Query psy8675
Match_columns 92
No_of_seqs 158 out of 1349
Neff 7.2
Searched_HMMs 29240
Date Sat Aug 17 00:53:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mzw_A Cyclophilin H, U-snRNP- 100.0 2.1E-28 7.1E-33 166.6 9.5 78 11-88 5-82 (177)
2 1a58_A Cyclophilin; isomerase, 100.0 3.3E-28 1.1E-32 165.6 10.2 76 13-88 3-81 (177)
3 2poy_A Peptidyl-prolyl CIS-tra 99.9 8.9E-28 3E-32 164.7 10.2 78 11-88 14-93 (186)
4 1qng_A Peptidyl-prolyl CIS-tra 99.9 7.2E-28 2.5E-32 163.0 9.4 74 15-88 2-76 (170)
5 2wfi_A Peptidyl-prolyl CIS-tra 99.9 2.2E-27 7.4E-32 161.8 11.0 75 14-88 7-84 (179)
6 2igv_A Peptidyl-prolyl CIS-tra 99.9 2.2E-27 7.6E-32 161.0 10.3 74 15-88 2-77 (173)
7 1z81_A Cyclophilin; structural 99.9 2.3E-27 8E-32 167.0 10.3 77 12-88 55-131 (229)
8 2he9_A NK-tumor recognition pr 99.9 3.3E-27 1.1E-31 162.5 10.8 78 11-88 14-94 (192)
9 3pmp_A Cyclophilin A; peptidyl 99.9 3.9E-27 1.3E-31 158.5 10.3 69 15-88 1-69 (164)
10 2z6w_A Peptidyl-prolyl CIS-tra 99.9 4.9E-27 1.7E-31 158.3 10.6 68 16-88 3-70 (165)
11 1ihg_A Cyclophilin 40; ppiase 99.9 6E-27 2E-31 171.7 11.2 74 15-88 14-90 (370)
12 2haq_A Cyclophilin; rotamase, 99.9 5.1E-27 1.7E-31 159.2 9.9 72 12-88 7-78 (172)
13 2cmt_A Peptidyl-prolyl CIS-tra 99.9 7.9E-27 2.7E-31 158.2 10.6 71 13-88 7-77 (172)
14 2r99_A Peptidyl-prolyl CIS-tra 99.9 1.1E-26 3.8E-31 157.6 10.6 71 13-88 8-78 (173)
15 3rdd_A Peptidyl-prolyl CIS-tra 99.9 1.3E-26 4.4E-31 158.6 9.8 71 13-88 19-89 (184)
16 3k2c_A Peptidyl-prolyl CIS-tra 99.9 2.2E-26 7.4E-31 158.5 10.3 71 13-88 24-94 (193)
17 4fru_A Cyclophilin B, peptidyl 99.9 1E-26 3.6E-31 159.0 8.2 72 12-88 8-79 (185)
18 3ich_A Peptidyl-prolyl CIS-tra 99.9 2.3E-26 8E-31 157.8 8.1 72 12-88 11-82 (188)
19 2ose_A Probable peptidyl-proly 99.9 3.1E-26 1.1E-30 161.7 7.6 78 10-87 8-97 (234)
20 2c3b_A Ppiase, cyclophilin; is 99.9 4.8E-25 1.6E-29 149.4 8.1 68 15-88 2-74 (172)
21 1v9t_A Cyclophilin B; beta bar 99.9 2.7E-23 9.1E-28 140.0 8.6 62 14-88 2-63 (166)
22 2hq6_A Serologically defined c 99.9 1.1E-22 3.7E-27 139.3 7.6 63 12-87 20-82 (185)
23 3s6m_A Peptidyl-prolyl CIS-tra 99.9 7.9E-23 2.7E-27 137.6 6.1 60 16-88 3-62 (167)
24 1w74_A Peptidyl-prolyl CIS-tra 99.9 4.1E-22 1.4E-26 137.0 8.8 69 14-87 21-96 (191)
25 3bkp_A Cyclophilin; malaria, i 99.9 3.5E-22 1.2E-26 140.8 8.2 64 12-88 17-80 (232)
26 2x7k_A Peptidyl-prolyl CIS-tra 99.9 4.5E-22 1.6E-26 134.1 7.3 61 15-88 10-70 (166)
27 2b71_A Cyclophilin-like protei 99.9 4.4E-22 1.5E-26 137.3 6.7 62 14-88 36-97 (196)
28 2fu0_A Cyclophilin, putative; 99.9 9.3E-22 3.2E-26 131.9 7.6 60 16-88 5-64 (160)
29 1lop_A Cyclophilin A; rotamase 99.9 5.8E-22 2E-26 133.2 5.9 52 28-87 6-57 (164)
30 2k7n_A Peptidyl-prolyl CIS-tra 99.9 1.5E-21 5.3E-26 135.2 8.1 61 15-88 10-70 (203)
31 2a2n_A Peptidylprolyl isomeras 99.9 1.8E-21 6.3E-26 132.2 8.1 60 16-88 21-80 (176)
32 2poe_A Cyclophilin-like protei 99.8 1.7E-21 5.7E-26 133.3 7.6 62 14-88 14-75 (185)
33 2ok3_A Peptidyl-prolyl CIS-tra 99.8 1.7E-21 5.7E-26 130.7 7.4 53 28-88 7-59 (161)
34 1zkc_A Peptidyl-prolyl CIS-tra 99.8 2.8E-21 9.4E-26 133.4 8.3 60 15-87 18-77 (197)
35 3bo7_A Peptidyl-prolyl CIS-tra 99.8 1.2E-20 4.1E-25 130.4 7.8 60 15-87 5-69 (201)
36 3rfy_A Peptidyl-prolyl CIS-tra 99.8 3.4E-20 1.2E-24 137.8 4.9 66 14-88 168-236 (369)
37 3kop_A Uncharacterized protein 90.0 0.44 1.5E-05 32.2 4.3 34 19-53 22-55 (188)
38 2nnz_A Hypothetical protein; b 88.7 0.48 1.6E-05 30.9 3.7 29 21-52 32-60 (153)
39 2qsw_A Methionine import ATP-b 26.3 97 0.0033 17.7 4.1 34 18-53 53-87 (100)
40 2qrr_A Methionine import ATP-b 24.5 1.1E+02 0.0036 17.6 4.1 34 18-53 53-87 (101)
41 3dhx_A Methionine import ATP-b 20.7 86 0.0029 18.3 2.8 34 18-53 51-85 (106)
No 1
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.95 E-value=2.1e-28 Score=166.57 Aligned_cols=78 Identities=76% Similarity=1.294 Sum_probs=71.9
Q ss_pred hccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 11 LRNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 11 ~~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..++.+|+||||+++++++.|+|+||||.+.||+||+||++||+++++..+++++|+|+.||||+|+|||||||++.+
T Consensus 5 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred ccCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccC
Confidence 346779999999999999999999999999999999999999999887667778899999999999999999999754
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.95 E-value=3.3e-28 Score=165.55 Aligned_cols=76 Identities=42% Similarity=0.867 Sum_probs=68.0
Q ss_pred cCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCC---CCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 13 NQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRD---AVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 13 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~---~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
+..+|+||||+++++++.|+|+||||.+.||+||+||++||+++.+.+ ++++.|+|+.||||+|+|||||||++.+
T Consensus 3 ~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 81 (177)
T 1a58_A 3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKG 81 (177)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSS
T ss_pred CCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCC
Confidence 456899999999999999999999999999999999999999876543 3455699999999999999999999754
No 3
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.95 E-value=8.9e-28 Score=164.66 Aligned_cols=78 Identities=56% Similarity=0.954 Sum_probs=68.4
Q ss_pred hccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccC--CCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 11 LRNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRR--DAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 11 ~~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~--~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.....+|+||||+++++++.|+|+||||.+.||+||+||++||+++.++ .+++++|+|+.||||+|+|||||||++.+
T Consensus 14 ~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 14 LYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred cccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 3457789999999999999999999999999999999999999875544 47888999999999999999999999754
No 4
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.95 E-value=7.2e-28 Score=162.98 Aligned_cols=74 Identities=47% Similarity=0.903 Sum_probs=67.6
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcC-cccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTG-EFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g-~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+|+||||+++++++.|+|+||||.+.||+||+||++||++ +++..+++++|+|+.||||+|+|||||||++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 76 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNG 76 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCC
Confidence 57999999999999999999999999999999999999986 444457788899999999999999999999754
No 5
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.95 E-value=2.2e-27 Score=161.80 Aligned_cols=75 Identities=52% Similarity=0.952 Sum_probs=67.0
Q ss_pred CCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCC---CCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 14 QNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRD---AVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 14 ~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~---~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..+|+||||+++++++.|+|+||||.+.||+||+||++||+|+++.+ ++...|+|+.||||+|+|||||||++.+
T Consensus 7 ~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 84 (179)
T 2wfi_A 7 VQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG 84 (179)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS
T ss_pred CCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCC
Confidence 46899999999999999999999999999999999999999876543 3456699999999999999999999754
No 6
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.95 E-value=2.2e-27 Score=160.96 Aligned_cols=74 Identities=53% Similarity=1.011 Sum_probs=67.0
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCccc--CCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFR--RDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~--~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+|+||||+++++++.|+|+||||.+.||+||+||++||+++++ ..++++.|+|+.||||+|+|||||||++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 77 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRG 77 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCC
Confidence 47899999999999999999999999999999999999998544 336677799999999999999999999754
No 7
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.95 E-value=2.3e-27 Score=167.00 Aligned_cols=77 Identities=61% Similarity=1.162 Sum_probs=70.8
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.++.+++||||+++++++.|+|+||||.+.||+||+||++||+++++.+++++.|+|+.||||+|+|||||||++.+
T Consensus 55 ~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g 131 (229)
T 1z81_A 55 TNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINH 131 (229)
T ss_dssp SSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTS
T ss_pred cCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCC
Confidence 45678999999999999999999999999999999999999999876666777799999999999999999999744
No 8
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.3e-27 Score=162.46 Aligned_cols=78 Identities=44% Similarity=0.860 Sum_probs=66.3
Q ss_pred hccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCC---CCcccccCCeEEEEecCcEEEecCCCC
Q psy8675 11 LRNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRD---AVPIGFKGASFHRVIKDFMIQGGDFVN 87 (92)
Q Consensus 11 ~~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~---~~~~~Y~g~~f~rvi~~~~iqgGD~~~ 87 (92)
+....+|+||||++++++++|+|+||||.+.||+||+||++||+|+++.+ ++...|+|+.||||+|+|||||||++.
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 34578999999999999999999999999999999999999999876543 345569999999999999999999975
Q ss_pred C
Q psy8675 88 V 88 (92)
Q Consensus 88 ~ 88 (92)
+
T Consensus 94 ~ 94 (192)
T 2he9_A 94 G 94 (192)
T ss_dssp S
T ss_pred C
Confidence 3
No 9
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.94 E-value=3.9e-27 Score=158.50 Aligned_cols=69 Identities=45% Similarity=0.853 Sum_probs=64.2
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+|+||||+++++++.|+|+||||.+.||+||+||++||+|+.+++ |+|+.||||+|+|||||||+..+
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~-----Y~g~~fhRvi~~f~iQgGd~~~~ 69 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFG-----YKDSIFHRVIPQFMLQGGDFTRH 69 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-----STTCBEEEEETTTEEEECCTTTS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCc-----ccCCEEEEEECCCeEEeCCCCCC
Confidence 3789999999999999999999999999999999999999877655 99999999999999999997654
No 10
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.94 E-value=4.9e-27 Score=158.25 Aligned_cols=68 Identities=54% Similarity=0.978 Sum_probs=63.9
Q ss_pred CCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 16 NPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 16 ~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
+|+||||+++++++.|+|+||||.+.||+||+||++||+|+.+++ |+|+.||||+|+|||||||++.+
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-----Y~g~~fhRvi~~f~iQgGd~~~~ 70 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-----YKGSTFHRVIPSFMCQAGDFTNH 70 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCC-----STTCBEEEEETTTEEEECCTTTS
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCcc-----CcCCEEEEEECCCEEEeCCccCC
Confidence 789999999999999999999999999999999999999876655 99999999999999999999753
No 11
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.94 E-value=6e-27 Score=171.69 Aligned_cols=74 Identities=59% Similarity=1.115 Sum_probs=67.9
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCC---CCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRD---AVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~---~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+|+||||+++++++.|+|+||||.+.||+||+||++||+++++.+ ++++.|+|+.||||+|+|||||||++.+
T Consensus 14 ~~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~ 90 (370)
T 1ihg_A 14 SNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQ 90 (370)
T ss_dssp TSCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTS
T ss_pred CCCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCC
Confidence 3899999999999999999999999999999999999999977653 4566799999999999999999999854
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.94 E-value=5.1e-27 Score=159.21 Aligned_cols=72 Identities=46% Similarity=0.859 Sum_probs=66.2
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+..+++||||+++++++.|+|+||||.+.||+||+||++||+|+.+++ |+|+.||||+|+|||||||+..+
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 78 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFG-----YKDSIFHRVIQNFMIQGGDFTNF 78 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCC-----STTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcc-----cCCCEEEEEECCCEEecCCccCC
Confidence 4577899999999999999999999999999999999999998876655 99999999999999999997544
No 13
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.94 E-value=7.9e-27 Score=158.20 Aligned_cols=71 Identities=52% Similarity=0.950 Sum_probs=64.4
Q ss_pred cCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 13 NQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 13 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
...+|+||||+++++++.|+|+||||.+.||+||+||++||+++.+++ |+|+.||||+|+|||||||++.+
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 77 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-----YHNCCFHRVIPQFMCQGGDFVKG 77 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-----STTCBEEEEETTTEEEECCTTTS
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCce-----ECCCEEEEEECCCEEEcCCccCC
Confidence 466899999999999999999999999999999999999999865544 99999999999999999999754
No 14
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.94 E-value=1.1e-26 Score=157.57 Aligned_cols=71 Identities=52% Similarity=0.870 Sum_probs=64.4
Q ss_pred cCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 13 NQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 13 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
...+|+||||+++++++.|+|+||||.+.||+||+||++||+++.++. |+|+.||||+|+|||||||++.+
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 78 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-----FKGSSFHRIIPQFMCQGGDFTNH 78 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCC-----STTCBEEEEETTTEEEECCTTTS
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCce-----ecCCEEEEeeCCCEEEeCCcCCC
Confidence 456899999999999999999999999999999999999998766544 99999999999999999999854
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=158.61 Aligned_cols=71 Identities=56% Similarity=0.942 Sum_probs=65.3
Q ss_pred cCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 13 NQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 13 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
+..+|+||||+++++++.|+|+||||.+.||+||+||++||+++++.+ |+|+.||||+|+|||||||++.+
T Consensus 19 ~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 89 (184)
T 3rdd_A 19 GMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-----YKGSCFHRIIPGFMCQGGDFTRH 89 (184)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-----STTCBCCEEETTTEEEECCTTTS
T ss_pred cCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-----cCCCEEEEccCCcEEEeCCCCCC
Confidence 457899999999999999999999999999999999999999888766 99999999999999999997654
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.94 E-value=2.2e-26 Score=158.51 Aligned_cols=71 Identities=38% Similarity=0.815 Sum_probs=64.7
Q ss_pred cCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 13 NQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 13 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
...+|+||||+++++++.|+|+||||.+.||+||+||++||+++.+.+ |+|+.||||+|+|||||||+..+
T Consensus 24 ~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 94 (193)
T 3k2c_A 24 KEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-----YKGSTFHRIIPGFMVQGGDYTAH 94 (193)
T ss_dssp --CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSS-----STTCBEEEEETTTEEEECCTTTS
T ss_pred ccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCc-----ccCCEEEEEeCCCEEEeCCCCCC
Confidence 356899999999999999999999999999999999999999877665 99999999999999999997654
No 17
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.94 E-value=1e-26 Score=159.01 Aligned_cols=72 Identities=47% Similarity=0.827 Sum_probs=65.8
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+..+++||||++++++++|+|+||||.+.||+||+||++||+++++.. |+|+.||||+|+|||||||++.+
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 79 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-----YKDSKFHRVIKDFMIQGGDFTRG 79 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCC-----STTCBCCEEETTTEEEECCTTTS
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCe-----EcCCEEEEeeCCCeEEECCCCCC
Confidence 3577899999999999999999999999999999999999999865433 99999999999999999999854
No 18
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.93 E-value=2.3e-26 Score=157.78 Aligned_cols=72 Identities=49% Similarity=0.856 Sum_probs=65.3
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
....+++||||+++++++.|+|+||||.+.||+||+||++||+|+.+++ |+|+.||||+|+|||||||+..+
T Consensus 11 ~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-----Y~g~~FhRvi~~f~iQgGd~~~~ 82 (188)
T 3ich_A 11 GPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-----YKNSKFHRVIKDFMIQGGDFTRG 82 (188)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-----STTCBCCEEETTTEEEECCTTTS
T ss_pred CCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCcc-----ccCCEEEEEECCCEEEcCCccCC
Confidence 3455789999999999999999999999999999999999999876655 99999999999999999997543
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.93 E-value=3.1e-26 Score=161.66 Aligned_cols=78 Identities=33% Similarity=0.581 Sum_probs=66.1
Q ss_pred hhccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccC------------CCCcccccCCeEEEEecC
Q psy8675 10 QLRNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRR------------DAVPIGFKGASFHRVIKD 77 (92)
Q Consensus 10 ~~~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~------------~~~~~~Y~g~~f~rvi~~ 77 (92)
.++...+|+||||++++++..|+|+||||.+.||+||+||++||+++..+ .+++++|+|+.||||+|+
T Consensus 8 ~p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~ 87 (234)
T 2ose_A 8 LPNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHN 87 (234)
T ss_dssp CCCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETT
T ss_pred cCcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECC
Confidence 44567789999999999999999999999999999999999999986210 033466999999999999
Q ss_pred cEEEecCCCC
Q psy8675 78 FMIQGGDFVN 87 (92)
Q Consensus 78 ~~iqgGD~~~ 87 (92)
|||||||+..
T Consensus 88 FmiQgGd~~~ 97 (234)
T 2ose_A 88 NYIVSGDIYN 97 (234)
T ss_dssp TEEEECCCC-
T ss_pred CEEEcCCccC
Confidence 9999999754
No 20
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.92 E-value=4.8e-25 Score=149.39 Aligned_cols=68 Identities=44% Similarity=0.895 Sum_probs=58.6
Q ss_pred CCCeEEEEEeeC--CeE---eeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVG--ATE---IGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~--~~~---~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+ +|||||+++ +.. .|+|+||||.+.||+||+||++||+++.+.+ |+|+.||||+|+|||||||+..+
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-----Y~g~~fhRvi~~f~iQgGd~~~~ 74 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEG-----YRESTFHRIIPNFMIQGGDFTRG 74 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTS-----STTCBCCEEETTTEEEECC----
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcc-----cCCCEEEEEeCCCEEEeCCcCCC
Confidence 35 899999998 654 4999999999999999999999999877655 99999999999999999996543
No 21
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.89 E-value=2.7e-23 Score=139.97 Aligned_cols=62 Identities=35% Similarity=0.695 Sum_probs=57.4
Q ss_pred CCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 14 QNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 14 ~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..+++|+|+++ .|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++..
T Consensus 2 ~~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 63 (166)
T 1v9t_A 2 KGDPHVLLTTS-----AGNIELELDKQKAPVSVQNFVDYVNSGF--------YNNTTFHRVIPGFMIQGGGFTEQ 63 (166)
T ss_dssp CCSCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBEEEEETTTEEEESSBCTT
T ss_pred CCCeEEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHhccCC--------CCCCEEEEEECCcEEEcCCcCcC
Confidence 45789999954 9999999999999999999999999887 99999999999999999999865
No 22
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=139.25 Aligned_cols=63 Identities=32% Similarity=0.652 Sum_probs=58.2
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 87 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~ 87 (92)
..+.+++|+|+++ .|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++.
T Consensus 20 ~~~~~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~ 82 (185)
T 2hq6_A 20 EPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGDPTG 82 (185)
T ss_dssp CCCCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHTTT--------TTTEECCEEETTTEEEECCTTS
T ss_pred CCCCCCEEEEEeC-----CccEEEEEeCCCCcHHHHHHHHHhhcCc--------cCCCEEEEEECCCEEEcCCCCC
Confidence 3466789999965 8999999999999999999999999888 9999999999999999999974
No 23
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.87 E-value=7.9e-23 Score=137.65 Aligned_cols=60 Identities=40% Similarity=0.619 Sum_probs=55.3
Q ss_pred CCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 16 NPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 16 ~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
++.|.|+ |+.|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++.+
T Consensus 3 ~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 62 (167)
T 3s6m_A 3 GSMVELH-----TNHGVIKLELDEAKAPKTVENFLNYVKKGH--------YDGTIFHRVINGFMIQGGGFEPG 62 (167)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHHTT--------TTTEECCEEETTTEEEESSEETT
T ss_pred CcEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHhhhcc--------cCCCEeEEecCCcEEEeccccCC
Confidence 5678887 459999999999999999999999999988 99999999999999999998764
No 24
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.87 E-value=4.1e-22 Score=137.01 Aligned_cols=69 Identities=35% Similarity=0.516 Sum_probs=57.9
Q ss_pred CCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCC-------CCcccccCCeEEEEecCcEEEecCCC
Q psy8675 14 QNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRD-------AVPIGFKGASFHRVIKDFMIQGGDFV 86 (92)
Q Consensus 14 ~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~-------~~~~~Y~g~~f~rvi~~~~iqgGD~~ 86 (92)
..++.|.|+ ++.|+|+||||.+.||+||+||++||+|+++.. .+...|+|+.||||+|+|||||||+.
T Consensus 21 ~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 21 LATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred CCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 445677777 459999999999999999999999999877532 12345999999999999999999986
Q ss_pred C
Q psy8675 87 N 87 (92)
Q Consensus 87 ~ 87 (92)
.
T Consensus 96 g 96 (191)
T 1w74_A 96 G 96 (191)
T ss_dssp S
T ss_pred C
Confidence 5
No 25
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.87 E-value=3.5e-22 Score=140.79 Aligned_cols=64 Identities=34% Similarity=0.651 Sum_probs=58.3
Q ss_pred ccCCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 12 RNQNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 12 ~~~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..+.++.|+|+++ +|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++..
T Consensus 17 ~p~~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g~--------Ydgt~FhRVi~~FmiQgGdp~~~ 80 (232)
T 3bkp_A 17 QGSTRGKVVLHTS-----LGDLDVELWARECPLACRNFVQLCLEGY--------YVNTIFHRVVKDFIVQGGDPTGT 80 (232)
T ss_dssp CCSCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHHTT--------TTTCBEEEEETTTEEEECCTTSS
T ss_pred cCCCCCEEEEEEC-----CCcEEEEEcCCCCcHHHHHHHHHhhcCc--------cCCCEEEEEeCCCEEEcCCCCCC
Confidence 3456788999965 8999999999999999999999999888 99999999999999999999753
No 26
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.86 E-value=4.5e-22 Score=134.08 Aligned_cols=61 Identities=41% Similarity=0.833 Sum_probs=56.2
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.++.|.|+++ .|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++..
T Consensus 10 ~~~~v~l~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~~ 70 (166)
T 2x7k_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRGY--------YNGTKFHRIIKDFMIQGGDPTGT 70 (166)
T ss_dssp CCSEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHTT--------TTTEECCEEETTTEEEECCTTSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCCHHHHHHHHHHhcCC--------CCCCEEEEEECCCEEEcCCCCCC
Confidence 4678999855 9999999999999999999999999887 99999999999999999998743
No 27
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.86 E-value=4.4e-22 Score=137.31 Aligned_cols=62 Identities=34% Similarity=0.572 Sum_probs=56.7
Q ss_pred CCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 14 QNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 14 ~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..++.|.|+++ .|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||+++.
T Consensus 36 ~~~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Y~g~~FhRVi~~f~iQgGd~~~~ 97 (196)
T 2b71_A 36 TERGYITIYTN-----LGDFEVELYWYHSPKTCLNFYTLCEMGF--------YDNTIFHRVIPNFVIQGGDPTGT 97 (196)
T ss_dssp HHSCEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEEEEEEETTTEEEEEETTSS
T ss_pred CCCcEEEEEeC-----CCCEEEEEeCCCCcHHHHHHHHHhhcCC--------cCCCEEEEEeCCcEEEcCCCCCC
Confidence 34678999855 9999999999999999999999999888 99999999999999999999743
No 28
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.86 E-value=9.3e-22 Score=131.89 Aligned_cols=60 Identities=32% Similarity=0.499 Sum_probs=54.4
Q ss_pred CCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 16 NPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 16 ~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.+.|.++ ++.|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++..
T Consensus 5 ~~~v~~~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~~ 64 (160)
T 2fu0_A 5 PKSAIIY-----TTMGDIHISLFYKECKKTVQNFSVHSINGY--------YNNCIFHRVIKHFMVQTGDPSGD 64 (160)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTSS
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhccCc--------cCCCEEEEEECCCEEEeCCcCCC
Confidence 4567777 459999999999999999999999999988 99999999999999999998743
No 29
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.85 E-value=5.8e-22 Score=133.20 Aligned_cols=52 Identities=42% Similarity=0.853 Sum_probs=49.5
Q ss_pred eEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCC
Q psy8675 28 TEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 87 (92)
Q Consensus 28 ~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~ 87 (92)
|+.|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~ 57 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCREGF--------YNNTIFHRVINGFMIQGGGFEP 57 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEECCEEETTTEEEESSEET
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHhcCC--------CCCCEEEEEeCCceEecCCccc
Confidence 569999999999999999999999999887 9999999999999999999874
No 30
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.85 E-value=1.5e-21 Score=135.23 Aligned_cols=61 Identities=41% Similarity=0.833 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
.++.|.|+++ +|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||++..
T Consensus 10 ~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g~--------Ydg~~FhRVi~~F~iQgGd~~~~ 70 (203)
T 2k7n_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRGY--------YNGTKFHRIIKDFMIQGGDPTGT 70 (203)
T ss_dssp CCSEEEEEES-----SCEEEEEECTTTCTTHHHHHHHHHHHTC--------GGGCEEEEEETTTEEEEECSSSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCcHHHHHHHHHHhcCc--------cCCCEEEEEeCCcEEEcCCCCCC
Confidence 4678999855 9999999999999999999999999887 99999999999999999999743
No 31
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.85 E-value=1.8e-21 Score=132.23 Aligned_cols=60 Identities=37% Similarity=0.626 Sum_probs=53.6
Q ss_pred CCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 16 NPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 16 ~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
...|.++ +..|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||+...
T Consensus 21 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 80 (176)
T 2a2n_A 21 SDSAIIH-----TSMGDIHTKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGDPTGT 80 (176)
T ss_dssp CSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTSS
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhhcCc--------cCCCEEEEEECCcEEEccCCCCC
Confidence 3455555 569999999999999999999999999888 99999999999999999998743
No 32
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.85 E-value=1.7e-21 Score=133.33 Aligned_cols=62 Identities=35% Similarity=0.571 Sum_probs=54.1
Q ss_pred CCCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 14 QNNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 14 ~~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
+....|.++ +..|+|+||||.+.||+||+||++||++++ |+|+.||||+|+|||||||++..
T Consensus 14 ~~~~~v~i~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 75 (185)
T 2poe_A 14 LYFQGVRII-----TNYGDLKFELFCSQCPKACKNFLALSASGY--------YKNTIFHKNIKGFIIQGGDPTGT 75 (185)
T ss_dssp -CCCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTEEEEEECTTSEEEEEETTSS
T ss_pred CCceEEEEE-----ecCccEEEEEeCCCCcHHHHHHHHHhccCC--------CCCCEEEEEECCCEEEcCCCCCC
Confidence 334455555 569999999999999999999999999988 99999999999999999999743
No 33
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.85 E-value=1.7e-21 Score=130.68 Aligned_cols=53 Identities=42% Similarity=0.839 Sum_probs=50.2
Q ss_pred eEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 28 TEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 28 ~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
|+.|+|+||||.+.||+||+||++||++++ |+|+.||||+|+|||||||+++.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~~ 59 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASNY--------YNGCIFHRNIKGFMVQTGDPTGT 59 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTSS
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhcc--------cCCCEEEEEECCCEEecCCCCCC
Confidence 669999999999999999999999999988 99999999999999999998743
No 34
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.85 E-value=2.8e-21 Score=133.43 Aligned_cols=60 Identities=40% Similarity=0.759 Sum_probs=53.6
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 87 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~ 87 (92)
....|.|+ |..|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||||++.
T Consensus 18 ~~~~v~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Ydg~~FhRVi~~f~iQgGd~~~ 77 (197)
T 1zkc_A 18 GSGYVRLH-----TNKGDLNLELHCDLTPKTCENFIRLCKKHY--------YDGTIFHRSIRNFVIQGGDPTG 77 (197)
T ss_dssp SCEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEEEEEEETTTEEEECCTTS
T ss_pred CCcEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHHhcCC--------CCCCEEEEEeCCCEEEcCCCCC
Confidence 34455555 559999999999999999999999999888 9999999999999999999975
No 35
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.83 E-value=1.2e-20 Score=130.41 Aligned_cols=60 Identities=33% Similarity=0.661 Sum_probs=52.7
Q ss_pred CCCeEEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEec-----CCCC
Q psy8675 15 NNPVVFFDISVGATEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGG-----DFVN 87 (92)
Q Consensus 15 ~~~~v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgG-----D~~~ 87 (92)
.+..|.|+ |+.|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||| |+++
T Consensus 5 ~~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Ydg~~FhRvi~~f~iQgG~~~~~Dp~~ 69 (201)
T 3bo7_A 5 KKGYLRIV-----TTQGSLNIELHADMAPRACDSFLRLCAVKY--------FDDTIFHRCIRNFMIQGGRAELRQPSK 69 (201)
T ss_dssp CCEEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBEEEEETTTEEEECCGGGCCC--
T ss_pred CceEEEEE-----eCCCCEEEEEcCCCCcHHHHHHHHHHhcCc--------cCCCEEEEeeCCCEEEcCcccccCCCC
Confidence 34566666 459999999999999999999999999888 999999999999999999 9874
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.79 E-value=3.4e-20 Score=137.78 Aligned_cols=66 Identities=21% Similarity=0.297 Sum_probs=57.3
Q ss_pred CCCCeEEEEEeeCC---eEeeeEEEEecCCCChhhHHHHHHhhcCcccCCCCcccccCCeEEEEecCcEEEecCCCCC
Q psy8675 14 QNNPVVFFDISVGA---TEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 88 (92)
Q Consensus 14 ~~~~~v~~di~~~~---~~~G~i~ieL~~~~~P~t~~nF~~l~~g~~~~~~~~~~Y~g~~f~rvi~~~~iqgGD~~~~ 88 (92)
..+..|.|++++.+ +..|+|+||||.+.||+||+||++||+.++ |+|+.|||| ++|||||||+++.
T Consensus 168 ~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~Gf--------YdGt~FHRV-~gFmIQgGDp~g~ 236 (369)
T 3rfy_A 168 KGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHF--------YDGMEIQRS-DGFVVQTGDPEGP 236 (369)
T ss_dssp CSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTT--------TTTEECEEE-EEEEECCCCCCCC
T ss_pred CCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCC--------cCCCeeeee-CCeeEecCCCCCC
Confidence 44556667766543 368999999999999999999999999888 999999999 9999999999863
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=89.96 E-value=0.44 Score=32.24 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=26.4
Q ss_pred EEEEEeeCCeEeeeEEEEecCCCChhhHHHHHHhh
Q psy8675 19 VFFDISVGATEIGRMIFELFADVVPKTSENFRQFC 53 (92)
Q Consensus 19 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 53 (92)
.|+.|++..... .++.+|..+.||+||+-|.++-
T Consensus 22 r~i~itl~~~g~-~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGV-TCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTE-EEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCe-EEEEEEccccChHHHHHHHHhC
Confidence 578888764221 4788999999999999998753
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=88.67 E-value=0.48 Score=30.92 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=23.9
Q ss_pred EEEeeCCeEeeeEEEEecCCCChhhHHHHHHh
Q psy8675 21 FDISVGATEIGRMIFELFADVVPKTSENFRQF 52 (92)
Q Consensus 21 ~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l 52 (92)
+.+++++ ..++++|+.+.+|+||+-|+++
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~ 60 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADA 60 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHT
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHh
Confidence 5555565 5799999999999999999865
No 39
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=26.33 E-value=97 Score=17.71 Aligned_cols=34 Identities=9% Similarity=0.128 Sum_probs=22.4
Q ss_pred eEEEEEe-eCCeEeeeEEEEecCCCChhhHHHHHHhh
Q psy8675 18 VVFFDIS-VGATEIGRMIFELFADVVPKTSENFRQFC 53 (92)
Q Consensus 18 ~v~~di~-~~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 53 (92)
.++=.+. +.+.+.|+++++|-++ +...+.+++.-
T Consensus 53 Il~g~i~~i~~~~~G~L~v~l~G~--~~~~~~ai~~L 87 (100)
T 2qsw_A 53 IIQGNIQQTKQGAVGSLYIQLLGE--EQNILAAIEGL 87 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred EEEeeceEcCCeeEEEEEEEEECC--HHHHHHHHHHH
Confidence 3444444 5778999999999875 33455555443
No 40
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=24.52 E-value=1.1e+02 Score=17.56 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=22.3
Q ss_pred eEEEEEe-eCCeEeeeEEEEecCCCChhhHHHHHHhh
Q psy8675 18 VVFFDIS-VGATEIGRMIFELFADVVPKTSENFRQFC 53 (92)
Q Consensus 18 ~v~~di~-~~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 53 (92)
.++=.++ +.+.+.|+++++|-++ +...+.+++.-
T Consensus 53 Il~g~i~~i~~~~~G~L~v~l~G~--~~~~~~ai~~L 87 (101)
T 2qrr_A 53 ILSSDLDYAGGVKFGMMVAELFGN--EQDDSAAIEYL 87 (101)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred EEEeeeeEcCCeeEEEEEEEEeCC--HHHHHHHHHHH
Confidence 3444443 5778999999999875 33455555443
No 41
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=20.66 E-value=86 Score=18.30 Aligned_cols=34 Identities=12% Similarity=0.312 Sum_probs=22.6
Q ss_pred eEEEEEe-eCCeEeeeEEEEecCCCChhhHHHHHHhh
Q psy8675 18 VVFFDIS-VGATEIGRMIFELFADVVPKTSENFRQFC 53 (92)
Q Consensus 18 ~v~~di~-~~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 53 (92)
.++=.|+ +++.+.|+++++|-++ +...+..++.-
T Consensus 51 IL~g~I~~i~~~~~G~L~v~l~G~--~~~~~~ai~~L 85 (106)
T 3dhx_A 51 IISAQMDYAGGVKFGIMLTEMHGT--QQDTQAAIAWL 85 (106)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred EEEEEeEEECCeeEEEEEEEEeCC--HHHHHHHHHHH
Confidence 4444554 5788999999999985 33455544443
Done!