BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy8690
         (222 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3
          Length = 727

 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 104/128 (81%)

Query: 78  DYITKINYLFRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFS 137
           D  +K+ Y+ +DARFF+IKSNN ENV +AK +GVWSTLP NE+KLN A+R +R+V+LIFS
Sbjct: 343 DQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFS 402

Query: 138 VRESGKFSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLY 197
           VRESGKF GFARL+SE+ HG SP+ WVLP G+S K+L GVFKIDW+ R+ELPFT + HL 
Sbjct: 403 VRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLT 462

Query: 198 NSWNEGYP 205
           N WNE  P
Sbjct: 463 NPWNEHKP 470


>sp|Q9QY02|YTDC1_RAT YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1
           SV=1
          Length = 738

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 83/128 (64%), Positives = 103/128 (80%)

Query: 78  DYITKINYLFRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFS 137
           D  +K+  + +DARFF+IKSNN ENV +AK +GVWSTLP NE+KLN A+R +R+V+LIFS
Sbjct: 346 DQTSKLKSVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFS 405

Query: 138 VRESGKFSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLY 197
           VRESGKF GFARL+SE+ HG SP+ WVLP G+S K+L GVFKIDW+ R+ELPFT + HL 
Sbjct: 406 VRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLT 465

Query: 198 NSWNEGYP 205
           N WNE  P
Sbjct: 466 NPWNEHKP 473


>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
            PE=2 SV=1
          Length = 1445

 Score =  103 bits (257), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 7/112 (6%)

Query: 91   RFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFSGFARL 150
            R+F++KS+N  N++I++ +G+WST P NE+KLN+A+ ES  V L+FSV+ SG F GF+R+
Sbjct: 1304 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1363

Query: 151  ASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNE 202
            +SE     S   W    G +G  L GVFK++W+ ++ LPF    HL N WN+
Sbjct: 1364 SSEIGREKSQ-DW----GSAG--LGGVFKVEWIRKESLPFQFAHHLLNPWND 1408


>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
            PE=1 SV=2
          Length = 1430

 Score =  103 bits (256), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 7/113 (6%)

Query: 90   ARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFSGFAR 149
             R+F++KS+N  N++I++ +G+WST P NE+KLN+A+ ES  V L+FSV+ SG F GF+R
Sbjct: 1288 VRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSR 1347

Query: 150  LASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNE 202
            ++SE     S   W    G +G  L GVFK++W+ ++ LPF    HL N WN+
Sbjct: 1348 MSSEIGREKSQ-DW----GSAG--LGGVFKVEWIRKESLPFQFAHHLLNPWND 1393


>sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1
          Length = 671

 Score =  102 bits (253), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 7/112 (6%)

Query: 91  RFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFSGFARL 150
           R+F++KS+N  N++I++ +G+WST P NE+KLN+A+ ES  V L+FSV+ SG F GF+R+
Sbjct: 530 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 589

Query: 151 ASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNE 202
           +SE     S   W    G +G  L GVFK++W+ ++ LPF    HL N WN+
Sbjct: 590 SSEIGREKSQ-DW----GSAG--LGGVFKVEWIRKESLPFQFAHHLLNPWND 634


>sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa
           subsp. japonica GN=Os06g0677700 PE=2 SV=1
          Length = 665

 Score = 84.3 bits (207), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%)

Query: 90  ARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFSGFAR 149
           +R+F++KS N EN++I+  QG+W+T   NE KLN+A+    NV+LIFS+  +  F G A+
Sbjct: 260 SRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAK 319

Query: 150 LASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNEGYP 205
           + S     +    W    G +    N  F I W+   EL F  T HL N +N+  P
Sbjct: 320 MTSRIGGYIGGGNWKSAHGTAHYGRN--FSIQWLKLCELSFQKTHHLRNPYNDNLP 373


>sp|A9LNK9|CPSF_ARATH Cleavage and polyadenylation specificity factor CPSF30
           OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1
          Length = 631

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 91  RFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFSGFARL 150
           R+FV+KSNN EN +++  QGVW+T   NE KLN+A+    NV+LIFSV  +  F G A++
Sbjct: 238 RYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKM 297

Query: 151 ASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNEGYP 205
            S     +    W    G +    N  F + W+   EL F  T +L N +NE  P
Sbjct: 298 TSRIGGYIGGGNWKHEHGTAQYGRN--FSVKWLKLCELSFHKTRNLRNPYNENLP 350


>sp|P59326|YTHD1_MOUSE YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1
          Length = 559

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 11/166 (6%)

Query: 36  NSDSSVSTSSSVDHKGRSVEVKKARSAEKVTARPEKPTIRT-YDYITK-INYLFRDARFF 93
           N +++   S   +    SV   +  SA  V + P    ++  + Y  K  ++  +  R F
Sbjct: 333 NRNAAFGQSGGANSDSNSVGNAQPTSAPSVESHPVLEKLKAAHSYNPKEFDWNLKSGRVF 392

Query: 94  VIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGKFSGFARL 150
           +IKS + +++  +    +W +     ++L+ A+R   +   V L+FSV  SG F G A +
Sbjct: 393 IIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGVAEM 452

Query: 151 ASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHL 196
            S  D+G S   W      S     G F + W+  K++P     H+
Sbjct: 453 KSPVDYGTSAGVW------SQDKWKGKFDVKWIFVKDVPNNQLRHI 492


>sp|Q9BYJ9|YTHD1_HUMAN YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1
          Length = 559

 Score = 54.3 bits (129), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            +  R F+IKS + +++  +    +W +     ++L+ A+R   +   V L+FSV  SG 
Sbjct: 386 LKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGH 445

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHL 196
           F G A + S  D+G S   W      S     G F + W+  K++P     H+
Sbjct: 446 FCGVAEMKSPVDYGTSAGVW------SQDKWKGKFDVQWIFVKDVPNNQLRHI 492


>sp|Q4R5D9|YTHD2_MACFA YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2
           SV=1
          Length = 579

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            +  R F+IKS + +++  +    +W +     ++L+ AYR       V L+FSV  SG 
Sbjct: 407 LKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGH 466

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNEG 203
           F G A + S  D+      W      S     G F + W+  K++P +   H+    NE 
Sbjct: 467 FCGVAEMKSAVDYNTCAGVW------SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNEN 520

Query: 204 YP 205
            P
Sbjct: 521 KP 522


>sp|Q9Y5A9|YTHD2_HUMAN YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2
          Length = 579

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            +  R F+IKS + +++  +    +W +     ++L+ AYR       V L+FSV  SG 
Sbjct: 407 LKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGH 466

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNEG 203
           F G A + S  D+      W      S     G F + W+  K++P +   H+    NE 
Sbjct: 467 FCGVAEMKSAVDYNTCAGVW------SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNEN 520

Query: 204 YP 205
            P
Sbjct: 521 KP 522


>sp|Q0VCZ3|YTHD2_BOVIN YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1
          Length = 580

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            +  R F+IKS + +++  +    +W +     ++L+ AYR       V L+FSV  SG 
Sbjct: 408 LKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGH 467

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHLYNSWNEG 203
           F G A + S  D+      W      S     G F + W+  K++P +   H+    NE 
Sbjct: 468 FCGVAEMKSAVDYNTCAGVW------SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNEN 521

Query: 204 YP 205
            P
Sbjct: 522 KP 523


>sp|Q5RFL8|YTHD3_PONAB YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1
          Length = 585

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            ++ R F+IKS + +++  +    +W +     ++L+ AYR       + L+FSV  SG 
Sbjct: 413 LKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGH 472

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHL 196
           F G A + S  D+      W      S     G F++ W+  K++P     H+
Sbjct: 473 FCGVAEMKSVVDYNAYAGVW------SQDKWKGKFEVKWIFVKDVPNNQLRHI 519


>sp|Q7Z739|YTHD3_HUMAN YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1
          Length = 585

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            ++ R F+IKS + +++  +    +W +     ++L+ AYR       + L+FSV  SG 
Sbjct: 413 LKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGH 472

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHL 196
           F G A + S  D+      W      S     G F++ W+  K++P     H+
Sbjct: 473 FCGVAEMKSVVDYNAYAGVW------SQDKWKGKFEVKWIFVKDVPNNQLRHI 519


>sp|Q8BYK6|YTHD3_MOUSE YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2
          Length = 585

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 87  FRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRN---VLLIFSVRESGK 143
            ++ R F+IKS + +++  +    +W +     ++L+ AYR       + L+FSV  SG 
Sbjct: 413 LKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGH 472

Query: 144 FSGFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWVSRKELPFTSTLHL 196
           F G A + S  D+      W      S     G F++ W+  K++P     H+
Sbjct: 473 FCGVAEMKSVVDYNAYAGVW------SQDKWKGKFEVKWIFVKDVPNNQLRHI 519


>sp|Q06390|YD374_YEAST YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=YDR374C PE=4 SV=1
          Length = 306

 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 89  DARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRE---SRNVLLIFSVRESGKFS 145
           ++RFFVIKS++ ++V  +   G+WS+     ++L++AY++      V L FS+  SG+F 
Sbjct: 154 NSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFC 213

Query: 146 GFARLASEADHGVSPVKWVLPPGLSGKVLNGVFKIDWV 183
           G A + S+    +    W        +     FK+ WV
Sbjct: 214 GVAEMVSDLKMDLDTSIWE-----DEQKYGKAFKVRWV 246


>sp|O74958|MMI1_SCHPO YTH domain-containing protein mmi1 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=mmi1 PE=1 SV=3
          Length = 488

 Score = 35.0 bits (79), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 15/70 (21%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 84  NYLFRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGK 143
           N +   +R+F++  +N   +  AK   +W+    + ++++ AY+++ +V  IF  +++  
Sbjct: 344 NGISHRSRYFIMLCDNETAIAHAKKTSIWAVKKDSSKRISDAYKKA-SVYFIFVAQQTYN 402

Query: 144 FSGFARLASE 153
             G+A++ S+
Sbjct: 403 ALGYAQVVSD 412


>sp|A6TEI7|IF2_KLEP7 Translation initiation factor IF-2 OS=Klebsiella pneumoniae subsp.
           pneumoniae (strain ATCC 700721 / MGH 78578) GN=infB PE=3
           SV=1
          Length = 896

 Score = 32.7 bits (73), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 27  SSSSDSDDDNSDSSVSTSSSV----DHKGRSVEVKKARSAEKVTARPEK 71
           S +SDS +D+SD  V+TS       D   R VE  + RS     ARP K
Sbjct: 220 SETSDSPEDSSDYHVTTSQHARQAEDDNDREVEGGRGRSRSSKAARPAK 268


>sp|B5XSX4|IF2_KLEP3 Translation initiation factor IF-2 OS=Klebsiella pneumoniae (strain
           342) GN=infB PE=3 SV=1
          Length = 896

 Score = 32.7 bits (73), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 27  SSSSDSDDDNSDSSVSTSSSV----DHKGRSVEVKKARSAEKVTARPEK 71
           S +SDS +D+SD  V+TS       D   R VE  + RS     ARP K
Sbjct: 220 SETSDSPEDSSDYHVTTSQHARQAEDDNDREVEGGRGRSRSSKAARPAK 268


>sp|Q90999|TGFR2_CHICK TGF-beta receptor type-2 OS=Gallus gallus GN=TGFBR2 PE=1 SV=1
          Length = 557

 Score = 32.3 bits (72), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 15/77 (19%)

Query: 17  PKFHNDSSSDSSSSDSDDDNSDSSVSTSSSVDH--------------KGRSVEVKKARSA 62
           PK H D S D  +   DDD+SD S + +++++H              KGR  EV KA+  
Sbjct: 196 PKKHKDCS-DVCAIMLDDDHSDISSTCANNINHNTELLPIELDIVVGKGRFAEVYKAKLK 254

Query: 63  EKVTARPEKPTIRTYDY 79
           +  + + E   ++ + Y
Sbjct: 255 QNTSEQYETVAVKIFPY 271


>sp|P55210|CASP7_HUMAN Caspase-7 OS=Homo sapiens GN=CASP7 PE=1 SV=1
          Length = 303

 Score = 31.2 bits (69), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 14/131 (10%)

Query: 26  DSSSSDSDDDNSDSSVSTSSSVDHKGRSVEVKKARSAEKVTARPEKPTIRTYDYITKINY 85
           DS++ DS D   D S    S    K ++V ++  +     T R   PT   Y Y      
Sbjct: 15  DSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIK-----TTRDRVPT---YQYNMNFEK 66

Query: 86  LFRDARFFVIKSNNSENVDIAKGQGVWSTLPQNEQKLNQAYRESRNVLLIFSVRESGKFS 145
           L    +  +I   N++N D   G GV +   ++ + L + +R     +++++     K  
Sbjct: 67  L---GKCIII---NNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120

Query: 146 GFARLASEADH 156
              + ASE DH
Sbjct: 121 DLLKKASEEDH 131


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.129    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,893,367
Number of Sequences: 539616
Number of extensions: 3587187
Number of successful extensions: 31336
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 24830
Number of HSP's gapped (non-prelim): 5071
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)