Query psy8667
Match_columns 163
No_of_seqs 180 out of 1119
Neff 7.9
Searched_HMMs 29240
Date Sat Aug 17 00:40:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 7.2E-29 2.5E-33 200.5 11.3 121 2-128 180-300 (307)
2 1a6q_A Phosphatase 2C; catalyt 100.0 3E-28 1E-32 202.7 11.8 123 2-130 173-296 (382)
3 2i0o_A Ser/Thr phosphatase; be 99.9 4E-28 1.4E-32 195.8 9.4 125 2-126 178-304 (304)
4 3d8k_A PP2C, protein phosphata 99.9 1.8E-27 6E-32 197.8 9.9 122 2-130 202-328 (377)
5 2isn_A NYSGXRC-8828Z, phosphat 99.9 1.2E-25 4.2E-30 185.9 12.5 122 2-130 210-337 (364)
6 2iq1_A Protein phosphatase 2C 99.9 6.5E-26 2.2E-30 180.3 9.6 109 2-128 150-264 (274)
7 2irm_A Mitogen-activated prote 99.9 1.5E-26 5E-31 190.8 5.9 125 2-127 206-357 (358)
8 2i44_A Serine-threonine phosph 99.9 4.7E-26 1.6E-30 184.8 8.8 121 1-127 187-322 (324)
9 3qn1_B Protein phosphatase 2C 99.9 7.4E-26 2.5E-30 185.2 9.0 114 2-130 199-332 (337)
10 2j4o_A Mitogen-activated prote 99.9 7.4E-26 2.5E-30 189.3 5.5 127 2-128 216-368 (401)
11 3kdj_B Protein phosphatase 2C 99.9 2.5E-25 8.6E-30 180.4 7.9 113 2-129 170-308 (316)
12 2pnq_A [pyruvate dehydrogenase 99.9 7.9E-25 2.7E-29 186.3 8.1 125 2-126 252-455 (467)
13 4da1_A Protein phosphatase 1K, 99.9 1.3E-24 4.4E-29 181.0 9.0 110 2-129 264-379 (389)
14 2pk0_A Serine/threonine protei 99.7 1.4E-18 4.6E-23 135.5 6.4 87 16-127 161-247 (250)
15 2j82_A TPPHA, protein serine-t 99.7 2.9E-18 1E-22 132.8 7.3 97 3-125 142-240 (240)
16 2jfr_A Ser-Thr phosphatase MSP 99.7 7.5E-18 2.6E-22 130.1 7.0 83 17-125 151-233 (234)
17 1txo_A Putative bacterial enzy 99.7 9.5E-17 3.2E-21 124.1 7.9 80 20-126 157-236 (237)
18 3rnr_A Stage II sporulation E 99.5 3.9E-16 1.3E-20 119.5 -0.3 78 19-125 130-211 (211)
19 3t91_A Stage II sporulation pr 99.0 8.5E-10 2.9E-14 85.2 6.5 75 49-129 144-223 (242)
20 3pu9_A Protein serine/threonin 98.9 2E-09 6.8E-14 83.6 5.5 74 48-128 146-226 (242)
21 3zt9_A Serine phosphatase; hyd 98.7 1.3E-08 4.4E-13 76.5 4.7 63 47-124 131-193 (193)
22 3f79_A Probable two-component 98.6 2E-08 6.8E-13 78.1 4.5 64 52-126 183-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 97.8 0.0001 3.4E-09 61.0 9.3 74 49-128 171-259 (399)
24 3eq2_A Probable two-component 96.1 0.0013 4.5E-08 53.6 1.0 64 52-126 322-392 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 71.1 0.097 3.3E-06 44.9 -5.9 55 62-125 75-134 (543)
26 2krx_A ASL3597 protein; struct 70.2 15 0.00053 23.9 5.9 52 57-108 8-71 (94)
27 1b9l_A Protein (epimerase); is 44.9 65 0.0022 21.3 7.6 56 65-126 47-104 (120)
28 3v9o_A Dihydroneopterin aldola 41.4 85 0.0029 21.6 7.9 55 66-126 66-122 (143)
29 4aey_A D-erythro-7,8-dihydrone 36.7 1.1E+02 0.0037 21.5 7.0 56 64-125 82-139 (156)
30 3cqb_A Probable protease HTPX 36.1 36 0.0012 22.2 3.4 42 43-85 47-90 (107)
31 1sql_A Dihydroneopterin aldola 36.0 1.1E+02 0.0037 21.2 6.2 56 66-126 64-121 (146)
32 3r2e_A Dihydroneopterin aldola 35.2 1E+02 0.0035 21.3 5.9 42 65-106 67-110 (143)
33 1nbu_A DHNA, probable dihydron 34.7 98 0.0033 20.4 7.4 41 65-105 44-86 (119)
34 1z9w_A DHNA, dihydroneopterin 34.5 1.1E+02 0.0036 20.8 6.1 56 65-126 44-101 (133)
35 1dhn_A DHNA, 7,8-dihydroneopte 34.3 1E+02 0.0034 20.4 6.5 42 65-106 44-87 (121)
36 3q4f_C DNA repair protein XRCC 33.1 1.4E+02 0.0048 21.7 7.4 58 43-104 38-103 (186)
37 3o1k_A Dihydroneopterin aldola 32.9 1.1E+02 0.0039 20.6 6.2 43 65-107 58-102 (132)
38 2o90_A DHNA, dihydroneopterin 31.4 1.1E+02 0.0039 20.2 6.6 43 65-107 43-87 (122)
39 3mud_A DNA repair protein XRCC 28.7 1.7E+02 0.0057 21.2 7.5 72 43-122 12-91 (175)
40 1b33_N Phycobilisome 7.8 KD li 27.3 20 0.00069 21.9 0.9 13 1-13 40-52 (67)
41 2z3b_A ATP-dependent protease 24.4 1.7E+02 0.0059 20.5 5.7 44 76-123 133-179 (180)
42 4fqn_A Malcavernin; helical do 23.7 1.6E+02 0.0053 19.2 4.7 34 70-103 26-61 (98)
43 1v9v_A KIAA0561 protein; helix 21.9 41 0.0014 22.6 1.6 42 66-108 34-85 (114)
44 4e9m_A Nucleotide-binding olig 21.7 62 0.0021 22.7 2.6 32 72-108 55-86 (144)
45 2cg8_A Dihydroneopterin aldola 21.6 2.7E+02 0.0093 21.2 6.6 42 65-106 43-86 (270)
46 3u5c_N S27A, YS15, 40S ribosom 20.4 1.8E+02 0.006 20.5 4.8 34 69-102 24-57 (151)
47 1sw5_A Osmoprotection protein 20.3 1.5E+02 0.005 22.1 4.8 43 60-102 215-270 (275)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=200.52 Aligned_cols=121 Identities=44% Similarity=0.752 Sum_probs=110.9
Q ss_pred hhhhhCCCEEEcCcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHHH
Q psy8667 2 KRIVAAGGWVEFDRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVAF 81 (163)
Q Consensus 2 ~RI~~~GG~v~~~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~ 81 (163)
+||+++||+|..+|++|.|++||||||+.||..+...+.+|+|+++|++..+.+.++|+|||||||||||+++++++.++
T Consensus 180 ~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~ 259 (307)
T 2p8e_A 180 ERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEY 259 (307)
T ss_dssp HHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred HHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHH
Confidence 69999999999999999999999999999999887777888999999999999998888999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCC
Q psy8667 82 VRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHG 128 (163)
Q Consensus 82 v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~ 128 (163)
+...+....+++.+|+.|++.|+.+++ .||||||||+|...
T Consensus 260 v~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~ 300 (307)
T 2p8e_A 260 VKSRLEVSDDLENVCNWVVDTCLHKGS------RDNMSIVLVCFSNE 300 (307)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTTC------CSCEEEEEEEC---
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHcCC------CCCeEEEEEECCCC
Confidence 998766567899999999999999987 99999999999644
No 2
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.95 E-value=3e-28 Score=202.72 Aligned_cols=123 Identities=44% Similarity=0.769 Sum_probs=114.4
Q ss_pred hhhhhCCCEEEcCcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcC-CCCeEEEEecCccccccCHHHHHH
Q psy8667 2 KRIVAAGGWVEFDRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVT-PEWEFVIIACDGIWDVMSNEDVVA 80 (163)
Q Consensus 2 ~RI~~~GG~v~~~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~-~~d~~lvL~SDGl~d~ls~~ei~~ 80 (163)
+||.++||+|..+|++|.|++||||||+.||..+..++.+|+|+++|++..+.+. ++|+|||||||||||+|+++++.+
T Consensus 173 ~RI~~~gg~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~ 252 (382)
T 1a6q_A 173 ERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCD 252 (382)
T ss_dssp HHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHH
T ss_pred HHHHhcCcEEecccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHH
Confidence 6999999999999999999999999999999988888888999999999999998 778899999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCCC
Q psy8667 81 FVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGKP 130 (163)
Q Consensus 81 ~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~~ 130 (163)
++...+....+++.+|+.|++.|+.+++ .||||||||+|...+.
T Consensus 253 ~v~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 253 FVRSRLEVTDDLEKVCNEVVDTCLYKGS------RDNMSVILICFPNAPK 296 (382)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTC------CSCEEEEEEECTTSCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhcCC------cCCEEEEEEEecCCCC
Confidence 9998776567899999999999999987 8999999999986654
No 3
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.95 E-value=4e-28 Score=195.81 Aligned_cols=125 Identities=50% Similarity=0.855 Sum_probs=105.3
Q ss_pred hhhhhCCCEEE-cCcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHH
Q psy8667 2 KRIVAAGGWVE-FDRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVA 80 (163)
Q Consensus 2 ~RI~~~GG~v~-~~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~ 80 (163)
+||+++||+|. .+|++|.+++||||||+.+|.+..+++++++|+++|++..+.+.++|.|||||||||||+|+++++.+
T Consensus 178 ~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~ 257 (304)
T 2i0o_A 178 QRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQ 257 (304)
T ss_dssp HHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHH
T ss_pred HHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHH
Confidence 69999999998 68999999999999999999988888888999999999999999888899999999999999999999
Q ss_pred HHHHHHhc-CCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 81 FVRLKIGE-AMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 81 ~v~~~~~~-~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
++...+.. ..+++.+|+.|++.|+.++....+.+.||||||||+|+
T Consensus 258 ~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 258 FVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 99987655 57899999999999997542100123899999999984
No 4
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.94 E-value=1.8e-27 Score=197.80 Aligned_cols=122 Identities=16% Similarity=0.250 Sum_probs=104.6
Q ss_pred hhhhhCCCEEE--cC--cccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHH
Q psy8667 2 KRIVAAGGWVE--FD--RVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNED 77 (163)
Q Consensus 2 ~RI~~~GG~v~--~~--rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~e 77 (163)
+||+++||+|. ++ ||+|.|++||||||+.+|.....++++|+|+++|+|..+.+.++| |||||||||||+|++++
T Consensus 202 ~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e 280 (377)
T 3d8k_A 202 HRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHA 280 (377)
T ss_dssp HHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHH
T ss_pred HHHHHcCCEEEecCCcEEEcCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHH
Confidence 69999999997 45 899999999999999999998888899999999999999998765 89999999999999999
Q ss_pred HHHHHHHHHh-cCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCCC
Q psy8667 78 VVAFVRLKIG-EAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGKP 130 (163)
Q Consensus 78 i~~~v~~~~~-~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~~ 130 (163)
+++.+...+. ...+++.+|+.|++.|+.+++ .||||||||+|...+.
T Consensus 281 ~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~~~ 328 (377)
T 3d8k_A 281 AIAAAIALYPVSPETVLDAAKAMVVNAKRRKV------TKNISTFVRHLPESRT 328 (377)
T ss_dssp HHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSC------CSCCCEEEEECCSSCC
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHHHhcCC------CCCEEEEEEEecCCcc
Confidence 9886654321 126799999999999999987 9999999999975543
No 5
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.93 E-value=1.2e-25 Score=185.90 Aligned_cols=122 Identities=33% Similarity=0.462 Sum_probs=106.4
Q ss_pred hhhhhCCCEEEcC---cccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccC--HH
Q psy8667 2 KRIVAAGGWVEFD---RVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMS--NE 76 (163)
Q Consensus 2 ~RI~~~GG~v~~~---rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls--~~ 76 (163)
+||+++||+|..+ |++|.|++||||||+.+|....++++++.|+++|++..+.+.++| |||||||||||+++ ++
T Consensus 210 ~rI~~~gG~v~~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~ 288 (364)
T 2isn_A 210 SRIEKAGGSVETFDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWA 288 (364)
T ss_dssp HHHHHTTCCEEESSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHH
T ss_pred HHHHHcCCeEecCCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHH
Confidence 6899999999864 889999999999999999877777777889999999999998765 99999999999976 88
Q ss_pred HHHHHHHHHH-hcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCCC
Q psy8667 77 DVVAFVRLKI-GEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGKP 130 (163)
Q Consensus 77 ei~~~v~~~~-~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~~ 130 (163)
++.+++...+ ....+++.+|+.|++.|+.+++ .||||||||+|...+.
T Consensus 289 ~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~~~ 337 (364)
T 2isn_A 289 YVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNS------QDNISVMLVAFHNQEV 337 (364)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTC------CSCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCC------CCCEEEEEEEcCCCCC
Confidence 9988876543 3346899999999999999987 9999999999975543
No 6
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.93 E-value=6.5e-26 Score=180.33 Aligned_cols=109 Identities=28% Similarity=0.488 Sum_probs=98.4
Q ss_pred hhhhhCCCEEEcC-----cccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCC-CeEEEEecCccccccCH
Q psy8667 2 KRIVAAGGWVEFD-----RVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPE-WEFVIIACDGIWDVMSN 75 (163)
Q Consensus 2 ~RI~~~GG~v~~~-----rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~-d~~lvL~SDGl~d~ls~ 75 (163)
+||+++||+|... |++|.+++||||||+.+|..+ ++++|++..+.+.++ |+|||||||||||++++
T Consensus 150 ~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~--------v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~ 221 (274)
T 2iq1_A 150 ERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNS 221 (274)
T ss_dssp HHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTT--------CBCCCEEEEEECCTTTEEEEEEECHHHHTTCCH
T ss_pred HHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCC--------EEeCCEEEEEEeCCCCCcEEEEEccCcccCCCH
Confidence 5899999999863 688999999999999999755 899999999999864 67999999999999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCC
Q psy8667 76 EDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHG 128 (163)
Q Consensus 76 ~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~ 128 (163)
+++.+++... .+++.+|+.|++.|+.+++ .|||||||++|...
T Consensus 222 ~ei~~~~~~~----~~~~~~a~~L~~~A~~~g~------~DNiTvivv~~~~~ 264 (274)
T 2iq1_A 222 QEICDFVNQC----HDPNEAAHAVTEQAIQYGT------EDNSTAVVVPFGAW 264 (274)
T ss_dssp HHHHHHHHTS----SSHHHHHHHHHHHHHHTTC------CSCEEEEEEECTTC
T ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHHcCC------CCCeEEEEEEccCC
Confidence 9999999864 7899999999999999987 89999999999754
No 7
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-26 Score=190.79 Aligned_cols=125 Identities=18% Similarity=0.276 Sum_probs=103.9
Q ss_pred hhhhhCCCEEEcCcccceeeccccccccccccCCC-----CCCCCCcEEecceEE-EEEcCCCCeEEEEecCccccccC-
Q psy8667 2 KRIVAAGGWVEFDRVNGNLALSRALGDFTFKRNTR-----VSATEQIIISMPDVV-VEKVTPEWEFVIIACDGIWDVMS- 74 (163)
Q Consensus 2 ~RI~~~GG~v~~~rv~g~l~~tRalGD~~~K~~~~-----~~~~~~~v~~~P~i~-~~~~~~~d~~lvL~SDGl~d~ls- 74 (163)
+||+++||+|..+|++|.+ +||||||+.+|.... .+.+++.++++|+|. .+.+.++|+|||||||||||+++
T Consensus 206 ~Ri~~~Gg~v~~~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~ 284 (358)
T 2irm_A 206 ARLFRLGLMAQNFEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHE 284 (358)
T ss_dssp HHHHTTTCCGGGGTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHH
T ss_pred HHHHHcCCeEeccCcCCEE-cccCCcCHHHhccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccc
Confidence 6999999999999999988 999999999885321 123556899999999 49999889999999999999999
Q ss_pred ---------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC-----------CCCCCCCCCCceEEEEEecC
Q psy8667 75 ---------NEDVVAFVRLKIGEAMEPEKICEELMTRCLAPD-----------RELCGLGCDNMTVVLVCFLH 127 (163)
Q Consensus 75 ---------~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~-----------~~~~~~~~DNiTvivv~l~~ 127 (163)
++++++++...+..+.+++.+|+.|++.|++++ ...+|.+.||||||||+|..
T Consensus 285 ~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 285 IFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred cccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 999999999887777899999999999997621 00001138999999999963
No 8
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.93 E-value=4.7e-26 Score=184.77 Aligned_cols=121 Identities=28% Similarity=0.434 Sum_probs=102.6
Q ss_pred ChhhhhCCCEEEc--------Ccccceeeccccccc----cccccCCCCC-CCCCcEEecceEEEEEcCCCCeEEEEecC
Q psy8667 1 MKRIVAAGGWVEF--------DRVNGNLALSRALGD----FTFKRNTRVS-ATEQIIISMPDVVVEKVTPEWEFVIIACD 67 (163)
Q Consensus 1 ~~RI~~~GG~v~~--------~rv~g~l~~tRalGD----~~~K~~~~~~-~~~~~v~~~P~i~~~~~~~~d~~lvL~SD 67 (163)
++||+++||+|.. .+.+|.|++|||||| +.||+.-... .++++|+++|++..+.+.++|+|||||||
T Consensus 187 ~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSD 266 (324)
T 2i44_A 187 KLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATD 266 (324)
T ss_dssp HHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECH
T ss_pred HHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcC
Confidence 3799999999953 146799999999999 6665432211 24577999999999999888779999999
Q ss_pred ccccccCHHHHHHHHHHHHhcCCCHHH--HHHHHHHHHHcCCCCCCCCCCCCceEEEEEecC
Q psy8667 68 GIWDVMSNEDVVAFVRLKIGEAMEPEK--ICEELMTRCLAPDRELCGLGCDNMTVVLVCFLH 127 (163)
Q Consensus 68 Gl~d~ls~~ei~~~v~~~~~~~~~~~~--~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~ 127 (163)
||||+|+++++.+++...+..+.+++. +|+.|++.|+.+++ .||||||||+|..
T Consensus 267 Gl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~------~DNiTvivv~~~~ 322 (324)
T 2i44_A 267 GLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQS------ADNITAMTVFFKK 322 (324)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCC------CCCEEEEEEEEC-
T ss_pred chhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC------CCCCEEEEEEeeC
Confidence 999999999999999988777778999 99999999999887 9999999999963
No 9
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.92 E-value=7.4e-26 Score=185.21 Aligned_cols=114 Identities=32% Similarity=0.460 Sum_probs=100.6
Q ss_pred hhhhhCCCEEEc---CcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHH
Q psy8667 2 KRIVAAGGWVEF---DRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDV 78 (163)
Q Consensus 2 ~RI~~~GG~v~~---~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei 78 (163)
+||+++||+|.. +|++|.|++||||||+.+| +.++++|++..+.+.+.++|||||||||||+++++++
T Consensus 199 ~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~---------~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei 269 (337)
T 3qn1_B 199 ARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLK---------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 269 (337)
T ss_dssp HHHHHTTCCEEESSSEEETTTBSCSBCEECGGGT---------TTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHH
T ss_pred HHHHHcCCeEEecCCceecCcccccccccccccc---------CCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHH
Confidence 699999999985 5999999999999999998 5689999999999988888999999999999999999
Q ss_pred HHHHHHHHhc-----------------CCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCCC
Q psy8667 79 VAFVRLKIGE-----------------AMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGKP 130 (163)
Q Consensus 79 ~~~v~~~~~~-----------------~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~~ 130 (163)
.+++...+.. ..+++.+|+.|++.|+.+++ .||||||||+|...+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~l~~~~~ 332 (337)
T 3qn1_B 270 CEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGS------KDNISIIVIDLKAQRK 332 (337)
T ss_dssp HHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTC------CSCEEEEEEECCSCC-
T ss_pred HHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCC------CCCEEEEEEEecCCcc
Confidence 9999874321 24578999999999999997 9999999999975543
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.92 E-value=7.4e-26 Score=189.27 Aligned_cols=127 Identities=15% Similarity=0.245 Sum_probs=104.7
Q ss_pred hhhhhCCCEEE---cCcccceeeccccccccccccCCCC-----CCCCCcEEecceEEE-EEcCCCCeEEEEecCccccc
Q psy8667 2 KRIVAAGGWVE---FDRVNGNLALSRALGDFTFKRNTRV-----SATEQIIISMPDVVV-EKVTPEWEFVIIACDGIWDV 72 (163)
Q Consensus 2 ~RI~~~GG~v~---~~rv~g~l~~tRalGD~~~K~~~~~-----~~~~~~v~~~P~i~~-~~~~~~d~~lvL~SDGl~d~ 72 (163)
+||+++||+|. ..|++|.|++||||||+.+|.+... .++++.++++|+|.. +.+.++|+|||||||||||+
T Consensus 216 ~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~ 295 (401)
T 2j4o_A 216 FRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKA 295 (401)
T ss_dssp HHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHH
T ss_pred HHHHHcCCCeeeccCccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhc
Confidence 69999999974 3689999999999999999865321 244577999999995 99998888999999999999
Q ss_pred c--------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-------CCCC--CCCCCCCCceEEEEEecCC
Q psy8667 73 M--------SNEDVVAFVRLKIGEAMEPEKICEELMTRCLA-------PDRE--LCGLGCDNMTVVLVCFLHG 128 (163)
Q Consensus 73 l--------s~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~-------~~~~--~~~~~~DNiTvivv~l~~~ 128 (163)
| +++++++++...+.++.+++.+|+.|++.|++ +++. ....+.||||||||+|...
T Consensus 296 l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~ 368 (401)
T 2j4o_A 296 LEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP 368 (401)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred ccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence 9 89999999998776668999999999999986 3310 0011279999999999754
No 11
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.92 E-value=2.5e-25 Score=180.36 Aligned_cols=113 Identities=36% Similarity=0.484 Sum_probs=98.9
Q ss_pred hhhhhCCCEEEc---CcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHH
Q psy8667 2 KRIVAAGGWVEF---DRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDV 78 (163)
Q Consensus 2 ~RI~~~GG~v~~---~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei 78 (163)
+||+++||++.. +|++|.|++||+|||+.+| +.++++|++..+.+.+.++|||||||||||+++++++
T Consensus 170 ~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~---------~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei 240 (316)
T 3kdj_B 170 ARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLK---------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEA 240 (316)
T ss_dssp HHHHHTTCCEEESSSEEETTTBSCSBCEECGGGT---------TTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHH
T ss_pred HHHHHcCCeEEecCCceEcceeccccccCccccC---------CCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHH
Confidence 699999999975 5999999999999999998 5689999999998777788999999999999999999
Q ss_pred HHHHHHHHh-----------------------cCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCC
Q psy8667 79 VAFVRLKIG-----------------------EAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGK 129 (163)
Q Consensus 79 ~~~v~~~~~-----------------------~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~ 129 (163)
.+++...+. ...+++.+|+.|++.|+.+++ .||||||||++...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~------~DNiTvivv~l~~~~ 308 (316)
T 3kdj_B 241 CEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGS------KDNISVVVVDLKPRR 308 (316)
T ss_dssp HHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTC------CSCEEEEEEECSCC-
T ss_pred HHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCC------CCCeEEEEEEccCCC
Confidence 999987431 013578999999999999997 999999999997543
No 12
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.91 E-value=7.9e-25 Score=186.29 Aligned_cols=125 Identities=26% Similarity=0.450 Sum_probs=97.8
Q ss_pred hhhhhCCC------EEEcCcccceeeccccccccccccCCC------------------------CCCCCCcEEecceEE
Q psy8667 2 KRIVAAGG------WVEFDRVNGNLALSRALGDFTFKRNTR------------------------VSATEQIIISMPDVV 51 (163)
Q Consensus 2 ~RI~~~GG------~v~~~rv~g~l~~tRalGD~~~K~~~~------------------------~~~~~~~v~~~P~i~ 51 (163)
+||+++|+ .+..+|++|.|++||||||+.||++.. ...++|+++++|+|.
T Consensus 252 ~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~ 331 (467)
T 2pnq_A 252 QRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVT 331 (467)
T ss_dssp HHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEE
T ss_pred HHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEE
Confidence 69999985 445689999999999999999996421 122467899999999
Q ss_pred EEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcC--CCH------------------------------HHHHHHH
Q psy8667 52 VEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEA--MEP------------------------------EKICEEL 99 (163)
Q Consensus 52 ~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~--~~~------------------------------~~~a~~L 99 (163)
.+.+.++|.|||||||||||+|+++++++++...+... .+| +.+|..|
T Consensus 332 ~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~L 411 (467)
T 2pnq_A 332 YHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHL 411 (467)
T ss_dssp EEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHH
T ss_pred EEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHH
Confidence 99999999999999999999999999999999876321 122 5679999
Q ss_pred HHHHHcCCCC-----------------CCCCCCCCceEEEEEec
Q psy8667 100 MTRCLAPDRE-----------------LCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 100 ~~~A~~~~~~-----------------~~~~~~DNiTvivv~l~ 126 (163)
++.|+..+.. ..+..+||||||||+|.
T Consensus 412 ir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~ 455 (467)
T 2pnq_A 412 IRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFN 455 (467)
T ss_dssp HHHHHC-------------------------CCSCEEEEEEEEC
T ss_pred HHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeC
Confidence 9999987510 01234899999999996
No 13
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.91 E-value=1.3e-24 Score=181.04 Aligned_cols=110 Identities=27% Similarity=0.480 Sum_probs=99.7
Q ss_pred hhhhhCCCEEEc-----CcccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCC-CCeEEEEecCccccccCH
Q psy8667 2 KRIVAAGGWVEF-----DRVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTP-EWEFVIIACDGIWDVMSN 75 (163)
Q Consensus 2 ~RI~~~GG~v~~-----~rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~-~d~~lvL~SDGl~d~ls~ 75 (163)
+||+++||.|.. .|++|.+++||||||+.+|..+ ++++|++..+.+.. +++|||||||||||+|++
T Consensus 264 ~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~--------v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~ 335 (389)
T 4da1_A 264 ERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNS 335 (389)
T ss_dssp HHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGT--------CBCCCEEEEEECCSSSCEEEEEECHHHHTTCCH
T ss_pred HHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCC--------CCCCCceEEEEEcCCCCcEEEEEeCCcccCCCH
Confidence 699999999985 4889999999999999999755 89999999999985 478999999999999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEecCCC
Q psy8667 76 EDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFLHGK 129 (163)
Q Consensus 76 ~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~~~ 129 (163)
+++.+++... .+++.+|+.|++.|+.+++ .||||||||+|....
T Consensus 336 ~ei~~il~~~----~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~~ 379 (389)
T 4da1_A 336 QEICDFVNQC----HDPNEAAHAVTEQAIQYGT------EDNSTAVVVPFGAWG 379 (389)
T ss_dssp HHHHHHHHHS----SSHHHHHHHHHHHHHHHTC------CSCEEEEEEEECCC-
T ss_pred HHHHHHHHhc----CCHHHHHHHHHHHHHHcCC------CCCeEEEEEEecCCC
Confidence 9999999875 7899999999999999987 899999999997554
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.74 E-value=1.4e-18 Score=135.54 Aligned_cols=87 Identities=20% Similarity=0.299 Sum_probs=76.0
Q ss_pred ccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcCCCHHHH
Q psy8667 16 VNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEAMEPEKI 95 (163)
Q Consensus 16 v~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~ 95 (163)
..+.+.+||+||++. .++|++..+.+.++| +||||||||||+++++++.+++... .+++.+
T Consensus 161 ~~~~~~ltralG~~~--------------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~~----~~~~~~ 221 (250)
T 2pk0_A 161 HPQKNIITQSIGQAN--------------PVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQE----KTLDDK 221 (250)
T ss_dssp CCSCCCBSCCBSCSS--------------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTSS----SCHHHH
T ss_pred CCCcceEEeecCCCC--------------CccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhcC----CCHHHH
Confidence 356789999999762 468999999888765 8999999999999999999998753 689999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCceEEEEEecC
Q psy8667 96 CEELMTRCLAPDRELCGLGCDNMTVVLVCFLH 127 (163)
Q Consensus 96 a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~~ 127 (163)
|+.|++.|+.+++ .||||+||+++..
T Consensus 222 a~~L~~~a~~~g~------~DniTvivv~~~~ 247 (250)
T 2pk0_A 222 NQDLITLANHRGG------LDNITVALVYVES 247 (250)
T ss_dssp HHHHHHHHHHTTC------CSCEEEEEEEECC
T ss_pred HHHHHHHHHHcCC------CCCeEEEEEEeeC
Confidence 9999999999887 8999999999963
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.74 E-value=2.9e-18 Score=132.77 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=73.0
Q ss_pred hhhhCCCEEEcC--cccceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHH
Q psy8667 3 RIVAAGGWVEFD--RVNGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVA 80 (163)
Q Consensus 3 RI~~~GG~v~~~--rv~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~ 80 (163)
+++++|+..... +..+.+.+||+||+. ..++|++..+.+.++| +||||||||||+++++++.+
T Consensus 142 ~~~~~g~i~~~~~~~~~~~~~ltralG~~--------------~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~ 206 (240)
T 2j82_A 142 QAVQLGSLTIEQARQHPWRHVLSQCLGRE--------------DLSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISI 206 (240)
T ss_dssp HC----------------CCCBSCCBSCT--------------TCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHH
T ss_pred HHHHcCCCCHHHHhcCCCcCeEeecCCCC--------------CceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHH
Confidence 345555544332 345778999999975 2468999999888765 69999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEe
Q psy8667 81 FVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCF 125 (163)
Q Consensus 81 ~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l 125 (163)
++. . .+++.+|+.|++.|+.+++ .||||+||+++
T Consensus 207 ~l~-~----~~~~~~a~~l~~~a~~~g~------~DniTvivv~~ 240 (240)
T 2j82_A 207 YLS-E----PNVQKAAAALVDAAKTHGG------RDNVTVVVISV 240 (240)
T ss_dssp HHT-C----SSHHHHHHHHHHHHHHTTC------CSCEEEEEEEC
T ss_pred HHc-c----CCHHHHHHHHHHHHHHcCC------CCCeEEEEEeC
Confidence 987 2 7899999999999999886 89999999975
No 16
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.72 E-value=7.5e-18 Score=130.12 Aligned_cols=83 Identities=24% Similarity=0.254 Sum_probs=72.2
Q ss_pred cceeeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcCCCHHHHH
Q psy8667 17 NGNLALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEAMEPEKIC 96 (163)
Q Consensus 17 ~g~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a 96 (163)
.+.+.+||+||+. ...+|++..+.+.++| +||||||||||+++++++.+++ .. .+++.+|
T Consensus 151 ~~~~~~tralG~~--------------~~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~~----~~~~~~a 210 (234)
T 2jfr_A 151 PQRHLLTRALGIG--------------PHIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-TS----PDPQVAV 210 (234)
T ss_dssp TTTTCBSCCBSSS--------------SCCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-TC----SSHHHHH
T ss_pred cccceeeecCcCC--------------CCceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-cc----CCHHHHH
Confidence 4678899999975 2468888888777665 7899999999999999999998 43 7899999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCceEEEEEe
Q psy8667 97 EELMTRCLAPDRELCGLGCDNMTVVLVCF 125 (163)
Q Consensus 97 ~~L~~~A~~~~~~~~~~~~DNiTvivv~l 125 (163)
+.|++.|+.++. .||||+|++++
T Consensus 211 ~~l~~~a~~~g~------~DniTvivv~~ 233 (234)
T 2jfr_A 211 RRLVEVANDAGG------SDNTTVVVIDL 233 (234)
T ss_dssp HHHHHHHHHTTC------CSCEEEEEEEE
T ss_pred HHHHHHHHHcCC------CCCeEEEEEEe
Confidence 999999999886 89999999987
No 17
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.67 E-value=9.5e-17 Score=124.12 Aligned_cols=80 Identities=21% Similarity=0.264 Sum_probs=69.5
Q ss_pred eeccccccccccccCCCCCCCCCcEEecceEEEEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8667 20 LALSRALGDFTFKRNTRVSATEQIIISMPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEAMEPEKICEEL 99 (163)
Q Consensus 20 l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~L 99 (163)
..+||+||+. .++|++..+.+.++| +||||||||||+++++++.+++.. .+++.+|+.|
T Consensus 157 ~~~tr~lg~~---------------~~~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~~-----~~~~~~a~~L 215 (237)
T 1txo_A 157 SLIMRALTGH---------------EVEPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQI-----PEVAESAHRL 215 (237)
T ss_dssp TCBCCCBSSS---------------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS-----SSHHHHHHHH
T ss_pred cceeeccCCC---------------CccceEEEEecCCCC-EEEEECCCCCCCCCHHHHHHHHhc-----CCHHHHHHHH
Confidence 4578888842 368899999998766 679999999999999999999863 5899999999
Q ss_pred HHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 100 MTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 100 ~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
++.|+.+++ .|||||||++|.
T Consensus 216 ~~~a~~~g~------~DniTvivv~~~ 236 (237)
T 1txo_A 216 IELALRGGG------PDNVTVVVADLE 236 (237)
T ss_dssp HHHHHHTTC------CSCEEEEEEEEE
T ss_pred HHHHHHcCC------CCCeEEEEEEee
Confidence 999999987 899999999985
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.54 E-value=3.9e-16 Score=119.47 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=58.2
Q ss_pred eeeccccccccccccCCCCCCCCCcEEecceE--EEEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcCCCHHHHH
Q psy8667 19 NLALSRALGDFTFKRNTRVSATEQIIISMPDV--VVEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEAMEPEKIC 96 (163)
Q Consensus 19 ~l~~tRalGD~~~K~~~~~~~~~~~v~~~P~i--~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a 96 (163)
...+||+||+.. ..+|++ ..+.+.++| +||||||||||+++++++.+++... .+ |
T Consensus 130 ~~~ltralG~~~--------------~~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~~----~~----a 186 (211)
T 3rnr_A 130 GEMITSFIGIEN--------------LTEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSRG----SD----A 186 (211)
T ss_dssp HHCBSCCBTCSS--------------CCCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECTT----SC----H
T ss_pred ccEEecccCCCC--------------CcceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhcC----Ch----H
Confidence 456899999542 246777 667776665 7889999999999999999888653 33 9
Q ss_pred HHHHHHHHcCC--CCCCCCCCCCceEEEEEe
Q psy8667 97 EELMTRCLAPD--RELCGLGCDNMTVVLVCF 125 (163)
Q Consensus 97 ~~L~~~A~~~~--~~~~~~~~DNiTvivv~l 125 (163)
+.|++.|+.++ + .||||+|||+|
T Consensus 187 ~~L~~~a~~~g~~~------~DNiTvivv~L 211 (211)
T 3rnr_A 187 RGILQEVEAQGRPY------QDNATLALVIL 211 (211)
T ss_dssp HHHHHHHHHSCTTS------CSSCEEEEEEC
T ss_pred HHHHHHHHHcCCCC------CCceEEEEEeC
Confidence 99999999988 5 89999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.97 E-value=8.5e-10 Score=85.24 Aligned_cols=75 Identities=24% Similarity=0.305 Sum_probs=54.5
Q ss_pred eEEEEEcCCCCeEEEEecCccccccC-----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEE
Q psy8667 49 DVVVEKVTPEWEFVIIACDGIWDVMS-----NEDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLV 123 (163)
Q Consensus 49 ~i~~~~~~~~d~~lvL~SDGl~d~ls-----~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv 123 (163)
+...+.+.++| .|+||||||||.++ ...+.+++... ...+++++++.|++.+...... ...||+|++++
T Consensus 144 ~~~~~~l~~GD-~lll~SDGl~e~~~~~~~~~~~~~~ll~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~DDiTvv~i 217 (242)
T 3t91_A 144 EVVSEQLKAGD-LLIMMSDGIFEGPKHVENHDLWMKRKMKGL--KTNDPQEIADLLMEEVIRTRSG---QIEDDMTVVVV 217 (242)
T ss_dssp EEEEEECCTTC-EEEEECHHHHTCSTTCSCHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHTTS---CCCSCEEEEEE
T ss_pred eEEEEEeCCCC-EEEEECCCcccCCCcccchHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHcCC---CCCCceEEEEE
Confidence 34445555555 79999999999998 45555555431 2378999999999999876531 13699999999
Q ss_pred EecCCC
Q psy8667 124 CFLHGK 129 (163)
Q Consensus 124 ~l~~~~ 129 (163)
++....
T Consensus 218 ~~~~~~ 223 (242)
T 3t91_A 218 RIDHNT 223 (242)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 997543
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.87 E-value=2e-09 Score=83.64 Aligned_cols=74 Identities=26% Similarity=0.265 Sum_probs=53.0
Q ss_pred ceEEEEEcCCCCeEEEEecCccccccC-------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceE
Q psy8667 48 PDVVVEKVTPEWEFVIIACDGIWDVMS-------NEDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTV 120 (163)
Q Consensus 48 P~i~~~~~~~~d~~lvL~SDGl~d~ls-------~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTv 120 (163)
++...+.+.++| .|+||||||+|..+ .+++..++.. ...+++++++.|++.+.....+ ...||+|+
T Consensus 146 ~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~---~~~~~~~~~~~l~~~~~~~~~~---~~~DDiTv 218 (242)
T 3pu9_A 146 PRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEFLATGGRVAG---PETPAQAIADELLEAALVADDG---RAGDDMTV 218 (242)
T ss_dssp CEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCHHHHHHHHCC---TTCCHHHHHHHHHHHHHHHTTT---SCSSCEEE
T ss_pred ceEEEEEeCCCC-EEEEECcCcccCCCCccccccHHHHHHHHhc---cCCCHHHHHHHHHHHHHHhcCC---CCCCCeEE
Confidence 444555665555 79999999998765 3666433221 2368999999999999876531 23899999
Q ss_pred EEEEecCC
Q psy8667 121 VLVCFLHG 128 (163)
Q Consensus 121 ivv~l~~~ 128 (163)
+++++...
T Consensus 219 lvv~~~~~ 226 (242)
T 3pu9_A 219 VVLRLRNV 226 (242)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 99999644
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.69 E-value=1.3e-08 Score=76.50 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=49.5
Q ss_pred cceEEEEEcCCCCeEEEEecCccccccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEE
Q psy8667 47 MPDVVVEKVTPEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVC 124 (163)
Q Consensus 47 ~P~i~~~~~~~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~ 124 (163)
.++...+.+.++| .|+|+||||++.++.+++..++ ..+++++|+.|++.+. + . .||+|++|++
T Consensus 131 ~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~------~~~~~~~a~~l~~~~~-~-~------~Dd~tvlv~r 193 (193)
T 3zt9_A 131 QLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLANY------RLTAEELVRLIGEKYG-R-R------DDDVAVIVAR 193 (193)
T ss_dssp SCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGGCT------TSCHHHHHHHHHHHHC-C-T------TSCEEEEEEC
T ss_pred cceeEEeccCCCC-EEEEECCCCCCccChhhhhchh------cCCHHHHHHHHHHHhC-c-C------CCCeEEEEEC
Confidence 3445566666655 7999999999999998876654 2689999999999973 2 2 8999999975
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.64 E-value=2e-08 Score=78.13 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=42.6
Q ss_pred EEEcCCCCeEEEEecCccccccCHHH-------HHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEE
Q psy8667 52 VEKVTPEWEFVIIACDGIWDVMSNED-------VVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVC 124 (163)
Q Consensus 52 ~~~~~~~d~~lvL~SDGl~d~ls~~e-------i~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~ 124 (163)
.+.+ +.++.|+||||||++.++.++ +.+++... ..+++.+++.|. .+...+. .||||+++++
T Consensus 183 ~~~l-~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~---~~~~~~~~~~l~-~~~~~~~------~DDiTvl~v~ 251 (255)
T 3f79_A 183 VMEL-PPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA---GGTLDGLRQVFG-LANLAEM------PDDIALLVLS 251 (255)
T ss_dssp --BC-CSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH---SCSSHHHHHHC------CCS------SSCEEEEEEE
T ss_pred EEEE-CCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc---CCCHHHHHHHHH-hccCCCC------CCCEEEEEEE
Confidence 3344 445689999999999998877 88887654 146788888876 3433333 8999999998
Q ss_pred ec
Q psy8667 125 FL 126 (163)
Q Consensus 125 l~ 126 (163)
..
T Consensus 252 ~~ 253 (255)
T 3f79_A 252 RN 253 (255)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=97.80 E-value=0.0001 Score=61.04 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=42.9
Q ss_pred eEEEEEcCCCCeEEEEecCccccccCH------HHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHc----CCCCCCCC
Q psy8667 49 DVVVEKVTPEWEFVIIACDGIWDVMSN------EDVVAFVRLKIGEA-----MEPEKICEELMTRCLA----PDRELCGL 113 (163)
Q Consensus 49 ~i~~~~~~~~d~~lvL~SDGl~d~ls~------~ei~~~v~~~~~~~-----~~~~~~a~~L~~~A~~----~~~~~~~~ 113 (163)
+...+.+.++| .|+|+||||+|.... +.+.+++....... .+++..++.|++.++. ...
T Consensus 171 ~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----- 244 (399)
T 3ke6_A 171 PVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTG----- 244 (399)
T ss_dssp CCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHTTC-----
T ss_pred eeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCC-----
Confidence 33455665555 789999999998765 44555554421110 0233344444444433 222
Q ss_pred CCCCceEEEEEecCC
Q psy8667 114 GCDNMTVVLVCFLHG 128 (163)
Q Consensus 114 ~~DNiTvivv~l~~~ 128 (163)
..||||++++++...
T Consensus 245 ~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 245 YNDDVTLLAMQRRAP 259 (399)
T ss_dssp CSSCEEEEEEEECCC
T ss_pred CCCceEEEEEEeeCC
Confidence 289999999999753
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=96.13 E-value=0.0013 Score=53.58 Aligned_cols=64 Identities=16% Similarity=0.176 Sum_probs=31.9
Q ss_pred EEEcCCCCeEEEEecCccccccCH-------HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEE
Q psy8667 52 VEKVTPEWEFVIIACDGIWDVMSN-------EDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVC 124 (163)
Q Consensus 52 ~~~~~~~d~~lvL~SDGl~d~ls~-------~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~ 124 (163)
.+.+.++| .|+|.||||+|.... +.+.+++... ... .+.|.+.....+ .+...||||+++++
T Consensus 322 ~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~---~~~----~~~l~~~~~~~~---~~~~~DDit~l~i~ 390 (394)
T 3eq2_A 322 VMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAA---GGT----LDGLRQVFGLAN---LAEMPDDIALLVLS 390 (394)
T ss_dssp EEECCSSC-EEEECSSCCCC-----CCSTTTTTSHHHHHTT---C------CHHHHHHHSCCC---SCC--CCCEEEEEC
T ss_pred EEEeCCCC-EEEEECCCcccccCcccchhhHHHHHHHHHhc---chh----HHHHHHHhcccC---CCCCCCceEEEEEe
Confidence 44554554 799999999998543 3344444431 122 333433332222 12247999999998
Q ss_pred ec
Q psy8667 125 FL 126 (163)
Q Consensus 125 l~ 126 (163)
..
T Consensus 391 ~~ 392 (394)
T 3eq2_A 391 RN 392 (394)
T ss_dssp --
T ss_pred cc
Confidence 74
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=71.07 E-value=0.097 Score=44.85 Aligned_cols=55 Identities=5% Similarity=-0.124 Sum_probs=42.1
Q ss_pred EEEecCccccccCHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEE----EEEe
Q psy8667 62 VIIACDGIWDVMSNEDVVAFVRLKIG-EAMEPEKICEELMTRCLAPDRELCGLGCDNMTVV----LVCF 125 (163)
Q Consensus 62 lvL~SDGl~d~ls~~ei~~~v~~~~~-~~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvi----vv~l 125 (163)
+++++ |+++...++.+++...-. ...+.+..++.|++.++..++ .||++.+ +...
T Consensus 75 f~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~------~d~~~~~~~~~v~~v 134 (543)
T 3c4z_A 75 FLRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQA------QLFCSFLDAETVARA 134 (543)
T ss_dssp HHHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTC------TTCCTTSCHHHHHHH
T ss_pred HHhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchh------hhhhccCCHHHHhhh
Confidence 34555 899999888888876421 224788899999999999998 8999998 5554
No 26
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=70.21 E-value=15 Score=23.93 Aligned_cols=52 Identities=8% Similarity=0.112 Sum_probs=41.5
Q ss_pred CCCeEEEEecCccccccCHHHHHHHHHHHHhcC------------CCHHHHHHHHHHHHHcCCC
Q psy8667 57 PEWEFVIIACDGIWDVMSNEDVVAFVRLKIGEA------------MEPEKICEELMTRCLAPDR 108 (163)
Q Consensus 57 ~~d~~lvL~SDGl~d~ls~~ei~~~v~~~~~~~------------~~~~~~a~~L~~~A~~~~~ 108 (163)
+.|.|+||-++===.++|.+|+..-+...+..- .+.++.|+.|++.+++..-
T Consensus 8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~CELei 71 (94)
T 2krx_A 8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTSCELDV 71 (94)
T ss_dssp CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHCCCEEE
T ss_pred ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHheeeeee
Confidence 567788888866667899999999998877643 4678999999999987654
No 27
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=44.86 E-value=65 Score=21.31 Aligned_cols=56 Identities=11% Similarity=0.095 Sum_probs=41.0
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
.||-|-+.++..++.+.+.+..... .-.+.+|+.+.+..+.... -.-+++-|-+..
T Consensus 47 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~------v~~v~V~v~Kp~ 104 (120)
T 1b9l_A 47 TSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHW------VTYAEVEIDKLH 104 (120)
T ss_dssp GGGTCSSCCCHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHTCSTT------CSEEEEEEEEET
T ss_pred ccCCcccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCC------ceEEEEEEECCC
Confidence 3788899999999999998876543 6789999999998765322 344555555553
No 28
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=41.35 E-value=85 Score=21.62 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=40.5
Q ss_pred cCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 66 CDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 66 SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
||-|-+.++..++.+.+.+..... .-.+.+|+.+.+..+.... -..++|-|-+..
T Consensus 66 sDdl~~tvdY~~v~~~I~~~v~~~~~~LlE~lAe~Ia~~il~~~~------v~~v~V~V~Kp~ 122 (143)
T 3v9o_A 66 EDKLREVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLLAHDA------VRAVRVSTEKPD 122 (143)
T ss_dssp SCCGGGSCCTHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHSSTT------CCEEEEEEEETT
T ss_pred CccchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCC------ccEEEEEEECCC
Confidence 566778889999999998876642 6789999999999987532 455555555554
No 29
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=36.74 E-value=1.1e+02 Score=21.53 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=35.7
Q ss_pred EecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEe
Q psy8667 64 IACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCF 125 (163)
Q Consensus 64 L~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l 125 (163)
-.||-|-+.++..++.+.+.+..... .-.+.+|+.+++..+.... -.-++|-|-+.
T Consensus 82 ~~sDdL~dTvdY~~v~~~I~~~v~~~~f~LIEtLAe~Ia~~ll~~~~------v~~V~V~V~KP 139 (156)
T 4aey_A 82 VEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPA------VRYAEVEVDKP 139 (156)
T ss_dssp -------CCCHHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHHHSCC------CSEEEEEEEEE
T ss_pred cccCcchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHhcCC------ccEEEEEEECC
Confidence 45788888999999999888876543 6789999999998775432 45555555554
No 30
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.10 E-value=36 Score=22.17 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=28.9
Q ss_pred cEEecceEEEEEcC--CCCeEEEEecCccccccCHHHHHHHHHHH
Q psy8667 43 IIISMPDVVVEKVT--PEWEFVIIACDGIWDVMSNEDVVAFVRLK 85 (163)
Q Consensus 43 ~v~~~P~i~~~~~~--~~d~~lvL~SDGl~d~ls~~ei~~~v~~~ 85 (163)
++...+.+..+... ... -+|+-+.|+.+.++++|+..++...
T Consensus 47 ~v~~~~~~NAf~~g~~~~~-~~i~v~~gLl~~l~~~El~aVlaHE 90 (107)
T 3cqb_A 47 AIYDSADINAFATGAKRDD-SLVAVSTGLLHNMTRDEAEAVLAHE 90 (107)
T ss_dssp EEECCSSEEEEEECCC--C-CEEEEEHHHHHHSCHHHHHHHHHHH
T ss_pred EEEECCCcCEEEEecCCCC-CEEEEcHHHHhhCCHHHHHHHHHHH
Confidence 35555555555554 222 3578889999999999999998764
No 31
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=35.97 E-value=1.1e+02 Score=21.20 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=40.7
Q ss_pred cCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 66 CDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 66 SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
||-+-+.++..++.+.+.+..... .-.+.+|+.+++..+..-. .-.-++|-|-+..
T Consensus 64 sDdl~~tvdY~~v~~~I~~~v~~~~f~LiE~lA~~Ia~~il~~fp-----~v~~v~V~V~Kp~ 121 (146)
T 1sql_A 64 SDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKFH-----QINAVRVKLSKPN 121 (146)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHHCT-----TCCEEEEEEEESS
T ss_pred ccCchhccCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHCC-----CceEEEEEEECCc
Confidence 688999999999999999876543 5688999999999887421 0344555555543
No 32
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=35.21 E-value=1e+02 Score=21.27 Aligned_cols=42 Identities=24% Similarity=0.311 Sum_probs=34.1
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcC
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAP 106 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~ 106 (163)
.||-+-+.++..++.+.+.+..... .-.+.+|+.+++..+..
T Consensus 67 ~sDdl~~tvdY~~v~~~I~~~v~~~~f~LlE~LAe~Ia~~ll~~ 110 (143)
T 3r2e_A 67 GSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRR 110 (143)
T ss_dssp TCCCTTSSCCHHHHHHHHHHHHHSSEESCHHHHHHHHHHHHHHH
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHh
Confidence 3677888999999999999876643 67889999999988864
No 33
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=34.73 E-value=98 Score=20.40 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=34.8
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHc
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLA 105 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~ 105 (163)
.||-+-+.++..++.+.+.+..... .-.+.+|+.+.+..+.
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~ 86 (119)
T 1nbu_A 44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD 86 (119)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHT
T ss_pred ccccchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHhc
Confidence 4788999999999999998876543 5688999999999987
No 34
>1z9w_A DHNA, dihydroneopterin aldolase; FOLB, structural genomics, TB ST genomics; 2.50A {Mycobacterium tuberculosis H37RV} SCOP: d.96.1.3
Probab=34.50 E-value=1.1e+02 Score=20.76 Aligned_cols=56 Identities=11% Similarity=0.079 Sum_probs=41.1
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEEec
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPDRELCGLGCDNMTVVLVCFL 126 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv~l~ 126 (163)
.||-|-+.++..++.+.+.+..... .-.+.+|+.+.+..+. ... -.-+++-|-+..
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~il~-~~~-----v~~v~V~v~Kp~ 101 (133)
T 1z9w_A 44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD-DQR-----VHAVEVAVHKPQ 101 (133)
T ss_dssp GCSSHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHH-STT-----EEEEEEEEEEEC
T ss_pred cccCchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhc-CCC-----ccEEEEEEECCC
Confidence 4788889999999999998876543 5688999999999987 420 344555555554
No 35
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=34.33 E-value=1e+02 Score=20.41 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=34.8
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcC
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAP 106 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~ 106 (163)
.||-+-+.++..++.+.+.+..... .-.+.+|+.+.+..+..
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~ 87 (121)
T 1dhn_A 44 RTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQ 87 (121)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHH
T ss_pred ccCCccceeCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Confidence 4788999999999999999876543 56889999999988864
No 36
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=33.08 E-value=1.4e+02 Score=21.74 Aligned_cols=58 Identities=29% Similarity=0.352 Sum_probs=41.1
Q ss_pred cEEecceEEEEEcC---C--CCeEEEEecCcc--cc-ccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q psy8667 43 IIISMPDVVVEKVT---P--EWEFVIIACDGI--WD-VMSNEDVVAFVRLKIGEAMEPEKICEELMTRCL 104 (163)
Q Consensus 43 ~v~~~P~i~~~~~~---~--~d~~lvL~SDGl--~d-~ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~ 104 (163)
+++++|++.++-.. + ++.|.|+-|||- |. .++.++|-+..... ++..+.-.+.|.. |+
T Consensus 38 ~~~sep~~~yfLqvsW~~~lgsGF~i~LTDGqSaW~G~VS~~~Is~eAd~m---~Me~e~YV~eL~K-AL 103 (186)
T 3q4f_C 38 HLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM---AMEKGKYVGELRK-AL 103 (186)
T ss_dssp EETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT---TCCHHHHHHHHHH-HH
T ss_pred eecCCCCccEEEEEEeccCCCcceEEEEeCCcceeeeEECHHHHHHHHHHh---cCcHHHHHHHHHH-HH
Confidence 47788988865332 3 367999999996 43 68899998888763 3667777776655 44
No 37
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=32.90 E-value=1.1e+02 Score=20.59 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=35.0
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCC
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPD 107 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~ 107 (163)
.||-|-+.++..++.+.+.+..... .-.+.+|+.+.+..+...
T Consensus 58 ~sDdl~~tvdY~~v~~~I~~~v~~~~~~LiE~lA~~Ia~~ll~~~ 102 (132)
T 3o1k_A 58 KSDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRF 102 (132)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHTCEESCHHHHHHHHHHHHHHHH
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhC
Confidence 4678889999999999999876643 678899999999887653
No 38
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=31.37 E-value=1.1e+02 Score=20.15 Aligned_cols=43 Identities=26% Similarity=0.249 Sum_probs=35.0
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcCC
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAPD 107 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~ 107 (163)
.||-+-+.++..++.+.+.+..... .-.+.+|+.+.+..+...
T Consensus 43 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~ 87 (122)
T 2o90_A 43 KSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARF 87 (122)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTTCEESCHHHHHHHHHHHHHHHS
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhhC
Confidence 4678889999999999999876543 678899999999888643
No 39
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=28.75 E-value=1.7e+02 Score=21.19 Aligned_cols=72 Identities=26% Similarity=0.281 Sum_probs=47.0
Q ss_pred cEEecceEEEEEcC---C--CCeEEEEecCcc--c-cccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCCCCCC
Q psy8667 43 IIISMPDVVVEKVT---P--EWEFVIIACDGI--W-DVMSNEDVVAFVRLKIGEAMEPEKICEELMTRCLAPDRELCGLG 114 (163)
Q Consensus 43 ~v~~~P~i~~~~~~---~--~d~~lvL~SDGl--~-d~ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~~~~~~ 114 (163)
+++++|.+.+|-.. + ++.|.|+-|||- | ..+|.++|-+..... ++..+.-.+.|...-..... .
T Consensus 12 ~~~s~p~~~yfL~v~w~~~l~~gf~i~ltDG~saW~g~Vs~~~i~~eA~~~---~me~e~Yv~el~kAl~~~~~-----~ 83 (175)
T 3mud_A 12 HLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM---AMEKGKYVGELRKALLSGAG-----P 83 (175)
T ss_dssp EETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT---TCCHHHHHHHHHHHHTTCCC-----T
T ss_pred eecCCCCceEEEEEeccccCCcceEEEEeCCcceeeeeeCHHHHHHHHHHh---cCcHHHHHHHHHHHHhcCCC-----C
Confidence 37789988865332 3 367999999996 4 358899998888763 36777777777554323322 1
Q ss_pred CCCceEEE
Q psy8667 115 CDNMTVVL 122 (163)
Q Consensus 115 ~DNiTviv 122 (163)
.+|.+..+
T Consensus 84 ~~~~~f~~ 91 (175)
T 3mud_A 84 ADVYTFNF 91 (175)
T ss_dssp TCCEEEEE
T ss_pred CcceEEec
Confidence 45555444
No 40
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=27.34 E-value=20 Score=21.89 Aligned_cols=13 Identities=31% Similarity=0.366 Sum_probs=10.9
Q ss_pred ChhhhhCCCEEEc
Q psy8667 1 MKRIVAAGGWVEF 13 (163)
Q Consensus 1 ~~RI~~~GG~v~~ 13 (163)
++||.+.||+|..
T Consensus 40 mQrI~r~GGkIvS 52 (67)
T 1b33_N 40 QQRIQKMGGKIVK 52 (67)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHcCCeEEE
Confidence 3799999999964
No 41
>2z3b_A ATP-dependent protease HSLV; N-terminal nucleophIle hydrolase; 2.50A {Bacillus subtilis} SCOP: d.153.1.4 PDB: 2z3a_A 1yyf_D* 3ty6_A
Probab=24.37 E-value=1.7e+02 Score=20.46 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhc---CCCHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEE
Q psy8667 76 EDVVAFVRLKIGE---AMEPEKICEELMTRCLAPDRELCGLGCDNMTVVLV 123 (163)
Q Consensus 76 ~ei~~~v~~~~~~---~~~~~~~a~~L~~~A~~~~~~~~~~~~DNiTvivv 123 (163)
+.+..++...+.. +.+.++++++-+..|.++... ..+|+.+.+|
T Consensus 133 ~~a~~~le~~~~~~~~~mt~eel~~~al~~a~~rd~~----sg~~i~v~~i 179 (180)
T 2z3b_A 133 NYALAAGRALKKHAGESMSASEIARAALETAGEICVY----TNDQIILEEL 179 (180)
T ss_dssp HHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHCTT----CCSCCEEEEE
T ss_pred HHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhcCc----cCCeEEEEEE
Confidence 5666777776665 688999888888888776542 3588888776
No 42
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=23.72 E-value=1.6e+02 Score=19.22 Aligned_cols=34 Identities=12% Similarity=0.224 Sum_probs=24.6
Q ss_pred ccccCHHHHHHHHH--HHHhcCCCHHHHHHHHHHHH
Q psy8667 70 WDVMSNEDVVAFVR--LKIGEAMEPEKICEELMTRC 103 (163)
Q Consensus 70 ~d~ls~~ei~~~v~--~~~~~~~~~~~~a~~L~~~A 103 (163)
-..++++|+.+++. ..++.+.+.++-|++|++..
T Consensus 26 ~~~L~~~ElqqFA~Llr~YR~G~~I~~Fc~kLl~Ly 61 (98)
T 4fqn_A 26 RTKLSSQEIQQFAALLHEYRNGASIHEFCINLRQLY 61 (98)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HhhcChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 45577877776654 33556789999999998865
No 43
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=21.92 E-value=41 Score=22.62 Aligned_cols=42 Identities=17% Similarity=0.333 Sum_probs=30.5
Q ss_pred cCccccccCHHHHHHHHHHHHhc---C-------CCHHHHHHHHHHHHHcCCC
Q psy8667 66 CDGIWDVMSNEDVVAFVRLKIGE---A-------MEPEKICEELMTRCLAPDR 108 (163)
Q Consensus 66 SDGl~d~ls~~ei~~~v~~~~~~---~-------~~~~~~a~~L~~~A~~~~~ 108 (163)
+||+|.++ ..+|+++.+.++.+ + ...++-.++|++.|..+..
T Consensus 34 aDgvl~Fi-HHQiiElARDCL~KSr~~LITsrYF~El~E~LEkLl~ea~erSe 85 (114)
T 1v9v_A 34 ADGVLGFI-HHQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSD 85 (114)
T ss_dssp SCHHHHHH-HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 89999876 45677777765542 1 3467888999999988764
No 44
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=21.71 E-value=62 Score=22.71 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=24.1
Q ss_pred ccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCC
Q psy8667 72 VMSNEDVVAFVRLKIGEAMEPEKICEELMTRCLAPDR 108 (163)
Q Consensus 72 ~ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~ 108 (163)
+|+.+|. +++... ..+++-+.+|++.+..+|.
T Consensus 55 vLs~EE~-EiV~~~----~T~~dKaRrLLDlV~sKGe 86 (144)
T 4e9m_A 55 YFSAEDA-EIVCAC----PTQPDKVRKILDLVQSKGE 86 (144)
T ss_dssp SSCHHHH-HHHHTS----SSHHHHHHHHHHHHHHHCH
T ss_pred CCCHHHH-HHHhcc----CChHHHHHHHHHHHHHhhH
Confidence 5788888 666553 7888888888888877663
No 45
>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}
Probab=21.58 E-value=2.7e+02 Score=21.20 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=29.0
Q ss_pred ecCccccccCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHcC
Q psy8667 65 ACDGIWDVMSNEDVVAFVRLKIGEA--MEPEKICEELMTRCLAP 106 (163)
Q Consensus 65 ~SDGl~d~ls~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~ 106 (163)
.||-+-+.++..++.+.+.+.+... .-.+.+|+.+++..+..
T Consensus 43 ~sDdl~~tvdY~~v~~~I~~~~~~~~f~LiE~lA~~Ia~~ll~~ 86 (270)
T 2cg8_A 43 TDLDLTASVHYGELCQQWTTWFQETSEDLIETVAYKLVERTFES 86 (270)
T ss_dssp C-------CCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHHHH
T ss_pred ccCCccccccHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHh
Confidence 4778889999999999999877653 67889999999998873
No 46
>3u5c_N S27A, YS15, 40S ribosomal protein S13; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_O 3o30_G 3o2z_G 3u5g_N 3iz6_O 3jyv_O* 1ysh_E 1s1h_O
Probab=20.41 E-value=1.8e+02 Score=20.53 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=29.0
Q ss_pred cccccCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q psy8667 69 IWDVMSNEDVVAFVRLKIGEAMEPEKICEELMTR 102 (163)
Q Consensus 69 l~d~ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~ 102 (163)
=|=.++.+|+.+.|.+...+|.+|..+--.|.+.
T Consensus 24 ~W~~~~~eeVe~~I~klakkG~tpSqIG~iLRD~ 57 (151)
T 3u5c_N 24 AWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDA 57 (151)
T ss_dssp SSCCSCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHCCCCHHHhhhHHhcc
Confidence 3667899999999999888899999888878775
No 47
>1sw5_A Osmoprotection protein (PROX); binding-protein, compatible solutes, cation-PI interactions, classical hydrogen bonds, protein binding; 1.80A {Archaeoglobus fulgidus} SCOP: c.94.1.1 PDB: 1sw4_A 1sw1_A 1sw2_A 3mam_A*
Probab=20.32 E-value=1.5e+02 Score=22.12 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=25.4
Q ss_pred eEEEEecCccccc-------------cCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q psy8667 60 EFVIIACDGIWDV-------------MSNEDVVAFVRLKIGEAMEPEKICEELMTR 102 (163)
Q Consensus 60 ~~lvL~SDGl~d~-------------ls~~ei~~~v~~~~~~~~~~~~~a~~L~~~ 102 (163)
....+++.++-+. |+.+++.+++.+...++.+++++|+..++.
T Consensus 215 ~~~~v~~~~~~~~P~~~~~l~~l~~~l~~~~~~~l~~~v~~~~~~~~~vA~~wl~~ 270 (275)
T 1sw5_A 215 DAIIIVNGNTAKDEKLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKE 270 (275)
T ss_dssp EEEEEECTTGGGCHHHHHHHHTTTTCCCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred ceeeeeehhhccChHHHHHHHHHHccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 3455777776543 455555555555443456777777776654
Done!