RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8682
(1956 letters)
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 102 bits (253), Expect = 1e-23
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 12/298 (4%)
Query: 1593 EYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAEN 1652
Y F E+NP+++ F G +L++GDLP+A+L EAA +Q+P + E W LG + AEN
Sbjct: 7 GYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAEN 66
Query: 1653 EQDPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSA 1712
EQ+ AI+AL +CL ++P N ALMA+++ FTNE+ A + L+D + P +
Sbjct: 67 EQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWL----RYTPAYAH 122
Query: 1713 YKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVL 1772
A + L S + +V L+L A R P+ LGVL
Sbjct: 123 LVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCG-LGVL 181
Query: 1773 FNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVR 1832
FNLS EYDKAVDCF +AL VRP+D LWN+LGA+LANGN+ EEAV AY AL+L PG++R
Sbjct: 182 FNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 241
Query: 1833 ARYNLGITCVHLGANTQAVEHFLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWYSLR 1890
+RYNLGI+C++LGA+ +AVEHFL ALN Q + G MS++IW +LR
Sbjct: 242 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGG-------AMSENIWSTLR 292
Score = 44.0 bits (102), Expect = 1e-04
Identities = 14/129 (10%), Positives = 24/129 (18%)
Query: 1803 LGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQA 1862
G AV + A+Q P + A LG T A+ L +
Sbjct: 25 EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKP 84
Query: 1863 ATHDGLTPHGLEPRAVKEMSDSIWYSLRGFHPPFGDKLPHINLTQPEWDQEKSRAHDCSD 1922
L + + + +
Sbjct: 85 DNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILG 144
Query: 1923 DDDDPSGYQ 1931
S +
Sbjct: 145 SLLSDSLFL 153
Score = 38.3 bits (87), Expect = 0.007
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 19/87 (21%)
Query: 317 QHGFVRARYNLGITCVHLGANTQAVEHFLTALNQQAAAHDGLTPHGLEPRADGLTPHGLE 376
Q G++R+RYNLGI+C++LGA+ +AVEHFL ALN Q + G
Sbjct: 236 QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGG-------------- 281
Query: 377 PRAVKEMSDSIWYSLRVVLSVLNRSDL 403
MS++IW +LR+ LS+L +SD
Sbjct: 282 -----AMSENIWSTLRLALSMLGQSDA 303
Score = 34.0 bits (76), Expect = 0.16
Identities = 16/157 (10%), Positives = 39/157 (24%), Gaps = 7/157 (4%)
Query: 738 LGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHR 797
G+ + AV F +A+Q P E YL ++ + R
Sbjct: 25 EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQ------AENEQELLAISALRR 78
Query: 798 KRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDV-DHRNITLWLKYTEL 856
+ DN + ++ + ++ + + +
Sbjct: 79 CLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGP 138
Query: 857 EMRNRQVNHARNLWDRAVTILPRANQFWYKYTYMEEM 893
R + +L+ + A + +
Sbjct: 139 SKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQ 175
Score = 32.1 bits (71), Expect = 0.62
Identities = 11/94 (11%), Positives = 26/94 (27%)
Query: 800 KAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELEMR 859
K ++ + + + A ++E A+ D +++ W +
Sbjct: 6 KGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAE 65
Query: 860 NRQVNHARNLWDRAVTILPRANQFWYKYTYMEEM 893
N Q A + R + + P
Sbjct: 66 NEQELLAISALRRCLELKPDNQTALMALAVSFTN 99
Score = 30.5 bits (67), Expect = 1.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 1100 MLEGDLVQSFLLRHLEAAAKQEPDNAEVWLSLGISLAENEQLLGEFWEHNLGNMQQAFRM 1159
+ EGDL + + EAA +Q+P + E W LG + AENEQ + +++ +
Sbjct: 30 LQEGDLPNA--VLLFEAAVQQDPKHMEAWQYLGTTQAENEQ-----ELLAISALRRCLEL 82
Query: 1160 DN 1161
Sbjct: 83 KP 84
Score = 30.5 bits (67), Expect = 2.2
Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 11/127 (8%)
Query: 1553 WNELNSHWKEMTESLGSGESLPHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALG 1612
+++ + + L ++ + + +S ++ Y A + + + LG
Sbjct: 188 YDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLG 247
Query: 1613 QEKLRQGDLPSAILYLEAAAKQEPDNAE-----------VWLSLGISLAENEQDPQAIAA 1661
+ G A+ + A + + +W +L ++L+ Q AA
Sbjct: 248 ISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAA 307
Query: 1662 LSKCLSI 1668
++ LS
Sbjct: 308 DARDLST 314
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 102 bits (254), Expect = 2e-23
Identities = 51/318 (16%), Positives = 90/318 (28%), Gaps = 12/318 (3%)
Query: 1609 FALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSI 1668
L + + GD +A + +QEPDN V L L + + ++ + +
Sbjct: 3 MELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ 62
Query: 1669 EPKNLEALMAISICF------------TNEACLHDALDTLKDKIRPGQESNPRPSAYKAD 1716
P EA + + A
Sbjct: 63 NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQ 122
Query: 1717 ALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLS 1776
A S L + + + ++ + +Q + LG +FN
Sbjct: 123 AYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ 182
Query: 1777 DEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYN 1836
E A+ F A+ + P+ + LG L + AV AY AL LSP N
Sbjct: 183 GEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN 242
Query: 1837 LGITCVHLGANTQAVEHFLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWYSLRGFHPPF 1896
L G A++ + A+ Q D + ++++
Sbjct: 243 LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 302
Query: 1897 GDKLPHINLTQPEWDQEK 1914
NL + +Q
Sbjct: 303 THADSLNNLANIKREQGN 320
Score = 98.6 bits (244), Expect = 4e-22
Identities = 61/293 (20%), Positives = 108/293 (36%), Gaps = 22/293 (7%)
Query: 1553 WNELNSHWKEMTESLGSGESLPHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALG 1612
+ + + + R + Y A + LG
Sbjct: 117 MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLG 176
Query: 1613 QEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKN 1672
QG++ AI + E A +P+ + +++LG L E +A+AA + LS+ P +
Sbjct: 177 CVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNH 236
Query: 1673 LEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTLTF 1732
++ + + + A+DT + I E P P LAN
Sbjct: 237 AVVHGNLACVYYEQGLIDLAIDTYRRAI----ELQPH--------FPDAYCNLANA---- 280
Query: 1733 RSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQV 1792
L + + Y A R CP+ D N L + ++AV +R AL+V
Sbjct: 281 ---LKEKGSVAEAEDCYNTALRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEV 334
Query: 1793 RPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLG 1845
P+ + + L + L + +EA+ Y A+++SP F A N+G T +
Sbjct: 335 FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 85.1 bits (209), Expect = 1e-17
Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 22/225 (9%)
Query: 1634 QEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDAL 1693
+P+ A W +LG + AI K ++++P L+A + + A+
Sbjct: 164 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 223
Query: 1694 DTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAA 1753
R S + LA + + + Y A
Sbjct: 224 AAYL---RALSLSPNHAVVH---------GNLACV-------YYEQGLIDLAIDTYRRAI 264
Query: 1754 RQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRP 1813
P PD L +A DC+ +AL++ P + N L
Sbjct: 265 ELQPH---FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 321
Query: 1814 EEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTAL 1858
EEAV Y AL++ P F A NL G +A+ H+ A+
Sbjct: 322 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI 366
Score = 78.2 bits (191), Expect = 2e-15
Identities = 46/291 (15%), Positives = 92/291 (31%), Gaps = 12/291 (4%)
Query: 1609 FALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSI 1668
L + L + + A KQ P AE + +LG E Q +AI L +
Sbjct: 37 LLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL 96
Query: 1669 EPKNLEALMAISICFTNEACLHDALDTLKDKIRPGQ---ESNPRPSAYKADALPSKLTRL 1725
+P ++ + ++ + A+ ++ + +
Sbjct: 97 KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKA 156
Query: 1726 ANHTLTFRSPLSSREIHQQVLSLY----LNAARQCPSQSI-----DPDVQNGLGVLFNLS 1776
P + + A +++ D LG + +
Sbjct: 157 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 216
Query: 1777 DEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYN 1836
+D+AV + AL + P+ + + L + A++ Y A++L P F A N
Sbjct: 217 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCN 276
Query: 1837 LGITCVHLGANTQAVEHFLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWY 1887
L G+ +A + + TAL D L R + +++
Sbjct: 277 LANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 327
Score = 55.1 bits (131), Expect = 5e-08
Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 14/205 (6%)
Query: 682 HKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSID-PDVQNGLGV 740
A K L + L L + ++ + A + S S + V L
Sbjct: 186 WLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLAC 245
Query: 741 LFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRK 800
++ D A+D +R A++++P F + L ++L ++ E D +
Sbjct: 246 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL------KEKGSVAEAEDCYNT--- 296
Query: 801 AFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELEMRN 860
+R + A + Q ++ A +Y +AL+V + +
Sbjct: 297 ----ALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 352
Query: 861 RQVNHARNLWDRAVTILPRANQFWY 885
++ A + A+ I P +
Sbjct: 353 GKLQEALMHYKEAIRISPTFADAYS 377
Score = 42.7 bits (99), Expect = 3e-04
Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 24/207 (11%)
Query: 711 HQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTELLV 770
+ + RQ P + V L + D++ A++ P E
Sbjct: 15 FEAAERHCMQLWRQEPD---NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS 71
Query: 771 YLFSSL---------------------DFQPPKQKISDPDELRDYQHRKRKAFEDNIRKN 809
L + DF ++ +A+ ++ N
Sbjct: 72 NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN 131
Query: 810 RMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHARNL 869
+ ++ +++ A++ Y +A++ W + ++ A +
Sbjct: 132 PDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHH 191
Query: 870 WDRAVTILPRANQFWYKYTYMEEMLEN 896
+++AVT+ P + + +
Sbjct: 192 FEKAVTLDPNFLDAYINLGNVLKEARI 218
Score = 42.0 bits (97), Expect = 7e-04
Identities = 12/136 (8%), Positives = 27/136 (19%)
Query: 1803 LGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQA 1862
L E A + P L ++ A+ Q
Sbjct: 5 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNP 64
Query: 1863 ATHDGLTPHGLEPRAVKEMSDSIWYSLRGFHPPFGDKLPHINLTQPEWDQEKSRAHDCSD 1922
+ + G + ++ ++I + +INL +
Sbjct: 65 LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY 124
Query: 1923 DDDDPSGYQPCTKLHN 1938
+
Sbjct: 125 VSALQYNPDLYCVRSD 140
Score = 38.5 bits (88), Expect = 0.006
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 711 HQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTELLV 770
++ + LY A P + L + + +A+ ++ A+++ P F +
Sbjct: 321 IEEAVRLYRKALEVFPE---FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYS 377
Query: 771 YL 772
+
Sbjct: 378 NM 379
Score = 30.0 bits (66), Expect = 3.1
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1111 LRHLEAAAKQEPDNAEVWLSLGISLAENEQL 1141
RH +QEPDN V L L + +L
Sbjct: 19 ERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 49
Score = 28.9 bits (63), Expect = 6.4
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 1111 LRHLEAAAKQEPDNAEVWLSLGISLA------ENEQLLGEFWEHNLGNMQQAFRMDNLLA 1164
+ A + +P + + +L +L E E + + N+
Sbjct: 257 IDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR 316
Query: 1165 EMRDIEAA 1172
E +IE A
Sbjct: 317 EQGNIEEA 324
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 82.1 bits (202), Expect = 2e-16
Identities = 33/230 (14%), Positives = 66/230 (28%), Gaps = 18/230 (7%)
Query: 1624 AILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISICF 1683
+ YL A + D + L + K L + + +
Sbjct: 5 SAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY---QKMLVTDLEYALDKKVEQDLW 61
Query: 1684 TNEACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTL-----TFRSPLSS 1738
+ + + TL+ + + N + L F L
Sbjct: 62 NH--AFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPC 119
Query: 1739 REIHQQVLSLYLN-----AARQCPSQSIDPDVQ---NGLGVLFNLSDEYDKAVDCFRSAL 1790
R Q+ + A + S S Q LG + ++ +A +R A
Sbjct: 120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAA 179
Query: 1791 QVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGIT 1840
Q+ P + + +N+L ++ + Y ++ + F A NL
Sbjct: 180 QLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229
Score = 73.3 bits (179), Expect = 1e-13
Identities = 25/212 (11%), Positives = 61/212 (28%), Gaps = 12/212 (5%)
Query: 1657 QAIAALSKCLSIEPKNLEALMAISICFTNEACLHDA------LDTLKDKIRPGQESNPRP 1710
Q+ L + ++ ++ + + +T+ L D D + ++
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNH 63
Query: 1711 SAYKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQ-SIDPD---VQ 1766
+ + + + + Y ++ + ++D
Sbjct: 64 AFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKS 123
Query: 1767 NGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQL 1826
+ LG++ N V S+ LG N+ +A Y A QL
Sbjct: 124 SQLGIISNKQTHTSAIVKPQSSSCS--YICQHCLVHLGDIARYRNQTSQAESYYRHAAQL 181
Query: 1827 SPGFVRARYNLGITCVHLGANTQAVEHFLTAL 1858
P + L I G + + ++ ++
Sbjct: 182 VPSNGQPYNQLAILASSKGDHLTTIFYYCRSI 213
Score = 51.3 bits (122), Expect = 9e-07
Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 27/217 (12%)
Query: 1624 AILYLEAAAKQE--PDNAEVWLSLGISLAENEQD-PQAIAALSKCLSIEPKNLEALMAIS 1680
I L+ AK P+ +EV +L + L Q + L +++ +
Sbjct: 68 QITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLG 127
Query: 1681 ICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTLTFRSPLSSRE 1740
I + + + D R
Sbjct: 128 IISNKQTHTSAIVKPQSSSCSY---ICQHCLVHLGDIA------------------RYRN 166
Query: 1741 IHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLW 1800
Q S Y +AA+ PS + N L +L + ++ + + ++ V+
Sbjct: 167 QTSQAESYYRHAAQLVPS---NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223
Query: 1801 NRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNL 1837
L +L+ + V+ F++ ++
Sbjct: 224 TNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHV 260
Score = 41.7 bits (97), Expect = 9e-04
Identities = 12/137 (8%), Positives = 31/137 (22%), Gaps = 8/137 (5%)
Query: 1781 KAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGIT 1840
++ R A ++ D + + + + Y L + +
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQ---DLYQKMLVTDLEYALDKKVEQD- 59
Query: 1841 CVHLGANTQAVEHFLTALNQQAATHDGLTPHGLEP---RAVKEMSDSIWYSLRGFHPPFG 1897
+ A + +A + L A + + F+
Sbjct: 60 -LWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLP 118
Query: 1898 DKLPHINLTQPEWDQEK 1914
++ L Q
Sbjct: 119 CRVKSSQLGIISNKQTH 135
Score = 41.3 bits (96), Expect = 0.001
Identities = 13/83 (15%), Positives = 26/83 (31%)
Query: 1611 LGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEP 1670
LG + A Y AA+ P N + + L I + I + ++++
Sbjct: 158 LGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF 217
Query: 1671 KNLEALMAISICFTNEACLHDAL 1693
A + + D +
Sbjct: 218 PFPAASTNLQKALSKALESRDEV 240
Score = 38.2 bits (88), Expect = 0.010
Identities = 11/83 (13%), Positives = 21/83 (25%)
Query: 1597 AEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDP 1656
NP ++E A + G + L + LGI +
Sbjct: 78 NRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTS 137
Query: 1657 QAIAALSKCLSIEPKNLEALMAI 1679
+ S S ++ +
Sbjct: 138 AIVKPQSSSCSYICQHCLVHLGD 160
Score = 33.2 bits (75), Expect = 0.32
Identities = 23/180 (12%), Positives = 51/180 (28%), Gaps = 13/180 (7%)
Query: 705 LSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPD 764
R Q S Y +AA+ PS + N L +L + ++ + + ++ V+
Sbjct: 162 ARYRNQTSQAESYYRHAAQLVPS---NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP 218
Query: 765 FTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFEDNIRKNRMVISNWIKYAQWEE 824
F L +L + + + + D I+ + E+
Sbjct: 219 FPAASTNLQKALSKALESRD----------EVKTKWGVSDFIKAFIKFHGHVYLSKSLEK 268
Query: 825 SQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHARNLWDRAVTILPRANQFW 884
++ ++ L N + T + + + T W
Sbjct: 269 LSPLREKLEEQFKELLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCW 328
Score = 32.1 bits (72), Expect = 0.85
Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 12/152 (7%)
Query: 750 KAVDCFRSALQVRPDFTE----LLVYLFSSLDFQPPKQKI--SDPDELRDY---QHRKRK 800
++ R A ++ D T+ S Q QK+ +D + D Q
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNH 63
Query: 801 AFEDNI---RKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELE 857
AF++ I + +N + ++ A Y + L + L
Sbjct: 64 AFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKS 123
Query: 858 MRNRQVNHARNLWDRAVTILPRANQFWYKYTY 889
+ +++ + V + + ++
Sbjct: 124 SQLGIISNKQTHTSAIVKPQSSSCSYICQHCL 155
Score = 31.7 bits (71), Expect = 1.1
Identities = 16/156 (10%), Positives = 35/156 (22%), Gaps = 19/156 (12%)
Query: 708 REIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTE 767
+ ++ A+ + + N L S Y + + + V
Sbjct: 62 NHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV 121
Query: 768 LLVYLFSSLDFQPPKQKISDPDEL-------------------RDYQHRKRKAFEDNIRK 808
L + Q I P R+ + + +
Sbjct: 122 KSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL 181
Query: 809 NRMVISNWIKYAQWEESQKQVDRARSIYERALDVDH 844
+ + A S+ Y R++ V
Sbjct: 182 VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF 217
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa
subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 308
Score = 70.0 bits (170), Expect = 5e-13
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 23/117 (19%)
Query: 813 ISNWIKYAQWEESQKQV--------DRARSIYERALDVDHRNITLWLKYTE--------- 855
+ W KY QWE+S R YE+ L V + +W + +
Sbjct: 8 VDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLL 67
Query: 856 -----LEMRNRQVNHARNLWDRAVTIL-PRANQFWYKYTYMEEMLENVAGKLFVFHR 906
+ + A N+++RA++ L + ++ Y EE +++R
Sbjct: 68 AEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNR 124
Score = 58.1 bits (139), Expect = 4e-09
Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 19/142 (13%)
Query: 784 KISDPDELRD---YQHRKRKAFEDNIRKNRMVISNWIKYAQWEESQ-------------- 826
+ S+P D R A+E + W + AQ+ E
Sbjct: 18 EKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAK 77
Query: 827 KQVDRARSIYERALDV-DHRNITLWLKYTELEMRNRQVNHARNLWDRAVTIL-PRANQFW 884
D A +IYERA+ +N+ L+ Y + E + ++++R + I +
Sbjct: 78 LFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVY 137
Query: 885 YKYTYMEEMLENVAGKLFVFHR 906
+Y E + +F +
Sbjct: 138 IQYMKFARRAEGIKSGRMIFKK 159
Score = 57.3 bits (137), Expect = 7e-09
Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 747 EYDKAVDCFRSALQVRPDFTEL----LVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAF 802
+ + + L V ++ YL S K +++ D +
Sbjct: 31 ITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSD---EAANIY 87
Query: 803 EDNIRK-NRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITL-WLKYTELEMRN 860
E I + + + YA +EES+ + ++ SIY R L ++ + TL +++Y + R
Sbjct: 88 ERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA 147
Query: 861 RQVNHARNLWDRAVTILPRANQFWYKYTYMEEMLEN 896
+ R ++ +A + + ME
Sbjct: 148 EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183
Score = 54.6 bits (130), Expect = 5e-08
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 10/106 (9%)
Query: 796 HRKRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVD----HRNITLWL 851
K FE ++K + + Y + + + R ++ER L ++ +W
Sbjct: 186 SVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWA 245
Query: 852 KYTELEMRNRQVNHARNLWDRAVTILPR------ANQFWYKYTYME 891
++ E + + R T +Y +M+
Sbjct: 246 RFLAFESNIGDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMD 291
Score = 33.4 bits (75), Expect = 0.22
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 4/97 (4%)
Query: 1748 LYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVR-PDDSRLWNRLGAS 1806
++ AA+ S + G + N D+A + + A+ + L+
Sbjct: 52 IWYEAAQYLEQSS---KLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADY 108
Query: 1807 LANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVH 1843
+ + E+ Y+ L + Y +
Sbjct: 109 EESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 59.8 bits (143), Expect = 7e-10
Identities = 30/250 (12%), Positives = 63/250 (25%), Gaps = 15/250 (6%)
Query: 1603 QNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAAL 1662
++E A L ++ L L + A + + A++ G+ A
Sbjct: 1 KSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDF 60
Query: 1663 SKCLSIEPKNLEAL----MAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADAL 1718
S+ L+I P E + ++ +A L+ R A
Sbjct: 61 SQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 120
Query: 1719 PSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQ----------CPSQSIDPDVQNG 1768
R + + L+ + + ++
Sbjct: 121 DKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEF 180
Query: 1769 LGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSP 1828
+ ++ + S LG + + A + A+ +
Sbjct: 181 YLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNV 240
Query: 1829 G-FVRARYNL 1837
FV RY L
Sbjct: 241 HNFVEHRYAL 250
Score = 47.9 bits (112), Expect = 5e-06
Identities = 34/229 (14%), Positives = 59/229 (25%), Gaps = 17/229 (7%)
Query: 1598 EDNPMQNETNA---FALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQ 1654
+ ++ A + G G A A PD EV+ LGI L +
Sbjct: 27 ASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 86
Query: 1655 DPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLKDKIRP------------ 1702
A A L ++P A + I A D L +
Sbjct: 87 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLY 146
Query: 1703 --GQESNPRPSAYKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQS 1760
Q+ + + + K + L + + L +A
Sbjct: 147 LAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAE 206
Query: 1761 IDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLAN 1809
+ LG + + D A F+ A+ + L+
Sbjct: 207 HLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSL 255
Score = 41.3 bits (95), Expect = 6e-04
Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 4/193 (2%)
Query: 1735 PLSSREIHQQVLSLYLNA-ARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVR 1793
PL + +L+ A + + + GVL++ A + F AL +R
Sbjct: 8 PLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR 67
Query: 1794 PDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEH 1853
PD ++N LG L + A EA+ + L+L P + A N GI + G + A +
Sbjct: 68 PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDD 127
Query: 1854 FLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWYSLRGFHPP---FGDKLPHINLTQPEW 1910
L L + + E +G + L
Sbjct: 128 LLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISE 187
Query: 1911 DQEKSRAHDCSDD 1923
R + D
Sbjct: 188 QTLMERLKADATD 200
Score = 39.0 bits (89), Expect = 0.004
Identities = 23/191 (12%), Positives = 48/191 (25%), Gaps = 14/191 (7%)
Query: 704 PLSSREIHQQVLSLYLNA-ARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVR 762
PL + +L+ A + + + GVL++ A + F AL +R
Sbjct: 8 PLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR 67
Query: 763 PDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFEDNIRKNRMVISNWIKYAQW 822
PD E+ Y + + D + + + +
Sbjct: 68 PDMPEVFNY------LGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD 121
Query: 823 EESQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHARNLWDRAVTILPRANQ 882
+ +Q D + L E + + L
Sbjct: 122 KLAQDD-------LLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWG 174
Query: 883 FWYKYTYMEEM 893
+ Y+ +
Sbjct: 175 WNIVEFYLGNI 185
Score = 37.9 bits (86), Expect = 0.007
Identities = 8/92 (8%), Positives = 18/92 (19%)
Query: 1584 NQRSSVSMHEYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWL 1643
+++ + ++ D Q + +E
Sbjct: 154 EKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNF 213
Query: 1644 SLGISLAENEQDPQAIAALSKCLSIEPKNLEA 1675
LG A A ++ N
Sbjct: 214 YLGKYYLSLGDLDSATALFKLAVANNVHNFVE 245
Score = 36.7 bits (83), Expect = 0.021
Identities = 18/97 (18%), Positives = 29/97 (29%)
Query: 1559 HWKEMTESLGSGESLPHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALGQEKLRQ 1618
E ++ G ++ + + S + T F LG+ L
Sbjct: 163 QHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSL 222
Query: 1619 GDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQD 1655
GDL SA + A N + L+ QD
Sbjct: 223 GDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQD 259
Score = 31.7 bits (70), Expect = 0.78
Identities = 12/96 (12%), Positives = 21/96 (21%)
Query: 681 AHKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGV 740
K + L + + L +A + LG
Sbjct: 158 KEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGK 217
Query: 741 LFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSL 776
+ + D A F+ A+ Y L
Sbjct: 218 YYLSLGDLDSATALFKLAVANNVHNFVEHRYALLEL 253
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 58.9 bits (142), Expect = 1e-09
Identities = 18/107 (16%), Positives = 32/107 (29%)
Query: 1612 GQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPK 1671
+ L +G L A+ L A K P +A + S L + +A L + + + P+
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 1672 NLEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADAL 1718
L + D G+ S +
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLS 109
Score = 57.7 bits (139), Expect = 3e-09
Identities = 15/88 (17%), Positives = 29/88 (32%)
Query: 1778 EYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNL 1837
+ +A++ A++ P D+ L + L E A E +++L P ++ L
Sbjct: 11 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 70
Query: 1838 GITCVHLGANTQAVEHFLTALNQQAATH 1865
A + TA
Sbjct: 71 RHLVKAAQARKDFAQGAATAKVLGENEE 98
Score = 46.6 bits (110), Expect = 1e-05
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 1807 LANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQAATHD 1866
L+ G + ++A+E A++ SP R + G +A E + ++
Sbjct: 7 LSEG-QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 65
Query: 1867 GLTPHGLEPRAVKEMSD 1883
G + +A + D
Sbjct: 66 GASQLRHLVKAAQARKD 82
Score = 36.9 bits (85), Expect = 0.015
Identities = 11/146 (7%), Positives = 36/146 (24%), Gaps = 16/146 (10%)
Query: 747 EYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFEDNI 806
+ +A++ A++ P L L D++ R + +I
Sbjct: 11 QLQQALELLIEAIKASPKDASLRSSFIELL------------CIDGDFE-RADEQLMQSI 57
Query: 807 RKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRN--ITLWLKYTELEMRNRQVN 864
+ + + ++ + A + + + M ++
Sbjct: 58 KLFPEYLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLS-MVSQDYE 116
Query: 865 HARNLWDRAVTILPRANQFWYKYTYM 890
L + + ++
Sbjct: 117 QVSELALQIEELRQEKGFLANDTSFS 142
Score = 35.8 bits (82), Expect = 0.035
Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 1102 EGDLVQSFLLRHLEAAAKQEPDNAEVWLSLGISLAENEQLLGEFWEHNLGNMQQAFRMDN 1161
EG L Q+ L L A K P +A + S L + E + +++
Sbjct: 9 EGQLQQA--LELLIEAIKASPKDASLRSSFIELLCIDGD-FERADEQLMQSIKLFPEYLP 65
Query: 1162 LLAEMRDIEAASQRPKPQQSAPISLLARQDDAREWANQFLEA 1203
+++R + A+Q + + + E +
Sbjct: 66 GASQLRHLVKAAQAR-KDFAQGAATAKVLGENEELTKSLVSF 106
Score = 31.9 bits (72), Expect = 0.70
Identities = 7/54 (12%), Positives = 13/54 (24%)
Query: 1609 FALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAAL 1662
+ + GD A L + K P+ L + +
Sbjct: 34 SSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQGA 87
Score = 30.4 bits (68), Expect = 1.9
Identities = 6/96 (6%), Positives = 14/96 (14%), Gaps = 9/96 (9%)
Query: 1553 WNELNSHWKEMTESLGSGESLPHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALG 1612
+L + L T + T +
Sbjct: 56 SIKLFPEYLPGASQLRHLVKAAQARKDFAQ---------GAATAKVLGENEELTKSLVSF 106
Query: 1613 QEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGIS 1648
+ D + + + S
Sbjct: 107 NLSMVSQDYEQVSELALQIEELRQEKGFLANDTSFS 142
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 334
Score = 53.5 bits (127), Expect = 1e-07
Identities = 19/223 (8%), Positives = 44/223 (19%), Gaps = 26/223 (11%)
Query: 1597 AEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDP 1656
E + + + + ++ + N W L + P
Sbjct: 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQP 195
Query: 1657 QAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKAD 1716
+ ++ K LE + A D D P
Sbjct: 196 DSGPQGRLPENVLLKELELV--------QNAFFTDPNDQSAWFYHRWLLGRAEPL----- 242
Query: 1717 ALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLS 1776
+ + + + + L +
Sbjct: 243 --------FRCELSVEK--STVLQSELESCKELQELEPENKW---CLLTIILLMRALDPL 289
Query: 1777 DEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEA 1819
+ + F + V P + + L + N + A
Sbjct: 290 LYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYA 332
Score = 50.4 bits (119), Expect = 1e-06
Identities = 33/274 (12%), Positives = 67/274 (24%), Gaps = 22/274 (8%)
Query: 1607 NAFALGQEKLRQGDLPS-AILYLEAAAKQEPDNAEVWLSLGISLAENEQDP--------- 1656
+A +K + G+L + PD A +W L E +
Sbjct: 30 SATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALV 89
Query: 1657 -QAIAALSKCLSIEPKNLEA--LMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAY 1713
+ L CL + PK+ + E L+ + + +
Sbjct: 90 KAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYR 149
Query: 1714 KADALPSK---------LTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPD 1764
+ A + L + S R L ++ Q
Sbjct: 150 RFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLL 209
Query: 1765 VQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTAL 1824
+ L +D D++ + L R + E+ +
Sbjct: 210 KELELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELE 269
Query: 1825 QLSPGFVRARYNLGITCVHLGANTQAVEHFLTAL 1858
+ + L L + +++F T
Sbjct: 270 PENKWCLLTIILLMRALDPLLYEKETLQYFSTLK 303
Score = 38.8 bits (89), Expect = 0.005
Identities = 20/162 (12%), Positives = 41/162 (25%), Gaps = 6/162 (3%)
Query: 738 LGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHR 797
+ + + ++ L PDF ++ Q + + S + +
Sbjct: 35 VFQKRQAGELDESVLELTSQILGANPDFAT--LWNCRREVLQHLETEKSPEESAALVKAE 92
Query: 798 KRKAFEDNIRKNRM--VISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYT- 854
E +R N + + + R + R L+ D RN W
Sbjct: 93 -LGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRF 151
Query: 855 ELEMRNRQVNHARNLWDRAVTILPRANQFWYKYTYMEEMLEN 896
D +T W+ + + L
Sbjct: 152 VAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHP 193
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 51.1 bits (120), Expect = 7e-07
Identities = 26/282 (9%), Positives = 64/282 (22%), Gaps = 14/282 (4%)
Query: 1598 EDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDN-----AEVWLSLGISLAEN 1652
++ M E NA Q + G+ A + A ++ P LG L
Sbjct: 6 REDTMHAEFNAL-RAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK 64
Query: 1653 EQDPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLK--DKIRPGQESNPRP 1710
+ +++A + + + ++ A+ L + +
Sbjct: 65 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124
Query: 1711 SAYKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSLYLNAARQC--PSQSIDPDVQNG 1768
+ + A + + + + + + Q ++
Sbjct: 125 HLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA 184
Query: 1769 LGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSP 1828
G L N + ++ + + S A +
Sbjct: 185 RGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEF 244
Query: 1829 GFVRAR----YNLGITCVHLGANTQAVEHFLTALNQQAATHD 1866
N+ + LG A +
Sbjct: 245 ANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRL 286
Score = 39.5 bits (90), Expect = 0.003
Identities = 26/245 (10%), Positives = 56/245 (22%), Gaps = 14/245 (5%)
Query: 1626 LYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISICFTN 1685
L E +Q P + + L + +A A+ + + +
Sbjct: 120 LINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLI 179
Query: 1686 EACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTLTFRSPLSSREIHQQV 1745
+ L E+ Y +D + + + ++ +
Sbjct: 180 QCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHT 239
Query: 1746 LSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQV------RPDDSRL 1799
+ + L E++ A + D +R
Sbjct: 240 AKPE------FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRN 293
Query: 1800 WNRLGASLANGNRPEEAVEAYHTALQLSP--GFVRARYNLGITCVHLGANTQAVEHFLTA 1857
L R +A AL+L+ GF+ G +
Sbjct: 294 LLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEL 353
Query: 1858 LNQQA 1862
+A
Sbjct: 354 EQHRA 358
Score = 35.3 bits (79), Expect = 0.081
Identities = 23/136 (16%), Positives = 35/136 (25%), Gaps = 9/136 (6%)
Query: 1792 VRPDDSR-LWNRLGASLA-NGNRPEEAVEAYHTALQLSP-----GFVRARYNLGITCVHL 1844
+R D +N L A +A N P+EA AL+ P + A LG
Sbjct: 5 IREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK 64
Query: 1845 GANTQAVEHFLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWYSLRGFHPPFGDKLPHIN 1904
G T+++ + L + L+ IN
Sbjct: 65 GELTRSLALMQQTEQMARQHDV--WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLIN 122
Query: 1905 LTQPEWDQEKSRAHDC 1920
E
Sbjct: 123 EQHLEQLPMHEFLVRI 138
Score = 28.3 bits (61), Expect = 9.6
Identities = 11/115 (9%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Query: 732 PDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDEL 791
+ + + ++ + A + R + L + ++ E
Sbjct: 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLG---EFEP 269
Query: 792 RDYQHRKRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRN 846
+ + ++R + N + Q + A+ + AL + +R
Sbjct: 270 AEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 48.8 bits (115), Expect = 2e-06
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 1778 EYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNL 1837
+Y +A C+ A+ P + + +PE+A+ AL+L V+A + L
Sbjct: 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 78
Query: 1838 GITCVHLGANTQAVEHFLTALNQQAATHDGLTPHGLEPRAVKEMSDSIWYSLR 1890
G + + + +A+ + A + L D I +LR
Sbjct: 79 GQCQLEMESYDEAIANLQRAYS-------------LAKEQRLNFGDDIPSALR 118
Score = 41.9 bits (97), Expect = 3e-04
Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 3/128 (2%)
Query: 1742 HQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWN 1801
+ + + Y A + P + + + ++A+ R AL++ +
Sbjct: 20 YPEAAACYGRAITRNPL---VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76
Query: 1802 RLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQ 1861
LG +EA+ A L+ + + + + + ++Q+
Sbjct: 77 FLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQE 136
Query: 1862 AATHDGLT 1869
+ H LT
Sbjct: 137 SELHSYLT 144
Score = 40.7 bits (94), Expect = 7e-04
Identities = 15/87 (17%), Positives = 33/87 (37%)
Query: 1611 LGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEP 1670
G P A A + P A + + + + +Q QA+A + L ++
Sbjct: 10 QGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDG 69
Query: 1671 KNLEALMAISICFTNEACLHDALDTLK 1697
++++A + C +A+ L+
Sbjct: 70 QSVKAHFFLGQCQLEMESYDEAIANLQ 96
Score = 35.3 bits (80), Expect = 0.042
Identities = 16/150 (10%), Positives = 43/150 (28%), Gaps = 19/150 (12%)
Query: 747 EYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFEDNI 806
+Y +A C+ A+ P ++ R + ++
Sbjct: 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQA------LADCRRALELDGQSV 72
Query: 807 RKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHA 866
+ Q + + D A + +RA + + +R +
Sbjct: 73 K-------AHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 125
Query: 867 RNLWDRAVTILPRANQFWYKYTYMEEMLEN 896
++ +R R +Q ++Y+ ++
Sbjct: 126 NSIEER------RIHQESELHSYLTRLIAA 149
Score = 32.6 bits (73), Expect = 0.27
Identities = 19/190 (10%), Positives = 56/190 (29%), Gaps = 11/190 (5%)
Query: 1638 NAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLK 1697
+A+ G L + P+A A + ++ P ++C+ A
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQA-LADC 61
Query: 1698 DKIRPGQESNPRPSAYKADALPSKLTRLANHTLTFRSPLS----SREIHQQVLSLYLNAA 1753
+ + + + ++ + S R + L A
Sbjct: 62 RRALELDGQSVKAHFFLGQCQ-LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIA 120
Query: 1754 RQCPSQSIDPDVQNGL-----GVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLA 1808
++ SI+ + + ++ E ++ ++ + + DD + + A
Sbjct: 121 KKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEA 180
Query: 1809 NGNRPEEAVE 1818
++ ++
Sbjct: 181 KHDKYMADMD 190
Score = 31.9 bits (71), Expect = 0.53
Identities = 14/137 (10%), Positives = 39/137 (28%), Gaps = 21/137 (15%)
Query: 724 QCPSQSIDPD---VQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQP 780
+ +D LG + YD+A+ + A + +
Sbjct: 61 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG---------- 110
Query: 781 PKQKISDPDELRDYQHRKRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERAL 840
D++ +K ++I + R+ + + + +R +R
Sbjct: 111 --------DDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNH 162
Query: 841 DVDHRNITLWLKYTELE 857
+ + + + +E
Sbjct: 163 EGHEDDGHIRAQQACIE 179
Score = 30.3 bits (67), Expect = 1.9
Identities = 9/44 (20%), Positives = 14/44 (31%)
Query: 1800 WNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVH 1843
G L G + EA Y A+ +P N + +
Sbjct: 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK 50
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 48.8 bits (115), Expect = 3e-06
Identities = 9/68 (13%), Positives = 23/68 (33%)
Query: 1789 ALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANT 1848
+ +++ A L R E A + A++L+ + + L +
Sbjct: 35 QIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDL 94
Query: 1849 QAVEHFLT 1856
+++T
Sbjct: 95 HEEMNYIT 102
Score = 46.1 bits (108), Expect = 3e-05
Identities = 22/241 (9%), Positives = 55/241 (22%), Gaps = 38/241 (15%)
Query: 1630 AAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISICFTN-EAC 1688
+V+ L +E+ +A + + N + + +
Sbjct: 34 VQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD 93
Query: 1689 LHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTLTFRSPLSSREIHQQVLSL 1748
LH+ ++ + I R + + L
Sbjct: 94 LHEEMNYITAII--------------------------EEQPKNYQVWHHRRVLVEWLRD 127
Query: 1749 YLNAARQCPSQSI----DPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLG 1804
+ + +D + L+ ++ +WN+
Sbjct: 128 PSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRY 187
Query: 1805 ASLANGNRPE------EAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTAL 1858
++N V+ ++L P A L G ++ L
Sbjct: 188 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG-LSKYPNLLNQLL 246
Query: 1859 N 1859
+
Sbjct: 247 D 247
Score = 39.2 bits (90), Expect = 0.004
Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 12/164 (7%)
Query: 733 DVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELR 792
DV + + + ++A R A+++ + + L L+
Sbjct: 44 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLL------------KSLQ 91
Query: 793 DYQHRKRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLK 852
H + I + W E + + L+ D +N W
Sbjct: 92 KDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 151
Query: 853 YTELEMRNRQVNHARNLWDRAVTILPRANQFWYKYTYMEEMLEN 896
+ + ++ D+ + R N W + ++
Sbjct: 152 RQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTG 195
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 45.6 bits (107), Expect = 2e-05
Identities = 25/218 (11%), Positives = 61/218 (27%), Gaps = 55/218 (25%)
Query: 1611 LGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEP 1670
G + D A+ A + ++ + ++G + +A A ++ ++ +
Sbjct: 11 EGVLAADKKDWKGALDAFSAV---QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK 67
Query: 1671 KNLEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRLANHTL 1730
A + + A+ LK+ + Q + YK L KL
Sbjct: 68 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALI--QLRGNQLIDYKILGLQFKLF------- 118
Query: 1731 TFRSPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSAL 1790
+V + ++ +E+ KA + A
Sbjct: 119 -------------------------------ACEVLYNIAFMYAKKEEWKKAEEQLALAT 147
Query: 1791 QVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSP 1828
++ + ++ ++A+E P
Sbjct: 148 SMKSEPRH------------SKIDKAMECVWKQKLYEP 173
Score = 40.2 bits (93), Expect = 8e-04
Identities = 17/128 (13%), Positives = 35/128 (27%), Gaps = 18/128 (14%)
Query: 1750 LNAARQCPSQSIDPDVQ--NGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASL 1807
A S DP + +G ++ + +A F ++ + + + G
Sbjct: 21 WKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLY 80
Query: 1808 ANGNRPEEAVEAYHTALQLSPG----------------FVRARYNLGITCVHLGANTQAV 1851
+ + A++ AL G YN+ +A
Sbjct: 81 YQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE 140
Query: 1852 EHFLTALN 1859
E A +
Sbjct: 141 EQLALATS 148
Score = 32.5 bits (73), Expect = 0.28
Identities = 21/164 (12%), Positives = 53/164 (32%), Gaps = 13/164 (7%)
Query: 738 LGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHR 797
GVL ++ A+D F V+ + + + + + E R
Sbjct: 11 EGVLAADKKDWKGALDAFS---AVQDPHSRICFNIGCMY------TILKNMTEAEKAFTR 61
Query: 798 KRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELE 857
+ + + +++ + K + A +D++ + L K E
Sbjct: 62 SINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACE 121
Query: 858 MRNR--QVNHARNLWDRAVTILPRANQFW--YKYTYMEEMLENV 897
+ + + W +A L A +++ +++ +E V
Sbjct: 122 VLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 165
Score = 32.1 bits (72), Expect = 0.42
Identities = 10/76 (13%), Positives = 24/76 (31%)
Query: 1777 DEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYN 1836
++ +D LQ + + + A ++A E A + ++ +
Sbjct: 100 LRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKID 159
Query: 1837 LGITCVHLGANTQAVE 1852
+ CV + V
Sbjct: 160 KAMECVWKQKLYEPVV 175
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 42.9 bits (100), Expect = 4e-05
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Query: 1769 LGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSP 1828
LG ++D A+ + A ++ P + A + E A+++
Sbjct: 10 LGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGR 69
Query: 1829 GFV-------RARYNLGITCVHLGANTQAVEHFLTAL 1858
+A +G + A+ + +L
Sbjct: 70 ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSL 106
Score = 39.5 bits (91), Expect = 7e-04
Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 6/112 (5%)
Query: 738 LGVLFNLSDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHR 797
LG ++D A+ + A ++ P + + D ++ R+ +
Sbjct: 10 LGNDAYKKKDFDTALKHYDKAKELDPTNMTY------ITNQAAVYFEKGDYNKCRELCEK 63
Query: 798 KRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITL 849
+ +N R + + + +++ A Y ++L L
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVL 115
Score = 30.2 bits (67), Expect = 0.93
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 1742 HQQVLSLYLNAARQCPSQSI----DPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDS 1797
L Y A P+ V G + +KA++ R + +
Sbjct: 20 FDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIA 79
Query: 1798 RLWNRLGASLANGNRPEEAVEAYHTALQLSP 1828
+ + R+G S + ++A+ Y+ +L
Sbjct: 80 KAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 38.9 bits (90), Expect = 8e-04
Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1624 AILYLEAAAKQ--EPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISI 1681
I+ LE + + + + L + ++ +A+ + L EP+N +A +
Sbjct: 55 GIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 114
Score = 35.9 bits (82), Expect = 0.010
Identities = 14/109 (12%), Positives = 28/109 (25%), Gaps = 8/109 (7%)
Query: 1736 LSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLS---DEYDKAVDCFRSALQV 1792
L S E + + + Q + D+ K + L
Sbjct: 9 LVSVEDLLKFEKKFQSEKAAGSV---SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK 65
Query: 1793 RPDDSRL--WNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGI 1839
+ + L E+A++ LQ P +A+ +
Sbjct: 66 GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 114
Score = 35.1 bits (80), Expect = 0.019
Identities = 6/74 (8%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 825 SQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHARNLWDRAVTILPRANQFW 884
S + + + ++ + + +Y +R R + + + +L
Sbjct: 11 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDD----IRKGIVLLEELLP-K 65
Query: 885 YKYTYMEEMLENVA 898
+ + +A
Sbjct: 66 GSKEEQRDYVFYLA 79
Score = 33.2 bits (75), Expect = 0.079
Identities = 12/108 (11%), Positives = 21/108 (19%), Gaps = 18/108 (16%)
Query: 745 SDEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFED 804
++ K F+S L Y RK
Sbjct: 12 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCL-------------VRTRYNDDIRKGIVL 58
Query: 805 NIRKNRMVISNWIKY-----AQWEESQKQVDRARSIYERALDVDHRNI 847
+ A K+ ++A L + +N
Sbjct: 59 LEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 106
Score = 32.8 bits (74), Expect = 0.12
Identities = 11/101 (10%), Positives = 26/101 (25%), Gaps = 11/101 (10%)
Query: 1602 MQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDP---QA 1658
M+ N + DL ++ + L + +
Sbjct: 2 MEAVLNEL------VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKG 55
Query: 1659 IAALSKCLSIEPKN--LEALMAISICFTNEACLHDALDTLK 1697
I L + L K + + +++ AL ++
Sbjct: 56 IVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 96
Score = 30.5 bits (68), Expect = 0.71
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 707 SREIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDFT 766
+ ++ + L + + D L V EY+KA+ R LQ P
Sbjct: 48 YNDDIRKGIVLLEELLPKGSKEE-QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 106
Query: 767 E 767
+
Sbjct: 107 Q 107
Score = 30.5 bits (68), Expect = 0.73
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Query: 1576 QWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQE 1635
++ V + E Q + F L R + A+ Y+ + E
Sbjct: 44 VRTRYNDDIRKGIVLLEELLPKGSKEEQRDYV-FYLAVGNYRLKEYEKALKYVRGLLQTE 102
Query: 1636 PDNAEVWLSLGISLAENEQD 1655
P N + + ++D
Sbjct: 103 PQNNQAKELERLIDKAMKKD 122
Score = 29.3 bits (65), Expect = 1.8
Identities = 2/57 (3%), Positives = 12/57 (21%), Gaps = 3/57 (5%)
Query: 1801 NRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVH---LGANTQAVEHF 1854
+ L + + + + + ++ V + +
Sbjct: 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLL 59
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 39.6 bits (91), Expect = 0.001
Identities = 23/117 (19%), Positives = 43/117 (36%)
Query: 1750 LNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLAN 1809
L+ S+S L + + EY KAV+C AL + + + R G +
Sbjct: 51 LSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLL 110
Query: 1810 GNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQAATHD 1866
N E A + L+++P AR + + + + + ++ A D
Sbjct: 111 MNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDRRTYANMFKKFAEQD 167
Score = 31.8 bits (71), Expect = 0.48
Identities = 16/113 (14%), Positives = 34/113 (30%)
Query: 1552 LWNELNSHWKEMTESLGSGESLPHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFAL 1611
L E KE S + + + + + ++ A NE +
Sbjct: 45 LEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRR 104
Query: 1612 GQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIAALSK 1664
G+ +L + SA E + P N L + + + ++ +
Sbjct: 105 GEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDRRTYA 157
Score = 30.7 bits (68), Expect = 1.0
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 1634 QEPDNAEVWLSLGISLAENEQDPQAIAALSKCLSIEPKNLEALMAISIC 1682
+ N + G + + A K L + P+N A + I +C
Sbjct: 93 LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMC 141
Score = 28.0 bits (61), Expect = 8.8
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 746 DEYDKAVDCFRSALQVRPDFTELLVYLFSSLDFQPPKQKISDPDELRDYQHRKRKAFEDN 805
+E++ A F L+V P + +F + +++ R R+ + +
Sbjct: 112 NEFESAKGDFEKVLEVNPQNKAARLQIFMCQ------------KKAKEHNERDRRTYANM 159
Query: 806 IRK 808
+K
Sbjct: 160 FKK 162
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 35.6 bits (81), Expect = 0.008
Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 7/77 (9%)
Query: 1769 LGVLFNLSDEYDKAVDCFRSALQ-------VRPDDSRLWNRLGASLANGNRPEEAVEAYH 1821
LG + +Y AL+ D + + L ++ ++A+
Sbjct: 11 LGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTK 70
Query: 1822 TALQLSPGFVRARYNLG 1838
L+L P RA NL
Sbjct: 71 KLLELDPEHQRANGNLK 87
Score = 27.9 bits (61), Expect = 4.1
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 1609 FALGQEKLRQGDLPSAILYLEAAAKQ-------EPDNAEVWLSLGISLAENEQDPQAIAA 1661
F LG+ + D L++E A +Q D V L ++ + +A+
Sbjct: 9 FELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLL 68
Query: 1662 LSKCLSIEPKNLEAL 1676
K L ++P++ A
Sbjct: 69 TKKLLELDPEHQRAN 83
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 35.9 bits (83), Expect = 0.009
Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 2/70 (2%)
Query: 1608 AFALGQEKLRQGDLPSAILYLEAAAKQEPDNA-EVWLSLGISLAENEQDPQAIAALSKCL 1666
A+ L + D + L K+ E L I + + A +
Sbjct: 42 AWGLIKST-DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLF 100
Query: 1667 SIEPKNLEAL 1676
E N +
Sbjct: 101 EHERNNKQVG 110
Score = 32.4 bits (74), Expect = 0.18
Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 7/105 (6%)
Query: 1734 SPLSSREIHQQVLSLYLNAARQCPSQSIDPDVQNGLG-VLFNLSDEYDKAVDCFRSALQV 1792
PL +++ ++L + + P+ +I G + ++ V +
Sbjct: 11 EPLYPQQL--EILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE 67
Query: 1793 RPDDSR--LWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARY 1835
R L+ L A T + +
Sbjct: 68 AESRRRECLYY-LTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 111
Score = 30.5 bits (69), Expect = 0.69
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Query: 1814 EEAVEAYHTALQLSPGFVR-ARYNLGITCVHLGANTQAVEHFLTAL-----NQQAA 1863
V+ + + R Y L I C LG + A + T N+Q
Sbjct: 55 RLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110
Score = 29.7 bits (67), Expect = 1.2
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 1579 SDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDN 1638
S ++R V + + E + E + L + G+ A Y++ + E +N
Sbjct: 48 STDVNDERLGVKILTDIYKEAESRRREC-LYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 106
Query: 1639 AEVW 1642
+V
Sbjct: 107 KQVG 110
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 37.3 bits (85), Expect = 0.016
Identities = 15/172 (8%), Positives = 43/172 (25%), Gaps = 8/172 (4%)
Query: 733 DVQNGLGVLFNLSDEYDKAVDCFRSALQV------RPDFTELLVYLFSSLDFQ-PPKQKI 785
D+ ++ L E + A D F A + V + +
Sbjct: 38 DLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAV 97
Query: 786 SDPDELRDYQHRKRKAFEDNIRKNRMVISNWIKYAQWEESQKQVDRARSIYERALDVDHR 845
+ + + K + + ++ + A Y +
Sbjct: 98 DSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVAL 156
Query: 846 NITLWLKYTELEMRNRQVNHARNLWDRAVTILPRANQFWYKYTYMEEMLENV 897
+ ++K +L+ + Q A +++ + + +
Sbjct: 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLC 208
Score = 31.5 bits (70), Expect = 1.0
Identities = 8/85 (9%), Positives = 18/85 (21%), Gaps = 20/85 (23%)
Query: 1776 SDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLS------PG 1829
S ++++A D + A +++ A
Sbjct: 30 SYKFEEAADLC--------------VQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDE 75
Query: 1830 FVRARYNLGITCVHLGANTQAVEHF 1854
G + AV+
Sbjct: 76 AGNTYVEAYKCFKSGGNSVNAVDSL 100
Score = 29.9 bits (66), Expect = 2.7
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 6/64 (9%)
Query: 1764 DVQNGLGVLFNLSDEYDKAVDCFRSALQV------RPDDSRLWNRLGASLANGNRPEEAV 1817
D+ ++ L E + A D F A + + +G AV
Sbjct: 38 DLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAV 97
Query: 1818 EAYH 1821
++
Sbjct: 98 DSLE 101
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Length = 112
Score = 33.7 bits (75), Expect = 0.057
Identities = 37/105 (35%), Positives = 58/105 (55%)
Query: 1593 EYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAEN 1652
+Y F +NP N G L+ +L A L EA ++EP+ E W SLG++ AEN
Sbjct: 4 DYPFEANNPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAEN 63
Query: 1653 EQDPQAIAALSKCLSIEPKNLEALMAISICFTNEACLHDALDTLK 1697
E+D AI AL+ ++PK++ A+++ TNE + AL +L+
Sbjct: 64 EKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLR 108
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 33.5 bits (75), Expect = 0.14
Identities = 19/157 (12%), Positives = 51/157 (32%), Gaps = 3/157 (1%)
Query: 1666 LSIEPKNLEALMAISICFTNEACLHDALDTLKDKIRPGQESNPRPSAYKADALPSKLTRL 1725
++ K+++ ++ IS N + I+ + +A A + +L
Sbjct: 13 ADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKL 72
Query: 1726 ANHTLTFRSPLSS--REIHQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAV 1783
L+ + + ++ ++ S + L + YD+A+
Sbjct: 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKE-YDQAL 131
Query: 1784 DCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAY 1820
+ A ++ P+D + L ++ +A
Sbjct: 132 ADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAA 168
Score = 32.4 bits (72), Expect = 0.26
Identities = 13/89 (14%), Positives = 29/89 (32%)
Query: 1762 DPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGNRPEEAVEAYH 1821
+G ++ AVD AL++ P +++ R ++A+
Sbjct: 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLK 135
Query: 1822 TALQLSPGFVRARYNLGITCVHLGANTQA 1850
A +++P + L + A
Sbjct: 136 KAQEIAPEDKAIQAELLKVKQKIKAQKDK 164
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 32.3 bits (72), Expect = 0.15
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 1742 HQQVLSLYLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWN 1801
L Y A + P + + + +Y KA + + ++PD + ++
Sbjct: 19 IDDALQCYSEAIKLDPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS 75
Query: 1802 RLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLG 1838
R A+L NR EEA Y L+ + + L
Sbjct: 76 RKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112
Score = 27.7 bits (60), Expect = 6.6
Identities = 7/73 (9%), Positives = 16/73 (21%)
Query: 1574 PHQWFSDFSRNQRSSVSMHEYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAK 1633
+ +++ + + D A E K
Sbjct: 40 YSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLK 99
Query: 1634 QEPDNAEVWLSLG 1646
E +N ++ L
Sbjct: 100 HEANNPQLKEGLQ 112
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase
PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 31.9 bits (71), Expect = 0.35
Identities = 18/92 (19%), Positives = 39/92 (42%)
Query: 1749 YLNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLA 1808
+ + ++I+ L +N + +Y KA+D L++ ++ + +LG +
Sbjct: 53 WDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANM 112
Query: 1809 NGNRPEEAVEAYHTALQLSPGFVRARYNLGIT 1840
EEA E + A L+P + R + +
Sbjct: 113 YFGFLEEAKENLYKAASLNPNNLDIRNSYELC 144
Score = 30.0 bits (66), Expect = 1.4
Identities = 12/61 (19%), Positives = 22/61 (36%)
Query: 1591 MHEYTFAEDNPMQNETNAFALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLA 1650
+ + N + LG + G L A L AA P+N ++ S + +
Sbjct: 87 IDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVN 146
Query: 1651 E 1651
+
Sbjct: 147 K 147
Score = 29.6 bits (65), Expect = 1.9
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 1649 LAENEQDPQAIAALSKCLSIEPKNLEALMAISIC 1682
+A L K S+ P NL+ + +C
Sbjct: 111 NMYFGFLEEAKENLYKAASLNPNNLDIRNSYELC 144
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR,
middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 179
Score = 31.4 bits (70), Expect = 0.75
Identities = 13/72 (18%), Positives = 17/72 (23%), Gaps = 2/72 (2%)
Query: 1800 WNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALN 1859
G A R E+A AL+ G V VE + A
Sbjct: 14 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFAT--ALVEDKVLAHT 71
Query: 1860 QQAATHDGLTPH 1871
+A
Sbjct: 72 AKAEAEIACGRA 83
>d1gmua2 d.58.38.1 (A:71-138) Urease metallochaperone UreE, C-terminal
domain {Klebsiella aerogenes [TaxId: 28451]}
Length = 68
Score = 28.9 bits (65), Expect = 0.82
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 12/65 (18%)
Query: 1790 LQVRPDDSRLWNRLGASLANGNRPEEAVEAYHTALQLSPGFVRARYN--LGITCVHLGAN 1847
VR DD + + +L GNR H LQ+ PG +R ++ L G
Sbjct: 5 SVVRCDDPFMLAKACYAL--GNR--------HVPLQIMPGELRYHHDHVLDDMLRQFGLT 54
Query: 1848 TQAVE 1852
+
Sbjct: 55 VTFGQ 59
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter
pylori [TaxId: 210]}
Length = 265
Score = 31.4 bits (69), Expect = 1.1
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 1762 DPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLANGN 1811
DP GLG ++ +A F A + ++ LG G
Sbjct: 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDL--KENSGCFNLGVLYYQGQ 48
Score = 31.0 bits (68), Expect = 1.2
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 1609 FALGQEKLRQGDLPSAILYLEAAAKQEPDNAEVWLSLGISLAENEQDPQAIA 1660
LG + ++ D A Y E A +LG+ + + + +
Sbjct: 6 VGLGAKSYKEKDFTQAKKYFEKACDL--KENSGCFNLGVLYYQGQGVEKNLK 55
Score = 28.3 bits (61), Expect = 9.7
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 731 DPDVQNGLGVLFNLSDEYDKAVDCFRSA 758
DP GLG ++ +A F A
Sbjct: 1 DPKELVGLGAKSYKEKDFTQAKKYFEKA 28
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.4 bits (67), Expect = 1.4
Identities = 17/117 (14%), Positives = 41/117 (35%)
Query: 1750 LNAARQCPSQSIDPDVQNGLGVLFNLSDEYDKAVDCFRSALQVRPDDSRLWNRLGASLAN 1809
+ +Q++ L + + A++ AL++ ++ + +R G +
Sbjct: 49 FSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLA 108
Query: 1810 GNRPEEAVEAYHTALQLSPGFVRARYNLGITCVHLGANTQAVEHFLTALNQQAATHD 1866
N E A + LQL P A+ L + + + + ++ A +
Sbjct: 109 VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE 165
Score = 28.5 bits (62), Expect = 5.2
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 1657 QAIAALSKCLSIEPKNLEALMAISIC 1682
A A K L + P N A +++C
Sbjct: 114 LARADFQKVLQLYPNNKAAKTQLAVC 139
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 28.7 bits (62), Expect = 3.7
Identities = 3/41 (7%), Positives = 8/41 (19%)
Query: 1803 LGASLANGNRPEEAVEAYHTALQLSPGFVRARYNLGITCVH 1843
E+ + + +P G +
Sbjct: 3 TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE 43
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
(Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Length = 544
Score = 29.3 bits (64), Expect = 6.0
Identities = 20/100 (20%), Positives = 42/100 (42%)
Query: 813 ISNWIKYAQWEESQKQVDRARSIYERALDVDHRNITLWLKYTELEMRNRQVNHARNLWDR 872
+ W++Y ++ S+ +DR S+Y + L V T L + + + L+
Sbjct: 371 VKKWLQYIFYDASEASIDRVLSLYPQTLSVGSPFRTGILNALTPQFKRVAAILSDMLFQS 430
Query: 873 AVTILPRANQFWYKYTYMEEMLENVAGKLFVFHRDSISQV 912
++ A + ++TY+ L N+ L FH + +
Sbjct: 431 PRRVMLSATKDVNRWTYLSTHLHNLVPFLGTFHGNELIFQ 470
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.399
Gapped
Lambda K H
0.267 0.0663 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 7,076,305
Number of extensions: 326282
Number of successful extensions: 923
Number of sequences better than 10.0: 1
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 127
Length of query: 1956
Length of database: 2,407,596
Length adjustment: 99
Effective length of query: 1857
Effective length of database: 1,048,326
Effective search space: 1946741382
Effective search space used: 1946741382
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.0 bits)