BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8681
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 242/449 (53%), Gaps = 98/449 (21%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE++ + + ARKVYERAVEFFG+E++DE L++AFAKFEE Q+E
Sbjct: 385 FEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 444
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEHERA------------------ 188
K+GDR GIED+IVSKR+FQYEE +A
Sbjct: 445 KQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESD 504
Query: 189 ------RVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNS 242
R +Y+ A+ ++P + +K Y Y +E + + Y+ +
Sbjct: 505 AEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLEL 564
Query: 243 NPNN----YDAWFDYLRLLEDEGNADLIRETYERAIANIPP------------------- 279
P+ W Y + + N L R +I P
Sbjct: 565 IPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDR 624
Query: 280 -------------------TKFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYID 320
KFAELE++LGD++RARAIYELAISQPRLDMPE++WK+YID
Sbjct: 625 CRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYID 684
Query: 321 FEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKA 380
FE+ Q E ++ R L+ RLL+RT HVKVW+++AQFE+SSG E S++ R+++E AN+ ++
Sbjct: 685 FEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRN 744
Query: 381 SSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDY 440
EKEER+MLLE+W+ FE + G + +++ +P + KKR K D+G + GWEE FDY
Sbjct: 745 CEEKEERLMLLESWRSFEEEFGTASDKERVDKLMPEKVKKRRKVQTDDGSDAGWEEYFDY 804
Query: 441 IFPEDEAAKPNLKLLEKAKAWKKAMEEKQ 469
IFPED A +PNLKLL AK WKK +EK+
Sbjct: 805 IFPEDAANQPNLKLLAMAKLWKKQQQEKE 833
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 242/493 (49%), Gaps = 124/493 (25%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGW----EEVFDYIFPEDEAAKPNLK-- 54
VKNKAPAE+QITAEQLLREAKER+LE++PP + EE+ DY + + + N++
Sbjct: 179 VKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKN 238
Query: 55 --LLE---KAKAWKKAMEEKQGNKIGEEGA------NKENEEEERDKERDREEEDERKDE 103
++ K W+++++E Q + E A N + + E + + ++
Sbjct: 239 RTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNI 298
Query: 104 GDRDSDTT-----YGMRELVFEEQNGFVSGARKVYERAVEFFGEE--------------- 143
DR T + + EE G V+GAR+V+ER +E+ EE
Sbjct: 299 WDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKE 358
Query: 144 --------------NLDEKLFIAFAKFEEGQR-------------EKYGDRAGIEDVIVS 176
+ D K +I +A+FEE E +GD E + V+
Sbjct: 359 VDRARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVA 418
Query: 177 KRKFQ--YEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
KF+ +E ER RVIYKYALD I K E++K YTI EKK+GDR GIED+IVSKR+F
Sbjct: 419 FAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRF 478
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK------------- 281
QYEEEV +NP+NYDAWFDYLRL+E + A+ +RE YERAIAN+PP +
Sbjct: 479 QYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWI 538
Query: 282 ----FAELESLLGDMERARAIYELA----------------------ISQPRLDMPEL-- 313
+ ELE+ D ER R +Y+ + I Q L +
Sbjct: 539 NYALYEELEA--KDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRAL 596
Query: 314 -----------VWKAYIDFEVGQGERDKVRELHERLLERTV-HVKVWMNYAQFEMSSGDE 361
++K YI+ E+ E D+ R+L+E+ LE + W+ +A+ E GD
Sbjct: 597 GTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDI 656
Query: 362 DSVSLARRVFERA 374
D AR ++E A
Sbjct: 657 DR---ARAIYELA 666
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 29/37 (78%)
Query: 34 GWEEVFDYIFPEDEAAKPNLKLLEKAKAWKKAMEEKQ 70
GWEE FDYIFPED A +PNLKLL AK WKK +EK+
Sbjct: 797 GWEEYFDYIFPEDAANQPNLKLLAMAKLWKKQQQEKE 833
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 252/453 (55%), Gaps = 104/453 (22%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE++ + + ARKVYERAVEFFG+E++DE L++AFAKFEE Q+E
Sbjct: 224 FEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 283
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEHERA------------------ 188
K+GDR GIED+IVSKR+FQYEE +A
Sbjct: 284 KQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESD 343
Query: 189 ------RVIYKYALDHIPK-------DRTAEIYKAYTIHE---------KKYGDRAGIED 226
R +Y+ A+ ++P R ++ Y ++E + +A +E
Sbjct: 344 AEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLE- 402
Query: 227 VIVSKRKFQYEE------------------------EVNSNPNNYDAWFDYLRLLEDEGN 262
++ +KF + + + P N + Y+ L
Sbjct: 403 -LIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLRE 460
Query: 263 ADLIRETYERAIANIPP-----TKFAELESLLGDMERARAIYELAISQPRLDMPELVWKA 317
D R+ YE+ + P KFAELE++LGD+ERARAIYELAISQPRLDMPE++WK+
Sbjct: 461 FDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKS 520
Query: 318 YIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQA 377
YIDFE+ Q E ++ R L+ +LL+RT HVKVW+++AQFE+SSG E SV+ R+++E AN+
Sbjct: 521 YIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKT 580
Query: 378 LKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEV 437
++ EKEER+MLLE+W+ FE + G + +++ +P + KKR K D+G + GWEE
Sbjct: 581 MRNCEEKEERLMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEY 640
Query: 438 FDYIFPEDEAAKPNLKLLEKAKAWKKAMEEKQG 470
+DYIFPED A +PNLKLL AK WKK +E++
Sbjct: 641 YDYIFPEDAANQPNLKLLAMAKLWKKQQQEREA 673
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 240/493 (48%), Gaps = 124/493 (25%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGW----EEVFDYIFPEDEAAKPNLKL- 55
VKNKAPAE+QITAEQLLREAKER+LE++PP + EE+ DY + + + N++
Sbjct: 18 VKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKN 77
Query: 56 ------LEKAKAWKKAMEEKQGNKIGEEGA------NKENEEEERDKERDREEEDERKDE 103
K W+++++E Q + E A N + + E + + ++
Sbjct: 78 RTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNI 137
Query: 104 GDRDSDTT-----YGMRELVFEEQNGFVSGARKVYERAVEFFGEE--------------- 143
DR T + + EE G V+GAR+V+ER +E+ EE
Sbjct: 138 WDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKE 197
Query: 144 -----NLDEKL---------FIAFAKFEEGQR-------------EKYGDRAGIEDVIVS 176
+ E+ +I +A+FEE E +GD E + V+
Sbjct: 198 VERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVA 257
Query: 177 KRKFQ--YEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
KF+ +E ER RVIYKYALD I K E++K YTI EKK+GDR GIED+IVSKR+F
Sbjct: 258 FAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRF 317
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK------------- 281
QYEEEV +NP+NYDAWFDYLRL+E + AD +RE YERAIAN+PP +
Sbjct: 318 QYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWV 377
Query: 282 ----FAELESLLGDMERARAIYELA---ISQPRLDMPEL--------------------- 313
+ ELE+ D ER R +Y+ + I + ++
Sbjct: 378 NYALYEELEA--KDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRAL 435
Query: 314 -----------VWKAYIDFEVGQGERDKVRELHERLLERTV-HVKVWMNYAQFEMSSGDE 361
++K YI+ E+ E D+ R+L+E+ LE + W+ +A+ E GD
Sbjct: 436 GTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD- 494
Query: 362 DSVSLARRVFERA 374
+ AR ++E A
Sbjct: 495 --IERARAIYELA 505
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 34 GWEEVFDYIFPEDEAAKPNLKLLEKAKAWKKAMEEKQG 71
GWEE +DYIFPED A +PNLKLL AK WKK +E++
Sbjct: 636 GWEEYYDYIFPEDAANQPNLKLLAMAKLWKKQQQEREA 673
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 252/453 (55%), Gaps = 104/453 (22%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE++ + + ARKVYERAVEFFG+E++DE L++AFAKFEE Q+E
Sbjct: 224 FEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 283
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEHERA------------------ 188
K+GDR GIED+IVSKR+FQYEE +A
Sbjct: 284 KQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESD 343
Query: 189 ------RVIYKYALDHIPK-------DRTAEIYKAYTIHE---------KKYGDRAGIED 226
R +Y+ A+ ++P R ++ Y ++E + +A +E
Sbjct: 344 AEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLE- 402
Query: 227 VIVSKRKFQYEE------------------------EVNSNPNNYDAWFDYLRLLEDEGN 262
++ +KF + + + P N + Y+ L
Sbjct: 403 -LIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLRE 460
Query: 263 ADLIRETYERAIANIPP-----TKFAELESLLGDMERARAIYELAISQPRLDMPELVWKA 317
D R+ YE+ + P KFAELE++LGD+ERARAIYELAISQPRLDMPE++WK+
Sbjct: 461 FDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKS 520
Query: 318 YIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQA 377
YIDFE+ Q E ++ R L+ +LL+RT HVKVW+++AQFE+SSG E SV+ R+++E AN+
Sbjct: 521 YIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKT 580
Query: 378 LKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEV 437
++ EKEER+MLLE+W+ FE + G + +++ +P + KKR K D+G + GWEE
Sbjct: 581 MRNCEEKEERLMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEY 640
Query: 438 FDYIFPEDEAAKPNLKLLEKAKAWKKAMEEKQG 470
+DYIFPED A +PNLKLL AK WKK +E++
Sbjct: 641 YDYIFPEDAANQPNLKLLAMAKLWKKQQQEREA 673
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 240/493 (48%), Gaps = 124/493 (25%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGW----EEVFDYIFPEDEAAKPNLKL- 55
VKNKAPAE+QITAEQLLREAKER+LE++PP + EE+ DY + + + N++
Sbjct: 18 VKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKN 77
Query: 56 ------LEKAKAWKKAMEEKQGNKIGEEGA------NKENEEEERDKERDREEEDERKDE 103
K W+++++E Q + E A N + + E + + ++
Sbjct: 78 RTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNI 137
Query: 104 GDRDSDTT-----YGMRELVFEEQNGFVSGARKVYERAVEFFGEE--------------- 143
DR T + + EE G V+GAR+V+ER +E+ EE
Sbjct: 138 WDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKE 197
Query: 144 -----NLDEKL---------FIAFAKFEEGQR-------------EKYGDRAGIEDVIVS 176
+ E+ +I +A+FEE E +GD E + V+
Sbjct: 198 VERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVA 257
Query: 177 KRKFQ--YEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
KF+ +E ER RVIYKYALD I K E++K YTI EKK+GDR GIED+IVSKR+F
Sbjct: 258 FAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRF 317
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK------------- 281
QYEEEV +NP+NYDAWFDYLRL+E + AD +RE YERAIAN+PP +
Sbjct: 318 QYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWV 377
Query: 282 ----FAELESLLGDMERARAIYELA---ISQPRLDMPEL--------------------- 313
+ ELE+ D ER R +Y+ + I + ++
Sbjct: 378 NYALYEELEA--KDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRAL 435
Query: 314 -----------VWKAYIDFEVGQGERDKVRELHERLLERTV-HVKVWMNYAQFEMSSGDE 361
++K YI+ E+ E D+ R+L+E+ LE + W+ +A+ E GD
Sbjct: 436 GTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD- 494
Query: 362 DSVSLARRVFERA 374
+ AR ++E A
Sbjct: 495 --IERARAIYELA 505
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 34 GWEEVFDYIFPEDEAAKPNLKLLEKAKAWKKAMEEKQG 71
GWEE +DYIFPED A +PNLKLL AK WKK +E++
Sbjct: 636 GWEEYYDYIFPEDAANQPNLKLLAMAKLWKKQQQEREA 673
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 238/474 (50%), Gaps = 155/474 (32%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKR 178
FEE +GF+ G+R+V+ERAVEFFG++ ++E+LFIAFA+FEEGQ+E
Sbjct: 219 FEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKE---------------- 262
Query: 179 KFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
H+RAR+IYKYALDH+PKDRT E++KAYT HEKKYGDRAGIEDVIVSKRK+QYE+
Sbjct: 263 ------HDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQ 316
Query: 239 EVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP--------------TKFAE 284
EV +NP NYDAWFDYLRL+E EG+ D IRETYERAI+N+PP +A
Sbjct: 317 EVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYAL 376
Query: 285 LESLLG-DMERARAIYELAI-----------------SQPRLDMPEL------------- 313
E L D ER R IY+ + +Q + EL
Sbjct: 377 YEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGM 436
Query: 314 -----VWKAYIDFEVGQGERDKVRELHERLLERTV-HVKVWMNYAQFEMSSGDEDSVSLA 367
+++ YID E+ E ++ R L+E+ LE + WM +A+ E GD D A
Sbjct: 437 CPRDKLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDR---A 493
Query: 368 RRVFERANQALK----------------ASSEKE----------ERVMLLEAWKEFE--- 398
R +FE A Q + A E E ER ++ W F
Sbjct: 494 RAIFELAVQQPRLDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMSFAKFE 553
Query: 399 --AQHGDDESRAKLNSKLPRR--------------------------------------- 417
HGD A+LN +L RR
Sbjct: 554 MGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWRDFERDASDSQEMQ 613
Query: 418 ---------AKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNLKLLEKAKAWK 462
KKR K +D GVEEGWEEVFDYIFPEDE A+PNLKLL AK WK
Sbjct: 614 KVMDKMPRRIKKRQKIVSDNGVEEGWEEVFDYIFPEDEMARPNLKLLAAAKMWK 667
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 8 EIQITAEQLLREAKERDLEIVP--PVEEGWEEVFDYIFPEDEAAKPNLKLLEKAKAWK 63
E+Q +++ R K+R +IV VEEGWEEVFDYIFPEDE A+PNLKLL AK WK
Sbjct: 611 EMQKVMDKMPRRIKKRQ-KIVSDNGVEEGWEEVFDYIFPEDEMARPNLKLLAAAKMWK 667
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 218/462 (47%), Gaps = 122/462 (26%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE+ G R+VY A+E GE+ +DEKLFIA+AKFE +E
Sbjct: 215 FEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIAYAKFEAKLKEYERARAIYKYALDRLP 274
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEH--------------------- 185
++GDR G+EDVI+SKR+ QYEE
Sbjct: 275 RSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLKENPRNYDVWFDFARLEETS 334
Query: 186 ---ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNS 242
+R R IY+ A+ IP + ++ Y Y +E V + + Y E +
Sbjct: 335 GDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKL 394
Query: 243 NPNNYDAWFDYLRLLEDE-----------------------------GNADL-------- 265
P+ F + LL+ + G DL
Sbjct: 395 IPHKKFT-FAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFV 453
Query: 266 -IRETYERAIANIPP-----TKFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYI 319
R YE+ I P K+AELE L D ERARAI+EL I QP LDMPELVWKAYI
Sbjct: 454 RCRTLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIFELGIDQPMLDMPELVWKAYI 513
Query: 320 DFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSG----------------DEDS 363
DFE +GE D+VR+L+ERLL++T HVKVW+NYA+FE++ +++
Sbjct: 514 DFEEYEGEYDRVRQLYERLLQKTDHVKVWINYARFEINVPEEEEEEEEEEEEERPVSDEA 573
Query: 364 VSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVK 423
AR VFERA++ K KEERV LL AW+ FE HG E K+ ++PRR KKR K
Sbjct: 574 KRRARAVFERAHKVFKEKEMKEERVELLNAWRAFEHTHGSPEDIKKIEEQMPRRVKKRRK 633
Query: 424 TYNDEGVEEGWEEVFDYIFPEDEAAKPNL-KLLEKAKAWKKA 464
+D +EE DY+FP D+ A +L K+L+ A WK+
Sbjct: 634 LDDDR-----YEEYMDYVFPADDQAAASLTKILQAAHRWKQT 670
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 169/358 (47%), Gaps = 102/358 (28%)
Query: 112 YGMRELVFEEQNGFVSGARKVYERAVEF-----------------------------FGE 142
+ + + EE G + G R+V+ER + + F
Sbjct: 142 FWYKYVYMEETLGNIQGTRQVFERWMSWEPDEGAWSAYIKLEKRYNEFERARAIFQRFTI 201
Query: 143 ENLDEKLFIAFAKFEE------GQREKYGDRAGIED---------VIVSKRKF--QYEEH 185
+ + + +I +A+FEE RE YG IE + ++ KF + +E+
Sbjct: 202 VHPEPRNWIKWARFEEEYGTSDLVREVYG--MAIETLGEDFMDEKLFIAYAKFEAKLKEY 259
Query: 186 ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPN 245
ERAR IYKYALD +P+ + ++KAYT EK++GDR G+EDVI+SKR+ QYEE++ NP
Sbjct: 260 ERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLKENPR 319
Query: 246 NYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK--------------FAELESL-LG 290
NYD WFD+ RL E G+ D +R+ YERAIA IPP++ +A E +
Sbjct: 320 NYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAK 379
Query: 291 DMERARAIY---------------ELAISQPRLDMPEL--------------------VW 315
D++RAR IY ++ + + + D+ ++ ++
Sbjct: 380 DVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLF 439
Query: 316 KAYIDFEVGQGERDKVRELHERLLE-RTVHVKVWMNYAQFEMSSGDEDSVSLARRVFE 372
+ YID E E + R L+E+ +E + + W+ YA+ E D + AR +FE
Sbjct: 440 RGYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLDDSER---ARAIFE 494
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-----KFAELESLLG 290
+E ++ NP + W Y+ N + R +RA+ +P K+ +E LG
Sbjct: 95 FERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKFWYKYVYMEETLG 154
Query: 291 DMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMN 350
+++ R ++E +S + E W AYI E E ++ R + +R + W+
Sbjct: 155 NIQGTRQVFERWMS---WEPDEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEPRNWIK 211
Query: 351 YAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQ 400
+A+FE G D L R V+ A + L E+ L A+ +FEA+
Sbjct: 212 WARFEEEYGTSD---LVREVYGMAIETLGEDFMDEK---LFIAYAKFEAK 255
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 21/23 (91%)
Query: 1 VKNKAPAEIQITAEQLLREAKER 23
VKNKAPA IQI+AEQLLREA +R
Sbjct: 10 VKNKAPAPIQISAEQLLREAVDR 32
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 265 LIRETYER--AIANIPPTKFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFE 322
L+RE +R P +FA+LE L R R +E + + RL+M W Y +E
Sbjct: 25 LLREAVDRQEPALQAPTQRFADLEELHEYQGRKRKEFEDYVRRNRLNMNN--WMRYASWE 82
Query: 323 VGQGERDKVRELHERLLE-RTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQAL 378
+ Q E + R + ER L+ V +W+ Y + EM + + ++ AR + +RA L
Sbjct: 83 LEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRN---INHARNLLDRAVTIL 136
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 213/457 (46%), Gaps = 117/457 (25%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE+ G R+VY AVE GE+ +DEKLFIA+A+FE +E
Sbjct: 215 FEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIYKYALDRLP 274
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEH--------------------- 185
++GDR G+E+VI++KR+ QYEE
Sbjct: 275 RSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDVWFDFARLEEQS 334
Query: 186 ---ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNS 242
ER R +Y+ A+ IP + ++ Y Y +E + + + Y E +
Sbjct: 335 GDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDIDRARQVYTECLKL 394
Query: 243 NPNN----YDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK----------------- 281
P+ W + + N R+T +AI P K
Sbjct: 395 IPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFVR 454
Query: 282 ---------------------FAELESLLGDMERARAIYELAISQPRLDMPELVWKAYID 320
+AELE L D ERARAIYEL I QP LDMPELVWKAYID
Sbjct: 455 CRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQPTLDMPELVWKAYID 514
Query: 321 FEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGD-------------EDSVSLA 367
FE +GE ++ R+L+ERLL++T HVKVW+NYA+FE++ D +++ A
Sbjct: 515 FEDDEGEYERERQLYERLLQKTDHVKVWINYARFEINVPDEEEEEEEEERPISDEAKRRA 574
Query: 368 RRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYND 427
R VFERA++ K KEERV LL AW+ FE HG E K+ ++PRR KKR K +D
Sbjct: 575 RAVFERAHRVFKEKELKEERVELLNAWRAFEHTHGSPEDIDKIEKQMPRRVKKRRKLDDD 634
Query: 428 EGVEEGWEEVFDYIFPEDEAAKPNL-KLLEKAKAWKK 463
+EE DY+FP D+ + NL KLL A WK+
Sbjct: 635 R-----YEEYMDYVFPADDQSAANLSKLLRMAHQWKQ 666
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 181/439 (41%), Gaps = 102/439 (23%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
VKNKAPA +QI+AEQLLREA +R +P+L+ +
Sbjct: 10 VKNKAPAPVQISAEQLLREAVDRQ-------------------------EPSLQAPTQRF 44
Query: 61 AWKKAMEEKQGNKIGE-EGANKENEEEERDKERDREEEDERKD--------EGDRDSDTT 111
A + + E QG K E E + N + R E E+K+ E D D+T
Sbjct: 45 ADLEELHEYQGRKRKEFEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDST 104
Query: 112 ---YGMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRA 168
+R + E +N ++ AR + +RAV + KL+ + EE G+
Sbjct: 105 SVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVD---KLWYKYVYMEET----LGNIP 157
Query: 169 GIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVI 228
G V +R +E E A + AY EK+Y + +
Sbjct: 158 GTRQVF--ERWMSWEPDEGA-------------------WSAYIKLEKRYNEFERARAI- 195
Query: 229 VSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP--------T 280
FQ V+ P N W + R E+ G +DL+RE Y A+ +
Sbjct: 196 -----FQRFTIVHPEPRN---WIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFI 247
Query: 281 KFAELESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVR------- 332
+A E+ L + ERARAIY+ A+ + PR L KAY FE G+R+ V
Sbjct: 248 AYARFETKLKEYERARAIYKYALDRLPRSKSITLH-KAYTTFEKQFGDREGVENVILAKR 306
Query: 333 --ELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEE--RV 388
+ E+L E + VW ++A+ E SGD + V R V+ERA + S EK R
Sbjct: 307 RVQYEEQLKENLRNYDVWFDFARLEEQSGDPERV---RDVYERAIAQIPPSQEKRHWRRY 363
Query: 389 MLL----EAWKEFEAQHGD 403
+ L W+E EA+ D
Sbjct: 364 IYLWIFYALWEEMEAKDID 382
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 227/474 (47%), Gaps = 139/474 (29%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE---------------- 162
FEE+ G + AR +++RA+EF GE+ DE+LFIAFAKFEE +E
Sbjct: 218 FEERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVP 277
Query: 163 ----------------KYGDRAGIEDVIVSKRKFQYEEH--------------------- 185
++GDR GIEDV++ K++FQYEE
Sbjct: 278 KSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEIN 337
Query: 186 ---ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYG----------DRAG--------- 223
E+ R IY+ ++ ++P + +K Y Y +RA
Sbjct: 338 GEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKL 397
Query: 224 -------------------IEDVIVSKRKFQYEEEVNSNPNNYDAWFD-YLRLLEDEGNA 263
I + + K + Y + + NP + FD Y+ L + GN
Sbjct: 398 IPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKS--KIFDQYIHLEIELGNF 455
Query: 264 DLIRETYERAIANIPP-----TKFAELESLLGDMERARAIYELAISQPRLDMPELVWKAY 318
D +R YE+ + +P KFA+LE+ LG+ RARAI+ELAI QP LD PE+VWK +
Sbjct: 456 DRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETVRARAIFELAIQQPNLDRPEVVWKDF 515
Query: 319 IDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMS----------------SGDED 362
ID E+ + D V++L+ +LLE+T HVKVW+ + +F S GD +
Sbjct: 516 IDSEIQLKQFDFVKQLYRKLLEKTNHVKVWIGFIKFVHSIKDKQQQKQRQQQQEEDGDSN 575
Query: 363 SVSL--------------ARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRA 408
+ R +F A+++L ++S+KEER++LLE+WKEFE G+ E+
Sbjct: 576 TTKKDGGDDDNNDDINKPTREIFIEAHKSL-SNSDKEERLLLLESWKEFEQTFGNQETLN 634
Query: 409 KLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDE-AAKPNLKLLEKAKAW 461
++ K+P+R KR N G EE FDYIFPE+E + + +LKLLE A+ W
Sbjct: 635 QVLKKIPQRVIKRRSDGNG-----GIEEYFDYIFPEEEKSTQTSLKLLEAAQRW 683
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 203 RTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGN 262
+TA IY Y E+ D +++ + +E ++ + W Y + N
Sbjct: 73 KTAAIYIKYAAWEESQKD--------LTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKN 124
Query: 263 ADLIRETYERAIANIPPT-----KFAELESLLGDMERARAIYELAIS-QPRLDMPELVWK 316
+L R ++RA+ +P K+ +E +LG+ ARAI+E + +P P+ W
Sbjct: 125 INLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPE---PQ-AWN 180
Query: 317 AYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQ 376
+Y+ FE + R + E+ + ++K W+ Y +FE G+ ++ AR +F+RA +
Sbjct: 181 SYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIEN---ARTIFQRAIE 237
Query: 377 ALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSK-----LPR-RAKKRVKTYND 427
L E+ L A+ +FE ++ + E RA++ K +P+ RAK T+ +
Sbjct: 238 FLGEDGNDEQ---LFIAFAKFEEKYKEIE-RARVIYKYAIDHVPKSRAKDLFDTFTN 290
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 189/471 (40%), Gaps = 90/471 (19%)
Query: 1 VKNKAPAEIQITAEQLLREAKE--RDLEIVPP--VEEGWEEVFDYIFPEDEAAKPNL--- 53
VKNK+ A +QITAEQ+LR A E + L PP V EE+ DY + + + L
Sbjct: 12 VKNKSAAPVQITAEQILRVAHENQQTLPKAPPKQVITDQEELEDYRLRKRQQYESLLGRN 71
Query: 54 ----KLLEKAKAWKKAMEEKQGNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSD 109
+ K AW EE ++D R R + D R
Sbjct: 72 RKTAAIYIKYAAW---------------------EESQKDLTRARSVFERFLDIDHRIPT 110
Query: 110 TTYGMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAG 169
E+ E +N ++ AR +++RAV + +L+ + E+ RA
Sbjct: 111 VWIKYAEM--EMKNKNINLARNIWDRAVCLLPRVS---QLWFKYTFMEDMLGNYPAARAI 165
Query: 170 IEDVIV---------SKRKFQ--YEEHERARVIY-KYALDHIPKDRTAEIYKAYTIHEKK 217
E + S KF+ + E R+I+ KY L H P +T + YT E++
Sbjct: 166 FERWMQWKPEPQAWNSYLKFEQRLKLFENTRLIFEKYILVH-PYIKT---WIKYTKFEER 221
Query: 218 YGDRAGIEDV-IVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIAN 276
G+ IE+ + +R ++ + + N+ + + + E + R Y+ AI +
Sbjct: 222 LGN---IENARTIFQRAIEF---LGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDH 275
Query: 277 IPPTKFAELESLLGDMERAR----AIYELAISQPRLDMPEL---------VWKAYIDFEV 323
+P ++ +L + E+ I ++ + + R E +W Y+ E
Sbjct: 276 VPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEE 335
Query: 324 GQGERDKVRELHERLLERTV----------HVKVWMNYAQF-EMSSGDEDSVSLARRVFE 372
GE +K RE++ER + ++ +W+NYA F E+ S D + AR V+
Sbjct: 336 INGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMER---ARSVYS 392
Query: 373 RANQALKASSEKEERVMLLEAWKEFEA-QHGDDESRAKLNSKLPRRAKKRV 422
+ + ++ +L A FE Q D++R + R K ++
Sbjct: 393 ECIKLIPHKEFSFSKIWILYA--NFEIRQLNLDKARLIYGQAIGRNPKSKI 441
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 12 TAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDE-AAKPNLKLLEKAKAW 62
T Q+L++ +R ++ G EE FDYIFPE+E + + +LKLLE A+ W
Sbjct: 632 TLNQVLKKIPQRVIKRRSDGNGGIEEYFDYIFPEEEKSTQTSLKLLEAAQRW 683
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 211/466 (45%), Gaps = 126/466 (27%)
Query: 119 FEEQNGFVSGARKVYERAV----EFFGEENLDEKLFIAFAKFEEGQRE------------ 162
FEE+ G R+V++ A+ E G++ +DE++FIAFA++E RE
Sbjct: 215 FEEEYGTSDTVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARLREYERARAIYKFGL 274
Query: 163 --------------------KYGDRAGIEDVIVSKRKFQYEEH----------------- 185
++GD+ G+EDVI++KR+ YEE
Sbjct: 275 DNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARL 334
Query: 186 -------ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
+R R +Y+ A+ +P + ++ Y Y E + + + Y+
Sbjct: 335 EESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDT 394
Query: 239 EVNSNPNN----YDAWFDYLRLLEDEGNADLIRETYERAIANIPP--------------- 279
+N P+ W +G R+T RAI P
Sbjct: 395 CLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTARKTLGRAIGMCPKDKIFKEYILLEQKLY 454
Query: 280 -----------------------TKFAELESLLGDMERARAIYELAISQPRLDMPELVWK 316
K+AELE L D+ER RAI+ELA+SQP LDMPE+VWK
Sbjct: 455 EFERCRTLYEKHVMYNPANCQTWIKWAELERGLDDLERTRAIFELAVSQPILDMPEVVWK 514
Query: 317 AYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDED-------------- 362
AYIDFE +GE ++ R L+ERLLE+ H KVW++YAQFE++ DE
Sbjct: 515 AYIDFEEEEGEYERTRALYERLLEKADHPKVWISYAQFEINIPDEAEEEEETEEEVEEKP 574
Query: 363 ----SVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRA 418
+ + AR++FERA++++K K ERV LL AW FE HG E K+ ++PR+
Sbjct: 575 VSEEAKARARKIFERAHKSMKERELKAERVSLLNAWLAFEKTHGSAEDIEKIQKQMPRKT 634
Query: 419 KKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL-KLLEKAKAWKK 463
KK+ K +D WEE DYIFP D+ NL LL A AWK+
Sbjct: 635 KKKRKLEDD-----TWEEYVDYIFPADDQQTKNLSSLLAMANAWKQ 675
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 169/423 (39%), Gaps = 110/423 (26%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
VKNKAPA +QI+AEQLLREA +R +EV NL+ +
Sbjct: 10 VKNKAPAPVQISAEQLLREAVDR------------QEV-------------NLQTPTQRF 44
Query: 61 AWKKAMEEKQGNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRELVFE 120
A + ++E QG K R E+ R++ + Y EL
Sbjct: 45 ADLEELKEYQGRK------------------RKEFEDYVRRNRVRLSNWLQYAQWEL--- 83
Query: 121 EQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQRE-----KYGDRAGIEDVIV 175
EQ F + AR V+ERA++ + +L+I + + E R DRA V
Sbjct: 84 EQKEF-ARARSVFERALDVHPN---NTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRV 139
Query: 176 SKRKFQYEEHERARVIYKYALDHIPKDRTA-----------EIYKAYTIHEKKYG--DRA 222
+ +QY + L IP R + + AY EK+YG DRA
Sbjct: 140 TSLWYQY-------LYVMEMLGDIPGTRQVFDRWMKWQPDEQAWSAYIRLEKRYGEFDRA 192
Query: 223 GIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-- 280
+ F+ V+ P W + + E+ G +D +RE ++ AI I T
Sbjct: 193 --------REIFRAFTAVHPEPRT---WLKWAKFEEEYGTSDTVREVFQTAIQTIAETLG 241
Query: 281 ----------KFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDK 330
FA E+ L + ERARAIY+ + + Y FE G+++
Sbjct: 242 DDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEG 301
Query: 331 V--------RELH-ERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKAS 381
V R L+ E++ E + VW ++A+ E S GD D R V+ERA + +
Sbjct: 302 VEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRT---REVYERAIAQVPPT 358
Query: 382 SEK 384
EK
Sbjct: 359 QEK 361
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 21 KERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNL-KLLEKAKAWKK 64
K+R LE ++ WEE DYIFP D+ NL LL A AWK+
Sbjct: 636 KKRKLE-----DDTWEEYVDYIFPADDQQTKNLSSLLAMANAWKQ 675
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 158/291 (54%), Gaps = 60/291 (20%)
Query: 188 ARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNY 247
AR +A+ PKD+ ++K Y E++ + V RK +E+++ +P+N
Sbjct: 422 ARKTLGHAIGACPKDK---LFKGYIDLERQLFE-------FVRCRKL-FEKQIEWSPSNC 470
Query: 248 DAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARAIYELAISQPR 307
AW KFAELE L D++RARAIYEL ISQP
Sbjct: 471 QAW-----------------------------IKFAELERGLDDIDRARAIYELGISQPV 501
Query: 308 LDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMS---------- 357
LDMPEL+WK+YIDFE +GE D+ R L+ERLLE+T HVKVW+N+A+FE++
Sbjct: 502 LDMPELLWKSYIDFEEYEGEYDRTRALYERLLEKTNHVKVWINFARFEINIPEGEEEDED 561
Query: 358 ----SGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSK 413
E++ AR VFERA++ K KEERV LL AWK FE HG + AK+ +
Sbjct: 562 EEEKPVSEEAKRRARMVFERAHKVFKEKEMKEERVALLNAWKSFEQTHGSPDDIAKIERQ 621
Query: 414 LPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL-KLLEKAKAWKK 463
+P + KKR K +D +EE DY+FP D+ + L ++L+ A WKK
Sbjct: 622 MPSKVKKRRKLDDDR-----YEEYLDYMFPADDESSAKLSQILQMAHKWKK 667
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 159/305 (52%), Gaps = 76/305 (24%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKR 178
FEE+ G R+VY A+E GE+ +DEKLFIA+A++E
Sbjct: 215 FEEEYGTSDMVREVYGLAIETLGEDFMDEKLFIAYARYEA-------------------- 254
Query: 179 KFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
+ +E ERAR IYKYALD +P+ ++ ++KAYT EK++GDR G+EDVI+SKR+ QYEE
Sbjct: 255 --KLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEE 312
Query: 239 EVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK--------------FAE 284
++ NP NYD WFD++RL E G+ + +R+ YERAIA +PP++ +A
Sbjct: 313 QIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYAL 372
Query: 285 LESL-LGDMERARAIYE---------------LAISQPRLDMPEL--------------- 313
E L DMERA IY+ + + + + ++ ++
Sbjct: 373 WEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGA 432
Query: 314 -----VWKAYIDFEVGQGERDKVRELHERLLERT-VHVKVWMNYAQFEMSSGDEDSVSLA 367
++K YID E E + R+L E+ +E + + + W+ +A+ E D D A
Sbjct: 433 CPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQAWIKFAELERGLDDIDR---A 489
Query: 368 RRVFE 372
R ++E
Sbjct: 490 RAIYE 494
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 179/436 (41%), Gaps = 102/436 (23%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
VKNKAPA QI+AEQLLREA +R P +A LE+
Sbjct: 10 VKNKAPAPQQISAEQLLREAVDRQE------------------PALQAPTQRFADLEE-- 49
Query: 61 AWKKAMEEKQGNKIGE-EGANKENEEEERDKERDREEEDERKD--------EGDRDSDTT 111
+ E QG K E E + N + R + E E+K+ E D D T
Sbjct: 50 -----LHEYQGRKRKEFEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPT 104
Query: 112 ---YGMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRA 168
+R + E + ++ AR + +RAV + + KL+ + E E G+
Sbjct: 105 AVVLWIRYIEAEMKTRNINHARNLLDRAVTIYSRVD---KLWYKYVYME----EMLGNIP 157
Query: 169 GIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVI 228
G V +R +E E A + AY EK+Y + + +
Sbjct: 158 GTRQVF--ERWMSWEPDEGA-------------------WGAYIKLEKRYNEFDRVRAI- 195
Query: 229 VSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP--------T 280
F+ V+ P N W + R E+ G +D++RE Y AI +
Sbjct: 196 -----FERFTVVHPEPKN---WIKWARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLFI 247
Query: 281 KFAELESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVREL----- 334
+A E+ L + ERARAIY+ A+ + PR L KAY FE G+R+ V ++
Sbjct: 248 AYARYEAKLKEFERARAIYKYALDRLPRAKSVALH-KAYTTFEKQFGDREGVEDVILSKR 306
Query: 335 ----HERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEE--RV 388
E++ E + +W ++ + E SSGD + V R V+ERA + S EK R
Sbjct: 307 RVQYEEQIKENPKNYDIWFDFVRLEESSGDVERV---RDVYERAIAQMPPSQEKRHWRRY 363
Query: 389 MLL----EAWKEFEAQ 400
+ L W+E EA+
Sbjct: 364 IYLWIFYALWEELEAK 379
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-----KFAELESLLG 290
+E ++ +P W Y+ N + R +RA+ K+ +E +LG
Sbjct: 95 FERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIYSRVDKLWYKYVYMEEMLG 154
Query: 291 DMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMN 350
++ R ++E +S + E W AYI E E D+VR + ER K W+
Sbjct: 155 NIPGTRQVFERWMS---WEPDEGAWGAYIKLEKRYNEFDRVRAIFERFTVVHPEPKNWIK 211
Query: 351 YAQFEMSSGDEDSV----------------------SLAR-----RVFERANQALKASSE 383
+A+FE G D V + AR + FERA K + +
Sbjct: 212 WARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYALD 271
Query: 384 KEER---VMLLEAWKEFEAQHGDDES 406
+ R V L +A+ FE Q GD E
Sbjct: 272 RLPRAKSVALHKAYTTFEKQFGDREG 297
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 37/285 (12%)
Query: 184 EHERARVIYKYALDHIPKD--RTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVN 241
+++RAR +YK A+ +P A+++ AY E + D + V+ + +
Sbjct: 397 DYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIG------MC 450
Query: 242 SNPNNYDAWFDY-LRLLEDEGNADLIRETYERAIANIPP-----TKFAELESLLGDMERA 295
P + + + +RL E D +R YE+ + P ++ ++ES + D ER
Sbjct: 451 PKPKLFTGYIELEMRLRE----FDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERV 506
Query: 296 RAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFE 355
RAI+ELA+ Q LDMPE+VWKAYIDFE G+GER++ R L+ERLLERT HVKVW++YA E
Sbjct: 507 RAIFELAVQQS-LDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKVWISYALME 565
Query: 356 MSS-------------GDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHG 402
+++ G+ LAR+VFER + L+A EKE+R +LLE+WK FE +HG
Sbjct: 566 IATLGGGEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHG 625
Query: 403 DDESRAKLNSKLPRRAKKRVKTYNDEG-VEEGWEEVFDYIFPEDE 446
D+E+ AK+ LP K+ K + G +EE W D +FP+DE
Sbjct: 626 DEETLAKVEDMLPTTRKRWRKAEDGSGELEEYW----DLVFPDDE 666
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 176/380 (46%), Gaps = 98/380 (25%)
Query: 119 FEEQNGFVSGARKVYERAVEFFG--EENLD--EKLFIAFAKFEEGQREKYGDRAGIEDVI 174
FEE G AR+V++ A+EFFG EE ++ + +F AFA+ E
Sbjct: 218 FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMET---------------- 261
Query: 175 VSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
+ +E ERARVIYK+AL +P+ ++A +Y YT EK++GDRAG+E ++ KR+
Sbjct: 262 ------RLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRI 315
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNAD----------LIRETYERAIANIPPT---- 280
QYEEE+ +P NYDAWF RL ED AD +RE YERA+AN+PP
Sbjct: 316 QYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKR 375
Query: 281 ----------KFAELESL-LGDMERARAIYELAISQP--------------------RLD 309
++A E + D +RAR +Y+ A+ RLD
Sbjct: 376 YWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLD 435
Query: 310 M----------------PELVWKAYIDFEVGQGERDKVRELHERLLERTVHV-KVWMNYA 352
+ P+L YI+ E+ E D+VR L+E+ L + W+ +
Sbjct: 436 VSAARKVLGAGIGMCPKPKLF-TGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 353 QFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNS 412
Q E + D + V R +FE A Q E ++ +A+ +FEA G+ E L
Sbjct: 495 QVESAVEDFERV---RAIFELAVQQSLDMPE-----IVWKAYIDFEAGEGERERARNLYE 546
Query: 413 KLPRRAKKRVKTYNDEGVEE 432
+L R VK + + E
Sbjct: 547 RLLERTSH-VKVWISYALME 565
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 170/434 (39%), Gaps = 92/434 (21%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
V+N+APA +QITAEQLLREA+ER P ++ + V D L+ L + +
Sbjct: 13 VRNRAPAAVQITAEQLLREAQERQ---EPAIQAPKQRVQD------------LEELSEFQ 57
Query: 61 AWKKAMEEKQ----GNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRE 116
A K+ E + + I + E + + ER R + D R D +
Sbjct: 58 ARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTD 117
Query: 117 LVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVS 176
+ + +N ++ AR +++RA+ + L+ + EE G R E
Sbjct: 118 MELKARN--INHARNLFDRAITLLPRVD---ALWYKYVYLEELLLNVSGARQIFE----- 167
Query: 177 KRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYG--DRAGIEDVIVSKRKF 234
R Q+E +++A +++Y E++Y DRA
Sbjct: 168 -RWMQWEPNDKA-------------------WQSYIKLEERYNELDRASA---------- 197
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAI------------ANIPPTKF 282
YE + P + W + + ED G D RE ++ A+ A F
Sbjct: 198 IYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAF 256
Query: 283 AELESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVR--------- 332
A +E+ L + ERAR IY+ A+++ PR L + Y FE G+R V
Sbjct: 257 ARMETRLKEFERARVIYKFALARLPRSKSASL-YAQYTKFEKQHGDRAGVELTVLGKRRI 315
Query: 333 ELHERLLERTVHVKVWMNYAQFEMSS-------GDEDSVSLARRVFERANQALKASSEKE 385
+ E L + W + A+ E + G++ R V+ERA + + EK
Sbjct: 316 QYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKR 375
Query: 386 ERVMLLEAWKEFEA 399
+ W ++ A
Sbjct: 376 YWRRYIYLWLQYAA 389
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 37/285 (12%)
Query: 184 EHERARVIYKYALDHIPKD--RTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVN 241
+++RAR +YK A+ +P A+++ AY E + D + V+ + +
Sbjct: 397 DYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIG------MC 450
Query: 242 SNPNNYDAWFDY-LRLLEDEGNADLIRETYERAIANIPP-----TKFAELESLLGDMERA 295
P + + + +RL E D +R YE+ + P ++ ++ES + D ER
Sbjct: 451 PKPKLFTGYIELEMRLRE----FDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERV 506
Query: 296 RAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFE 355
RAI+ELA+ Q LDMPE+VWKAYIDFE G+GER++ R L+ERLLERT HVKVW++YA E
Sbjct: 507 RAIFELAVQQS-LDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKVWISYALME 565
Query: 356 MSS-------------GDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHG 402
+++ G+ LAR+VFER + L+A EKE+R +LLE+WK FE +HG
Sbjct: 566 IATLGGGEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHG 625
Query: 403 DDESRAKLNSKLPRRAKKRVKTYNDEG-VEEGWEEVFDYIFPEDE 446
D+E+ AK+ LP K+ K + G +EE W D +FP+DE
Sbjct: 626 DEETLAKVEDMLPTTRKRWRKAEDGSGELEEYW----DLVFPDDE 666
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 176/380 (46%), Gaps = 98/380 (25%)
Query: 119 FEEQNGFVSGARKVYERAVEFFG--EENLD--EKLFIAFAKFEEGQREKYGDRAGIEDVI 174
FEE G AR+V++ A+EFFG EE ++ + +F AFA+ E
Sbjct: 218 FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMET---------------- 261
Query: 175 VSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
+ +E ERARVIYK+AL +P+ ++A +Y YT EK++GDRAG+E ++ KR+
Sbjct: 262 ------RLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRI 315
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNAD----------LIRETYERAIANIPPT---- 280
QYEEE+ +P NYDAWF RL ED AD +RE YERA+AN+PP
Sbjct: 316 QYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKR 375
Query: 281 ----------KFAELESL-LGDMERARAIYELAISQP--------------------RLD 309
++A E + D +RAR +Y+ A+ RLD
Sbjct: 376 YWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLD 435
Query: 310 M----------------PELVWKAYIDFEVGQGERDKVRELHERLLERTVHV-KVWMNYA 352
+ P+L YI+ E+ E D+VR L+E+ L + W+ +
Sbjct: 436 VSAARKVLGAGIGMCPKPKLF-TGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 353 QFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNS 412
Q E + D + V R +FE A Q E ++ +A+ +FEA G+ E L
Sbjct: 495 QVESAVEDFERV---RAIFELAVQQSLDMPE-----IVWKAYIDFEAGEGERERARNLYE 546
Query: 413 KLPRRAKKRVKTYNDEGVEE 432
+L R VK + + E
Sbjct: 547 RLLERTSH-VKVWISYALME 565
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 170/434 (39%), Gaps = 92/434 (21%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
V+N+APA +QITAEQLLREA+ER P ++ + V D L+ L + +
Sbjct: 13 VRNRAPAAVQITAEQLLREAQERQ---EPAIQAPKQRVQD------------LEELSEFQ 57
Query: 61 AWKKAMEEKQ----GNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRE 116
A K+ E + + I + E + + ER R + D R D +
Sbjct: 58 ARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTD 117
Query: 117 LVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVS 176
+ + +N ++ AR +++RA+ + L+ + EE G R E
Sbjct: 118 MELKARN--INHARNLFDRAITLLPRVD---ALWYKYVYLEELLLNVSGARQIFE----- 167
Query: 177 KRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYG--DRAGIEDVIVSKRKF 234
R Q+E +++A +++Y E++Y DRA
Sbjct: 168 -RWMQWEPNDKA-------------------WQSYIKLEERYNELDRASA---------- 197
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAI------------ANIPPTKF 282
YE + P + W + + ED G D RE ++ A+ A F
Sbjct: 198 IYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAF 256
Query: 283 AELESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVR--------- 332
A +E+ L + ERAR IY+ A+++ PR L + Y FE G+R V
Sbjct: 257 ARMETRLKEFERARVIYKFALARLPRSKSASL-YAQYTKFEKQHGDRAGVELTVLGKRRI 315
Query: 333 ELHERLLERTVHVKVWMNYAQFEMSS-------GDEDSVSLARRVFERANQALKASSEKE 385
+ E L + W + A+ E + G++ R V+ERA + + EK
Sbjct: 316 QYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKR 375
Query: 386 ERVMLLEAWKEFEA 399
+ W ++ A
Sbjct: 376 YWRRYIYLWLQYAA 389
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 162/285 (56%), Gaps = 37/285 (12%)
Query: 184 EHERARVIYKYALDHIPKDRT--AEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVN 241
+++RAR +YK A+ +P A+++ AY E + D + V+ + +
Sbjct: 397 DYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIG------MC 450
Query: 242 SNPNNYDAWFDY-LRLLEDEGNADLIRETYERAIANIPP-----TKFAELESLLGDMERA 295
P + + + +RL E D +R YE+ + P ++ ++ES + D ER
Sbjct: 451 PKPKLFTGYIELEMRLRE----FDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERV 506
Query: 296 RAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFE 355
RAI+ELA+ Q LDMPE+VWKAYIDFE G+GER++ R L+ERLLERT HVKVW++YA E
Sbjct: 507 RAIFELAVQQS-LDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKVWISYALME 565
Query: 356 MSS-------------GDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHG 402
+++ G+ LAR+VFER + L+A EKE+R +LLE+WK FE +HG
Sbjct: 566 IATLGGGEDEDGNEIEGEAGDADLARKVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHG 625
Query: 403 DDESRAKLNSKLPRRAKKRVKTYNDEG-VEEGWEEVFDYIFPEDE 446
D+E AK+ LP K+ K + G +EE W D +FP+DE
Sbjct: 626 DEEMLAKVEDMLPTTRKRWRKAEDGSGELEEYW----DLVFPDDE 666
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 171/366 (46%), Gaps = 97/366 (26%)
Query: 119 FEEQNGFVSGARKVYERAVEFFG--EENLD--EKLFIAFAKFEEGQREKYGDRAGIEDVI 174
FEE G AR+V++ A+EFFG EE ++ + +F AFA+ E
Sbjct: 218 FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMET---------------- 261
Query: 175 VSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKF 234
+ +E ERARVIYK+AL +P+ ++A +Y YT EK++GDRAG+E ++ KR+
Sbjct: 262 ------RLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRI 315
Query: 235 QYEEEVNSNPNNYDAWFDYLRLLEDEGNAD----------LIRETYERAIANIPPT---- 280
QYEEE+ +P NYDAWF RL ED AD +RE YERA+AN+PP
Sbjct: 316 QYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKR 375
Query: 281 ----------KFAELESL-LGDMERARAIYELAISQP--------------------RLD 309
++A E + D +RAR +Y+ A+ RLD
Sbjct: 376 YWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLD 435
Query: 310 M----------------PELVWKAYIDFEVGQGERDKVRELHERLLERTVHV-KVWMNYA 352
+ P+L YI+ E+ E D+VR L+E+ L + W+ +
Sbjct: 436 VSAARKVLGAGIGMCPKPKLF-TGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWT 494
Query: 353 QFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNS 412
Q E + D + V R +FE A Q E ++ +A+ +FEA G+ E L
Sbjct: 495 QVESAVEDFERV---RAIFELAVQQSLDMPE-----IVWKAYIDFEAGEGERERARNLYE 546
Query: 413 KLPRRA 418
+L R
Sbjct: 547 RLLERT 552
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 173/435 (39%), Gaps = 94/435 (21%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
V+N+APA +QITAEQLLREA+ER P ++ + V D L+ L + +
Sbjct: 13 VRNRAPAAVQITAEQLLREAQERQ---EPTIQAPKQRVQD------------LEELSEFQ 57
Query: 61 AWKKAMEEKQ----GNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRE 116
A K+ E + + I + E + + ER R + D R D +
Sbjct: 58 ARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTD 117
Query: 117 LVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVS 176
+ + +N ++ AR +++RA+ + L+ + EE G R E
Sbjct: 118 MELKARN--INHARNLFDRAITLLPRVD---ALWYKYVYLEELLLNVSGARQIFE----- 167
Query: 177 KRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYG--DRA-GIEDVIVSKRK 233
R Q+E +++A +++Y E++Y DRA I + ++ R
Sbjct: 168 -RWMQWEPNDKA-------------------WQSYIKLEERYNELDRASAIYERWIACRP 207
Query: 234 FQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAI------------ANIPPTK 281
P N+ AW + ED G D RE ++ A+ A
Sbjct: 208 I---------PKNWVAW---AKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAA 255
Query: 282 FAELESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVR-------- 332
FA +E+ L + ERAR IY+ A+++ PR L + Y FE G+R V
Sbjct: 256 FARMETRLKEFERARVIYKFALARLPRSKSASL-YAQYTKFEKQHGDRAGVELTVLGKRR 314
Query: 333 -ELHERLLERTVHVKVWMNYAQFEMSS-------GDEDSVSLARRVFERANQALKASSEK 384
+ E L + W + A+ E + G++ R V+ERA + + EK
Sbjct: 315 IQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEK 374
Query: 385 EERVMLLEAWKEFEA 399
+ W ++ A
Sbjct: 375 RYWRRYIYLWLQYAA 389
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 206/424 (48%), Gaps = 63/424 (14%)
Query: 63 KKAMEEKQGNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRELVFEEQ 122
K + K+ ++ ++E E+ +R R ED + E ++ D + L EE
Sbjct: 280 KAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVR-ENPKNYDVWFDYARL--EEA 336
Query: 123 NGFVSGARKVYERAVEFFGEENLDEK------LFIAFAKFEEGQREKYGDRAGIEDVIVS 176
+G + R+VYE+A+ L+I FA +EE + +
Sbjct: 337 SGDIDRTREVYEKAIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKN------------- 383
Query: 177 KRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQY 236
ERAR +Y L IP RT K + +H+ + R G D+ +++
Sbjct: 384 --------PERARQVYDTCLKLIP-HRTFTFAKVW-MHKAHFEIRQG--DLAAARKTLGR 431
Query: 237 EEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP-----TKFAELESLLGD 291
+ + + + + L + G ++ YE+ IA P K+AELE L D
Sbjct: 432 AIGMCPKDRLFKGYIEMEQKLYEFGRCRIL---YEKHIAYNPANCSTWVKWAELERGLDD 488
Query: 292 MERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNY 351
++RARAI ++ I+QP LDMPE+VWK+YIDFE +GE DK R L+ERLL++ H KVW++Y
Sbjct: 489 LDRARAILDMGIAQPVLDMPEVVWKSYIDFEEEEGEYDKTRSLYERLLDKADHPKVWISY 548
Query: 352 AQFEMS----------SGDEDSVS-----LARRVFERANQALKASSEKEERVMLLEAWKE 396
AQFE++ E VS ARRVFERA+Q K K ERV +L AW
Sbjct: 549 AQFEINIPEEAGEGADEEQEQPVSDEAKARARRVFERAHQGFKDKEMKAERVSILNAWLV 608
Query: 397 FEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL-KLL 455
FE HG E K+ ++PRR KK+ K +D WEE DYIFP DE NL ++
Sbjct: 609 FEKTHGSAEDIEKIEKQMPRRTKKKRKLDDD-----TWEEYVDYIFPADEQVGKNLMNMM 663
Query: 456 EKAK 459
KA+
Sbjct: 664 AKAR 667
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 56/265 (21%)
Query: 119 FEEQNGFVSGARKVYERAVE---FFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIV 175
FEE+ G R+V+ERA+E +G+E ++E+LFIA+A++E A + D+
Sbjct: 215 FEEEYGTSDRVREVFERAIEELSKYGDEFVEERLFIAYARYE----------AKLHDL-- 262
Query: 176 SKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQ 235
+RAR IYK+ L+++P+ + ++K YT EK+YGDR G+EDV++SKR+
Sbjct: 263 ----------DRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRH 312
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERA 295
YE+ V NP NYD WFDY RL E G+ D RE YE+AIA +PPT+
Sbjct: 313 YEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQ--------AKRHWR 364
Query: 296 RAIYELAISQPRLDMPELVWKAYIDFEVGQGER-DKVRELHERLLERTVH-----VKVWM 349
R IY +W + +E + + ++ R++++ L+ H KVWM
Sbjct: 365 RYIY--------------LWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWM 410
Query: 350 NYAQFEMSSGDEDSVSLARRVFERA 374
+ A FE+ GD ++ AR+ RA
Sbjct: 411 HKAHFEIRQGD---LAAARKTLGRA 432
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 214/418 (51%), Gaps = 72/418 (17%)
Query: 78 GANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRELVFEEQNGF-VSGARKVYERA 136
GA + E K R + E+ ++D D D+ +Y + +++G R+++ERA
Sbjct: 293 GAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSY----ITLGQESGLEADQIREIFERA 348
Query: 137 VEFFGEEN--LDEK---LFIAFAKFEEGQREKYGDRAGIEDVIVSKRKFQYEEHERARVI 191
V + L + L+I +A +EE + +E E+AR I
Sbjct: 349 VSNVPPHSKRLWRRYIFLWIKYAIWEE---------------------LENKEVEKAREI 387
Query: 192 YKYALDHIP--KDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDA 249
YK + IP K A+++ + E ++G+ ++ P Y
Sbjct: 388 YKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGLGMS-----GGKPALYKG 442
Query: 250 WFDYLRLLEDEGNADLIRETYERAIANI-----PPTKFAELESLLGDMERARAIYELAIS 304
Y+ L D R+ Y++ + P ++AELE +LGD ERARAI+ELA+S
Sbjct: 443 ---YIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERARAIFELAVS 499
Query: 305 QPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTV-HVKVWMNYAQFEMSSGDED- 362
QP ++MPELVWK +I+FE + D+ R ++ +LL+RT H+KVW+++AQFE++ ED
Sbjct: 500 QPEMEMPELVWKRFIEFEAEEENYDRARAIYRQLLDRTHGHIKVWISFAQFEVTVPAEDQ 559
Query: 363 -----------------SVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDE 405
+ + AR +F A ALKA++++EERV+L E+W+EFE +HGDD+
Sbjct: 560 ELQYNDEGEAEIEVTEEAKARARSIFGEAWDALKAANKREERVVLFESWREFEEEHGDDK 619
Query: 406 SRAKLNSKLPRRAKKRVKTYNDEGVEEG-WEEVFDYIFPEDEAAKPNLKLLEKAKAWK 462
S+A L+ + P KK+ K +E+G +EE DY+FP DE K KLLE A+ WK
Sbjct: 620 SKADLDKRKPTPVKKKRK------LEDGTFEEYIDYVFPTDEEDKSFSKLLENARKWK 671
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 169/365 (46%), Gaps = 87/365 (23%)
Query: 119 FEEQNGFVSGARKVYERAVEFF------GEENLDEKLFIAFAKFEEGQREKYGDRAGIED 172
FE + G R+VY ++ G + LDE L +A FE RE
Sbjct: 209 FEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHRE---------- 258
Query: 173 VIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKR 232
+ERAR +Y Y L+ +PK ++A++Y YT EK+YG + GIE+V+++KR
Sbjct: 259 ------------YERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKR 306
Query: 233 KFQYEEEVNSNPNNYDAWFDYLRLLEDEG-NADLIRETYERAIANIPP------------ 279
+ +YE+++ +P +YD WF Y+ L ++ G AD IRE +ERA++N+PP
Sbjct: 307 RSKYEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFL 366
Query: 280 -TKFAELESLLG-DMERARAIYELAISQP--------------------RLDMPE----- 312
K+A E L ++E+AR IY+ IS ++PE
Sbjct: 367 WIKYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKIL 426
Query: 313 -----------LVWKAYIDFEVGQGERDKVRELHERLLERTVHVKV-WMNYAQFEMSSGD 360
++K YI E E D+ R+L+++ +E+ WM YA+ E GD
Sbjct: 427 GRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGD 486
Query: 361 EDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKK 420
E+ AR +FE A + E E ++ + + EFEA+ + + + +L R
Sbjct: 487 EER---ARAIFELA----VSQPEMEMPELVWKRFIEFEAEEENYDRARAIYRQLLDRTHG 539
Query: 421 RVKTY 425
+K +
Sbjct: 540 HIKVW 544
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-----KFAELESLLG 290
+E + N + W Y++ E N + R +RA+ +P + E LG
Sbjct: 89 FERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDKLWFTYVATEETLG 148
Query: 291 DMERARAIYELAIS-QPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVH--VKV 347
++ RA++E + +P P W AY++ E E D+ R + R + TVH
Sbjct: 149 NIAGCRAVFERWMHWRP----PVTAWAAYVNMEKRYREFDRARGILRRYV--TVHPGAPA 202
Query: 348 WMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVM---LLEAWKEFEAQHGDD 404
W +A+FEM +G+ D+V R V+ L + + LL W FE +H +
Sbjct: 203 WNKWAKFEMEAGNRDTV---REVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREY 259
Query: 405 ESRAKLNS----KLPRRAKKRVKTYND 427
E L + KLP+ K K Y D
Sbjct: 260 ERARALYTYGLEKLPK--SKSAKLYAD 284
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 190/484 (39%), Gaps = 128/484 (26%)
Query: 1 VKNKAPAEIQITAEQLLREAKERDLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKAK 60
VKNKAPA +QI+AEQ+L EA ER P+++ E++ D +E A+ + K +
Sbjct: 5 VKNKAPAALQISAEQILLEAYERK---ETPLQQT-EQIADL----EELAEYQGR---KRQ 53
Query: 61 AWKKAMEEKQGNKIGEEGANKENEEEERDKERDREEEDERKDEGDRDSDTTYGMRELVFE 120
++ A+ + N G+ + E E+R+ R R ER E + T+ +R + E
Sbjct: 54 EYEGALRRNRLN-TGQWMRYAQWELEQREFARAR-SVFERALEVNSTHVPTW-IRYIQCE 110
Query: 121 EQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKRKF 180
+ ++ AR + +RAV + KL+ + E E G+ AG V F
Sbjct: 111 LKEKNINHARNLLDRAVTLLPRVD---KLWFTYVATE----ETLGNIAGCRAV------F 157
Query: 181 QYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKY--GDRA-GIEDVIVSKRKFQYE 237
+ H R V TA + AY EK+Y DRA GI R++
Sbjct: 158 ERWMHWRPPV-------------TA--WAAYVNMEKRYREFDRARGI------LRRY--- 193
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAEL----ESLLG--- 290
V +P AW + + + GN D +RE Y I + + ESLL
Sbjct: 194 --VTVHPGA-PAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWA 250
Query: 291 -------DMERARAIYELAISQ-PRLDMPEL----------------------------- 313
+ ERARA+Y + + P+ +L
Sbjct: 251 SFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKY 310
Query: 314 ------------VWKAYIDFEVGQG-ERDKVRELHERLLERTV---------HVKVWMNY 351
W +YI G E D++RE+ ER + ++ +W+ Y
Sbjct: 311 EDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKY 370
Query: 352 AQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGD-DESRAKL 410
A +E E V AR +++ + +V LL W +FE +HG+ E+R L
Sbjct: 371 AIWEELENKE--VEKAREIYKTCISIIPHKKFTFAKVWLL--WAKFEIRHGNLPEARKIL 426
Query: 411 NSKL 414
L
Sbjct: 427 GRGL 430
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 36 EEVFDYIFPEDEAAKPNLKLLEKAKAWK 63
EE DY+FP DE K KLLE A+ WK
Sbjct: 644 EEYIDYVFPTDEEDKSFSKLLENARKWK 671
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 173/309 (55%), Gaps = 42/309 (13%)
Query: 186 ERARVIYKYALDHIP--KDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSN 243
+RAR +Y+ AL IP K A+++ Y + E + + V+++ +
Sbjct: 380 DRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQ------RKIDVARKTLGRALGMCPK 433
Query: 244 PNNYDAWFDYLRLLEDE-GNADLIRETYERAI-----ANIPPTKFAELESLLGDMERARA 297
P + + ++ ED D R YE+ I A P +A LE+ LGD +RARA
Sbjct: 434 PKLFRGYIEF----EDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARA 489
Query: 298 IYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMS 357
+Y LA++QP L+ PELVWKAYIDFE + E K R ++++LL HVKVW+++A FE++
Sbjct: 490 LYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWISFANFEIA 549
Query: 358 SGDED-------------SVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDD 404
++D +V AR VFE A L+ KEERV+LLEAWK+FEA HG +
Sbjct: 550 HLEDDDEEPPNEEVASPTAVVRARNVFENALAHLRQQGLKEERVVLLEAWKQFEAMHGTE 609
Query: 405 ESRAKLNSKLPRRAKKRVKTYNDEGVEEG-WEEVFDYIFPE---DEAAKPNLKLLEKAKA 460
++R ++S +P+ KKR + +E+G +EE DY+FP+ D+ K K+LE ++
Sbjct: 610 DTRKHVSSLMPQVVKKRRR------LEDGSFEEYLDYLFPDTATDQGDKMR-KMLELSRK 662
Query: 461 WKKAMEEKQ 469
WK+ M +K+
Sbjct: 663 WKEEMAKKK 671
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 140/265 (52%), Gaps = 41/265 (15%)
Query: 109 DTTYGMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRA 168
+ T +R FEE+ G + R+VY A++ G+E L+E+ FIAFAKFE Q+E
Sbjct: 203 EVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKE------ 256
Query: 169 GIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVI 228
+ERAR I+KYA+D +P+ ++ E+YK YT EK++GD G+E +
Sbjct: 257 ----------------YERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTV 300
Query: 229 VSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-------- 280
+ KR+ QYE+ + +P +YD W D L+L E G+ + IRETYE+AIA +P
Sbjct: 301 LDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRR 360
Query: 281 ------KFAELESL-LGDMERARAIYELA---ISQPRLDMPELVWKAYIDFEVGQGERDK 330
+ E + + D++RAR +Y+ A I + +L W Y FE+ Q + D
Sbjct: 361 YVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKL-WLMYAMFELRQRKIDV 419
Query: 331 VRELHERLLERTVHVKVWMNYAQFE 355
R+ R L K++ Y +FE
Sbjct: 420 ARKTLGRALGMCPKPKLFRGYIEFE 444
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 175/408 (42%), Gaps = 104/408 (25%)
Query: 1 VKNKAPAEIQITAEQLLREAKER-DLEIVPPVEEGWEEVFDYIFPEDEAAKPNLKLLEKA 59
VKNK PA IQI+AEQLLREA ER D+ VPP K N+ LE+
Sbjct: 8 VKNKNPAPIQISAEQLLREAVERQDVAFVPP-------------------KINITDLEE- 47
Query: 60 KAWKKAMEEKQGNKIGE-EGANKENEEEERDKERDREEEDERKD--------EGDRDSDT 110
++E QG K E E A + N R + E ++K+ E D D+
Sbjct: 48 ------LQEFQGRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDS 101
Query: 111 TY---GMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDR 167
TY ++ + E +N ++ AR +++RAV + +KL+ + E E G+
Sbjct: 102 TYIPLWLKYIECEMKNRNINHARNLFDRAV---TQLPRVDKLWYKYVYME----EMLGNI 154
Query: 168 AGIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKY--GDRA-GI 224
G V +R ++E E + +Y E++Y +RA GI
Sbjct: 155 TGCRQVF--ERWLKWEPDENC-------------------WMSYIRMERRYHENERARGI 193
Query: 225 EDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP----- 279
YE V +P + W + R E+ GNA +R+ Y AI +
Sbjct: 194 -----------YERFVVVHPEVTN-WLRWARFEEECGNAANVRQVYLAAIDALGQEFLNE 241
Query: 280 ---TKFAELESLLGDMERARAIYELAIS-QPRLDMPELVWKAYIDFEVGQGER------- 328
FA+ E + ERAR I++ AI PR EL +K Y FE G+
Sbjct: 242 RFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMEL-YKEYTHFEKQFGDHLGVESTV 300
Query: 329 -DKVRELHERLLERTVH-VKVWMNYAQFEMSSGDEDSVSLARRVFERA 374
DK R +E+LL+ + + W++ + E S+GD +++ R +E+A
Sbjct: 301 LDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTI---RETYEKA 345
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 65/327 (19%)
Query: 184 EHERARVIYKYALDHIPKDRT--AEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVN 241
+++R R IYK A+ +P R A+++ Y E + + ++ + + ++
Sbjct: 402 DYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAPKLKLF 461
Query: 242 SNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP-----TKFAELESLLGDMERAR 296
S+ Y+ L D R+ YE+A+ P +FAELE L D +RAR
Sbjct: 462 SS---------YIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRAR 512
Query: 297 AIYELAISQPR-------LDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWM 349
A++EL + Q LDMPE+VWKAYIDFE + E +KV L+ERLL ++ HVKVW+
Sbjct: 513 ALFELGVGQAEGGEASGGLDMPEIVWKAYIDFEFEEREWEKVDALYERLLAKSGHVKVWI 572
Query: 350 NYAQFEMSSG------------------------------DEDSV---------SLARRV 370
+YA +++ +E+++ S AR +
Sbjct: 573 SYALSKINRATAIEEDEDEEDDDHDHDDDMAATPSRELTEEEEALRQQRRSALASSAREI 632
Query: 371 FERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGV 430
F+RA LK+ S K+ERV LLE+WK FE QHG E+ +++ +K PR KKR + ++
Sbjct: 633 FQRAYDNLKSRSLKDERVALLESWKSFEQQHGSAETLSRVEAKFPRVVKKRRQV--EDSA 690
Query: 431 EEGWEEVFDYIFPEDE-AAKPNLKLLE 456
+ EE +D IFP+D+ K KLL+
Sbjct: 691 DGAMEEYYDLIFPDDQDEGKGAFKLLQ 717
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 218/484 (45%), Gaps = 117/484 (24%)
Query: 1 VKNKAPAEIQITAEQLLREAKER-DLEIVPPVE--EGWEEVFDYI------FPEDEAAK- 50
+KN+APA IQI+AEQLLREA+ER + PV+ E +EE+ +Y F ED +
Sbjct: 8 IKNRAPAPIQISAEQLLREAQERQEAPASAPVQKIEDYEELEEYRGRRRSEF-EDRLRRN 66
Query: 51 -PNLKLLEKAKAWKKAMEEK-QGNKIGEEGAN------------KENEEEERDKERDREE 96
N+ K +W+ + E + I E + E E + R+ + R
Sbjct: 67 GLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNL 126
Query: 97 EDERKDEGDRDSDTTYGMRELVFEEQNGFVSGARKVYERAVEFFGEE-------NLD--- 146
D R Y L EE G + G R+V+ER +++ EE NL+
Sbjct: 127 YDRAVSILPRIDQLWYKYVHL--EELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRY 184
Query: 147 -------------------EKLFIAFAKFEE-------------------GQREKYGDRA 168
K +I +AKFEE G+ E ++A
Sbjct: 185 DELDRASAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKA 244
Query: 169 GIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVI 228
+K + + +E+ERARVIYKYAL+ +P+ ++ IY +YT EK++G +ED +
Sbjct: 245 QSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTV 304
Query: 229 VSKRKFQYEEEVNSN-----PNNYDAWFDYLRLLEDEGNADL---------------IRE 268
+ KR+ QYEEE+ + P +YD WFDY RL ED A L +RE
Sbjct: 305 IGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVRE 364
Query: 269 TYERAIANIPPT--------------KFAELESL-LGDMERARAIYELAIS---QPRLDM 310
YERAIA +P + ++A E + D +R R IY+ AI+ R
Sbjct: 365 VYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTF 424
Query: 311 PELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRV 370
+L W Y FEV + E R++ + +K++ +Y + E+S + D AR++
Sbjct: 425 AKL-WVQYARFEVRRLELTAARKILGAAIGMAPKLKLFSSYIELEVSLKEFDR---ARKI 480
Query: 371 FERA 374
+E+A
Sbjct: 481 YEKA 484
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 36/242 (14%)
Query: 184 EHERARVIYKYALDH------IPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
E+ERAR I++ L I ++ +IY +YT EK YGD+ IE I+ KRK +YE
Sbjct: 266 EYERARAIFQLMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTIESSIMIKRKLKYE 325
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARA 297
EEVN +P++YD+W+ Y+ +L+ E N ++ RET+ERAI IP F + R R
Sbjct: 326 EEVNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFK------STVWR-RY 378
Query: 298 IYELAISQPRLDMPELVWKAYIDF-EVGQGERDKVRELHERLLERTVH-----VKVWMNY 351
IY +W Y + E G + R + + L+ H K+W+++
Sbjct: 379 IY--------------IWVKYAFWEEFTMGSIENGRNIWNKALKVIPHKRFTFAKIWISF 424
Query: 352 AQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLN 411
AQFE+ + E+ ++ AR++ R ++ SS + + L + + E E + G+ + KL
Sbjct: 425 AQFEIRNDPENGLASARKILGR---SIGQSSTVKPKRKLFKFYIELEQKLGEWDRVRKLY 481
Query: 412 SK 413
K
Sbjct: 482 EK 483
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 195/476 (40%), Gaps = 116/476 (24%)
Query: 45 EDEAAKPNLKLLEKAKAWKKAMEEKQGNKIGEEGANKENEEEERD--------KERDREE 96
E E A+ +L+ K+ ++ + +Q N+I E ++D K + + E
Sbjct: 266 EYERARAIFQLMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTIESSIMIKRKLKYE 325
Query: 97 EDERKDEGDRDSDTTYGMRELVFEEQNGFVSGARKVYERAVEFFGEENLDEK-------L 149
E+ K D DS +Y ++ +E N V+ R+ +ERA++ + +
Sbjct: 326 EEVNKSPSDYDSWWSYI--SILQQEDNNEVT--RETFERAIKVIPTDAFKSTVWRRYIYI 381
Query: 150 FIAFAKFEEGQREKYGDRAGIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRT--AEI 207
++ +A +EE F E R I+ AL IP R A+I
Sbjct: 382 WVKYAFWEE---------------------FTMGSIENGRNIWNKALKVIPHKRFTFAKI 420
Query: 208 YKAYTIHE-------------KKYGDRAGIEDVIVSKRK-FQYEEEVNSNPNNYDAWFDY 253
+ ++ E K G G + KRK F++ Y
Sbjct: 421 WISFAQFEIRNDPENGLASARKILGRSIGQSSTVKPKRKLFKF----------------Y 464
Query: 254 LRLLEDEGNADLIRETYERAI--ANIPPTKFAELESLLGDM---------ERARAIYELA 302
+ L + G D +R+ YE+ + + + + + SLL + +R +++EL
Sbjct: 465 IELEQKLGEWDRVRKLYEKWLELSLVGENNLSTINSLLTYIDFEKNIQEHQRCISLFELG 524
Query: 303 ISQ-------PRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFE 355
+ +++ E + +I++ + + R L+ +L+ER KVW+++A FE
Sbjct: 525 VRLAEDDKIFTKVNPLEYMLMQFINYYKEEMRYAEARSLYRKLVERVSTPKVWISFALFE 584
Query: 356 MSSG--------------------DEDSVSLARRVFERANQALKASSEKEERVMLLEAWK 395
S DE R VF AN K ++ KE+R +++EAWK
Sbjct: 585 SSIPTDSQLKAFEESTEEEFEFSIDETHRETTRSVFREANDFFKHNNLKEDRAVVIEAWK 644
Query: 396 EFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPN 451
++E +G +ES + KLP K+R EG E EE DYIFPEDE AKP+
Sbjct: 645 QYEEANGSEESLRDITKKLPVIVKRRRLI---EGEE---EEYLDYIFPEDEEAKPS 694
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 42/193 (21%)
Query: 229 VSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADL--IRETYERA----IANIP-PTK 281
++KRK +YE+++N N N+ W Y + E + N D R +ERA + +IP T
Sbjct: 51 LTKRK-EYEQQLNKNRLNFGQWLRYAKW-EVKHNHDFPRARSIFERALEVNVQHIPFWTH 108
Query: 282 FAELESLLGDMERARAIYELAISQ-PRLD-----------------MPELV--------- 314
+ + E ++ AR + + A++ PR+D M ++
Sbjct: 109 YIQFELSHKNITHARNLLDRAVTTLPRVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNP 168
Query: 315 ----WKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMS--SGDEDSVSLAR 368
W AYI++E E D RE++ R ++ ++W+ + FEM+ D + V R
Sbjct: 169 NPSAWDAYINYEKRYDEYDNAREIYIRYVQIHSSGEIWLKWIDFEMNDVPIDPEQVKRIR 228
Query: 369 RVFERANQALKAS 381
VFE + ++ AS
Sbjct: 229 NVFELSVDSMLAS 241
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 105/367 (28%)
Query: 114 MRELVFEEQNGFVSGARKVYERAVE----FFGEENLD-EKLFIAFAKFEEGQREKYGDRA 168
++ + FE ++G R+VY A + F G + + E+L ++FA++E Q
Sbjct: 198 LKWVAFERKHGDAGTVRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQ-------- 249
Query: 169 GIEDVIVSKRKFQYEEHERARVIYKYALDHIP-----KDRTAEIYKAYTIHEKKYGD-RA 222
+E ER+R + A+ P KD TA++ EKK+G RA
Sbjct: 250 --------------QELERSRAVLSVAVSRWPESSTLKDATAQL-------EKKFGGARA 288
Query: 223 GIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDE---------------------- 260
G + I+ KRK +YEE++ ++P +YDAW+ YL LLE+
Sbjct: 289 G--ESILFKRKREYEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAVPRSQE 346
Query: 261 -----------------------GNADLIRETYERAIAN-IPPTKF---------AELES 287
++DL R Y++ + IP TKF AE E
Sbjct: 347 KDMQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEI 406
Query: 288 LLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKV 347
+++AR I L +S P+L ++ YID E+ E D+VR LHE+LLE V
Sbjct: 407 RQEKLDKARKI--LGMSLGMCPKPKL-FQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVLS 463
Query: 348 -WMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDES 406
W+ YA+ E + GDED AR ++E A S+ + + L++ + +FE + E
Sbjct: 464 NWIEYAELEENLGDEDR---ARGIYEIGLTADGGLSQARQ-LQLMQRYIQFETDASEFER 519
Query: 407 RAKLNSK 413
L S+
Sbjct: 520 ARALYSR 526
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 48/221 (21%)
Query: 282 FAELESLLGDMERARAIYELAI------SQPRLDMPELVWKAYIDFEVGQGERDKVRELH 335
+AELE LGD +RAR IYE+ + SQ R +L+ + YI FE E ++ R L+
Sbjct: 468 YAELEENLGDEDRARGIYEIGLTADGGLSQAR--QLQLM-QRYIQFETDASEFERARALY 524
Query: 336 ERLLERTVH-VKVWMNYAQFEMSSGDEDSVSL---------------------------- 366
R + + + VW++ A +E S V+
Sbjct: 525 SRYVALSGYDPNVWISCALYESSVPTAAQVASYAHDQPNSDGDDSDDAYEQEFELTEENK 584
Query: 367 --ARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLPRRAKKRVKT 424
R +FE+A + + + E R+++L+A+K++E+ HG E+R K+ S+ PR+ ++
Sbjct: 585 EQTRAIFEKALRHYTSEKDDEGRILVLQAYKDYESIHGSAEARQKIASRQPRKVTRKRTV 644
Query: 425 YNDEGVEEGWEEVFDYIFPEDEAAKPNL--KLLEKAKAWKK 463
+G+E +E Y FP+D + ++ K + A+ WK+
Sbjct: 645 ---DGIE---KEYVAYEFPDDTVSTSSVASKFVSLAQRWKQ 679
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT-----KFAELESLLG 290
+E + P + W Y+ + + R RA A +P K+ +E LG
Sbjct: 83 FERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATALLPRVDKLWYKYVLMEESLG 142
Query: 291 DMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMN 350
+E R +Y + L+ W A++DFE QG+ + VRE++ R + W+
Sbjct: 143 QVELVRGVYTKWCT---LEPAAAAWDAFVDFETRQGQVEHVREVYSRYVMVHPVAATWLK 199
Query: 351 YAQFEMSSGDEDSVSLARRVFERANQALK--ASSEKEERVMLLEAWKEFEAQHGDDE-SR 407
+ FE GD +V RRV+ A L A ++ E L+ ++ E+EA + E SR
Sbjct: 200 WVAFERKHGDAGTV---RRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQELERSR 256
Query: 408 AKLNSKLPR 416
A L+ + R
Sbjct: 257 AVLSVAVSR 265
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 89/305 (29%)
Query: 119 FEEQNGFVSGARKVYERAVE----FFGEENLD-EKLFIAFAKFEEGQREKYGDRAGIEDV 173
FE+ +G +S R V+ A++ F G +D E++ +FA +E Q
Sbjct: 206 FEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQ------------- 252
Query: 174 IVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIH-EKKYGDRAGIEDVIVSKR 232
E+ER+R +Y+ A++ P +E K I EKK+G +ED++++KR
Sbjct: 253 ---------GEYERSRTLYRLAVERWP---ISEALKEQQIQFEKKFGSSKNMEDIVIAKR 300
Query: 233 KFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADL--------------------------- 265
K +YE+ + S+P +Y W+ Y+ L+E++ L
Sbjct: 301 KAEYEQYLKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIR 360
Query: 266 ------------------IRETYERAIANIPPTKF---------AELESLLGDMERARAI 298
IR Y+ + IP KF AE E ++ +AR I
Sbjct: 361 ICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKI 420
Query: 299 YELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLE-RTVHVKVWMNYAQFEMS 357
L +S + P+ V+K YI+ E+ E D+VR+L+E+ ++ V+ W++YA+ E +
Sbjct: 421 --LGVSLGKSPKPK-VFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEEN 477
Query: 358 SGDED 362
GDED
Sbjct: 478 LGDED 482
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 83/313 (26%)
Query: 187 RARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNN 246
+AR I +L PK + + Y I K++ DR RK YE+ ++ NP++
Sbjct: 416 KARKILGVSLGKSPKPKVFKYYINLEIRLKEF-DRV---------RKL-YEKYIDFNPSS 464
Query: 247 YDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARAIYELAISQP 306
+W DY AELE LGD +R+R IY++++S
Sbjct: 465 VQSWLDY-----------------------------AELEENLGDEDRSRGIYDISMSN- 494
Query: 307 RLDMPE----LVWKAYIDFEVGQGERDKVRELHERLLERTVH-VKVWMNYAQFEMSSGDE 361
+ + E +V + YI FE E +K REL+E+ L + + V +W+N A FE + E
Sbjct: 495 NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQALFESTIPTE 554
Query: 362 DSVSL-----------------------------ARRVFERANQALKASSEKEERVMLLE 392
+ R +FE+A K +E ++R +L+
Sbjct: 555 TQLIAYQQSHQDGNFDDDGEEEFSFEITPENKHHTRAIFEKAISYFKEHNEDKKRQQVLQ 614
Query: 393 AWKEFEAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL 452
+ E+E HG+ E+ K+N++ P +++V N E +E + FP+D A+P +
Sbjct: 615 SLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIE------QESYKLDFPDDRVAQPPI 668
Query: 453 --KLLEKAKAWKK 463
LL AK W+K
Sbjct: 669 ARNLLALAKQWEK 681
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 39/214 (18%)
Query: 187 RARVIYKYAL--DH--IPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNS 242
RAR IY+ AL DH IP ++ Y E K+ + +++ + N+
Sbjct: 81 RARSIYERALLVDHGFIP------LWIQYIDSEIKWKNINHARNLL--------DRATNA 126
Query: 243 NPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT----KFAELESLLGDMERARAI 298
P WF YL L E GN ++R Y R + P F E E+ + E R I
Sbjct: 127 LPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNI 186
Query: 299 Y-ELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHV---------KVW 348
Y + + P++D W ++ FE G+ VR + L+ +V
Sbjct: 187 YSKFVLVHPQID----TWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVI 242
Query: 349 MNYAQFEMSSGD-EDSVSLARRVFER--ANQALK 379
++A +E S G+ E S +L R ER ++ALK
Sbjct: 243 GSFASWEASQGEYERSRTLYRLAVERWPISEALK 276
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 262 NADLIRETYERAIANIPPT-----KFAELESLLGDMERARAIYELAIS-QPRLDMPELVW 315
N + R +RA +P K+ LE LG+ R IY S +P D W
Sbjct: 112 NINHARNLLDRATNALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPD----AW 167
Query: 316 KAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERAN 375
++I+FE + VR ++ + + + W+ + +FE + GD SV R VF A
Sbjct: 168 DSFIEFETRCLNFENVRNIYSKFVLVHPQIDTWLKWVRFEQTHGDISSV---RTVFSFAL 224
Query: 376 QALKASS 382
L + S
Sbjct: 225 DTLTSFS 231
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 272 RAIANIPPTKFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKV 331
+ IA +LE L R R YE + + RLD+ + W Y FE Q + +
Sbjct: 25 KQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQ--WMRYAQFEFDQKDIRRA 82
Query: 332 RELHER-LLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVML 390
R ++ER LL + +W+ Y E+ + ++ AR + +RA AL + + +L
Sbjct: 83 RSIYERALLVDHGFIPLWIQYIDSEIKWKN---INHARNLLDRATNALPRVDKLWFKYLL 139
Query: 391 LE 392
LE
Sbjct: 140 LE 141
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 184 EHERARVIYKYALDH------IPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
E RA I+K LD+ I + IY A+ EK +G++ IE ++ KR+ +YE
Sbjct: 317 EASRANEIFKLLLDNKTNKLEISDKTKSSIYTAFVEFEKNFGNKDSIEQSVLIKRRIKYE 376
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARA 297
+E+ ++P +YD+W+ Y+ LL++ N + +++ N+ K +
Sbjct: 377 QEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSI------------ 424
Query: 298 IYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVH-----VKVWMNYA 352
+ R + +W A+ + E+ D RE+ L+ H KVW+ Y+
Sbjct: 425 -------KWRRYIMFWIWYAFWE-EMTNNNPDSAREIWNNCLKVIPHKSFTFAKVWIGYS 476
Query: 353 QFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGD 403
+FE+ + ED ++ AR++ R A+ +S + ++ + + + + E + GD
Sbjct: 477 EFELRNS-EDGLAKARKILGR---AIGQTSINKPKIKIFKYYIDLEKKLGD 523
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 165/420 (39%), Gaps = 118/420 (28%)
Query: 149 LFIAFAKFEEGQREKYGDRAGIEDVIVSKRKFQYEEHER-----ARVIYKYALDHIPKDR 203
++ AF +FE+ +G++ IE ++ KR+ +YE+ + +KY
Sbjct: 346 IYTAFVEFEKN----FGNKDSIEQSVLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSN 401
Query: 204 TAEIYKAY------TIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNP-------NNY--- 247
+++ A+ +H+K + + F +EE N+NP NN
Sbjct: 402 KSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAF-WEEMTNNNPDSAREIWNNCLKV 460
Query: 248 ---------DAWFDY--LRLLEDEGNADLIRETYERAIA----NIPPTK----FAELESL 288
W Y L E R+ RAI N P K + +LE
Sbjct: 461 IPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIGQTSINKPKIKIFKYYIDLEKK 520
Query: 289 LGDMERARAIYE--LAISQPRLDMPELVWKAYIDFEVG---------------------- 324
LGD R R +++ L +S ELV + Y++FE
Sbjct: 521 LGDWNRVRLLFQKWLEVSLLTTSSSELVIEKYVEFESSIEEYDRCDSILSSARQLSENPE 580
Query: 325 --------------------QGERDKVRELHERLLERTVHVKVWMNYAQFEMS------- 357
+ + DK+RE++ LL++ + W+++A FE S
Sbjct: 581 YSSSFNLQRLLEITVEFYKEEMQYDKIREIYRALLDKDPNAHNWISFALFESSIPSAEQL 640
Query: 358 -------------SGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDD 404
+ DE + R +FE A K +KE R++++EAW++FE +G D
Sbjct: 641 EEYLQGDNEEFEATVDESQIESTRNIFEEAMTYFKDKDDKESRLVIIEAWRDFEEVNGSD 700
Query: 405 ESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAK-PN--LKLLEKAKAW 461
ES +K+ +LP +KR + E EE DYIFP+DE+ K P K L AK W
Sbjct: 701 ESLSKVTKRLPVIVRKRRTVGSIE------EEYIDYIFPDDESKKLPGKMSKFLANAKKW 754
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 237 EEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK-----FAELESLLGD 291
E ++ N + W Y++L N + R ERAI +P + + E +L +
Sbjct: 145 ERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKN 204
Query: 292 MERARAIYELAIS-QPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMN 350
RA++E + P VW AYI+FE E++ VR + ++ + + W
Sbjct: 205 YPMVRAVFERWLDWHPDTS----VWDAYINFEARYEEKENVRTIFKKYVHEFPNAGTWYK 260
Query: 351 YAQFEMSSGDEDSVSLARRVFERANQALKASSEK-----EERVMLLEAWKEFEAQHGDDE 405
+ ++EM + D V+ R VFE A L ++ + EE ++ +W +E G +
Sbjct: 261 WIKYEM-ENNRDDVNTVRAVFESAVDTLLSNKSEENDDDEEFATIISSWTSWEVSCG-EA 318
Query: 406 SRA 408
SRA
Sbjct: 319 SRA 321
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 149/358 (41%), Gaps = 98/358 (27%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGE-ENLD-------EKLFIAFAKFEEGQREKYGDRAGI 170
FE ++G R VY A++ +NL KL +FA +E Q
Sbjct: 208 FENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQ---------- 257
Query: 171 EDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTI-HEKKYGDRAGIEDVIV 229
+E+ER+ +Y+ A++ P + ++ KA + EK++GD IE+ I
Sbjct: 258 ------------QEYERSSALYQIAIEKWPSN---QLLKAGLLDFEKQFGDINSIEETIS 302
Query: 230 SKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIA-------------- 275
KRK +YE +++N +YD W+ YL L+ E I +T+E+AI
Sbjct: 303 YKRKMEYETILSNNAYDYDTWWLYLDLI-SESFPKQIMQTFEKAIVDSRPKELSKNVQWK 361
Query: 276 --------------------------------NIPPTK---FAELESLLG-------DME 293
+I P K F+++ + D+
Sbjct: 362 RYIYLWMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVP 421
Query: 294 RARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLE-RTVHVKVWMNYA 352
+AR I AI L +K YI+ EV E D+VR+++E+ +E + +++W Y
Sbjct: 422 KARKILGKAIG---LCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYG 478
Query: 353 QFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKL 410
+ E + GD D V R ++ A KE +++LL+ + FE + + E KL
Sbjct: 479 ELEENLGDWDRV---RGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKL 533
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 42/236 (17%)
Query: 264 DLIRETYERAIANIPP-----TKFAELESLLGDMERARAIYELAISQPRLDMPE----LV 314
D +R+ YE+ I P +++ ELE LGD +R R IY +A+ + + + ++
Sbjct: 454 DRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVL 513
Query: 315 WKAYIDFEVGQGERDKVRELHERLLERTVHV-KVWMNYAQFEMSSGDE----DSVSL--- 366
+ YI FE E +K R+L+ R LE + + W+ +A ++ S+ E D L
Sbjct: 514 LQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSE 573
Query: 367 -----------------ARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAK 409
AR+VFE A K +K+ R+ +LEA K++E +G + +
Sbjct: 574 NVDEDIEFEITDENKLEARKVFEEAIVFFKEKDDKQGRLSILEALKDYEETYGTELDQET 633
Query: 410 LNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL--KLLEKAKAWKK 463
+ + P+ KK V+ N GVE EE DYIFP+D K LE AK WK+
Sbjct: 634 VKKRFPKVIKK-VRLQN--GVE---EEFVDYIFPDDIDDDKPKPSKFLELAKKWKQ 683
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 253 YLRLLEDEGNADLI---RETYERAIANIPPT-----KFAELESLLGDMERARAIYELAIS 304
++R ++ E I R RAI+ +P K+ +E L ++E R++Y S
Sbjct: 102 WIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCS 161
Query: 305 -QPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDS 363
+P ++ W +++DFE+ Q + VRE++ + + ++ W+ + +FE G+ +
Sbjct: 162 LEPGVN----AWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTE- 216
Query: 364 VSLARRVFERA 374
R V+ A
Sbjct: 217 --FTRSVYSLA 225
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 284 ELESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHER-LLERT 342
+LE L R R YE + + RLDM + W Y FE+ Q + + R + ER LL +
Sbjct: 39 DLEELREYQRRKRTEYEGYLKRNRLDMGQ--WIRYAQFEIEQHDMRRARSIFERALLVDS 96
Query: 343 VHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQAL 378
+ +W+ Y E+ ++ AR + RA L
Sbjct: 97 SFIPLWIRYIDAELKV---KCINHARNLMNRAISTL 129
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 19/181 (10%)
Query: 231 KRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAI----ANIPP-TKFAEL 285
+++ +YE + N + W Y + ++ + R +ERA+ + IP ++ +
Sbjct: 49 RKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDA 108
Query: 286 ESLLGDMERARAIYELAISQ-PRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVH 344
E + + AR + AIS PR+D +W Y+ E + VR L+ +
Sbjct: 109 ELKVKCINHARNLMNRAISTLPRVDK---LWYKYLIVEESLNNVEIVRSLYTKWCSLEPG 165
Query: 345 VKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDD 404
V W ++ FE+ + + V R ++ + A ++ W FE +HG+
Sbjct: 166 VNAWNSFVDFEIRQKNWNGV---REIYSKYVMA-------HPQMQTWLKWVRFENRHGNT 215
Query: 405 E 405
E
Sbjct: 216 E 216
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 118 VFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSK 177
F E+N + + KVYER +E F E I +KF ++YG +
Sbjct: 728 TFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKF----VKRYGGK---------- 773
Query: 178 RKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
+ ERAR +++ AL++ P+ +Y Y E+++G ++KR
Sbjct: 774 ------KLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHG---------LAKRAMGIY 818
Query: 238 EEVNSNPNNYDAWFDY-LRLLEDEGNADL--IRETYERAIANIP-------PTKFAELES 287
+ S + D + Y + + + N L R YERA+ ++P +FA +E
Sbjct: 819 DRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMER 878
Query: 288 LLGDMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
LG+++RARAIY A PR++ PE W+ + DFE+ G D RE+
Sbjct: 879 KLGEIDRARAIYAHASQFCDPRIE-PEF-WQEWNDFEIETGSEDTFREM 925
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 118 VFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSK 177
F E+N + + KVYER +E F E I +KF ++YG +
Sbjct: 728 TFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKF----VKRYGGK---------- 773
Query: 178 RKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
+ ERAR +++ AL++ P+ +Y Y E+++G ++KR
Sbjct: 774 ------KLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHG---------LAKRAMGIY 818
Query: 238 EEVNSNPNNYDAWFDY-LRLLEDEGNADL--IRETYERAIANIP-------PTKFAELES 287
+ S + D + Y + + + N L R YERA+ ++P +FA +E
Sbjct: 819 DRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMER 878
Query: 288 LLGDMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
LG+++RARAIY A PR++ PE W+ + DFE+ G D RE+
Sbjct: 879 KLGEIDRARAIYAHASQFCDPRIE-PEF-WQEWNDFEIETGSEDTFREM 925
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 84/328 (25%), Positives = 135/328 (41%), Gaps = 53/328 (16%)
Query: 57 EKAKAWKKAMEEKQGNKIGEEGANKENEEEERDKERDREE-EDERKDEGDRDSDTTYGMR 115
E+A KK+ +E++ K E EE D R E ED + S + ++
Sbjct: 1568 EQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESAEDFDRLVLSSPSSSLLWLQ 1627
Query: 116 ELVFEEQNGFVSGARKVYERAVEF--FGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDV 173
+ F Q + AR V ERA++ F EE +++A E YG + + V
Sbjct: 1628 YMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN----MYGSQESLTKV 1683
Query: 174 IVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRK 233
+R QY E + + A+IY +K+ + + + ++ ++
Sbjct: 1684 F--ERAVQYNEPLKVFL------------HLADIYT----KSEKFQEAGELYNRML--KR 1723
Query: 234 FQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP-------TKFAELE 286
F+ E+ V W Y L G A+ +RA+ +P KFA+LE
Sbjct: 1724 FRQEKAV---------WVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQLE 1774
Query: 287 SLLGDMERARAIYE--LAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVH 344
LGD ERARAI+E L+I R D VW YID + G + + R + ER++ ++
Sbjct: 1775 FQLGDAERARAIFESTLSIYPKRTD----VWSVYIDMIIKHGSQKEARAIFERVIHLSLA 1830
Query: 345 VK----VWMNYAQFEMSSGDEDSVSLAR 368
K + Y +E G E V +
Sbjct: 1831 PKRMKFFFKRYLDYEKQHGSEKDVQAVK 1858
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 40/260 (15%)
Query: 118 VFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSK 177
+F E++ + + K YER + F N+ + KF +YG R
Sbjct: 526 MFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIS----RYGGR---------- 571
Query: 178 RKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
+ ERAR +++ ALD P +Y Y E+++G + V R +
Sbjct: 572 ------KLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWG--LARHAMAVYDRATRAV 623
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLLG 290
E YD + Y++ + R Y++AI + +FA++E LG
Sbjct: 624 EPAQ----QYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLG 679
Query: 291 DMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVRELH--ERLLERTVHVK 346
+++RARAIY I PR W+ + DFEV G D +RE+ R ++ T + +
Sbjct: 680 EIDRARAIYSFCSQICDPRTT--GAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQ 737
Query: 347 V-WMNYAQFEMSSGDEDSVS 365
V +M ++S +VS
Sbjct: 738 VNFMASQMLKVSGSATGTVS 757
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 250 WFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARAIYELAI 303
W DY + L D+G R T++RA+ +P T+ + + L R+ + E A+
Sbjct: 113 WLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAV 166
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 40/260 (15%)
Query: 118 VFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSK 177
+F E++ + + K YER + F N+ + KF +YG R
Sbjct: 526 MFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIS----RYGGR---------- 571
Query: 178 RKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
+ ERAR +++ ALD P +Y Y E+++G + V R +
Sbjct: 572 ------KLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWG--LARHAMAVYDRATRAV 623
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLLG 290
E YD + Y++ + R Y++AI + +FA++E LG
Sbjct: 624 EPAQ----QYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLG 679
Query: 291 DMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVRELH--ERLLERTVHVK 346
+++RARAIY I PR W+ + DFEV G D +RE+ R ++ T + +
Sbjct: 680 EIDRARAIYSFCSQICDPR--TTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQ 737
Query: 347 V-WMNYAQFEMSSGDEDSVS 365
V +M ++S +VS
Sbjct: 738 VNFMASQMLKVSGSATGTVS 757
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 250 WFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARAIYELAI 303
W DY + L D+G R T++RA+ +P T+ + + L R+ + E A+
Sbjct: 113 WLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAV 166
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 133/343 (38%), Gaps = 82/343 (23%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKR 178
FE + G R VY A++ A + E + E D + V SK
Sbjct: 204 FEVRYGSTKTVRSVYSLALD-------------ALIAYSESRNELVDDCINL-IVEFSKW 249
Query: 179 KFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
+ +E+ R++ + + A+ PK T A E+++G +E+ I+ RK YE+
Sbjct: 250 EALQKEYIRSKSLLEIAIQKWPKSNTLN--NALLQFEREHGTAETLENTIILNRKKHYED 307
Query: 239 EVNSNPNNYDAWFDYLRLLEDE-------------------------------------- 260
+N +YD W YL+LLE+
Sbjct: 308 ILNEKVYDYDTWLLYLQLLENNYPKLVMEAFSNVLNAAIPTSRTKDKYWKQYILIWIKYL 367
Query: 261 -------GNADLIRETYERAIANIPP----------TKFAELESLLGDMERARAIY--EL 301
+ L + +E I NI P +AE E ++E+AR+I L
Sbjct: 368 TFLELTINDIPLCGQKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNLEKARSILGRSL 427
Query: 302 AISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLER-TVHVKVWMNYAQFEMSSGD 360
+ R +K YID E E D+VR L+E L+ +++ W Y +FE S GD
Sbjct: 428 GLCPKR-----KTFKYYIDLETKLREFDRVRILYENFLKFDPLNLDTWRAYVEFEDSLGD 482
Query: 361 EDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGD 403
E V + + N L + K ++ LLE ++E ++ +
Sbjct: 483 EVRVRSVCMIPIQNNIGLFS---KSFQLHLLEILIDYEMEYQN 522
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 143/361 (39%), Gaps = 104/361 (28%)
Query: 199 IPKDRTAEIY-KAYTIHEKKYGD--RAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLR 255
IP RT + Y K Y + KY I D+ + +KF EE +++ N D F +
Sbjct: 346 IPTSRTKDKYWKQYILIWIKYLTFLELTINDIPLCGQKF--EELIHNIIPNDDFTFSKIW 403
Query: 256 LLEDEG-----NADLIRETYERAIANIPPTK----FAELESLLGDMERARAIYELAISQP 306
+L E N + R R++ P K + +LE+ L + +R R +YE +
Sbjct: 404 ILYAEFEIRQDNLEKARSILGRSLGLCPKRKTFKYYIDLETKLREFDRVRILYENFLKFD 463
Query: 307 RLDMPELVWKAYIDFEVGQGERDKVR------------------ELH------------- 335
L++ W+AY++FE G+ +VR +LH
Sbjct: 464 PLNLD--TWRAYVEFEDSLGDEVRVRSVCMIPIQNNIGLFSKSFQLHLLEILIDYEMEYQ 521
Query: 336 -----ERLLERTV-----HVKVWMNYAQFEMSSGDE---------------DSVSL---- 366
E LL++ V V+ W +YA +++ E DS +L
Sbjct: 522 NFDNIEPLLKKQVELSNFTVEAWTDYAMKKLTVPTEEQVQNFQIMKEERLKDSSALDEQE 581
Query: 367 --------------ARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNS 412
AR VFERA K E+R +L+++ +FE Q+GD SR ++
Sbjct: 582 IEFEFEITDNNKDNARDVFERALNYFKEIKRDEDRARILQSYVDFEGQYGDISSRQRIEK 641
Query: 413 KLPRRAK--KRVKTYNDEGVEEGWEEVFDYIFPEDEAAKPNL---KLLEKAKAWKKAMEE 467
+LP K + + + Y FP+DE K N+ +L A WK++ E
Sbjct: 642 RLPSIVNGIKDIDGLKTQNIT--------YTFPDDE-NKSNIDTSNILALAHKWKESQEA 692
Query: 468 K 468
K
Sbjct: 693 K 693
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 253 YLRLLEDE---GNADLIRETYERAIANIPPT-----KFAELESLLGDMERARAIYELAIS 304
++R +E E G + R ERAI +P K+ +E L + R +++ S
Sbjct: 98 WIRYIESELKLGYINHARNILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCS 157
Query: 305 QPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEMSSGDEDSV 364
L+ VW ++ DFEV Q + VR ++ + + W + FE+ G +V
Sbjct: 158 ---LEPAAHVWDSFTDFEVRQERYEDVRNIYSKYVLIHPQFSTWRKWINFEVRYGSTKTV 214
Query: 365 SLARRVFERANQALKASSE 383
R V+ A AL A SE
Sbjct: 215 ---RSVYSLALDALIAYSE 230
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 281 KFAELESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLE 340
++A E DM RAR+I+E A+ +P +W YI+ E+ G + R + ER +
Sbjct: 66 RYAVFEIEQHDMRRARSIFERALRVHISYVP--LWIRYIESELKLGYINHARNILERAIT 123
Query: 341 RTVHV-KVWMNYAQFEMSSGDEDSVSLARRVFER 373
+ V K+W Y E S D V R +F++
Sbjct: 124 KLPRVDKLWYKYLIVEESLAHFDIV---RNLFQK 154
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 65/330 (19%)
Query: 67 EEKQGNKIGEEGANKENEEEERDKERDREEE--------DERKDEGDR-----DSDTTYG 113
E+ I + +E E+++ +KE R EE E D+ DR + +
Sbjct: 1563 EKPHQATIKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSSILW 1622
Query: 114 MRELVFEEQNGFVSGARKVYERAVEF--FGEENLDEKLFIAFAKFEEGQREKYGDRAGIE 171
++ + F Q + AR V ERA++ F EE +++A E YG + +
Sbjct: 1623 LQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN----MYGSQESLT 1678
Query: 172 DVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSK 231
V +R QY E + + A+IY +K+ + + + ++
Sbjct: 1679 KVF--ERAVQYNEPLKVFL------------HLADIYA----KSEKFQEAGELYNRML-- 1718
Query: 232 RKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP-------TKFAE 284
++F+ E+ V W Y L A +RA+ +P KFA+
Sbjct: 1719 KRFRQEKAV---------WIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQ 1769
Query: 285 LESLLGDMERARAIYE--LAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERT 342
LE LGD ERA+AI+E L+ R D VW YID + G + VR++ ER++ +
Sbjct: 1770 LEFQLGDAERAKAIFENTLSTYPKRTD----VWSVYIDMTIKHGSQKDVRDIFERVIHLS 1825
Query: 343 VHVK----VWMNYAQFEMSSGDEDSVSLAR 368
+ K + Y +E G E V +
Sbjct: 1826 LAPKRMKFFFKRYLDYEKQHGTEKDVQAVK 1855
Score = 40.8 bits (94), Expect = 0.028, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAE----------L 285
++ V S+PN+ W Y+ + R ERA+ I + E L
Sbjct: 1608 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1667
Query: 286 ESLLGDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHV 345
E++ G E ++E A+ + + P V+ D + + EL+ R+L+R
Sbjct: 1668 ENMYGSQESLTKVFERAV---QYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQE 1724
Query: 346 K-VWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDD 404
K VW+ Y F + + + RV +RA + L + +E V ++ + + E Q GD
Sbjct: 1725 KAVWIKYGAFLLR---RSQAAASHRVLQRALECLPS----KEHVDVIAKFAQLEFQLGDA 1777
Query: 405 ESRAK 409
E RAK
Sbjct: 1778 E-RAK 1781
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 40/260 (15%)
Query: 118 VFEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSK 177
+F E++ + + K YER + F N+ + KF +YG R
Sbjct: 526 MFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIA----RYGGR---------- 571
Query: 178 RKFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYE 237
+ ERAR +++ ALD P +Y Y E+++G + V +R +
Sbjct: 572 ------KLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWG--LARHAMAVYERATRAV 623
Query: 238 EEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLLG 290
E YD + Y++ + R Y++AI + +FA++E LG
Sbjct: 624 EPAQ----QYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLG 679
Query: 291 DMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVRELH--ERLLERTVHVK 346
+++RARAIY I PR W+ + DFEV G D ++E+ R ++ T + +
Sbjct: 680 EIDRARAIYSFCSQICDPR--TTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQ 737
Query: 347 V-WMNYAQFEMSSGDEDSVS 365
V +M ++S +VS
Sbjct: 738 VNFMASQMLKVSGSATGTVS 757
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 250 WFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERARAIYELAI 303
W DY + L D+G R T++RA+ +P T+ + + L R+ + E A+
Sbjct: 113 WLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAV 166
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 72/296 (24%), Positives = 121/296 (40%), Gaps = 57/296 (19%)
Query: 93 DREEEDERKDEGDR-----DSDTTYGMRELVFEEQNGFVSGARKVYERAVEF--FGEENL 145
D + E D+ DR + + ++ + F Q + AR V ERA++ F EE
Sbjct: 1588 DPGRQPESADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQE 1647
Query: 146 DEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTA 205
+++A E YG + + V +R QY E + + A
Sbjct: 1648 KLNVWVALLNLEN----MYGSQESLTKVF--ERAVQYNEPLKVFL------------HLA 1689
Query: 206 EIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADL 265
+IY +KY + + + ++ ++F+ E+ V W Y + A
Sbjct: 1690 DIYTK----SEKYKEAGELYNRML--KRFRQEKAV---------WIKYGAFVLGRSQAGA 1734
Query: 266 IRETYERAIANIPP-------TKFAELESLLGDMERARAIYELAISQ--PRLDMPELVWK 316
+RA+ +P KFA+LE LGD+ERA+AI+E +S R D VW
Sbjct: 1735 SHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKRTD----VWS 1790
Query: 317 AYIDFEVGQGERDKVRELHERLLERTVHVK----VWMNYAQFEMSSGDEDSVSLAR 368
YID + G + VR++ ER++ ++ K + Y +E G E V +
Sbjct: 1791 VYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVK 1846
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 43/228 (18%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKR 178
F E N + + KV+ER VE F E + +KF + +YG
Sbjct: 776 FLEDNKYFEESFKVFERGVELFSYPVAFEIWNVYLSKFVK----RYGG------------ 819
Query: 179 KFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
+ ERAR +++ ALD P + Y E+++G + KR + E
Sbjct: 820 ----AKLERARDLFEQALDKCPARFCKPLMLMYGQLEEEHG---------LVKRAMKIYE 866
Query: 239 EVN---SNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESL 288
S + +D + Y+ R YERAI ++P +FA LE
Sbjct: 867 RATRAVSTDDRFDMYVFYIAKAAATFGLAATRPIYERAIESLPDRQTAEMCLRFAALERK 926
Query: 289 LGDMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
LG+++RAR IY A PR WK + FE+ G D RE+
Sbjct: 927 LGEIDRARVIYAHASQFCDPRTQTD--FWKEWNQFEIETGSEDTFREM 972
>sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RRP5 PE=1 SV=1
Length = 1729
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 56/283 (19%)
Query: 99 ERKDEGDRDSDTTYGMRELVFEEQNGFVSGARKVYERAVEF--FGEENLDEKLFIAFAKF 156
ER G+ +S + M + F+ Q + AR++ ERA++ F EE ++IA
Sbjct: 1465 ERLLIGNPNSSVVW-MNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNL 1523
Query: 157 EEGQREKYGDRAGIEDVIVSKRKFQ--YEEHERARVIYKYALDHIPKDRTAEIYKAYTIH 214
E +G +E+V ++ Y H + IY+ + D+ AE++KA
Sbjct: 1524 EN----TFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKF---DKAAELFKATA-- 1574
Query: 215 EKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAI 274
KK+G E+V+ + +W D+L +E A R A+
Sbjct: 1575 -KKFGG-----------------EKVSI----WVSWGDFLISHNEEQEA---RTILGNAL 1609
Query: 275 ANIP-------PTKFAELESLLGDMERARAIYE-LAISQP-RLDMPELVWKAYIDFEVGQ 325
+P KFA+LE GD ER R+++E L P R+D+ W Y+D EV
Sbjct: 1610 KALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVADAPKRIDL----WNVYVDQEVKA 1665
Query: 326 GERDKVRELHERLLERTV---HVKVWMN-YAQFEMSSGDEDSV 364
++ KV +L ER++ + + K + N + QFE S GDE ++
Sbjct: 1666 KDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESEGDEKTI 1708
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 186 ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPN 245
ER R +++ ALD P +Y Y E++ G + R ++ S+ +
Sbjct: 598 ERLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARH------AMRIYERATRAVSDED 651
Query: 246 NYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLLGDMERARAI 298
++ + Y+ R YERAIA +P KFAE+E LG+++RARAI
Sbjct: 652 RFEMFEFYITKSASNFGLPSTRPIYERAIAALPDHEAKEMCLKFAEMERRLGEIDRARAI 711
Query: 299 YELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
Y A PR + P W+ + FEV G D +E+
Sbjct: 712 YGHASQFCDPRTNAP--FWQKWEAFEVQHGNEDTFKEM 747
Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 28/157 (17%)
Query: 236 YEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERA 295
YE+++ NP W Y+ + G YE+A P A + S+L D +
Sbjct: 21 YEQDLLRNPGTIKPWLAYIEYKQQNGT------LYEQAFVGRPLD--ALIISILNDFQ-- 70
Query: 296 RAIYELAISQPRLDMPELVWKAYIDFEVGQ----------GERDKVRELHER-LLERTVH 344
+ E A Q L +WK Y++F E KV L ER L+
Sbjct: 71 --VMERACKQ--LPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERALILLNKM 126
Query: 345 VKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKAS 381
++W Y F + + V+ RR F+RA +AL +
Sbjct: 127 PRIWEMYLTFML---QQPLVTQTRRTFDRALRALPVT 160
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 243 NPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTK-----------FAELESLLGD 291
NPNN W + L D N +++ TY AIA I P K +A+ GD
Sbjct: 378 NPNNVIEWEKRVALWGD-NNVEIV-NTYTAAIAAINPKKAVGKFSELWVNYAKFYERGGD 435
Query: 292 MERARAIYELAISQPRLDMPEL--VWKAYIDFEVGQGERDKVRELHER 337
++ AR I+E A+ P + EL W + + E+ DK E+ +
Sbjct: 436 LDTARIIFEKAVKVPFKSVNELAETWCEWAEMELRSENFDKAVEIMAK 483
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 121 EQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKRKF 180
E+N + + K+YER V F E + KF +++
Sbjct: 525 EENAYFEDSFKIYERGVALFSYPVAFELWNLYLTKF--------------------VKRY 564
Query: 181 QYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEV 240
Q ER R +++ AL+ P + + IY Y E+K+G +KR E+
Sbjct: 565 QGTHMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGK---------AKRSISILEKA 615
Query: 241 NSNPNNYDAWFDY-LRLLEDEGNADLI--RETYERAIANIP-------PTKFAELESLLG 290
D Y + L++ N ++ R YE+AI ++ +FAE+E+ LG
Sbjct: 616 ADKVKTADRLAIYNVLLVKVALNYGVLATRTVYEKAIESLSDSEVKDMCLRFAEMETKLG 675
Query: 291 DMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQG 326
+++RAR IY PR++ WKA+ +FE+ G
Sbjct: 676 EIDRARLIYIHGSQYCDPRVETD--YWKAWQEFEIRYG 711
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 243 NPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPP-----------TKFAELESLLGD 291
N NN D W ++ LED+ ++ + + Y AI N+ P ++FA D
Sbjct: 348 NINNVDEWLRRVKFLEDD--SEKVVQVYTDAIKNVNPKLAHGSLGKLFSEFARFYENFDD 405
Query: 292 MERARAIYELAISQPRLDMPEL--VWKAYIDFEVGQGERDKVREL-----------HERL 338
+E++R I+E A P + EL VW + + E+ D R+L H
Sbjct: 406 LEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHISF 465
Query: 339 LERTV--------HVKVWMNYAQFEMSSGD-EDSVSLARRVFE 372
+ ++ K+WM Y E S G E + L RVFE
Sbjct: 466 FDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFE 508
>sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rrp5 PE=1 SV=1
Length = 1690
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 249 AWFDYLRLLEDEGNADLIRETYERAIANIPPT-------KFAELESLLGDMERARAIYE- 300
W Y L + A+ ER++ ++P + KFA LE GD ER R I+E
Sbjct: 1548 VWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFEG 1607
Query: 301 LAISQP-RLDMPELVWKAYIDFEVGQGERDKVRELHERLL 339
L S P RLD+ W ID E+ Q + VR L +RLL
Sbjct: 1608 LLSSYPKRLDL----WNVLIDMEMKQDDPSIVRRLFQRLL 1643
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 267 RETYERAIANIP-------PTKFAELESLLGDMERARAIYELA--ISQPRLDMPELVWKA 317
R+ YERAIA +P KFA++E LG+++RARAIY A PR P W
Sbjct: 662 RQIYERAIAALPDDEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPR-TTPAF-WTK 719
Query: 318 YIDFEVGQGERDKVREL 334
+ FEV G D +E+
Sbjct: 720 WEQFEVQHGNEDTFKEM 736
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 45/165 (27%)
Query: 228 IVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELES 287
+V+ F YE+++ +P + W Y+ G + ERA +P +
Sbjct: 19 LVTDDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRS------- 71
Query: 288 LLGDMERARAIYELAISQPRLDMPELVWKAYIDF----------EVGQGERDKVRELHER 337
Y+L WK Y+ F + E KV L ER
Sbjct: 72 -----------YKL-------------WKMYLTFRTKHIAKLNAAIFAAEYRKVNSLFER 107
Query: 338 -LLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKAS 381
L+ ++W Y +F M + V+L RR F+RA +AL +
Sbjct: 108 ALILLNKMPRIWEMYLKFLMK---QPLVTLTRRTFDRALRALPIT 149
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 242 SNPNNYDAWFDYL-RLLEDEGNADLIRETYERAIANIPPTKFAELESLL-GDME------ 293
S P ++ W YL + ++ + + + +R+ +E+A+ PP KFA++ L+ G++E
Sbjct: 564 SYPVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGCPP-KFAKIIYLMYGNLEEERGLA 622
Query: 294 -RARAIYELAI----SQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLE-------R 341
A IYE A + R DM + YI R+++ER + R
Sbjct: 623 RHAMRIYERATRAVSDEDRADM----FNFYITKSASNFGLPSTRQIYERAIAALPDDEAR 678
Query: 342 TVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQH 401
+ +K +A E G+ D AR ++ A+Q + W++FE QH
Sbjct: 679 DMCLK----FADMEKRLGEIDR---ARAIYGHASQFCDPRTTPA----FWTKWEQFEVQH 727
Query: 402 GDDES 406
G++++
Sbjct: 728 GNEDT 732
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 186 ERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPN 245
ER R +++ ALD P +Y Y E++ G + R ++ S+ +
Sbjct: 581 ERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARH------AMRIYERATRAVSDED 634
Query: 246 NYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLLGDMERARAI 298
++ + Y+ R YERAIA +P KFA++E LG+++RARAI
Sbjct: 635 RFEMFEFYITKSASNFGLTSTRPIYERAIAALPDQEAKEMCLKFADMERRLGEIDRARAI 694
Query: 299 YELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
Y A PR + W+ + FEV G D +E+
Sbjct: 695 YGHASQFCDPRTNAG--FWQKWEAFEVQHGNEDTFKEM 730
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 267 RETYERAIANIP-------PTKFAELESLLGDMERARAIYELA--ISQPRLDMPELVWKA 317
R YERAIA +P KFA++E LG+++RARAIY A PR + P W
Sbjct: 659 RPIYERAIAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTN-PGF-WTK 716
Query: 318 YIDFEVGQGERDKVREL 334
+ FEV G D +E+
Sbjct: 717 WDQFEVQHGNEDTYKEM 733
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 37/233 (15%)
Query: 228 IVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPT------- 280
+VS+ F YE+++ NP + W Y+ +G ERA +P +
Sbjct: 16 LVSEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMY 75
Query: 281 ------KFAELESLL--GDMERARAIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVR 332
++L + + + ++ +++E A+ MP +W+ Y+ F + Q R
Sbjct: 76 LRFRTKHVSKLNAAIFASEYQKVNSLFERALILLN-KMPR-IWEMYLKFLMQQPLVTHTR 133
Query: 333 ELHERLLER---TVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVM 389
+R L T H ++W Y F S+ E +V + RR + + + E+ +
Sbjct: 134 RTFDRALRALPITQHNRIWALYRPFANSAEGETAVKIWRRYMQVHPE------DAEDFIE 187
Query: 390 LLEAWKEF-EAQHGDDESRAKLNSKLPRRAKKRVKTYNDEGVEEGWEEVFDYI 441
LL A + EA H E LN+ PR K N +G E W E+ D +
Sbjct: 188 LLVAVGLYTEAVHKYIEI---LNN--PRFTSK-----NSKGHYELWSEMVDLL 230
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 242 SNPNNYDAWFDYL-RLLEDEGNADLIRETYERAIANIPPTKFAELESLL-GDME------ 293
S P ++ W YL + ++ + + + +R+ +E+A+ + PP KFA++ L+ G++E
Sbjct: 561 SYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPP-KFAKVIYLMYGNLEEERGLA 619
Query: 294 -RARAIYELAI----SQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVK-- 346
A IYE A + R DM + YI R ++ER + +
Sbjct: 620 RHAMRIYERATRAVADEDRADM----FNFYITKSASNFGLPSTRPIYERAIAALPDAEAR 675
Query: 347 -VWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDE 405
+ + +A E G+ D AR ++ A+Q + W +FE QHG+++
Sbjct: 676 DMCLKFADMEKRLGEIDR---ARAIYGHASQFCDPRTNPG----FWTKWDQFEVQHGNED 728
Query: 406 S 406
+
Sbjct: 729 T 729
>sp|Q9JLI8|SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus
musculus GN=Sart3 PE=2 SV=1
Length = 962
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 237 EEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERAR 296
EE+++ N +Y+ + +RLL EG +R ++ P T+ LE L
Sbjct: 103 EEQLSINGYDYNCHVELIRLLRLEGELSRVRAARQKMSELFPLTEELWLEWLHD------ 156
Query: 297 AIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEM 356
E++++ LD R+ V EL ER ++ + +W+ Y Q+ +
Sbjct: 157 ---EISMAMDGLD------------------REHVYELFERAVKDYICPNIWLEYGQYSV 195
Query: 357 SS-GDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEAQHGDDESRAKLNSKLP 415
G + + R VFERA ++ K + + EA++EFE+ + K++S
Sbjct: 196 GGIGQKGGLEKVRSVFERALSSVGLHMTKG--LAIWEAYREFESAIVEAARLEKVHSLF- 252
Query: 416 RRAKKRVKTYNDEGVEEGWEEVFDYIFPED--EAAKPNLKLLEKAKAWKKAMEEKQGNKI 473
R + + Y E +EE + PE ++ + L LEK K +++A+ + + ++
Sbjct: 253 -RRQLAIPLYEMEATFAEYEEWSEEPMPESVLQSYQKALGQLEKYKPYEEALLQAEAPRL 311
Query: 474 GE 475
E
Sbjct: 312 AE 313
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 152 AFAKFEEGQREKYGDRAGIEDVIVSKRKF--QYEEHERARVIYKYALDHIPKDRTAEIYK 209
FA++EE E E V+ S +K Q E+++ Y+ AL R AE Y+
Sbjct: 266 TFAEYEEWSEEPMP-----ESVLQSYQKALGQLEKYKP----YEEALLQAEAPRLAE-YQ 315
Query: 210 AYTIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNA-DLIRE 268
AY E K GD A I+ + +E + N D W Y + L+ + DL+
Sbjct: 316 AYIDFEMKIGDPARIQLI--------FERALVENCLVPDLWIRYSQYLDRQLKVKDLVLS 367
Query: 269 TYERAIANIPPTKFAELESLLG------DMERARAIYELAISQPRLDMPELV--WKAYID 320
+ RA+ N P T LL D + A +E A+S + + V W+ Y+D
Sbjct: 368 VHSRAVRNCPWTVALWSRYLLAMERHGLDHQTISATFENALSAGFIQATDYVEIWQVYLD 427
Query: 321 F 321
+
Sbjct: 428 Y 428
>sp|Q5REG1|SART3_PONAB Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo
abelii GN=SART3 PE=2 SV=1
Length = 981
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 237 EEEVNSNPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIPPTKFAELESLLGDMERAR 296
EE+++ N +Y+ D +RLL EG +R ++ P T+ LE L
Sbjct: 102 EEQLSINVYDYNCHVDLIRLLRLEGELTKVRMARQKMSEIFPLTEELWLEWLHD------ 155
Query: 297 AIYELAISQPRLDMPELVWKAYIDFEVGQGERDKVRELHERLLERTVHVKVWMNYAQFEM 356
E++++Q LD R+ V +L E+ ++ + +W+ Y Q+ +
Sbjct: 156 ---EISMAQDGLD------------------REHVYDLFEKAVKDYICPNIWLEYGQYSV 194
Query: 357 SS-GDEDSVSLARRVFERANQALKASSEKEERVMLLEAWKEFEA 399
G + + R VFERA ++ K + L EA++EFE+
Sbjct: 195 GGIGQKGGLEKVRSVFERALSSVGLHMTKG--LALWEAYREFES 236
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 25/179 (13%)
Query: 152 AFAKFEEGQREKYGDRAGIEDVIVSKRKFQYEEHERARVIYKYALDHIPKDRTAEIYKAY 211
FA++EE + I + ++ ++ E+ + Y+ AL R AE Y+AY
Sbjct: 283 TFAEYEEWSEDP------IPESVIQNYNKALQQLEKYKP-YEEALLQAEAPRLAE-YQAY 334
Query: 212 TIHEKKYGDRAGIEDVIVSKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNA-DLIRETY 270
E K GD A I+ + +E + N D W Y + L+ + DL+ +
Sbjct: 335 IDFEMKIGDPARIQLI--------FERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVH 386
Query: 271 ERAIANIPPTKFAELESLLG------DMERARAIYELAISQPRLDMPELV--WKAYIDF 321
RAI N P T LL D + +E A++ + + V W+AY+D+
Sbjct: 387 NRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAYLDY 445
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 119 FEEQNGFVSGARKVYERAVEFFGEENLDEKLFIAFAKFEEGQREKYGDRAGIEDVIVSKR 178
+ E+N + K YE V+ F ++ + KF QR AG++
Sbjct: 540 YLEENKYFEDMFKAYEHGVQLFLFPHVQDIWITYLTKF--IQR-----YAGMK------- 585
Query: 179 KFQYEEHERARVIYKYALDHIPKDRTAEIYKAYTIHEKKYGDRAGIEDVIVSKRKFQYEE 238
ER R +++ L +P + Y Y E++YG + Y+
Sbjct: 586 ------LERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYG--------LARHSMAVYDR 631
Query: 239 EVNS--NPNNYDAWFDYLRLLEDEGNADLIRETYERAIANIP-------PTKFAELESLL 289
S + + + Y+ + + RE + +AI +P KFA++E
Sbjct: 632 AAKSVDKEDRFKMYLLYIHRASEFFGVNQTREIFSKAIEQLPDQYVRDMCLKFADMEKKY 691
Query: 290 GDMERARAIYELA--ISQPRLDMPELVWKAYIDFEVGQGERDKVREL 334
G+++RAR+IY S PR M W + DFE G D +E+
Sbjct: 692 GEIDRARSIYIHGSQFSDPRTSM--FYWNTWSDFEKLHGNEDTFKEM 736
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 32/183 (17%)
Query: 225 EDVIV--SKRKFQYEEEVNSNPNNYDAWFDYLRLLEDEGNADLIRE-TYERAIANIPPTK 281
+D+I+ S YEE+V+ NP + + W YL +G+ R YERAI +P +
Sbjct: 21 DDIIIQPSIDDLPYEEDVSKNPYSVNCWLRYLEF--KQGSPQKQRNYIYERAIRELPRSY 78
Query: 282 FAELESLLGDMERARAIYELAI--------------SQPRLD-MPELVWKAYIDFEVGQG 326
+ LL ER AI I S LD MP +W Y +F + Q
Sbjct: 79 KIWHQYLL---ERTLAIRGKCILENSFEAVNTLFERSLVFLDKMPR-IWIEYCEFLMIQE 134
Query: 327 ERDKVRELHER---LLERTVHVKVWMNYAQFEMSSGDEDSVSLARRVFERANQALKASSE 383
+ R+ +R L T H ++W Y +F + + RV++R LK E
Sbjct: 135 KITLTRKTFDRALIALPVTQHYRIWNEYTKFILKRSIPSLTCI--RVYKR---YLKIQPE 189
Query: 384 KEE 386
K E
Sbjct: 190 KVE 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.131 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,451,133
Number of Sequences: 539616
Number of extensions: 10214588
Number of successful extensions: 175003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 1476
Number of HSP's that attempted gapping in prelim test: 86286
Number of HSP's gapped (non-prelim): 48433
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)