Your job contains 1 sequence.
>psy8680
MRDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWV
KPQADQQFLYGHNILKSGLARITENTPKYQGVIFKVWVKPQAEQQFLYGHNILKSGLARI
TENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKLADPLAIVGFNQSDIGEYIRYMTNMLD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8680
(180 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q56P27 - symbol:NIP7 "60S ribosome subunit biog... 361 4.1e-33 1
UNIPROTKB|E1BC14 - symbol:NIP7 "60S ribosome subunit biog... 360 5.2e-33 1
UNIPROTKB|J9NWQ0 - symbol:NIP7 "60S ribosome subunit biog... 358 8.5e-33 1
UNIPROTKB|Q9Y221 - symbol:NIP7 "60S ribosome subunit biog... 357 1.1e-32 1
ZFIN|ZDB-GENE-050522-256 - symbol:nip7 "nuclear import 7 ... 352 3.7e-32 1
MGI|MGI:1913414 - symbol:Nip7 "nuclear import 7 homolog (... 351 4.7e-32 1
RGD|620069 - symbol:Nip7 "NIP7, nucleolar pre-rRNA proces... 349 7.7e-32 1
UNIPROTKB|E1C494 - symbol:NIP7 "60S ribosome subunit biog... 335 2.3e-30 1
FB|FBgn0039233 - symbol:CG7006 species:7227 "Drosophila m... 328 1.3e-29 1
WB|WBGene00016607 - symbol:C43E11.9 species:6239 "Caenorh... 305 3.5e-27 1
DICTYBASE|DDB_G0295477 - symbol:nip7 "60S ribosome subuni... 295 4.0e-26 1
POMBASE|SPCC320.11c - symbol:SPCC320.11c "RNA-binding pro... 292 8.4e-26 1
CGD|CAL0005065 - symbol:NIP7 species:5476 "Candida albica... 280 1.6e-24 1
UNIPROTKB|G4NBT8 - symbol:MGG_00482 "60S ribosome subunit... 261 1.6e-22 1
SGD|S000006132 - symbol:NIP7 "Nucleolar protein required ... 256 5.5e-22 1
TAIR|locus:2130704 - symbol:AT4G15770 species:3702 "Arabi... 249 3.0e-21 1
UNIPROTKB|J3QRR4 - symbol:NIP7 "60S ribosome subunit biog... 235 9.2e-20 1
UNIPROTKB|J3QRD6 - symbol:NIP7 "60S ribosome subunit biog... 231 2.5e-19 1
ASPGD|ASPL0000028016 - symbol:AN8491 species:162425 "Emer... 226 8.3e-19 1
GENEDB_PFALCIPARUM|PF14_0635 - symbol:PF14_0635 "RNA bind... 211 3.2e-17 1
UNIPROTKB|Q8IKH0 - symbol:PF14_0635 "60S ribosome subunit... 211 3.2e-17 1
UNIPROTKB|J3QLW7 - symbol:NIP7 "60S ribosome subunit biog... 204 1.8e-16 1
>UNIPROTKB|Q56P27 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9823 "Sus scrofa" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 HSSP:Q9Y221 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AY864609
EMBL:AY974338 RefSeq:NP_001041536.1 UniGene:Ssc.53939
ProteinModelPortal:Q56P27 SMR:Q56P27 STRING:Q56P27
Ensembl:ENSSSCT00000003057 GeneID:595107 KEGG:ssc:595107
Uniprot:Q56P27
Length = 180
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 66/91 (72%), Positives = 79/91 (86%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSEKIL LA N D L++LGTCFGKFTK+ KFRLHITAL YLAPYA++KVW+KP
Sbjct: 42 DRVYYVSEKILKLAANISGDKLMSLGTCFGKFTKTHKFRLHITALDYLAPYAKYKVWIKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 102 GAEQSFLYGNHVLKSGLGRITENTSQYQGVV 132
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 55/81 (67%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M D+PLGFGVAAKST +C+
Sbjct: 95 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEY+R+
Sbjct: 155 KVDPMAIVVFHQADIGEYVRH 175
>UNIPROTKB|E1BC14 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 CTD:51388 GeneTree:ENSGT00390000003591 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:DAAA02046699 IPI:IPI00695177 RefSeq:NP_001179168.1
UniGene:Bt.46631 ProteinModelPortal:E1BC14
Ensembl:ENSBTAT00000002182 GeneID:509981 KEGG:bta:509981
NextBio:20869229 Uniprot:E1BC14
Length = 180
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 66/91 (72%), Positives = 79/91 (86%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSEKIL LA N D L++LGTCFGKFTK+ KFRLHITAL YLAPYA++KVW+KP
Sbjct: 42 DRVYYVSEKILKLAANISGDKLVSLGTCFGKFTKTHKFRLHITALDYLAPYAKYKVWIKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 102 GAEQSFLYGNHVLKSGLGRITENTSQYQGVV 132
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 56/81 (69%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M DVPLGFGVAAKST +C+
Sbjct: 95 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEY+R+
Sbjct: 155 KVDPMAIVVFHQADIGEYVRH 175
>UNIPROTKB|J9NWQ0 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 GeneTree:ENSGT00390000003591 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:AAEX03004108 Ensembl:ENSCAFT00000046330 Uniprot:J9NWQ0
Length = 190
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 66/91 (72%), Positives = 79/91 (86%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSEKIL LA N D L++LGTCFGKFTKS +FRLHITAL YLAPYA++KVW+KP
Sbjct: 52 DRVYYVSEKILKLAANISGDKLVSLGTCFGKFTKSHRFRLHITALDYLAPYAKYKVWIKP 111
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 112 GAEQSFLYGNHVLKSGLGRITENTCQYQGVV 142
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 56/81 (69%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M DVPLGFGVAAKST +C+
Sbjct: 105 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTCQYQGVVVYSMADVPLGFGVAAKSTQDCR 164
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEY+R+
Sbjct: 165 KVDPMAIVVFHQADIGEYVRH 185
>UNIPROTKB|Q9Y221 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005730
GO:GO:0003723 EMBL:CH471092 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 CTD:51388 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AF132971
EMBL:AF085360 EMBL:AF161528 EMBL:AB062398 EMBL:AB062479
EMBL:AB112439 EMBL:AK315355 EMBL:BC015941 IPI:IPI00007175
IPI:IPI00020793 RefSeq:NP_001186363.1 RefSeq:NP_057185.1
UniGene:Hs.585728 PDB:1SQW PDB:1T5Y PDBsum:1SQW PDBsum:1T5Y
ProteinModelPortal:Q9Y221 SMR:Q9Y221 IntAct:Q9Y221
MINT:MINT-1472771 STRING:Q9Y221 PhosphoSite:Q9Y221 DMDM:56404676
SWISS-2DPAGE:Q9Y221 PaxDb:Q9Y221 PeptideAtlas:Q9Y221 PRIDE:Q9Y221
DNASU:51388 Ensembl:ENST00000254940 Ensembl:ENST00000254941
GeneID:51388 KEGG:hsa:51388 UCSC:uc002exa.3 UCSC:uc002exb.3
GeneCards:GC16P069373 HGNC:HGNC:24328 neXtProt:NX_Q9Y221
PharmGKB:PA142671264 InParanoid:Q9Y221 PhylomeDB:Q9Y221
ChiTaRS:NIP7 EvolutionaryTrace:Q9Y221 GenomeRNAi:51388
NextBio:54909 Bgee:Q9Y221 CleanEx:HS_NIP7 Genevestigator:Q9Y221
GermOnline:ENSG00000132603 Uniprot:Q9Y221
Length = 180
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 64/91 (70%), Positives = 79/91 (86%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSEKI+ LA N D L++LGTCFGKFTK+ KFRLH+TAL YLAPYA++KVW+KP
Sbjct: 42 DRVYYVSEKIMKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 102 GAEQSFLYGNHVLKSGLGRITENTSQYQGVV 132
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 55/81 (67%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M D+PLGFGVAAKST +C+
Sbjct: 95 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEY+R+
Sbjct: 155 KVDPMAIVVFHQADIGEYVRH 175
>ZFIN|ZDB-GENE-050522-256 [details] [associations]
symbol:nip7 "nuclear import 7 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 ZFIN:ZDB-GENE-050522-256
GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 EMBL:BC095238 IPI:IPI00607355
RefSeq:NP_001018426.1 UniGene:Dr.16108 HSSP:Q9Y221
ProteinModelPortal:Q503P2 SMR:Q503P2 STRING:Q503P2 PRIDE:Q503P2
Ensembl:ENSDART00000082087 GeneID:553616 KEGG:dre:553616 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 InParanoid:Q503P2 KO:K07565 OMA:NGEMPFL
OrthoDB:EOG45B1GK NextBio:20880353 Bgee:Q503P2 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 Uniprot:Q503P2
Length = 180
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 65/91 (71%), Positives = 79/91 (86%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+Y+SEKIL LA N D L+++GTCFGKFTK+ KFRLHITAL +LAPYA+FKVWVKP
Sbjct: 42 DRVYYMSEKILKLATNVSRDKLVSVGTCFGKFTKTQKFRLHITALDFLAPYAKFKVWVKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
++Q FLYG++I+KSGL RITENT KYQGV+
Sbjct: 102 GSEQSFLYGNHIMKSGLGRITENTDKYQGVL 132
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 58/80 (72%), Positives = 70/80 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
FKVWVKP +EQ FLYG++I+KSGL RITENT KYQGV+V +M DVPLGFGVAA++T EC+
Sbjct: 95 FKVWVKPGSEQSFLYGNHIMKSGLGRITENTDKYQGVLVYSMADVPLGFGVAARTTQECR 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
DP+AIV F+Q+DIGEYIR
Sbjct: 155 KVDPMAIVVFHQADIGEYIR 174
>MGI|MGI:1913414 [details] [associations]
symbol:Nip7 "nuclear import 7 homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
MGI:MGI:1913414 GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AK003739
EMBL:AK014290 EMBL:BC003972 IPI:IPI00133555 RefSeq:NP_079667.2
UniGene:Mm.334789 ProteinModelPortal:Q9CXK8 SMR:Q9CXK8
STRING:Q9CXK8 PhosphoSite:Q9CXK8 PaxDb:Q9CXK8 PRIDE:Q9CXK8
Ensembl:ENSMUST00000034392 GeneID:66164 KEGG:mmu:66164
UCSC:uc009ngz.2 InParanoid:Q9CXK8 NextBio:320822 Bgee:Q9CXK8
CleanEx:MM_NIP7 Genevestigator:Q9CXK8 GermOnline:ENSMUSG00000031917
Uniprot:Q9CXK8
Length = 180
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 64/91 (70%), Positives = 78/91 (85%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSE +L LA N D L++LGTCFGKFTK+ KFRLH+TAL YLAPYA++KVWVKP
Sbjct: 42 DRVYYVSEMMLKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 102 GAEQSFLYGNHVLKSGLGRITENTSQYQGVV 132
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 56/81 (69%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVWVKP AEQ FLYG+++LKSGL RITENT +YQGV+V +M D+PLGFGVAAKST +C+
Sbjct: 95 YKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEY+R+
Sbjct: 155 KVDPMAIVVFHQADIGEYVRH 175
>RGD|620069 [details] [associations]
symbol:Nip7 "NIP7, nucleolar pre-rRNA processing protein"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
RGD:620069 GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AF158186
EMBL:BC059114 EMBL:BC086589 IPI:IPI00204396 RefSeq:NP_620202.1
UniGene:Rn.127815 ProteinModelPortal:Q9WV50 SMR:Q9WV50
STRING:Q9WV50 PhosphoSite:Q9WV50 Ensembl:ENSRNOT00000027653
GeneID:192180 KEGG:rno:192180 UCSC:RGD:620069 InParanoid:Q9WV50
NextBio:622741 Genevestigator:Q9WV50 GermOnline:ENSRNOG00000020391
Uniprot:Q9WV50
Length = 180
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 63/91 (69%), Positives = 78/91 (85%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
DRV+YVSE IL LA N D L++LGTCFGKFTK+ KFRLH+TAL +LAPYA++KVW+KP
Sbjct: 42 DRVYYVSEMILKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDFLAPYAKYKVWIKP 101
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 102 GAEQSFLYGNHVLKSGLGRITENTSQYQGVV 132
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 57/81 (70%), Positives = 71/81 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M DVPLGFGVAAKST +C+
Sbjct: 95 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIRY 174
DP+AIV F+Q+DIGEYIR+
Sbjct: 155 KVDPMAIVVFHQADIGEYIRH 175
>UNIPROTKB|E1C494 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9031 "Gallus gallus" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 CTD:51388 GeneTree:ENSGT00390000003591 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:AADN02054167 IPI:IPI00600575 RefSeq:XP_414222.1
UniGene:Gga.8338 ProteinModelPortal:E1C494
Ensembl:ENSGALT00000000923 GeneID:415863 KEGG:gga:415863
NextBio:20819404 Uniprot:E1C494
Length = 180
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 62/92 (67%), Positives = 78/92 (84%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
RDRV+YVSEK+L A + D L+ALGTCFGKFTK+ KFRL +TAL +LAPYA++KVWVK
Sbjct: 41 RDRVYYVSEKLLKGAASIPRDSLVALGTCFGKFTKTQKFRLSVTALDFLAPYAKYKVWVK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P ++Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 101 PGSEQSFLYGNHVLKSGLGRITENTAQYQGVV 132
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 55/80 (68%), Positives = 70/80 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVWVKP +EQ FLYG+++LKSGL RITENT +YQGV+V +M DVPLGFGVAAKST +C+
Sbjct: 95 YKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQDCR 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
DP+AIV F+Q+D+GEY+R
Sbjct: 155 KVDPMAIVVFHQADVGEYVR 174
>FB|FBgn0039233 [details] [associations]
symbol:CG7006 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042255 "ribosome assembly"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 EMBL:AE014297 GO:GO:0005634
GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
eggNOG:COG1374 GeneTree:ENSGT00390000003591 KO:K07565 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AY075367
RefSeq:NP_651296.1 UniGene:Dm.5514 SMR:Q9VC28 MINT:MINT-749224
STRING:Q9VC28 EnsemblMetazoa:FBtr0084704 GeneID:42963
KEGG:dme:Dmel_CG7006 UCSC:CG7006-RA FlyBase:FBgn0039233
InParanoid:Q9VC28 OrthoDB:EOG47SQWX GenomeRNAi:42963 NextBio:831550
Uniprot:Q9VC28
Length = 180
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 60/92 (65%), Positives = 76/92 (82%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+DRV+YVSE+IL L+E FG L+ +GTCFGKF+K+ K + HITAL YLAPYAQ+KVWVK
Sbjct: 41 KDRVYYVSERILKLSECFGYKQLVCVGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P +QQFLYG++I K+GL RITEN +YQGV+
Sbjct: 101 PSFEQQFLYGNHIPKTGLGRITENAGQYQGVV 132
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 55/80 (68%), Positives = 67/80 (83%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVWVKP EQQFLYG++I K+GL RITEN +YQGV+V +MND+PLGFGV A+ST +CK
Sbjct: 95 YKVWVKPSFEQQFLYGNHIPKTGLGRITENAGQYQGVVVYSMNDLPLGFGVLARSTTDCK 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
ADP+ V F+QSDIGEYIR
Sbjct: 155 TADPMTTVCFHQSDIGEYIR 174
>WB|WBGene00016607 [details] [associations]
symbol:C43E11.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0071688 GO:GO:0003723 GO:GO:0040035 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 EMBL:FO080612
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
PIR:D87754 RefSeq:NP_491342.1 ProteinModelPortal:P91154 SMR:P91154
IntAct:P91154 STRING:P91154 PaxDb:P91154 EnsemblMetazoa:C43E11.9.1
EnsemblMetazoa:C43E11.9.2 GeneID:172028 KEGG:cel:CELE_C43E11.9
UCSC:C43E11.9.1 CTD:172028 WormBase:C43E11.9 InParanoid:P91154
NextBio:873731 Uniprot:P91154
Length = 180
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 55/92 (59%), Positives = 72/92 (78%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
++RV+Y SE ++ A + LL+ GTC GKFTKS KF L ITAL YLAPYA+FKVW+K
Sbjct: 41 KERVYYCSENLMRQAACIAREPLLSFGTCLGKFTKSKKFHLQITALDYLAPYAKFKVWLK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P A+QQFLYG+NILKSG+AR+T+ TP + G++
Sbjct: 101 PNAEQQFLYGNNILKSGIARMTDGTPTHAGIV 132
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 51/80 (63%), Positives = 67/80 (83%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
FKVW+KP AEQQFLYG+NILKSG+AR+T+ TP + G++V +M DVPLGFGV+AK T++ K
Sbjct: 95 FKVWLKPNAEQQFLYGNNILKSGIARMTDGTPTHAGIVVYSMTDVPLGFGVSAKGTSDSK 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
ADP A+V +Q D+GEY+R
Sbjct: 155 RADPTALVVLHQCDLGEYLR 174
>DICTYBASE|DDB_G0295477 [details] [associations]
symbol:nip7 "60S ribosome subunit biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 dictyBase:DDB_G0295477 GO:GO:0005730
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
GO:GO:0042273 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
KO:K07565 OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4
Pfam:PF03657 RefSeq:XP_001732966.1 ProteinModelPortal:B0G104
SMR:B0G104 STRING:B0G104 EnsemblProtists:DDB0235213 GeneID:8618043
KEGG:ddi:DDB_G0295477 ProtClustDB:CLSZ2428891 Uniprot:B0G104
Length = 179
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 50/92 (54%), Positives = 76/92 (82%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+++V+YVSE+++ ++N + L +LGTCFG+FTK+GKF+L+IT L YLA YA++KVWVK
Sbjct: 41 KNKVYYVSEELMKRSQNIPREGLCSLGTCFGRFTKTGKFKLNITCLDYLAQYAKYKVWVK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P ++ ++YG+N+LK+GL RITE+TP QGV+
Sbjct: 101 PSSEMSWMYGNNLLKAGLGRITEDTPANQGVV 132
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 46/80 (57%), Positives = 65/80 (81%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+KVWVKP +E ++YG+N+LK+GL RITE+TP QGV++ +MNDVP+GFGV +KST EC+
Sbjct: 95 YKVWVKPSSEMSWMYGNNLLKAGLGRITEDTPANQGVVLFSMNDVPIGFGVTSKSTHECR 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
DP A+V ++ D+GEY+R
Sbjct: 155 KLDPQALVVYHYGDVGEYLR 174
>POMBASE|SPCC320.11c [details] [associations]
symbol:SPCC320.11c "RNA-binding protein involved in
ribosome biogenesis (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=IEA] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 PomBase:SPCC320.11c
GO:GO:0005829 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
PIR:T41300 RefSeq:NP_587718.1 ProteinModelPortal:Q1MTQ9 SMR:Q1MTQ9
STRING:Q1MTQ9 EnsemblFungi:SPCC320.11c.1 GeneID:2539255
KEGG:spo:SPCC320.11c OrthoDB:EOG4SBJ77 NextBio:20800425
Uniprot:Q1MTQ9
Length = 180
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 49/92 (53%), Positives = 74/92 (80%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+DRV+YVSE+ + +A + +L++LG CFGKFTK+ KFRLHITAL Y+A YA++K+WVK
Sbjct: 41 KDRVYYVSERAMKMATSVARQNLMSLGICFGKFTKTNKFRLHITALDYIAQYARYKIWVK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
+ FLYG+++LK+ + RIT++TP++QGV+
Sbjct: 101 SNGEMPFLYGNHVLKAHVGRITDDTPQHQGVV 132
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 43/80 (53%), Positives = 64/80 (80%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+K+WVK E FLYG+++LK+ + RIT++TP++QGV++ +MND PLGFGV A+ST E +
Sbjct: 95 YKIWVKSNGEMPFLYGNHVLKAHVGRITDDTPQHQGVVIYSMNDTPLGFGVTARSTLELR 154
Query: 154 LADPLAIVGFNQSDIGEYIR 173
+P AIV F+Q+D+GEY+R
Sbjct: 155 RLEPTAIVAFHQADVGEYLR 174
>CGD|CAL0005065 [details] [associations]
symbol:NIP7 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PROSITE:PS50890 SMART:SM00359
CGD:CAL0005065 GO:GO:0005634 GO:GO:0003723 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
eggNOG:COG1374 KO:K07565 InterPro:IPR005155 PANTHER:PTHR23415:SF4
Pfam:PF03657 RefSeq:XP_712517.1 RefSeq:XP_712547.1
ProteinModelPortal:Q59S61 SMR:Q59S61 STRING:Q59S61 GeneID:3645855
GeneID:3645880 KEGG:cal:CaO19.10982 KEGG:cal:CaO19.3478
Uniprot:Q59S61
Length = 262
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 48/92 (52%), Positives = 70/92 (76%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+DRV+YV E I A + L++LGTCFGKFTK+GKFRLHIT+L YLA YA+FK+W+K
Sbjct: 122 KDRVYYVQESIAKFATSVSRQQLMSLGTCFGKFTKTGKFRLHITSLPYLAQYAKFKIWIK 181
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
+ FLYG+++LK+ + R++++ P++ GVI
Sbjct: 182 QNGEMPFLYGNHVLKAHIGRMSDDIPEHAGVI 213
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 55/139 (39%), Positives = 81/139 (58%)
Query: 40 FRLHITALSYLAP-YAQFKVWVKPQADQQF--LYGHNILKSGLARITENTPKY--QGVIF 94
FRL + Y+ A+F V Q +G K+G R+ + Y Q F
Sbjct: 118 FRLQKDRVYYVQESIAKFATSVSRQQLMSLGTCFG-KFTKTGKFRLHITSLPYLAQYAKF 176
Query: 95 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKL 154
K+W+K E FLYG+++LK+ + R++++ P++ GVI+ +MND+PLGFG +AKSTAE +
Sbjct: 177 KIWIKQNGEMPFLYGNHVLKAHIGRMSDDIPEHAGVIIYSMNDIPLGFGASAKSTAEARN 236
Query: 155 ADPLAIVGFNQSDIGEYIR 173
P IV F Q DIGEY+R
Sbjct: 237 LPPTGIVAFRQGDIGEYLR 255
>UNIPROTKB|G4NBT8 [details] [associations]
symbol:MGG_00482 "60S ribosome subunit biogenesis protein
NIP7" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
EMBL:CM001235 GO:GO:0003723 GO:GO:0042273 GO:GO:0030687
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255 KO:K07565
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
RefSeq:XP_003718580.1 ProteinModelPortal:G4NBT8 SMR:G4NBT8
EnsemblFungi:MGG_00482T0 GeneID:2674100 KEGG:mgr:MGG_00482
Uniprot:G4NBT8
Length = 185
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 46/92 (50%), Positives = 67/92 (72%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+DRV+YV I LA D L++LGTC GKFTKSGKFRLHITAL L+ +A++K+WV+
Sbjct: 43 KDRVYYVKLSIANLATTIARDKLMSLGTCLGKFTKSGKFRLHITALPILSEHARYKMWVR 102
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
+ FLYG N++K+ + R T++ P++QG++
Sbjct: 103 SNGEMPFLYGGNVVKAHVGRQTDDCPEHQGIV 134
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECK 153
+K+WV+ E FLYG N++K+ + R T++ P++QG++V NM DVPLGFG+ AKSTA+ +
Sbjct: 97 YKMWVRSNGEMPFLYGGNVVKAHVGRQTDDCPEHQGIVVYNMQDVPLGFGLTAKSTADAR 156
Query: 154 LADPLAIVGFNQSDIGEYIR 173
DP I F QSD GEY+R
Sbjct: 157 RLDPTGITCFRQSDCGEYLR 176
>SGD|S000006132 [details] [associations]
symbol:NIP7 "Nucleolar protein required for 60S ribosome
subunit biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0042255 "ribosome assembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;TAS] [GO:0000027 "ribosomal large subunit
assembly" evidence=TAS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
SGD:S000006132 GO:GO:0005730 GO:GO:0003723 EMBL:BK006949
GO:GO:0030687 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0006364
GO:GO:0000027 eggNOG:COG1374 GO:GO:0022625
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
OrthoDB:EOG4SBJ77 EMBL:Z73567 EMBL:AY558059 PIR:S65230
RefSeq:NP_015113.1 ProteinModelPortal:Q08962 SMR:Q08962
DIP:DIP-1456N IntAct:Q08962 MINT:MINT-400883 STRING:Q08962
PaxDb:Q08962 PeptideAtlas:Q08962 EnsemblFungi:YPL211W GeneID:855890
KEGG:sce:YPL211W CYGD:YPL211w NextBio:980562 Genevestigator:Q08962
GermOnline:YPL211W Uniprot:Q08962
Length = 181
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 42/92 (45%), Positives = 71/92 (77%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
+DRV+YV + + LA + +L++LG C GKFTK+GKFRLHIT+L+ LA +A++K+W+K
Sbjct: 41 KDRVYYVPDHVAKLATSVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P + FLYG+++LK+ + +++++ P++ GVI
Sbjct: 101 PNGEMPFLYGNHVLKAHVGKMSDDIPEHAGVI 132
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 48/100 (48%), Positives = 70/100 (70%)
Query: 76 KSGLAR--ITENTPKYQGVIFKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVL 133
K+G R IT T + +K+W+KP E FLYG+++LK+ + +++++ P++ GVIV
Sbjct: 75 KTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNHVLKAHVGKMSDDIPEHAGVIVF 134
Query: 134 NMNDVPLGFGVAAKSTAECKLADPLAIVGFNQSDIGEYIR 173
MNDVPLGFGV+AKST+E + P IV F Q+DIGEY+R
Sbjct: 135 AMNDVPLGFGVSAKSTSESRNMQPTGIVAFRQADIGEYLR 174
>TAIR|locus:2130704 [details] [associations]
symbol:AT4G15770 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:BT012125
IPI:IPI00519189 RefSeq:NP_193312.5 UniGene:At.33143
ProteinModelPortal:Q6NM52 SMR:Q6NM52 STRING:Q6NM52 PRIDE:Q6NM52
EnsemblPlants:AT4G15770.1 GeneID:827257 KEGG:ath:AT4G15770
TAIR:At4g15770 InParanoid:Q6NM52 PhylomeDB:Q6NM52
ProtClustDB:CLSN2697002 Genevestigator:Q6NM52 Uniprot:Q6NM52
Length = 187
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 45/79 (56%), Positives = 61/79 (77%)
Query: 95 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKL 154
KVW+KP +E FLYG+++LK GL RIT++ GV+V +M+DVPLGFG+AAKST +C+
Sbjct: 104 KVWLKPTSEMSFLYGNHVLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRK 163
Query: 155 ADPLAIVGFNQSDIGEYIR 173
DP IV +Q+DIGEY+R
Sbjct: 164 LDPNGIVVLHQADIGEYLR 182
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 41/92 (44%), Positives = 63/92 (68%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
++RV+YVSE ++ A N +L++ GTC GK+T +G F L I +L+ LA A+ KVW+K
Sbjct: 49 KNRVYYVSEALVKRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLK 108
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
P ++ FLYG+++LK GL RIT++ GV+
Sbjct: 109 PTSEMSFLYGNHVLKGGLGRITDSIVPGDGVV 140
>UNIPROTKB|J3QRR4 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PROSITE:PS50890 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255 EMBL:AC026464
PANTHER:PTHR23415:SF4 HGNC:HGNC:24328 ChiTaRS:NIP7
Ensembl:ENST00000567202 Uniprot:J3QRR4
Length = 79
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 41/58 (70%), Positives = 52/58 (89%)
Query: 36 KSGKFRLHITALSYLAPYAQFKVWVKPQADQQFLYGHNILKSGLARITENTPKYQGVI 93
K+ KFRLH+TAL YLAPYA++KVW+KP A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 2 KTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVV 59
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFG 143
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M D+PL G
Sbjct: 22 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLTLG 71
>UNIPROTKB|J3QRD6 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
InterPro:IPR016686 GO:GO:0005634 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 EMBL:AC026464 PANTHER:PTHR23415:SF4 HGNC:HGNC:24328
ChiTaRS:NIP7 Ensembl:ENST00000562523 Uniprot:J3QRD6
Length = 70
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 40/55 (72%), Positives = 50/55 (90%)
Query: 39 KFRLHITALSYLAPYAQFKVWVKPQADQQFLYGHNILKSGLARITENTPKYQGVI 93
KFRLH+TAL YLAPYA++KVW+KP A+Q FLYG+++LKSGL RITENT +YQGV+
Sbjct: 3 KFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVV 57
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 94 FKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPL 140
+KVW+KP AEQ FLYG+++LKSGL RITENT +YQGV+V +M D+PL
Sbjct: 20 YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPL 66
>ASPGD|ASPL0000028016 [details] [associations]
symbol:AN8491 species:162425 "Emericella nidulans"
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 EMBL:BN001305 GO:GO:0042273
GO:GO:0030687 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
EMBL:AACD01000153 eggNOG:COG1374 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
OrthoDB:EOG4SBJ77 RefSeq:XP_681760.1 ProteinModelPortal:Q5AT89
STRING:Q5AT89 EnsemblFungi:CADANIAT00002979 GeneID:2868792
KEGG:ani:AN8491.2 Uniprot:Q5AT89
Length = 188
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 43/91 (47%), Positives = 60/91 (65%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVKP 62
+RV+Y I A F D LL+LG C GKFTK+GKFRLHITAL +A +A+ K+W+KP
Sbjct: 47 NRVYYSLLSIANAATAFPRDQLLSLGICMGKFTKTGKFRLHITALPIIAEHARNKIWIKP 106
Query: 63 QADQQFLYGHNILKSGLARITENTPKYQGVI 93
FLYG N+ K+ +A++ + ++ GVI
Sbjct: 107 NGVMPFLYGSNVAKAHVAKLPDEMAEHSGVI 137
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 95 KVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKSTAECKL 154
K+W+KP FLYG N+ K+ +A++ + ++ GVIV +DVPLGFG+ A+STAE +
Sbjct: 101 KIWIKPNGVMPFLYGSNVAKAHVAKLPDEMAEHSGVIVCTQDDVPLGFGITARSTAEARR 160
Query: 155 ADPLAIVGFNQSDIGEYIR 173
DP IV F Q+D GEY+R
Sbjct: 161 LDPTGIVCFRQADCGEYLR 179
>GENEDB_PFALCIPARUM|PF14_0635 [details] [associations]
symbol:PF14_0635 "RNA binding protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0003723 EMBL:AE014187 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 ProtClustDB:CLSZ2428891
RefSeq:XP_001348809.2 ProteinModelPortal:Q8IKH0
EnsemblProtists:PF14_0635:mRNA GeneID:812217 KEGG:pfa:PF14_0635
EuPathDB:PlasmoDB:PF3D7_1466700 Uniprot:Q8IKH0
Length = 179
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 90 QGVIFKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKST 149
Q I K+W+K E+ FL+G+N+LKS L +I++N K G++VL+MND P+GFG++ ++T
Sbjct: 91 QFCIHKIWLKESGEKNFLFGNNVLKSHLLKISDNIKKGDGIMVLSMNDNPIGFGISVRNT 150
Query: 150 AECKLADPLAIVGFNQSDIGEYIRYMT 176
+ K+ + V +QSDIGEY+R T
Sbjct: 151 QDIKILNVTDTVLIHQSDIGEYLRCET 177
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
R V++V + AE+ + L+++G C GKFTK+ F + ITA+S+L + K+W+K
Sbjct: 41 RSNVYFVRADVAKQAESLNKNSLISMGICLGKFTKTNNFFIKITAISFLNQFCIHKIWLK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
++ FL+G+N+LKS L +I++N K G++
Sbjct: 101 ESGEKNFLFGNNVLKSHLLKISDNIKKGDGIM 132
>UNIPROTKB|Q8IKH0 [details] [associations]
symbol:PF14_0635 "60S ribosome subunit biogenesis protein
NIP7 homolog" species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0003723 EMBL:AE014187 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 ProtClustDB:CLSZ2428891
RefSeq:XP_001348809.2 ProteinModelPortal:Q8IKH0
EnsemblProtists:PF14_0635:mRNA GeneID:812217 KEGG:pfa:PF14_0635
EuPathDB:PlasmoDB:PF3D7_1466700 Uniprot:Q8IKH0
Length = 179
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 90 QGVIFKVWVKPQAEQQFLYGHNILKSGLARITENTPKYQGVIVLNMNDVPLGFGVAAKST 149
Q I K+W+K E+ FL+G+N+LKS L +I++N K G++VL+MND P+GFG++ ++T
Sbjct: 91 QFCIHKIWLKESGEKNFLFGNNVLKSHLLKISDNIKKGDGIMVLSMNDNPIGFGISVRNT 150
Query: 150 AECKLADPLAIVGFNQSDIGEYIRYMT 176
+ K+ + V +QSDIGEY+R T
Sbjct: 151 QDIKILNVTDTVLIHQSDIGEYLRCET 177
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 2 RDRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQFKVWVK 61
R V++V + AE+ + L+++G C GKFTK+ F + ITA+S+L + K+W+K
Sbjct: 41 RSNVYFVRADVAKQAESLNKNSLISMGICLGKFTKTNNFFIKITAISFLNQFCIHKIWLK 100
Query: 62 PQADQQFLYGHNILKSGLARITENTPKYQGVI 93
++ FL+G+N+LKS L +I++N K G++
Sbjct: 101 ESGEKNFLFGNNVLKSHLLKISDNIKKGDGIM 132
>UNIPROTKB|J3QLW7 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
InterPro:IPR016686 GO:GO:0005634 GO:GO:0042255 EMBL:AC026464
PANTHER:PTHR23415:SF4 HGNC:HGNC:24328 ChiTaRS:NIP7
ProteinModelPortal:J3QLW7 Ensembl:ENST00000569637 Uniprot:J3QLW7
Length = 110
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 3 DRVFYVSEKILTLAENFGPDHLLALGTCFGKFTKSGKFRLHITALSYLAPYAQ 55
DRV+YVSEKI+ LA N D L++LGTCFGKFTK+ KFRLH+TAL YLAPYA+
Sbjct: 42 DRVYYVSEKIMKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAK 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 180 180 0.00092 109 3 11 22 0.39 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 587 (62 KB)
Total size of DFA: 152 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.82u 0.10s 14.92t Elapsed: 00:00:02
Total cpu time: 14.83u 0.10s 14.93t Elapsed: 00:00:04
Start: Thu Aug 15 17:06:41 2013 End: Thu Aug 15 17:06:45 2013