BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8693
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 346 bits (887), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/176 (91%), Positives = 168/176 (95%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVNIPLRDGMDD++YESIFVPIISKVMETFQP+AVVLQCGADSLTGD
Sbjct: 208 DLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGD 267
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GHGKCVEFVK+YNLPFLMVGGGGYTIRNVSRCWTYETSVAL EIANELP
Sbjct: 268 RLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELP 327
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 328 YNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIP 383
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/68 (92%), Positives = 68/68 (100%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVNIPLRDGMDD++YESIFVPIISKVMETFQP+AVVLQCGADSLTGDRL
Sbjct: 210 RDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRL 269
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 270 GCFNLTVK 277
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 324 bits (830), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 149/176 (84%), Positives = 163/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P+ISKVMETFQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIP 385
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 66/68 (97%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P+ISKVMETFQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 323 bits (828), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P+++KVME FQPSAVVLQCGADSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMTKVMEMFQPSAVVLQCGADSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEF+K +NLP LM+GGGGYTIRNV+RCWTYET+VAL SEI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTIRNVARCWTYETAVALDSEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P+++KVME FQPSAVVLQCGADSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMTKVMEMFQPSAVVLQCGADSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 298 bits (763), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/174 (83%), Positives = 160/174 (91%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN LRDG+DDESYE+IF P++SKVME FQPSAVVLQCGADSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGADSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEF+K +NLP LM+GGGGYTIRNV+RCWTYET+VAL SEI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDSEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQV 197
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQA 383
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 64/68 (94%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN LRDG+DDESYE+IF P++SKVME FQPSAVVLQCGADSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGADSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 298 bits (762), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/189 (79%), Positives = 165/189 (87%), Gaps = 4/189 (2%)
Query: 11 IVNDRDQTWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSA 70
+VN+ T DL +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSA
Sbjct: 202 MVNNFPGTGDL----RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSA 257
Query: 71 VVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYET 130
VVLQCGADSL+GDRLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET
Sbjct: 258 VVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYET 317
Query: 131 SVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHA 190
+VAL EI NELPYNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHA
Sbjct: 318 AVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHA 377
Query: 191 PGVQVQVSP 199
PGVQ+Q P
Sbjct: 378 PGVQMQAIP 386
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 298 bits (762), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 296 bits (757), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 158/176 (89%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE K +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 295 bits (754), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/176 (80%), Positives = 161/176 (91%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESY+ IF PI+ KVME +QPSA+ LQCGADSL+GD
Sbjct: 209 DLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGD 268
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEF+K+YNLP L++GGGGYTIRNV+RCWTYETS ALG EIANELP
Sbjct: 269 RLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELP 328
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYL+KIKTRL+EN+RM+PHAPGVQ+Q P
Sbjct: 329 YNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIP 384
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 62/68 (91%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESY+ IF PI+ KVME +QPSA+ LQCGADSL+GDRL
Sbjct: 211 RDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRL 270
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 271 GCFNLTLK 278
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 148/176 (84%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGA KGKYY++N PL+DG+DDESY+SIF PII VM+ ++P AVV+QCGADSLTGD
Sbjct: 205 DVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT+RGH +C+EF+K +N+P +++GGGGYTI+NV+RCWTYETS+ + SE+ +ELP
Sbjct: 265 RLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELP 324
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDY EY+GP+++LHI+P+NM NQNT +YLEK+K +L ENLR L HAP P
Sbjct: 325 YNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIP 380
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 61/68 (89%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGA KGKYY++N PL+DG+DDESY+SIF PII VM+ ++P AVV+QCGADSLTGDRL
Sbjct: 207 KDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRL 266
Query: 271 GCFNLTVR 278
GCFNLT+R
Sbjct: 267 GCFNLTLR 274
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 257 bits (656), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 145/180 (80%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+D+GA KGKYYA+N+PL DGMDDES+ S+F P+I KVME +QP AVVLQCGADSL+GDRL
Sbjct: 224 RDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRL 283
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+V+GH C+ F++ YN+P +++GGGGYTIRNV+RCW YET+VA+G E N+LPYN
Sbjct: 284 GCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN 343
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPIL 205
+YFEYFGPD+ LH+ PS M N NTP+ +E+I+ L E L L HAP VQ Q +P + +L
Sbjct: 344 EYFEYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVL 403
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+D+GA KGKYYA+N+PL DGMDDES+ S+F P+I KVME +QP AVVLQCGADSL+GDRL
Sbjct: 224 RDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRL 283
Query: 271 GCFNLTVR---DC 280
GCFNL+V+ DC
Sbjct: 284 GCFNLSVKGHADC 296
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 140/176 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GD
Sbjct: 214 DLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLG FNLT++GHG+C F + YN+P +MVGGGGYT RNV+RCWTYETS+A+ E+ NELP
Sbjct: 274 RLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELP 333
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGP+++LHI SN AN+N+ + L K++T + NL L P VQ++ P
Sbjct: 334 YNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIP 389
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GDRL
Sbjct: 216 KDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRL 275
Query: 271 GCFNLTVR 278
G FNLT++
Sbjct: 276 GPFNLTLK 283
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 148/186 (79%), Gaps = 3/186 (1%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YYA+N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--S 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLSYD 388
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 59/67 (88%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YYA+N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 58/67 (86%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 58/67 (86%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 135/174 (77%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+D G G GK YAVN+PLRDG+DDESYES+F P+IS +M+ F+P AV+LQCG DSL GDRL
Sbjct: 209 KDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRL 268
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+++GH CV+FVK +NLP + VGGGGYT+RNV+R WTYET + G E+ LPYN
Sbjct: 269 GCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDENLPYN 328
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
DY +Y+GPD+KL++ +NM N NT +YL+ I + + ENLR L AP VQ+ +P
Sbjct: 329 DYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTP 382
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 59/71 (83%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+D G G GK YAVN+PLRDG+DDESYES+F P+IS +M+ F+P AV+LQCG DSL GDRL
Sbjct: 209 KDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRL 268
Query: 271 GCFNLTVRDCS 281
GCFNL+++ S
Sbjct: 269 GCFNLSMKGHS 279
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 238 bits (606), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 58/67 (86%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 237 bits (605), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVEFVK + +P L++GGGGYT+RNV+RCWT+ETS+ L I++ELP
Sbjct: 265 RLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRNVARCWTFETSLLLEESISDELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y++YFEYF PDF LH S + NQN+ +YLE+I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIHDVP 381
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 237 bits (605), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 148/186 (79%), Gaps = 3/186 (1%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ++ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 GLLTYD 388
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 58/67 (86%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CV++VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP 381
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVEFVK + +P L++GGGGYT+RNV+RCWT+ETS+ + I++ELP
Sbjct: 265 RLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y++YFEYF PDF LH S + NQN+ +YLE+I+ +FENL+ML HAP VQ++ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVP 381
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CV++VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FE+L+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTVFESLKMLNHAPSVQIHDVP 381
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLG 267
Query: 272 CFNLTVR 278
CFNL++R
Sbjct: 268 CFNLSIR 274
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 134/174 (77%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG G GK YAVN+PLRDG+DD +Y S+F P+I K+ME +QPSAVVLQCG DSL+GDRL
Sbjct: 222 RDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRL 281
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL++ GH CV +VK + +P ++VGGGGYT+RNV+R W +ET + + +LPYN
Sbjct: 282 GCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYN 341
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EY+GPD+KL + PSNM N NTPEYL+K+ T +F NL +AP VQ+ +P
Sbjct: 342 EYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTP 395
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG G GK YAVN+PLRDG+DD +Y S+F P+I K+ME +QPSAVVLQCG DSL+GDRL
Sbjct: 222 RDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRL 281
Query: 271 GCFNLTVR 278
GCFNL++
Sbjct: 282 GCFNLSME 289
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 230 bits (587), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 141/174 (81%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
QDIG G GKYY++N+PL DG+DDESY +F PI+ KVME F+P AVVLQCGADSL+GDRL
Sbjct: 220 QDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRL 279
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+++GH +CV+F++ +N+P L++GGGGYTIRNV+RCW YET VALG E+ +++P +
Sbjct: 280 GCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEH 339
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ L NL L HAP V Q P
Sbjct: 340 EYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERP 393
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
QDIG G GKYY++N+PL DG+DDESY +F PI+ KVME F+P AVVLQCGADSL+GDRL
Sbjct: 220 QDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRL 279
Query: 271 GCFNLTVR 278
GCFNL+++
Sbjct: 280 GCFNLSIK 287
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 132/176 (75%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++IG +GK+YA+N+PL+DG+DD S+ +F IISKV+E +QP A+VLQCGADSL D
Sbjct: 207 DVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARD 266
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++ GH +CV+FVK++NLP L+ GGGGYT NV+RCWT ET + L +E+ NE+P
Sbjct: 267 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
NDY +YF PDF L I ++ N NT Y+ IK ++ ENLR + HAP VQ+Q P
Sbjct: 327 ENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 382
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
++IG +GK+YA+N+PL+DG+DD S+ +F IISKV+E +QP A+VLQCGADSL DRL
Sbjct: 209 KEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRL 268
Query: 271 GCFNLTV 277
GCFNL++
Sbjct: 269 GCFNLSI 275
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 5/186 (2%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +IGA GK Y+VN+PL DG+DD++Y +IF P+I VM+ ++PS +VLQCGADSL D
Sbjct: 214 DIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH +CV FVK +N+P L++GGGGYT+RNV+RCWTYETSV + +E+ NELP
Sbjct: 274 RLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNELP 333
Query: 144 YNDYFEYFGPDFKLHIS----PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ-VS 198
YNDY +++ PDF+L P N NT YLE ++ ++ ENLR+L AP VQ+Q V
Sbjct: 334 YNDYIQFYSPDFQLIPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVP 393
Query: 199 PIIGPI 204
P I PI
Sbjct: 394 PDIMPI 399
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+IGA GK Y+VN+PL DG+DD++Y +IF P+I VM+ ++PS +VLQCGADSL DRLG
Sbjct: 217 EIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLG 276
Query: 272 CFNLTVR 278
CFNLT++
Sbjct: 277 CFNLTIK 283
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 224 bits (570), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 141/173 (81%), Gaps = 4/173 (2%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIG KGKYY++N+PL DG+DDESY+S+F PI+ KVME F+P AVVLQCGADSL+GD
Sbjct: 223 DIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGD 282
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL+++GH +CV +++ +N+P L++GGGGYTIRNV+RCW YET VALG E +++P
Sbjct: 283 RLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMP 342
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ 196
N+Y+EYFGPD+ LH++PSNM N+NT + L+ I+++L + L HAP V Q
Sbjct: 343 VNEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSKLSK----LRHAPSVHFQ 391
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 61/68 (89%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG KGKYY++N+PL DG+DDESY+S+F PI+ KVME F+P AVVLQCGADSL+GDRL
Sbjct: 225 RDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRL 284
Query: 271 GCFNLTVR 278
GCFNL+++
Sbjct: 285 GCFNLSIK 292
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 128/176 (72%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D G GKG+YY++N PL+DG+DD S +F+P+I + ME ++P +VLQCGADSL GD
Sbjct: 213 DISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
G FNL+++GHG C+++V+ +N+P +++GGGGYT+ NV+RCW YET++A+G ++ N+LP
Sbjct: 273 PFGTFNLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
NDY +YF PD+KLHI P+N N NT + ++ L L ++ HAP V Q +P
Sbjct: 333 GNDYMKYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTP 388
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G GKG+YY++N PL+DG+DD S +F+P+I + ME ++P +VLQCGADSL GD G
Sbjct: 216 DYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFG 275
Query: 272 CFNLTVR---DC 280
FNL+++ DC
Sbjct: 276 TFNLSIKGHGDC 287
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 121/173 (69%), Gaps = 2/173 (1%)
Query: 29 GAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCF 88
G GKY+A+N+PL DG+ DE Y S+F II + TFQPSA+VLQCGADSL DRLG F
Sbjct: 233 GVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVF 292
Query: 89 NLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND-Y 147
NL++ HG+CV F + +N+P L+VGGGGYT+RNV+R W YETS+ + +I +ELP Y
Sbjct: 293 NLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRETLY 352
Query: 148 FEYFGPDFKLHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+E+F PD+ LH + + N+NTP+ LE ++ R E LR L AP VQ+Q P
Sbjct: 353 YEFFAPDYTLHPRLTTKIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIP 405
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 210 YQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDR 269
+ + G GKY+A+N+PL DG+ DE Y S+F II + TFQPSA+VLQCGADSL DR
Sbjct: 229 FDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDR 288
Query: 270 LGCFNLTVR 278
LG FNL++
Sbjct: 289 LGVFNLSIH 297
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +IG KGK++A+N+PL DG+DD+SY ++F I+ ++ TF+P+ +V QCGADSL D
Sbjct: 229 DLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHD 288
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYET----SVALGSEIA 139
RLGCFNL ++ HG+CV+FVK + LP L+VGGGGYT RNVSR WTYET V L +I
Sbjct: 289 RLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIP 348
Query: 140 NELPYNDYFEYFGPDFKLHISPSNM-ANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVS 198
++P+ D FGPD+ L+ ++ N+N+ + LE I+ R EN+R L AP V++
Sbjct: 349 EDIPFRD---SFGPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAE 405
Query: 199 PIIGPILWYDPYQDIGA 215
I P QDI A
Sbjct: 406 CI--------PTQDISA 414
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+IG KGK++A+N+PL DG+DD+SY ++F I+ ++ TF+P+ +V QCGADSL DRLG
Sbjct: 232 EIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLG 291
Query: 272 CFNLTVR 278
CFNL ++
Sbjct: 292 CFNLNIK 298
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 112/164 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
+++F +GPD+ L I+PS ++N P +++I + NL+ +
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 112/164 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
+++F +GPD+ L I+PS ++N P +++I + NL+ +
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLK 374
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 115/164 (70%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D DIG GKG+YY+VN+PL+DG+ DE Y I ++ +V TF P AVVLQ GAD++ GD
Sbjct: 205 DVSDIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T +G GKC+++V ++ LP L++GGGGY + N +RCWTY T++ +G +++E+P
Sbjct: 265 PMCSFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIP 324
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
+++F +GPD+ L ++PS ++N + +++I + +L+ +
Sbjct: 325 DHEFFTEYGPDYVLEVTPSCRPDRNDSQKVQEILQSIKGHLKQV 368
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
DIG GKG+YY+VN+PL+DG+ DE Y I ++ +V TF P AVVLQ GAD++ GD +
Sbjct: 208 DIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMC 267
Query: 272 CFNLT 276
FN+T
Sbjct: 268 SFNMT 272
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 113/162 (69%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D DIG GKG+YY++N+PL+DG+ D+ Y I ++ +V TF P AVVLQ GAD++ GD
Sbjct: 161 DVSDIGLGKGRYYSINVPLQDGIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGD 220
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ LP L++GGGGY + N +RCWTY T++ +G +++E+P
Sbjct: 221 PMCSFNMTPEGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIP 280
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N + +++I + NL+
Sbjct: 281 DHEFFTEYGPDYVLEITPSCRPDRNDTQKVQEILQSIKGNLK 322
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
DIG GKG+YY++N+PL+DG+ D+ Y I ++ +V TF P AVVLQ GAD++ GD +
Sbjct: 164 DIGLGKGRYYSINVPLQDGIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMC 223
Query: 272 CFNLT 276
FN+T
Sbjct: 224 SFNMT 228
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 110/164 (67%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++D + DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
+++F +GPD+ L I+PS ++N P +++I + NL+ +
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
D+G GKG+YY+VN+P++D + DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 215 SDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPM 274
Query: 271 GCFNLT 276
FN+T
Sbjct: 275 CSFNMT 280
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
D G G GKY+A+N+PL + DE Y +F +IS V E F P A+VLQCG+DSL DRLG
Sbjct: 234 DKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLG 293
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
F L+ H + V++VK P +++GGGGYT+RNV+RCW ET V LG + +E+P
Sbjct: 294 QFALSFNAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTS 353
Query: 147 -YFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ 196
Y YF P M + N+ YL I+ LRM+ AP VQ+Q
Sbjct: 354 LYSHYFTPRLLRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQ 404
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G G GKY+A+N+PL + DE Y +F +IS V E F P A+VLQCG+DSL DRLG
Sbjct: 234 DKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLG 293
Query: 272 CFNLT 276
F L+
Sbjct: 294 QFALS 298
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 106/162 (65%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D G GKG++YAVN+P DG+ D+ Y F ++ +V F P AVV+Q GAD++ GD
Sbjct: 214 DVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G KC+ ++ + LP L++GGGGY + N +RCWTY T LG +++E+P
Sbjct: 274 PMCSFNMTPVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIP 333
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L ISPS ++N ++LE++ + + NL+
Sbjct: 334 DHEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLK 375
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G GKG++YAVN+P DG+ D+ Y F ++ +V F P AVV+Q GAD++ GD +
Sbjct: 217 DTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMC 276
Query: 272 CFNLT 276
FN+T
Sbjct: 277 SFNMT 281
>sp|Q9LXN8|HDA17_ARATH Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1
Length = 158
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%)
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
F++ GH +CV+FVK++NLP L+ GGGGYT NV+RCWT ET + L +E+ NE+ ND
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 147 YFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y +YF PDF L I ++ N NT Y+ IK ++ ENLR + HAP VQ+Q P
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 114
>sp|Q9M1N8|HDA10_ARATH Putative histone deacetylase 10 OS=Arabidopsis thaliana GN=HDA10
PE=3 SV=1
Length = 142
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 16/113 (14%)
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
F++ GH +C GGYT NV+RCWT ET + L +E+ NE+P ND
Sbjct: 2 AFSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPEND 45
Query: 147 YFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y +YF PDF L I ++ N NT Y+ IK ++ ENLR + HAP VQ+Q P
Sbjct: 46 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 98
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHG 96
VNIPL+ G DD E I I++ ++E +P A++++CG D L GDR + LT+RG
Sbjct: 292 VVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLS 351
Query: 97 K-CVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYET 130
+ + +K Y ++GGGGY +SR +TY T
Sbjct: 352 RIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 222 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281
VNIPL+ G DD E I I++ ++E +P A++++CG D L GDR + LT+R S
Sbjct: 292 VVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLS 351
>sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2
Length = 552
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 27 DIGAGKGKYYAVNIPLR-DGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
++G+ G+ Y VN+P G+ D+ Y F ++ + F P V++ G D+ GD L
Sbjct: 352 EVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPL 411
Query: 86 GCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPY 144
GC ++T G+ + + + L++ GGY +R++S T V LG NELP
Sbjct: 412 GCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPI 471
Query: 145 NDYFEYFG-------PDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
G + +L PS + + + L +++ RL EN +
Sbjct: 472 ATTPSVAGLQTVLDVLNIQLEFWPSLAISYS--KLLSELEARLIENKK 517
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 212 DIGAGKGKYYAVNIPLR-DGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
++G+ G+ Y VN+P G+ D+ Y F ++ + F P V++ G D+ GD L
Sbjct: 352 EVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPL 411
Query: 271 GCFNLT 276
GC ++T
Sbjct: 412 GCCDVT 417
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
Q+ G+GKG Y+ NIPL +D+S+ + S+V F+P ++ Q GAD+ D L
Sbjct: 206 QEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGADAHYYDPL 265
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPF-----LMVGGGGYTI-RNVSRCWTYETSVALGSEIA 139
+ T+ + + + + VGGGGY I R V R W G +
Sbjct: 266 THLSATINIYEEIPRLAHTLAHQYCGGKWIAVGGGGYDIWRVVPRAWARIWLEMKGIDPG 325
Query: 140 NELP 143
+E+P
Sbjct: 326 HEIP 329
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
Q+ G+GKG Y+ NIPL +D+S+ + S+V F+P ++ Q GAD+ D L
Sbjct: 206 QEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGADAHYYDPL 265
Query: 271 GCFNLTV 277
+ T+
Sbjct: 266 THLSATI 272
>sp|O30107|Y130_ARCFU Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0130 PE=3 SV=1
Length = 359
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
++ G GKG+ Y VNIPL G DE Y + II V+ F+P + + G D+ D +
Sbjct: 197 EECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPI 256
Query: 86 GCFNLTVRGHG----KCVEFVKRY-NLPFLMVGGGGYTI 119
LT RG+ + V +++ + + V GGY++
Sbjct: 257 TSLALTARGYAEMMRRAVAMAEKHCDGRLVAVLEGGYSV 295
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
++ G GKG+ Y VNIPL G DE Y + II V+ F+P + + G D+ D +
Sbjct: 197 EECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPI 256
Query: 271 GCFNLTVR 278
LT R
Sbjct: 257 TSLALTAR 264
>sp|Q9Z2V5|HDAC6_MOUSE Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3
Length = 1149
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 28 IGAGKGKYYAVNIPL-RDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
IG G+G+ Y +N+P + GM D Y + F+ I+ V FQP V++ G D+L GD G
Sbjct: 294 IGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKG 353
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGG-------GGYTIRNVSRCWTYETSVALG 135
T G F +L + GG GGY +R +++ + LG
Sbjct: 354 EMAATPAG------FAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLG 403
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 203 PILWYDPYQDIGAGKGKYYAVNIPL-RDGMDDESYESIFVPIISKVMETFQPSAVVLQCG 261
P L + IG G+G+ Y +N+P + GM D Y + F+ I+ V FQP V++ G
Sbjct: 284 PHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAAG 343
Query: 262 ADSLTGDRLG 271
D+L GD G
Sbjct: 344 FDALHGDPKG 353
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 27 DIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+G G + VN+P M D Y + + ++ + F P V++ G D+ GD L
Sbjct: 689 QVGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPL 748
Query: 86 GCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYETSVALG 135
G +T G+ + +++ GGY + ++S T LG
Sbjct: 749 GGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLG 799
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG G + VN+PL +D S+ F + V+++F+P ++ G D D L
Sbjct: 214 EDIGYG----HTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPL 269
Query: 86 GCFNLTVRGHGKCVEFVKRY-----NLPFLMVGGGGYTI-RNVSRCWTY 128
N T+ + FVK N +M GGGGY I R V R W++
Sbjct: 270 THLNCTLHSLYEIPYFVKYLADTYTNGKIIMFGGGGYNIWRVVPRAWSH 318
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG G + VN+PL +D S+ F + V+++F+P ++ G D D L
Sbjct: 214 EDIGYG----HTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPL 269
Query: 271 GCFNLTVR 278
N T+
Sbjct: 270 THLNCTLH 277
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,685,834
Number of Sequences: 539616
Number of extensions: 5231577
Number of successful extensions: 9777
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 9564
Number of HSP's gapped (non-prelim): 190
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)