Query psy8679
Match_columns 221
No_of_seqs 209 out of 290
Neff 4.1
Searched_HMMs 13730
Date Sat Aug 17 00:58:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8679.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8679hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sqwa1 b.122.1.1 (A:95-170) N 100.0 8.5E-48 6.2E-52 284.9 6.1 76 136-211 1-76 (76)
2 d1sqwa2 d.17.6.3 (A:1-94) Nip7 100.0 1.3E-42 9.7E-47 265.9 2.1 82 54-135 13-94 (94)
3 d1sqwa2 d.17.6.3 (A:1-94) Nip7 99.9 7.6E-29 5.5E-33 189.4 2.7 62 3-64 15-76 (94)
4 d1iq8a3 b.122.1.1 (A:506-582) 98.6 5E-08 3.6E-12 69.4 6.6 70 135-205 2-71 (77)
5 d2ey4a1 b.122.1.1 (A:253-336) 98.5 7.4E-08 5.4E-12 69.7 6.1 76 137-213 3-81 (84)
6 d2apoa1 b.122.1.1 (A:247-331) 98.4 1.2E-07 8.5E-12 68.8 5.7 78 137-215 4-84 (85)
7 d1q7ha1 b.122.1.1 (A:69-153) H 98.2 1.5E-06 1.1E-10 62.6 6.6 71 134-205 1-71 (85)
8 d1r3ea1 b.122.1.1 (A:238-318) 97.9 4.1E-06 3E-10 60.7 4.1 62 137-199 3-64 (81)
9 d2cx1a1 b.122.1.1 (A:91-183) H 97.0 0.0004 2.9E-08 50.5 4.7 62 136-197 2-64 (93)
10 d2q07a1 b.122.1.1 (A:460-527) 96.8 0.0015 1.1E-07 45.4 6.5 62 136-205 1-62 (68)
11 d2as0a1 b.122.1.9 (A:1-72) Hyp 96.3 0.00094 6.9E-08 45.9 2.6 56 136-191 2-58 (72)
12 d1wxxa1 b.122.1.9 (A:1-64) Hyp 73.5 0.76 5.6E-05 30.8 2.0 48 137-188 2-50 (64)
13 d1k8wa3 b.122.1.1 (A:251-312) 47.6 6.8 0.0005 25.5 3.0 45 137-188 3-48 (62)
14 d2coaa1 b.55.1.1 (A:8-119) Pro 40.1 9.9 0.00072 25.7 3.0 62 22-90 19-83 (112)
15 d1h6la_ b.68.3.1 (A:) Thermost 30.6 13 0.00095 31.4 2.8 34 137-184 30-64 (353)
16 d2d7ma1 b.1.18.10 (A:8-109) Fi 20.5 45 0.0033 22.4 3.7 39 108-146 61-101 (102)
17 d2dj4a1 b.1.18.10 (A:8-108) Fi 20.4 55 0.004 21.8 4.1 39 108-146 60-100 (101)
No 1
>d1sqwa1 b.122.1.1 (A:95-170) Nip7p homolog, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=8.5e-48 Score=284.94 Aligned_cols=76 Identities=68% Similarity=1.197 Sum_probs=75.5
Q ss_pred ceEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEEecccce
Q psy8679 136 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGFNQSDIG 211 (221)
Q Consensus 136 ~Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~~qaD~G 211 (221)
|||||||+|||+|||||||+||||+||||+||+|+|||||||+|+|||||++||||+|||++||++||||||||+|
T Consensus 1 ~KVWvKp~~E~~FLYGn~VlK~~l~rite~~p~~~GVvV~sm~D~PLGFGvaakst~e~r~~dp~~ivv~hQaDiG 76 (76)
T d1sqwa1 1 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIG 76 (76)
T ss_dssp CEEEECHHHHHHHTTTCCEEGGGEEEECTTCCTTCEEEEEETTCCEEEEEEESSCHHHHHHSCTTSEEEEEEEEGG
T ss_pred CcEEecCCcccceeeccchhhhhcccccCCCCCCceEEEEeCCCCccceeeeccCHHHHhhCCCccEEEEEecCCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-42 Score=265.92 Aligned_cols=82 Identities=65% Similarity=1.115 Sum_probs=79.8
Q ss_pred cceecccccccccccccCCCCeeEEEeeCcEEEEEcHHHHhhhcccCCCCeeeeeeeeeeeeecceEEEEeeehhhhccc
Q psy8679 54 LGTCFGNIGSNVKLLIDRPDGTYCFREMRDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPY 133 (221)
Q Consensus 54 lGtc~GyiG~ni~~li~~~d~~y~frlhk~rVyYvs~~l~k~a~~i~r~~L~S~Gtc~GkFtKs~kFrl~ItaL~~La~~ 133 (221)
+-++++|||+|++.|||+||++||||||++|||||||+|+|+|++|+|+||+|+||||||||||||||||||||++||||
T Consensus 13 feKLa~yiG~Ni~~li~~~d~~y~FRLhk~RVyYvse~i~k~A~~i~r~~L~s~Gtc~GKFTKtgkFrL~ITaL~~La~y 92 (94)
T d1sqwa2 13 FEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPY 92 (94)
T ss_dssp HHHHHHHHGGGTHHHHEETTEEEEEEEETTEEEEEEHHHHHTTTSSCHHHHHHHSEEEEEECTTSCEEECGGGHHHHGGG
T ss_pred HHHHHHHHhhhHHHHhcCCCCCEEEEEeCCEEEEEhHHHHHHhhcCChhheeEeeeEEEEEecCCeEEEEEEehHhhhhh
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cc
Q psy8679 134 AQ 135 (221)
Q Consensus 134 ak 135 (221)
||
T Consensus 93 Ak 94 (94)
T d1sqwa2 93 AK 94 (94)
T ss_dssp CS
T ss_pred cC
Confidence 96
No 3
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=7.6e-29 Score=189.36 Aligned_cols=62 Identities=56% Similarity=1.056 Sum_probs=58.3
Q ss_pred cccccccccccccccCCCCceeEEEeCCeEEEEcHHHHhhhcccCcccceecceeccccccc
Q psy8679 3 QVIHNIGSNVKLLIDRPDGTYCFREMRDRVFYVSEKILTLAENFGPDHLLALGTCFGNIGSN 64 (221)
Q Consensus 3 ~~~~yiG~n~~~li~r~d~~y~FRlhk~RVyYvse~i~k~At~i~r~~L~slGtc~GyiG~n 64 (221)
.+|+|||+|+++|||||||+|||||||||||||||+|||+|+||+|+||+|+|||+|=.-+.
T Consensus 15 KLa~yiG~Ni~~li~~~d~~y~FRLhk~RVyYvse~i~k~A~~i~r~~L~s~Gtc~GKFTKt 76 (94)
T d1sqwa2 15 KIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISGDKLVSLGTCFGKFTKT 76 (94)
T ss_dssp HHHHHHGGGTHHHHEETTEEEEEEEETTEEEEEEHHHHHTTTSSCHHHHHHHSEEEEEECTT
T ss_pred HHHHHHhhhHHHHhcCCCCCEEEEEeCCEEEEEhHHHHHHhhcCChhheeEeeeEEEEEecC
Confidence 46899999999999999999999999999999999999999999999999999999866443
No 4
>d1iq8a3 b.122.1.1 (A:506-582) Archaeosine tRNA-guanine transglycosylase, C3 domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.58 E-value=5e-08 Score=69.43 Aligned_cols=70 Identities=23% Similarity=0.165 Sum_probs=65.8
Q ss_pred cceEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEE
Q psy8679 135 QFKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGF 205 (221)
Q Consensus 135 k~Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~ 205 (221)
++||||+..++..-..|.+++..||.++++++..++-|+|++.++.++|.|.+..|++|+..++. |++|.
T Consensus 2 ~~rV~Vd~gA~~~v~~Ga~l~~~GV~~~~~~~~~Gd~V~I~~~~g~~iavG~a~~ss~ei~~~~k-G~avk 71 (77)
T d1iq8a3 2 RMRVVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVVNENDELLATGQALLSGREMIVFQY-GRAVK 71 (77)
T ss_dssp TTEEEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEECTTCCEEEEEEESSCHHHHHHCCS-SEEEE
T ss_pred CEEEEECcchHHHHHhcCCcccCeEEEEcCCCCCCCEEEEEECCCcEEEEEEEecCHHHHHhcCC-cEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999985 66664
No 5
>d2ey4a1 b.122.1.1 (A:253-336) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.51 E-value=7.4e-08 Score=69.66 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=67.2
Q ss_pred eEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEE--e-cccceee
Q psy8679 137 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGF--N-QSDIGEY 213 (221)
Q Consensus 137 Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~--~-qaD~GeY 213 (221)
||||++++...-+.|.+++..||.++++++..++-|+|++.++.++|+|.+..|++|+...+.. +++- | ..|.|.|
T Consensus 3 ~v~Vd~~A~~ai~~Ga~l~~~GV~~~~~~f~~Gd~V~I~~~~g~~iavG~a~~ss~ei~~~~kG-~av~~~~v~m~~~~y 81 (84)
T d2ey4a1 3 KVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKG-IAVDVEKVFMPRDWY 81 (84)
T ss_dssp EEEECHHHHHHHTTTCCEEGGGEEEEETTCCTTCEEEEEETTSCEEEEEEESSCHHHHHHCCSS-EEEEEEEECSCTTSS
T ss_pred EEEEChhHHHHHHcCCCcCCCeEEEEcCCCCCCCEEEEEeCCCceEEEEEEeeCHHHHHHhcCC-eEEEEEEEecCCCCC
Confidence 6999999999999999999999999999999999999999999999999999999999999864 4431 1 2556655
No 6
>d2apoa1 b.122.1.1 (A:247-331) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.45 E-value=1.2e-07 Score=68.82 Aligned_cols=78 Identities=27% Similarity=0.294 Sum_probs=68.7
Q ss_pred eEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEE---ecccceee
Q psy8679 137 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGF---NQSDIGEY 213 (221)
Q Consensus 137 Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~---~qaD~GeY 213 (221)
+|||+.+|...-++|.+++-.||.++++++..++-|+|++.++.++|.|.+..|++|+...++ |+++- -..|.|.|
T Consensus 4 ~v~Vd~~Av~ai~~Ga~L~~pGV~~~~~~~~~Gd~V~V~~~~g~~iavG~~~~ss~ei~~~~~-G~av~~~~V~~~~~~Y 82 (85)
T d2apoa1 4 KVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNADK-GVAVDVERVYMDRGTY 82 (85)
T ss_dssp EEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEECTTSCEEEEEEESSCHHHHHHCSS-SEEEEEEEECSCTTSS
T ss_pred EEEECccHHHHHHcCCCccccEEEEEcCCCcCCCEEEEEeCCCCEEEEEEEeeCHHHHhhcCC-CEEEEEEEEecCCCCC
Confidence 799999999999999999999999999999999999999999999999999999999999876 55552 24566666
Q ss_pred ec
Q psy8679 214 IR 215 (221)
Q Consensus 214 LR 215 (221)
=|
T Consensus 83 p~ 84 (85)
T d2apoa1 83 PR 84 (85)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 7
>d1q7ha1 b.122.1.1 (A:69-153) Hypothetical protein Ta1423, C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.20 E-value=1.5e-06 Score=62.56 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=65.0
Q ss_pred CcceEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEE
Q psy8679 134 AQFKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGF 205 (221)
Q Consensus 134 ak~Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~ 205 (221)
.|..|+|+..++..-+.|.+++-.||.++.+++..++-|.|++.++.|+|.|.+..|++|++.... ++++.
T Consensus 1 ~k~~I~Vd~gA~~~l~~GA~L~~pGV~~~~~~~~~gd~V~I~~~~g~~iavG~a~~ss~e~~~~~~-G~~v~ 71 (85)
T d1q7ha1 1 SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVKSSKGYFIAVGMAEMDAGEVMATKR-GKAAR 71 (85)
T ss_dssp SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEEETTSCEEEEEEESSCHHHHHHHCC-SEEEE
T ss_pred CCCEEEECcCHHHHHHCCCCcCCCccEECCCCCCCCCEEEEEeCCCCEEEEEEEEeCHHHHHhhcC-CEEEE
Confidence 367899999999999999999999999999999999999999999999999999999999998864 55544
No 8
>d1r3ea1 b.122.1.1 (A:238-318) Pseudouridine synthase II TruB, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.90 E-value=4.1e-06 Score=60.74 Aligned_cols=62 Identities=19% Similarity=0.143 Sum_probs=58.9
Q ss_pred eEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCC
Q psy8679 137 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADP 199 (221)
Q Consensus 137 Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp 199 (221)
||||+.++...-++|.+++..||..+. ++..++-|.|++.++.++|+|.+..++++++++..
T Consensus 3 ~VvV~~~A~~~i~~Ga~l~~pGI~~~d-~~~~Gd~V~I~~~~g~~iaiG~a~~~S~ei~~~~K 64 (81)
T d1r3ea1 3 RVVVHQESTKMILNGSQIHLEMLKEWD-GFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRK 64 (81)
T ss_dssp EEECCTTTHHHHTTTCCEESSSCCEEC-CCCTTCEEEEECSSSCEEEEEEESSCTTCCCCSCC
T ss_pred EEEEccchHHHHhcCCccccccceeec-ccCCCCEEEEEeCCCCEEEEEEEecCHHHHHHhhc
Confidence 799999999999999999999999996 79999999999999999999999999999988754
No 9
>d2cx1a1 b.122.1.1 (A:91-183) Hypothetical protein APE0525, C-terminal domain {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=96.96 E-value=0.0004 Score=50.49 Aligned_cols=62 Identities=18% Similarity=0.183 Sum_probs=56.3
Q ss_pred ceEEEccCccceeecccccccccceeecccCCCcceEEEEecC-CCeeeEEeeeechhHhhhc
Q psy8679 136 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMN-DVPLGFGVAAKSTAECKLA 197 (221)
Q Consensus 136 ~Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~n-d~pLGFGv~akst~~~~~~ 197 (221)
-.|.|++.|...-+.|.+++-.+|..++.++++++-|.|.+.+ +.||+.|.+..|++|+++.
T Consensus 2 g~i~vd~gA~~al~~GA~Lm~pGIv~~~g~f~~Gd~V~I~~~~~~~~iAvG~~~~~s~ei~~~ 64 (93)
T d2cx1a1 2 GVVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVVAALYHETRTPVMVGVAEVDSSALEKL 64 (93)
T ss_dssp EEEEECHHHHHHHHTTCCEEGGGEEEEEECCCTTCEEEEEETTTTEEEEEEEESSCHHHHHHH
T ss_pred CEEEECcCHHHHHHCCCCcCccccEECCCCCCCCCEEEEEECCCCeEEEEEEEecCHHHHHHH
Confidence 3577888888888899999999999999999999999999974 7899999999999999864
No 10
>d2q07a1 b.122.1.1 (A:460-527) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.82 E-value=0.0015 Score=45.42 Aligned_cols=62 Identities=24% Similarity=0.249 Sum_probs=50.8
Q ss_pred ceEEEccCccceeecccccccccceeecccCCCcceEEEEecCCCeeeEEeeeechhHhhhcCCCcEEEE
Q psy8679 136 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGF 205 (221)
Q Consensus 136 ~Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst~~~~~~dp~~ivv~ 205 (221)
|.|+|.+ |+=-.+|+-.||.+.++++..++-|+|. ++.|+|.|.+.-|+.|+..++. |++|.
T Consensus 1 y~V~idd-----fv~~G~v~apgI~~~d~~I~~GD~V~V~--~ge~vavG~A~ms~~Em~~~~k-G~aVk 62 (68)
T d2q07a1 1 YTVEIGD-----FEVKGTIFAGGVLRADEKIRPNDVVVFH--NSRIFGVGLAAMSGKEMAGSEK-GIAIN 62 (68)
T ss_dssp SEEEECS-----SCCCSEEEGGGEEEECTTCCTTCEEEEE--CSSCEEEEEESSCHHHHSCC---CEEEE
T ss_pred CEEEECC-----cccCCcccccchhhhCCCCCCCCEEEEE--eCCEEEEEEEeeCHHHHhhcCC-cEEEE
Confidence 5677774 4444499999999999999999999997 5899999999999999999886 56553
No 11
>d2as0a1 b.122.1.9 (A:1-72) Hypothetical protein PH1915, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.30 E-value=0.00094 Score=45.94 Aligned_cols=56 Identities=25% Similarity=0.253 Sum_probs=50.2
Q ss_pred ceEEEccCccceeecccc-cccccceeecccCCCcceEEEEecCCCeeeEEeeeech
Q psy8679 136 FKVWVKPQAEQQFLYGHN-ILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKST 191 (221)
Q Consensus 136 ~Kvwvk~~gE~~FLYGn~-V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~akst 191 (221)
-||+|+|.++....=|.. |+..+|.+++.+.+..+-|-|++.++.+||.|....++
T Consensus 2 ~~v~l~~~a~~~l~~g~pwi~~~~i~~~~g~~~~Gd~V~v~d~~g~~lg~G~~n~~S 58 (72)
T d2as0a1 2 ARVVVDAQAARAIGKGAMIVFKKGVVRVEGDIKPGDIVEVYTRGGKFLGKGFANPNS 58 (72)
T ss_dssp CEEEECHHHHHHHHTTCCEEEGGGEEEEESCCCTTCEEEEEETTCCEEEEEEECTTS
T ss_pred CEEEECHhHHHHHHcCCCeECHhhcccccCCcCCCcEEEEEeCCCcEEEEEEECCCC
Confidence 379999999999988866 99999999999999999999999999999999985433
No 12
>d1wxxa1 b.122.1.9 (A:1-64) Hypothetical protein TTHA1280, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=73.52 E-value=0.76 Score=30.77 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=27.3
Q ss_pred eEEEccCccceeecccc-cccccceeecccCCCcceEEEEecCCCeeeEEeee
Q psy8679 137 KVWVKPQAEQQFLYGHN-ILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAA 188 (221)
Q Consensus 137 Kvwvk~~gE~~FLYGn~-V~Ks~l~rite~~~~~~GVvV~n~nd~pLGFGv~a 188 (221)
||-|||++|....-|.. |+.+.|.+.. ++.+-++|++ ++.+||.|...
T Consensus 2 kv~lk~~~~~rl~~gHPWVf~~~i~~~~---~~~g~~~v~~-~~~~lg~g~~n 50 (64)
T d1wxxa1 2 RIQVNAKGAARLLSRHLWVFRRDVVSGP---ETPGLYPVYW-GRRFLALALYN 50 (64)
T ss_dssp CEEECHHHHHHHHTTCCEECGGGEEECC---SSCEEEEEEE-TTEEEEEEEEC
T ss_pred EEEEccchhhHhhcCCccchhhhhhccC---CCCCeEEEEE-CCcEEEEEEEC
Confidence 68889887765433332 2333333333 3333444455 56799999884
No 13
>d1k8wa3 b.122.1.1 (A:251-312) Pseudouridine synthase II TruB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.60 E-value=6.8 Score=25.45 Aligned_cols=45 Identities=22% Similarity=0.166 Sum_probs=35.3
Q ss_pred eEEEccCccceeecccccccccceeecccCCCcceEEEEe-cCCCeeeEEeee
Q psy8679 137 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLN-MNDVPLGFGVAA 188 (221)
Q Consensus 137 Kvwvk~~gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n-~nd~pLGFGv~a 188 (221)
+|.+.+.....|+-|+-|--+ +.+..+-|-||. .++..||.|...
T Consensus 3 ~v~L~~~~~~~~~~GQ~V~~~-------~~~~~g~vRvy~~~~~~FlGiGei~ 48 (62)
T d1k8wa3 3 VVNLPLTSSVYFKNGNPVRTS-------GAPLEGLVRVTEGENGKFIGMGEID 48 (62)
T ss_dssp EEEECHHHHHHHTTTCCBCCS-------SCCSSSEEEEEETTTTEEEEEEEEC
T ss_pred eEEECHHHHHHhhCCCEeecC-------CCCCCcEEEEEECCCCeEEEEEEEC
Confidence 578888888899999988533 345566799996 678999999873
No 14
>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.13 E-value=9.9 Score=25.71 Aligned_cols=62 Identities=13% Similarity=0.210 Sum_probs=33.5
Q ss_pred ceeEEEeCCeE-EEEcHHHHhhhcccCcccceecceec-ccccccccccccCCCCeeEEEee-CcEEEEEcH
Q psy8679 22 TYCFREMRDRV-FYVSEKILTLAENFGPDHLLALGTCF-GNIGSNVKLLIDRPDGTYCFREM-RDRVFYVSE 90 (221)
Q Consensus 22 ~y~FRlhk~RV-yYvse~i~k~At~i~r~~L~slGtc~-GyiG~ni~~li~~~d~~y~frlh-k~rVyYvs~ 90 (221)
+.=|.|..+.. ||-+++-- ...-.|.|..+. -+...+. .......++|||.+. .+|+||+..
T Consensus 19 kRwFvL~~~~L~YYk~~~~~------~p~g~I~L~~~~~v~~~~~~-~~~~~~~~~~~F~I~T~~rtyy~~~ 83 (112)
T d2coaa1 19 RHYWRLDCKCITLFQNNTTN------RYYKEIPLSEILTVESAQNF-SLVPPGTNPHCFEIVTANATYFVGE 83 (112)
T ss_dssp EEEEEECSSEEEEESSSSCS------SCSEEEETTTCCEEEESCCC-SSSCTTSCCEEEEEECSSCCCCEEC
T ss_pred EEEEEEEcceEEEEeccCCC------ccceEEeeeccccccccccc-cccccCCCccEEEEEeCCeEEEEec
Confidence 36688888887 55554321 222333443332 2222221 111222367999996 779999955
No 15
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=30.62 E-value=13 Score=31.41 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=23.0
Q ss_pred eEEEccC-ccceeecccccccccceeecccCCCcceEEEEecCCCeeeE
Q psy8679 137 KVWVKPQ-AEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGF 184 (221)
Q Consensus 137 Kvwvk~~-gE~~FLYGn~V~Ks~l~rite~~~~~~GVvV~n~nd~pLGF 184 (221)
=||+.|. .+.+-+.|- .+++|+.||++++.-|.+
T Consensus 30 AIW~n~~~p~~SlI~gT--------------dK~~Gl~vYdL~G~~l~~ 64 (353)
T d1h6la_ 30 AIWLDPKNPQNSKLITT--------------NKKSGLAVYSLEGKMLHS 64 (353)
T ss_dssp EEECCSSCGGGCEEEEE--------------ETTSCCEEEETTCCEEEE
T ss_pred eEEcCCCCcCccEEEEE--------------cCcCCEEEEcCCCcEEEe
Confidence 4899885 677776663 356677777777666554
No 16
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.50 E-value=45 Score=22.40 Aligned_cols=39 Identities=23% Similarity=0.453 Sum_probs=32.4
Q ss_pred eeeeeeee--ecceEEEEeeehhhhcccCcceEEEccCccc
Q psy8679 108 GTCFGKFT--KSGKFRLHITALSYLAPYAQFKVWVKPQAEQ 146 (221)
Q Consensus 108 Gtc~GkFt--Ks~kFrl~ItaL~~La~~ak~Kvwvk~~gE~ 146 (221)
|++.-.|| ..|.+.++|.--..--+-+.+.|.|.|.++-
T Consensus 61 g~y~v~y~P~~~G~h~i~V~~~g~~I~gSPF~v~V~p~~d~ 101 (102)
T d2d7ma1 61 GTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDA 101 (102)
T ss_dssp SCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEEEECCSSC
T ss_pred cEEEEEEEECCCEeEEEEEEECCEECCCCCEEEEEECCCCC
Confidence 77888887 5789999998888777788899999988764
No 17
>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.41 E-value=55 Score=21.80 Aligned_cols=39 Identities=26% Similarity=0.366 Sum_probs=33.2
Q ss_pred eeeeeeee--ecceEEEEeeehhhhcccCcceEEEccCccc
Q psy8679 108 GTCFGKFT--KSGKFRLHITALSYLAPYAQFKVWVKPQAEQ 146 (221)
Q Consensus 108 Gtc~GkFt--Ks~kFrl~ItaL~~La~~ak~Kvwvk~~gE~ 146 (221)
|++.-+|| ..|.+.++|+--..--+-+.+++.|.|.++-
T Consensus 60 G~y~v~y~P~~~G~y~i~V~~~g~~I~gSPF~v~V~~~~da 100 (101)
T d2dj4a1 60 GTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPTYDA 100 (101)
T ss_dssp SEEEEEECCSSCEEEEEEEEESSSBCTTCSEEEEEBCSSCC
T ss_pred CEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEEECCCCC
Confidence 78888997 6889999999888888888899999988764
Done!