Query psy8678
Match_columns 394
No_of_seqs 254 out of 1532
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:56:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z70_X C-alpha-formyglycine-ge 100.0 1.7E-66 5.9E-71 500.1 20.2 289 9-347 13-301 (311)
2 2q17_A Formylglycine generatin 100.0 5.4E-64 1.9E-68 489.5 17.3 286 12-348 55-342 (346)
3 1y4j_A Sulfatase modifying fac 100.0 1.4E-60 4.8E-65 453.4 20.2 268 13-347 2-272 (284)
4 2y3c_A Treponema denticola var 100.0 2.5E-52 8.7E-57 399.1 11.0 258 14-342 29-293 (294)
5 1yu0_A Major tropism determina 100.0 2.7E-31 9.3E-36 252.6 8.7 144 175-343 228-377 (381)
6 2y3c_A Treponema denticola var 99.2 1.4E-11 4.9E-16 117.0 5.8 45 345-392 249-293 (294)
7 1z70_X C-alpha-formyglycine-ge 98.9 1.1E-09 3.8E-14 104.7 4.3 54 109-162 124-177 (311)
8 2q17_A Formylglycine generatin 98.8 1.9E-09 6.7E-14 104.5 3.8 53 111-163 165-217 (346)
9 1y4j_A Sulfatase modifying fac 98.8 2.4E-09 8.3E-14 101.0 4.1 52 111-162 110-161 (284)
10 1yu0_A Major tropism determina 98.5 5.1E-09 1.8E-13 99.9 -2.4 38 114-151 228-265 (381)
11 3k7b_A Protein A33; C-type lec 72.1 2.2 7.4E-05 32.7 2.5 21 182-202 27-47 (96)
12 1o7b_T Tumor necrosis factor-i 56.8 9.6 0.00033 29.2 3.6 34 182-215 13-46 (98)
13 2jcq_A CD44 antigen; sugar-bin 31.2 54 0.0019 27.1 4.4 39 182-220 25-63 (154)
14 1f00_I Intimin; immunoglobulin 29.9 23 0.0008 32.5 2.2 22 181-202 192-213 (282)
15 3ff9_A Killer cell lectin-like 22.3 37 0.0013 25.7 1.8 20 182-201 20-39 (115)
16 3ff7_C Killer cell lectin-like 22.2 33 0.0011 25.8 1.5 28 182-209 19-49 (112)
17 1dv8_A Asialoglycoprotein rece 22.2 37 0.0013 26.1 1.8 29 182-210 19-50 (128)
18 1rdl_1 SUB-MBP-C, mannose-bind 21.6 39 0.0013 25.4 1.8 29 182-210 10-41 (113)
19 1byf_A TC14, protein (polyandr 21.3 52 0.0018 25.1 2.5 29 182-210 11-44 (125)
20 3g8k_A Lectin-related NK cell 20.7 41 0.0014 25.9 1.8 29 182-210 25-56 (130)
21 2msb_A Mannose-binding protein 20.2 39 0.0013 25.5 1.5 29 182-210 12-43 (115)
22 2ox9_A Collectin placenta 1; C 20.0 45 0.0015 26.1 1.9 30 181-210 22-54 (140)
No 1
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple sulfatase deficiency, cysteine sulfe oxidoreductase; HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7 PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X* 2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X*
Probab=100.00 E-value=1.7e-66 Score=500.12 Aligned_cols=289 Identities=64% Similarity=1.202 Sum_probs=237.1
Q ss_pred CCCCCCcEEeCCeeeEccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccH
Q psy8678 9 VERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSE 88 (394)
Q Consensus 9 ~~~~~~mv~IpgG~f~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~ 88 (394)
.....+||.||||+|+||++++.+..|+|.|.|+|+|++|+|++|||||+||++||++++|.+.+++.+++++++..+++
T Consensus 13 ~~~~~~mv~IpgG~f~mG~~~~~~~~d~E~P~h~V~v~~F~i~k~eVTn~ey~~Fv~~~gy~~~~e~~g~~~~~~~~~~~ 92 (311)
T 1z70_X 13 QLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSE 92 (311)
T ss_dssp -CCTTCEEEECCEEEEESCSSCSSGGGTCCCCEEEEECCEEEESSCCBHHHHHHHHHHHCCCCHHHHHTEEEEEGGGCC-
T ss_pred CCCCCCeEEECCeEEEcCCCCcCCccccCCCceEEEECCEEEECeeECHHHHHHHHHhcCCcccccccCccccccccCCh
Confidence 34568899999999999998777778899999999999999999999999999999999999998888888888777665
Q ss_pred HHHHhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCc
Q psy8678 89 EERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGI 168 (394)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~ 168 (394)
+....+.+ +.....||.. .+ + ..|..+.++
T Consensus 93 ~~~~~~~~------------------------------~~~~~~~w~~---~~--------~---------~~w~~~~g~ 122 (311)
T 1z70_X 93 QVKTNIQQ------------------------------AVAAAPWWLP---VK--------G---------ANWRHPEGP 122 (311)
T ss_dssp ---------------------------------------CCSSTTEEE---EE--------T---------CBTTBTTST
T ss_pred hhhhhhcc------------------------------ccccccceec---cC--------C---------cccccccCC
Confidence 54322211 0000112100 00 1 356666666
Q ss_pred CCccccccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCccccccccCCCCCCCCCCCC
Q psy8678 169 DSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADG 248 (394)
Q Consensus 169 ~~~~~~~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~~~~~~~~~~~~~~g 248 (394)
.+......++||++|||+||.+||+|+|+|||||+||||||||+...+.||||+...+.+...+|+|++.++..+...++
T Consensus 123 ~~~~~~~~~~PVv~VSw~dA~Ayc~W~g~RLPTEaEWEyAAr~g~~~~~y~~G~~~~~~~~~~~n~w~~~~~~~n~~~~~ 202 (311)
T 1z70_X 123 DSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDG 202 (311)
T ss_dssp TCCSTTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSCSSGGGCCCSCCCCEETTTEECCTTS
T ss_pred CcccccccCCCcccCCHHHHHHHHHHhCCCCCCHHHHHHHHhCCCCCCccCCCCcCCccchhhhcccccccccccccccC
Confidence 55555678999999999999999999999999999999999998888899999988777777889998877766667778
Q ss_pred CCccccCcCCCCCcccccccccCHHHhccccccCCCCCCCCCCCCCCCCCCCeEEeCccccCCccccccceeccccCCCC
Q psy8678 249 YLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTP 328 (394)
Q Consensus 249 ~~~~~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~~~~~~~~~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~~~ 328 (394)
+..+.|||++++|+||||||+|||||||.|+|.+++...+..+|.++..+..+|+|||||.+...+|..+|++.|....|
T Consensus 203 ~~~t~pVg~~~~n~~GlyDm~GNVwEW~~d~y~~y~~~~~~~~p~~~~~~~~rVlRGGSw~~~~~~~~~~R~a~R~~~~p 282 (311)
T 1z70_X 203 FQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTP 282 (311)
T ss_dssp CSSCCCTTCSCCCTTSCCSSSSSSEEEEEEECCSCCCCSCEESCCCCSCCSSEEEESCCTTCBTTTBCCCSTTCCEEECT
T ss_pred CcccccccccCCCCcccCCCCcCHHHHhCCcCccccCCCcccCCCCCCCCCeEEEeCCCCCCChhhhhheeeeeecCCCC
Confidence 88999999999999999999999999999999997666666778777788999999999999888887789999999999
Q ss_pred CCCCCCCCccccccCCCCC
Q psy8678 329 DSSAGNLGFRCAADKGPTT 347 (394)
Q Consensus 329 ~~~~~~iGFR~v~~~~~~~ 347 (394)
+.+..++|||||+++.+.+
T Consensus 283 ~~~~~~~GFR~v~~~~~~~ 301 (311)
T 1z70_X 283 DSSASNLGFRCAADRLPTM 301 (311)
T ss_dssp TCCBTTEECCCEESSCC--
T ss_pred CcccCCEEEEEEEECCCcc
Confidence 9999999999999986655
No 2
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown function; 2.10A {Streptomyces coelicolor}
Probab=100.00 E-value=5.4e-64 Score=489.50 Aligned_cols=286 Identities=52% Similarity=0.942 Sum_probs=226.4
Q ss_pred CCCcEEeCCeeeEccCCCC-CCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccHHH
Q psy8678 12 YKDMVLLPGDTFRMGTNKP-ILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEE 90 (394)
Q Consensus 12 ~~~mv~IpgG~f~mG~~~~-~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~~~ 90 (394)
..+||.||||+|+||++.. .+..|+|.|.|+|+|++|+|++|||||+||++||+++||.+.+++.+++.++...++++.
T Consensus 55 ~~~mV~IpgG~f~mG~~~~~~~~~d~E~P~h~V~v~~F~i~k~eVTn~ey~~Fv~~~gy~~~ae~~~~~~~~~~~~~~~~ 134 (346)
T 2q17_A 55 TRGQVRLPGGEFAMGDAFGEGYPADGETPVHTVRLRPFHIDETAVTNARFAAFVKATGHVTDAERFGSSAVFHLVVAAPD 134 (346)
T ss_dssp CTTEEEECCEEEEESCSSCCSCGGGCCCSCEEEEECCEEEESSCCBHHHHHHHHHHHCCCCHHHHHSEEEEEGGGCCSCG
T ss_pred cCCeEEECCcEEEeCCCCcccccccCCCCceEEEECCEEEECeeecHHHHHHHHHhcCCcchhhhcCcchhhhhccCccc
Confidence 4789999999999999744 466789999999999999999999999999999999999988776665544422221100
Q ss_pred HHhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCcCC
Q psy8678 91 RAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDS 170 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~~~ 170 (394)
.. +|-. .....||.. .. + .+|+.+.++.+
T Consensus 135 ~~-------------------------~~~~------~~~~~~W~~---~~--------~---------~~w~~~~~~~s 163 (346)
T 2q17_A 135 AD-------------------------VLGS------AAGAPWWIN---VR--------G---------AHWRRPEGARS 163 (346)
T ss_dssp GG-------------------------EEEE------CSSCTTEEE---EE--------T---------CBTTBTTSTTC
T ss_pred cc-------------------------cccc------cccccceee---cC--------C---------ccccccCCCCc
Confidence 00 0000 001112200 00 1 34555655555
Q ss_pred ccccccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCccccccccCCCCCCCCCCCCCC
Q psy8678 171 TIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYL 250 (394)
Q Consensus 171 ~~~~~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~~~~~~~~~~~~~~g~~ 250 (394)
......++||++|||+||.+||+|+|+|||||+||||||||+...+.||||+...+.+..++|+|++.++..+...+++.
T Consensus 164 ~~~~~~~~PVv~VSw~dA~ayc~W~g~RLPTEAEWEyAARgg~~~~~ypwG~~~~~~~~~~an~~~~~~~~~~~~~~g~~ 243 (346)
T 2q17_A 164 DITGRPNHPVVHVSWNDATAYARWAGKRLPTEAEWEYAARGGLAGRRYAWGDELTPGGRWRCNIWQGRFPHVNTAEDGHL 243 (346)
T ss_dssp CCTTCTTSBCCSCCHHHHHHHHHHHTCBCCCHHHHHHHHHTTCSSCSBTTBSCSSGGGCCCSBCCCSSTTTCCCCTTSCS
T ss_pred ccccCCCCCcccCCHHHHHHHHHHhCCCCcCHHHHHHHhhcCCCCCcCCCCCcCCcccccccceecccccccCccccCCc
Confidence 54567899999999999999999999999999999999999888888999998877777789999998887777788888
Q ss_pred ccccCcCCCCCcccccccccCHHHhccccccCCCCC-CCCCCCCCCCCCCCeEEeCccccCCccccccceeccccCCCCC
Q psy8678 251 STAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHP-APSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPD 329 (394)
Q Consensus 251 ~~~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~-~~~~~~~~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~~~~ 329 (394)
.++|||++++|+||||||+|||||||.|+|.+++.. ....++.++..+..+|+|||||.+...+|..+|++.|....++
T Consensus 244 ~t~pVg~~~pN~~GlyDM~GNVwEWt~d~y~~~~~~~~~~~~p~g~~~~~~rVlRGGSw~~~~~~~~~~R~a~R~~~~p~ 323 (346)
T 2q17_A 244 STAPVKSYRPNGHGLWNTAGNVWEWCSDWFSPTYYAESPTVDPHGPGTGAARVLRGGSYLCHDSYCNRYRVAARSSNTPD 323 (346)
T ss_dssp SCCCSSCSCBCTTSCBCSSBSSEEEEEEECCTTHHHHCCSBSCCCCSCCSSEEEESCCTTCCTTTCCTTSTTCCEEECTT
T ss_pred ceeecCccCCCCcccCCCCCCHHHhcCccCccCccccccccCCCCCccCceeEEEeCCCcCCccccccccceeccCcCCC
Confidence 999999999999999999999999999999987542 2345666677889999999999999888867899999999999
Q ss_pred CCCCCCCccccccCCCCCC
Q psy8678 330 SSAGNLGFRCAADKGPTTG 348 (394)
Q Consensus 330 ~~~~~iGFR~v~~~~~~~~ 348 (394)
.+..++|||||+++.++++
T Consensus 324 ~~~~~~GFR~v~~~~~~~~ 342 (346)
T 2q17_A 324 SSSGNLGFRCANDADLTSG 342 (346)
T ss_dssp CCBTTEECCCEEEC-----
T ss_pred CccCCEEEEEEEECCCCCC
Confidence 9999999999999876554
No 3
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple sulfatase deficiency, HO DUF323, sugar binding protein; HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7
Probab=100.00 E-value=1.4e-60 Score=453.39 Aligned_cols=268 Identities=48% Similarity=0.919 Sum_probs=212.6
Q ss_pred CCcEEeCCeeeEccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccHHHHH
Q psy8678 13 KDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERA 92 (394)
Q Consensus 13 ~~mv~IpgG~f~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (394)
++||.||||+|+||++.+ ...++|.|.|+|+|++|+|++|||||+||++||++++|++.+++.+..+++...++++.+.
T Consensus 2 ~~mV~IpgG~f~mG~~~~-~~~d~E~P~h~V~v~~F~i~~~eVTn~ey~~Fv~~~gy~~~a~~~gw~~~~~~~~~~~~~~ 80 (284)
T 1y4j_A 2 TSMVQLQGGRFLMGTNSP-DSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVSDELRN 80 (284)
T ss_dssp CCEEEECCEEEEESCCCT-TCCTTCCSCEEEEECSEEEESSCCBHHHHHHHHHHHTCCCHHHHHTEEEEEGGGSCHHHHH
T ss_pred CCeEEECCceEEcCCCcc-cCCcccCCceEEEECCEEEECeeecHHHHHHHHHhcCCcchhhccCcceecccccChhhhc
Confidence 679999999999999754 3578999999999999999999999999999999999998887777777777766665543
Q ss_pred hhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCcCCcc
Q psy8678 93 KISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTI 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~~~~~ 172 (394)
.+.+ ++... .|| .+.. + ..|..+.++.+.+
T Consensus 81 ~~~~---------------------~~~~~---------~~w---~~~~--------~---------~~w~~~~gp~~~~ 110 (284)
T 1y4j_A 81 KATQ---------------------PMKSV---------LWW---LPVE--------K---------AFWRQPAGPGSGI 110 (284)
T ss_dssp CC-C---------------------CCCCB---------TTE---EEEE--------T---------CBTTBTTSTTCCS
T ss_pred cccc---------------------ccccc---------ccc---cccC--------c---------cceeccCCCcccc
Confidence 2211 11000 111 0000 0 3466666655555
Q ss_pred ccccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCccccccccCCCCCCCCCCCCCCcc
Q psy8678 173 EHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLST 252 (394)
Q Consensus 173 ~~~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~~~~~~~~~~~~~~g~~~~ 252 (394)
....++||++|||+||.+||+|+|+|||||+|||||||++...+.||||+...+. .+|.|++.++..+...+++..+
T Consensus 111 ~~~~~~PV~~VSw~dA~ayc~w~g~RLPTEaEWE~AAr~g~~~~~yp~g~~~~~~---~~n~~~~~~~~~~~~~~g~~~~ 187 (284)
T 1y4j_A 111 RERLEHPVLHVSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPN---RTNLWQGKFPKGDKAEDGFHGV 187 (284)
T ss_dssp TTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSSCCTT---SSCCCCSSTTTCCCCTTSCSSC
T ss_pred ccccCCCcccCCHHHHHHHHHHhCCCCCCHHHHHHHhccCCCCCccCCCCcCCcc---hhhhhccccccccccccCCcce
Confidence 5568999999999999999999999999999999999998888899999887653 4788888777666667788889
Q ss_pred ccCcCCCC-CcccccccccCHHHhccccccCCCCCCCCCCCCCCCCCCCeEEeCccccCCccc--cccceeccccCCCCC
Q psy8678 253 APVMSYKE-NKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQY--CYRHRCAARSQNTPD 329 (394)
Q Consensus 253 ~pVg~~~~-n~~GlyDM~GNV~EW~~d~y~~~~~~~~~~~~~~~~~g~~~v~rGGs~~~~~~~--~~~~r~~~r~~~~~~ 329 (394)
.|||++++ |+||||||+|||||||.|+|.+. .+..+|+|||||.+.... +...|++.|....|+
T Consensus 188 ~pVg~~~~~n~~GlyDm~GNVwEW~~d~y~~~-------------~~~~~v~RGGSw~~~~~~~~~~~~r~a~R~~~~p~ 254 (284)
T 1y4j_A 188 SPVNAFPAQNNYGLYDLLGNVWEWTASPYQAA-------------EQDMRVLRGASWIDTADGSANHRARVTTRMGNTPD 254 (284)
T ss_dssp CCTTSSCCSSTTCCCSCSSSSEEEEEEECSCG-------------GGCCEEEESCCTTCBTTSSSSSBCSTTCEEEECTT
T ss_pred eecCccCCCCCCccccCCcCHHHhhCCcccCC-------------CCCeeEEeCCCcCCCccccccceEEEeeccCCCCC
Confidence 99999999 99999999999999999998653 246899999999987652 223578888888899
Q ss_pred CCCCCCCccccccCCCCC
Q psy8678 330 SSAGNLGFRCAADKGPTT 347 (394)
Q Consensus 330 ~~~~~iGFR~v~~~~~~~ 347 (394)
.+..++|||||+++..+.
T Consensus 255 ~~~~~~GFR~v~~~~~~~ 272 (284)
T 1y4j_A 255 SASDNLGFRCAADAGRPP 272 (284)
T ss_dssp CCBTTEECCCEEEC----
T ss_pred CcCCCEEEEEEEECCCCC
Confidence 999999999999886544
No 4
>2y3c_A Treponema denticola variable protein 1; unknown function, periodontal disease; HET: CME; 1.40A {Treponema denticola}
Probab=100.00 E-value=2.5e-52 Score=399.05 Aligned_cols=258 Identities=28% Similarity=0.483 Sum_probs=176.5
Q ss_pred CcEEeCCeee--EccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccHHHH
Q psy8678 14 DMVLLPGDTF--RMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEER 91 (394)
Q Consensus 14 ~mv~IpgG~f--~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (394)
.|++||.|.| .||.++ ++|.|.|+|+|++|+|++|||||+||++||.+.... +..
T Consensus 29 ~f~~i~~g~~~~~~G~~~-----~~e~p~h~V~v~~F~i~k~eVTn~qy~~f~~~~p~~-----------~~~------- 85 (294)
T 2y3c_A 29 EFTMKGIAAVNAQLGHND-----YSINQPHTVSLSAYLIGETEVTQELWQAVMGNNPSH-----------FNG------- 85 (294)
T ss_dssp EEEEEEECCEEEEECCTT-----CTTBCSEEEEECCEEEESSCCBHHHHHHHHSCCCCS-----------CCS-------
T ss_pred eEEEEecCCcccccCCcc-----cccCCCeEEEECCEEeeceeecHHHHhhhhcCChhh-----------cCC-------
Confidence 3445554444 555432 478999999999999999999999999999653210 000
Q ss_pred HhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCcCCc
Q psy8678 92 AKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDST 171 (394)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~~~~ 171 (394)
.........++||++|||+||++||+|++.+...... |.+.++-... .|....
T Consensus 86 ---------------~p~~~~~~~~~PV~~VsW~dA~afc~wls~~~g~~p~--y~~~~~~~~~-----~~~~~~----- 138 (294)
T 2y3c_A 86 ---------------SPAVGETQGKRPVENVNWYQAIAFCNKLSIKLNLEPC--YTVNVGGNPV-----DFAALS----- 138 (294)
T ss_dssp ---------------CCCTTCCGGGSBCCSCCHHHHHHHHHHHHHHTTCCCS--EECEETTEEC-----CTTTCC-----
T ss_pred ---------------CCccccccccCCcCccCHHHHHHHHHHHHHhcCCCcc--cccccCCCcc-----eecccc-----
Confidence 0000112347899999999999999999775432200 0000000000 000000
Q ss_pred cccccCCCc-ccCCHHHHHHHHHH--cCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCcccccc-ccCCCCCCCCCCC
Q psy8678 172 IEHRMNHPV-VHVSWNDAVAYCTW--RGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANV-WQGEFPTNNTAAD 247 (394)
Q Consensus 172 ~~~~~~~Pv-~~Vsw~dA~~yc~w--lg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~-~~~~~~~~~~~~~ 247 (394)
....|. ..++|.+ +||+| .|+|||||+||||||||+. .|||++..... .++|+ |.+ .+
T Consensus 139 ---~~~~p~~~~~~~~~--a~~~~~~~g~RLPTEAEWEyAARgg~---~~~w~~~~~~~--~~~n~~w~~--------~~ 200 (294)
T 2y3c_A 139 ---FDQIPDSNNADWDK--AELDINKKGFRLPTEAEWEWAAKGGT---DDKWSGTNTEA--ELKNYAWYG--------SN 200 (294)
T ss_dssp ---GGGSCSSCCHHHHT--CEECTTSSSCBCCCHHHHHHHHHTTS---CCSSSSCSSHH--HHTTTCCCT--------TT
T ss_pred ---cccccccccccccc--cccccccCCccCCCHHHHHHHhcCCC---CCCCCCCCChh--hHhhccccc--------CC
Confidence 011121 2245655 67888 6899999999999999975 47888653321 12332 221 12
Q ss_pred CCCccccCcCCCCCcccccccccCHHHhccccccCCCCCC-CCCCCCCCCCCCCeEEeCccccCCccccccceeccccCC
Q psy8678 248 GYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPA-PSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQN 326 (394)
Q Consensus 248 g~~~~~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~~-~~~~~~~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~ 326 (394)
+...++|||+++||.||||||+|||||||.|+|.++.... ...++.++..+..+|+|||||.+....| |++.|...
T Consensus 201 ~~~~t~pVg~~~pN~~GLyDM~GNVwEW~~D~y~~~~~~~~~~~d~~g~~~~~~rv~RGGSw~~~~~~~---r~a~R~~~ 277 (294)
T 2y3c_A 201 SGSKTHEVKKKKPNWYGLYDIAGNVAEWCWDWRADIHTGDSFPQDYPGPASGSGRVLRGGSWAGSADYC---AVGERVNI 277 (294)
T ss_dssp SCSSCCCTTCSCCCTTSCSSSSSSSEEEEEEECCCBCTTCCCCTTCCCCSCCSSEEEESCCTTSCTGGG---STTCCEEE
T ss_pred CCCccccccccCCCcccccccCCCHHHHhcccccccccccccccCCCCCccCcceeeeCCCCCCChhhc---eEEEecCc
Confidence 2346899999999999999999999999999998865433 2356667777889999999999998876 78899988
Q ss_pred CCCCCCCCCCcccccc
Q psy8678 327 TPDSSAGNLGFRCAAD 342 (394)
Q Consensus 327 ~~~~~~~~iGFR~v~~ 342 (394)
.++.+..++|||||++
T Consensus 278 ~p~~~~~~~GFR~v~~ 293 (294)
T 2y3c_A 278 SPGVRCSDLGFRLACR 293 (294)
T ss_dssp CTTCCCTTEECCCEEC
T ss_pred CCCCccCCEEEEEEeE
Confidence 9999999999999975
No 5
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A
Probab=99.97 E-value=2.7e-31 Score=252.57 Aligned_cols=144 Identities=18% Similarity=0.210 Sum_probs=97.7
Q ss_pred ccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCcccccc--ccCCCCCCCCCCCCCCcc
Q psy8678 175 RMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANV--WQGEFPTNNTAADGYLST 252 (394)
Q Consensus 175 ~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~--~~~~~~~~~~~~~g~~~~ 252 (394)
....||++|||+||.+||+|+|+|||||+|||+||+|... ++..... .+|. |.+ ...+
T Consensus 228 ~~~~pve~VSWyEA~AYC~w~GkRLPTEAEWE~AArG~~~------g~~~~~d---~an~~~~~g-----------~~~t 287 (381)
T 1yu0_A 228 DGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGTTE------ATSSGGT---DVPTTGVNG-----------TGAT 287 (381)
T ss_dssp CSSCBCSSCCHHHHHHHHHHTTCBCCCHHHHHHHHTTSCT------TCCCCSS---BCCBTTSCC-----------BTCS
T ss_pred CCCCccceeeHHHHHHHHHHhCCCCCCHHHHHHHhcCCCc------cccccCC---cCCccccCC-----------CCCC
Confidence 4567999999999999999999999999999999998643 2221111 1221 111 1122
Q ss_pred ccCcCCCCCcccccccccCHHHhccccccCCCCCCCCCCCC---CCCCCCCeEEeCccccCCccccccceeccccCC-CC
Q psy8678 253 APVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPK---GPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQN-TP 328 (394)
Q Consensus 253 ~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~~~~~~~~---~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~-~~ 328 (394)
.++. ..+|+||||||+|||||||+|.+.+.+......++. .+.....+|+|||||.+ +..| ++..|... .|
T Consensus 288 t~~~-~~~N~fGLYDM~GNVWEWc~D~~~~~~gssw~~~Ypg~Gs~~~~~~rVLRGGSW~~-~~~~---r~~~Rn~~~~P 362 (381)
T 1yu0_A 288 SAWN-IFTSKWGVVQASGCLWTWGNEFGGVNGASEYTANTGGRGSVYAQPAAALFGGAWNG-TSLS---GSRAALWYSGP 362 (381)
T ss_dssp SCGG-GGCCTTCCTTCSSBCEEEEEEEEEEECCSSCBCCSSSSCCBSSCEEEEEESCBTTC-GGGC---STTCEECCCCT
T ss_pred CCCC-CCCCcccccccCCCeeeeCCccCcccccccccccCCCCCccccCCceeEEecccCC-Cccc---chhhhhcccCc
Confidence 2222 349999999999999999999866543221111111 11222378999999988 4333 55666544 68
Q ss_pred CCCCCCCCccccccC
Q psy8678 329 DSSAGNLGFRCAADK 343 (394)
Q Consensus 329 ~~~~~~iGFR~v~~~ 343 (394)
..+..++|||||++.
T Consensus 363 ~~r~~~~GFRcA~d~ 377 (381)
T 1yu0_A 363 SFSFAFFGARGVCDH 377 (381)
T ss_dssp TCCCTTEECCCEEEE
T ss_pred CccccceeEEEEeec
Confidence 889999999999865
No 6
>2y3c_A Treponema denticola variable protein 1; unknown function, periodontal disease; HET: CME; 1.40A {Treponema denticola}
Probab=99.18 E-value=1.4e-11 Score=116.98 Aligned_cols=45 Identities=33% Similarity=0.726 Sum_probs=41.1
Q ss_pred CCCCCcccccCCccccCCCccccccccccCCCCCCCCCCCcceEEEee
Q psy8678 345 PTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAAD 392 (394)
Q Consensus 345 ~~~~~~~~~~ggsw~~~~~~~~~~~~~~r~~~~~~~~~~~~gfr~~~~ 392 (394)
+..+..||+|||||.+.+..| |++.|....|+.+..+||||||++
T Consensus 249 ~~~~~~rv~RGGSw~~~~~~~---r~a~R~~~~p~~~~~~~GFR~v~~ 293 (294)
T 2y3c_A 249 PASGSGRVLRGGSWAGSADYC---AVGERVNISPGVRCSDLGFRLACR 293 (294)
T ss_dssp CSCCSSEEEESCCTTSCTGGG---STTCCEEECTTCCCTTEECCCEEC
T ss_pred CccCcceeeeCCCCCCChhhc---eEEEecCcCCCCccCCEEEEEEeE
Confidence 345678999999999999999 999999999999999999999986
No 7
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple sulfatase deficiency, cysteine sulfe oxidoreductase; HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7 PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X* 2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X*
Probab=98.85 E-value=1.1e-09 Score=104.70 Aligned_cols=54 Identities=80% Similarity=1.545 Sum_probs=47.2
Q ss_pred ccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCc
Q psy8678 109 STIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSW 162 (394)
Q Consensus 109 ~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w 162 (394)
..+....++||++|||+||.+||+|++.|||+++||||||++|.....|+|++-
T Consensus 124 ~~~~~~~~~PVv~VSw~dA~Ayc~W~g~RLPTEaEWEyAAr~g~~~~~y~~G~~ 177 (311)
T 1z70_X 124 STILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNK 177 (311)
T ss_dssp CCSTTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSC
T ss_pred cccccccCCCcccCCHHHHHHHHHHhCCCCCCHHHHHHHHhCCCCCCccCCCCc
Confidence 334456789999999999999999999999999999999999988877877543
No 8
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown function; 2.10A {Streptomyces coelicolor}
Probab=98.80 E-value=1.9e-09 Score=104.51 Aligned_cols=53 Identities=64% Similarity=1.252 Sum_probs=46.9
Q ss_pred ccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCcc
Q psy8678 111 IEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWL 163 (394)
Q Consensus 111 ~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~ 163 (394)
+....++||++|||+||.+||+|++.|||+++||||||++|.....|+|++-.
T Consensus 165 ~~~~~~~PVv~VSw~dA~ayc~W~g~RLPTEAEWEyAARgg~~~~~ypwG~~~ 217 (346)
T 2q17_A 165 ITGRPNHPVVHVSWNDATAYARWAGKRLPTEAEWEYAARGGLAGRRYAWGDEL 217 (346)
T ss_dssp CTTCTTSBCCSCCHHHHHHHHHHHTCBCCCHHHHHHHHHTTCSSCSBTTBSCS
T ss_pred cccCCCCCcccCCHHHHHHHHHHhCCCCcCHHHHHHHhhcCCCCCcCCCCCcC
Confidence 34567899999999999999999999999999999999999888778876543
No 9
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple sulfatase deficiency, HO DUF323, sugar binding protein; HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7
Probab=98.79 E-value=2.4e-09 Score=101.03 Aligned_cols=52 Identities=63% Similarity=1.527 Sum_probs=45.9
Q ss_pred ccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCc
Q psy8678 111 IEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSW 162 (394)
Q Consensus 111 ~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w 162 (394)
+....++||++|||+||.+||+|++.|||+++||||||++|.....|+|++-
T Consensus 110 ~~~~~~~PV~~VSw~dA~ayc~w~g~RLPTEaEWE~AAr~g~~~~~yp~g~~ 161 (284)
T 1y4j_A 110 IRERLEHPVLHVSWNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNW 161 (284)
T ss_dssp STTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSS
T ss_pred cccccCCCcccCCHHHHHHHHHHhCCCCCCHHHHHHHhccCCCCCccCCCCc
Confidence 3445789999999999999999999999999999999999988777777543
No 10
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A
Probab=98.52 E-value=5.1e-09 Score=99.94 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=34.7
Q ss_pred cCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCC
Q psy8678 114 RMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGG 151 (394)
Q Consensus 114 ~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g 151 (394)
....||.+|||++|++||.|.+.|||+++|||+|+.++
T Consensus 228 ~~~~pve~VSWyEA~AYC~w~GkRLPTEAEWE~AArG~ 265 (381)
T 1yu0_A 228 DGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGT 265 (381)
T ss_dssp CSSCBCSSCCHHHHHHHHHHTTCBCCCHHHHHHHHTTS
T ss_pred CCCCccceeeHHHHHHHHHHhCCCCCCHHHHHHHhcCC
Confidence 44679999999999999999999999999999988873
No 11
>3k7b_A Protein A33; C-type lectin-like domain, homodimer, poxvirus, EEV, EV, VIR protein; 2.10A {Vaccinia virus WR}
Probab=72.15 E-value=2.2 Score=32.66 Aligned_cols=21 Identities=33% Similarity=0.525 Sum_probs=19.7
Q ss_pred cCCHHHHHHHHHHcCCCCCCH
Q psy8678 182 HVSWNDAVAYCTWRGARLPTE 202 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLPTE 202 (394)
..+|.+|..+|.-+|.+||+.
T Consensus 27 pkTW~eA~~~C~~~G~~Lpsi 47 (96)
T 3k7b_A 27 YQMFSDAAANCTAESSTLPNK 47 (96)
T ss_dssp EECHHHHHHHHHHTTCBCCCH
T ss_pred CCCHHHHHHHHHHcCCccCCc
Confidence 478999999999999999997
No 12
>1o7b_T Tumor necrosis factor-inducible protein TSG-6; hyaluronan-binding domain, carbohydrate-binding domain, LINK module, cell adhesion, glycoprotein; NMR {Homo sapiens} SCOP: d.169.1.4 PDB: 1o7c_T 2pf5_A*
Probab=56.76 E-value=9.6 Score=29.17 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=30.2
Q ss_pred cCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCC
Q psy8678 182 HVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLEN 215 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~ 215 (394)
.+++.+|.+.|.-+|.+|.|-.|.+.|-+.+-+.
T Consensus 13 ~l~f~eA~~aC~~~ga~LAs~~QL~~A~~~G~~~ 46 (98)
T 1o7b_T 13 KLTYAEAKAVCEFEGGHLATYKQLEAARKIGFHV 46 (98)
T ss_dssp CBCHHHHHHHHHHSSCEECCHHHHHHHHTTTCCC
T ss_pred ccCHHHHHHHHHhcCCccCCHHHHHHHHHcCccc
Confidence 4889999999999999999999999999866543
No 13
>2jcq_A CD44 antigen; sugar-binding protein, hyauronan, LINK-domain, proteoglycan, polymorphism, blood group antigen, alternative splicing, lectin; HET: NAG GCU 5AX GOL; 1.25A {Mus musculus} PDB: 2jcr_A* 2jcp_A 2i83_A 1poz_A 1uuh_A
Probab=31.19 E-value=54 Score=27.12 Aligned_cols=39 Identities=21% Similarity=0.358 Sum_probs=32.1
Q ss_pred cCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccC
Q psy8678 182 HVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPW 220 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypw 220 (394)
.+++.+|.+.|.-+|.+|.|-.|-+.|.+.|.+.-.+-|
T Consensus 25 ~l~f~eA~~aC~~~gA~LAs~~QL~~Aw~~Gld~C~~GW 63 (154)
T 2jcq_A 25 SISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGF 63 (154)
T ss_dssp CBCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCCCSSCEE
T ss_pred ccCHHHHHHHHHhcCCEeCCHHHHHHHHHcCcccccCCc
Confidence 588999999999999999999999999887655433333
No 14
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=29.91 E-value=23 Score=32.48 Aligned_cols=22 Identities=41% Similarity=0.726 Sum_probs=20.0
Q ss_pred ccCCHHHHHHHHHHcCCCCCCH
Q psy8678 181 VHVSWNDAVAYCTWRGARLPTE 202 (394)
Q Consensus 181 ~~Vsw~dA~~yc~wlg~RLPTE 202 (394)
..++|.+|..+|+-.|+|||+.
T Consensus 192 ~~~~~~~A~~~C~~~g~~lp~s 213 (282)
T 1f00_I 192 KRVTYNDAVNTCKNFGGKLPSS 213 (282)
T ss_dssp EEECHHHHHHHHHHTTCBCCSS
T ss_pred ceecHHHHHHHHhhcCccCCcc
Confidence 4589999999999999999994
No 15
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C
Probab=22.25 E-value=37 Score=25.66 Aligned_cols=20 Identities=30% Similarity=0.793 Sum_probs=16.8
Q ss_pred cCCHHHHHHHHHHcCCCCCC
Q psy8678 182 HVSWNDAVAYCTWRGARLPT 201 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLPT 201 (394)
..+|.+|..+|+-+|..|-+
T Consensus 20 ~~~w~~A~~~C~~~g~~La~ 39 (115)
T 3ff9_A 20 KKDWNSSLKFCADKGSHLLT 39 (115)
T ss_dssp CBCHHHHHHHHHHTTCEECC
T ss_pred CcCHHHHHHHHHhcCCeeee
Confidence 47899999999988877655
No 16
>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0
Probab=22.21 E-value=33 Score=25.82 Aligned_cols=28 Identities=21% Similarity=0.444 Sum_probs=21.3
Q ss_pred cCCHHHHHHHHHHcCCCCC---CHHHHHHHH
Q psy8678 182 HVSWNDAVAYCTWRGARLP---TEAEWEYGC 209 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLP---TEaEWEyAA 209 (394)
..+|.+|..+|+-+|..|. +++|-++..
T Consensus 19 ~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~ 49 (112)
T 3ff7_C 19 EKDWNSSLEFCLARDSHLLVITDNQEMSLLQ 49 (112)
T ss_dssp CBCHHHHHHHHHTTTCEECCCCSHHHHHHHH
T ss_pred ccCHHHHHHHHhhcCCeEeeECCHHHHHHHH
Confidence 5789999999999887654 566655544
No 17
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=22.18 E-value=37 Score=26.08 Aligned_cols=29 Identities=28% Similarity=0.474 Sum_probs=22.3
Q ss_pred cCCHHHHHHHHHHcCCCC---CCHHHHHHHHh
Q psy8678 182 HVSWNDAVAYCTWRGARL---PTEAEWEYGCR 210 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RL---PTEaEWEyAAr 210 (394)
..+|.+|..+|+.+|..| -+++|-++...
T Consensus 19 ~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~ 50 (128)
T 1dv8_A 19 GKAWADADNYCRLEDAHLVVVTSWEEQKFVQH 50 (128)
T ss_dssp CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHH
T ss_pred CcCHHHHHHHHhhCCCEEcccCCHHHHHHHHH
Confidence 469999999999999765 46777666553
No 18
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*
Probab=21.59 E-value=39 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.086 Sum_probs=22.8
Q ss_pred cCCHHHHHHHHHHcCCCC---CCHHHHHHHHh
Q psy8678 182 HVSWNDAVAYCTWRGARL---PTEAEWEYGCR 210 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RL---PTEaEWEyAAr 210 (394)
..+|.+|..+|+-+|..| -+++|-.+...
T Consensus 10 ~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~ 41 (113)
T 1rdl_1 10 RMPLNRAKALCSELQGTVATPRNAEENRAIQN 41 (113)
T ss_dssp CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHH
T ss_pred ccCHHHHHHHHHhcCCEEcccCCHHHHHHHHH
Confidence 478999999999999754 57777776654
No 19
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*
Probab=21.26 E-value=52 Score=25.13 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=22.2
Q ss_pred cCCHHHHHHHHHHcCCCCCC-----HHHHHHHHh
Q psy8678 182 HVSWNDAVAYCTWRGARLPT-----EAEWEYGCR 210 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RLPT-----EaEWEyAAr 210 (394)
.++|.+|..+|+-+|..|-+ ++|-++...
T Consensus 11 ~~~w~~A~~~C~~~g~~La~~~i~s~~e~~~l~~ 44 (125)
T 1byf_A 11 TMNYADAGTYCQSRGMALVSSAMRDSTMVKAILA 44 (125)
T ss_dssp EECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCEeeecCCCCHHHHHHHHH
Confidence 47899999999999986665 566655543
No 20
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.00A {Mus musculus} SCOP: d.169.1.1 PDB: 1qo3_C 3cad_A
Probab=20.66 E-value=41 Score=25.90 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=22.6
Q ss_pred cCCHHHHHHHHHHcCCCC---CCHHHHHHHHh
Q psy8678 182 HVSWNDAVAYCTWRGARL---PTEAEWEYGCR 210 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RL---PTEaEWEyAAr 210 (394)
..+|.+|..+|+-+|..| -+++|-++...
T Consensus 25 ~~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~ 56 (130)
T 3g8k_A 25 RKTWSGCKQTCQISSLSLLKIDNEDELKFLKL 56 (130)
T ss_dssp CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCeEcccCCHHHHHHHHH
Confidence 478999999999999765 56777666544
No 21
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=20.17 E-value=39 Score=25.49 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=22.3
Q ss_pred cCCHHHHHHHHHHcCCCC---CCHHHHHHHHh
Q psy8678 182 HVSWNDAVAYCTWRGARL---PTEAEWEYGCR 210 (394)
Q Consensus 182 ~Vsw~dA~~yc~wlg~RL---PTEaEWEyAAr 210 (394)
..+|.+|..+|+.+|..| -+++|-++...
T Consensus 12 ~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~ 43 (115)
T 2msb_A 12 RMPFSKVKALCSELRGTVAIPRNAEENKAIQE 43 (115)
T ss_dssp EECHHHHHHHHHHTTCEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHhCCCEEeccCCHHHHHHHHH
Confidence 478999999999998754 56777666543
No 22
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Probab=20.01 E-value=45 Score=26.11 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=23.5
Q ss_pred ccCCHHHHHHHHHHcCCCC---CCHHHHHHHHh
Q psy8678 181 VHVSWNDAVAYCTWRGARL---PTEAEWEYGCR 210 (394)
Q Consensus 181 ~~Vsw~dA~~yc~wlg~RL---PTEaEWEyAAr 210 (394)
...+|.+|..+|+-+|..| -+++|-++...
T Consensus 22 ~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~ 54 (140)
T 2ox9_A 22 EKEIFEDAKLFCEDKSSHLVFINSREEQQWIKK 54 (140)
T ss_dssp CCBCHHHHHHHHHHTTCEECCCCSHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhcCCEEeeeCCHHHHHHHHH
Confidence 3478999999999999755 46777776654
Done!