Query psy8674
Match_columns 439
No_of_seqs 502 out of 4138
Neff 9.6
Searched_HMMs 29240
Date Sat Aug 17 00:51:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z86_A Chondroitin synthase; G 100.0 2.1E-42 7.1E-47 359.4 32.9 338 15-398 148-499 (625)
2 2d7i_A Polypeptide N-acetylgal 100.0 5.8E-30 2E-34 261.7 20.1 218 207-429 52-269 (570)
3 1xhb_A Polypeptide N-acetylgal 100.0 1.1E-28 3.9E-33 247.4 22.8 191 241-435 1-192 (472)
4 2ffu_A Ppgalnact-2, polypeptid 100.0 2E-29 6.8E-34 254.6 16.5 205 222-435 19-224 (501)
5 1xhb_A Polypeptide N-acetylgal 99.9 5.1E-27 1.7E-31 235.4 17.7 186 2-190 76-262 (472)
6 2d7i_A Polypeptide N-acetylgal 99.9 2.7E-26 9.2E-31 234.6 17.4 183 3-190 160-342 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 5E-26 1.7E-30 229.7 16.3 180 6-189 113-293 (501)
8 3bcv_A Putative glycosyltransf 99.9 8.1E-23 2.8E-27 185.9 14.2 118 267-390 3-120 (240)
9 1qg8_A Protein (spore coat pol 99.9 9.1E-22 3.1E-26 180.7 13.4 120 269-394 1-129 (255)
10 3bcv_A Putative glycosyltransf 99.9 1.2E-21 4E-26 178.3 11.8 176 2-189 48-228 (240)
11 4fix_A UDP-galactofuranosyl tr 99.8 3.2E-20 1.1E-24 191.2 12.1 174 6-186 231-417 (657)
12 3ckj_A Putative uncharacterize 99.8 3.8E-20 1.3E-24 176.4 8.0 125 266-393 45-172 (329)
13 3l7i_A Teichoic acid biosynthe 99.8 1.5E-20 5.2E-25 197.9 0.0 117 268-389 1-117 (729)
14 1qg8_A Protein (spore coat pol 99.8 4E-19 1.4E-23 163.0 9.3 156 4-191 46-219 (255)
15 2nxv_A ATP synthase subunits r 99.8 1.6E-18 5.3E-23 158.5 13.1 150 16-187 48-204 (249)
16 3f1y_A Mannosyl-3-phosphoglyce 99.8 3.3E-19 1.1E-23 172.3 6.5 121 268-392 93-219 (387)
17 2z86_A Chondroitin synthase; G 99.7 2.7E-17 9.3E-22 170.5 16.9 125 266-395 90-215 (625)
18 4fix_A UDP-galactofuranosyl tr 99.7 3.8E-18 1.3E-22 175.8 8.2 126 267-396 178-311 (657)
19 4hg6_A Cellulose synthase subu 99.7 7.4E-17 2.5E-21 170.7 14.2 129 265-396 136-281 (802)
20 2fy7_A Beta-1,4-galactosyltran 99.7 9.9E-17 3.4E-21 148.6 11.9 125 16-187 99-234 (287)
21 3l7i_A Teichoic acid biosynthe 99.6 1E-17 3.5E-22 176.3 0.0 160 2-186 45-205 (729)
22 4hg6_A Cellulose synthase subu 99.6 1.1E-15 3.9E-20 161.6 11.6 167 5-190 204-372 (802)
23 2nxv_A ATP synthase subunits r 99.6 1.6E-14 5.5E-19 131.8 11.9 97 266-390 13-115 (249)
24 2wvl_A Mannosyl-3-phosphoglyce 99.5 3.4E-14 1.2E-18 130.5 10.6 100 268-374 52-179 (391)
25 3ckj_A Putative uncharacterize 99.5 1.5E-14 5.2E-19 137.6 4.4 147 22-186 113-264 (329)
26 2bo4_A Mannosylglycerate synth 99.5 1.5E-13 5.1E-18 132.5 11.1 113 272-390 2-128 (397)
27 2fy7_A Beta-1,4-galactosyltran 99.3 2E-12 6.9E-17 119.6 9.5 77 268-372 64-147 (287)
28 3f1y_A Mannosyl-3-phosphoglyce 99.3 2.9E-13 1E-17 130.7 3.3 152 19-190 158-313 (387)
29 2zu9_A Mannosyl-3-phosphoglyce 99.3 6.7E-12 2.3E-16 119.0 11.8 104 269-380 51-185 (394)
30 1fo8_A Alpha-1,3-mannosyl-glyc 99.1 6.9E-10 2.4E-14 104.5 11.3 113 269-388 2-136 (343)
31 3lw6_A FI08434P, beta-4-galact 98.9 1.1E-08 3.7E-13 91.3 13.4 128 6-180 73-206 (287)
32 2bo4_A Mannosylglycerate synth 98.6 3.8E-07 1.3E-11 87.8 13.8 132 25-180 73-211 (397)
33 2c0n_A A197; thermophil protei 98.2 5.2E-06 1.8E-10 69.7 9.4 145 6-187 17-174 (203)
34 1fo8_A Alpha-1,3-mannosyl-glyc 97.5 0.00074 2.5E-08 63.4 11.5 147 5-190 45-216 (343)
35 2wvl_A Mannosyl-3-phosphoglyce 97.2 0.00029 9.8E-09 65.2 5.4 58 3-61 97-180 (391)
36 1omz_A Alpha-1,4-N-acetylhexos 95.6 0.019 6.5E-07 52.0 6.4 113 269-388 28-140 (293)
37 2d0j_A Galactosylgalactosylxyl 95.4 0.15 5.1E-06 44.7 11.2 102 268-376 2-122 (246)
38 3cu0_A Galactosylgalactosylxyl 94.9 0.14 4.8E-06 45.6 9.5 102 266-375 18-153 (281)
39 1v84_A Galactosylgalactosylxyl 94.4 0.12 4.1E-06 45.6 7.9 101 268-376 2-128 (253)
40 2zu9_A Mannosyl-3-phosphoglyce 94.2 0.059 2E-06 51.1 5.9 40 26-66 143-185 (394)
41 3oam_A 3-deoxy-manno-octuloson 93.9 0.62 2.1E-05 41.4 11.9 89 283-383 28-120 (252)
42 3lw6_A FI08434P, beta-4-galact 93.8 0.22 7.5E-06 44.6 8.3 74 269-371 51-130 (287)
43 2c0n_A A197; thermophil protei 93.3 0.14 4.8E-06 43.1 5.8 35 342-376 37-78 (203)
44 3tqd_A 3-deoxy-manno-octuloson 93.1 1 3.5E-05 40.1 11.9 88 283-382 35-126 (256)
45 3oam_A 3-deoxy-manno-octuloson 93.1 0.28 9.5E-06 43.7 8.1 66 4-72 52-123 (252)
46 3k8d_A 3-deoxy-manno-octuloson 93.0 0.59 2E-05 41.9 10.2 88 283-384 44-137 (264)
47 1qwj_A Cytidine monophospho-N- 92.4 1.7 5.9E-05 37.7 12.2 90 283-384 29-125 (229)
48 4ecm_A Glucose-1-phosphate thy 92.4 1 3.4E-05 40.4 10.9 93 283-384 56-151 (269)
49 3tzt_A Glycosyl transferase fa 92.2 1.9 6.4E-05 38.9 12.4 119 268-389 3-134 (276)
50 3tqd_A 3-deoxy-manno-octuloson 91.6 0.77 2.6E-05 40.9 9.1 160 4-179 59-234 (256)
51 1fxo_A Glucose-1-phosphate thy 91.3 1.2 4E-05 40.6 10.2 98 274-381 27-127 (293)
52 1ezi_A CMP-N-acetylneuraminic 91.1 0.92 3.1E-05 39.4 8.9 89 283-383 30-126 (228)
53 1h7e_A 3-deoxy-manno-octuloson 90.9 2.9 9.9E-05 36.5 12.2 87 283-382 28-117 (245)
54 4fcu_A 3-deoxy-manno-octuloson 90.9 1.2 4E-05 39.7 9.4 63 4-69 52-120 (253)
55 1lvw_A Glucose-1-phosphate thy 90.4 2.1 7E-05 39.0 10.9 97 274-381 28-128 (295)
56 4ecm_A Glucose-1-phosphate thy 90.3 5 0.00017 35.7 13.3 67 5-72 84-153 (269)
57 3k8d_A 3-deoxy-manno-octuloson 90.0 1.1 3.8E-05 40.1 8.5 158 4-178 68-240 (264)
58 3st8_A Bifunctional protein GL 89.8 2.3 7.7E-05 42.0 11.5 105 274-385 34-142 (501)
59 2wee_A MOBA-related protein; u 89.5 0.39 1.3E-05 40.6 4.9 96 283-391 32-131 (197)
60 1e5k_A Molybdopterin-guanine d 88.9 1.5 5.2E-05 37.3 8.3 89 283-389 34-125 (201)
61 3juk_A UDP-glucose pyrophospho 88.6 0.9 3.1E-05 41.0 7.0 97 283-384 34-154 (281)
62 1mc3_A Glucose-1-phosphate thy 88.5 2.2 7.6E-05 38.8 9.6 96 275-381 29-128 (296)
63 2ux8_A Glucose-1-phosphate uri 87.8 2.1 7E-05 38.9 8.9 97 283-384 46-163 (297)
64 2waw_A MOBA relate protein; un 87.1 0.7 2.4E-05 39.0 5.0 96 283-391 32-131 (199)
65 3f1c_A Putative 2-C-methyl-D-e 87.0 1.6 5.3E-05 38.5 7.4 101 283-392 33-144 (246)
66 4fce_A Bifunctional protein GL 86.7 4.6 0.00016 39.0 11.3 62 4-67 63-126 (459)
67 3ngw_A Molybdopterin-guanine d 86.4 1 3.5E-05 38.7 5.6 94 279-390 24-119 (208)
68 3d5n_A Q97W15_sulso; NESG, SSR 86.4 1.1 3.6E-05 38.1 5.7 93 283-392 29-124 (197)
69 2y6p_A 3-deoxy-manno-octuloson 86.1 2.7 9.3E-05 36.4 8.4 86 283-384 28-116 (234)
70 4fcu_A 3-deoxy-manno-octuloson 86.0 3.2 0.00011 36.8 8.9 88 283-382 27-119 (253)
71 3q80_A 2-C-methyl-D-erythritol 85.8 3.7 0.00013 35.8 9.1 103 279-394 33-142 (231)
72 2e3d_A UTP--glucose-1-phosphat 85.7 3.6 0.00012 37.4 9.4 97 283-384 40-164 (302)
73 1vgw_A 4-diphosphocytidyl-2C-m 85.5 6.4 0.00022 33.8 10.6 93 280-383 33-133 (231)
74 4fce_A Bifunctional protein GL 85.2 2.1 7E-05 41.6 7.9 90 283-383 37-128 (459)
75 1g9r_A Glycosyl transferase; a 84.9 4.7 0.00016 36.9 9.8 113 273-389 3-129 (311)
76 2qh5_A PMI, ALGA, mannose-6-ph 84.9 5.9 0.0002 36.1 10.4 89 280-378 36-128 (308)
77 1w55_A ISPD/ISPF bifunctional 84.9 2.1 7.1E-05 40.4 7.4 87 283-384 32-119 (371)
78 2vsh_A TARI, 2-C-methyl-D-eryt 84.0 4.3 0.00015 35.0 8.8 99 283-390 32-143 (236)
79 3pnn_A Conserved domain protei 83.7 5.8 0.0002 36.1 9.7 93 283-381 34-141 (303)
80 2xwl_A 2-C-methyl-D-erythritol 82.8 5 0.00017 34.3 8.6 90 283-383 31-123 (223)
81 1hm9_A GLMU, UDP-N-acetylgluco 81.9 18 0.00062 34.9 13.2 58 16-73 75-135 (468)
82 2pa4_A UTP-glucose-1-phosphate 81.8 4.9 0.00017 37.0 8.6 97 283-384 44-163 (323)
83 2yc3_A 2-C-methyl-D-erythritol 81.1 2.7 9.3E-05 36.2 6.2 93 283-384 33-128 (228)
84 3juk_A UDP-glucose pyrophospho 80.7 1.7 5.9E-05 39.1 4.9 55 16-70 96-154 (281)
85 1hm9_A GLMU, UDP-N-acetylgluco 80.2 3.5 0.00012 40.0 7.3 90 283-384 40-132 (468)
86 1vic_A 3-deoxy-manno-octuloson 79.1 12 0.0004 33.1 9.9 87 283-383 28-120 (262)
87 2v0h_A Bifunctional protein GL 77.9 6.5 0.00022 37.9 8.4 88 283-381 34-123 (456)
88 2wee_A MOBA-related protein; u 77.6 1.9 6.5E-05 36.2 3.9 57 6-64 60-120 (197)
89 3ngw_A Molybdopterin-guanine d 77.5 2.6 8.8E-05 36.1 4.8 67 6-76 51-119 (208)
90 1i52_A 4-diphosphocytidyl-2-C- 77.3 8.6 0.0003 33.2 8.3 98 283-391 36-138 (236)
91 2y6p_A 3-deoxy-manno-octuloson 76.9 3.6 0.00012 35.5 5.7 62 5-70 52-116 (234)
92 1e5k_A Molybdopterin-guanine d 76.9 3.7 0.00013 34.8 5.6 49 16-64 65-116 (201)
93 1h7e_A 3-deoxy-manno-octuloson 76.7 5.6 0.00019 34.6 7.0 62 4-68 53-117 (245)
94 2ux8_A Glucose-1-phosphate uri 76.1 4.2 0.00014 36.8 6.1 55 16-70 107-163 (297)
95 3rsb_A Adenosylcobinamide-phos 75.8 1.7 5.9E-05 36.5 3.2 89 283-381 28-119 (196)
96 3d5n_A Q97W15_sulso; NESG, SSR 74.6 3.9 0.00014 34.4 5.2 57 16-74 61-120 (197)
97 2xme_A CTP-inositol-1-phosphat 74.0 5 0.00017 34.7 5.8 84 283-377 46-130 (232)
98 1qwj_A Cytidine monophospho-N- 72.2 11 0.00039 32.4 7.7 66 4-71 54-126 (229)
99 2e3d_A UTP--glucose-1-phosphat 71.3 9.9 0.00034 34.4 7.4 55 16-70 103-164 (302)
100 2i5e_A Hypothetical protein MM 71.1 8.5 0.00029 32.7 6.5 56 330-391 66-122 (211)
101 3cgx_A Putative nucleotide-dip 70.2 54 0.0019 28.5 12.6 60 331-392 77-140 (242)
102 1ezi_A CMP-N-acetylneuraminic 70.1 4.7 0.00016 34.7 4.7 67 5-73 56-130 (228)
103 2qh5_A PMI, ALGA, mannose-6-ph 69.7 15 0.00051 33.3 8.2 61 4-64 64-128 (308)
104 2e8b_A Probable molybdopterin- 69.5 15 0.0005 30.9 7.6 77 283-376 41-120 (201)
105 2waw_A MOBA relate protein; un 69.3 4.8 0.00016 33.6 4.5 58 5-64 59-120 (199)
106 1fxo_A Glucose-1-phosphate thy 66.0 26 0.0009 31.4 9.0 66 4-69 61-129 (293)
107 1vpa_A 2-C-methyl-D-erythritol 65.0 12 0.00039 32.3 6.2 98 283-390 42-144 (234)
108 4evw_A Nucleoside-diphosphate- 64.5 24 0.00084 30.9 8.3 93 275-374 25-125 (255)
109 2j0a_A Beta-1,3-N-acetylglucos 62.2 12 0.00043 33.5 6.0 47 133-179 156-210 (280)
110 3rsb_A Adenosylcobinamide-phos 61.6 5.9 0.0002 33.1 3.5 62 4-67 54-119 (196)
111 3st8_A Bifunctional protein GL 61.3 23 0.00078 34.6 8.2 72 3-74 66-145 (501)
112 2pa4_A UTP-glucose-1-phosphate 61.1 16 0.00054 33.5 6.6 55 16-70 106-163 (323)
113 1lvw_A Glucose-1-phosphate thy 59.6 44 0.0015 30.0 9.2 65 4-69 62-130 (295)
114 3brk_X Glucose-1-phosphate ade 59.3 55 0.0019 30.9 10.4 99 275-384 38-154 (420)
115 1mc3_A Glucose-1-phosphate thy 59.1 36 0.0012 30.6 8.5 64 4-68 62-129 (296)
116 1yp2_A Glucose-1-phosphate ade 57.0 83 0.0028 29.9 11.3 100 275-384 46-164 (451)
117 1vic_A 3-deoxy-manno-octuloson 56.9 22 0.00074 31.2 6.6 64 5-71 53-122 (262)
118 2v0h_A Bifunctional protein GL 56.5 17 0.00058 34.9 6.3 62 4-67 60-123 (456)
119 2x65_A Mannose-1-phosphate gua 55.0 28 0.00096 32.0 7.2 94 275-377 28-123 (336)
120 2xme_A CTP-inositol-1-phosphat 54.8 9.6 0.00033 32.8 3.8 53 10-63 77-130 (232)
121 1tzf_A Glucose-1-phosphate cyt 48.6 1.1E+02 0.0039 26.1 10.0 93 283-382 34-148 (259)
122 3f1c_A Putative 2-C-methyl-D-e 47.6 19 0.00065 31.3 4.6 63 6-70 63-135 (246)
123 2vsh_A TARI, 2-C-methyl-D-eryt 45.8 26 0.0009 29.8 5.2 44 26-69 84-135 (236)
124 3pnn_A Conserved domain protei 45.8 47 0.0016 29.9 7.1 63 4-67 61-141 (303)
125 2yc3_A 2-C-methyl-D-erythritol 45.6 19 0.00067 30.6 4.3 52 16-69 73-127 (228)
126 2gak_A Beta-1,6-N-acetylglucos 42.3 2.2E+02 0.0075 26.6 11.8 105 268-380 83-197 (391)
127 2xwl_A 2-C-methyl-D-erythritol 42.0 39 0.0013 28.4 5.7 48 16-65 69-118 (223)
128 2dpw_A Hypothetical protein TT 41.4 40 0.0014 28.9 5.6 49 24-75 68-117 (232)
129 2e8b_A Probable molybdopterin- 40.7 21 0.00071 29.9 3.6 46 17-62 72-120 (201)
130 2dpw_A Hypothetical protein TT 40.1 49 0.0017 28.3 6.0 85 283-390 33-118 (232)
131 1vgw_A 4-diphosphocytidyl-2C-m 38.4 37 0.0013 28.8 5.0 52 16-69 74-133 (231)
132 1s4n_A Glycolipid 2-alpha-mann 38.1 93 0.0032 28.6 7.5 114 268-384 26-175 (348)
133 1jyk_A LICC protein, CTP:phosp 35.2 93 0.0032 26.9 7.1 81 283-376 57-139 (254)
134 1ll2_A Glycogenin-1; protein-s 35.0 2.3E+02 0.008 25.7 10.0 21 350-370 90-110 (333)
135 1i52_A 4-diphosphocytidyl-2-C- 34.7 55 0.0019 27.9 5.5 52 16-69 75-128 (236)
136 1w55_A ISPD/ISPF bifunctional 33.8 51 0.0017 30.8 5.3 51 17-69 67-118 (371)
137 2i5e_A Hypothetical protein MM 31.9 36 0.0012 28.6 3.7 37 26-63 74-111 (211)
138 2px7_A 2-C-methyl-D-erythritol 30.4 33 0.0011 29.5 3.3 51 17-69 84-135 (236)
139 2px7_A 2-C-methyl-D-erythritol 30.3 38 0.0013 29.1 3.6 83 283-384 53-136 (236)
140 3q80_A 2-C-methyl-D-erythritol 29.7 1.5E+02 0.0051 25.3 7.3 50 16-67 73-127 (231)
141 3rht_A (gatase1)-like protein; 29.2 1.3E+02 0.0044 26.4 6.9 33 352-384 48-81 (259)
142 1tzf_A Glucose-1-phosphate cyt 27.6 98 0.0033 26.6 5.9 47 23-70 103-150 (259)
143 2x65_A Mannose-1-phosphate gua 24.4 1.3E+02 0.0046 27.3 6.4 49 6-55 65-114 (336)
144 2ggo_A 401AA long hypothetical 24.1 45 0.0016 31.2 3.2 80 283-377 32-113 (401)
145 3brk_X Glucose-1-phosphate ade 23.2 1.7E+02 0.006 27.3 7.2 46 26-72 108-156 (420)
146 3u2u_A Glycogenin-1, GN-1, GN1 23.2 2.8E+02 0.0094 24.3 7.9 18 353-370 94-111 (263)
147 2xzm_U Ribosomal protein L7AE 23.2 95 0.0033 23.8 4.3 72 303-379 43-124 (126)
No 1
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=100.00 E-value=2.1e-42 Score=359.38 Aligned_cols=338 Identities=17% Similarity=0.189 Sum_probs=230.9
Q ss_pred CcEEEEEecCC-CChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeecccCCCcccccc---
Q psy8674 15 GKVRLIRNTER-EGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTWEFRSV--- 90 (439)
Q Consensus 15 ~~i~~i~~~~n-~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--- 90 (439)
++++++.++.+ .|.++|+|.|++.|+|+||+|+|+|+.++|+||+.+++.+.+++..++.+...............
T Consensus 148 ~~i~~i~~~~~~~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (625)
T 2z86_A 148 LNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQ 227 (625)
T ss_dssp SCEEEEEECCCSCCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHS
T ss_pred CCeEEEEeCCCCcchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccc
Confidence 37999987653 46999999999999999999999999999999999999999877765554443332222100000
Q ss_pred ---------cCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchh
Q psy8674 91 ---------YEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGEN 161 (439)
Q Consensus 91 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED 161 (439)
........+.+.......|. ...................+.|+|+++||++|+++|||||.++.||+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED 305 (625)
T 2z86_A 228 KSLINEIPEIITNNQVAGKVEQNKSVDWR--IEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGED 305 (625)
T ss_dssp TTGGGTSCC---------------CCCTH--HHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHH
T ss_pred hHHhhhcchhccCCchhhhhccCCccccc--hhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcch
Confidence 00000000100000000000 0000000011122234446789999999999999999999999888899
Q ss_pred hHHHHHHHHhCCcEEEecccceecccccccccCCcCCCCCCCCCCCCCCCCCCCccccCcHhHHhhhhhhhhhcccceec
Q psy8674 162 FELSFKIWMCGGSIEWVPCSRIVSLIRPVFKADGKLGNLEPPLEPYKEGPGEGGKAYHLPEAYRAAGDASLGEYGMNMET 241 (439)
Q Consensus 162 ~Dl~~Rl~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 241 (439)
+||++|++++|+++.++|.+.++|..++....... ...++. ....+.....
T Consensus 306 ~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~~~~~~~---------------~~~~~~----------i~~~~~~~~~---- 356 (625)
T 2z86_A 306 NEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETD---------------RAAGKN----------ITVQLLQQKV---- 356 (625)
T ss_dssp HHHHHHHHHTTCEEEECGGGCEEEECCC-----------------------------------------CTTTTTC----
T ss_pred hhhhhhHHhCCceEEEcccchhhccCCccccchhh---------------hhhccc----------chhhhcccCc----
Confidence 99999999999999999999999998766443210 000000 0000000000
Q ss_pred ccccCCCCCCCcccccccccccCCCCCCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHH
Q psy8674 242 SNHISFDRTIPDLRMEECKYWDYPLDLPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLE 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~ 321 (439)
....|.... ......+.+|+||||||+||+. +.|.+||+|+++|+++++ |||||||||+|+|.+ +++
T Consensus 357 ---~~~~rk~~~------~~~~~~~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~~--eiivvdd~S~d~t~~-~~~ 423 (625)
T 2z86_A 357 ---PYFYRKKEK------IESATLKRVPLVSIYIPAYNCS-KYIVRCVESALNQTITDL--EVCICDDGSTDDTLR-ILQ 423 (625)
T ss_dssp ---TTTTCCCCC------TTTCCCCSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCSE--EEEEEEESCSSSHHH-HHH
T ss_pred ---ceEEecccc------cccchhccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCCe--EEEEEECcCChhHHH-HHH
Confidence 000111100 0011124578999999999999 999999999999999877 999999999999987 888
Q ss_pred HHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCC-CEEEEeeeeeecCCC
Q psy8674 322 DYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDR-KIMTVPVIDGIDYQT 398 (439)
Q Consensus 322 ~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~-~~~v~~~~~~~~~~~ 398 (439)
++.+..+ +++++. .+|.|.+.++|.|++.|+||||+|+|+|+.+.|++|+.+++.+..++ .+++++....++.+.
T Consensus 424 ~~~~~~~-~i~~~~-~~n~G~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~ 499 (625)
T 2z86_A 424 EHYANHP-RVRFIS-QKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREG 499 (625)
T ss_dssp HHHTTCT-TEEEEE-ECCCCHHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTS
T ss_pred HHHhhCC-cEEEEe-CCCCCHHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCC
Confidence 8876655 799986 78999999999999999999999999999999999999999997654 466767665555544
No 2
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.97 E-value=5.8e-30 Score=261.66 Aligned_cols=218 Identities=45% Similarity=0.837 Sum_probs=192.1
Q ss_pred CCCCCCCCCccccCcHhHHhhhhhhhhhcccceecccccCCCCCCCcccccccccccCCCCCCceEEEEEecCCChhHHH
Q psy8674 207 YKEGPGEGGKAYHLPEAYRAAGDASLGEYGMNMETSNHISFDRTIPDLRMEECKYWDYPLDLPKASVILVFHNEGFSSLM 286 (439)
Q Consensus 207 ~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vsiiip~~n~~~~~l~ 286 (439)
.+.++|+.|+++.+++... .++.+++++||.++|+.+++.|.+|+.+++.|....++..+|+||||||+||+.++.|.
T Consensus 52 ~~~~~g~~g~~~~~~~~~~--~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~ 129 (570)
T 2d7i_A 52 QRVGNGEQGRPYPMTDAER--VDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLL 129 (570)
T ss_dssp TCCSTTGGGCCCCCCTTTT--SSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEESSCCCEEEEEEESSCCHHHHH
T ss_pred cCCCCCCCCCceECCHHHH--HHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccCCCCCCeEEEEEECCCCHHHHH
Confidence 3467788888887765433 36779999999999999999999999999999988888889999999999999768999
Q ss_pred HHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEcCCCc
Q psy8674 287 RTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCE 366 (439)
Q Consensus 287 ~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld~D~~ 366 (439)
+||+|+++|+++++.+|||||||||+|+|+.++++++.+.++ ++++++.++|.|++.|+|.|++.|+||||+|||+|+.
T Consensus 130 ~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~ 208 (570)
T 2d7i_A 130 RTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP-SVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCE 208 (570)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST-TEEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEE
T ss_pred HHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC-eEEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCcc
Confidence 999999999988655699999999999994338998887765 8999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhhcCCCEEEEeeeeeecCCCceEEeecCCCCCceeeeeccceeEeecCCHH
Q psy8674 367 VGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPER 429 (439)
Q Consensus 367 ~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~~~~~ 429 (439)
+.|+||+.+++.+.+++..+++|.++.++.+++.|.... ....++.|+|.+.+.+..+...
T Consensus 209 ~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 269 (570)
T 2d7i_A 209 ANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQA--GDAMRGAFDWEMYYKRIPIPPE 269 (570)
T ss_dssp ECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCT--TSSCEEEECTTCCEEEECCCTT
T ss_pred ccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhcccc--CCcccccccccccccccccchh
Confidence 999999999999999999999999999999999887431 2356799999999988877653
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.96 E-value=1.1e-28 Score=247.42 Aligned_cols=191 Identities=46% Similarity=0.802 Sum_probs=167.2
Q ss_pred cccccCCCCCCCcccccccccccCCCCCCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChh-hHHHH
Q psy8674 241 TSNHISFDRTIPDLRMEECKYWDYPLDLPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKA-DLDQK 319 (439)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~-t~~~~ 319 (439)
+|+++++.|.+|+.|++.|....++..+|+||||||+||++++.|.+||+|+++|++++..+|||||||||+|+ |.+ +
T Consensus 1 ~s~~~~~~r~~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~-~ 79 (472)
T 1xhb_A 1 ASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR-P 79 (472)
T ss_dssp -------CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTH-H
T ss_pred CCccccCCCCCCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHH-H
Confidence 47899999999999999999999999999999999999997789999999999999887456999999999996 665 8
Q ss_pred HHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEeeeeeecCCCc
Q psy8674 320 LEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTW 399 (439)
Q Consensus 320 ~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~ 399 (439)
++++.+.++.++++++.++|.|++.|+|.|++.|+||||+|||+|+.++|+||+.+++.+.+++..+++|.++.++.+++
T Consensus 80 l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~ 159 (472)
T 1xhb_A 80 LESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTF 159 (472)
T ss_dssp HHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSC
T ss_pred HHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCc
Confidence 99988876647999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCceeeeeccceeEeecCCHHHHhhcc
Q psy8674 400 EFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRK 435 (439)
Q Consensus 400 ~~~~~~~~~~~~~g~~~w~~~~~~~~~~~~~~~~~~ 435 (439)
+|... .....|.|+|.+.+.+..++.+++..+.
T Consensus 160 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 160 EYMAG---SDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CEECC---CTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred eeccC---CCcccceeeccceeecccCCHHHHhccc
Confidence 98633 3456799999999999999988876553
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.96 E-value=2e-29 Score=254.63 Aligned_cols=205 Identities=35% Similarity=0.712 Sum_probs=181.8
Q ss_pred HhHHhhhhhhhhhcccceecccccCCCCCCCcccccccccccCCCCCCceEEEEEecCCChh-HHHHHHHHHHhcCCcCC
Q psy8674 222 EAYRAAGDASLGEYGMNMETSNHISFDRTIPDLRMEECKYWDYPLDLPKASVILVFHNEGFS-SLMRTVHSIIKRTPAQY 300 (439)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vsiiip~~n~~~~-~l~~~l~sl~~q~~~~~ 300 (439)
+...+..++.++.+++|.++|+.+++.|.+|+.+++.|....++..+|+||||||+||++ . .|.+||+|+++|++++.
T Consensus 19 ~~~~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~-~~~L~~~l~Sl~~q~~~~~ 97 (501)
T 2ffu_A 19 GTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEA-RSALLRTVVSVLKKSPPHL 97 (501)
T ss_dssp TTCCCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCCSSCCCEEEEEEESSCC-HHHHHHHHHHHHHHSCGGG
T ss_pred hhhhhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCCcCCCCEEEEEEeCcCc-HHHHHHHHHHHHhhCchhh
Confidence 334455667789999999999999999999999999999888888999999999999999 7 99999999999998865
Q ss_pred cceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhh
Q psy8674 301 LEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIY 380 (439)
Q Consensus 301 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~ 380 (439)
.+|||||||||+|+|.+.. .+..+ ++++++.++|.|++.|+|.|++.|+||||+|||+|+.++|+||+.|++.+.
T Consensus 98 ~~EIIvVDDgS~D~t~~~~----~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~ 172 (501)
T 2ffu_A 98 IKEIILVDDYSNDPEDGAL----LGKIE-KVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVA 172 (501)
T ss_dssp EEEEEEEECSCSCTHHHHG----GGGBT-TEEEEECSSCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHH
T ss_pred ceeEEEEECCCCchHHHHH----HhcCC-CEEEEECCCCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHH
Confidence 5699999999999986522 23444 799999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeeeeeecCCCceEEeecCCCCCceeeeeccceeEeecCCHHHHhhcc
Q psy8674 381 SDRKIMTVPVIDGIDYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRK 435 (439)
Q Consensus 381 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~~~~~~~~~~~ 435 (439)
+++..+|+|.++.++.+++.|... .....|.|.|.+.+.|..++.+++..+.
T Consensus 173 ~~~~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (501)
T 2ffu_A 173 EDRTRVVSPIIDVINMDNFQYVGA---SADLKGGFDWNLVFKWDYMTPEQRRSRQ 224 (501)
T ss_dssp HCTTEEEEEEEEEECTTTCCEECB---CSSEEEEECTTCCEEEEECCHHHHHHTS
T ss_pred hCCCeEEEeeeccCcCCCceeecC---CcccceEeeecCCCccccCCHHHHhhcc
Confidence 999999999999999999988744 2456799999999999999998876654
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.95 E-value=5.1e-27 Score=235.44 Aligned_cols=186 Identities=45% Similarity=0.886 Sum_probs=154.5
Q ss_pred hhHHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeeccc
Q psy8674 2 LDKKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGID 81 (439)
Q Consensus 2 ~~~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~ 81 (439)
+.+.++++.++++.+|++|++++|.|+++|+|.|++.|+|+||+|||+|++++|+||+.+++.+++++..++++.+..++
T Consensus 76 t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~ 155 (472)
T 1xhb_A 76 LKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVIS 155 (472)
T ss_dssp GTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEc
Confidence 66788999888865899999999999999999999999999999999999999999999999999988888888777776
Q ss_pred CCCcccccccCCCCccccccccccccccCCCchHHHhhcc-CCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccch
Q psy8674 82 YQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRK-YNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGE 160 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~E 160 (439)
...+.+... .....+.+.|.+.+.+..++......+. ....+..++.+.|+++++||++|+++|||||.|++||+|
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~E 232 (472)
T 1xhb_A 156 DDTFEYMAG---SDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGE 232 (472)
T ss_dssp SSSCCEECC---CTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCC
T ss_pred CCCceeccC---CCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCch
Confidence 666554321 2334567778777766665544333222 334577888899999999999999999999999998889
Q ss_pred hhHHHHHHHHhCCcEEEecccceecccccc
Q psy8674 161 NFELSFKIWMCGGSIEWVPCSRIVSLIRPV 190 (439)
Q Consensus 161 D~Dl~~Rl~~~G~~i~~~p~~~v~H~~~~~ 190 (439)
|+||++|++++|+++.++|.+.++|..+..
T Consensus 233 D~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 233 NLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp CSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred hHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 999999999999999999999999997664
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.94 E-value=2.7e-26 Score=234.55 Aligned_cols=183 Identities=50% Similarity=1.004 Sum_probs=149.3
Q ss_pred hHHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeecccC
Q psy8674 3 DKKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGIDY 82 (439)
Q Consensus 3 ~~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~ 82 (439)
.+.++++.++++ +|++|++++|.|+++|+|.|++.|+|+||+|||+|++++|+||+.+++.+.+++..++++.+..++.
T Consensus 160 ~~~l~~~~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~ 238 (570)
T 2d7i_A 160 KKPLEDYMALFP-SVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDH 238 (570)
T ss_dssp THHHHHHHTTST-TEEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECT
T ss_pred HHHHHHHHHhCC-eEEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCC
Confidence 678889988886 9999999999999999999999999999999999999999999999999999888888888777766
Q ss_pred CCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhh
Q psy8674 83 QTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENF 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~ 162 (439)
.++.+.... .....+.+.|.+.+.+...... ........+..++.+.|+|+++||++|+++|||||+|++||+||+
T Consensus 239 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~ 314 (570)
T 2d7i_A 239 DDFRYETQA--GDAMRGAFDWEMYYKRIPIPPE--LQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQY 314 (570)
T ss_dssp TTCCEECCT--TSSCEEEECTTCCEEEECCCTT--TCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHH
T ss_pred Cchhhcccc--CCcccccccccccccccccchh--hhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchH
Confidence 665443310 1223456667655443322211 011223456677888999999999999999999999999988999
Q ss_pred HHHHHHHHhCCcEEEecccceecccccc
Q psy8674 163 ELSFKIWMCGGSIEWVPCSRIVSLIRPV 190 (439)
Q Consensus 163 Dl~~Rl~~~G~~i~~~p~~~v~H~~~~~ 190 (439)
||++|++++|+++.++|.+.|+|.++..
T Consensus 315 dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 315 EISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp HHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred HHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 9999999999999999999999987644
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.93 E-value=5e-26 Score=229.71 Aligned_cols=180 Identities=41% Similarity=0.855 Sum_probs=150.1
Q ss_pred HHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeecccCCCc
Q psy8674 6 LEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTW 85 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~ 85 (439)
+++.+++++ +|++|++++|.|+++|+|.|++.|+|+||+|||+|++++|+||+.+++.+++++..+++|.+..++.+.+
T Consensus 113 ~~~~~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~ 191 (501)
T 2ffu_A 113 DGALLGKIE-KVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNF 191 (501)
T ss_dssp HHHGGGGBT-TEEEEECSSCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTC
T ss_pred HHHHHhcCC-CEEEEECCCCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCc
Confidence 345556676 8999999999999999999999999999999999999999999999999999888888888777766665
Q ss_pred ccccccCCCCccccccccccccccCCCchHHHhhcc-CCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhhHH
Q psy8674 86 EFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRK-YNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENFEL 164 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~Dl 164 (439)
.+... .....+.+.|.+.+.|..++......+. ....++..+.+.|+++++||++|+++|||||.+++||+||+||
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl 268 (501)
T 2ffu_A 192 QYVGA---SADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEI 268 (501)
T ss_dssp CEECB---CSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHH
T ss_pred eeecC---CcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHH
Confidence 54321 2234567777777766666554433333 4456777888899999999999999999999999988899999
Q ss_pred HHHHHHhCCcEEEecccceeccccc
Q psy8674 165 SFKIWMCGGSIEWVPCSRIVSLIRP 189 (439)
Q Consensus 165 ~~Rl~~~G~~i~~~p~~~v~H~~~~ 189 (439)
++|++++|+++.++|.+.|+|.+|.
T Consensus 269 ~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 269 SFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp HHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred HHHHHhcCCeEEEccCcEEEEEccC
Confidence 9999999999999999999998765
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.89 E-value=8.1e-23 Score=185.94 Aligned_cols=118 Identities=23% Similarity=0.278 Sum_probs=105.9
Q ss_pred CCCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHH
Q psy8674 267 DLPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTR 346 (439)
Q Consensus 267 ~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~ 346 (439)
.+|+||||||+||++ +.|.+||+|+++|+++++ |||||||||+|+|.+ +++++.+..+ ++++++ .+|.|.+.|+
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~~--eiIvvDd~S~d~t~~-~~~~~~~~~~-~i~~i~-~~n~G~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSDI--EIILIDDESPDNCPK-ICDDYAAQYP-NIKVIH-KKNAGLGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSSE--EEEEEECCCSSSHHH-HHHHHHHHCS-SEEEEE-CCCCCHHHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCCe--EEEEEECCCCcCHHH-HHHHHHhhCC-CEEEEE-CCCCChHHHH
Confidence 468999999999999 999999999999999876 999999999999977 9999888766 799996 5799999999
Q ss_pred HHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEee
Q psy8674 347 SRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPV 390 (439)
Q Consensus 347 n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~~ 390 (439)
|.|++.|+|+||+|+|+|+.+.|+||+.+++.+++++..++++.
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999999999999999999987554444433
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.87 E-value=9.1e-22 Score=180.73 Aligned_cols=120 Identities=18% Similarity=0.329 Sum_probs=108.4
Q ss_pred CceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC--------CCC
Q psy8674 269 PKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT--------ERE 340 (439)
Q Consensus 269 p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~--------~~~ 340 (439)
|+||||||+||++ +.|.+||+|+++|+++++ |||||||||+|+|.+ +++++.. ..++++++.+ +|.
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~~--eiivvDd~S~d~t~~-~~~~~~~--~~~i~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDF--ELFIMDDNSNEETLN-VIRPFLN--DNRVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCCE--EEEEEECSCCHHHHH-HHGGGGG--STTEEEEECCCCSHHHHHSSC
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCce--EEEEEECCCCchHHH-HHHHHhh--cCCEEEEeccccccccccccc
Confidence 6899999999999 999999999999999876 999999999999877 8887755 3479999988 899
Q ss_pred CHHHHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcC-CCEEEEeeeeee
Q psy8674 341 GLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSD-RKIMTVPVIDGI 394 (439)
Q Consensus 341 g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~ 394 (439)
|.+.++|.|++.|+|+||+|+|+|+.+.|++|+.+++.+.++ ...++++.+..+
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 129 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY 129 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE
Confidence 999999999999999999999999999999999999999876 557777776655
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.86 E-value=1.2e-21 Score=178.26 Aligned_cols=176 Identities=13% Similarity=0.132 Sum_probs=108.5
Q ss_pred hhHHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeeccc
Q psy8674 2 LDKKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGID 81 (439)
Q Consensus 2 ~~~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~ 81 (439)
+.+.++++.++++ +|++++ .+|.|+++|+|.|++.|+|+||+|||+|++++|+||+.+++.+++.+.+++.+....+.
T Consensus 48 t~~~~~~~~~~~~-~i~~i~-~~n~G~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~ 125 (240)
T 3bcv_A 48 CPKICDDYAAQYP-NIKVIH-KKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRIT 125 (240)
T ss_dssp HHHHHHHHHHHCS-SEEEEE-CCCCCHHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC------
T ss_pred HHHHHHHHHhhCC-CEEEEE-CCCCChHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEc
Confidence 5677888888887 899997 78999999999999999999999999999999999999999998754454443332222
Q ss_pred CCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCC----ccCccccceEEEEeHHHHHHhC-CCCCCCCC
Q psy8674 82 YQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEP----YKSPTHAGGLFAMDRAFFLELG-GYDPGLLV 156 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~irr~~f~~iG-gfde~~~~ 156 (439)
.+....... .........+... ... ..........+ ......+|+++++||++|+++| ||||.++.
T Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~ 196 (240)
T 3bcv_A 126 MAGIPTGTV-THQKEFKLYKNKN------EIH--TLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERIL 196 (240)
T ss_dssp ---------------CEEECSHH------HHH--HHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTC
T ss_pred cCCcccccc-ccccccccccCHH------HHH--HHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCc
Confidence 111000000 0000000000000 000 00000000000 0011245788999999999999 99999875
Q ss_pred ccchhhHHHHHHHHhCCcEEEecccceeccccc
Q psy8674 157 WGGENFELSFKIWMCGGSIEWVPCSRIVSLIRP 189 (439)
Q Consensus 157 ~~~ED~Dl~~Rl~~~G~~i~~~p~~~v~H~~~~ 189 (439)
++ ||+||++|+..+|+++.++|.+.++|..|.
T Consensus 197 ~~-eD~~~~~r~~~~g~~i~~~~~~~~~yr~~~ 228 (240)
T 3bcv_A 197 PS-EDLIFNVDVLANSNIVCVLPQTFYNYRTNP 228 (240)
T ss_dssp TT-HHHHHHHHHHTTCSCEEECC----------
T ss_pred cC-CCHHHHHHHHHhCCEEEEECCCeEEEEeCC
Confidence 44 999999999999999999999855544433
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.82 E-value=3.2e-20 Score=191.15 Aligned_cols=174 Identities=14% Similarity=0.102 Sum_probs=117.4
Q ss_pred HHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhcc----CcEEEEecCCcccCCCchHHHHHHHhcCCCe-Eeeeeeecc
Q psy8674 6 LEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESR----GEVIVFLDAHCEVGLNWLPPLLAPIYSDRKI-MTVPVIDGI 80 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~----g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~-~v~~~~~~~ 80 (439)
+.+++++..++|++|.++ |.|+++|+|.|++.|+ +|||+|||+|++++|+||+.+++.++.++.. ++++.+...
T Consensus 231 ~~e~~~~~~~~I~vI~~~-N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~ 309 (657)
T 4fix_A 231 FPAAAARLGSRLSIHDQP-NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNL 309 (657)
T ss_dssp HHHHHHHHGGGEEEEECC-CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEET
T ss_pred HHHHHHhcCCCEEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecC
Confidence 444555444599999977 9999999999999995 4799999999999999999999999987654 555555443
Q ss_pred cCCCcccccccCCCCcccccccccc--------ccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCC
Q psy8674 81 DYQTWEFRSVYEPDHHYRGIFEWGM--------LYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDP 152 (439)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde 152 (439)
......... + .....+.+.|.. .+....+..... ..........+.+..|+|+++||++|+++||||
T Consensus 310 ~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~-~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd- 384 (657)
T 4fix_A 310 QEPSHLHIM--G-EVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNS-RSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL- 384 (657)
T ss_dssp TSTTEECCS--C-EEEETTTTEEEECTTCCSCEETTTSCSSCSSH-HHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC-
T ss_pred CCCceeeec--c-cEeccccccccccccccccccccccccccccc-cccccccceeccccchhHhHhhHHHHHHhCCCh-
Confidence 332111100 0 000001111100 000000000000 000111234556788999999999999999999
Q ss_pred CCCCccchhhHHHHHHHHhCCcEEEecccceecc
Q psy8674 153 GLLVWGGENFELSFKIWMCGGSIEWVPCSRIVSL 186 (439)
Q Consensus 153 ~~~~~~~ED~Dl~~Rl~~~G~~i~~~p~~~v~H~ 186 (439)
.+|+++ ||+|||+|++++|++++++|++.|+|.
T Consensus 385 ~~F~~~-ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 385 PLFIKW-DDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp SCSSSS-HHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred hHhccC-cHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 566665 999999999999999999999999995
No 12
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.80 E-value=3.8e-20 Score=176.39 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=101.2
Q ss_pred CCCCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEE-cCCCCCHHH
Q psy8674 266 LDLPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIR-NTEREGLIR 344 (439)
Q Consensus 266 ~~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~-~~~~~g~~~ 344 (439)
...|+||||||+||++ +.|.+||+|+++|+++. .+|||||||||+|+|.+ +++++..+....++++. .++|.|++.
T Consensus 45 ~~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~-~~~~~~~~~~~~~~~~~~~~~n~G~~~ 121 (329)
T 3ckj_A 45 KAGRTISVVLPALDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEI-RAVAAGARVVSREQALPEVPIRPGKGE 121 (329)
T ss_dssp TTTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHH-HHHHTTCEEEEHHHHCTTSCCCCSHHH
T ss_pred ccCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHH-HHHHhhhhhccceeeeccCCCCCCHHH
Confidence 3468999999999999 99999999999999874 23999999999999977 77765322111122221 678999999
Q ss_pred HHHHHHhhcCCCEEEEEcCCCc-cCCCChHHHHHhhhcC-CCEEEEeeeee
Q psy8674 345 TRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSD-RKIMTVPVIDG 393 (439)
Q Consensus 345 a~n~g~~~a~~d~i~~ld~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~~ 393 (439)
|+|.|++.|+|+||+|+|+|+. +.|++|+.+++.+..+ ..++|++....
T Consensus 122 a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~ 172 (329)
T 3ckj_A 122 ALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRR 172 (329)
T ss_dssp HHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEEC
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecc
Confidence 9999999999999999999999 8999999999997554 55667766543
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.78 E-value=1.5e-20 Score=197.90 Aligned_cols=117 Identities=20% Similarity=0.341 Sum_probs=0.0
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHH
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRS 347 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n 347 (439)
||+||||||+||++ +.|.+||+|+++|+++++ |||||||||+|+|.+ +++++.+.++.++++++.++|.|.+.|+|
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~~--EIIVVDDgStD~t~~-il~~~~~~~~~~i~~i~~~~n~G~~~arN 76 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQDF--NLIIVNDGSTDQSKK-LMDEAIKDYDKNIRFIDLDENSGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCCe--EEEEEECCCCCcHHH-HHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 58899999999999 999999999999999977 999999999999987 99998887666899999999999999999
Q ss_pred HHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEe
Q psy8674 348 RGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVP 389 (439)
Q Consensus 348 ~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~ 389 (439)
.|++.|+|+||+|+|+|+.+.|++|+.+++.+. +...++++
T Consensus 77 ~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~ 117 (729)
T 3l7i_A 77 IALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAP 117 (729)
T ss_dssp ------------------------------------------
T ss_pred HHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEe
Confidence 999999999999999999999999999999998 44444443
No 14
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.77 E-value=4e-19 Score=163.01 Aligned_cols=156 Identities=6% Similarity=0.028 Sum_probs=111.4
Q ss_pred HHHHHHHHhcCCcEEEEEec--------CCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCC-CeEee
Q psy8674 4 KKLEDYIERFNGKVRLIRNT--------EREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDR-KIMTV 74 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~~--------~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~-~~~v~ 74 (439)
+.++++.+ . ++|++++++ +|.|+++|+|.|++.|+|+||+|||+|+.++|+||+.+++.+++++ ..+++
T Consensus 46 ~~~~~~~~-~-~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~ 123 (255)
T 1qg8_A 46 NVIRPFLN-D-NRVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIY 123 (255)
T ss_dssp HHHGGGGG-S-TTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHhh-c-CCEEEEecccccccccccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEE
Confidence 34444433 3 489999988 8999999999999999999999999999999999999999999874 45565
Q ss_pred eeeecc--cCCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhC-CC-
Q psy8674 75 PVIDGI--DYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELG-GY- 150 (439)
Q Consensus 75 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iG-gf- 150 (439)
+..... +....... ........+ .......+.|+++++||++|+++| ||
T Consensus 124 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~------------~~~~~~~~~~~~~~~rr~~~~~~g~~f~ 176 (255)
T 1qg8_A 124 SASKTYHLNENRDIVK---------------ETVRPAAQV------------TWNAPCAIDHCSVMHRYSVLEKVKEKFG 176 (255)
T ss_dssp EEEEEEEEC---CEEE---------------EEEECCCSC------------BSCCTTTSCGGGEEEETHHHHHHHHHHS
T ss_pred eceEEEEeCCCCcchh---------------hccCchHHH------------HHhhcCCCccceEEEEHHHHHhhccccc
Confidence 554433 22111000 000000000 002233557889999999999999 89
Q ss_pred -----CCCCCCccchhhHHHHHHHHhCCcEEEecccceeccccccc
Q psy8674 151 -----DPGLLVWGGENFELSFKIWMCGGSIEWVPCSRIVSLIRPVF 191 (439)
Q Consensus 151 -----de~~~~~~~ED~Dl~~Rl~~~G~~i~~~p~~~v~H~~~~~~ 191 (439)
|+.+ ..+||+||++|+...| ++.++|...++|..++..
T Consensus 177 ~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s 219 (255)
T 1qg8_A 177 SYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQS 219 (255)
T ss_dssp SSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC---
T ss_pred ccccCCccc--chHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCc
Confidence 6766 3469999999999987 799999999988766543
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.77 E-value=1.6e-18 Score=158.50 Aligned_cols=150 Identities=11% Similarity=0.004 Sum_probs=101.8
Q ss_pred cEEEEEecCC--CChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhc----CCCe-EeeeeeecccCCCcccc
Q psy8674 16 KVRLIRNTER--EGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYS----DRKI-MTVPVIDGIDYQTWEFR 88 (439)
Q Consensus 16 ~i~~i~~~~n--~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~----~~~~-~v~~~~~~~~~~~~~~~ 88 (439)
+|-||.+... .|+++|+|.|++.|+|+||+|||+|++++++||+.+++.+++ ++.. ++++.........
T Consensus 48 EiIVVDn~s~d~~g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g---- 123 (249)
T 2nxv_A 48 EFLAADNREGNQFHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLN---- 123 (249)
T ss_dssp EEEEEECTTSCSCCTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSC----
T ss_pred EEEEEECCCCCcccHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCC----
Confidence 4667775432 699999999999999999999999999999999999999987 3544 3433222111000
Q ss_pred cccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhhHHHHHH
Q psy8674 89 SVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENFELSFKI 168 (439)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~Dl~~Rl 168 (439)
... ......+..... .. ......+..+.++.|+||++||++ +|||||.+..+..||+|||+|+
T Consensus 124 ----~~~-~~~~~~~~~~~~---~~------~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~ 186 (249)
T 2nxv_A 124 ----HSV-TAQALHISDVFG---ND------RRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQA 186 (249)
T ss_dssp ----TTS-CCCEEEEEETTE---EE------EEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHH
T ss_pred ----cee-eecccccCCccc---cc------cccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHH
Confidence 000 000000000000 00 000023445667889999999999 8899997754556899999999
Q ss_pred HHhCCcEEEecccceeccc
Q psy8674 169 WMCGGSIEWVPCSRIVSLI 187 (439)
Q Consensus 169 ~~~G~~i~~~p~~~v~H~~ 187 (439)
+++|+++++.|. .++|..
T Consensus 187 ~~~G~~~~~~p~-~v~H~~ 204 (249)
T 2nxv_A 187 EFLGGRAYAIDF-HLHHYG 204 (249)
T ss_dssp HHTTCEEEECCC-CCEECC
T ss_pred HHcCCeEEEecc-EEEECC
Confidence 999999999985 488864
No 16
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.76 E-value=3.3e-19 Score=172.33 Aligned_cols=121 Identities=15% Similarity=0.141 Sum_probs=97.7
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHh---cCCcCCcceEEEEeCCCChhhHHHHHHHHHHHc-CCcEEEEEcCCCCCHH
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIK---RTPAQYLEEIILVDDFSSKADLDQKLEDYIQRF-NGKVRLIRNTEREGLI 343 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~---q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~v~~i~~~~~~g~~ 343 (439)
.|+||||||+||++ +.|.+||+|+.+ |...++ |||||||||+|+|.+ +++++..+. ...++++..+.|.|++
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~~~--EIIVVDDgStD~T~~-i~~~~~~~v~~~~~~~i~~~~n~G~g 168 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPLID--QILVVDADSEDGTAG-VAASHGAEVYSENELMSGYGDAHGKG 168 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCCCS--EEEEEECSCSSSHHH-HHHHTTCEEEEGGGTTGGGCSCCSHH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCCCe--EEEEEcCcCCccHHH-HHHHhCchhcccceeEecCCccCCHH
Confidence 57899999999999 999999999976 333455 999999999999987 777653211 0011123456799999
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCc-cCCCChHHHHHhhhcC-CCEEEEeeee
Q psy8674 344 RTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSD-RKIMTVPVID 392 (439)
Q Consensus 344 ~a~n~g~~~a~~d~i~~ld~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~ 392 (439)
.|+|.|++.|+|+||+|+|+|+. ++|+||..+++.+..+ ...+|++...
T Consensus 169 ~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~ 219 (387)
T 3f1y_A 169 DAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYR 219 (387)
T ss_dssp HHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeec
Confidence 99999999999999999999999 8999999999999776 4566666543
No 17
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.74 E-value=2.7e-17 Score=170.47 Aligned_cols=125 Identities=16% Similarity=0.216 Sum_probs=104.7
Q ss_pred CCCCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC-CCCHHH
Q psy8674 266 LDLPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE-REGLIR 344 (439)
Q Consensus 266 ~~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~-~~g~~~ 344 (439)
..+|.||||||+||+. +.|.+||+|+..|+++. .+|||||||||+|+|.+ +++++... .+++++..+. +.|++.
T Consensus 90 ~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~-~~~~~~~~--~~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEE-IVREFESL--LNIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHH-HHHTTTTT--SCEEEEEECCCSCCHHH
T ss_pred ccCCcEEEEEecCCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHH-HHHHhhhc--CCeEEEEeCCCCcchhH
Confidence 4568999999999998 99999999999997653 44999999999999876 77776433 3688887654 347999
Q ss_pred HHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEeeeeeec
Q psy8674 345 TRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGID 395 (439)
Q Consensus 345 a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~ 395 (439)
++|.|++.|+|+||+|+|+|+.++|+||+.++..+..++..++++.....+
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~ 215 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYID 215 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEEC
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeecc
Confidence 999999999999999999999999999999999999877766665444433
No 18
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.72 E-value=3.8e-18 Score=175.76 Aligned_cols=126 Identities=12% Similarity=0.085 Sum_probs=101.7
Q ss_pred CCCceEEEEEecCCChhHHHHHHHHHHhcCC---cCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHH
Q psy8674 267 DLPKASVILVFHNEGFSSLMRTVHSIIKRTP---AQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLI 343 (439)
Q Consensus 267 ~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~---~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~ 343 (439)
..|+||||||+||+. +.|.+||+||.+|++ ..+ |||||||||+|++....+.++.+...++++++.++ |.|.+
T Consensus 178 ~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~--EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N~G~a 253 (657)
T 4fix_A 178 GTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIG--AVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-NLGGS 253 (657)
T ss_dssp SCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEE--EEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-CCHHH
T ss_pred CCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCC--EEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-CCCHH
Confidence 458999999999999 999999999999986 444 99999999998531112222333333489999887 99999
Q ss_pred HHHHHHHhhc----CCCEEEEEcCCCccCCCChHHHHHhhhcCCC-EEEEeeeeeecC
Q psy8674 344 RTRSRGAKES----RGEVIVFLDAHCEVGLNWLPPLLAPIYSDRK-IMTVPVIDGIDY 396 (439)
Q Consensus 344 ~a~n~g~~~a----~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~ 396 (439)
+|+|.|++.| .+|||+|||+|+.++|+||+.+++.++.++. ++++|.+-..+.
T Consensus 254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~ 311 (657)
T 4fix_A 254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQE 311 (657)
T ss_dssp HHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTS
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCC
Confidence 9999999998 4589999999999999999999999987655 566776655444
No 19
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.70 E-value=7.4e-17 Score=170.65 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=105.1
Q ss_pred CCCCCceEEEEEecCCChhHH-HHHHHHHHhcCCcCCcceEEEEeCCCChhhH--------------HHHHHHHHHHcCC
Q psy8674 265 PLDLPKASVILVFHNEGFSSL-MRTVHSIIKRTPAQYLEEIILVDDFSSKADL--------------DQKLEDYIQRFNG 329 (439)
Q Consensus 265 ~~~~p~vsiiip~~n~~~~~l-~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~--------------~~~~~~~~~~~~~ 329 (439)
+...|+||||||+||++ ..+ .+||+|+.+|+|++..+|||||||||+|+|. .+.++++.++.
T Consensus 136 ~~~~P~VSViIPtyNe~-~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~-- 212 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEP-ADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL-- 212 (802)
T ss_dssp TTTCCCEEEEEECTTCC-HHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccCCCcEEEEEEECCCC-HHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc--
Confidence 35678999999999999 655 9999999999999744599999999999983 22455555554
Q ss_pred cEEEEEcCCC-CCHHHHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcC-CCEEEEeeeeeecC
Q psy8674 330 KVRLIRNTER-EGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSD-RKIMTVPVIDGIDY 396 (439)
Q Consensus 330 ~v~~i~~~~~-~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~ 396 (439)
+++++..+++ .|++.++|.|++.+++|||+++|+|+.++|++++.+++.++++ ..+++++.....+.
T Consensus 213 ~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~ 281 (802)
T 4hg6_A 213 GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP 281 (802)
T ss_dssp TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSC
T ss_pred CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCC
Confidence 4667766665 7899999999999999999999999999999999999999654 45667765544443
No 20
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.69 E-value=9.9e-17 Score=148.61 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=85.6
Q ss_pred cEEEEEecCCC--ChhHHHHhhh----hhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeecccCCCccccc
Q psy8674 16 KVRLIRNTERE--GLIRTRSRGA----KESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTWEFRS 89 (439)
Q Consensus 16 ~i~~i~~~~n~--G~a~arN~G~----~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (439)
.|-||....+. +.+.++|.|+ +.|+|+||+|+|+|+++.++++.. .++ ... ...
T Consensus 99 EIiVVdds~d~~f~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~------------~~~------~~p-~~~- 158 (287)
T 2fy7_A 99 GIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAY------------RCF------SQP-RHI- 158 (287)
T ss_dssp EEEEEEECSSSCCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC------------SCC------SSC-EEC-
T ss_pred eEEEEEeCCCCccchhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcceE------------ecC------CCC-ceE-
Confidence 56777765554 5688899999 999999999999999999996210 000 000 000
Q ss_pred ccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q psy8674 90 VYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENFELSFKIW 169 (439)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~Dl~~Rl~ 169 (439)
......+.+ . .....+.|+++++||++|+++|||||.|+.||+||.||++|+.
T Consensus 159 -----~~~~~~~~~--------------------~--~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~ 211 (287)
T 2fy7_A 159 -----SVAMDKFGF--------------------S--LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLV 211 (287)
T ss_dssp -----CCEEGGGTT--------------------S--CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHH
T ss_pred -----EEeeccccc--------------------C--CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHH
Confidence 000000000 0 0113557999999999999999999999988899999999999
Q ss_pred HhCCcEEEe-----cccceeccc
Q psy8674 170 MCGGSIEWV-----PCSRIVSLI 187 (439)
Q Consensus 170 ~~G~~i~~~-----p~~~v~H~~ 187 (439)
++|+++... +...++|..
T Consensus 212 ~~G~~i~~~~~~~~~~~~i~H~~ 234 (287)
T 2fy7_A 212 FRGMSISRPNAVVGTTRHIRHSR 234 (287)
T ss_dssp HTTCCCBCCCTTTCEEEECC---
T ss_pred HcCCeEEecCcccceeEEEecCC
Confidence 999999843 444455544
No 21
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.65 E-value=1e-17 Score=176.33 Aligned_cols=160 Identities=12% Similarity=0.106 Sum_probs=0.0
Q ss_pred hhHHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeeccc
Q psy8674 2 LDKKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDGID 81 (439)
Q Consensus 2 ~~~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~ 81 (439)
+.+.++++.++++++|+++++++|.|+++|+|.|++.|+|+||+|||+|+.+.|+||+.+++.++ +...++++. ....
T Consensus 45 t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~-~~~~ 122 (729)
T 3l7i_A 45 SKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPI-HSFT 122 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEee-EEee
Confidence 45667788777666999999999999999999999999999999999999999999999999998 333333322 2211
Q ss_pred CCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhC-CCCCCCCCccch
Q psy8674 82 YQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELG-GYDPGLLVWGGE 160 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iG-gfde~~~~~~~E 160 (439)
........ ........ .... .... .......++++++||++|+++| +|||.+.. +|
T Consensus 123 ~~~~~~~~--------~~~~~~~~------~~~~-----~~~~--~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~--~E 179 (729)
T 3l7i_A 123 TQRPQFVD--------LDRVRVEY------FNAK-----ENIN--SFLRKQSACNIIFRTAIVRAHHIRFNENLNT--YV 179 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCcccc--------ccceeeee------ecch-----hhHH--HHhhccchhheeeeHHHHHHcCCCcCCCCCc--cc
Confidence 11100000 00000000 0000 0000 0111346778999999999999 99999842 59
Q ss_pred hhHHHHHHHHhCCcEEEecccceecc
Q psy8674 161 NFELSFKIWMCGGSIEWVPCSRIVSL 186 (439)
Q Consensus 161 D~Dl~~Rl~~~G~~i~~~p~~~v~H~ 186 (439)
|+||++|+...|+++.++|...++|.
T Consensus 180 D~d~~~rl~~~g~~i~~~~~~~~~~y 205 (729)
T 3l7i_A 180 DWSFVLEYMKYVNKFVRIFNFPFYFR 205 (729)
T ss_dssp --------------------------
T ss_pred CHHHHHHHHHhcCCEEEecCcEEEEE
Confidence 99999999999999999954556554
No 22
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.62 E-value=1.1e-15 Score=161.62 Aligned_cols=167 Identities=13% Similarity=0.132 Sum_probs=113.6
Q ss_pred HHHHHHHhcCCcEEEEEecCC-CChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCC-eEeeeeeecccC
Q psy8674 5 KLEDYIERFNGKVRLIRNTER-EGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRK-IMTVPVIDGIDY 82 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~~~~n-~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~ 82 (439)
.++++.++++ ++++..++| .|.++|+|.|++.|+||||+|+|+|+.++|++|+.+++.+++++. +++++.....+.
T Consensus 204 ~l~~~~~~~~--v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~ 281 (802)
T 4hg6_A 204 ELQQLCRELG--VVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP 281 (802)
T ss_dssp HHHHHHHHHT--CEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSC
T ss_pred HHHHHHHhcC--cEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCC
Confidence 4566666664 788887776 789999999999999999999999999999999999999976665 455443333222
Q ss_pred CCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhh
Q psy8674 83 QTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENF 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~ 162 (439)
+...... ..+.. .......+........ .......+.|+++++||++|+++|||++... +||.
T Consensus 282 ~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~ 344 (802)
T 4hg6_A 282 DPIQRNL---------ALGDR-CPPENEMFYGKIHRGL----DRWGGAFFCGSAAVLRRRALDEAGGFAGETI---TEDA 344 (802)
T ss_dssp CHHHHHH---------TCCTT-SCCTTHHHHHTHHHHH----HHTTCCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHH
T ss_pred chHhhhh---------hHHhh-hhHHHHHHHHHHHhhH----hhcCCceecccchhhhHHHHHHcCCcCCCCc---chHH
Confidence 2110000 00000 0000000000000000 0112234578999999999999999999774 3999
Q ss_pred HHHHHHHHhCCcEEEecccceecccccc
Q psy8674 163 ELSFKIWMCGGSIEWVPCSRIVSLIRPV 190 (439)
Q Consensus 163 Dl~~Rl~~~G~~i~~~p~~~v~H~~~~~ 190 (439)
|+++|+.+.|+++.++|++.++|.....
T Consensus 345 ~l~~rl~~~G~ri~~~~~~~~~~~~p~t 372 (802)
T 4hg6_A 345 ETALEIHSRGWKSLYIDRAMIAGLQPET 372 (802)
T ss_dssp HHHHHHHTTTCCEEECCCCCEEECCCCS
T ss_pred HHHHHHHHcCCeEEEecCCEEEecCCCC
Confidence 9999999999999999999999975443
No 23
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.56 E-value=1.6e-14 Score=131.78 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=77.8
Q ss_pred CCCCceEEEEEecCCChhHHHHHHHHHHhcCC-cCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHH
Q psy8674 266 LDLPKASVILVFHNEGFSSLMRTVHSIIKRTP-AQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIR 344 (439)
Q Consensus 266 ~~~p~vsiiip~~n~~~~~l~~~l~sl~~q~~-~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~ 344 (439)
+..|.+||| |+||+. +.|.+||+|+.+... +.. +|||||||+|+|. .|.+.
T Consensus 13 ~~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-------------------------~g~a~ 64 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-------------------------FHGFS 64 (249)
T ss_dssp CCCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-------------------------CCTTT
T ss_pred CCcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-------------------------ccHHH
Confidence 345789975 679998 999999998865322 221 4999999999761 25689
Q ss_pred HHHHHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhc----CCC-EEEEee
Q psy8674 345 TRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYS----DRK-IMTVPV 390 (439)
Q Consensus 345 a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~----~~~-~~v~~~ 390 (439)
|+|.|++.|+|+|++|||+|+.++++||+.+++.+++ ++. +++++.
T Consensus 65 a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~ 115 (249)
T 2nxv_A 65 WHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVA 115 (249)
T ss_dssp HHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESE
T ss_pred HHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeec
Confidence 9999999999999999999999999999999999987 244 455543
No 24
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.52 E-value=3.4e-14 Score=130.47 Aligned_cols=100 Identities=12% Similarity=0.126 Sum_probs=80.9
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhH--HHHHHHHHHHcCCcEEEEEcCCCCCHHHH
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADL--DQKLEDYIQRFNGKVRLIRNTEREGLIRT 345 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~--~~~~~~~~~~~~~~v~~i~~~~~~g~~~a 345 (439)
.+++|||||+||++ . .+|+++++|.+.++ |||+|||||+|.+. .++++++.+..+.++.+|+ .+|.|.+.|
T Consensus 52 ~~klSIVVPvYNEe-~---~lLesVl~qi~~d~--eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viH-Qkn~gls~A 124 (391)
T 2wvl_A 52 LEQTAIVVPTRNER-L---KLLEGVLSGIPHEA--LILVASNSSPDRFQMERDLLEEFAHLTERPALIFH-QKDPALAEA 124 (391)
T ss_dssp HTTEEEEEEESSCC-H---HHHHHHHHTSCTTS--EEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEE-TTCHHHHHH
T ss_pred HhceEEEEeccCcH-H---HHHHHHHhcCCCCc--eEEEEECCCCCChHhHHHHHHHHHhhcccceEEEe-ccChHHHHH
Confidence 45799999999999 5 46999999999887 99999999999983 2388899875455899995 677788888
Q ss_pred HH-H----------------------HHhhc---CCCEEEEEcCCCccCCCChHH
Q psy8674 346 RS-R----------------------GAKES---RGEVIVFLDAHCEVGLNWLPP 374 (439)
Q Consensus 346 ~n-~----------------------g~~~a---~~d~i~~ld~D~~~~~~~l~~ 374 (439)
+| . |+..| .++||.|+|+|+.++.+..+.
T Consensus 125 r~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Ey 179 (391)
T 2wvl_A 125 LRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEY 179 (391)
T ss_dssp HHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHH
T ss_pred HHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHH
Confidence 76 2 55665 799999999999996554443
No 25
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.47 E-value=1.5e-14 Score=137.56 Aligned_cols=147 Identities=17% Similarity=0.120 Sum_probs=92.4
Q ss_pred ecCCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCC-CeEeeeeeecccC-CCcccccccCCCCccc
Q psy8674 22 NTEREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR-KIMTVPVIDGIDY-QTWEFRSVYEPDHHYR 98 (439)
Q Consensus 22 ~~~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~ 98 (439)
+++|.|+++|+|.|++.|+|+||+|||+|+. +.|+||+.+++.+.+++ .+++.+....... +...... ....
T Consensus 113 ~~~n~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~-----~~~~ 187 (329)
T 3ckj_A 113 VPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGA-----GATG 187 (329)
T ss_dssp SCCCCSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC-------------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccc-----cccC
Confidence 7899999999999999999999999999999 89999999999976654 4555554332210 0000000 0000
Q ss_pred cccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhhHHHHHHHH-hCCc-EE
Q psy8674 99 GIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENFELSFKIWM-CGGS-IE 176 (439)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~Dl~~Rl~~-~G~~-i~ 176 (439)
++...... ........ ...........|+++++||++|+++| |+++| +||+||++|+.+ .|++ +.
T Consensus 188 ~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~ 254 (329)
T 3ckj_A 188 GGRVTELV------ARPLLAAL--RPELGCILQPLGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIA 254 (329)
T ss_dssp -CHHHHHT------HHHHHHHH--CGGGGGCSCTTCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEE
T ss_pred CCceehhh------HHHHHHHh--hhhhccccCCCccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEe
Confidence 00000000 00000000 00001122345778999999999997 88875 399999999987 6775 77
Q ss_pred Eecccceecc
Q psy8674 177 WVPCSRIVSL 186 (439)
Q Consensus 177 ~~p~~~v~H~ 186 (439)
..|.....|.
T Consensus 255 ~v~~~~r~h~ 264 (329)
T 3ckj_A 255 QVNLGVREHR 264 (329)
T ss_dssp EEEEEECEEC
T ss_pred eecceEEecC
Confidence 7776655554
No 26
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.47 E-value=1.5e-13 Score=132.49 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=83.4
Q ss_pred EEEEEecCCChhHHHHHHHHHHh-cCCcCCcceEEEEeCCCChhhHHHHHHHHHHHc----CCcEEEEEcC--C--CCCH
Q psy8674 272 SVILVFHNEGFSSLMRTVHSIIK-RTPAQYLEEIILVDDFSSKADLDQKLEDYIQRF----NGKVRLIRNT--E--REGL 342 (439)
Q Consensus 272 siiip~~n~~~~~l~~~l~sl~~-q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~----~~~v~~i~~~--~--~~g~ 342 (439)
||||+.+|++ .|..+++++.. +..+++ |||||||||+|+|.+ +++++..+. ..++.++... . |.|+
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~~~--EIIVVDDGStD~T~e-ia~~la~~~~~~~g~~vi~~~~~r~~~~n~Gk 76 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHPRV--HEVLCIGYERDQTYE-AVERAAPEISRATGTPVSVRLQERLGTLRPGK 76 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHSTTC--CEEEEEESSCCHHHH-HHHHHHHHHHHHHSCCEEEEECCCCSSSSSSH
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCCCe--EEEEEECcCCccHHH-HHHHhhhhcccccCCeEEEEecccCCCCCCCH
Confidence 4455555544 47778887752 334555 999999999999988 888554432 2233333222 3 7999
Q ss_pred HHHHHHHH----hhcCCCEEEEEcCCCc-cCCCChHHHHHhhhcCCCEEEEee
Q psy8674 343 IRTRSRGA----KESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPV 390 (439)
Q Consensus 343 ~~a~n~g~----~~a~~d~i~~ld~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 390 (439)
+.|++.|+ +.++||+++++|+|.. ++|+++..|++.+..+ .++|.+.
T Consensus 77 G~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g-~D~V~g~ 128 (397)
T 2bo4_A 77 GDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG-YGLVRHY 128 (397)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT-CSEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC-CCEEEEE
Confidence 99999999 8899999999999996 8999999999999765 4555553
No 27
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.35 E-value=2e-12 Score=119.63 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=66.9
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHH---hcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHH
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSII---KRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIR 344 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~---~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~ 344 (439)
.|+||||||+||++ +.|.+||+|+. +|++.++ |||||||+++ . .++.+.
T Consensus 64 ~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~~--EIiVVdds~d-~------------------------~f~~a~ 115 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLDY--GIYVINQAGD-T------------------------IFNRAK 115 (287)
T ss_dssp SCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCEE--EEEEEEECSS-S------------------------CCCHHH
T ss_pred CCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCCc--eEEEEEeCCC-C------------------------ccchhh
Confidence 57899999999999 99999999999 6887766 9999999432 1 125788
Q ss_pred HHHHHH----hhcCCCEEEEEcCCCccCCCCh
Q psy8674 345 TRSRGA----KESRGEVIVFLDAHCEVGLNWL 372 (439)
Q Consensus 345 a~n~g~----~~a~~d~i~~ld~D~~~~~~~l 372 (439)
++|.|+ +.|+||||+|+|+|+.+.+++.
T Consensus 116 a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~ 147 (287)
T 2fy7_A 116 LLNVGFQEALKDYDYTCFVFSDVDLIPMNDHN 147 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECTTEEESBTTS
T ss_pred hhhhHHHHHHHhCCCCEEEEECCCcccCCCcc
Confidence 999999 8999999999999999998873
No 28
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.33 E-value=2.9e-13 Score=130.67 Aligned_cols=152 Identities=11% Similarity=0.064 Sum_probs=96.7
Q ss_pred EEEecCCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCC-CeEeeeeeecccCCCcccccccCCCCc
Q psy8674 19 LIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR-KIMTVPVIDGIDYQTWEFRSVYEPDHH 96 (439)
Q Consensus 19 ~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 96 (439)
++.+++|.|.++|+|.|++.|+|+||+|||+|+. ++|+||..+++.+.+++ .+++.+................++
T Consensus 158 ~i~~~~n~G~g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g--- 234 (387)
T 3f1y_A 158 MSGYGDAHGKGDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGG--- 234 (387)
T ss_dssp TGGGCSCCSHHHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCS---
T ss_pred EecCCccCCHHHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCC---
Confidence 3445689999999999999999999999999999 89999999999998764 556655432211100000000000
Q ss_pred cccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccchhhHHHHHHH-HhCCc-
Q psy8674 97 YRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGGENFELSFKIW-MCGGS- 174 (439)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ED~Dl~~Rl~-~~G~~- 174 (439)
....+. ............. ......++++++||++++++ +|+++| +.|+++.+++. +.|++
T Consensus 235 --~v~~~~--------~~~l~~~~~~~l~--~~~d~~sG~~a~rR~~l~~i-~f~~gy----g~e~ell~~~~~~~G~~~ 297 (387)
T 3f1y_A 235 --RVTELT--------AKPLFNLFYPELA--GFVQPLAGEFVADRELFCSI-PFLTGY----AVETGIMIDVLKKVGLGA 297 (387)
T ss_dssp --HHHHHT--------HHHHHHHHCGGGT--TCSCTTCSCEEEEHHHHTTS-CEECST----THHHHHHHHHHHHHCGGG
T ss_pred --chhhhh--------HHHHHHHHhHhhc--cccccccccEEEEHHHHHhC-CCCCCc----chHHHHHHHHHHhcCCCe
Confidence 000000 0000000000000 12233577899999999999 687765 38999999985 56997
Q ss_pred EEEecccceecccccc
Q psy8674 175 IEWVPCSRIVSLIRPV 190 (439)
Q Consensus 175 i~~~p~~~v~H~~~~~ 190 (439)
|..+|-....|..+..
T Consensus 298 I~eVpi~~~~h~~~~~ 313 (387)
T 3f1y_A 298 MAQVDLGERQNRHQHL 313 (387)
T ss_dssp EEEEEEEECCCCCCCH
T ss_pred EEEEecceeecCCCCH
Confidence 9999988777755443
No 29
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.33 E-value=6.7e-12 Score=118.96 Aligned_cols=104 Identities=21% Similarity=0.266 Sum_probs=78.9
Q ss_pred CceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhh------HHHHHHHHHHHcCCcEEEEEcCC----
Q psy8674 269 PKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKAD------LDQKLEDYIQRFNGKVRLIRNTE---- 338 (439)
Q Consensus 269 p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t------~~~~~~~~~~~~~~~v~~i~~~~---- 338 (439)
.++|||||+|||+ ..+ |..++.+....+ |||||||||+|+| .+ +++.+....+..+.+++...
T Consensus 51 ~~iSVVIP~yNEE-~~l---I~~vL~~i~~~~--eIIvVDDgSrD~tD~~~~~~~-~l~~~~~~~~~~~~Vl~~~~p~v~ 123 (394)
T 2zu9_A 51 GKMAVIVPMKNEK-LHL---VDGVLKAIPHKC--PIIIVSNSKREGPNRYKLEVD-LIRHFYNLTHSKIIMIHQKDPGLA 123 (394)
T ss_dssp TTEEEEEEESSCC-HHH---HHHHHHHSCTTS--CEEEEECCCCSSSCHHHHHHH-HHHHHHHHHCCCEEEEETTCHHHH
T ss_pred CCEEEEEecCccc-HHH---HHHHHHcCCCCc--EEEEEECcCcccccchhhHHH-HHHHHhhccccceEEEecCCcchh
Confidence 3699999999999 554 556666554444 9999999997776 45 67777665455677776543
Q ss_pred ------------------CCCHHHHHHHHHhhc---CCCEEEEEcCCCccCCCChHHHHHhhh
Q psy8674 339 ------------------REGLIRTRSRGAKES---RGEVIVFLDAHCEVGLNWLPPLLAPIY 380 (439)
Q Consensus 339 ------------------~~g~~~a~n~g~~~a---~~d~i~~ld~D~~~~~~~l~~l~~~~~ 380 (439)
+.|++.|+-.|+..| ++++|+|+|+|. ..|..+..+++.+.
T Consensus 124 ~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 124 KAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 249999999999999 999999999999 55666666666544
No 30
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.06 E-value=6.9e-10 Score=104.48 Aligned_cols=113 Identities=14% Similarity=0.213 Sum_probs=84.1
Q ss_pred CceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEE---------cCCC
Q psy8674 269 PKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIR---------NTER 339 (439)
Q Consensus 269 p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~---------~~~~ 339 (439)
+.++|||++||+. + |.+||+||++|.+.....+|||.|||+.+++.+ +++.+.. .+..+. .++|
T Consensus 2 ~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~-vi~~~~~----~I~~~~~~d~~~~~~~~~N 74 (343)
T 1fo8_A 2 AVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQ-VIASYGS----AVTHIRQPDLSNIAVQPDH 74 (343)
T ss_dssp CCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHH-HHHTTGG----GSEEEECSCCCCCCCCTTC
T ss_pred CcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHH-HHHHcCC----ceEEEEcCCccccccchhh
Confidence 4689999999999 8 999999999998543334999999999887755 6666532 244432 3445
Q ss_pred CCHH----------HHHHHHHhhcCCCEEEEEcCCCccCCCChHHHHH---hhhcCCCEEEE
Q psy8674 340 EGLI----------RTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLA---PIYSDRKIMTV 388 (439)
Q Consensus 340 ~g~~----------~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~---~~~~~~~~~v~ 388 (439)
.|.. .++|.++..++++++++||+|+.+.|++++-+.+ .++.++.+..+
T Consensus 75 ~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~I 136 (343)
T 1fo8_A 75 RKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCV 136 (343)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEE
T ss_pred cCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEE
Confidence 5543 5777777777899999999999999999965544 44566665443
No 31
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.94 E-value=1.1e-08 Score=91.33 Aligned_cols=128 Identities=14% Similarity=0.153 Sum_probs=86.2
Q ss_pred HHHHHHhcC--CcEEEEEecC--CCChhHHHHhhhhhcc--CcEEEEecCCcccCCCchHHHHHHHhcCCCeEeeeeeec
Q psy8674 6 LEDYIERFN--GKVRLIRNTE--REGLIRTRSRGAKESR--GEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVPVIDG 79 (439)
Q Consensus 6 l~~~~~~~~--~~i~~i~~~~--n~G~a~arN~G~~~A~--g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~ 79 (439)
+..|+++.. -.|-||.-.. .+..|...|.|+..|. -|+++|-|.|.++..+... -.++..
T Consensus 73 lhp~L~rQ~l~y~I~VieQ~~~~~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n~------------Y~c~~~-- 138 (287)
T 3lw6_A 73 MTAFLKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNLL------------YEYPSS-- 138 (287)
T ss_dssp HHHHHHHTTCEEEEEEEEECSSSCCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTSC------------CCCCCT--
T ss_pred HHHHHHHcCCceEEEEEecCCCCccchhheecccHHHHhccCCEEEEecccccccCCCcc------------ccCCCC--
Confidence 456666543 2566666332 3567899999999886 5999999999988654210 011100
Q ss_pred ccCCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCCCCCCCccc
Q psy8674 80 IDYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYDPGLLVWGG 159 (439)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfde~~~~~~~ 159 (439)
.... +.. ...+...+ ....+.|++++++|+.|.++||||+.|..||+
T Consensus 139 --~~P~-Hls--------~~~~~~~~----------------------~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGg 185 (287)
T 3lw6_A 139 --LGPL-HIA--------GPKLHPKY----------------------HYDNFVGGILLVRREHFKQMNGMSNQYWGWGL 185 (287)
T ss_dssp --TCCE-ESS--------CTTTCSSC----------------------CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSS
T ss_pred --CCce-EEe--------eccccCCC----------------------CcCCccccEEeccHHHHHHcCCCCCcCcCCCc
Confidence 0000 000 00111111 12245789999999999999999999999999
Q ss_pred hhhHHHHHHHHhCCcEEEecc
Q psy8674 160 ENFELSFKIWMCGGSIEWVPC 180 (439)
Q Consensus 160 ED~Dl~~Rl~~~G~~i~~~p~ 180 (439)
||.||..|+..+|+++...+.
T Consensus 186 EDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 186 EDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp HHHHHHHHHHHTTCCCBCCSS
T ss_pred cchHHHHHHHHcCCcEEcCCC
Confidence 999999999999999877654
No 32
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.62 E-value=3.8e-07 Score=87.81 Aligned_cols=132 Identities=17% Similarity=0.104 Sum_probs=81.9
Q ss_pred CCChhHHHHhhh----hhccCcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEeeeeeecccCCCcccccccCCCCcccc
Q psy8674 25 REGLIRTRSRGA----KESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPVIDGIDYQTWEFRSVYEPDHHYRG 99 (439)
Q Consensus 25 n~G~a~arN~G~----~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (439)
|.|.++|.+.|+ +.|+||+|+|+|+|.. .+|+++..|++.+.++ .++|.+.......+ +
T Consensus 73 n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g-~D~V~g~~~r~~~~---------------~ 136 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG-YGLVRHYFPRASTD---------------A 136 (397)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT-CSEEEEECCCCTTS---------------C
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC-CCEEEEEeccccCC---------------c
Confidence 899999999999 8999999999999997 8999999999998754 55554431110000 0
Q ss_pred ccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCCC--CCCCCccchhhHHHHHHHHhCCcEEE
Q psy8674 100 IFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGYD--PGLLVWGGENFELSFKIWMCGGSIEW 177 (439)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgfd--e~~~~~~~ED~Dl~~Rl~~~G~~i~~ 177 (439)
.+.+.+ ........-............++.++++|++++++.... +....|| .|+++..++.+.|++|..
T Consensus 137 ~~~~~~-------~~~ll~~~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg-~eiel~~~a~~~G~rI~E 208 (397)
T 2bo4_A 137 MITWMI-------TRTGFALLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWG-IDTLYTFVTVQQGVSIYE 208 (397)
T ss_dssp HHHHHT-------HHHHHHHHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTT-HHHHHHHHHHHTTCCEEE
T ss_pred HHHHHH-------HHHHHHHHHHHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCcc-hHHHHHHHHHHcCCEEEE
Confidence 000000 000000000000001111224566799999999984311 0111233 799999999999999998
Q ss_pred ecc
Q psy8674 178 VPC 180 (439)
Q Consensus 178 ~p~ 180 (439)
+|-
T Consensus 209 Vpi 211 (397)
T 2bo4_A 209 CYI 211 (397)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 33
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=98.23 E-value=5.2e-06 Score=69.75 Aligned_cols=145 Identities=11% Similarity=0.097 Sum_probs=85.5
Q ss_pred HHHHHHhcCCcEEEEEecCCCChhHHHHhhhhh----ccCcEEEEecCC---cccCCCchHHHHHHHhcCCCeEeeeeee
Q psy8674 6 LEDYIERFNGKVRLIRNTEREGLIRTRSRGAKE----SRGEVIVFLDAH---CEVGLNWLPPLLAPIYSDRKIMTVPVID 78 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~----A~g~~i~flD~D---~~~~~~~l~~l~~~~~~~~~~~v~~~~~ 78 (439)
|...+.+..-.+++... ..=++.|||..+.. .+.++++|+|+| .-.+|+.+.+++ + .+.++|++...
T Consensus 17 l~~~l~~~gi~~~l~~~--~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl---~-~g~DVV~GsYp 90 (203)
T 2c0n_A 17 LIDFLVKNDIEYVILSR--RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF---N-EGYDVVCGYYY 90 (203)
T ss_dssp HHHHHHHTTCCEEEECC--CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH---H-HTCSEEEEECB
T ss_pred HHHHHHhCCCeEEEEcc--ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH---h-CCCCEEEEEee
Confidence 34445554445777765 44688999999876 356999999999 888999888887 3 24445543321
Q ss_pred cccCCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHHHHHHhC--CC----CC
Q psy8674 79 GIDYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELG--GY----DP 152 (439)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iG--gf----de 152 (439)
.-.... ... +.-.+. ......++....+++++++|++|+++- .| +|
T Consensus 91 ~K~~~~--~s~---------~a~~y~-----------------~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~ 142 (203)
T 2c0n_A 91 LKTLRG--YSV---------YRKDWE-----------------KEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPI 142 (203)
T ss_dssp CTTSSS--BSE---------ESSSBC-----------------SSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC----
T ss_pred ccCCCc--cch---------HHHHHH-----------------HhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChh
Confidence 110000 000 000010 011122455667789999999999983 33 11
Q ss_pred CCCCccchhhHHHHHHHHhCCcEEEecccceeccc
Q psy8674 153 GLLVWGGENFELSFKIWMCGGSIEWVPCSRIVSLI 187 (439)
Q Consensus 153 ~~~~~~~ED~Dl~~Rl~~~G~~i~~~p~~~v~H~~ 187 (439)
...-+-+||+.||.-+..+|+.+ |..+.+|.-
T Consensus 143 e~~~~~gEdv~F~~~~k~~~~~~---~~~~~~~~~ 174 (203)
T 2c0n_A 143 ESPHWIGEDVYFFSTHKPRTYAL---SSLKAYHFI 174 (203)
T ss_dssp -----CCHHHHHHHHHCCCEEEE---EEEEEEEES
T ss_pred hhccccCCceEEEeccccccccc---cccccceee
Confidence 12123359999999998888875 344444443
No 34
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.49 E-value=0.00074 Score=63.41 Aligned_cols=147 Identities=13% Similarity=0.089 Sum_probs=80.5
Q ss_pred HHHHHHHhcCCcEEEEE---------ecCCCChh----------HHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHH
Q psy8674 5 KLEDYIERFNGKVRLIR---------NTEREGLI----------RTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPI 65 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~---------~~~n~G~a----------~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~ 65 (439)
.+.+.++.+..+|+.+. .++|.|+. .|.|..+..+++++++||+.|+++.|+|++-+.+.+
T Consensus 45 ~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l 124 (343)
T 1fo8_A 45 ETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATY 124 (343)
T ss_dssp HHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHH
Confidence 34555555433455543 35566753 577777777799999999999999999996655555
Q ss_pred ---hcCCCeEeeeeeecccCCCcccccccCCCCccccccccccccccCCCchHHHhhccCCCCCccCccccceEEEEeHH
Q psy8674 66 ---YSDRKIMTVPVIDGIDYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPEREAKKRKYNSEPYKSPTHAGGLFAMDRA 142 (439)
Q Consensus 66 ---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 142 (439)
+.++....... .......... . .........+.++.|-.++..|+
T Consensus 125 ~~y~~D~~I~~ISa---~n~~g~~~~~------------~-----------------~~~~~~lyrs~~f~~wGWa~wr~ 172 (343)
T 1fo8_A 125 PLLKADPSLWCVSA---WNDNGKEQMV------------D-----------------SSKPELLYRTDFFPGLGWLLLAE 172 (343)
T ss_dssp HHHHHCTTEEEEES---CCTTCBGGGS------------C-----------------TTCTTCEEEESSCCCSSEEEEHH
T ss_pred HHhhcCCcEEEEec---ccCccccccc------------c-----------------ccCcceEEeecCCCchhhhhcHH
Confidence 55555433211 1111000000 0 00001112333445666899999
Q ss_pred HHHHhCCCCCCCCCccchhhHHHHHH--HHhCCcEEEeccc-ceecccccc
Q psy8674 143 FFLELGGYDPGLLVWGGENFELSFKI--WMCGGSIEWVPCS-RIVSLIRPV 190 (439)
Q Consensus 143 ~f~~iGgfde~~~~~~~ED~Dl~~Rl--~~~G~~i~~~p~~-~v~H~~~~~ 190 (439)
.|++ |++.+. ....|..+|. ...|. ....|+. ++.|+....
T Consensus 173 ~W~e---~~~~wp---~~~Wd~w~r~~~~~~~r-~ci~P~vsrv~n~G~~G 216 (343)
T 1fo8_A 173 LWAE---LEPKWP---KAFWDDWMRRPEQRKGR-ACVRPEISRTMTFGRKG 216 (343)
T ss_dssp HHHH---HGGGCC---SSCHHHHHTSHHHHTTC-EEEEESSBSEEECC---
T ss_pred HHHH---Hhhhcc---hhHHHHHHHHHHHhCCC-EEEEeccceeEeccccC
Confidence 9987 455542 2356666653 33444 4455555 478875443
No 35
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=97.25 E-value=0.00029 Score=65.18 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=45.6
Q ss_pred hHHHHHHHHhcCCcEEEEEecCCCChhHHHH-h----------------------hhhhc---cCcEEEEecCCcccCCC
Q psy8674 3 DKKLEDYIERFNGKVRLIRNTEREGLIRTRS-R----------------------GAKES---RGEVIVFLDAHCEVGLN 56 (439)
Q Consensus 3 ~~~l~~~~~~~~~~i~~i~~~~n~G~a~arN-~----------------------G~~~A---~g~~i~flD~D~~~~~~ 56 (439)
.+.+++|.+.-..+|.+|+ ++|.|+|.||| . |+..| .|+||.|+|+|..++.+
T Consensus 97 ~dil~~~~~~~~~ri~viH-Qkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~ 175 (391)
T 2wvl_A 97 RDLLEEFAHLTERPALIFH-QKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGA 175 (391)
T ss_dssp HHHHHHHHHHTTCCEEEEE-TTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHH
T ss_pred HHHHHHHHhhcccceEEEe-ccChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccC
Confidence 3577888874224899996 99999999997 4 55666 69999999999999766
Q ss_pred chHHH
Q psy8674 57 WLPPL 61 (439)
Q Consensus 57 ~l~~l 61 (439)
..+.+
T Consensus 176 v~Eyv 180 (391)
T 2wvl_A 176 VWEYV 180 (391)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 36
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=95.60 E-value=0.019 Score=52.03 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=79.1
Q ss_pred CceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHH
Q psy8674 269 PKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSR 348 (439)
Q Consensus 269 p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~ 348 (439)
..+||||-+|++. +.|.+.|+.+..... ..||+||=++......+.....+ ...+..++++....|. . ..+-.
T Consensus 28 ~~FTvvi~ty~R~-~~L~~lv~~~~~~~~---v~~IvVvWn~~~~~pp~~~~~~~-~~~~vpv~v~~~~~ns-L-nnRF~ 100 (293)
T 1omz_A 28 DSFTLIMQTYNRT-DLLLRLLNHYQAVPS---LHKVIVVWNNVGEKGPEELWNSL-GPHPIPVIFKPQTANK-M-RNRLQ 100 (293)
T ss_dssp TCEEEEEEESSCH-HHHHHHHHHHTTSTT---EEEEEEEECCTTCCCTHHHHHHT-CCCSSCEEEEECSSCC-G-GGGGS
T ss_pred CceEEEEEeeccc-HHHHHHHHHHhcCCC---CCeEEEEeCCCCCCCChhhcccc-CCCCccEEEEeCCCCc-h-hhccC
Confidence 4799999999998 999999887754332 44999998776433222122221 1112358888776663 1 22222
Q ss_pred HHhhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEE
Q psy8674 349 GAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTV 388 (439)
Q Consensus 349 g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~ 388 (439)
-....+++.|+.+|+|..++.+.|+......++.+..+|+
T Consensus 101 p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG 140 (293)
T 1omz_A 101 VFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 140 (293)
T ss_dssp CCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred CCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence 3345679999999999999999999999999998887776
No 37
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=95.44 E-value=0.15 Score=44.74 Aligned_cols=102 Identities=20% Similarity=0.245 Sum_probs=64.4
Q ss_pred CCceEEEEEecCCCh--hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC--CC---
Q psy8674 268 LPKASVILVFHNEGF--SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE--RE--- 340 (439)
Q Consensus 268 ~p~vsiiip~~n~~~--~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~--~~--- 340 (439)
+|.|-||.|||.+.. ..|.+.-++|.. . +++ -.|||+|+..-. + .+.++.++.+-..+.+..+. ++
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~-V-p~l--~WIVVEd~~~~~--~-~v~~lL~~sgl~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQ-V-AQL--HWILVEDAAARS--E-LVSRFLARAGLPSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTT-S-TTE--EEEEEESSSSCC--H-HHHHHHHHSCSCEEEEECCCCCC----
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhc-C-Cce--EEEEEcCCCCCC--H-HHHHHHHHcCCceEEEecCCccccCCC
Confidence 578999999999861 344555555543 2 345 889999987532 1 34445555443455554332 11
Q ss_pred ---CHHHHHHHHHhhcC---------CCEEEEEcCCCccCCCChHHHH
Q psy8674 341 ---GLIRTRSRGAKESR---------GEVIVFLDAHCEVGLNWLPPLL 376 (439)
Q Consensus 341 ---g~~~a~n~g~~~a~---------~d~i~~ld~D~~~~~~~l~~l~ 376 (439)
--...+|.|++..+ .-++.|.|+|..++-..+++|.
T Consensus 75 ~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 75 GLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred CCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 12478999986432 3688999999998877777643
No 38
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=94.90 E-value=0.14 Score=45.59 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=59.7
Q ss_pred CCCCceEEEEEecCCCh--hHHHHHHHHHHhcCCcCCcceEEEEeCCCC-hhhHHHHHHHHHHHcCCcEEEEEcCCCCC-
Q psy8674 266 LDLPKASVILVFHNEGF--SSLMRTVHSIIKRTPAQYLEEIILVDDFSS-KADLDQKLEDYIQRFNGKVRLIRNTEREG- 341 (439)
Q Consensus 266 ~~~p~vsiiip~~n~~~--~~l~~~l~sl~~q~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~~~~v~~i~~~~~~g- 341 (439)
...|.|-||.|||.+.. ..|.+.-+.|.. . +++ -.|||+|+.. .. .+.++.++.+-..+.+..+.+.+
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~-V-p~L--~WIVVEd~~~~t~----~va~lL~rsGl~y~HL~~~~p~~~ 89 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTLSL-V-PRL--HWLLVEDAEGPTP----LVSGLLAASGLLFTHLVVLTPKAQ 89 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHHTT-S-SSE--EEEEEESSSSCCH----HHHHHHHHHCSEEEEEECCCC---
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHHhc-C-Cce--EEEEEcCCCCCCH----HHHHHHHHcCCceEEeccCCCccc
Confidence 46789999999998861 334444444443 2 355 8899999753 22 22333333333344444332211
Q ss_pred -------------HHHHHHHHHhhcC-----------------CCEEEEEcCCCccCCCChHHH
Q psy8674 342 -------------LIRTRSRGAKESR-----------------GEVIVFLDAHCEVGLNWLPPL 375 (439)
Q Consensus 342 -------------~~~a~n~g~~~a~-----------------~d~i~~ld~D~~~~~~~l~~l 375 (439)
-...+|.|++..+ .-+|.|.|+|..++-..+++|
T Consensus 90 ~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 90 RLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp --------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 1467999996544 247889999988877666653
No 39
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=94.45 E-value=0.12 Score=45.56 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=62.0
Q ss_pred CCceEEEEEecCCCh--hHHHHHHHHHHhcCCcCCcceEEEEeCCCC-hhhHHHHHHHHHHHcCCcEEEEEcCCC-----
Q psy8674 268 LPKASVILVFHNEGF--SSLMRTVHSIIKRTPAQYLEEIILVDDFSS-KADLDQKLEDYIQRFNGKVRLIRNTER----- 339 (439)
Q Consensus 268 ~p~vsiiip~~n~~~--~~l~~~l~sl~~q~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~~~~v~~i~~~~~----- 339 (439)
+|.|-||.|||.+.. ..|.+..++|.. .+++ -.|||+|+.. .. .+.++.++.+-..+.+..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~L--~WIVVEd~~~~t~----~va~lL~~sgl~y~HL~~~~p~~~~~ 73 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VPNL--HWLVVEDAPRRTP----LTARLLRDTGLNYTHLHVETPRNYKL 73 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SSSE--EEEEEESSSSCCH----HHHHHHHHHCCEEEEEECCCCHHHHC
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CCce--EEEEEeCCCCCCH----HHHHHHHHcCCceEEeecCCCccccc
Confidence 578999999998862 445555566642 2455 8899999653 22 223333333333444433311
Q ss_pred ---------CCHHHHHHHHHhhcC---------CCEEEEEcCCCccCCCChHHHH
Q psy8674 340 ---------EGLIRTRSRGAKESR---------GEVIVFLDAHCEVGLNWLPPLL 376 (439)
Q Consensus 340 ---------~g~~~a~n~g~~~a~---------~d~i~~ld~D~~~~~~~l~~l~ 376 (439)
.--...+|.|++..+ .-+|.|.|+|..++-..+++|-
T Consensus 74 ~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 74 RGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp C-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred cccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 012468999986542 3588999999888776666643
No 40
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.25 E-value=0.059 Score=51.10 Aligned_cols=40 Identities=15% Similarity=-0.008 Sum_probs=32.7
Q ss_pred CChhHHHHhhhhhc---cCcEEEEecCCcccCCCchHHHHHHHh
Q psy8674 26 EGLIRTRSRGAKES---RGEVIVFLDAHCEVGLNWLPPLLAPIY 66 (439)
Q Consensus 26 ~G~a~arN~G~~~A---~g~~i~flD~D~~~~~~~l~~l~~~~~ 66 (439)
.|.++|.=.|+..| +|++|+|+|+|. ..|..+..+++.+.
T Consensus 143 ~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 143 SGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp CSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 49999999999999 999999999999 55666666665544
No 41
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=93.94 E-value=0.62 Score=41.41 Aligned_cols=89 Identities=11% Similarity=0.180 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc---CCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES---RGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a---~~d~i~ 359 (439)
..|..+++.+..... . +|+|+-+ ++ .+.++...++..+.+...+...|.+.+. .+++.. ..+.++
T Consensus 28 Pli~~~l~~l~~~~~--~--~ivVv~~---~~----~i~~~~~~~g~~v~~~~~~~~~Gt~~~~-~~~~~l~~~~~d~vl 95 (252)
T 3oam_A 28 PMIQWVYEQAMQAGA--D--RVIIATD---DE----RVEQAVQAFGGVVCMTSPNHQSGTERLA-EVVAKMAIPADHIVV 95 (252)
T ss_dssp EHHHHHHHHHHHTTC--S--EEEEEES---CH----HHHHHHHHTTCEEEECCTTCCSHHHHHH-HHHHHTTCCTTSEEE
T ss_pred EHHHHHHHHHHhCCC--C--eEEEECC---HH----HHHHHHHHcCCEEEEcCCCCCCcHHHHH-HHHHhcCcCCCCEEE
Confidence 588888888876542 2 7777764 12 3344444444333333233445666543 344443 578999
Q ss_pred EEcCCCc-cCCCChHHHHHhhhcCC
Q psy8674 360 FLDAHCE-VGLNWLPPLLAPIYSDR 383 (439)
Q Consensus 360 ~ld~D~~-~~~~~l~~l~~~~~~~~ 383 (439)
++++|.- +++..+..+++.+.+..
T Consensus 96 v~~gD~Pli~~~~i~~l~~~~~~~~ 120 (252)
T 3oam_A 96 NVQGDEPLIPPAIIRQVADNLAACS 120 (252)
T ss_dssp ECCTTCTTCCHHHHHHHHHHHHHSS
T ss_pred EEeCCeeecCHHHHHHHHHHHHhcC
Confidence 9999995 57899999999887644
No 42
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=93.80 E-value=0.22 Score=44.55 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=55.4
Q ss_pred CceEEEEEecCCChhHHHHHHHHHH----hcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHH
Q psy8674 269 PKASVILVFHNEGFSSLMRTVHSII----KRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIR 344 (439)
Q Consensus 269 p~vsiiip~~n~~~~~l~~~l~sl~----~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~ 344 (439)
-+|.||||.+|++ +.|...|..+. +|. ..+.|+||+... ...++.+.
T Consensus 51 ~kvAIIIPyRdR~-~hL~~fl~~lhp~L~rQ~---l~y~I~VieQ~~-------------------------~~~FNRa~ 101 (287)
T 3lw6_A 51 HKMALLVPFRDRF-EELLQFVPHMTAFLKRQG---VAHHIFVLNQVD-------------------------RFRFNRAS 101 (287)
T ss_dssp CEEEEEEEESSCH-HHHHHHHHHHHHHHHHTT---CEEEEEEEEECS-------------------------SSCCCHHH
T ss_pred ceEEEEEEeCCHH-HHHHHHHHHHHHHHHHcC---CceEEEEEecCC-------------------------CCccchhh
Confidence 4799999999999 88888775543 342 234888886521 13456899
Q ss_pred HHHHHHhhcC--CCEEEEEcCCCccCCCC
Q psy8674 345 TRSRGAKESR--GEVIVFLDAHCEVGLNW 371 (439)
Q Consensus 345 a~n~g~~~a~--~d~i~~ld~D~~~~~~~ 371 (439)
.+|.|+..|. .|+++|-|.|..+..+.
T Consensus 102 LlNvGf~ea~~~~d~~ifHDVDLlP~dd~ 130 (287)
T 3lw6_A 102 LINVGFQFASDVYDYIAMHDVDLLPLNDN 130 (287)
T ss_dssp HHHHHHHHSCTTCCEEEEECTTEEECCTT
T ss_pred eecccHHHHhccCCEEEEecccccccCCC
Confidence 9999999876 69999999998876553
No 43
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=93.26 E-value=0.14 Score=43.06 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=28.9
Q ss_pred HHHHHHHHHhh----cCCCEEEEEcCC---CccCCCChHHHH
Q psy8674 342 LIRTRSRGAKE----SRGEVIVFLDAH---CEVGLNWLPPLL 376 (439)
Q Consensus 342 ~~~a~n~g~~~----a~~d~i~~ld~D---~~~~~~~l~~l~ 376 (439)
...|||..+.. ...++++|+|+| ..++|+.+.+|+
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl 78 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF 78 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH
Confidence 55677766654 557999999999 999999999998
No 44
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=93.11 E-value=1 Score=40.10 Aligned_cols=88 Identities=19% Similarity=0.278 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc---CCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES---RGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a---~~d~i~ 359 (439)
..|..+++.+.+.. . .+|+|+-+ ++ .+.++...++..+.+...+...|.+. ...+++.. ..++++
T Consensus 35 Pli~~~l~~l~~~~-i---~~VvVvt~---~~----~i~~~~~~~g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vl 102 (256)
T 3tqd_A 35 PMIQHVYESAIKSG-A---EEVVIATD---DK----RIRQVAEDFGAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIV 102 (256)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEES---CH----HHHHHHHHTTCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEE
T ss_pred hHHHHHHHHHHhCC-C---CEEEEECC---HH----HHHHHHHHcCCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEE
Confidence 47788888887643 1 27877754 12 33344444443333222233455554 44566654 579999
Q ss_pred EEcCCCc-cCCCChHHHHHhhhcC
Q psy8674 360 FLDAHCE-VGLNWLPPLLAPIYSD 382 (439)
Q Consensus 360 ~ld~D~~-~~~~~l~~l~~~~~~~ 382 (439)
++++|.- +++..+..+++.+.++
T Consensus 103 v~~gD~Pli~~~~i~~li~~~~~~ 126 (256)
T 3tqd_A 103 CLQGDEPLIPPDAIRKLAEDLDEH 126 (256)
T ss_dssp EECTTCCCCCHHHHHHHHHHHHHC
T ss_pred EEeCCcccCCHHHHHHHHHHHHhC
Confidence 9999995 5789999999998764
No 45
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=93.07 E-value=0.28 Score=43.72 Aligned_cols=66 Identities=9% Similarity=0.115 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCCcEEEEE--ecCCCChhHHHHhhhhhc---cCcEEEEecCCcc-cCCCchHHHHHHHhcCCCeE
Q psy8674 4 KKLEDYIERFNGKVRLIR--NTEREGLIRTRSRGAKES---RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIM 72 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~--~~~n~G~a~arN~G~~~A---~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~ 72 (439)
+.+.++++++. ++++. .+...|.+++... ++.. ..+.++++++|.- +++..++.+++.+.+....+
T Consensus 52 ~~i~~~~~~~g--~~v~~~~~~~~~Gt~~~~~~-~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~ 123 (252)
T 3oam_A 52 ERVEQAVQAFG--GVVCMTSPNHQSGTERLAEV-VAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPM 123 (252)
T ss_dssp HHHHHHHHHTT--CEEEECCTTCCSHHHHHHHH-HHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSE
T ss_pred HHHHHHHHHcC--CEEEEcCCCCCCcHHHHHHH-HHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCE
Confidence 45677777765 44443 3355677665443 3333 5789999999994 68999999999987654433
No 46
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=93.04 E-value=0.59 Score=41.92 Aligned_cols=88 Identities=11% Similarity=0.146 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEE--cCCCCCHHHHHHHHHhhc---CCCE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIR--NTEREGLIRTRSRGAKES---RGEV 357 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~--~~~~~g~~~a~n~g~~~a---~~d~ 357 (439)
..|..+++.+.+.. . .+|+|+-+ ++ .+.++...++ +.++. .....|.+. ...+++.. ..++
T Consensus 44 Pmi~~~l~~l~~~~-i---~~IvV~t~---~~----~i~~~~~~~g--~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~ 109 (264)
T 3k8d_A 44 PMIVHVLERARESG-A---ERIIVATD---HE----DVARAVEAAG--GEVCMTRADHQSGTER-LAEVVEKCAFSDDTV 109 (264)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEES---CH----HHHHHHHHTT--CEEEECCTTCCSHHHH-HHHHHHHHTCCTTCE
T ss_pred EHHHHHHHHHHhCC-C---CEEEEECC---HH----HHHHHHHHcC--CEEEEecCCCCCCHHH-HHHHHHHhccCCCCE
Confidence 46777888877643 2 27877764 22 2334444444 44443 333445444 34444443 5799
Q ss_pred EEEEcCCCc-cCCCChHHHHHhhhcCCC
Q psy8674 358 IVFLDAHCE-VGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 358 i~~ld~D~~-~~~~~l~~l~~~~~~~~~ 384 (439)
++++++|.- +++..+..+++.+.+...
T Consensus 110 vlv~~gD~Pli~~~~i~~li~~~~~~~~ 137 (264)
T 3k8d_A 110 IVNVQGDEPMIPATIIRQVADNLAQRQV 137 (264)
T ss_dssp EEEECTTCTTCCHHHHHHHHHHHHTSSC
T ss_pred EEEEcCCcccCCHHHHHHHHHHHhhcCC
Confidence 999999996 578999999999876554
No 47
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=92.42 E-value=1.7 Score=37.75 Aligned_cols=90 Identities=9% Similarity=0.089 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-----CCCCHHHHHHHHHhhc-CCC
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-----EREGLIRTRSRGAKES-RGE 356 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-----~~~g~~~a~n~g~~~a-~~d 356 (439)
..|..+++.+.+...-+ +|+|+-+ ++ .+.++...++ +.++..+ ...+...+...|++.. ..+
T Consensus 29 pli~~~i~~~~~~~~~~---~ivv~~~---~~----~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d 96 (229)
T 1qwj_A 29 PLIGWVLRAALDAGVFQ---SVWVSTD---HD----EIENVAKQFG--AQVHRRSSETSKDSSTSLDAIVEFLNYHNEVD 96 (229)
T ss_dssp EHHHHHHHHHHHHTCCS---EEEEEES---CH----HHHHHHHHTT--CEEEECCGGGSSTTCCHHHHHHHHHTTCTTCS
T ss_pred EHHHHHHHHHHhCCCcC---EEEEECC---hH----HHHHHHHHcC--CEEEeChhhhcCCCCcHHHHHHHHHHhcCCCC
Confidence 57888888887654212 7777763 12 2333344443 4555443 2234445666777776 579
Q ss_pred EEEEEcCCCcc-CCCChHHHHHhhhcCCC
Q psy8674 357 VIVFLDAHCEV-GLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 357 ~i~~ld~D~~~-~~~~l~~l~~~~~~~~~ 384 (439)
+++++++|.-+ ++..+..+++.+...+.
T Consensus 97 ~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 125 (229)
T 1qwj_A 97 IVGNIQATSPCLHPTDLQKVAEMIREEGY 125 (229)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHSSCC
T ss_pred EEEEecCCCCcCCHHHHHHHHHHHHhCCC
Confidence 99999999874 78899999998876554
No 48
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=92.39 E-value=1 Score=40.43 Aligned_cols=93 Identities=8% Similarity=0.132 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHH---HcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQ---RFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~ 359 (439)
..|..+|+++.+... .+|+||-+...... + .++.. .++..+.++..+...|.+.+...++.....+.++
T Consensus 56 pli~~~l~~l~~~g~----~~iivv~~~~~~~~---~-~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~l 127 (269)
T 4ecm_A 56 PMIYHAVYKLKQCDI----TDIMIITGKEHMGD---V-VSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMV 127 (269)
T ss_dssp EHHHHHHHHHHHTTC----CEEEEEECTTTHHH---H-HHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEE
T ss_pred EHHHHHHHHHHHCCC----CEEEEECChhhHHH---H-HHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEE
Confidence 688899999887532 27777765432222 2 22222 2233566666667789999999888877788999
Q ss_pred EEcCCCccCCCChHHHHHhhhcCCC
Q psy8674 360 FLDAHCEVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 360 ~ld~D~~~~~~~l~~l~~~~~~~~~ 384 (439)
++.+|..+. ..+..+++.+.+...
T Consensus 128 v~~~D~~~~-~~l~~l~~~~~~~~~ 151 (269)
T 4ecm_A 128 VILGDNIFS-DDIRPYVEEFTNQKE 151 (269)
T ss_dssp EEETTEEES-SCSHHHHHHHHTSSS
T ss_pred EEeCCccCc-cCHHHHHHHHHhcCC
Confidence 999999775 678888888765443
No 49
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=92.17 E-value=1.9 Score=38.86 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=71.9
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCC--C----
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTERE--G---- 341 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~--g---- 341 (439)
++.+.|++.+-+.-...+..++.||+..+.. ....+.|+.++-+++..+ .++++.+.++..+.++..+... +
T Consensus 3 ~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~-~L~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (276)
T 3tzt_A 3 AMADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLK-DLGEDLKKFSYTLYPIRATDDLFSFAKVT 80 (276)
T ss_dssp --CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHH-HHHHHHHTTTCEEEEEECC----------
T ss_pred ceeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHH-HHHHHHHHcCCEEEEEEeCHHHHhcCccc
Confidence 4568888777655447788899999987653 233788888887777655 7777777665567776554321 0
Q ss_pred -----HHHHHHHHHhhc--CCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEe
Q psy8674 342 -----LIRTRSRGAKES--RGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVP 389 (439)
Q Consensus 342 -----~~~a~n~g~~~a--~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~ 389 (439)
....+-..-... .-+-+++||+|..+..+ +.+|.+.=..+...++++
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d-i~~L~~~dl~~~~~aav~ 134 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP-LDDLLRTDISDYILAAAS 134 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC-SHHHHTCCCTTSSEEEEE
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC-HHHHhhcCCCCCeEEEEE
Confidence 111222222233 36899999999988654 666665312233344444
No 50
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=91.63 E-value=0.77 Score=40.94 Aligned_cols=160 Identities=17% Similarity=0.200 Sum_probs=82.4
Q ss_pred HHHHHHHHhcCCcEEEEEe--cCCCChhHHHHhhhhhc---cCcEEEEecCCcc-cCCCchHHHHHHHhcCCC-eEeeee
Q psy8674 4 KKLEDYIERFNGKVRLIRN--TEREGLIRTRSRGAKES---RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRK-IMTVPV 76 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~--~~n~G~a~arN~G~~~A---~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~-~~v~~~ 76 (439)
+.+.++++++. ++++.. +...|.++. ..|++.. ..++++++++|.- +++..++.+++.+.+++. .++...
T Consensus 59 ~~i~~~~~~~g--~~v~~~~~~~~~Gt~~i-~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~ 135 (256)
T 3tqd_A 59 KRIRQVAEDFG--AVVCMTSSDHQSGTERI-AEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLC 135 (256)
T ss_dssp HHHHHHHHHTT--CEEEECCTTCCSHHHHH-HHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEE
T ss_pred HHHHHHHHHcC--CeEEEeCCCCCCcHHHH-HHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 45677777775 455432 344576553 3455544 5799999999995 689999999999986532 332222
Q ss_pred eecc------cCCCcccccccCCCCccccccccccccccCCCchH-HHhhccCCCCCccCccccceEEEEeHHHHHHhCC
Q psy8674 77 IDGI------DYQTWEFRSVYEPDHHYRGIFEWGMLYKENELPER-EAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGG 149 (439)
Q Consensus 77 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGg 149 (439)
.... +.+...... ..-+..+.|.....+.. ...............+...+..++|++++++.-.
T Consensus 136 ~~v~~~~~~~~p~~vkvv~---------d~~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 136 TPITEVDELFNPHSTKVVL---------NRRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp EECCCHHHHTCTTSCEEEE---------CTTSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred eEcCCHHHhhCCCccEEEE---------CCCCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHh
Confidence 1111 111100000 00011122222222100 0000000000001224467789999999999876
Q ss_pred CCCCCCCccchhhHH--HHHHHHhCCcEEEec
Q psy8674 150 YDPGLLVWGGENFEL--SFKIWMCGGSIEWVP 179 (439)
Q Consensus 150 fde~~~~~~~ED~Dl--~~Rl~~~G~~i~~~p 179 (439)
..+.- .|..|- .+|+...|++|....
T Consensus 207 l~~s~----lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 207 WDACP----AEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp SCCCH----HHHHHTCTTHHHHHTTCCCEEEE
T ss_pred CCCCc----ccchhhhHHHHHHHCCCeEEEEE
Confidence 55432 244432 268899999977654
No 51
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=91.35 E-value=1.2 Score=40.61 Aligned_cols=98 Identities=8% Similarity=0.110 Sum_probs=63.1
Q ss_pred EEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHH---cCCcEEEEEcCCCCCHHHHHHHHH
Q psy8674 274 ILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQR---FNGKVRLIRNTEREGLIRTRSRGA 350 (439)
Q Consensus 274 iip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~---~~~~v~~i~~~~~~g~~~a~n~g~ 350 (439)
.+|.++. ..|...|+.+..... .+|+||-.+...+ .++++... ++..+.++..+...|.+.+...|.
T Consensus 27 llpi~gk--pli~~~l~~l~~~gi----~~I~vv~~~~~~~----~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~ 96 (293)
T 1fxo_A 27 LLPVYDK--PMIYYPLSTLMLAGI----REILIISTPQDTP----RFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGE 96 (293)
T ss_dssp GSEETTE--ETTHHHHHHHHHTTC----CEEEEEECTTTHH----HHHHHHTTSGGGTCEEEEEECSSCCCGGGHHHHTH
T ss_pred eCeECCE--eHHHHHHHHHHHCCC----CEEEEEeccccHH----HHHHHHhcccccCceEEEeeCCCCCCHHHHHHHHH
Confidence 3455664 577888888876432 2788776443332 23333332 333466666666778888888888
Q ss_pred hhcCCCEEEEEcCCCccCCCChHHHHHhhhc
Q psy8674 351 KESRGEVIVFLDAHCEVGLNWLPPLLAPIYS 381 (439)
Q Consensus 351 ~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~ 381 (439)
.....+-++++.+|..+....+..+++.+..
T Consensus 97 ~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~ 127 (293)
T 1fxo_A 97 SFIGNDLSALVLGDNLYYGHDFHELLGSASQ 127 (293)
T ss_dssp HHHTTSEEEEEETTEEEECTTHHHHHHHHHT
T ss_pred HHhCCCCEEEEECChhccCccHHHHHHHHHh
Confidence 7766566666669988755678999987753
No 52
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=91.10 E-value=0.92 Score=39.41 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-----CCCCHHHHHHHHHhhcC--C
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-----EREGLIRTRSRGAKESR--G 355 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-----~~~g~~~a~n~g~~~a~--~ 355 (439)
..|..+++.+.+....+ +|+||-+. + .+.++.+.++ +.++..+ ...|...+...|++... .
T Consensus 30 pll~~~l~~~~~~~~~~---~ivvv~~~---~----~i~~~~~~~~--~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~ 97 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFD---RIIVSTDG---G----LIAEEAKNFG--VEVVLRPAELASDTASSISGVIHALETIGSNS 97 (228)
T ss_dssp EHHHHHHHHHHHHCCCS---EEEEEESC---H----HHHHHHHHTT--CEEEECCC------CHHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHhCCCCC---EEEEECCC---H----HHHHHHHHcC--CEEEeCchHHcCCCCChHHHHHHHHHHhCCCC
Confidence 57888888887654222 78887642 2 2233334443 4444443 23455667777777663 5
Q ss_pred CEEEEEcCCCc-cCCCChHHHHHhhhcCC
Q psy8674 356 EVIVFLDAHCE-VGLNWLPPLLAPIYSDR 383 (439)
Q Consensus 356 d~i~~ld~D~~-~~~~~l~~l~~~~~~~~ 383 (439)
++++++++|.. +++..+..+++.+...+
T Consensus 98 d~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 126 (228)
T 1ezi_A 98 GTVTLLQPTSPLRTGAHIREAFSLFDEKI 126 (228)
T ss_dssp EEEEECCTTCTTCCHHHHHHHHTTCCTTT
T ss_pred CEEEEEcCCCCcCCHHHHHHHHHHHHhcC
Confidence 89999999986 47888999998876554
No 53
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=90.91 E-value=2.9 Score=36.52 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC--CCCCHHHHHHHHHhhcCCCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT--EREGLIRTRSRGAKESRGEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~--~~~g~~~a~n~g~~~a~~d~i~~ 360 (439)
..|..+++.+......+ +|+||-+. + .+.++...+ .+.++..+ ...|.+.+. .+++....+.+++
T Consensus 28 pli~~~i~~~~~~~~~~---~ivvv~~~---~----~i~~~~~~~--~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv 94 (245)
T 1h7e_A 28 PMIQHVYERALQVAGVA---EVWVATDD---P----RVEQAVQAF--GGKAIMTRNDHESGTDRLV-EVMHKVEADIYIN 94 (245)
T ss_dssp EHHHHHHHHHHTCTTCC---EEEEEESC---H----HHHHHHHHT--TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEE
T ss_pred hHHHHHHHHHHhCCCCC---eEEEECCc---H----HHHHHHHHc--CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEE
Confidence 68888898887654212 77777642 2 233334443 35666543 234555444 4555556799999
Q ss_pred EcCCCcc-CCCChHHHHHhhhcC
Q psy8674 361 LDAHCEV-GLNWLPPLLAPIYSD 382 (439)
Q Consensus 361 ld~D~~~-~~~~l~~l~~~~~~~ 382 (439)
+++|..+ ++..+..+++.+...
T Consensus 95 ~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 95 LQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CCTTCTTCCHHHHHHHHHHHHHC
T ss_pred EcCCcCcCCHHHHHHHHHHHHhC
Confidence 9999974 788899999988665
No 54
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=90.87 E-value=1.2 Score=39.69 Aligned_cols=63 Identities=10% Similarity=0.107 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCCcEEEEE--ecCCCChhHHHHhhhhhc---cCcEEEEecCCcc-cCCCchHHHHHHHhcCC
Q psy8674 4 KKLEDYIERFNGKVRLIR--NTEREGLIRTRSRGAKES---RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~--~~~n~G~a~arN~G~~~A---~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~ 69 (439)
+.+.++++++. ++++. .+...|.. +.-.|++.. ..++++++++|.- +++..++.+++.+.+++
T Consensus 52 ~~i~~~~~~~g--~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~ 120 (253)
T 4fcu_A 52 ERIAEICRAEG--VDVVLTSADHPSGTD-RLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120 (253)
T ss_dssp HHHHHHHHTTT--CCEEECCTTCCCHHH-HHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcC--CeEEEeCCCCCChHH-HHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCC
Confidence 45667777765 44443 23344543 334455544 3589999999995 68999999999998764
No 55
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=90.41 E-value=2.1 Score=39.02 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=61.1
Q ss_pred EEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHH---cCCcEEEEEcCCCCCHHHHHHHHH
Q psy8674 274 ILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQR---FNGKVRLIRNTEREGLIRTRSRGA 350 (439)
Q Consensus 274 iip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~---~~~~v~~i~~~~~~g~~~a~n~g~ 350 (439)
.+|.++. ..|...|+.+..... .+|+||-.....+ .++++... ++..+.++..+...|.+.+.-.|+
T Consensus 28 llpi~gk--pli~~~l~~l~~~gi----~~Iivv~~~~~~~----~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~ 97 (295)
T 1lvw_A 28 LLPIYDK--PMIYYPLSVLMLAGI----RDILIISTPRDLP----LYRDLLGDGSQFGVRFSYRVQEEPRGIADAFIVGK 97 (295)
T ss_dssp GSEETTE--ETTHHHHHHHHHTTC----CEEEEEECTTTHH----HHHHHHTTSGGGTSEEEEEECSSCCCGGGHHHHTH
T ss_pred ecEECCe--eHHHHHHHHHHHCCC----CeEEEEeccchHH----HHHHHhhhccccCceEEEeeCCCCCChHHHHHHHH
Confidence 3456664 578888888876431 2788775433322 33343332 333466666666678888888888
Q ss_pred hhcC-CCEEEEEcCCCccCCCChHHHHHhhhc
Q psy8674 351 KESR-GEVIVFLDAHCEVGLNWLPPLLAPIYS 381 (439)
Q Consensus 351 ~~a~-~d~i~~ld~D~~~~~~~l~~l~~~~~~ 381 (439)
.... .++++++ +|..+....+..+++....
T Consensus 98 ~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (295)
T 1lvw_A 98 DFIGDSKVALVL-GDNVFYGHRFSEILRRAAS 128 (295)
T ss_dssp HHHTTSCEEEEE-TTCCEECTTHHHHHHHHHT
T ss_pred HHhCCCcEEEEE-CCccccCcCHHHHHHHHHH
Confidence 7665 4555555 8988755778888887754
No 56
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=90.32 E-value=5 Score=35.71 Aligned_cols=67 Identities=6% Similarity=0.089 Sum_probs=48.5
Q ss_pred HHHHHHHh---cCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCCCeE
Q psy8674 5 KLEDYIER---FNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIM 72 (439)
Q Consensus 5 ~l~~~~~~---~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~ 72 (439)
.+.+++.. +...+.++..++..|.+.+.-.++.....+.++++++|..+. .-+..+++.+.+....+
T Consensus 84 ~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~ 153 (269)
T 4ecm_A 84 DVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTNQKEGA 153 (269)
T ss_dssp HHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHTSSSSE
T ss_pred HHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHhcCCCe
Confidence 44555543 323566776667789999988888877778999999999876 66788888887654443
No 57
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=89.99 E-value=1.1 Score=40.12 Aligned_cols=158 Identities=10% Similarity=0.125 Sum_probs=81.2
Q ss_pred HHHHHHHHhcCCcEEEEE--ecCCCChhHHHHhhhhhc---cCcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEeeeee
Q psy8674 4 KKLEDYIERFNGKVRLIR--NTEREGLIRTRSRGAKES---RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPVI 77 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~--~~~n~G~a~arN~G~~~A---~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~ 77 (439)
+.+.++++++. ++++. .+...|.++ ...+++.. ..++++++++|.- +++..++.+++.+.+....++....
T Consensus 68 ~~i~~~~~~~g--~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~ 144 (264)
T 3k8d_A 68 EDVARAVEAAG--GEVCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAV 144 (264)
T ss_dssp HHHHHHHHHTT--CEEEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred HHHHHHHHHcC--CEEEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEE
Confidence 45667777765 55553 234556544 23333332 5799999999995 5899999999999865443332222
Q ss_pred eccc------CCCcccccccCCCCccccccccccccccCCCc-hHHHhhccCCCCCccCccccceEEEEeHHHHHHhCCC
Q psy8674 78 DGID------YQTWEFRSVYEPDHHYRGIFEWGMLYKENELP-EREAKKRKYNSEPYKSPTHAGGLFAMDRAFFLELGGY 150 (439)
Q Consensus 78 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~iGgf 150 (439)
..-+ .+...... ..-+..+.|.....+ .+..... .....-.......+..+++++++++.-..
T Consensus 145 ~v~d~~~~~~p~~vkVv~---------d~~g~~l~fsr~~ip~~r~~~~~-~~~~~~~~~~~~~GiY~y~~~~l~~~~~~ 214 (264)
T 3k8d_A 145 PIHNAEEAFNPNAVKVVL---------DAEGYALYFSRATIPWDRDRFAE-GLETVGDNFLRHLGIYGYRAGFIRRYVNW 214 (264)
T ss_dssp ECCSHHHHTCTTSCEEEE---------CTTSBEEEEESSCCSCCHHHHHH-CSSCCCSCCEEECSEEEEEHHHHHHHHHS
T ss_pred EcCCHHHccCCCceEEEE---------CCCCeEEEEecCCCCCCCccccc-cccccCCcceEEEEEEEECHHHHHHHHhC
Confidence 2111 11111000 000111222222221 0110000 00000012244567899999999987655
Q ss_pred CCCCCCccchhhHH--HHHHHHhCCcEEEe
Q psy8674 151 DPGLLVWGGENFEL--SFKIWMCGGSIEWV 178 (439)
Q Consensus 151 de~~~~~~~ED~Dl--~~Rl~~~G~~i~~~ 178 (439)
++.- .|-.|- .+|+.+.|++|...
T Consensus 215 ~~~~----lE~~e~leqlr~le~G~~I~~~ 240 (264)
T 3k8d_A 215 QPSP----LEHIEMLEQLRVLWYGEKIHVA 240 (264)
T ss_dssp CCCH----HHHHHTCTTHHHHHTTCCEEEE
T ss_pred CCCh----hhhHHHHHHHHHHHCCCceEEE
Confidence 5432 133221 26888999998765
No 58
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=89.83 E-value=2.3 Score=41.98 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=73.5
Q ss_pred EEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc
Q psy8674 274 ILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES 353 (439)
Q Consensus 274 iip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a 353 (439)
.+|..|.+ .|.-.|+.+.+.... +|+||-.. ..+.+++.+.++...++..+.++..++..|.+.|...+....
T Consensus 34 l~pv~gkp--~i~~~l~~~~~~g~~----~i~vv~~~-~~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l 106 (501)
T 3st8_A 34 LHTLAGRS--MLSHVLHAIAKLAPQ----RLIVVLGH-DHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSAL 106 (501)
T ss_dssp GCEETTEE--HHHHHHHHHHHHCCS----EEEEEECT-THHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTS
T ss_pred HeEECChh--HHHHHHHHHHhCCCC----EEEEEeCC-CHHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHh
Confidence 56777764 888888888776532 77777643 333344455555555566788888888899999999998876
Q ss_pred CC---CEEEEEcCCCc-cCCCChHHHHHhhhcCCCE
Q psy8674 354 RG---EVIVFLDAHCE-VGLNWLPPLLAPIYSDRKI 385 (439)
Q Consensus 354 ~~---d~i~~ld~D~~-~~~~~l~~l~~~~~~~~~~ 385 (439)
.. +.++++.+|+. +..+.+..|++........
T Consensus 107 ~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~ 142 (501)
T 3st8_A 107 PDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAA 142 (501)
T ss_dssp CTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCS
T ss_pred ccccccceeeecCcceeecHHHHHHHHHHHhhcccc
Confidence 53 45677777765 5677888998887665553
No 59
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=89.49 E-value=0.39 Score=40.62 Aligned_cols=96 Identities=11% Similarity=-0.013 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-CCCCHHHHHHHHHhhc--CCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-EREGLIRTRSRGAKES--RGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~g~~~a~n~g~~~a--~~d~i~ 359 (439)
..|..+++.+..... . +|+||-+.. .+ .+.++.... .+.++..+ ...|...+...|++.. ..++++
T Consensus 32 pll~~~l~~l~~~~~--~--~i~vv~~~~-~~----~~~~~~~~~--~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vl 100 (197)
T 2wee_A 32 TVLGATLDVARQAGF--D--QLILTLGGA-AS----AVRAAMALD--GTDVVVVEDVERGCAASLRVALARVHPRATGIV 100 (197)
T ss_dssp EHHHHHHHHHHHTTC--S--EEEEEECTT-HH----HHHHHSCCT--TSEEEECC----CCHHHHHHHHTTSCTTEEEEE
T ss_pred cHHHHHHHHHHhcCC--C--cEEEEeCCC-HH----HHHHHhccC--CCEEEECCCcccCHHHHHHHHHHHhcccCCeEE
Confidence 688888888876431 1 777775432 21 233332222 35565543 3357888888898877 468999
Q ss_pred EEcCCCc-cCCCChHHHHHhhhcCCCEEEEeee
Q psy8674 360 FLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPVI 391 (439)
Q Consensus 360 ~ld~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~ 391 (439)
++++|.. +++..+..+++. .. ...+++|..
T Consensus 101 v~~~D~P~~~~~~i~~l~~~-~~-~~~i~~~~~ 131 (197)
T 2wee_A 101 LMLGDQPQVAPATLRRIIDV-GP-ATEIMVCRY 131 (197)
T ss_dssp EEETTCTTCCHHHHHHHHHH-GG-GSSEEEEEE
T ss_pred EEeCCcCCCCHHHHHHHHhh-cC-CCCEEEEec
Confidence 9999995 578889999987 43 334455543
No 60
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=88.91 E-value=1.5 Score=37.27 Aligned_cols=89 Identities=7% Similarity=0.098 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-CC-CCHHHHHHHHHhhcCCCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-ER-EGLIRTRSRGAKESRGEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-~~-~g~~~a~n~g~~~a~~d~i~~ 360 (439)
..|..+++.+.... . +|+||-+... + .+. .. .+.++..+ .. .|...+...|++....+++++
T Consensus 34 pli~~~l~~l~~~~---~--~ivvv~~~~~----~-~~~----~~--~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv 97 (201)
T 1e5k_A 34 PLWQHVADALMTQL---S--HVVVNANRHQ----E-IYQ----AS--GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLF 97 (201)
T ss_dssp EHHHHHHHHHHHHC---S--CEEEECSSSH----H-HHH----TT--SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEE
T ss_pred eHHHHHHHHHHhhC---C--EEEEEcCCcH----H-HHh----hc--CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEE
Confidence 67888888877431 2 7777754321 1 111 22 35566543 23 688999999999988999999
Q ss_pred EcCCCc-cCCCChHHHHHhhhcCCCEEEEe
Q psy8674 361 LDAHCE-VGLNWLPPLLAPIYSDRKIMTVP 389 (439)
Q Consensus 361 ld~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 389 (439)
+++|.- ++++.+..+++. . .+..+++|
T Consensus 98 ~~~D~P~i~~~~i~~l~~~-~-~~~~~~~~ 125 (201)
T 1e5k_A 98 CPCDTPYIPPDLAARLNHQ-R-KDAPVVWV 125 (201)
T ss_dssp EETTCTTCCTTHHHHHHHT-C-TTCSEEEE
T ss_pred EeCCcCcCCHHHHHHHHhh-c-CCCCEEEE
Confidence 999994 688889999987 3 33344444
No 61
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=88.61 E-value=0.9 Score=40.97 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHH-------------------HHHH-cCCcEEEEEcCCCCCH
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLED-------------------YIQR-FNGKVRLIRNTEREGL 342 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~-------------------~~~~-~~~~v~~i~~~~~~g~ 342 (439)
..|..+|+.+.+... .+|+||-.. ..+.+.+.+.. +... .+..+.++..+...|.
T Consensus 34 pli~~~l~~l~~~gi----~~i~vv~~~-~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt 108 (281)
T 3juk_A 34 PLIQYAVEEAMEAGC----EVMAIVTGR-NKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQKQMKGL 108 (281)
T ss_dssp BHHHHHHHHHHHHTC----CEEEEEECT-THHHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEEECSSCCCH
T ss_pred EHHHHHHHHHHhCCC----CEEEEEecC-CHHHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEEecCCCCCc
Confidence 588888888877542 177777542 22222211110 0000 1235666766777899
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCCccCCC----ChHHHHHhhhcCCC
Q psy8674 343 IRTRSRGAKESRGEVIVFLDAHCEVGLN----WLPPLLAPIYSDRK 384 (439)
Q Consensus 343 ~~a~n~g~~~a~~d~i~~ld~D~~~~~~----~l~~l~~~~~~~~~ 384 (439)
+.+...|+.....+.++++.+|..+.++ .+..+++.+.....
T Consensus 109 ~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 109 GHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp HHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 9999999888777889999999977777 79999988765443
No 62
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=88.55 E-value=2.2 Score=38.81 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=59.6
Q ss_pred EEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHH---cCCcEEEEEcCCCCCHHHHHHHHHh
Q psy8674 275 LVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQR---FNGKVRLIRNTEREGLIRTRSRGAK 351 (439)
Q Consensus 275 ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~---~~~~v~~i~~~~~~g~~~a~n~g~~ 351 (439)
+|.++. ..|...|+.+..... .+|+||-.....+ .++++... ++..+.++..+...|.+.+.-.|+.
T Consensus 29 lpi~gk--pli~~~l~~l~~~gi----~~I~vv~~~~~~~----~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~ 98 (296)
T 1mc3_A 29 LPIYDK--PMIYYPLSVLMLAGI----REILIITTPEDKG----YFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGET 98 (296)
T ss_dssp SEETTE--ETTHHHHHHHHHTTC----CEEEEEECTTTHH----HHHHHHTTSGGGTCEEEEEECSSCCCSTHHHHHTHH
T ss_pred eEECCe--eHHHHHHHHHHhCCC----CcEEEEechhHHH----HHHHHHhcccccCceEEEeccCCCCCHHHHHHHHHH
Confidence 455664 577888888775431 2788875433322 33344332 2334666666666788888888887
Q ss_pred hcCC-CEEEEEcCCCccCCCChHHHHHhhhc
Q psy8674 352 ESRG-EVIVFLDAHCEVGLNWLPPLLAPIYS 381 (439)
Q Consensus 352 ~a~~-d~i~~ld~D~~~~~~~l~~l~~~~~~ 381 (439)
.... ++++++ +|..+....+..+++....
T Consensus 99 ~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (296)
T 1mc3_A 99 FLNGEPSCLVL-GDNIFFGQGFSPKLRHVAA 128 (296)
T ss_dssp HHTTSCEEEEE-TTEEEECSSCHHHHHHHTT
T ss_pred HhCCCCEEEEE-CCccccccCHHHHHHHHHH
Confidence 6654 455555 8987755678888887754
No 63
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=87.80 E-value=2.1 Score=38.93 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHH------HHHH-------------cCCcEEEEEcCCCCCHH
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLED------YIQR-------------FNGKVRLIRNTEREGLI 343 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~------~~~~-------------~~~~v~~i~~~~~~g~~ 343 (439)
..|..+|+.+.+... .+|+||-+...+ .+.+.+.. .... .+..+.++..+...|.+
T Consensus 46 pli~~~l~~l~~~g~----~~i~vv~~~~~~-~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~ 120 (297)
T 2ux8_A 46 PLIQYAVDEAVEAGI----EQMIFVTGRGKS-ALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQEPMGLG 120 (297)
T ss_dssp EHHHHHHHHHHHTTC----CEEEEEECTTCH-HHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECCSCCCHH
T ss_pred EHHHHHHHHHHhCCC----CEEEEEeCCCHH-HHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCCCCCChH
Confidence 688888888876532 277777654322 22212111 0000 11247777767778999
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCccC--CCChHHHHHhhhcCCC
Q psy8674 344 RTRSRGAKESRGEVIVFLDAHCEVG--LNWLPPLLAPIYSDRK 384 (439)
Q Consensus 344 ~a~n~g~~~a~~d~i~~ld~D~~~~--~~~l~~l~~~~~~~~~ 384 (439)
.+...|+.....+.++++.+|..+. +..+..+++...+...
T Consensus 121 ~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 121 HAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp HHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 9999888877678899999999987 6889999988765443
No 64
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=87.09 E-value=0.7 Score=39.02 Aligned_cols=96 Identities=10% Similarity=-0.020 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-CCCCHHHHHHHHHhhc--CCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-EREGLIRTRSRGAKES--RGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~g~~~a~n~g~~~a--~~d~i~ 359 (439)
..|..+++.+.... . . +|+||-+... + .+.++...+ .+.++..+ ...|...+...|++.. ..++++
T Consensus 32 pli~~~l~~l~~~~-~-~--~i~vv~~~~~-~----~~~~~~~~~--~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vl 100 (199)
T 2waw_A 32 TLLGATLAMARRCP-F-D--QLIVTLGGAA-D----EVLEKVELD--GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIV 100 (199)
T ss_dssp EHHHHHHHHHHTSS-C-S--EEEEEECTTH-H----HHHHHSCCT--TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEE
T ss_pred CHHHHHHHHHHhCC-C-C--cEEEEeCCCH-H----HHHHHhccC--CCEEEECCCcccCHHHHHHHHHHhhhccCCeEE
Confidence 68888888887643 1 2 7777765322 1 233333222 34555433 3356677888888877 579999
Q ss_pred EEcCCCcc-CCCChHHHHHhhhcCCCEEEEeee
Q psy8674 360 FLDAHCEV-GLNWLPPLLAPIYSDRKIMTVPVI 391 (439)
Q Consensus 360 ~ld~D~~~-~~~~l~~l~~~~~~~~~~~v~~~~ 391 (439)
++++|..+ ++..+..+++. .. +..+++|..
T Consensus 101 v~~~D~P~~~~~~i~~l~~~-~~-~~~~~~~~~ 131 (199)
T 2waw_A 101 LMLGDQPGITASAVASLIAG-GR-GATIAVCEY 131 (199)
T ss_dssp EEETTCTTCCHHHHHHHHHH-HT-TCSEEEEEE
T ss_pred EEeCCcccCCHHHHHHHHhh-cC-CCCEEEEec
Confidence 99999985 78889999887 43 334555543
No 65
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=86.96 E-value=1.6 Score=38.54 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHc--CCcEEEEEcCCCCCHHHHHHHHHhhcC------
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRF--NGKVRLIRNTEREGLIRTRSRGAKESR------ 354 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~~~v~~i~~~~~~g~~~a~n~g~~~a~------ 354 (439)
..|..+|+.+.+....+ +|+||-+..... .+++..+.+ +..+.++.. ..+...+.-.|++...
T Consensus 33 pll~~~l~~~~~~~~~~---~ivvv~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~l~~~~~~~ 103 (246)
T 3f1c_A 33 PIIVHTVEKFILNTRFD---KILISSPKEWMN----HAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRFVEKTYGLT 103 (246)
T ss_dssp EHHHHHHHHHHTCTTCS---EEEEEECGGGHH----HHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHHHHHHTCCC
T ss_pred eHHHHHHHHHHcCCCCC---EEEEEeCHHHHH----HHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHHHhhhhcCC
Confidence 68888999887653222 777776543211 233333332 224666643 2345666666776543
Q ss_pred -CCEEEEEcCCCc-cCCCChHHHHHhhhcCCC-EEEEeeee
Q psy8674 355 -GEVIVFLDAHCE-VGLNWLPPLLAPIYSDRK-IMTVPVID 392 (439)
Q Consensus 355 -~d~i~~ld~D~~-~~~~~l~~l~~~~~~~~~-~~v~~~~~ 392 (439)
.++++++|+|.- +++..+..+++.+...+. ..+.|..+
T Consensus 104 ~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~~~~d 144 (246)
T 3f1c_A 104 DDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVIEALD 144 (246)
T ss_dssp TTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEEECSS
T ss_pred CCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 589999999985 578999999998877654 33445443
No 66
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=86.74 E-value=4.6 Score=39.04 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhccC-cEEEEecCCc-ccCCCchHHHHHHHhc
Q psy8674 4 KKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESRG-EVIVFLDAHC-EVGLNWLPPLLAPIYS 67 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~g-~~i~flD~D~-~~~~~~l~~l~~~~~~ 67 (439)
+.++++++.. .++++..++..|.+.+.-.|++.... +.++++++|. .+++..++.+++.+.+
T Consensus 63 ~~i~~~~~~~--~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 63 ELLKKTLADP--SLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp HHHHHHC-------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred HHHHHHhccC--CcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 4455555544 47788777788998898899888764 8999999999 4688899999988765
No 67
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=86.41 E-value=1 Score=38.74 Aligned_cols=94 Identities=11% Similarity=0.046 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-CCCCHHHHHHHHHhhcCCCE
Q psy8674 279 NEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-EREGLIRTRSRGAKESRGEV 357 (439)
Q Consensus 279 n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~g~~~a~n~g~~~a~~d~ 357 (439)
+.. ..|..+++.+... +|+||-+. ++ .++.+...+ .+.++... ...|...+...|++.+ .++
T Consensus 24 ~G~-pli~~~~~~l~~~-------~vvvv~~~--~~----~~~~~~~~~--~~~~v~d~~~~~G~~~si~~gl~~~-~~~ 86 (208)
T 3ngw_A 24 CGK-KLIEWVLEKYSPF-------QTVFVCRD--EK----QAEKLSSRY--EAEFIWDLHKGVGSIAGIHAALRHF-GSC 86 (208)
T ss_dssp TTE-EHHHHHHHHHTTS-------EEEEECSS--HH----HHHHHHTTS--CSCEECCTTCCCSHHHHHHHHHHHH-SSE
T ss_pred CCe-eHHHHHHHHhcCC-------CEEEEECC--HH----HHHHHHHhc--CCeEEecCCCCCChHHHHHHHHHHc-CCC
Confidence 445 6888888887653 67777532 22 333443333 35555432 3457778999999988 899
Q ss_pred EEEEcCCCcc-CCCChHHHHHhhhcCCCEEEEee
Q psy8674 358 IVFLDAHCEV-GLNWLPPLLAPIYSDRKIMTVPV 390 (439)
Q Consensus 358 i~~ld~D~~~-~~~~l~~l~~~~~~~~~~~v~~~ 390 (439)
+ ++.+|.-+ +++.+..+++.+...+..+++|.
T Consensus 87 v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 87 V-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp E-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred E-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 9 99999964 89999999998875444555565
No 68
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=86.37 E-value=1.1 Score=38.10 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC-CCCHHHHHHHHHhhcCC-CEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE-REGLIRTRSRGAKESRG-EVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~-~~g~~~a~n~g~~~a~~-d~i~~ 360 (439)
..|..+++.+... +|+||-+.. . + .+.++.. ..+ ++..+. ..|...+...|++.... +++++
T Consensus 29 pll~~~l~~l~~~-------~ivvv~~~~-~---~-~~~~~~~---~~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv 92 (197)
T 3d5n_A 29 PIIMRTIRIYGDL-------EKIIIVGKY-V---N-EMLPLLM---DQI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLV 92 (197)
T ss_dssp BHHHHHHHHTTTS-------BCCEEECTT-H---H-HHGGGCT---TSC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEE
T ss_pred EHHHHHHHHHHhC-------CEEEEECCC-H---H-HHHHHhc---CCE-EEECCCCCCCHHHHHHHHHHhhccCCcEEE
Confidence 6788888877643 445554332 1 1 2222222 135 554433 35888888889988765 89999
Q ss_pred EcCCCc-cCCCChHHHHHhhhcCCCEEEEeeee
Q psy8674 361 LDAHCE-VGLNWLPPLLAPIYSDRKIMTVPVID 392 (439)
Q Consensus 361 ld~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~ 392 (439)
+++|.- ++++.+..+++.+ .....+++|..+
T Consensus 93 ~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~~ 124 (197)
T 3d5n_A 93 ALGDMPFVTKEDVNKIINTF-KPNCKAVIPTHK 124 (197)
T ss_dssp EETTCCCSCHHHHHHHHHTC-CTTCSEEEEEET
T ss_pred EeCCccccCHHHHHHHHHHh-cCCCcEEEEEeC
Confidence 999995 5788899999887 445556666543
No 69
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=86.08 E-value=2.7 Score=36.39 Aligned_cols=86 Identities=10% Similarity=0.146 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC--CCCCHHHHHHHHHhhcCCCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT--EREGLIRTRSRGAKESRGEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~--~~~g~~~a~n~g~~~a~~d~i~~ 360 (439)
..|..+|+.+.+. . + +|+|+-+. + .+.++...+ +.++..+ ...|.+.+. .+++....+++++
T Consensus 28 pli~~~l~~~~~~-~-~---~i~v~~~~---~----~i~~~~~~~---~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv 91 (234)
T 2y6p_A 28 PLIRWVVEGLVKT-G-E---RVILATDS---E----RVKEVVEDL---CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIIN 91 (234)
T ss_dssp EHHHHHHHHHHTT-T-S---CEEEEESC---H----HHHHHHTTT---SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEE
T ss_pred EHHHHHHHHHHHh-C-C---EEEEECCh---H----HHHHHHHhc---eEEEECCcccccchHHHH-HHHHhCCCCEEEE
Confidence 6888889888765 2 2 67776543 2 223333332 3334332 245666655 4667667899999
Q ss_pred EcCCC-ccCCCChHHHHHhhhcCCC
Q psy8674 361 LDAHC-EVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 361 ld~D~-~~~~~~l~~l~~~~~~~~~ 384 (439)
+++|. .+++..+..+++.+...+.
T Consensus 92 ~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 92 YQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred ecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 99999 5677899999998865544
No 70
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=86.02 E-value=3.2 Score=36.76 Aligned_cols=88 Identities=11% Similarity=0.136 Sum_probs=54.8
Q ss_pred hHHHHHH-HHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc---CCCEE
Q psy8674 283 SSLMRTV-HSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES---RGEVI 358 (439)
Q Consensus 283 ~~l~~~l-~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a---~~d~i 358 (439)
..|..++ +.+.+.. . .+|+|+-+. + .+.++...++..+.+.......|. .+...|++.. ..+++
T Consensus 27 Pli~~~i~~~~~~~~-~---~~vvVvt~~---~----~i~~~~~~~g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~v 94 (253)
T 4fcu_A 27 PMILRVVDQAKKVEG-F---DDLCVATDD---E----RIAEICRAEGVDVVLTSADHPSGT-DRLSEVARIKGWDADDII 94 (253)
T ss_dssp EHHHHHHHHHHTCTT-C---CEEEEEESC---H----HHHHHHHTTTCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEE
T ss_pred EhHHHHHHHHHHhcC-C---CEEEEECCH---H----HHHHHHHHcCCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEE
Confidence 5888888 8876532 1 278877642 2 333444444433322222233443 3445555554 46899
Q ss_pred EEEcCCCc-cCCCChHHHHHhhhcC
Q psy8674 359 VFLDAHCE-VGLNWLPPLLAPIYSD 382 (439)
Q Consensus 359 ~~ld~D~~-~~~~~l~~l~~~~~~~ 382 (439)
+++++|.- +++..|..+++.+.+.
T Consensus 95 lv~~gD~Pli~~~~i~~li~~~~~~ 119 (253)
T 4fcu_A 95 VNVQGDEPLLPAQLVQQVAKLLVDK 119 (253)
T ss_dssp EECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred EEEeCCcccCCHHHHHHHHHHHHhC
Confidence 99999995 5789999999998765
No 71
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=85.77 E-value=3.7 Score=35.79 Aligned_cols=103 Identities=10% Similarity=0.164 Sum_probs=64.4
Q ss_pred CCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC----
Q psy8674 279 NEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR---- 354 (439)
Q Consensus 279 n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~---- 354 (439)
+.. ..|..+++.+.+....+ +|+||-+... .+ .++++... .+.++... .+...+.-.|++...
T Consensus 33 ~Gk-pll~~~l~~~~~~~~~~---~ivVv~~~~~---~~-~~~~~~~~---~v~~v~gg--~~r~~sv~~gl~~~~~~~~ 99 (231)
T 3q80_A 33 DGQ-TLIERAVDGLLDSGVVD---TVVVAVPADR---TD-EARQILGH---RAMIVAGG--SNRTDTVNLALTVLSGTAE 99 (231)
T ss_dssp TTE-EHHHHHHHHHHHTSCCC---EEEEEECGGG---HH-HHHHHHGG---GCEEEECC--SSHHHHHHHHHGGGC---C
T ss_pred CCe-EHHHHHHHHHHhCCCCC---eEEEECChHH---HH-HHHHHhcC---CeEEEcCC--CchHHHHHHHHHHhhhcCC
Confidence 344 68889999887643222 7877765432 12 33333322 45666432 234566777887765
Q ss_pred CCEEEEEcCCCcc-CCCChHHHHHhhhcC-CC-EEEEeeeeee
Q psy8674 355 GEVIVFLDAHCEV-GLNWLPPLLAPIYSD-RK-IMTVPVIDGI 394 (439)
Q Consensus 355 ~d~i~~ld~D~~~-~~~~l~~l~~~~~~~-~~-~~v~~~~~~~ 394 (439)
.++++++|+|.-+ +++.|..+++.+..+ +. ..++|.-+.+
T Consensus 100 ~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~~~p~~dt~ 142 (231)
T 3q80_A 100 PEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTI 142 (231)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEEEECCSSCE
T ss_pred CCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEEEEeccCCE
Confidence 4899999999875 799999999998773 33 2334554443
No 72
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=85.67 E-value=3.6 Score=37.35 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHH---HHH---------------H---cCCcEEEEEcCCCCC
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLED---YIQ---------------R---FNGKVRLIRNTEREG 341 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~---~~~---------------~---~~~~v~~i~~~~~~g 341 (439)
..|..+|+.+..... .+|+||-+... ..+.+.+.. +.. . .+..+.++..+...|
T Consensus 40 pli~~~l~~l~~~gi----~~i~vv~~~~~-~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~G 114 (302)
T 2e3d_A 40 PLIQYVVNECIAAGI----TEIVLVTHSSK-NSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKG 114 (302)
T ss_dssp EHHHHHHHHHHHTTC----CEEEEEECGGG-HHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEECSSCCC
T ss_pred EHHHHHHHHHHHCCC----CEEEEEeCCCH-HHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeCCccCC
Confidence 688888988876532 17777754322 222212211 000 0 122466666677789
Q ss_pred HHHHHHHHHhhcCCCEEEEEcCCCccC----CC---ChHHHHHhhhcCCC
Q psy8674 342 LIRTRSRGAKESRGEVIVFLDAHCEVG----LN---WLPPLLAPIYSDRK 384 (439)
Q Consensus 342 ~~~a~n~g~~~a~~d~i~~ld~D~~~~----~~---~l~~l~~~~~~~~~ 384 (439)
.+.+...++.....+.++++.+|..+. +. .+..+++.......
T Consensus 115 t~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 115 LGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp HHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 999999888877667899999999986 45 79999987765443
No 73
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=85.46 E-value=6.4 Score=33.83 Aligned_cols=93 Identities=12% Similarity=0.018 Sum_probs=59.9
Q ss_pred CChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc------
Q psy8674 280 EGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES------ 353 (439)
Q Consensus 280 ~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a------ 353 (439)
.. ..|..+++.+......+ +|+||-+... .... ++.......+.++ ....|.+.+.-.|+...
T Consensus 33 gk-pli~~~l~~l~~~~~~~---~ivvv~~~~~-~~~~----~~~~~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~ 101 (231)
T 1vgw_A 33 SK-TVLEHVLGIFERHEAVD---LTVVVVSPED-TFAD----KVQTAFPQVRVWK--NGGQTRAETVRNGVAKLLETGLA 101 (231)
T ss_dssp TE-EHHHHHHHHHHTCTTCC---EEEEECCTTC-STHH----HHHHHCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSS
T ss_pred Ce-EHHHHHHHHHHcCCCCC---eEEEEECccH-HHHH----HHHhcCCCceEEE--cCCCcHHHHHHHHHHHHhhhccC
Confidence 44 68888999887643222 7777754332 2233 2222111246554 34567778888787765
Q ss_pred -CCCEEEEEcCCCc-cCCCChHHHHHhhhcCC
Q psy8674 354 -RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 383 (439)
Q Consensus 354 -~~d~i~~ld~D~~-~~~~~l~~l~~~~~~~~ 383 (439)
..+.++++++|.. ++++.+..+++.+....
T Consensus 102 ~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 102 AETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp CTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred CCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 4689999999986 47888999999886654
No 74
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=85.18 E-value=2.1 Score=41.58 Aligned_cols=90 Identities=17% Similarity=0.164 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC-CCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~-~d~i~~l 361 (439)
..|..+|+.+.+... . +|+||-+.. ++ .++++.... .+.++..+...|.+.+...|++... .++++++
T Consensus 37 pli~~~l~~l~~~~~-~---~i~vv~~~~-~~----~i~~~~~~~--~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~ 105 (459)
T 4fce_A 37 PMVQHVIDAAMKLGA-Q---HVHLVYGHG-GE----LLKKTLADP--SLNWVLQAEQLGTGHAMQQAAPHFADDEDILML 105 (459)
T ss_dssp EHHHHHHHHHHHHTC-S---CEEEEESSC-HH----HHHHHC-------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEE
T ss_pred eHHHHHHHHHHhCCC-C---cEEEEeCCC-HH----HHHHHhccC--CcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEE
Confidence 688888998887642 1 677775433 22 333333332 4667767777888999999998876 4899999
Q ss_pred cCCCc-cCCCChHHHHHhhhcCC
Q psy8674 362 DAHCE-VGLNWLPPLLAPIYSDR 383 (439)
Q Consensus 362 d~D~~-~~~~~l~~l~~~~~~~~ 383 (439)
++|.- +++..+..+++.+.+..
T Consensus 106 ~~D~P~i~~~~i~~l~~~~~~~~ 128 (459)
T 4fce_A 106 YGDVPLISVDTLQRLLAAKPEGG 128 (459)
T ss_dssp ETTCTTCCHHHHHHHHHHCCTTS
T ss_pred eCCcccCCHHHHHHHHHHHhhCC
Confidence 99984 67888999998886643
No 75
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=84.92 E-value=4.7 Score=36.87 Aligned_cols=113 Identities=14% Similarity=0.151 Sum_probs=65.4
Q ss_pred EEEEecCCChhHHHHHHHHH-HhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCC--------CC--
Q psy8674 273 VILVFHNEGFSSLMRTVHSI-IKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTER--------EG-- 341 (439)
Q Consensus 273 iiip~~n~~~~~l~~~l~sl-~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~--------~g-- 341 (439)
|++.+-+.-...+..++.|| +..+..++ .++|+.++-+++..+ .++++...++..+.++..+.. .+
T Consensus 3 I~~~~d~~Y~~~~~vli~Sl~l~~~~~~~--~f~il~~~ls~~~~~-~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (311)
T 1g9r_A 3 IVFAADDNYAAYLCVAAKSVEAAHPDTEI--RFHVLDAGISEANRA-AVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHI 79 (311)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHTCTTSCC--EEEEEESSCCHHHHH-HHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTC
T ss_pred EEEECCHhHHHHHHHHHHHHHHHcCCCCc--eEEEEECCCCHHHHH-HHHHHHHHcCCEEEEEEcCHHHHhcCccccccC
Confidence 44444332236778889999 76654444 888888887766655 777766555556777653211 11
Q ss_pred --HHHHHHHHHhh-cCCCEEEEEcCCCccCCCChHHHHHhhhcCCCEEEEe
Q psy8674 342 --LIRTRSRGAKE-SRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIMTVP 389 (439)
Q Consensus 342 --~~~a~n~g~~~-a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~~ 389 (439)
.+..+-..... ..-+-+++||+|..+..+ |.+|.+.=..+...++++
T Consensus 80 s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~d-i~eL~~~~l~~~~~aav~ 129 (311)
T 1g9r_A 80 SITTYARLKLGEYIADCDKVLYLDIDVLVRDS-LTPLWDTDLGDNWLGASI 129 (311)
T ss_dssp CGGGGGGGGHHHHCCSCSCEEEECSSEEECSC-CHHHHTCCCTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhhhcCEEEEEcCCeEeccC-HHHHhccCCCCcEEEEEe
Confidence 11112222222 246889999999998655 666665422233444444
No 76
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=84.90 E-value=5.9 Score=36.11 Aligned_cols=89 Identities=9% Similarity=0.031 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHH-cCC-cEEEEEcCCCCCHHHHHHHHHhhcC-CC
Q psy8674 280 EGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQR-FNG-KVRLIRNTEREGLIRTRSRGAKESR-GE 356 (439)
Q Consensus 280 ~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~-~v~~i~~~~~~g~~~a~n~g~~~a~-~d 356 (439)
.. ..|..+|+.+.+. . . +|+||-+... .+ .+.+.... ++. .+.++..+...|.+.+.-.+..... .+
T Consensus 36 g~-pli~~~l~~l~~~-~-~---~i~vv~~~~~---~~-~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~a~~~l~~~~ 105 (308)
T 2qh5_A 36 HK-SLFELSFKRNASL-V-D---ETLIVCNEKH---YF-LALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKED 105 (308)
T ss_dssp TB-CHHHHHHHHHHTT-C-S---EEEEEEEGGG---HH-HHHHHTTTTCSSCEEEEEEESSCCCHHHHHHHHHHTSCTTS
T ss_pred CC-CHHHHHHHHHHcc-C-C---CEEEEEChhH---HH-HHHHHHHHhhCCCccEEEeCCCCCChHHHHHHHHHHhCCCC
Confidence 44 6888888888765 2 2 6766654321 11 33333333 332 4566666777899999888887765 45
Q ss_pred EEEEEcCCCcc-CCCChHHHHHh
Q psy8674 357 VIVFLDAHCEV-GLNWLPPLLAP 378 (439)
Q Consensus 357 ~i~~ld~D~~~-~~~~l~~l~~~ 378 (439)
+++++.+|..+ +++.+..+++.
T Consensus 106 ~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 106 LLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp EEEEEESSCBCCCHHHHHHHHHH
T ss_pred eEEEEcCCccccCHHHHHHHHHH
Confidence 89999999987 56668888875
No 77
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=84.87 E-value=2.1 Score=40.41 Aligned_cols=87 Identities=9% Similarity=0.146 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEc
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLD 362 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld 362 (439)
..|..+++.+.+....+ +|+||-+ ..+ .++++. . .+.++. ...|...+...|++....+++++++
T Consensus 32 PLi~~~l~~l~~~~~~~---~IvVvt~--~~~----~i~~~~---~-~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~ 96 (371)
T 1w55_A 32 PLWLYATKNLSSFYPFK---KIVVTSS--NIT----YMKKFT---K-NYEFIE--GGDTRAESLKKALELIDSEFVMVSD 96 (371)
T ss_dssp EHHHHHHHHHHTTSCCS---CEEEEES--CHH----HHHTTC---S-SSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEE
T ss_pred EHHHHHHHHHHccCCCC---eEEEEcC--CHH----HHHHHh---C-CCEEEe--CCCChHHHHHHHHHhcCCCeEEEEe
Confidence 68888888887532222 7777766 221 223221 1 255552 3456778888888887789999999
Q ss_pred CCCc-cCCCChHHHHHhhhcCCC
Q psy8674 363 AHCE-VGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 363 ~D~~-~~~~~l~~l~~~~~~~~~ 384 (439)
+|.- ++++.+..+++.+.+.+.
T Consensus 97 ~D~Pli~~~~i~~li~~~~~~~a 119 (371)
T 1w55_A 97 VARVLVSKNLFDRLIENLDKADC 119 (371)
T ss_dssp TTCTTCCHHHHHHHHTTGGGCSE
T ss_pred CCcccCCHHHHHHHHHHHHhcCC
Confidence 9986 578899999988876543
No 78
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=83.98 E-value=4.3 Score=35.03 Aligned_cols=99 Identities=9% Similarity=0.086 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcC----CcEEEEEcCCCCCHHHHHHHHHhhc-----
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFN----GKVRLIRNTEREGLIRTRSRGAKES----- 353 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~----~~v~~i~~~~~~g~~~a~n~g~~~a----- 353 (439)
..|..+|+.+.+....+ +|+||-+....+ .++.+...++ ....+. +...|...+.-.|+...
T Consensus 32 pli~~~l~~l~~~~~~~---~i~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~~~~ 102 (236)
T 2vsh_A 32 PILIHTIEKFVLEPSIE---KIVVGVHGDWVS----HAEDLVDKYLPLYKERIIIT--KGGADRNTSIKNIIEAIDAYRP 102 (236)
T ss_dssp EHHHHHHHHHHTCTTCC---CEEEEECGGGHH----HHHHHHHHHCGGGGGGEEEE--ECCSSHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHcCCCCC---eEEEEeCHHHHH----HHHHHHHhccccccCceEEE--CCCCchHHHHHHHHHHHHhhcc
Confidence 68888898887643222 677775533212 2333333322 123333 22346677777777765
Q ss_pred --CCCEEEEEcCCC-ccCCCChHHHHHhhhcCCC-EEEEee
Q psy8674 354 --RGEVIVFLDAHC-EVGLNWLPPLLAPIYSDRK-IMTVPV 390 (439)
Q Consensus 354 --~~d~i~~ld~D~-~~~~~~l~~l~~~~~~~~~-~~v~~~ 390 (439)
..++++++++|. .+++..+..+++.+...+. .+++|.
T Consensus 103 ~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 143 (236)
T 2vsh_A 103 LTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDAVDTVVEA 143 (236)
T ss_dssp CCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSEEEEEEEC
T ss_pred CCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCcEEEEEec
Confidence 348999999999 5678899999998876543 334444
No 79
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=83.66 E-value=5.8 Score=36.10 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC---------------CCCCHHHHHH
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT---------------EREGLIRTRS 347 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~---------------~~~g~~~a~n 347 (439)
..|..+|+.+.+... .+|+||-+....+.+.+.+.... .....+.++..+ +..|.+.+..
T Consensus 34 pli~~~l~~~~~~~~----~~i~vv~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~ 108 (303)
T 3pnn_A 34 TIMDYSVYDAIRAGF----GRLVFVIRHSFEKEFREKILTKY-EGRIPVELVFQELDRLPEGFSCPEGREKPWGTNHAVL 108 (303)
T ss_dssp CHHHHHHHHHHHHTC----CEEEEEECGGGHHHHHHHTHHHH-TTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHH
T ss_pred eHHHHHHHHHHHCCC----CeEEEEcCchHHHHHHHHHHHHh-ccCCcEEEEecccccccccccccccccccCCcHHHHH
Confidence 688888888876532 27777765332222222222211 112347776555 4688999999
Q ss_pred HHHhhcCCCEEEEEcCCCccCCCChHHHHHhhhc
Q psy8674 348 RGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYS 381 (439)
Q Consensus 348 ~g~~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~ 381 (439)
.+......+ ++++.+|..+..+.+..|++...+
T Consensus 109 ~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 109 MGRDAIREP-FAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp TTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHT
T ss_pred HHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHH
Confidence 888877544 566789998877778999988764
No 80
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=82.82 E-value=5 Score=34.30 Aligned_cols=90 Identities=8% Similarity=0.061 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc-CCCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES-RGEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a-~~d~i~~l 361 (439)
..|..+++.+......+ +|+||-+.... + .+..+.. ...+.++.. ..+.+.+...|++.. ..++++++
T Consensus 31 pli~~~l~~l~~~~~~~---~i~vv~~~~~~---~-~~~~~~~--~~~v~~~~~--~~~~~~~i~~al~~~~~~~~vlv~ 99 (223)
T 2xwl_A 31 PLLEHALSGLRASGVID---RIVIAVPPALT---D-ESKLVFG--GEDSVIVSG--GVDRTESVALALEAAGDAEFVLVH 99 (223)
T ss_dssp EHHHHHHHHHHHHSCCS---EEEEEECGGGH---H-HHHHHTC--BTTEEEEEC--CSSHHHHHHHHHTTCTTCSEEEEC
T ss_pred EHHHHHHHHHhcCCCCC---eEEEEEcccHH---H-HHHHHhc--cCCeEEEcC--CCCHHHHHHHHHHhcCCCCEEEEE
Confidence 68888888887643222 77777553221 1 2333321 125766643 245677888888887 67899999
Q ss_pred cCCCc-cCCCChHHHHHhh-hcCC
Q psy8674 362 DAHCE-VGLNWLPPLLAPI-YSDR 383 (439)
Q Consensus 362 d~D~~-~~~~~l~~l~~~~-~~~~ 383 (439)
++|.. +++..+..+++.+ ...+
T Consensus 100 ~~D~P~~~~~~i~~l~~~~~~~~~ 123 (223)
T 2xwl_A 100 DAARALTPPALIARVVAALKEGHS 123 (223)
T ss_dssp CTTCTTCCHHHHHHHHHHHHHTCS
T ss_pred cCCcccCCHHHHHHHHHHHhhcCC
Confidence 99985 5788899999987 4443
No 81
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=81.87 E-value=18 Score=34.87 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=45.6
Q ss_pred cEEEEEecCCCChhHHHHhhhhhcc--CcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEe
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESR--GEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMT 73 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~--g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v 73 (439)
.++++..++..|.+.+.-.|++..+ .+.++++++|.. +.+..++.+++.+.+....++
T Consensus 75 ~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~ 135 (468)
T 1hm9_A 75 QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVAT 135 (468)
T ss_dssp SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred CcEEEeCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEE
Confidence 4777776777798888888887765 689999999996 688889999998876554433
No 82
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=81.85 E-value=4.9 Score=36.97 Aligned_cols=97 Identities=7% Similarity=-0.052 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHH------HHH------------H--cCCcEEEEEcCCCCCH
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLED------YIQ------------R--FNGKVRLIRNTEREGL 342 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~------~~~------------~--~~~~v~~i~~~~~~g~ 342 (439)
..|..+|+.+..... .+|+||-+...+ .+.+.+.. +.. . .+..+.++..+...|.
T Consensus 44 pli~~~l~~l~~~gi----~~iivv~~~~~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt 118 (323)
T 2pa4_A 44 PGIELIAAEAAELGA----TRLAIITAPNKA-GVLAHFERSSELEETLMERGKTDQVEIIRRAADLIKAVPVTQDKPLGL 118 (323)
T ss_dssp EHHHHHHHHHHHTTC----CEEEEEECTTCH-HHHHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHCEEEEEECSSCCCH
T ss_pred EHHHHHHHHHHhCCC----CEEEEEecCcHH-HHHHHHhccchhhhhhhccchhhhhhhhhccccCcceEEEeCCccCCc
Confidence 688888888876432 167766554322 11111110 000 0 1124666666677899
Q ss_pred HHHHHHHHhhcCC--CEEEEEcCCCccC-CCChHHHHHhhhcCCC
Q psy8674 343 IRTRSRGAKESRG--EVIVFLDAHCEVG-LNWLPPLLAPIYSDRK 384 (439)
Q Consensus 343 ~~a~n~g~~~a~~--d~i~~ld~D~~~~-~~~l~~l~~~~~~~~~ 384 (439)
+.+...|+..... ++++++.+|..+. +..+..+++.+.....
T Consensus 119 ~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~ 163 (323)
T 2pa4_A 119 GHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG 163 (323)
T ss_dssp HHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence 9999988877643 4589999999996 6889999988876554
No 83
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=81.13 E-value=2.7 Score=36.25 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC--CCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR--GEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~--~d~i~~ 360 (439)
..|..+++.+.+.... .+|+||-+...+ + +.+.+...+...+.++. ...|...+.-.|++... .+++++
T Consensus 33 pli~~~l~~l~~~~~~---~~ivvv~~~~~~---~-~~~~~~~~~~~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~ 103 (228)
T 2yc3_A 33 PIALYSFFTFSRMPEV---KEIVVVCDPFFR---D-IFEEYEESIDVDLSFAI--PGKERQDSVYSGLQEIDVNSELVCI 103 (228)
T ss_dssp EHHHHHHHHHHHCTTE---EEEEEECCGGGH---H-HHHTTTTTSSSEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEE
T ss_pred EHHHHHHHHHHcCCCC---CeEEEEEChHHH---H-HHHHHHHhCCCcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEE
Confidence 6888888888764221 267777443211 1 33333222222355553 23577788888887765 489999
Q ss_pred EcCCC-ccCCCChHHHHHhhhcCCC
Q psy8674 361 LDAHC-EVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 361 ld~D~-~~~~~~l~~l~~~~~~~~~ 384 (439)
+|+|. .+++..+..+++.+...+.
T Consensus 104 ~d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 104 HDSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp EETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred ecCCCccCCHHHHHHHHHHHHhcCc
Confidence 99997 4578889999988765443
No 84
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=80.70 E-value=1.7 Score=39.07 Aligned_cols=55 Identities=13% Similarity=-0.008 Sum_probs=45.0
Q ss_pred cEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCC----chHHHHHHHhcCCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLN----WLPPLLAPIYSDRK 70 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~----~l~~l~~~~~~~~~ 70 (439)
.|.++..++..|.+.|.-.|+.....+.++++++|+.+.++ .+..+++.+.+...
T Consensus 96 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 96 CFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 57777767778999998888887767889999999988888 79999998876444
No 85
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=80.19 E-value=3.5 Score=40.04 Aligned_cols=90 Identities=12% Similarity=0.106 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC--CCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR--GEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~--~d~i~~ 360 (439)
..|..+|+.+.+... .+|+||-+.. .+ .+.++... .+.++..+...|.+.+.-.|++... .+.+++
T Consensus 40 pli~~~l~~l~~~g~----~~iivv~~~~-~~----~i~~~~~~---~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv 107 (468)
T 1hm9_A 40 SMLEHVFRSVGAIQP----EKTVTVVGHK-AE----LVEEVLAG---QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLV 107 (468)
T ss_dssp EHHHHHHHHHHTTCC----SEEEEEECTT-HH----HHHHSSSS---SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEE
T ss_pred cHHHHHHHHHHhcCC----CCEEEEECCC-HH----HHHHHhCC---CcEEEeCCccCChHHHHHHHHHHhccCCCeEEE
Confidence 688889998876531 2777775432 11 22222211 4666766667789999888888765 689999
Q ss_pred EcCCCc-cCCCChHHHHHhhhcCCC
Q psy8674 361 LDAHCE-VGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 361 ld~D~~-~~~~~l~~l~~~~~~~~~ 384 (439)
+++|.. +.+..+..+++.+.+...
T Consensus 108 ~~~D~P~i~~~~i~~l~~~~~~~~~ 132 (468)
T 1hm9_A 108 IAGDTPLITGESLKNLIDFHINHKN 132 (468)
T ss_dssp EETTCTTCCHHHHHHHHHHHHHTTC
T ss_pred EeCCccccCHHHHHHHHHHHHhcCC
Confidence 999996 578889999988765543
No 86
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=79.08 E-value=12 Score=33.06 Aligned_cols=87 Identities=9% Similarity=0.140 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC--CCCCHHHHHHHHHhh---cCCCE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT--EREGLIRTRSRGAKE---SRGEV 357 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~--~~~g~~~a~n~g~~~---a~~d~ 357 (439)
..|..+|+.+..... . +|+||-+. + .+.++...+ .+.++..+ ...|.+ ....++.. ...++
T Consensus 28 pli~~~l~~l~~~~~--~--~ivvv~~~--~-----~i~~~~~~~--~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~ 93 (262)
T 1vic_A 28 PMIQHVFEKALQSGA--S--RVIIATDN--E-----NVADVAKSF--GAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEI 93 (262)
T ss_dssp EHHHHHHHHHHHTTC--S--EEEEEESC--H-----HHHHHHHHT--TCEEEECCCSSCCHHH-HHHHHHHHTTCCTTCE
T ss_pred EHHHHHHHHHHhCCC--c--eEEEECCc--H-----HHHHHHHhc--CCEEEECCccccCChH-HHHHHHHHhccCCCCE
Confidence 688889998877543 2 78887642 2 223333343 35555543 223433 22223332 25789
Q ss_pred EEEEcCCCc-cCCCChHHHHHhhhcCC
Q psy8674 358 IVFLDAHCE-VGLNWLPPLLAPIYSDR 383 (439)
Q Consensus 358 i~~ld~D~~-~~~~~l~~l~~~~~~~~ 383 (439)
++++++|.. +++..+..+++.+...+
T Consensus 94 vlv~~~D~P~i~~~~i~~l~~~~~~~~ 120 (262)
T 1vic_A 94 IVNIQGDEPLIPPVIVRQVADNLAKFN 120 (262)
T ss_dssp EEECCTTCTTCCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCcCccCHHHHHHHHHHHHhcC
Confidence 999999995 57888999998876543
No 87
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=77.86 E-value=6.5 Score=37.89 Aligned_cols=88 Identities=16% Similarity=0.152 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC-CCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~-~d~i~~l 361 (439)
..|..+|+.+.+... + +|+|+-+.. . + .+.++.... .+.++..+...|.+.+...+++... .++++++
T Consensus 34 pli~~~l~~l~~~~~-~---~iivv~~~~-~---~-~i~~~~~~~--~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~ 102 (456)
T 2v0h_A 34 PMVKHVIDTAHQLGS-E---NIHLIYGHG-G---D-LMRTHLANE--QVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVL 102 (456)
T ss_dssp EHHHHHHHHHHHTTC-S---CEEEEECTT-H---H-HHHHHTTTC--CCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEE
T ss_pred cHHHHHHHHHHhCCC-C---cEEEEeCCC-H---H-HHHHHhhcC--CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEE
Confidence 688888998877542 1 666665432 1 2 333333322 3667766777888888888888875 7899999
Q ss_pred cCCCc-cCCCChHHHHHhhhc
Q psy8674 362 DAHCE-VGLNWLPPLLAPIYS 381 (439)
Q Consensus 362 d~D~~-~~~~~l~~l~~~~~~ 381 (439)
++|.. +++..+..+++.+.+
T Consensus 103 ~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 103 YGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp ETTCTTCCHHHHHHHHHHCCT
T ss_pred cCCcceeCHHHHHHHHHHHhc
Confidence 99995 578889999988765
No 88
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=77.58 E-value=1.9 Score=36.20 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=40.4
Q ss_pred HHHHHHhcCCcEEEEEec-CCCChhHHHHhhhhhc--cCcEEEEecCCcc-cCCCchHHHHHH
Q psy8674 6 LEDYIERFNGKVRLIRNT-EREGLIRTRSRGAKES--RGEVIVFLDAHCE-VGLNWLPPLLAP 64 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~-~n~G~a~arN~G~~~A--~g~~i~flD~D~~-~~~~~l~~l~~~ 64 (439)
+.++++.+ .++++.++ ...|.+.+.-.|++.. ..++++++++|+. +++..++.+++.
T Consensus 60 ~~~~~~~~--~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 60 VRAAMALD--GTDVVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp HHHHSCCT--TSEEEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHhccC--CCEEEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 34444333 36677644 3358888888888876 4689999999995 688899999887
No 89
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=77.54 E-value=2.6 Score=36.14 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=47.6
Q ss_pred HHHHHHhcCCcEEEEEec-CCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEeeee
Q psy8674 6 LEDYIERFNGKVRLIRNT-EREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPV 76 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~-~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 76 (439)
++.+.+.++ ++++.+. ...|...+.-.|++.+ .+++ ++.+|+- ++++.++.+++.+.+.+..++.+.
T Consensus 51 ~~~~~~~~~--~~~v~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 51 AEKLSSRYE--AEFIWDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp HHHHHTTSC--SCEECCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcC--CeEEecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 444444343 6667543 3457778999999988 8999 9999996 599999999998875344444433
No 90
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=77.34 E-value=8.6 Score=33.20 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcC-CcEEEEEcCCCCCHHHHHHHHHhhcC-CCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFN-GKVRLIRNTEREGLIRTRSRGAKESR-GEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~v~~i~~~~~~g~~~a~n~g~~~a~-~d~i~~ 360 (439)
..|..+++.+...... .+|+||-+...+. ..+ + ..++ ..+.++.. ..|...+...|++... .+++++
T Consensus 36 pll~~~i~~l~~~~~~---~~ivvv~~~~~~~-~~~-~----~~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~lv 104 (236)
T 1i52_A 36 TILEHSVHALLAHPRV---KRVVIAISPGDSR-FAQ-L----PLANHPQITVVDG--GDERADSVLAGLKAAGDAQWVLV 104 (236)
T ss_dssp EHHHHHHHHHHTSTTE---EEEEEEECTTCCS-GGG-S----GGGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEEE
T ss_pred EHHHHHHHHHHhCCCC---CeEEEEeCccHHH-HHH-H----HhcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEEE
Confidence 6788888888754322 2777776543222 221 1 1221 14666542 3577788888888874 799999
Q ss_pred EcCCCc-cCCCChHHHHHhhhcCC-C-EEEEeee
Q psy8674 361 LDAHCE-VGLNWLPPLLAPIYSDR-K-IMTVPVI 391 (439)
Q Consensus 361 ld~D~~-~~~~~l~~l~~~~~~~~-~-~~v~~~~ 391 (439)
+++|.. ++++.+..+++.+...+ . ..++|..
T Consensus 105 ~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 138 (236)
T 1i52_A 105 HDAARPCLHQDDLARLLALSETSRTGGILAAPVR 138 (236)
T ss_dssp CCTTCTTCCHHHHHHHHGGGGTCSSCEEEEEECC
T ss_pred EcCccccCCHHHHHHHHHHHHhcCCeEEEEEecc
Confidence 999986 47888999999887654 3 3345543
No 91
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=76.90 E-value=3.6 Score=35.55 Aligned_cols=62 Identities=8% Similarity=0.079 Sum_probs=43.7
Q ss_pred HHHHHHHhcCCcEEEEEec--CCCChhHHHHhhhhhccCcEEEEecCCc-ccCCCchHHHHHHHhcCCC
Q psy8674 5 KLEDYIERFNGKVRLIRNT--EREGLIRTRSRGAKESRGEVIVFLDAHC-EVGLNWLPPLLAPIYSDRK 70 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~~~--~n~G~a~arN~G~~~A~g~~i~flD~D~-~~~~~~l~~l~~~~~~~~~ 70 (439)
.+.++++++ ++++..+ ...|.+++.+ |++....++++++++|. .+++..++.+++.+.+...
T Consensus 52 ~i~~~~~~~---~~~~~~~~~~~~g~~~~~~-~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 52 RVKEVVEDL---CEVFLTPSDLPSGSDRVLY-VVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp HHHHHHTTT---SEEEECCTTCCSHHHHHHH-HHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhc---eEEEECCcccccchHHHHH-HHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 445555544 3444432 3567777774 66666789999999999 6788899999998876553
No 92
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=76.89 E-value=3.7 Score=34.82 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=39.8
Q ss_pred cEEEEEecC-C-CChhHHHHhhhhhccCcEEEEecCCc-ccCCCchHHHHHH
Q psy8674 16 KVRLIRNTE-R-EGLIRTRSRGAKESRGEVIVFLDAHC-EVGLNWLPPLLAP 64 (439)
Q Consensus 16 ~i~~i~~~~-n-~G~a~arN~G~~~A~g~~i~flD~D~-~~~~~~l~~l~~~ 64 (439)
.++++.++. . .|.+.+.-.|++....++++++++|. .++++.++.+++.
T Consensus 65 ~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 356665442 2 58889999999988899999999999 5799999999887
No 93
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=76.71 E-value=5.6 Score=34.63 Aligned_cols=62 Identities=15% Similarity=0.198 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCCcEEEEEec--CCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcC
Q psy8674 4 KKLEDYIERFNGKVRLIRNT--EREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSD 68 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~~--~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~ 68 (439)
+.+.+++++++ ++++.++ ...|.+.+. .|++....+.++++++|.. +++..++.+++.+.+.
T Consensus 53 ~~i~~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 53 PRVEQAVQAFG--GKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp HHHHHHHHHTT--CEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcC--CeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 34566776664 6777753 335666655 4555556799999999996 5888999999988765
No 94
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=76.07 E-value=4.2 Score=36.85 Aligned_cols=55 Identities=13% Similarity=-0.004 Sum_probs=45.2
Q ss_pred cEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccC--CCchHHHHHHHhcCCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVG--LNWLPPLLAPIYSDRK 70 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~--~~~l~~l~~~~~~~~~ 70 (439)
++.++..++..|.+.|.-.|+.....+.++++++|..+. +..++.+++.+.+...
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 588888777789999988888776678899999999987 6889999998865443
No 95
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=75.76 E-value=1.7 Score=36.53 Aligned_cols=89 Identities=10% Similarity=0.185 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcC--CcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFN--GKVRLIRNTEREGLIRTRSRGAKESRGEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~--~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ 360 (439)
..|..+++.+.+.. -+ +|+||-+...+. ..+.+.. .++ ..+.++. ....|.+.+...|++.. .+.+++
T Consensus 28 pli~~~l~~l~~~~-~~---~v~vv~~~~~~~-i~~~~~~---~~~~~~~~~~~~-~~~~g~~~si~~al~~~-~~~vlv 97 (196)
T 3rsb_A 28 CLIDYVVSPLLKSK-VN---NIFIATSPNTPK-TKEYINS---AYKDYKNIVVID-TSGKGYIEDLNECIGYF-SEPFLV 97 (196)
T ss_dssp EHHHHHHHHHHSSS-CC---CEEEECCTTCHH-HHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEEE
T ss_pred EHHHHHHHHHHHCC-CC---EEEEEeCCChHH-HHHHHHh---hccCCCCEEEEE-CCCCCcHHHHHHHHHhC-CCCEEE
Confidence 68889999887654 22 777775443322 2212222 121 1456553 33455555666677766 889999
Q ss_pred EcCCCc-cCCCChHHHHHhhhc
Q psy8674 361 LDAHCE-VGLNWLPPLLAPIYS 381 (439)
Q Consensus 361 ld~D~~-~~~~~l~~l~~~~~~ 381 (439)
+.+|.- +++..+..+++.+.+
T Consensus 98 ~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 98 VSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp EETTEESCCHHHHHHHHHHHHH
T ss_pred EeCCcccCCHHHHHHHHHHHHh
Confidence 999996 589999999998875
No 96
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=74.60 E-value=3.9 Score=34.44 Aligned_cols=57 Identities=11% Similarity=0.138 Sum_probs=42.1
Q ss_pred cEEEEEecC-CCChhHHHHhhhhhccC-cEEEEecCCcc-cCCCchHHHHHHHhcCCCeEee
Q psy8674 16 KVRLIRNTE-REGLIRTRSRGAKESRG-EVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTV 74 (439)
Q Consensus 16 ~i~~i~~~~-n~G~a~arN~G~~~A~g-~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v~ 74 (439)
.+ ++.++. ..|.+.+.-.|++..+. ++++++++|.- ++++.++.+++.+ +....++.
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~ 120 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVI 120 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEE
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEE
Confidence 46 666443 35888888888888765 89999999995 6889999998877 44434443
No 97
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=73.97 E-value=5 Score=34.72 Aligned_cols=84 Identities=8% Similarity=0.153 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCC-CCHHHHHHHHHhhcCCCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTER-EGLIRTRSRGAKESRGEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~-~g~~~a~n~g~~~a~~d~i~~l 361 (439)
..|..+++.+... . + +|+||- ...+. +.+.+.+.++..+.++..+.. .|.+.+...|++....+ ++++
T Consensus 46 pli~~~l~~l~~~-~-~---~i~vv~-~~~~~----~~~~~~~~~~~~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~ 114 (232)
T 2xme_A 46 EIILRTMKLLSPH-V-S---EFIIVA-SRYAD----DIDAFLKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILT 114 (232)
T ss_dssp EHHHHHHHHHGGG-E-E---EEEEEE-STTHH----HHHHHHTTSCCCEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEE
T ss_pred EHHHHHHHHHHHh-C-C---EEEEEe-CChHH----HHHHHHHhcCCcEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEE
Confidence 6788888888765 2 1 677776 32222 333333333335777765543 68888888888887744 5678
Q ss_pred cCCCccCCCChHHHHH
Q psy8674 362 DAHCEVGLNWLPPLLA 377 (439)
Q Consensus 362 d~D~~~~~~~l~~l~~ 377 (439)
.+|..++++.+..+++
T Consensus 115 ~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 115 MGDHVYSQQFIEKAVR 130 (232)
T ss_dssp ETTEEECHHHHHHHTT
T ss_pred cCCcccCHHHHHHHHh
Confidence 8998776666666655
No 98
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=72.17 E-value=11 Score=32.36 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=44.9
Q ss_pred HHHHHHHHhcCCcEEEEEecC-----CCChhHHHHhhhhhc-cCcEEEEecCCcc-cCCCchHHHHHHHhcCCCe
Q psy8674 4 KKLEDYIERFNGKVRLIRNTE-----REGLIRTRSRGAKES-RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKI 71 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~~~-----n~G~a~arN~G~~~A-~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~ 71 (439)
+.+.++++++. ++++..++ ..|-..+.-.|++.. ..++++++++|+- +++..++.+++.+.++...
T Consensus 54 ~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~ 126 (229)
T 1qwj_A 54 DEIENVAKQFG--AQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYD 126 (229)
T ss_dssp HHHHHHHHHTT--CEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCS
T ss_pred HHHHHHHHHcC--CEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCC
Confidence 34666776664 56666442 223334455666665 5799999999996 5889999999988765544
No 99
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=71.26 E-value=9.9 Score=34.35 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=43.7
Q ss_pred cEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccC----CC---chHHHHHHHhcCCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVG----LN---WLPPLLAPIYSDRK 70 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~----~~---~l~~l~~~~~~~~~ 70 (439)
+|.++..+...|.+.|.-.++.....+.++++.+|..+. +. .+..+++.+.+...
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 567777677789999888888776667899999999986 45 79999988865443
No 100
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=71.12 E-value=8.5 Score=32.71 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=42.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEcCCCcc-CCCChHHHHHhhhcCCCEEEEeee
Q psy8674 330 KVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEV-GLNWLPPLLAPIYSDRKIMTVPVI 391 (439)
Q Consensus 330 ~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld~D~~~-~~~~l~~l~~~~~~~~~~~v~~~~ 391 (439)
.+.++..+ .|.+.++..|++.. .+.++++-+|.-+ +++.|..+++ .+...+++|..
T Consensus 66 ~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~---~~~~~vv~p~~ 122 (211)
T 2i5e_A 66 EARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS---TEKDVCIVPGK 122 (211)
T ss_dssp SSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT---CSSSEEEEECG
T ss_pred CCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc---cCCCeEEEEec
Confidence 36667655 78999999998877 6889999999885 7888888877 34456777764
No 101
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=70.16 E-value=54 Score=28.46 Aligned_cols=60 Identities=8% Similarity=0.061 Sum_probs=44.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhc---CCCEEEEEcCCCc-cCCCChHHHHHhhhcCCCEEEEeeee
Q psy8674 331 VRLIRNTEREGLIRTRSRGAKES---RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVPVID 392 (439)
Q Consensus 331 v~~i~~~~~~g~~~a~n~g~~~a---~~d~i~~ld~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~ 392 (439)
+.++. ....|.+..+..|++.+ ..+-++++-+|+- +++..|..+++.+.. ...+++|..+
T Consensus 77 ~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~-~d~VigPa~d 140 (242)
T 3cgx_A 77 HMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH-YDAAIGPAFD 140 (242)
T ss_dssp SEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT-CSEEEEEBTT
T ss_pred cEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc-CCeEEEEcCC
Confidence 44443 45568999999999876 3578999999988 578889999887765 4567777543
No 102
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=70.07 E-value=4.7 Score=34.72 Aligned_cols=67 Identities=7% Similarity=0.047 Sum_probs=44.1
Q ss_pred HHHHHHHhcCCcEEEEEec-----CCCChhHHHHhhhhhcc--CcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEe
Q psy8674 5 KLEDYIERFNGKVRLIRNT-----EREGLIRTRSRGAKESR--GEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMT 73 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~~~-----~n~G~a~arN~G~~~A~--g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v 73 (439)
.+.++++++. ++++..+ ...|.+.+.-.|++... .+.++++++|.. +++..++.+++.+.+....++
T Consensus 56 ~i~~~~~~~~--~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~ 130 (228)
T 1ezi_A 56 LIAEEAKNFG--VEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSV 130 (228)
T ss_dssp HHHHHHHHTT--CEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCE
T ss_pred HHHHHHHHcC--CEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 4566666664 5555544 23455566666776653 589999999996 588889999887765543333
No 103
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=69.69 E-value=15 Score=33.34 Aligned_cols=61 Identities=8% Similarity=0.043 Sum_probs=45.0
Q ss_pred HHHHHHHHh-cC-CcEEEEEecCCCChhHHHHhhhhhcc-CcEEEEecCCccc-CCCchHHHHHH
Q psy8674 4 KKLEDYIER-FN-GKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFLDAHCEV-GLNWLPPLLAP 64 (439)
Q Consensus 4 ~~l~~~~~~-~~-~~i~~i~~~~n~G~a~arN~G~~~A~-g~~i~flD~D~~~-~~~~l~~l~~~ 64 (439)
+.+.++++. +. +++.++..+...|.+.+.-.++.... .++++++.+|..+ +++.+..+++.
T Consensus 64 ~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 64 FLALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 355666665 43 26777777777899888777777665 4579999999987 66778888876
No 104
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=69.48 E-value=15 Score=30.93 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcC-CCCCHHHHHHHHHhhcCCCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNT-EREGLIRTRSRGAKESRGEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~g~~~a~n~g~~~a~~d~i~~l 361 (439)
..|..+++.+... . .+|+||-+.... + . +. .++++..+ ...|.+.+...|++....+.++++
T Consensus 41 pll~~~l~~l~~~--~---~~i~vv~~~~~~---~-~---~~-----~~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~ 103 (201)
T 2e8b_A 41 KVIERVYETAKSV--F---KEVYIVAKDREK---F-S---FL-----NAPVVLDEFEESASIIGLYTALKHAKEENVFVL 103 (201)
T ss_dssp HHHHHHHHHHHTT--C---SEEEEEESCSGG---G-G---GG-----TCCEEECCCSSCCHHHHHHHHHHHCSSSEEEEE
T ss_pred EHHHHHHHHHHHh--C---CEEEEEeCcHHH---h-h---cC-----CceEEecCCCCCCcHHHHHHHHHHcCCCCEEEE
Confidence 3455566666543 1 277777654322 1 1 11 24555543 457899999999998888999999
Q ss_pred cCCCcc-CCCChHH-HH
Q psy8674 362 DAHCEV-GLNWLPP-LL 376 (439)
Q Consensus 362 d~D~~~-~~~~l~~-l~ 376 (439)
.+|..+ +++.+.. ++
T Consensus 104 ~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 104 SGDLPLMKKETVLYVLE 120 (201)
T ss_dssp ETTCTTCCHHHHHHHHH
T ss_pred eCCcCcCCHHHHHHHHh
Confidence 999875 6777777 76
No 105
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=69.30 E-value=4.8 Score=33.62 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=41.8
Q ss_pred HHHHHHHhcCCcEEEEEec-CCCChhHHHHhhhhhc--cCcEEEEecCCcc-cCCCchHHHHHH
Q psy8674 5 KLEDYIERFNGKVRLIRNT-EREGLIRTRSRGAKES--RGEVIVFLDAHCE-VGLNWLPPLLAP 64 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~~~-~n~G~a~arN~G~~~A--~g~~i~flD~D~~-~~~~~l~~l~~~ 64 (439)
.+.++++.+ .++++..+ ...|.+.+.-.|++.. ..++++++++|+. +++..++.+++.
T Consensus 59 ~~~~~~~~~--~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 59 EVLEKVELD--GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp HHHHHSCCT--TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHHhccC--CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 344444433 36666643 3457778888888877 5699999999997 488889999887
No 106
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=66.02 E-value=26 Score=31.43 Aligned_cols=66 Identities=8% Similarity=0.052 Sum_probs=44.6
Q ss_pred HHHHHHHHh---cCCcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHHhcCC
Q psy8674 4 KKLEDYIER---FNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 4 ~~l~~~~~~---~~~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~~~~~ 69 (439)
+.+++++.. +..++.++..+...|.+.|.-.|+.....+-++++.+|..+.+.-+..+++.+.+..
T Consensus 61 ~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~ 129 (293)
T 1fxo_A 61 PRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQ 129 (293)
T ss_dssp HHHHHHHTTSGGGTCEEEEEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCC
T ss_pred HHHHHHHhcccccCceEEEeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcC
Confidence 445666654 333566777667789988888888766555555566998875466888888775433
No 107
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=64.96 E-value=12 Score=32.26 Aligned_cols=98 Identities=5% Similarity=0.048 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhc---CCCEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKES---RGEVIV 359 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a---~~d~i~ 359 (439)
..|..+++.+.+....+ +|+||-+.... + .++++.. +...+.... ...+...+.-.|++.+ ..++++
T Consensus 42 pli~~~i~~l~~~~~~~---~ivVv~~~~~~---~-~~~~~~~-~~~~~~~~~--gg~~~~~sv~~al~~~~~~~~~~vl 111 (234)
T 1vpa_A 42 MLFEYPLSTFLKSEAID---GVVIVTRREWF---E-VVEKRVF-HEKVLGIVE--GGDTRSQSVRSALEFLEKFSPSYVL 111 (234)
T ss_dssp ETTHHHHHHHHHCTTCS---EEEEEECGGGH---H-HHHTTCC-CTTEEEEEE--CCSSHHHHHHHHHHHHGGGCCSEEE
T ss_pred EHHHHHHHHHHcCCCCC---eEEEEEChHHH---H-HHHHHhc-cCCceEEeC--CCCcHHHHHHHHHHHhhhcCCCEEE
Confidence 57888888887643222 77777653221 1 2222211 122233322 2223555666676655 368999
Q ss_pred EEcCCCc-cCCCChHHHHHhhhcCCCE-EEEee
Q psy8674 360 FLDAHCE-VGLNWLPPLLAPIYSDRKI-MTVPV 390 (439)
Q Consensus 360 ~ld~D~~-~~~~~l~~l~~~~~~~~~~-~v~~~ 390 (439)
++++|.- ++++.+..+++.+...+.. .++|.
T Consensus 112 v~~~D~Pli~~~~i~~l~~~~~~~~~~i~~~~~ 144 (234)
T 1vpa_A 112 VHDSARPFLRKKHVSEVLRRARETGAATLALKN 144 (234)
T ss_dssp EEETTSCCCCHHHHHHHHHHHHHHSEEEEEEEC
T ss_pred EecCcccCCCHHHHHHHHHHHHhcCCEEEEEec
Confidence 9999985 5788999999887654432 24444
No 108
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=64.49 E-value=24 Score=30.89 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=55.3
Q ss_pred EEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcC-CcE-EEEEcCCCCCHHHHHHHHHhh
Q psy8674 275 LVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFN-GKV-RLIRNTEREGLIRTRSRGAKE 352 (439)
Q Consensus 275 ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~v-~~i~~~~~~g~~~a~n~g~~~ 352 (439)
+|..+. ..|..+|+++.+..... +|+||-....+ ..+.+.+....++ ..+ .++..+...|.+.|.-.|+..
T Consensus 25 lpv~gk--pli~~~l~~l~~~~gi~---~iivv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~ 97 (255)
T 4evw_A 25 LEAHGQ--TLFEHSVNSFAAYFAST---PFLFIVRNVYD--TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEE 97 (255)
T ss_dssp CEETTE--EHHHHHHGGGGGGTTTS---CEEEEEESSTT--HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHH
T ss_pred cEECCe--EHHHHHHHHHhccCCCc---eEEEEECchhh--hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHH
Confidence 344454 58888888887632222 66555543332 2224444444332 122 344456678999999999887
Q ss_pred c------CCCEEEEEcCCCccCCCChHH
Q psy8674 353 S------RGEVIVFLDAHCEVGLNWLPP 374 (439)
Q Consensus 353 a------~~d~i~~ld~D~~~~~~~l~~ 374 (439)
. ..+-++++++|..+.+..+..
T Consensus 98 l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 98 LAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp HHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred HhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 6 355688999999775544444
No 109
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=62.20 E-value=12 Score=33.46 Aligned_cols=47 Identities=21% Similarity=0.394 Sum_probs=30.9
Q ss_pred cceEEEEeHHHHHHhCCC-------CCCCCCccchhhHHHHHHH-HhCCcEEEec
Q psy8674 133 AGGLFAMDRAFFLELGGY-------DPGLLVWGGENFELSFKIW-MCGGSIEWVP 179 (439)
Q Consensus 133 ~g~~~~irr~~f~~iGgf-------de~~~~~~~ED~Dl~~Rl~-~~G~~i~~~p 179 (439)
.|+.++++|++..++-.. ++.-.....||..+.+-+. +.|.+....|
T Consensus 156 GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 156 GGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 356799999999887631 1100111237999999998 8898865543
No 110
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=61.63 E-value=5.9 Score=33.12 Aligned_cols=62 Identities=15% Similarity=0.261 Sum_probs=42.0
Q ss_pred HHHHHHHHh-cC--CcEEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhc
Q psy8674 4 KKLEDYIER-FN--GKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYS 67 (439)
Q Consensus 4 ~~l~~~~~~-~~--~~i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~ 67 (439)
+.+.+++++ ++ .++.++. +...|.+.+...|++.. .+.++++++|.- +++..++.+++.+.+
T Consensus 54 ~~i~~~~~~~~~~~~~~~~~~-~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 54 PKTKEYINSAYKDYKNIVVID-TSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp HHHHHHHHHHTTTTTEEEE---------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCEEEEE-CCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 445666665 32 2577776 44567777777888777 899999999996 599999999999875
No 111
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=61.26 E-value=23 Score=34.64 Aligned_cols=72 Identities=11% Similarity=0.100 Sum_probs=51.5
Q ss_pred hHHHHHHHHh----cCCcEEEEEecCCCChhHHHHhhhhhccC---cEEEEecCCc-ccCCCchHHHHHHHhcCCCeEee
Q psy8674 3 DKKLEDYIER----FNGKVRLIRNTEREGLIRTRSRGAKESRG---EVIVFLDAHC-EVGLNWLPPLLAPIYSDRKIMTV 74 (439)
Q Consensus 3 ~~~l~~~~~~----~~~~i~~i~~~~n~G~a~arN~G~~~A~g---~~i~flD~D~-~~~~~~l~~l~~~~~~~~~~~v~ 74 (439)
.+.+++|+.+ ++.+|+++.-++..|.+.|.-.++..-+. ..++++..|+ .+..+.+..|++........++.
T Consensus 66 ~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti 145 (501)
T 3st8_A 66 HQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTV 145 (501)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceE
Confidence 3556666643 44579999878889999999888876643 3566666666 46788899999988876655443
No 112
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.14 E-value=16 Score=33.45 Aligned_cols=55 Identities=9% Similarity=-0.067 Sum_probs=43.4
Q ss_pred cEEEEEecCCCChhHHHHhhhhhccC--cEEEEecCCcccC-CCchHHHHHHHhcCCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESRG--EVIVFLDAHCEVG-LNWLPPLLAPIYSDRK 70 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~g--~~i~flD~D~~~~-~~~l~~l~~~~~~~~~ 70 (439)
+|.++..++..|.+.|.-.|+..... ++++++++|..+. +..+..+++.+.+...
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~ 163 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG 163 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence 57777777778999998888876543 4488999999996 6889999998876554
No 113
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=59.61 E-value=44 Score=30.01 Aligned_cols=65 Identities=14% Similarity=0.071 Sum_probs=42.7
Q ss_pred HHHHHHHHh---cCCcEEEEEecCCCChhHHHHhhhhhcc-CcEEEEecCCcccCCCchHHHHHHHhcCC
Q psy8674 4 KKLEDYIER---FNGKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFLDAHCEVGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 4 ~~l~~~~~~---~~~~i~~i~~~~n~G~a~arN~G~~~A~-g~~i~flD~D~~~~~~~l~~l~~~~~~~~ 69 (439)
+.+++++.. +..++.++..+...|.+.|.-.|+.... .++++++ +|..+...-+..+++.+.+..
T Consensus 62 ~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~ 130 (295)
T 1lvw_A 62 PLYRDLLGDGSQFGVRFSYRVQEEPRGIADAFIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAASLE 130 (295)
T ss_dssp HHHHHHHTTSGGGTSEEEEEECSSCCCGGGHHHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHTCC
T ss_pred HHHHHHhhhccccCceEEEeeCCCCCChHHHHHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHHcC
Confidence 445666654 3334667776666798888888877665 4555555 998874466788888775433
No 114
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=59.33 E-value=55 Score=30.94 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=59.5
Q ss_pred EEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHH-cC-------CcEEEEEcCC----C---
Q psy8674 275 LVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQR-FN-------GKVRLIRNTE----R--- 339 (439)
Q Consensus 275 ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~-------~~v~~i~~~~----~--- 339 (439)
+|.-+.. ..|..+|+.+.+... .+|+||-+...+ .+.++... ++ ..+.++.... .
T Consensus 38 lpi~gk~-pli~~~l~~l~~~gi----~~i~vv~~~~~~-----~i~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 107 (420)
T 3brk_X 38 VYFGGKA-RIIDFALSNALNSGI----RRIGVATQYKAH-----SLIRHLQRGWDFFRPERNESFDILPASQRVSETQWY 107 (420)
T ss_dssp SEETTTE-ETHHHHHHHHHHTTC----CEEEEEECTTCH-----HHHHHHHHHSCCCCGGGTCEEEEECCC-------CC
T ss_pred cccCCCC-cHHHHHHHHHHhCCC----CeEEEEeCCChH-----HHHHHHhhhhccccccccCCEEEeCccccccCCccc
Confidence 4555653 478888888876532 277777654332 22222222 22 1255553221 2
Q ss_pred CCHHHHHHHHHhhcC---CCEEEEEcCCCccCCCChHHHHHhhhcCCC
Q psy8674 340 EGLIRTRSRGAKESR---GEVIVFLDAHCEVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 340 ~g~~~a~n~g~~~a~---~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~ 384 (439)
.|.+.+...++.... .+.++++.+|... +..+..+++.+.....
T Consensus 108 ~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~ 154 (420)
T 3brk_X 108 EGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSGA 154 (420)
T ss_dssp CCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcCC
Confidence 688888888877654 4899999999954 4558888887765443
No 115
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=59.07 E-value=36 Score=30.62 Aligned_cols=64 Identities=13% Similarity=0.116 Sum_probs=41.9
Q ss_pred HHHHHHHHh---cCCcEEEEEecCCCChhHHHHhhhhhccC-cEEEEecCCcccCCCchHHHHHHHhcC
Q psy8674 4 KKLEDYIER---FNGKVRLIRNTEREGLIRTRSRGAKESRG-EVIVFLDAHCEVGLNWLPPLLAPIYSD 68 (439)
Q Consensus 4 ~~l~~~~~~---~~~~i~~i~~~~n~G~a~arN~G~~~A~g-~~i~flD~D~~~~~~~l~~l~~~~~~~ 68 (439)
+.+++++.. +.-++.++..+...|.+.|.-.|+..... ++++++ +|..+.+.-+..+++.+.+.
T Consensus 62 ~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~ 129 (296)
T 1mc3_A 62 GYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAAR 129 (296)
T ss_dssp HHHHHHHTTSGGGTCEEEEEECSSCCCSTHHHHHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTTC
T ss_pred HHHHHHHhcccccCceEEEeccCCCCCHHHHHHHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHHc
Confidence 445666654 33346677666777888888888776654 455544 99876445678888877543
No 116
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=57.01 E-value=83 Score=29.95 Aligned_cols=100 Identities=11% Similarity=0.077 Sum_probs=60.2
Q ss_pred EEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHc---------CCcEEEEEc---CC----
Q psy8674 275 LVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRF---------NGKVRLIRN---TE---- 338 (439)
Q Consensus 275 ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~---------~~~v~~i~~---~~---- 338 (439)
+|..+.. ..|..+|+.+.+... .+|+||-+...+. +.+.+. +.+ ...+.++.. +.
T Consensus 46 lpi~g~~-pli~~~l~~l~~~g~----~~i~vv~~~~~~~-i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 116 (451)
T 1yp2_A 46 VPLGANY-RLIDIPVSNCLNSNI----SKIYVLTQFNSAS-LNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPENPDW 116 (451)
T ss_dssp CEETTTE-ETTHHHHHHHHHTTC----CEEEEEESCCCHH-HHHHHH---HHCC--------CCEEEEEESCSSTTSCCC
T ss_pred eEECCcc-eeHHHHHHHHHHCCC----CEEEEEeccCHHH-HHHHHh---hhhhcccccccccCcEEEeccccccccccc
Confidence 4556663 477788888876532 2777776544332 221222 211 112455531 11
Q ss_pred CCCHHHHHHHHHhhcC---CCEEEEEcCCCccCCCChHHHHHhhhcCCC
Q psy8674 339 REGLIRTRSRGAKESR---GEVIVFLDAHCEVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 339 ~~g~~~a~n~g~~~a~---~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~ 384 (439)
..|.+.+.-.++.... .+.++++.+|... +..+..+++.......
T Consensus 117 ~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~ 164 (451)
T 1yp2_A 117 FQGTADAVRQYLWLFEEHTVLEYLILAGDHLY-RMDYEKFIQAHRETDA 164 (451)
T ss_dssp CCSHHHHHHHTHHHHTTSCCSEEEEECSCEEC-CCCHHHHHHHHHHTTC
T ss_pred ccCcHHHHHHHHHHHHhcCCCeEEEecCcEEE-cCCHHHHHHHHHHcCC
Confidence 3688888888877664 5899999999955 4568889887765443
No 117
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=56.86 E-value=22 Score=31.21 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=40.4
Q ss_pred HHHHHHHhcCCcEEEEEec--CCCChhHHHHhhh---hhccCcEEEEecCCcc-cCCCchHHHHHHHhcCCCe
Q psy8674 5 KLEDYIERFNGKVRLIRNT--EREGLIRTRSRGA---KESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKI 71 (439)
Q Consensus 5 ~l~~~~~~~~~~i~~i~~~--~n~G~a~arN~G~---~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~ 71 (439)
.+.+++++++ ++++.++ ...|.+... .++ .....++++++++|.. +++..++.+++.+.+....
T Consensus 53 ~i~~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~ 122 (262)
T 1vic_A 53 NVADVAKSFG--AEVCMTSVNHNSGTERLA-EVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVN 122 (262)
T ss_dssp HHHHHHHHTT--CEEEECCCSSCCHHHHHH-HHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhcC--CEEEECCccccCChHHHH-HHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCC
Confidence 4566666664 6667653 234443211 222 2225689999999995 6888999999988764433
No 118
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=56.54 E-value=17 Score=34.86 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=47.0
Q ss_pred HHHHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhcc-CcEEEEecCCcc-cCCCchHHHHHHHhc
Q psy8674 4 KKLEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFLDAHCE-VGLNWLPPLLAPIYS 67 (439)
Q Consensus 4 ~~l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~-g~~i~flD~D~~-~~~~~l~~l~~~~~~ 67 (439)
+.+++++.++ .++++..++..|.+.+.-.+++... .++++++++|.. +++..++.+++.+.+
T Consensus 60 ~~i~~~~~~~--~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 60 DLMRTHLANE--QVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp HHHHHHTTTC--CCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred HHHHHHhhcC--CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 3444554443 4778776777788888888887775 789999999995 688889999888765
No 119
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=54.96 E-value=28 Score=32.00 Aligned_cols=94 Identities=12% Similarity=0.171 Sum_probs=53.9
Q ss_pred EEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcC
Q psy8674 275 LVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESR 354 (439)
Q Consensus 275 ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~ 354 (439)
+|..++. ..|..+++.+....... +|+||-+... .. .+.+.....+ ...++..+...|.+.+.-.++....
T Consensus 28 l~l~g~~-pli~~~l~~l~~~~~~~---~iivvt~~~~---~~-~i~~~l~~~~-~~~ii~e~~~~gta~ai~~a~~~~~ 98 (336)
T 2x65_A 28 LKLFGNK-SLMRWTFERVLEEMDPK---DVIVVTHKDY---VE-RTKKELPELP-DENIIAEPMKKNTAPACFIGTKLAD 98 (336)
T ss_dssp CCCBTTB-CHHHHHHHHHHTTCCGG---GEEEEEEGGG---HH-HHHHHCTTSC-GGGEEEESSCCCHHHHHHHHHTTSC
T ss_pred EECCCCC-cHHHHHHHHHhccCCCC---cEEEEcChHH---HH-HHHHHhhccc-cceEEeCCCCCCcHHHHHHHHHhhC
Confidence 3445545 78889999887642222 6666654321 12 3333322222 1234445666788888777766543
Q ss_pred -CCEEEEEcCCCccC-CCChHHHHH
Q psy8674 355 -GEVIVFLDAHCEVG-LNWLPPLLA 377 (439)
Q Consensus 355 -~d~i~~ld~D~~~~-~~~l~~l~~ 377 (439)
.++++++.+|..+. +..+..+++
T Consensus 99 ~~~~~lvl~~D~~~~~~~~~~~~l~ 123 (336)
T 2x65_A 99 DDEPVLVLPADHRIPDTKKFWKTVK 123 (336)
T ss_dssp TTCEEEEEETTCBCCCHHHHHHHHH
T ss_pred CCCEEEEEcCCceeccHHHHHHHHH
Confidence 57899999999875 344444433
No 120
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=54.79 E-value=9.6 Score=32.81 Aligned_cols=53 Identities=4% Similarity=0.049 Sum_probs=37.3
Q ss_pred HHhcCCcEEEEEecCC-CChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHH
Q psy8674 10 IERFNGKVRLIRNTER-EGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLA 63 (439)
Q Consensus 10 ~~~~~~~i~~i~~~~n-~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~ 63 (439)
.+++...++++.++.. .|.+.+.-.|++..+.+ ++++.+|+.++++.++.+++
T Consensus 77 ~~~~~~~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 77 LKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp HTTSCCCEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEEETTEEECHHHHHHHTT
T ss_pred HHhcCCcEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEEcCCcccCHHHHHHHHh
Confidence 4444446888885543 68888888888887754 55789999887666665544
No 121
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=48.55 E-value=1.1e+02 Score=26.13 Aligned_cols=93 Identities=9% Similarity=0.030 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEE---------------------EEcCCCCC
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRL---------------------IRNTEREG 341 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~---------------------i~~~~~~g 341 (439)
..|..+|+.+.+... . +|+||-... .+.+.+.+........ .+.+ ...+...|
T Consensus 34 pli~~~l~~l~~~g~--~--~i~vv~~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g 107 (259)
T 1tzf_A 34 PILWHIMKMYSVHGI--K--DFIICCGYK-GYVIKEYFANYFLHMS-DVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSM 107 (259)
T ss_dssp EHHHHHHHHHHHTTC--C--EEEEEECTT-HHHHHHHHHTHHHHHS-CEEEEGGGTEEEETTCCCCCCEEEEEECCSSCC
T ss_pred EHHHHHHHHHHHCCC--C--EEEEEcccC-HHHHHHHHhhcccccc-cccccccccceeeeeccccccceeeeecccccC
Confidence 588888888876531 2 777775432 2222223332211001 2332 22234568
Q ss_pred HHHHHHHHHhhc-CCCEEEEEcCCCccCCCChHHHHHhhhcC
Q psy8674 342 LIRTRSRGAKES-RGEVIVFLDAHCEVGLNWLPPLLAPIYSD 382 (439)
Q Consensus 342 ~~~a~n~g~~~a-~~d~i~~ld~D~~~~~~~l~~l~~~~~~~ 382 (439)
.+.+...+.... ..+.++++.+|.. .+..+..+++.....
T Consensus 108 t~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~ 148 (259)
T 1tzf_A 108 TGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAH 148 (259)
T ss_dssp HHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHh
Confidence 888888887776 3577888899985 456788998877543
No 122
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=47.64 E-value=19 Score=31.33 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=43.2
Q ss_pred HHHHHHhcC--CcEEEEEecCCCChhHHHHhhhhhcc-------CcEEEEecCCcc-cCCCchHHHHHHHhcCCC
Q psy8674 6 LEDYIERFN--GKVRLIRNTEREGLIRTRSRGAKESR-------GEVIVFLDAHCE-VGLNWLPPLLAPIYSDRK 70 (439)
Q Consensus 6 l~~~~~~~~--~~i~~i~~~~n~G~a~arN~G~~~A~-------g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~ 70 (439)
+++.++++. ..+.++... .|...+.-.|++... .++++++|+|.- +++..++.+++.+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~--~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 63 AEDNIKKYISDDRIVVIEGG--EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp HHHHHHHHCCCTTEEEEECC--SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHhCCCCCEEEECCC--CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 445555542 357776532 355556566666543 589999999985 689999999999987653
No 123
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=45.83 E-value=26 Score=29.84 Aligned_cols=44 Identities=7% Similarity=-0.030 Sum_probs=33.8
Q ss_pred CChhHHHHhhhhhc----c---CcEEEEecCCc-ccCCCchHHHHHHHhcCC
Q psy8674 26 EGLIRTRSRGAKES----R---GEVIVFLDAHC-EVGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 26 ~G~a~arN~G~~~A----~---g~~i~flD~D~-~~~~~~l~~l~~~~~~~~ 69 (439)
.|...+.-.|+..+ . .++++++++|. .+++..++.+++.+.+..
T Consensus 84 ~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 84 ADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp SSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred CchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 45666666677665 2 48999999999 578889999999887654
No 124
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=45.83 E-value=47 Score=29.88 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=45.0
Q ss_pred HHHHHHHHh-c--CCcEEEEEec---------------CCCChhHHHHhhhhhccCcEEEEecCCcccCCCchHHHHHHH
Q psy8674 4 KKLEDYIER-F--NGKVRLIRNT---------------EREGLIRTRSRGAKESRGEVIVFLDAHCEVGLNWLPPLLAPI 65 (439)
Q Consensus 4 ~~l~~~~~~-~--~~~i~~i~~~---------------~n~G~a~arN~G~~~A~g~~i~flD~D~~~~~~~l~~l~~~~ 65 (439)
+.+.+++.. . ..+++++..+ +..|.+.|.-.+.....+++ +++++|+.+.++.++.+++.+
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~~~~-lV~~gD~l~~~~~~~~l~~~~ 139 (303)
T 3pnn_A 61 KEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIREPF-AVINADDFYGRNGFEVLARKL 139 (303)
T ss_dssp HHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCCSCE-EEEESSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCcEEEEecccccccccccccccccccCCcHHHHHHHHHhcCCCE-EEEECCeecCHHHHHHHHHHH
Confidence 445555543 1 1357787655 56899888888887775554 566899988888899999988
Q ss_pred hc
Q psy8674 66 YS 67 (439)
Q Consensus 66 ~~ 67 (439)
.+
T Consensus 140 ~~ 141 (303)
T 3pnn_A 140 MT 141 (303)
T ss_dssp HT
T ss_pred HH
Confidence 75
No 125
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=45.57 E-value=19 Score=30.61 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=38.3
Q ss_pred cEEEEEecCCCChhHHHHhhhhhcc--CcEEEEecCCc-ccCCCchHHHHHHHhcCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESR--GEVIVFLDAHC-EVGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~--g~~i~flD~D~-~~~~~~l~~l~~~~~~~~ 69 (439)
.++++. ...|...+.-.|++... .++++.+|+|. .+++..++.+++.+.+.+
T Consensus 73 ~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~ 127 (228)
T 2yc3_A 73 DLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVG 127 (228)
T ss_dssp EEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHS
T ss_pred cEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcC
Confidence 466554 23577777777777665 48999999997 568889999999886544
No 126
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=42.34 E-value=2.2e+02 Score=26.62 Aligned_cols=105 Identities=14% Similarity=0.018 Sum_probs=59.0
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC--CCC---H
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE--REG---L 342 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~--~~g---~ 342 (439)
.+++..+|.+++.. +.+++.++.+-. +.. .=+|-||-.|+....+ .+......++ ++.++.... ..| .
T Consensus 83 ~~kiAflil~h~d~-~~l~rll~~ly~---p~n-~y~IHvD~ks~~~~~~-~~~~~~~~f~-NV~v~~~~~~v~WGg~S~ 155 (391)
T 2gak_A 83 GFPIAYSIVVHHKI-EMLDRLLRAIYM---PQN-FYCIHVDRKAEESFLA-AVQGIASCFD-NVFVASQLESVVYASWTR 155 (391)
T ss_dssp TSCEEEEEEECSCH-HHHHHHHHHHCC---TTS-EEEEEECTTSCHHHHH-HHHHHHHTCT-TEEECSSCCCCCTTSHHH
T ss_pred CCCEEEEEEecCCH-HHHHHHHHHHhC---CCC-eEEEEEeCCCCHHHHH-HHHHHHhcCC-CEEEeccCcccccCCchH
Confidence 36799999999877 778777776621 221 1346666666654333 4444444555 788763222 233 2
Q ss_pred HHHHHHHHhh----c-CCCEEEEEcCCCccCCCChHHHHHhhh
Q psy8674 343 IRTRSRGAKE----S-RGEVIVFLDAHCEVGLNWLPPLLAPIY 380 (439)
Q Consensus 343 ~~a~n~g~~~----a-~~d~i~~ld~D~~~~~~~l~~l~~~~~ 380 (439)
..|--.+++. . .-+|++.|.+.|.+-- ....+...+.
T Consensus 156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLk-t~~~i~~~l~ 197 (391)
T 2gak_A 156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIK-TNLEIVRKLK 197 (391)
T ss_dssp HHHHHHHHHHHHHHCSCCCEEEEEETTCEESS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCCcccc-CHHHHHHHHH
Confidence 2222223332 2 5689999988887532 2444555554
No 127
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=42.05 E-value=39 Score=28.43 Aligned_cols=48 Identities=8% Similarity=0.113 Sum_probs=37.5
Q ss_pred cEEEEEecCCCChhHHHHhhhhhc-cCcEEEEecCCcc-cCCCchHHHHHHH
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKES-RGEVIVFLDAHCE-VGLNWLPPLLAPI 65 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A-~g~~i~flD~D~~-~~~~~l~~l~~~~ 65 (439)
.++++.. ..+.+.+.-.|++.. ..++++++++|.. +++..++.+++.+
T Consensus 69 ~v~~~~~--~~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 69 DSVIVSG--GVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp TEEEEEC--CSSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CeEEEcC--CCCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 5777653 245667777788777 6789999999995 6888999999988
No 128
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=41.36 E-value=40 Score=28.85 Aligned_cols=49 Identities=10% Similarity=0.176 Sum_probs=36.8
Q ss_pred CCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCCCeEeee
Q psy8674 24 EREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDRKIMTVP 75 (439)
Q Consensus 24 ~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 75 (439)
...|.+.+.-.|++... +.++++++|.. +++..++.+++ + .....++.+
T Consensus 68 ~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~ 117 (232)
T 2dpw_A 68 DRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYP 117 (232)
T ss_dssp CCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEE
T ss_pred CCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEE
Confidence 44688888888888776 89999999996 58888999998 4 333334433
No 129
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=40.65 E-value=21 Score=29.92 Aligned_cols=46 Identities=13% Similarity=0.076 Sum_probs=36.4
Q ss_pred EEEEEec-CCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHH-HH
Q psy8674 17 VRLIRNT-EREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPP-LL 62 (439)
Q Consensus 17 i~~i~~~-~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~-l~ 62 (439)
++++.++ ...|.+.+.-.|++..+.+.++++++|+. ++++.++. ++
T Consensus 72 ~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 72 APVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred ceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5566644 45688999999998888899999999996 47777777 66
No 130
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=40.13 E-value=49 Score=28.27 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEc
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLD 362 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld 362 (439)
..|..+++.+.... . +|+||-+ .+ ... ++. .+++ +...|.+.+...|++... +.+++++
T Consensus 33 pll~~~l~~l~~~~---~--~ivvv~~--~~-~i~----~~~-----~~~~---~~~~g~~~~i~~a~~~~~-~~~lv~~ 91 (232)
T 2dpw_A 33 PMVEWVLEALYAAG---L--SPVYVGE--NP-GLV----PAP-----ALTL---PDRGGLLENLEQALEHVE-GRVLVAT 91 (232)
T ss_dssp ETHHHHHHHHHHTT---C--EEEEESC--CS-SCS----SCC-----SEEE---CCCSSHHHHHHHHHHTCC-SEEEEEE
T ss_pred EHHHHHHHHHHhcC---C--EEEEEeC--hH-HHh----hhc-----CeEe---cCCCCHHHHHHHHHHHcC-CCEEEEe
Confidence 68888888887643 2 7777733 22 111 111 3544 556788899999998877 8999999
Q ss_pred CCCc-cCCCChHHHHHhhhcCCCEEEEee
Q psy8674 363 AHCE-VGLNWLPPLLAPIYSDRKIMTVPV 390 (439)
Q Consensus 363 ~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 390 (439)
+|.. +++..+..+++ . .....++++.
T Consensus 92 ~D~P~~~~~~i~~l~~-~-~~~~~~~~~~ 118 (232)
T 2dpw_A 92 GDIPHLTEEAVRFVLD-K-APEAALVYPI 118 (232)
T ss_dssp TTCTTCCHHHHHHHHH-H-CCSCSEEEEE
T ss_pred CCcccCCHHHHHHHHh-c-CCCCCEEEEE
Confidence 9996 57888999998 4 3333344443
No 131
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=38.39 E-value=37 Score=28.79 Aligned_cols=52 Identities=13% Similarity=0.001 Sum_probs=39.0
Q ss_pred cEEEEEecCCCChhHHHHhhhhhc-------cCcEEEEecCCcc-cCCCchHHHHHHHhcCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKES-------RGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A-------~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~ 69 (439)
.++++ ....|.+.+.-.|+... ..+.++++++|.. +++..+..+++.+.++.
T Consensus 74 ~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 74 VRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp SEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred ceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 56655 34567777777777655 4689999999985 58888999999886554
No 132
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=38.08 E-value=93 Score=28.56 Aligned_cols=114 Identities=8% Similarity=0.116 Sum_probs=74.3
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCC-------C
Q psy8674 268 LPKASVILVFHNEGFSSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTER-------E 340 (439)
Q Consensus 268 ~p~vsiiip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~-------~ 340 (439)
.+.-++|+-+.|.+...+.+++++|...=...+.+-.|+++|..=++...+.+.++. .+.+++...++. .
T Consensus 26 r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~---sg~v~Fg~Ip~e~W~~P~~I 102 (348)
T 1s4n_A 26 KPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAV---SSEVKFGILPKEHWSYPEWI 102 (348)
T ss_dssp CCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHC---SSCEEEEECCGGGSSCCTTS
T ss_pred CCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhc---CcceEEEEcCHHHcCCCCCc
Confidence 467999999999988889999999887655566778999999987665554555443 345666544331 1
Q ss_pred CHHHH------------------------HHHHH-----hhcCCCEEEEEcCCCccCCCChHHHHHhhhcCCC
Q psy8674 341 GLIRT------------------------RSRGA-----KESRGEVIVFLDAHCEVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 341 g~~~a------------------------~n~g~-----~~a~~d~i~~ld~D~~~~~~~l~~l~~~~~~~~~ 384 (439)
....+ .+.|. ...+.+|..-+++|..+.-+-=-..-..++++..
T Consensus 103 d~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~M~~nnK 175 (348)
T 1s4n_A 103 NQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQENEK 175 (348)
T ss_dssp CHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHHhHhcCc
Confidence 11111 12221 1234789999999988765554455666666554
No 133
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=35.21 E-value=93 Score=26.93 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC--CCCHHHHHHHHHhhcCCCEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE--REGLIRTRSRGAKESRGEVIVF 360 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~--~~g~~~a~n~g~~~a~~d~i~~ 360 (439)
..|..+|+.+.+... . +|+||-+...+ .++..+ +.+ .+.++..+. ..|.+.+...++.... + +++
T Consensus 57 pli~~~l~~l~~~g~-~---~i~vv~~~~~~-~i~~~~----~~~--~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv 123 (254)
T 1jyk_A 57 PLIEYQIEFLKEKGI-N---DIIIIVGYLKE-QFDYLK----EKY--GVRLVFNDKYADYNNFYSLYLVKEELA-N-SYV 123 (254)
T ss_dssp EHHHHHHHHHHHTTC-C---CEEEEECTTGG-GGTHHH----HHH--CCEEEECTTTTTSCTHHHHHTTGGGCT-T-EEE
T ss_pred EHHHHHHHHHHHCCC-C---eEEEEeCCcHH-HHHHHH----HhC--CcEEEECCCccCCCcHHHHHHHHHHCC-C-EEE
Confidence 688889998876532 1 66666543322 233222 333 356665543 3566777777776653 4 668
Q ss_pred EcCCCccCCCChHHHH
Q psy8674 361 LDAHCEVGLNWLPPLL 376 (439)
Q Consensus 361 ld~D~~~~~~~l~~l~ 376 (439)
+.+|..+..+.+..++
T Consensus 124 ~~~D~~~~~~~~~~~~ 139 (254)
T 1jyk_A 124 IDADNYLFKNMFRNDL 139 (254)
T ss_dssp EETTEEESSCCCCSCC
T ss_pred EeCCcccCHHHHHHHH
Confidence 9999987666665543
No 134
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=34.99 E-value=2.3e+02 Score=25.70 Aligned_cols=21 Identities=29% Similarity=0.147 Sum_probs=16.1
Q ss_pred HhhcCCCEEEEEcCCCccCCC
Q psy8674 350 AKESRGEVIVFLDAHCEVGLN 370 (439)
Q Consensus 350 ~~~a~~d~i~~ld~D~~~~~~ 370 (439)
......+-|++||+|..+..+
T Consensus 90 ~~l~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 90 WSLTQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp GGCTTCSEEEEECTTEEECSC
T ss_pred hHhcCCCeEEEEeCCEEeccC
Confidence 334557899999999998654
No 135
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=34.68 E-value=55 Score=27.89 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=39.0
Q ss_pred cEEEEEecCCCChhHHHHhhhhhcc-CcEEEEecCCcc-cCCCchHHHHHHHhcCC
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESR-GEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~-g~~i~flD~D~~-~~~~~l~~l~~~~~~~~ 69 (439)
.++++. + ..|...+.-.|++.++ .++++++++|.. ++++.++.+++.+.+..
T Consensus 75 ~v~~~~-~-~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 75 QITVVD-G-GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp TEEEEE-C-CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CEEEEC-C-CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 466554 2 2477777777887774 689999999986 58889999998876554
No 136
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=33.77 E-value=51 Score=30.79 Aligned_cols=51 Identities=12% Similarity=0.119 Sum_probs=38.4
Q ss_pred EEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCC
Q psy8674 17 VRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 17 i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~ 69 (439)
++++. ...|...+.-.|++....++++++++|.- +++..++.+++.+.+.+
T Consensus 67 v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 67 YEFIE--GGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp SEEEE--CCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCS
T ss_pred CEEEe--CCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcC
Confidence 55553 23456677777887777899999999995 58889999998877553
No 137
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=31.86 E-value=36 Score=28.65 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=30.7
Q ss_pred CChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHH
Q psy8674 26 EGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLA 63 (439)
Q Consensus 26 ~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~ 63 (439)
.|++.+...|++.+ .+.++++-+|+- ++++.++.+++
T Consensus 74 ~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 74 KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 68888888888776 688999999997 48888888776
No 138
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=30.39 E-value=33 Score=29.48 Aligned_cols=51 Identities=8% Similarity=0.030 Sum_probs=37.8
Q ss_pred EEEEEecCCCChhHHHHhhhhhccCcEEEEecCCcc-cCCCchHHHHHHHhcCC
Q psy8674 17 VRLIRNTEREGLIRTRSRGAKESRGEVIVFLDAHCE-VGLNWLPPLLAPIYSDR 69 (439)
Q Consensus 17 i~~i~~~~n~G~a~arN~G~~~A~g~~i~flD~D~~-~~~~~l~~l~~~~~~~~ 69 (439)
+.++. ...|...+.-.|++.++.++++++++|.. +++..++.+++.+.+.+
T Consensus 84 v~~~~--~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 84 AVFLE--GGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp CEEEE--CCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred cEEEe--CCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 44543 23456677777777777899999999985 68899999998876543
No 139
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=30.33 E-value=38 Score=29.12 Aligned_cols=83 Identities=10% Similarity=0.028 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHhhcCCCEEEEEc
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGAKESRGEVIVFLD 362 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~~~a~~d~i~~ld 362 (439)
..|..+++. .. . ..+|+||-+. . .++ +. . ..+.++. ...|...+.-.|++....+++++++
T Consensus 53 pli~~~l~~--~~---~-~~~ivvv~~~-~---~~~-~~----~--~~v~~~~--~~~~~~~~i~~al~~~~~~~vlv~~ 113 (236)
T 2px7_A 53 TLLEWTLAA--FR---D-AAEVLVALPP-G---AEP-PK----G--LGAVFLE--GGATRQASVARLLEAASLPLVLVHD 113 (236)
T ss_dssp BHHHHHHHH--TT---T-CSEEEEEECT-T---CCC-CT----T--CSCEEEE--CCSSHHHHHHHHHHHCCSSEEEECC
T ss_pred EHHHHHHHh--cC---C-CCeEEEEeCH-H---HHH-hh----c--CCcEEEe--CCCchHHHHHHHHHHcCCCeEEEec
Confidence 577777776 21 1 1277777653 1 111 11 1 1355553 2346777788888887789999999
Q ss_pred CCCc-cCCCChHHHHHhhhcCCC
Q psy8674 363 AHCE-VGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 363 ~D~~-~~~~~l~~l~~~~~~~~~ 384 (439)
+|.. +++..+..+++.+...+.
T Consensus 114 ~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2px7_A 114 VARPFVSRGLVARVLEAAQRSGA 136 (236)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHSE
T ss_pred CccccCCHHHHHHHHHHHHhcCC
Confidence 9975 578889999988765443
No 140
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=29.71 E-value=1.5e+02 Score=25.33 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=35.6
Q ss_pred cEEEEEecCCCChhHHHHhhhhhcc----CcEEEEecCCcc-cCCCchHHHHHHHhc
Q psy8674 16 KVRLIRNTEREGLIRTRSRGAKESR----GEVIVFLDAHCE-VGLNWLPPLLAPIYS 67 (439)
Q Consensus 16 ~i~~i~~~~n~G~a~arN~G~~~A~----g~~i~flD~D~~-~~~~~l~~l~~~~~~ 67 (439)
.++++... .+...+.-.|++... .++++++|+|.- ++++.++.+++.+.+
T Consensus 73 ~v~~v~gg--~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 73 RAMIVAGG--SNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp GCEEEECC--SSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred CeEEEcCC--CchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 35566421 233445556776665 489999999986 599999999999876
No 141
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=29.18 E-value=1.3e+02 Score=26.39 Aligned_cols=33 Identities=6% Similarity=0.144 Sum_probs=16.3
Q ss_pred hcCCCEEEEEcCCC-ccCCCChHHHHHhhhcCCC
Q psy8674 352 ESRGEVIVFLDAHC-EVGLNWLPPLLAPIYSDRK 384 (439)
Q Consensus 352 ~a~~d~i~~ld~D~-~~~~~~l~~l~~~~~~~~~ 384 (439)
.++.|.|++.|... .++++.++.+.+...++..
T Consensus 48 L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGg 81 (259)
T 3rht_A 48 LAKQDLVILSDYPAERMTAQAIDQLVTMVKAGCG 81 (259)
T ss_dssp HHTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCE
T ss_pred HhcCCEEEEcCCccccCCHHHHHHHHHHHHhCCe
Confidence 34555555555443 2444555555555554443
No 142
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=27.56 E-value=98 Score=26.60 Aligned_cols=47 Identities=11% Similarity=-0.113 Sum_probs=33.0
Q ss_pred cCCCChhHHHHhhhhhc-cCcEEEEecCCcccCCCchHHHHHHHhcCCC
Q psy8674 23 TEREGLIRTRSRGAKES-RGEVIVFLDAHCEVGLNWLPPLLAPIYSDRK 70 (439)
Q Consensus 23 ~~n~G~a~arN~G~~~A-~g~~i~flD~D~~~~~~~l~~l~~~~~~~~~ 70 (439)
+...|.+.+.-.++... ..+.++++++|... +.-+..+++.+.+...
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~ 150 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVA-DLDIKATIDFHKAHGK 150 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEEE-CCCHHHHHHHHHHHCC
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEec-ccCHHHHHHHHHHhCC
Confidence 34568887777777665 35778889999964 5568888887765443
No 143
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=24.40 E-value=1.3e+02 Score=27.34 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=31.6
Q ss_pred HHHHHHhcCCcEEEEEecCCCChhHHHHhhhhhcc-CcEEEEecCCcccCC
Q psy8674 6 LEDYIERFNGKVRLIRNTEREGLIRTRSRGAKESR-GEVIVFLDAHCEVGL 55 (439)
Q Consensus 6 l~~~~~~~~~~i~~i~~~~n~G~a~arN~G~~~A~-g~~i~flD~D~~~~~ 55 (439)
+.+++...+ ...++..+...|.+.|.-.++.... .++++++.+|..+..
T Consensus 65 i~~~l~~~~-~~~ii~e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~ 114 (336)
T 2x65_A 65 TKKELPELP-DENIIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPD 114 (336)
T ss_dssp HHHHCTTSC-GGGEEEESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCC
T ss_pred HHHHhhccc-cceEEeCCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceecc
Confidence 444444432 2345655777788777766665433 578999999998743
No 144
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=24.05 E-value=45 Score=31.17 Aligned_cols=80 Identities=5% Similarity=0.000 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHhcCCcCCcceEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCC-CCCHHHHHHHHHhhcCCCEEEEE
Q psy8674 283 SSLMRTVHSIIKRTPAQYLEEIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTE-REGLIRTRSRGAKESRGEVIVFL 361 (439)
Q Consensus 283 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~-~~g~~~a~n~g~~~a~~d~i~~l 361 (439)
..|..+|+.+.+... . +|+|+-+.. ..+.+.. ....+.++..+. ..|.+.++..+.+ .+.++++
T Consensus 32 pli~~~l~~l~~~~~--~--~i~vv~~~~----i~~~~~~----~~~~i~~~~~~~~~~g~~~~l~~~~~---~~~~lv~ 96 (401)
T 2ggo_A 32 PLIEYQIEYLRKCGI--R--DITVIVSSK----NKEYFEK----KLKEISIVTQKDDIKGTGAAILSAKF---NDEALII 96 (401)
T ss_dssp EHHHHHHHHHHHTTC--C--EEEEEECGG----GHHHHHH----HCTTCEEEECCTTCCBSTTTGGGCCC---SSEEEEE
T ss_pred eHHHHHHHHHHHCCC--C--EEEEEeCHH----HHHHhhc----cCCcEEEEeCCCCCCChHHHHHHhcc---CCCEEEE
Confidence 688889998876532 2 777775432 2223332 111467776655 4555544433332 6888999
Q ss_pred cCCCccC-CCChHHHHH
Q psy8674 362 DAHCEVG-LNWLPPLLA 377 (439)
Q Consensus 362 d~D~~~~-~~~l~~l~~ 377 (439)
.+|..+. +..+..+++
T Consensus 97 ~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 97 YGDLFFSNEKEICNIIT 113 (401)
T ss_dssp ETTEEESCSHHHHHHTT
T ss_pred eCccccccHHHHHHHHH
Confidence 9999865 566666665
No 145
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=23.19 E-value=1.7e+02 Score=27.33 Aligned_cols=46 Identities=13% Similarity=0.022 Sum_probs=33.7
Q ss_pred CChhHHHHhhhhhcc---CcEEEEecCCcccCCCchHHHHHHHhcCCCeE
Q psy8674 26 EGLIRTRSRGAKESR---GEVIVFLDAHCEVGLNWLPPLLAPIYSDRKIM 72 (439)
Q Consensus 26 ~G~a~arN~G~~~A~---g~~i~flD~D~~~~~~~l~~l~~~~~~~~~~~ 72 (439)
.|.+.+.-.++.... .+.++++++|...+. -+..+++.+.+....+
T Consensus 108 ~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~-~l~~l~~~~~~~~~~~ 156 (420)
T 3brk_X 108 EGTADAVYQNIDIIEPYAPEYMVILAGDHIYKM-DYEYMLQQHVDSGADV 156 (420)
T ss_dssp CCHHHHHHTTHHHHHHHCCSEEEEEESSCEECB-CTHHHHHHHHHTTCSE
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEecccEEEch-HHHHHHHHHHHcCCeE
Confidence 688888877776654 488999999996544 4788888887655443
No 146
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=23.18 E-value=2.8e+02 Score=24.26 Aligned_cols=18 Identities=33% Similarity=0.287 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCccCCC
Q psy8674 353 SRGEVIVFLDAHCEVGLN 370 (439)
Q Consensus 353 a~~d~i~~ld~D~~~~~~ 370 (439)
...+-+++||+|..+..+
T Consensus 94 ~~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 94 TQYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCcceEEEEcCCEeeccC
Confidence 357899999999998654
No 147
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.15 E-value=95 Score=23.84 Aligned_cols=72 Identities=10% Similarity=0.014 Sum_probs=39.7
Q ss_pred eEEEEeCCCChhhHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHH----------hhcCCCEEEEEcCCCccCCCCh
Q psy8674 303 EIILVDDFSSKADLDQKLEDYIQRFNGKVRLIRNTEREGLIRTRSRGA----------KESRGEVIVFLDAHCEVGLNWL 372 (439)
Q Consensus 303 eiivvdd~s~d~t~~~~~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g~----------~~a~~d~i~~ld~D~~~~~~~l 372 (439)
-|||..|.++..+.. .+..++...+-.+.++ +.+.-.+.+ .|. +....-.++++|.....+...+
T Consensus 43 LViiA~D~~p~~~~~-~i~~lc~~~~Ip~~~v--~sk~~LG~a--~G~~k~d~~g~~rk~v~~s~vaI~d~g~~~~~~~~ 117 (126)
T 2xzm_U 43 FVCVAEDCDQGNYVK-LVKALCAKNEIKYVSV--PKRASLGEY--LGHFTANAKGEIKKVKGCSSLAIRKYAPEITEDEK 117 (126)
T ss_dssp EEEEESSCCSTTHHH-HHHHHHHHTTCCEEEE--SCSHHHHHH--HTCCCBCTTCCBSCCCCCCEEEESSCCTTCCHHHH
T ss_pred EEEEeCCCChHHHHH-HHHHHHHHhCCCEEEE--CCHHHHHHH--HCCCccccccCcCceeeEEEEEEEecCcccCHHHH
Confidence 466667776656655 7888888765445444 333223333 333 2223556788877655333355
Q ss_pred HHHHHhh
Q psy8674 373 PPLLAPI 379 (439)
Q Consensus 373 ~~l~~~~ 379 (439)
..|++.+
T Consensus 118 ~~l~~~~ 124 (126)
T 2xzm_U 118 KIIEGAL 124 (126)
T ss_dssp HHHTTSC
T ss_pred HHHHHHh
Confidence 5555544
Done!