.+|+.+.|.|...... ...+.|||... .+.. .... ...+.... ......+...|.+++.+|.|.|.|
T Consensus 13 ~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C 92 (124)
T 2nms_A 13 NGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWC 92 (124)
T ss_dssp EEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred EEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEE
Confidence 467899999999986543 23589998532 1111 1000 01111121 111223345578889999999999
Q ss_pred EeEeCCccceeeeEEEEEEeee
Q psy8666 71 LARNSVGTAVSRNATLQVAVVI 92 (124)
Q Consensus 71 ~~~~~~~~~~~~~~~l~v~~~~ 92 (124)
....... .....+.|.|...|
T Consensus 93 ~~~~~~~-~~~~~v~L~V~~~~ 113 (124)
T 2nms_A 93 GIEKTGN-DLGVTVQVTIDPAP 113 (124)
T ss_dssp EEEETTE-EEEEEEEEEEECCC
T ss_pred EEEcCCC-CccEEEEEEEeCCC
Confidence 9887543 33445666665543
No 486
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.35 E-value=2.1e-07 Score=56.49 Aligned_cols=70 Identities=21% Similarity=0.296 Sum_probs=43.1
Q ss_pred ecCCCEEEEEeeec-cCCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 4 AKNEPVTLNCKAEG-KPEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 4 ~~G~~~~l~C~~~~-~p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
..|+.+.|.|.+.+ .|.| .+.|+|++..+.... ...... .+. ......|.. ...|.|.|.|.+.|..+..
T Consensus 137 ~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~----~~~~~~-~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~ 210 (219)
T 1c1e_H 137 QTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT----FPAVLQ-SDLYTLSSSVTVPS-SPRPSETVTCNVAHPASST 210 (219)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE----CCCEES-SSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTE
T ss_pred ccCCeEEEEEEcccccCCCeEEEEEeCCcccceEe----cCCccc-CCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCc
Confidence 46889999999988 7998 999999987532100 000011 122 111222322 3335699999999977654
No 487
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.35 E-value=2.7e-05 Score=43.09 Aligned_cols=74 Identities=20% Similarity=0.335 Sum_probs=43.9
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EEe---e-ccCC--------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--ELV---E-TSKS--------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~~---~-~~~~--------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+.+.|.|...+.+ ...+.|||.. ... . .... ....+..... .........|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (121)
T 1j05_H 11 LVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSED 90 (121)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCCHHH
Confidence 467899999999987543 4679999842 211 1 0000 0001111111 11112335578889999
Q ss_pred CeEEEEEeEeC
Q psy8666 65 GGVYWCLARNS 75 (124)
Q Consensus 65 ~g~y~C~~~~~ 75 (124)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (121)
T 1j05_H 91 TAVYYCAPFGY 101 (121)
T ss_dssp CEEEEEEEEBT
T ss_pred CEEEEEEEEcC
Confidence 99999998875
No 488
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.35 E-value=2.6e-06 Score=52.38 Aligned_cols=71 Identities=14% Similarity=0.276 Sum_probs=43.1
Q ss_pred cC-CCEEEEEeeecc-CCC-eEEEEe-CCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCc--cCCeEEEEEeEeCC
Q psy8666 5 KN-EPVTLNCKAEGK-PEP-TIEWYK-DGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKE--QDGGVYWCLARNSV 76 (124)
Q Consensus 5 ~G-~~~~l~C~~~~~-p~p-~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~d~g~y~C~~~~~~ 76 (124)
.| +.+.|.|.+.+. |.| .+.|++ +|..+... ... ... . ..+.. .....|..... .|.|.|.|.+.|..
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~-~~~-~~~-~-~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~ 214 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISST-RGF-PSV-L-RGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPN 214 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCE-EEC-CCE-E-ETTEEEEEEEEEECTTCC---CCCEEEEEEECTT
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeE-EEC-Ccc-c-cCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCC
Confidence 56 889999999876 777 899999 88776421 000 000 0 11221 12233444444 67899999999987
Q ss_pred ccc
Q psy8666 77 GTA 79 (124)
Q Consensus 77 ~~~ 79 (124)
+..
T Consensus 215 ~~~ 217 (232)
T 1dn0_B 215 GNK 217 (232)
T ss_dssp CCE
T ss_pred CCc
Confidence 764
No 489
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.35 E-value=3.8e-06 Score=50.55 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=43.9
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeCC--EE---ee-ccCC---CCCceEEEcc-CCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKDG--EL---VE-TSKS---DAKSQRVILP-TGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~g--~~---~~-~~~~---~~~~~~~~~~-~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+.....+.|||.. .. +. .... ....+..... .........|..++.+|.|.|.|.
T Consensus 12 ~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~ 91 (194)
T 1lp9_E 12 TLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALYYCA 91 (194)
T ss_dssp EEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEEEEE
T ss_pred EEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCeeEEEE
Confidence 5678999999999877666789999843 21 11 1000 0011222211 000112235677899999999999
Q ss_pred eEe
Q psy8666 72 ARN 74 (124)
Q Consensus 72 ~~~ 74 (124)
+.+
T Consensus 92 ~~~ 94 (194)
T 1lp9_E 92 LFL 94 (194)
T ss_dssp EEE
T ss_pred Eec
Confidence 986
No 490
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=98.34 E-value=7.7e-06 Score=49.54 Aligned_cols=89 Identities=13% Similarity=0.237 Sum_probs=52.0
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEE---eec-cCCC---CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEE
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GEL---VET-SKSD---AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCL 71 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~---~~~-~~~~---~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~ 71 (124)
.+.+|+.+.|.|...+.....+.|||. |.. +.. .... ...+.... ..........|.+++.+|.|.|.|.
T Consensus 11 ~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca 90 (199)
T 3gsn_A 11 HVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCA 90 (199)
T ss_dssp EEETTCCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCGGGCEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcccCCccEEEE
Confidence 578899999999987655568999984 322 111 0000 01111111 1222334456788899999999999
Q ss_pred eEeCCccceeeeEEEEEEe
Q psy8666 72 ARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 72 ~~~~~~~~~~~~~~l~v~~ 90 (124)
+.............|.|..
T Consensus 91 ~~~~~~~~fG~GT~L~V~~ 109 (199)
T 3gsn_A 91 RNTGNQFYFGTGTSLTVIP 109 (199)
T ss_dssp EESSSCEEECSCEEEEEEC
T ss_pred EcccccccCCCCEEEEEec
Confidence 8653222223445666655
No 491
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.34 E-value=1.5e-05 Score=49.15 Aligned_cols=74 Identities=18% Similarity=0.306 Sum_probs=44.8
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeC--CEEeec--cC-CC--------CCceEEEcc-CCcEEEEEEEcCCCccCC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKD--GELVET--SK-SD--------AKSQRVILP-TGSLFFLRVVHGKKEQDG 65 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~--g~~~~~--~~-~~--------~~~~~~~~~-~~~~~~~~~i~~~~~~d~ 65 (124)
.+.+|+.+.|.|.+.+.| .+.+.|+|+ +..+.. .. .. ...+..... .........|..++.+|.
T Consensus 133 ~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 212 (242)
T 2znx_A 133 LVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 212 (242)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGC
T ss_pred eecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcC
Confidence 356799999999998775 478999984 332210 00 00 011111111 111122345678899999
Q ss_pred eEEEEEeEeC
Q psy8666 66 GVYWCLARNS 75 (124)
Q Consensus 66 g~y~C~~~~~ 75 (124)
|.|.|.+.|.
T Consensus 213 G~Y~C~a~~~ 222 (242)
T 2znx_A 213 ATYYCANXDG 222 (242)
T ss_dssp EEEEEEETTS
T ss_pred EEEEEeccCC
Confidence 9999999873
No 492
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=98.34 E-value=3e-05 Score=43.36 Aligned_cols=75 Identities=20% Similarity=0.332 Sum_probs=43.7
Q ss_pred CEEecCCCEEEEEeeeccCC---CeEEEEeC--CEE---ee-cc--C-----CCCCceEEEc-cCCcEEEEEEEcCCCcc
Q psy8666 1 MVVAKNEPVTLNCKAEGKPE---PTIEWYKD--GEL---VE-TS--K-----SDAKSQRVIL-PTGSLFFLRVVHGKKEQ 63 (124)
Q Consensus 1 v~~~~G~~~~l~C~~~~~p~---p~v~w~k~--g~~---~~-~~--~-----~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 63 (124)
+.+.+|+.+.|.|...+.+. ..+.||+. +.. +. .. . .....+.... ..........|.+++.+
T Consensus 10 ~~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 89 (127)
T 3cx5_J 10 GLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTE 89 (127)
T ss_dssp SEECTTSCEEEEEEEESSCTTTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEEeCcccCCCcEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEeCCCCEEEEEECCCCHH
Confidence 35778999999999876432 67999983 221 11 00 0 0000111111 11122234557888999
Q ss_pred CCeEEEEEeEeC
Q psy8666 64 DGGVYWCLARNS 75 (124)
Q Consensus 64 d~g~y~C~~~~~ 75 (124)
|.|.|.|.+.+.
T Consensus 90 Dsg~Y~C~~~~~ 101 (127)
T 3cx5_J 90 DTATYYCARSEY 101 (127)
T ss_dssp GCEEEEEEEEEE
T ss_pred HCEEEEEEEEeC
Confidence 999999988763
No 493
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.34 E-value=4.7e-06 Score=50.82 Aligned_cols=89 Identities=19% Similarity=0.309 Sum_probs=49.5
Q ss_pred EEecCCCEEEEEeeeccCCCeEEEEeC--CEEee--ccCCC----CCceEEEc-cCCcEEEEEEEcCCCccCCeEEEEEe
Q psy8666 2 VVAKNEPVTLNCKAEGKPEPTIEWYKD--GELVE--TSKSD----AKSQRVIL-PTGSLFFLRVVHGKKEQDGGVYWCLA 72 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p~p~v~w~k~--g~~~~--~~~~~----~~~~~~~~-~~~~~~~~~~i~~~~~~d~g~y~C~~ 72 (124)
.+.+|+.+.|.|...+.....+.|||. |+.+. ..... ...+.... ..........|..++.+|.|.|.|.+
T Consensus 13 ~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~ 92 (208)
T 4ei6_A 13 SVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAA 92 (208)
T ss_dssp EEETTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEE
T ss_pred EEECCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEE
Confidence 578899999999987654557899984 22211 00000 00111111 01111123346778999999999998
Q ss_pred EeCC----ccceeeeEEEEEEe
Q psy8666 73 RNSV----GTAVSRNATLQVAV 90 (124)
Q Consensus 73 ~~~~----~~~~~~~~~l~v~~ 90 (124)
.... .........|.|..
T Consensus 93 ~~~~~~~~~~~fG~GT~L~V~~ 114 (208)
T 4ei6_A 93 SEQNNYAQGLTFGLGTRVSVFP 114 (208)
T ss_dssp EECCSSCCCCEECCCEEEEEEC
T ss_pred ecCCCccccccCCCCEEEEEeC
Confidence 7521 12223455777755
No 494
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.33 E-value=6.8e-07 Score=55.01 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=46.4
Q ss_pred ecCCCEEEEEeeecc-CC-C-eEEEEeCCEEe-eccCCCCCceEEEccCCcE--EEEEEEcCCCccCCeEEEEEeEeCCc
Q psy8666 4 AKNEPVTLNCKAEGK-PE-P-TIEWYKDGELV-ETSKSDAKSQRVILPTGSL--FFLRVVHGKKEQDGGVYWCLARNSVG 77 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~-p-~v~w~k~g~~~-~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~d~g~y~C~~~~~~~ 77 (124)
..|+.+.|.|.+.+. |. | .+.|+++|..+ ... ........++.. .....|..++..|.|.|.|.+.+..+
T Consensus 26 ~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~----~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 101 (231)
T 2w59_A 26 YISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPD----PMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEEL 101 (231)
T ss_dssp HTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCC----CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTC
T ss_pred ccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccc----cccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCC
Confidence 479999999999885 64 5 89999998766 211 011111122221 22334555677899999999999765
Q ss_pred c
Q psy8666 78 T 78 (124)
Q Consensus 78 ~ 78 (124)
.
T Consensus 102 ~ 102 (231)
T 2w59_A 102 P 102 (231)
T ss_dssp S
T ss_pred C
Confidence 4
No 495
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.33 E-value=4.3e-06 Score=56.09 Aligned_cols=71 Identities=21% Similarity=0.287 Sum_probs=45.5
Q ss_pred ecCCCEEEEEeeeccCCC----eEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccC---CeEEEEEeEeCC
Q psy8666 4 AKNEPVTLNCKAEGKPEP----TIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQD---GGVYWCLARNSV 76 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~p~p----~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d---~g~y~C~~~~~~ 76 (124)
..|+.+.|.|.+.+.|++ .+.|+|++..+.... .........+.+.+... ..+...| .|.|.|.+.|..
T Consensus 262 ~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~---~~~~~~~~~g~~~~~~~-l~i~~~d~~d~G~Y~C~a~n~~ 337 (457)
T 1hzh_H 262 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK---TKPREEQYNSTYRVVSV-LTVLHQDWLNGKEYKCKVSNKA 337 (457)
T ss_dssp CTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCE---EEEEEECTTSCEEEEEE-ECCCHHHHHHTCCEEEEEECTT
T ss_pred ccCCceEEEEEEEcccCCCCceEEEEEeCCccccccc---cccceecCCCcEEEEEE-EEECHHHccCCCcEEEEEeCCC
Confidence 459999999999987543 899999998765210 01112233444433332 2234555 999999999865
Q ss_pred cc
Q psy8666 77 GT 78 (124)
Q Consensus 77 ~~ 78 (124)
+.
T Consensus 338 ~~ 339 (457)
T 1hzh_H 338 LP 339 (457)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 496
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.33 E-value=1.8e-06 Score=51.23 Aligned_cols=56 Identities=21% Similarity=0.331 Sum_probs=40.3
Q ss_pred CCCEEEEEee-eccCCCeEEEEeCCEEeeccCCCCCceEEEccCCcEEEEEEEcCCCccCCeEEEEEeEeCCccc
Q psy8666 6 NEPVTLNCKA-EGKPEPTIEWYKDGELVETSKSDAKSQRVILPTGSLFFLRVVHGKKEQDGGVYWCLARNSVGTA 79 (124)
Q Consensus 6 G~~~~l~C~~-~~~p~p~v~w~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~g~y~C~~~~~~~~~ 79 (124)
+..+.|.|.+ .+ |.|.+.|++++..+.. .....+. .. ...|.|.|.|.+.|..+..
T Consensus 115 ~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-----------~~~~~l~--~~----~~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 115 CSNATLTCEVLEG-TDVELKLYQGKEHLRS-----------LRQKTMS--YQ----WTNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp GGGTEEEEECSSC-TTCEEEEEETTEEEEE-----------ESSSEEE--EE----CSCCSSCEEEEEEETTEEE
T ss_pred CCCEEEEEEeCCC-CCCEEEEEECCeECcC-----------CCCCEEE--EE----EhhcCccEEEEEecCcCcc
Confidence 4558899999 56 9999999999987641 1111221 11 2678999999999998765
No 497
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.32 E-value=4.6e-07 Score=56.26 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=44.2
Q ss_pred cCCCEEEEEeeecc-CCC-eEEEEeCCEEeeccCCCCCceEEEccCCc--EEEEEEEcCCCccCCeEEEEEeEeCCcc
Q psy8666 5 KNEPVTLNCKAEGK-PEP-TIEWYKDGELVETSKSDAKSQRVILPTGS--LFFLRVVHGKKEQDGGVYWCLARNSVGT 78 (124)
Q Consensus 5 ~G~~~~l~C~~~~~-p~p-~v~w~k~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~d~g~y~C~~~~~~~~ 78 (124)
.|+.+.|.|.+.+. |.+ .+.|+|+|..+..... .........++. ......|..++..|.|.|.|.+.|....
T Consensus 164 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 164 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL-NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp HHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEE-EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCee-eecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 47789999999874 544 6999999987653100 000000111222 1122334455678899999999997544
No 498
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.32 E-value=1.3e-05 Score=46.33 Aligned_cols=88 Identities=19% Similarity=0.370 Sum_probs=51.7
Q ss_pred EEecCCCEEEEEeeecc-CCCeEEEEeC-----CEEee---c--c------CCCC-CceEEEc--cCCcEEEEEEEcCCC
Q psy8666 2 VVAKNEPVTLNCKAEGK-PEPTIEWYKD-----GELVE---T--S------KSDA-KSQRVIL--PTGSLFFLRVVHGKK 61 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~-p~p~v~w~k~-----g~~~~---~--~------~~~~-~~~~~~~--~~~~~~~~~~i~~~~ 61 (124)
.+.+|+.+.|.|...+. ....+.||+. +..+. . . .... ..++... .... .....|.+++
T Consensus 12 ~v~~G~svtL~C~~s~~~~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~-~~sL~I~~l~ 90 (150)
T 3dmm_D 12 LVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSR-RPFLSIMNVK 90 (150)
T ss_dssp EEETTSCEEEEEECCCSSCCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSS-SCEEEESSCC
T ss_pred EEeCCCcEEEEEEecCCCCCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCC-EEEEEECCCC
Confidence 57889999999998764 5667999985 22211 0 0 0000 1222222 2212 2234568889
Q ss_pred ccCCeEEEEEeEeCCccceeeeEEEEEEe
Q psy8666 62 EQDGGVYWCLARNSVGTAVSRNATLQVAV 90 (124)
Q Consensus 62 ~~d~g~y~C~~~~~~~~~~~~~~~l~v~~ 90 (124)
.+|.|.|.|.+.............|.|..
T Consensus 91 ~~Dsg~Y~C~~~~~~~~~fG~GT~L~V~~ 119 (150)
T 3dmm_D 91 PEDSDFYFCATVGSPKMVFGTGTKLTVVD 119 (150)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEEES
T ss_pred hhhCEEEEEEEecCCcceECCCEEEEEeC
Confidence 99999999998764322233455666654
No 499
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.32 E-value=1.5e-05 Score=44.26 Aligned_cols=72 Identities=19% Similarity=0.429 Sum_probs=43.0
Q ss_pred EEecCCCEEEEEeeeccC--CCeEEEEeCC--EE---ee-ccCC--------CCCceEEEcc-CCcEEEEEEEcCCCccC
Q psy8666 2 VVAKNEPVTLNCKAEGKP--EPTIEWYKDG--EL---VE-TSKS--------DAKSQRVILP-TGSLFFLRVVHGKKEQD 64 (124)
Q Consensus 2 ~~~~G~~~~l~C~~~~~p--~p~v~w~k~g--~~---~~-~~~~--------~~~~~~~~~~-~~~~~~~~~i~~~~~~d 64 (124)
.+.+|+++.|.|...+.+ ...+.|||.. .. +. .... ....+..... .........|.+++.+|
T Consensus 13 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 92 (121)
T 2xt1_B 13 LVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPED 92 (121)
T ss_dssp EEETTCCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 577899999999987543 5679999842 21 11 0000 0011221111 11122345578889999
Q ss_pred CeEEEEEeE
Q psy8666 65 GGVYWCLAR 73 (124)
Q Consensus 65 ~g~y~C~~~ 73 (124)
.|.|.|.+.
T Consensus 93 sG~Y~C~~~ 101 (121)
T 2xt1_B 93 TAMYYCKAS 101 (121)
T ss_dssp CEEEEEEET
T ss_pred CEEEEEEEE
Confidence 999999886
No 500
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.32 E-value=2.7e-06 Score=51.92 Aligned_cols=72 Identities=15% Similarity=0.290 Sum_probs=44.4
Q ss_pred ecCCCEEEEEeeecc-CCC-eEEEEe-CCEEeeccCCCCCceEEEccCCcE--EEEEEEcCCCc--cCCeEEEEEeEeCC
Q psy8666 4 AKNEPVTLNCKAEGK-PEP-TIEWYK-DGELVETSKSDAKSQRVILPTGSL--FFLRVVHGKKE--QDGGVYWCLARNSV 76 (124)
Q Consensus 4 ~~G~~~~l~C~~~~~-p~p-~v~w~k-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~d~g~y~C~~~~~~ 76 (124)
..|+.+.|.|.+.+. |.| .+.|++ +|..+... ... .. ....+.. .....+..... .|.|.|.|.+.|..
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~-~~~-~~--~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~ 214 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISST-RGF-PS--VLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPN 214 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCE-EEC-CC--EEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTT
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCcccee-EEC-Cc--cccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCC
Confidence 367889999999877 777 899999 88765420 000 00 0011221 11223333333 56899999999988
Q ss_pred ccc
Q psy8666 77 GTA 79 (124)
Q Consensus 77 ~~~ 79 (124)
+..
T Consensus 215 ~~~ 217 (223)
T 1dee_B 215 GNK 217 (223)
T ss_dssp CCE
T ss_pred CCC
Confidence 765
Done!