BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8684
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3
Length = 238
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 142/207 (68%), Gaps = 5/207 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV+ GTT +A ++ GV++GAD+RTT G+Y+ NR +KLT I D+I+CCRSG+AADTQA+
Sbjct: 29 EVSTGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAV 88
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D V+Y + + E+NEPPLV+ AA+LF+++ A IIIAGWD +GGQV
Sbjct: 89 ADAVTYQL----GFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQV 144
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y++P G++ RQ+ A+GGSGSSYI GYVD +R M K EC+ F L+LAM RD +SG
Sbjct: 145 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSG 204
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHF 219
G+I + ++ +E+ V +++ F
Sbjct: 205 GVIRLAAIQESG-VERQVLLGDQIPKF 230
>sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4
Length = 239
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 145/208 (69%), Gaps = 7/208 (3%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV+ GTT +A +++ GV++GAD+RTT G+Y+ NR +KLT I D I+CCRSG+AADTQA+
Sbjct: 30 EVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAV 89
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D V+Y + + E+NEPPLV+ AA+LF+++ A IIIAGWD +GGQV
Sbjct: 90 ADAVTYQL----GFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQV 145
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y++P G++ RQ+ A+GGSGSSYI GYVD +R M K+EC+ F L+LAM RD +SG
Sbjct: 146 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205
Query: 193 GLINIGVL-ENGKPMEKLVFTQEEVQHF 219
G+I + + E+G +E+ V +++ F
Sbjct: 206 GVIRLAAIAESG--VERQVLLGDQIPKF 231
>sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1
SV=3
Length = 238
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 142/204 (69%), Gaps = 5/204 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV+ GTT +A +++ GV++GAD+RTT G+Y+ NR +KLT I D+I+CCRSG+AADTQA+
Sbjct: 29 EVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAV 88
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D V+Y + + E+NEPPLV+ AA+LF+++ A IIIAGWD +GGQV
Sbjct: 89 ADAVTYQL----GFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQV 144
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y++P G++ RQ+ A+GGSGSSYI GYVD +R M K EC+ F L+LAM RD +SG
Sbjct: 145 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSG 204
Query: 193 GLINIGVLENGKPMEKLVFTQEEV 216
G+I + ++ +E+ V +++
Sbjct: 205 GVIRLAAIQQSG-VERQVLLGDQI 227
>sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1
Length = 239
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 143/208 (68%), Gaps = 7/208 (3%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV+ GTT +A +++ GV++GAD+RTT G+Y+ NR +KLT I D I+CCRSG+AADTQA+
Sbjct: 30 EVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAV 89
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D V+Y + + E+NEPPLV+ AA+LF+++ A IIIAGWD +GGQV
Sbjct: 90 ADAVTYQL----GFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQV 145
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y++P G++ RQ A+GGSGSSYI GYVD +R M K+EC+ F L+LAM RD +SG
Sbjct: 146 YSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205
Query: 193 GLINIGVL-ENGKPMEKLVFTQEEVQHF 219
G+I + + E G +E+ V +++ F
Sbjct: 206 GVIRLAAIAEPG--VERQVLLGDQIPKF 231
>sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6
PE=1 SV=1
Length = 214
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 4/197 (2%)
Query: 14 VTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAIS 73
V GT+ +A EY+ GV+MGAD+RTT G Y+ NR K+T I + IYCCRSG+AADTQAIS
Sbjct: 11 VDLGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAIS 70
Query: 74 DLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVY 133
D V Y++++ + E+ + P V AA+LFQ + SN+ + A II+AGWD +GG VY
Sbjct: 71 DYVRYYLEMHTS----ELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVY 126
Query: 134 ALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGG 193
+ G + +Q A+GGSGS+YI GY D +++ M K ECI+F++ L+LAM RD +SGG
Sbjct: 127 NISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGG 186
Query: 194 LINIGVLENGKPMEKLV 210
+I + +++ K++
Sbjct: 187 VIRLCIIDKNGVERKMI 203
>sp|P38624|PSB1_YEAST Proteasome subunit beta type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE3 PE=1 SV=2
Length = 215
Score = 180 bits (456), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 136/207 (65%), Gaps = 6/207 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV+ GT+ +A +++GV++GAD+RTT G Y+ NR +KLT++ D I+CCRSG+AADTQAI
Sbjct: 15 EVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAI 74
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+V YH++L Y P AA++F+++ N+ + A II+AG+D G+V
Sbjct: 75 ADIVQYHLEL-----YTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEV 129
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y +P G + + A+ GSGS++I GY DK +R NM K+E +DFIK LS A+ D +SG
Sbjct: 130 YTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSG 189
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHF 219
G+I + VL +E+L+F +E +
Sbjct: 190 GVIRMVVL-TAAGVERLIFYPDEYEQL 215
>sp|O43063|PSB1_SCHPO Probable proteasome subunit beta type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre3 PE=3 SV=1
Length = 226
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 133/200 (66%), Gaps = 7/200 (3%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
E+ GTT A Y++GV++ AD+RTT+G Y+ NR +KLT+++DNI+CCRSG+AADTQ +
Sbjct: 20 EIRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTV 79
Query: 73 SDLVSYHIDLDVAYGYR-EMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQ 131
+DL+ Y++ + YR + P V+ AA L ++ N+ A +I+AG+D GG
Sbjct: 80 ADLLKYYLSM-----YRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGD 134
Query: 132 VYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYAS 191
VY++P G L +Q A+GGSGS++I G+ D +R NM ++E ++F+K ++LAM RD +S
Sbjct: 135 VYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSS 194
Query: 192 GGLINIGVLENGKPMEKLVF 211
GG I + +L N ME+ F
Sbjct: 195 GGTIRMVIL-NKDGMERKFF 213
>sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1
SV=2
Length = 233
Score = 174 bits (440), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 131/217 (60%), Gaps = 10/217 (4%)
Query: 7 DISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTA 66
D++ + GTT I Y GV++GAD+RT+ G YV NR ++K+T+++DN+Y CRSG+A
Sbjct: 2 DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 61
Query: 67 ADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDT 126
AD+Q +SD V Y + + +P V +ANL + + +N+ + +I+ GWD
Sbjct: 62 ADSQVVSDYVRYFLHQHTI----QHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDK 117
Query: 127 VKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMA 186
+GG++Y +P G + Q A+GGSGSSY+ G+ D+ W+ NM K+E + +SLA+A
Sbjct: 118 YEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIA 177
Query: 187 RDYASGGLINI------GVLENGKPMEKLVFTQEEVQ 217
RD ASGG++ GV N P +KL EE++
Sbjct: 178 RDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELE 214
>sp|Q3SZC2|PSB9_BOVIN Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1
Length = 219
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 133/215 (61%), Gaps = 6/215 (2%)
Query: 7 DISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTA 66
D+ EV GTT +A E++ GV++G+D+R + G V NR +KL+ + +IYC SG+A
Sbjct: 10 DLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSA 69
Query: 67 ADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDT 126
AD QAI+D+ +Y ++L +G E+ EPPLV AAN+ + I A +++AGWD
Sbjct: 70 ADAQAIADMAAYQLEL---HGM-ELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQ 125
Query: 127 VKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMA 186
+GGQVY SG+L RQ A+GGSGS+YI GYVD ++ M +EC F ++LAM
Sbjct: 126 REGGQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMK 184
Query: 187 RDYASGGLINIGVLENGKPMEKLVFTQEEVQHFFN 221
RD +SGG+I + + G ++ V +E+ F++
Sbjct: 185 RDGSSGGVIYLATI-TGAGVDHRVILGDELPRFYD 218
>sp|Q8UW64|PSB9_ORYLA Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3
SV=1
Length = 217
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 6/210 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT IA E+ GV++G+D+R + G V NR KL+ + D IYC SG+AAD Q I
Sbjct: 14 EVKTGTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTI 73
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+++V+Y +D+ E++E P V AA L + I + A +I+AGWD GGQV
Sbjct: 74 AEMVNYQLDVHSL----EIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQV 129
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
+A G+LTRQ A+GGSGSSY+ G+VD E+R M K+EC F+ L+LAM RD +SG
Sbjct: 130 FA-TLGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSG 188
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFNH 222
G+ I ++ EK++ ++ FF+
Sbjct: 189 GVAYIVTIDEHSTDEKVILGN-DLPTFFDQ 217
>sp|P28065|PSB9_HUMAN Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2
Length = 219
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 132/215 (61%), Gaps = 6/215 (2%)
Query: 7 DISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTA 66
D+ EV GTT +A E++ GV+MG+D+R + G V NR +KL+ + + IYC SG+A
Sbjct: 10 DLPRAGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSA 69
Query: 67 ADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDT 126
AD QA++D+ +Y ++L +G E+ EPPLV AAN+ + I A +++AGWD
Sbjct: 70 ADAQAVADMAAYQLEL---HGI-ELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQ 125
Query: 127 VKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMA 186
+GGQVY G+LTRQ A+GGSGS++I GYVD ++ M +EC F ++LAM+
Sbjct: 126 REGGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMS 184
Query: 187 RDYASGGLINIGVLENGKPMEKLVFTQEEVQHFFN 221
RD +SGG+I + V ++ V E+ F++
Sbjct: 185 RDGSSGGVIYL-VTITAAGVDHRVILGNELPKFYD 218
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1
Length = 234
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 15 TCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISD 74
+ GTT I Y GV++GAD+RT+ G YV NR ++K+T+++DN+Y CRSG+AAD+Q +SD
Sbjct: 11 SMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSD 70
Query: 75 LVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYA 134
V Y + ++ +P V AANL + + +N+ + +II GWD +GG++Y
Sbjct: 71 YVRYFLHQHTI----QLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYG 126
Query: 135 LPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGL 194
+P G + Q A+GGSGSSY+ G+ D+ W+ M ++E + +SLA+ARD ASGG+
Sbjct: 127 IPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGV 186
Query: 195 I 195
+
Sbjct: 187 V 187
>sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2
SV=1
Length = 217
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT IA E++ GV++G+D+R + G V NR KL+ + D IYC SG+AAD Q I
Sbjct: 14 EVKTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTI 73
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+++V+Y +D+ E+ E P V AA L + I + A +I+AGWD GGQV
Sbjct: 74 AEMVNYQLDVHSI----EVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQV 129
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y + +G+L+RQ AVGGSGSSY+ G+VD E+R M K++C F+ LSLAM+RD +SG
Sbjct: 130 Y-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSG 188
Query: 193 GLINIGVLENGKPMEKLVFTQE 214
G+ + ++ EK + E
Sbjct: 189 GVAYLVTIDEKGAEEKCILGNE 210
>sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1
Length = 217
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT IA E++ GV++G+D+R + G V NR KL+ + D IYC SG+AAD Q I
Sbjct: 14 EVKTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTI 73
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+++V+Y +D+ E+ E P V AA L + I + A +I+AGWD GGQV
Sbjct: 74 AEMVNYQLDVHSI----EVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQV 129
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y + +G+L+RQ AVGGSGS+Y+ G+VD E+R M K++C F+ LSLAM+RD +SG
Sbjct: 130 Y-VTLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSG 188
Query: 193 GLINIGVLENGKPMEKLVFTQE 214
G+ + ++ EK + E
Sbjct: 189 GVAYLVTIDEKGAEEKCILGNE 210
>sp|A7KE01|PB6LA_SALSA Proteasome subunit beta type-6-A like protein OS=Salmo salar
GN=psmb6l-a PE=3 SV=1
Length = 217
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 131/219 (59%), Gaps = 17/219 (7%)
Query: 1 MEPNLPDISAGTEVTCGTTTIACEYENGVMMGADTRTTLG-TYVCNREAEKLTKISDNIY 59
ME +L D S V+ GTT +A + GV++G+D+R ++G +YV ++ KL ++ D I+
Sbjct: 1 MERHLMD-SQIKGVSTGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIF 59
Query: 60 CCRSGTAADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAI 119
CC +G+ AD QA++ + I ++ +M PPLV AA++ +++ +N+ +A
Sbjct: 60 CCIAGSLADAQAVTKAAKFQI----SFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF 115
Query: 120 IIAGWDTVKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKM 179
I AGWD KG QVY + G+L Q +GGSGS+YI GY D +++ +M K+EC+ F K
Sbjct: 116 ITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKN 175
Query: 180 GLSLAMARDYASGGLINIGVLENGKPMEKLVFTQEEVQH 218
L+LAM RD SGG+ ++ +V T+E V+H
Sbjct: 176 ALALAMGRDNVSGGVAHL-----------VVITEEGVEH 203
>sp|A7KII6|PB6LB_SALSA Proteasome subunit beta type-6-B like protein OS=Salmo salar
GN=psmb6l-b PE=3 SV=1
Length = 217
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 124/206 (60%), Gaps = 16/206 (7%)
Query: 14 VTCGTTTIACEYENGVMMGADTRTTLG-TYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
V+ GTT +A + GV++G+D+R ++G +YV ++ KL ++ D I+CC +G+ AD QA+
Sbjct: 13 VSTGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAV 72
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+ + I ++ +M PPLV AA++ +++ +N+ +A I AGWD KG QV
Sbjct: 73 TKAAKFQI----SFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQV 128
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y + G+L Q +GGSGS+YI GY D +++ +M K+EC+ F L+LAM RD SG
Sbjct: 129 YTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSG 188
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQH 218
G+ ++ +V T+E V+H
Sbjct: 189 GVAHL-----------VVITEEGVEH 203
>sp|O35524|PSB9_MUSSI Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + GT V NR +KL+ + I+C SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +I+AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ +GGSGSSYI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFN 221
G+I + V ++ V +E+ F++
Sbjct: 191 GVIYL-VTITAAGVDHRVILGDELPRFYD 218
>sp|P28076|PSB9_MOUSE Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + GT V NR +KL+ + I+C SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +I+AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ +GGSGSSYI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFN 221
G+I + V ++ V +E+ F++
Sbjct: 191 GVIYL-VTITAAGVDHRVILGDELPKFYD 218
>sp|P28077|PSB9_RAT Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1
SV=2
Length = 219
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + G V NR +KL+ + IYC SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +++AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ A+GGSGS+YI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFN 221
G+I + V ++ V +E+ F++
Sbjct: 191 GVIYL-VTITADGVDHRVILGDELPKFYD 218
>sp|O35522|PSB9_MUSMB Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9
PE=1 SV=1
Length = 219
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 6/209 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + GT V NR +KL+ + I+C SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +I+AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ + GSGSSYI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFN 221
G+I + V ++ V +E+ F++
Sbjct: 191 GVIYL-VTITAAGVDHRVILGDELPKFYD 218
>sp|O35521|PSB9_MUSDU Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1
Length = 219
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 6/208 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + G V NR +KL+ + I+C SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +I+AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ +GGSGSSYI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFF 220
G+I + V ++ V +E+ F+
Sbjct: 191 GVIYL-VTITAAGVDHRVILGDELPKFY 217
>sp|O35523|PSB9_MUSPL Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1
Length = 219
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 6/209 (2%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
EV GTT +A E++ GV++G+D+R + G V NR +KL+ + I+C SG+AAD QAI
Sbjct: 16 EVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAI 75
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
+D+ +Y ++L E+ EPPLV AAN+ + I A +I+AGWD +GGQV
Sbjct: 76 ADMAAYQLELHGL----ELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQV 131
Query: 133 YALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASG 192
Y G+L RQ +GGSGSSYI GYVD ++ M +EC F ++LAM RD +SG
Sbjct: 132 YGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSG 190
Query: 193 GLINIGVLENGKPMEKLVFTQEEVQHFFN 221
G+I + V ++ V +E+ F++
Sbjct: 191 GVIYL-VTITVAGVDHRVILGDELPKFYD 218
>sp|Q8SR11|PSB1_ENCCU Probable proteasome subunit beta type-1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=PRE3 PE=1 SV=1
Length = 203
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 9/186 (4%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT IA +Y++GV++GAD+RT++G YV +R +KLT+I+D I+ CRSG++ADTQ IS +
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 77 SYHIDLDVAYGYREMNEP-PLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYAL 135
++ + Y ++ + P V RAA L KI N S A +I+AG+D +V+ +
Sbjct: 70 RMYLSM-----YSQLEDSIPQVQRAAALASKIIYENP-SLLAGLIVAGYDDKP--RVFNI 121
Query: 136 PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLI 195
G LT ++ A+GGSGS++I GY D WR+ M +E I F++ +S A+ RD ASGG I
Sbjct: 122 SLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASGGCI 181
Query: 196 NIGVLE 201
+ +
Sbjct: 182 RMSAIS 187
>sp|P25043|PSB2_YEAST Proteasome subunit beta type-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PUP1 PE=1 SV=1
Length = 261
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 5/195 (2%)
Query: 15 TCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISD 74
+ GTT + ++ NGV++ ADTR+T G V ++ KL +IS I+C +GTAADT+A++
Sbjct: 27 STGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQ 86
Query: 75 LVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYA 134
L+ +I+L Y RE P V A + ++ +G A +I+AG D G +++
Sbjct: 87 LIGSNIELHSLYTSRE----PRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPT-GSHLFS 141
Query: 135 LPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGL 194
+ A G GSGS + ++ W+ ++ K+E I + + D SG
Sbjct: 142 IHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSN 201
Query: 195 INIGVLENGKPMEKL 209
+++ V+E GK E L
Sbjct: 202 VDVCVMEIGKDAEYL 216
>sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2
PE=1 SV=2
Length = 274
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 8 ISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAA 67
+ A + + GTT + +++GV++GADTR T G V ++ EK+ ++ NIYCC +GTAA
Sbjct: 30 LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89
Query: 68 DTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTV 127
DT+A++D+VS + L R+ V A L +K S +G AA+++ G D +
Sbjct: 90 DTEAVTDMVSSQLRLHRYQTGRDSR----VVTALTLLKKHLFSYQGHVSAALVLGGVD-I 144
Query: 128 KGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMAR 187
G ++ + G A GSGS + + +++ + + E I + + +
Sbjct: 145 TGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFN 204
Query: 188 DYASGGLINIGVLENG 203
D SG ++I V+ G
Sbjct: 205 DLGSGSNVDICVITKG 220
>sp|O23710|PSB7A_ARATH Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1
PE=1 SV=2
Length = 273
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 8 ISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAA 67
+ A + + GTT + +++GV++GADTR T G V ++ EK+ ++ NIYCC +GTAA
Sbjct: 30 LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89
Query: 68 DTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTV 127
DT+A++D+VS + L R+ V A L +K S +G AA+++ G D +
Sbjct: 90 DTEAVTDMVSSQLRLHRYQTGRDSR----VITALTLLKKHLFSYQGHVSAALVLGGVD-I 144
Query: 128 KGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMAR 187
G ++ + G A GSGS + + +++ + + E I + + +
Sbjct: 145 TGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFN 204
Query: 188 DYASGGLINIGVLENG 203
D SG ++I V+ G
Sbjct: 205 DLGSGSNVDICVITKG 220
>sp|Q99436|PSB7_HUMAN Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1
Length = 277
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT Y++G+++GADTR T G V ++ K+ IS NIYCC +GTAADT + L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S +++L R P V A + +++ +G AA+++ G D V G +Y++
Sbjct: 103 SSNLELHSLSTGRL----PRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIY 157
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + ++R +M+++E + + ++ + D SG I+
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNID 217
Query: 197 IGVLENGK 204
+ V+ K
Sbjct: 218 LCVISKNK 225
>sp|P70195|PSB7_MOUSE Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1
Length = 277
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT Y++G+++GADTR T G V ++ K+ IS NIYCC +GTAADT + L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S +++L R P V A + +++ +G AA+++ G D V G +Y++
Sbjct: 103 SSNLELHSLTTGRL----PRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIY 157
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + ++R +M+++E + ++ + D SG I+
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNID 217
Query: 197 IGVLENGK 204
+ V+ K
Sbjct: 218 LCVISKSK 225
>sp|Q9JHW0|PSB7_RAT Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1
SV=1
Length = 277
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT Y++G+++GADTR T G V ++ K+ IS NIYCC +GTAADT + L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S +++L R P V A + +++ +G AA+++ G D V G +Y++
Sbjct: 103 SSNLELHSLTTGRL----PRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIY 157
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + ++R +M+++E + ++ + D SG I+
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNID 217
Query: 197 IGVLENGK 204
+ V+ K
Sbjct: 218 LCVISKSK 225
>sp|Q2TBP0|PSB7_BOVIN Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1
Length = 277
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT Y++G+++GADTR T G V ++ K+ IS NIYCC +GTAADT + L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S +++L R P V A + +++ +G AA+++ G D V G +Y++
Sbjct: 103 SSNLELHSLSTGRL----PRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIY 157
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + ++R +M+++E + ++ + D SG I+
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNID 217
Query: 197 IGVLENGK 204
+ V+ K
Sbjct: 218 LCVISKSK 225
>sp|A1XQU1|PSB7_PIG Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2
Length = 277
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT Y++G+++GADTR T G V ++ K+ IS NIYCC +GTAADT + L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S +++L R P V A + +++ +G AA+++ G D V G +Y++
Sbjct: 103 SSNLELHSLSTGRL----PRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIY 157
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + ++R M+++E + ++ + D SG I+
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNID 217
Query: 197 IGVLENGK 204
+ V+ K
Sbjct: 218 LCVISKSK 225
>sp|Q09841|PSB2_SCHPO Probable proteasome subunit beta type-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup1 PE=2 SV=1
Length = 267
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 15 TCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISD 74
+ GTT + ++ +++GADTR T G + ++ +KL IS NI+C +GTAADT+ ++
Sbjct: 33 STGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTS 92
Query: 75 LVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYA 134
++S +I+L Y R +P +V L Q +FR +G A +++ G+D KG ++
Sbjct: 93 MISSNIELHSLYTNR---KPRVVTALTMLKQHLFRY-QGHIGAYLVLGGYD-CKGPHLFT 147
Query: 135 LPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGL 194
+ A G + GSGS + ++ +++ ++++ E ++ +K + + D SG
Sbjct: 148 IAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSN 207
Query: 195 INIGVLENGK 204
++ V++ K
Sbjct: 208 CDLVVIDEEK 217
>sp|A6UT20|PSB_META3 Proteasome subunit beta OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=psmB PE=3 SV=1
Length = 217
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
E GTTT+ +G+++ D R T+G + ++EA+KL KI D + +G+ D Q++
Sbjct: 10 EYMKGTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSL 69
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQV 132
++S +L Y R N P A L + S F +II G+DT+ G ++
Sbjct: 70 VRIISAEANL---YKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKL 126
Query: 133 YALPASGVLTRQNC-AVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYAS 191
++L A G L + GSGS G +++E++ +M + L+ AM RD S
Sbjct: 127 FSLDAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTAAMKRDAFS 186
Query: 192 GGLINIGVLE-NGKPMEKLVFTQEEVQHFFN 221
G I++ V++ NG +++ EE++ N
Sbjct: 187 GNGISLAVIDKNGVK----IYSDEEIEELSN 213
>sp|A0RXV1|PSB2_CENSY Proteasome subunit beta 2 OS=Cenarchaeum symbiosum (strain A)
GN=psmB2 PE=3 SV=2
Length = 210
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
++ GTTT+ + +GV++ AD R + G ++ N K+ +I D+ +G AD Q I
Sbjct: 8 KILHGTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNI 67
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRA-ANLFQKIFRSNEG-SFKAAIIIAGWDTVKGG 130
D++ YH L +R + P+ ++ A L IF N G F A I++ G+D V G
Sbjct: 68 VDVLRYHASL-----HRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAV-GP 121
Query: 131 QVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYA 190
+Y + G + ++ GSGS G +++E+RA++ E + A+ R+
Sbjct: 122 ALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIG 181
Query: 191 SGGLINIGVLENGKPMEKLVFTQEE 215
+G IN+ V+ NG E L Q++
Sbjct: 182 TGDGINVAVI-NGNGFELLTREQKK 205
>sp|Q58634|PSB_METJA Proteasome subunit beta OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmB PE=1 SV=1
Length = 224
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
+V GTTT+ ++ V++ D R +LG V ++EA+KL KI D I +G+ D QAI
Sbjct: 2 DVMKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAI 61
Query: 73 SDLVSYHIDLDVAYGYRE-MNEPPLVYRAANLFQKIFRSNEG-SFKAAIIIAGWDTVKGG 130
L+ L Y R N PPL A L I S+ F III G+D ++G
Sbjct: 62 VRLLIAEAKL---YKMRTGRNIPPLA--CATLLSNILHSSRMFPFLTQIIIGGYDLLEGA 116
Query: 131 QVYAL-PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDY 189
++++L P G+ + GSGS G ++ + +M +E I L AM RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDT 176
Query: 190 ASGGLINIGVL-ENGKPMEKLVFTQEEVQHFFN 221
SG I++ V+ ++G +F EE++ +
Sbjct: 177 FSGNGISLAVITKDGVK----IFEDEEIEKILD 205
>sp|D3S8M7|PSB_METSF Proteasome subunit beta OS=Methanocaldococcus sp. (strain FS406-22)
GN=psmB PE=3 SV=1
Length = 224
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
+V GTTT+ ++ V++ D R +LG V ++EA+KL KI D I +G+ D QAI
Sbjct: 2 DVMKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAI 61
Query: 73 SDLVSYHIDLDVAYGYRE-MNEPPLVYRAANLFQKIFRSNEG-SFKAAIIIAGWDTVKGG 130
L++ L Y R N PPL A L I S+ F III G+D ++G
Sbjct: 62 VRLLTAEAKL---YKMRTGRNIPPLA--CATLLSNILHSSRVFPFLTQIIIGGYDLLEGA 116
Query: 131 QVYAL-PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDY 189
++++L P G+ + GSGS G ++ + M +E I L AM RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDT 176
Query: 190 ASGGLINIGVL--ENGKPMEKLVFTQEEVQHFFN 221
SG I++ V+ E K +F EE++ +
Sbjct: 177 FSGNGISLAVITKEGVK-----IFEDEEIEKILD 205
>sp|C7P6N4|PSB_METFA Proteasome subunit beta OS=Methanocaldococcus fervens (strain DSM
4213 / JCM 157852 / AG86) GN=psmB PE=3 SV=1
Length = 224
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
+V GTTT+ ++ V++ D R ++G V ++EA+KL KI D I +G+ D QAI
Sbjct: 2 DVMKGTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAI 61
Query: 73 SDLVSYHIDLDVAYGYRE-MNEPPLVYRAANLFQKIFRSNE-GSFKAAIIIAGWDTVKGG 130
L++ L Y R N PL A L I SN F +II G+D ++G
Sbjct: 62 VRLLTAEAKL---YKMRTGKNISPLA--CATLLSNILHSNRYFPFLTQLIIGGYDLLEGA 116
Query: 131 QVYAL-PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDY 189
++++L P G+ + GSGS G ++ + +M +E I L AM RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDT 176
Query: 190 ASGGLINIGVL--ENGKPMEKLVFTQEEVQHFFNH 222
SG I++ V+ E K +F EE++ N
Sbjct: 177 YSGNGISLAVITKEGVK-----IFEDEEIEKILNE 206
>sp|A9A2U7|PSB2_NITMS Proteasome subunit beta 2 OS=Nitrosopumilus maritimus (strain SCM1)
GN=psmB2 PE=3 SV=1
Length = 210
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
++ GTTT+ + ++GV++ AD R + G ++ N K+ KI D+ +G AD Q I
Sbjct: 8 KILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNI 67
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEG-SFKAAIIIAGWDTVKGGQ 131
D++ YH +L E + P ++ A L IF N G F A I++ G+D +G
Sbjct: 68 VDILRYHSNLHRV----EKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-EGPA 122
Query: 132 VYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYAS 191
++ + G + ++ GSGS G +++E+R ++ +E + A+ R+ +
Sbjct: 123 LFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGT 182
Query: 192 GGLINIGVLE 201
G INI +++
Sbjct: 183 GDGINIAIMD 192
>sp|Q4KM35|PSB10_RAT Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2
SV=1
Length = 273
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 1 MEPNLPDISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYC 60
+E LP + GTT + +GV++GADTR T + V ++ EK+ I+ IYC
Sbjct: 23 LEHVLPGLRVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYC 82
Query: 61 CRSGTAADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAII 120
C +G AADT+ + + + ++L RE P V + ++ +G A++I
Sbjct: 83 CGAGVAADTEMTTRMAASKMELHALSTGRE----PRVATVTRILRQTLFRYQGHVGASLI 138
Query: 121 IAGWDTVKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMG 180
+ G D + G Q+Y++ G +R GSG + ++ ++ NM + + +
Sbjct: 139 VGGVD-LNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEA 197
Query: 181 LSLAMARDYASGGLINIGVLENG 203
++ + D SGG ++ V+ G
Sbjct: 198 ITAGILGDLGSGGSVDACVITAG 220
>sp|A8AB58|PSB2_IGNH4 Proteasome subunit beta 2 OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=psmB2 PE=3 SV=1
Length = 212
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTTT+ E V++ AD R T G ++ ++ EK+ KISD + +G AD Q ++D++
Sbjct: 13 GTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADVL 72
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEG-SFKAAIIIAGWDTVKGGQVYAL 135
+ + + M+ V AA + S + +++ G+DT ++Y+L
Sbjct: 73 RMEVKNYELFHKKRMS----VKAAATFLSNVLHSARFYPYIVQLLVGGFDT--APRLYSL 126
Query: 136 PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLI 195
G + + V GSGS +G ++ E+ NM +E ++ + A RD ASG I
Sbjct: 127 DWFGTVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGI 186
Query: 196 NIGVLE-NGKPME 207
++ V++ NG M
Sbjct: 187 DVAVIDRNGITMR 199
>sp|O35955|PSB10_MOUSE Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1
Length = 273
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 1 MEPNLPDISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYC 60
+E LP + GTT + +GV++GADTR T + V ++ EK+ I+ IYC
Sbjct: 23 LEHVLPGLRVPHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYC 82
Query: 61 CRSGTAADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAII 120
C +G AADT+ + + + ++L RE P V + ++ +G A+++
Sbjct: 83 CGAGVAADTEMTTRMAASKMELHALSTGRE----PRVATVTRILRQTLFRYQGHVGASLV 138
Query: 121 IAGWDTVKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMG 180
+ G D + G Q+Y + G +R GSG + ++ ++ NM + + +
Sbjct: 139 VGGVD-LNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEA 197
Query: 181 LSLAMARDYASGGLINIGVLENG--KPMEKLVFTQEEVQ 217
++ + D SGG ++ V+ G K L E VQ
Sbjct: 198 ITAGILSDLGSGGNVDACVITAGGAKLQRALSTPTEPVQ 236
>sp|P40306|PSB10_HUMAN Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1
Length = 273
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 1 MEPNLPDISAGTEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYC 60
+E LP + GTT +++GV++GADTR T + V ++ EK+ I+ IYC
Sbjct: 23 LERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYC 82
Query: 61 CRSGTAADTQAISDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAII 120
C +G AAD + + +V+ ++L RE P V + ++ +G A++I
Sbjct: 83 CGAGVAADAEMTTRMVASKMELHALSTGRE----PRVATVTRILRQTLFRYQGHVGASLI 138
Query: 121 IAGWDTVKGGQVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMG 180
+ G D + G Q+Y + G +R GSG L ++ ++ NM + +
Sbjct: 139 VGGVD-LTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEA 197
Query: 181 LSLAMARDYASGGLINIGVL 200
++ + D SGG ++ V+
Sbjct: 198 VTAGILGDLGSGGNVDACVI 217
>sp|Q54QR2|PSB7_DICDI Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7
PE=3 SV=1
Length = 266
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTT + Y+ GV++GADTR T G V ++ EK+ I+DNIYCC +GTAADT++ + L+
Sbjct: 34 GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALI 93
Query: 77 SYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYALP 136
S + L ++ V A + +++ +G AA+I+ G D + G ++ +
Sbjct: 94 SSKLKLHKLSTGKQTR----VITALTMLKQMLFKYQGHISAALILGGID-INGPSLHTIY 148
Query: 137 ASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLIN 196
G + GSGS + + +++ +M K+E I + +S + D SG ++
Sbjct: 149 PHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVD 208
Query: 197 IGVLE 201
+ V+E
Sbjct: 209 VTVIE 213
>sp|B1L6S7|PSB1_KORCO Proteasome subunit beta 1 OS=Korarchaeum cryptofilum (strain OPF8)
GN=psmB1 PE=3 SV=1
Length = 206
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 17 GTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLV 76
GTTT+ +++NGV++ +D R T GT+V ++ A K KI+D SG AD Q + + V
Sbjct: 5 GTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDYAVATISGLVADGQYLVNNV 64
Query: 77 SYHIDLDVAYGYREMNEPPLVYRA-ANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVYAL 135
DL Y E PL R A + + R F A +I G +G ++ +
Sbjct: 65 RTIADL-----YSLDTERPLSVRGIARILAFLLRRYRPYFLLAQLIVGGVDREGAHLFNV 119
Query: 136 PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLI 195
G LT ++ GSGS + ++ + +M ++ + + ++ A++RD A+G I
Sbjct: 120 DPFGTLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAATGDGI 179
Query: 196 NIGVLEN 202
++ V+++
Sbjct: 180 DVVVIDD 186
>sp|B5IEE5|PSB_ACIB4 Proteasome subunit beta OS=Aciduliprofundum boonei (strain DSM
19572 / T469) GN=psmB PE=3 SV=1
Length = 210
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 26 ENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLVSYHIDLDVA 85
++GV+MG + R ++ T++ ++ A+KL K+ NI +G D Q + + I+L
Sbjct: 16 KDGVVMGTEHRASMETFIAHKTAQKLYKLDYNIGMTTAGLVGDLQVLVRYMRAEINL--- 72
Query: 86 YGYREMNEPPLVYRAANLFQKIFRSNEGSF---KAAIIIAGWDTVKGGQVYALPASGVLT 142
Y R P V AA L I NE F +++ G+D+ KG V+A+ A+G
Sbjct: 73 YRIRRKMYMP-VGAAATLLSNIL--NERKFFPYYVGLLVGGFDS-KGYHVFAIDAAGGAI 128
Query: 143 RQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLINIGVLEN 202
A GSGS ++ G ++ W+ ++ E I+ + G++ AM RD ASG I++ +
Sbjct: 129 EDKYASVGSGSLFVYGVLEDRWKDDLSLDEGINLVIRGINAAMRRDAASGDGISVATITK 188
Query: 203 GKPMEKLVFTQEEVQ 217
+ +L +QEEV+
Sbjct: 189 DEGFVEL--SQEEVE 201
>sp|D3RX66|PSB_FERPA Proteasome subunit beta OS=Ferroglobus placidus (strain DSM 10642 /
AEDII12DO) GN=psmB PE=3 SV=1
Length = 210
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 13 EVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAI 72
+V GTTT+ ++GV++ + R T+G ++ +R A+K+ KI+D I +G+ D Q +
Sbjct: 5 KVFKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFL 64
Query: 73 SDLVSYHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNE-GSFKAAIIIAGWDTVKGGQ 131
+ L+ +L Y R+ E P V A L + S + ++I G D G +
Sbjct: 65 ARLIKVETNL---YTIRK-EEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKT-GAK 119
Query: 132 VYAL-PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYA 190
+Y++ P G + + GSGS G ++ +R ++ E ++ + AM RD A
Sbjct: 120 IYSIDPIGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSA 179
Query: 191 SGGLINIGVLENGKPMEKLVFTQEEVQHFFNH 222
SG I++ + + +E T EE++
Sbjct: 180 SGDGIDVVKITEKEYVE---LTPEEIEAILEK 208
>sp|Q2NI68|PSB_METST Proteasome subunit beta OS=Methanosphaera stadtmanae (strain DSM
3091) GN=psmB PE=3 SV=1
Length = 205
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 12 TEVTCGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQA 71
TE GTTT+ +GV++ +TR T+G+ V N+ A+KL +I D I +GT + Q+
Sbjct: 4 TENMEGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQS 63
Query: 72 ISDLVSYHIDLDVAYGYREMNEPPLVYRA-ANLFQKIFRSNEGSFKAAIIIAGWDTVKGG 130
+ D++ I L Y+ NE + A A L I +S + I+AG D G
Sbjct: 64 LMDILKAEISL-----YKLRNEKDMSIDALAVLTSNILKSR--PYYVQTILAGVDK-DGA 115
Query: 131 QVYALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYA 190
++Y L SG GSGS Y G ++ + ++ +E ++ AM RD
Sbjct: 116 KLYTLDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVY 175
Query: 191 SGGLINIGVL-ENGKPMEKLVFTQEEVQHF 219
SG +GV+ ++G ++T+EE+
Sbjct: 176 SGNNYRLGVITKDGMK----IYTKEEIAQI 201
>sp|A4WH05|PSB1_PYRAR Proteasome subunit beta 1 OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=psmB1 PE=3 SV=1
Length = 202
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 18 TTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLVS 77
TTT+ ++GV++ D R T G Y+ +++ EKL KI D++ SG AD Q I ++
Sbjct: 2 TTTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLT 61
Query: 78 YHIDLDVAYGYREMNEPPLVYRAANLFQK--IFRSNEGSFKAAIIIAGWDTVKGGQVYAL 135
A Y+ P+ RA + +F S + II G D +G +Y +
Sbjct: 62 VR-----AREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMV 116
Query: 136 PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLI 195
G +T++ GSGS Y G ++ +R ++ +E +D + A+ D SG I
Sbjct: 117 DWLGTVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGI 176
Query: 196 NIGVLENGKPMEKLVFTQEEV 216
++ + +++ TQ+++
Sbjct: 177 DVVTITKRDGFKRIFTTQQKL 197
>sp|Q8ZYF2|PSB1_PYRAE Proteasome subunit beta 1 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=psmB1 PE=3 SV=1
Length = 202
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 18 TTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDLVS 77
TTT+ ++GV++ D R T G Y+ ++ EK+ KI D++ SG AD Q++ ++
Sbjct: 2 TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 78 YHIDLDVAYGYR-EMNEPPLVYRAANLFQKI-FRSNEGSFKAAIIIAGWDTVKGGQVYAL 135
A+ Y+ E P + N I F S + II G D +G +Y +
Sbjct: 62 LR-----AHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMV 116
Query: 136 PASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARDYASGGLI 195
G +T++ GSGS Y G ++ +R +M ++ +D + A+ D SG I
Sbjct: 117 DWLGTVTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDPGSGEGI 176
Query: 196 NIGVLENGKPMEKLVFTQEEV 216
++ V+ + +++ TQ+++
Sbjct: 177 DVVVITRKEGFKRVFTTQQKL 197
>sp|Q975D1|PSB2_SULTO Proteasome subunit beta 2 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=psmB2 PE=3 SV=1
Length = 207
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 16 CGTTTIACEYENGVMMGADTRTTLGTYVCNREAEKLTKISDNIYCCRSGTAADTQAISDL 75
GTTT+ + ++GV++ AD R + G YV ++ K+ ++ NI +G+ AD Q I DL
Sbjct: 12 TGTTTVGIKVKDGVVLAADRRASAGMYVAHKYVRKVLYVAPNIGITTAGSVADLQFIYDL 71
Query: 76 VS--YHIDLDVAYGYREMNEPPLVYRAANLFQKIFRSNEGSFKAAIIIAGWDTVKGGQVY 133
+ YH +L G R + L AN+ S + I+I G D + ++Y
Sbjct: 72 LKNIYHYNLIT--GMRPITIKALATYLANMLS---FSKYLPYIVQILIGGVD--EQPRLY 124
Query: 134 ALPASGVLTRQNCAVGGSGSSYILGYVDKEWRANMKKQECIDFIKMGLSLAMARD-YASG 192
L G +T ++ GSGS +G ++ E+R +M E D + + ++ RD Y
Sbjct: 125 NLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDPYTGT 184
Query: 193 GLINIGVLENGKPMEKLVFTQEEV 216
G+I + +NG EK + Q ++
Sbjct: 185 GVIVSKITKNGHE-EKEYYPQRKI 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,338,211
Number of Sequences: 539616
Number of extensions: 3379454
Number of successful extensions: 8133
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 7711
Number of HSP's gapped (non-prelim): 377
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)