Query psy8693
Match_columns 282
No_of_seqs 350 out of 2812
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:49:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a69_A Histone deacetylase 3,; 100.0 1.4E-55 4.9E-60 414.4 19.0 194 1-194 180-376 (376)
2 3max_A HD2, histone deacetylas 100.0 3.2E-54 1.1E-58 403.5 19.4 187 1-187 180-367 (367)
3 3ew8_A HD8, histone deacetylas 100.0 8.7E-54 3E-58 402.4 20.0 190 1-190 188-379 (388)
4 1c3p_A Protein (HDLP (histone 100.0 3.1E-41 1.1E-45 317.7 15.0 144 1-144 178-324 (375)
5 1zz1_A Histone deacetylase-lik 100.0 7.5E-41 2.6E-45 314.5 16.2 148 1-149 190-343 (369)
6 2vqm_A HD4, histone deacetylas 100.0 8.4E-39 2.9E-43 304.7 14.6 179 1-194 206-394 (413)
7 2pqp_A HD7A, histone deacetyla 100.0 6.4E-38 2.2E-42 296.5 14.6 139 1-139 235-383 (421)
8 3men_A Acetylpolyamine aminohy 100.0 7.8E-38 2.7E-42 291.7 14.8 134 1-135 223-359 (362)
9 3q9b_A Acetylpolyamine amidohy 100.0 6.7E-38 2.3E-42 290.5 13.3 133 1-134 205-340 (341)
10 3ew8_A HD8, histone deacetylas 99.9 1.5E-25 5.1E-30 210.7 7.5 111 153-281 175-285 (388)
11 4a69_A Histone deacetylase 3,; 99.9 3E-25 1E-29 208.5 5.0 111 153-281 167-277 (376)
12 1c3p_A Protein (HDLP (histone 99.9 6.8E-25 2.3E-29 206.4 6.5 111 153-281 165-276 (375)
13 1zz1_A Histone deacetylase-lik 99.9 4.5E-25 1.5E-29 207.3 4.8 109 153-281 177-286 (369)
14 3max_A HD2, histone deacetylas 99.9 8.4E-25 2.9E-29 204.6 4.9 110 153-281 167-276 (367)
15 3q9b_A Acetylpolyamine amidohy 99.9 1.1E-23 3.7E-28 195.3 5.6 109 153-281 192-302 (341)
16 3men_A Acetylpolyamine aminohy 99.9 1.3E-23 4.4E-28 196.0 5.0 109 153-281 210-320 (362)
17 2pqp_A HD7A, histone deacetyla 99.9 1.5E-23 5.1E-28 198.4 4.6 112 153-281 222-339 (421)
18 2vqm_A HD4, histone deacetylas 99.9 1.1E-22 3.7E-27 193.7 5.1 112 153-281 193-310 (413)
19 4hf7_A Putative acylhydrolase; 88.0 0.43 1.5E-05 39.6 4.1 71 37-112 53-124 (209)
20 4h08_A Putative hydrolase; GDS 84.7 3 0.0001 33.8 7.5 60 35-106 46-109 (200)
21 3hp4_A GDSL-esterase; psychrot 81.7 1.5 5E-05 34.9 4.4 66 37-113 41-110 (185)
22 1ivn_A Thioesterase I; hydrola 78.7 4 0.00014 32.6 6.1 47 60-112 55-105 (190)
23 3mil_A Isoamyl acetate-hydroly 77.6 4.5 0.00015 33.2 6.3 70 36-113 45-120 (240)
24 2vpt_A Lipolytic enzyme; ester 73.7 3.7 0.00013 33.7 4.7 57 48-112 68-126 (215)
25 3p94_A GDSL-like lipase; serin 71.4 3 0.0001 33.4 3.5 69 37-113 49-121 (204)
26 3bzw_A Putative lipase; protei 71.3 7.5 0.00026 33.3 6.2 48 37-87 61-109 (274)
27 2q0q_A ARYL esterase; SGNH hyd 68.7 5.6 0.00019 32.1 4.7 50 60-113 75-138 (216)
28 3d2m_A Putative acetylglutamat 68.6 7.8 0.00027 36.3 6.1 69 41-117 16-85 (456)
29 3dci_A Arylesterase; SGNH_hydr 67.2 8.9 0.0003 31.8 5.7 42 60-105 93-139 (232)
30 3ced_A Methionine import ATP-b 66.7 3.6 0.00012 30.4 2.7 57 56-112 34-95 (98)
31 3dff_A Teicoplanin pseudoaglyc 66.1 7.1 0.00024 34.2 5.0 32 51-82 132-163 (273)
32 1uf3_A Hypothetical protein TT 66.0 22 0.00076 28.7 7.9 58 54-121 20-77 (228)
33 3dfi_A Pseudoaglycone deacetyl 64.6 8.4 0.00029 33.7 5.2 32 52-83 130-161 (270)
34 1es9_A PAF-AH, platelet-activa 64.5 4.3 0.00015 33.7 3.1 65 37-113 67-137 (232)
35 2q8u_A Exonuclease, putative; 63.6 19 0.00064 31.9 7.4 63 49-119 44-108 (336)
36 3dff_A Teicoplanin pseudoaglyc 63.4 8.8 0.0003 33.6 5.1 32 236-267 132-163 (273)
37 3dfi_A Pseudoaglycone deacetyl 63.0 9.5 0.00032 33.3 5.2 33 235-267 128-160 (270)
38 2o14_A Hypothetical protein YX 62.7 6.8 0.00023 35.9 4.4 69 37-112 202-275 (375)
39 3rjt_A Lipolytic protein G-D-S 62.6 1.7 5.9E-05 35.1 0.3 52 61-112 77-136 (216)
40 1yzf_A Lipase/acylhydrolase; s 62.2 9.3 0.00032 29.9 4.7 68 37-113 42-111 (195)
41 2buf_A Acetylglutamate kinase; 60.2 27 0.00093 30.8 7.8 61 50-117 9-69 (300)
42 3av0_A DNA double-strand break 60.1 22 0.00076 32.3 7.4 57 50-114 44-103 (386)
43 1ii7_A MRE11 nuclease; RAD50, 59.6 40 0.0014 29.7 8.9 62 49-119 23-87 (333)
44 3skv_A SSFX3; jelly roll, GDSL 56.1 13 0.00046 34.2 5.2 52 60-113 237-290 (385)
45 1vjg_A Putative lipase from th 55.4 4.3 0.00015 33.2 1.5 72 37-114 59-137 (218)
46 4h08_A Putative hydrolase; GDS 54.1 20 0.00068 28.6 5.4 39 221-263 47-85 (200)
47 2ap9_A NAG kinase, acetylgluta 53.4 17 0.00059 32.0 5.3 62 47-118 5-69 (299)
48 3he2_A Enoyl-COA hydratase ECH 51.4 38 0.0013 29.4 7.1 75 37-115 35-116 (264)
49 1k7c_A Rhamnogalacturonan acet 51.2 34 0.0012 28.4 6.6 38 38-78 36-74 (233)
50 2f6q_A Peroxisomal 3,2-trans-e 51.0 74 0.0025 27.5 9.0 75 37-115 40-130 (280)
51 2bty_A Acetylglutamate kinase; 47.4 32 0.0011 29.9 6.0 59 50-118 4-65 (282)
52 4fva_A 5'-tyrosyl-DNA phosphod 47.4 23 0.00078 28.8 4.8 36 37-76 18-53 (256)
53 1fxw_F Alpha2, platelet-activa 47.0 21 0.00071 29.3 4.5 64 37-112 68-137 (229)
54 2ej5_A Enoyl-COA hydratase sub 46.6 93 0.0032 26.4 8.8 75 37-115 17-103 (257)
55 2q02_A Putative cytoplasmic pr 46.3 65 0.0022 26.8 7.7 22 94-115 86-107 (272)
56 3sll_A Probable enoyl-COA hydr 45.0 89 0.003 27.2 8.6 79 37-115 38-132 (290)
57 3tho_B Exonuclease, putative; 44.5 54 0.0018 29.7 7.3 60 49-118 26-89 (379)
58 4f1h_A Tyrosyl-DNA phosphodies 44.1 28 0.00097 27.6 4.8 17 59-75 26-42 (250)
59 3t1i_A Double-strand break rep 44.0 72 0.0025 29.8 8.2 48 49-104 54-101 (431)
60 2rd5_A Acetylglutamate kinase- 43.8 16 0.00056 32.2 3.5 59 49-117 18-79 (298)
61 2qsw_A Methionine import ATP-b 43.3 12 0.00039 27.5 2.0 54 56-109 37-94 (100)
62 3l3s_A Enoyl-COA hydratase/iso 43.2 52 0.0018 28.2 6.7 78 37-115 21-113 (263)
63 3aek_B Light-independent proto 43.0 67 0.0023 30.7 8.0 56 54-120 72-128 (525)
64 3dc7_A Putative uncharacterize 41.2 18 0.00062 29.6 3.2 48 66-113 81-136 (232)
65 4gz1_A Tyrosyl-DNA phosphodies 40.8 33 0.0011 27.7 4.8 30 45-75 19-48 (256)
66 2qrr_A Methionine import ATP-b 40.1 14 0.00048 27.1 2.1 68 37-111 25-96 (101)
67 3jug_A Beta-mannanase; TIM-bar 40.1 99 0.0034 27.7 8.3 80 33-119 100-186 (345)
68 1y80_A Predicted cobalamin bin 38.8 48 0.0016 27.3 5.5 47 61-118 133-182 (210)
69 3oc7_A Enoyl-COA hydratase; se 38.8 97 0.0033 26.5 7.7 78 37-114 25-116 (267)
70 4fzw_C 1,2-epoxyphenylacetyl-C 38.4 1.5E+02 0.005 25.5 8.9 79 37-115 29-120 (274)
71 3hrx_A Probable enoyl-COA hydr 37.7 74 0.0025 27.0 6.7 76 37-115 14-100 (254)
72 3dhx_A Methionine import ATP-b 37.7 23 0.00078 26.3 3.0 52 57-108 36-91 (106)
73 4fbw_A DNA repair protein RAD3 37.7 1.1E+02 0.0038 28.4 8.3 48 49-104 35-82 (417)
74 2whl_A Beta-mannanase, baman5; 37.4 1.3E+02 0.0045 25.6 8.4 80 33-119 77-163 (294)
75 2v5h_A Acetylglutamate kinase; 36.2 35 0.0012 30.4 4.5 59 49-117 31-92 (321)
76 3r6h_A Enoyl-COA hydratase, EC 35.6 79 0.0027 26.5 6.5 77 37-115 19-104 (233)
77 3qmj_A Enoyl-COA hydratase, EC 35.6 56 0.0019 27.9 5.6 79 37-115 20-108 (256)
78 2jjx_A Uridylate kinase, UMP k 35.5 59 0.002 27.7 5.7 51 67-119 11-64 (255)
79 2wao_A Endoglucanase E; plant 34.6 16 0.00055 32.5 2.0 47 65-113 211-260 (341)
80 3hp4_A GDSL-esterase; psychrot 34.6 44 0.0015 25.9 4.4 35 223-262 42-76 (185)
81 2xdq_A Light-independent proto 34.4 1.9E+02 0.0064 26.7 9.4 69 55-134 85-155 (460)
82 1uan_A Hypothetical protein TT 34.3 44 0.0015 28.1 4.6 14 60-73 88-101 (227)
83 2j5g_A ALR4455 protein; enzyme 34.2 73 0.0025 27.4 6.1 75 37-115 38-126 (263)
84 3pea_A Enoyl-COA hydratase/iso 34.1 1.1E+02 0.0038 26.0 7.3 77 37-115 20-107 (261)
85 1qv9_A F420-dependent methylen 34.0 1.4E+02 0.0047 26.0 7.5 57 46-115 44-100 (283)
86 4ds3_A Phosphoribosylglycinami 33.9 33 0.0011 28.9 3.6 26 237-263 71-96 (209)
87 2xdq_B Light-independent proto 33.9 1E+02 0.0035 29.2 7.6 57 55-121 76-134 (511)
88 3auf_A Glycinamide ribonucleot 33.4 34 0.0012 29.1 3.8 26 238-264 87-112 (229)
89 3da8_A Probable 5'-phosphoribo 33.3 34 0.0012 28.9 3.7 25 237-262 74-98 (215)
90 4hwg_A UDP-N-acetylglucosamine 33.0 1.1E+02 0.0036 27.7 7.3 62 36-117 66-127 (385)
91 2ywr_A Phosphoribosylglycinami 32.6 36 0.0012 28.6 3.8 27 237-264 65-91 (216)
92 1meo_A Phosophoribosylglycinam 32.6 41 0.0014 28.2 4.0 24 239-263 66-89 (209)
93 1szn_A Alpha-galactosidase; (b 32.5 73 0.0025 29.5 6.2 71 44-114 24-98 (417)
94 2ixd_A LMBE-related protein; h 32.4 64 0.0022 27.4 5.4 11 6-16 4-14 (242)
95 3av3_A Phosphoribosylglycinami 32.4 37 0.0013 28.4 3.8 26 238-264 68-93 (212)
96 3p9x_A Phosphoribosylglycinami 32.2 37 0.0013 28.6 3.8 25 238-263 67-91 (211)
97 1jkx_A GART;, phosphoribosylgl 32.0 33 0.0011 28.8 3.4 26 238-264 65-90 (212)
98 2yxb_A Coenzyme B12-dependent 31.3 64 0.0022 25.6 4.9 35 61-106 63-97 (161)
99 4fbk_A DNA repair and telomere 31.2 1.6E+02 0.0055 27.8 8.3 47 50-104 99-145 (472)
100 2i2x_B MTAC, methyltransferase 30.9 62 0.0021 27.7 5.1 37 61-108 168-204 (258)
101 3zwc_A Peroxisomal bifunctiona 30.8 1.9E+02 0.0064 29.0 9.2 73 36-113 34-113 (742)
102 2ppy_A Enoyl-COA hydratase; be 30.6 72 0.0025 27.3 5.5 75 37-115 23-110 (265)
103 1q74_A 1D-MYO-inosityl 2-aceta 30.5 43 0.0015 29.6 4.0 21 53-73 115-135 (303)
104 1nzy_A Dehalogenase, 4-chlorob 30.0 1.5E+02 0.0051 25.3 7.5 74 37-115 17-109 (269)
105 3g64_A Putative enoyl-COA hydr 29.5 1.5E+02 0.005 25.5 7.3 78 37-115 31-122 (279)
106 2j6p_A SB(V)-AS(V) reductase; 29.5 1.2E+02 0.004 23.4 6.1 22 97-118 88-111 (152)
107 3moy_A Probable enoyl-COA hydr 29.1 25 0.00086 30.3 2.2 73 37-114 24-108 (263)
108 4ep4_A Crossover junction endo 29.1 77 0.0026 25.6 5.0 35 42-76 38-72 (166)
109 3d03_A Phosphohydrolase; glyce 29.0 1E+02 0.0035 25.4 6.1 55 51-114 24-79 (274)
110 2ixd_A LMBE-related protein; h 28.8 57 0.002 27.8 4.4 26 241-266 86-111 (242)
111 2xmo_A LMO2642 protein; phosph 28.7 1.4E+02 0.0049 26.9 7.5 52 52-113 78-132 (443)
112 1mio_B Nitrogenase molybdenum 28.7 2.7E+02 0.0092 25.7 9.5 23 54-76 83-105 (458)
113 2q8p_A Iron-regulated surface 28.6 1.4E+02 0.0046 24.8 6.8 53 64-136 57-109 (260)
114 3hgm_A Universal stress protei 28.6 1.6E+02 0.0055 21.4 6.7 19 98-116 102-120 (147)
115 4hf7_A Putative acylhydrolase; 28.5 42 0.0015 27.0 3.4 36 222-262 53-88 (209)
116 1q74_A 1D-MYO-inosityl 2-aceta 28.2 51 0.0017 29.1 4.1 27 239-265 116-144 (303)
117 3fdu_A Putative enoyl-COA hydr 28.0 78 0.0027 27.2 5.2 78 37-115 19-108 (266)
118 3tqr_A Phosphoribosylglycinami 27.8 46 0.0016 28.0 3.6 25 238-263 69-93 (215)
119 1uan_A Hypothetical protein TT 27.8 46 0.0016 28.0 3.6 26 241-266 84-109 (227)
120 1mjh_A Protein (ATP-binding do 27.6 1.9E+02 0.0066 21.6 7.5 13 62-74 115-127 (162)
121 4gew_A 5'-tyrosyl-DNA phosphod 27.5 66 0.0023 28.8 4.8 36 37-76 124-159 (362)
122 1xrs_B D-lysine 5,6-aminomutas 27.2 1E+02 0.0034 26.8 5.8 39 61-107 174-212 (262)
123 4hn9_A Iron complex transport 27.2 1.5E+02 0.0052 25.8 7.2 54 62-136 111-164 (335)
124 3i47_A Enoyl COA hydratase/iso 26.8 69 0.0024 27.6 4.6 79 37-115 18-108 (268)
125 2gwf_A Ubiquitin carboxyl-term 26.6 81 0.0028 24.6 4.7 9 110-118 133-141 (157)
126 2vx2_A Enoyl-COA hydratase dom 26.6 1E+02 0.0035 26.8 5.8 75 37-115 47-135 (287)
127 2yvt_A Hypothetical protein AQ 26.3 94 0.0032 25.6 5.3 25 95-120 78-102 (260)
128 4ep4_A Crossover junction endo 26.3 95 0.0033 25.0 5.1 35 227-261 38-72 (166)
129 3fdx_A Putative filament prote 25.7 1.9E+02 0.0066 20.9 7.0 15 61-75 100-114 (143)
130 2nxf_A Putative dimetal phosph 25.7 1.2E+02 0.0041 25.5 6.0 60 51-114 36-95 (322)
131 1vjg_A Putative lipase from th 25.4 27 0.00091 28.2 1.6 39 223-262 60-98 (218)
132 1uas_A Alpha-galactosidase; TI 25.0 1.1E+02 0.0037 27.5 5.8 72 44-115 21-96 (362)
133 4fva_A 5'-tyrosyl-DNA phosphod 25.0 88 0.003 25.1 4.8 30 230-260 23-52 (256)
134 3kws_A Putative sugar isomeras 24.7 1E+02 0.0035 25.9 5.4 30 50-80 101-130 (287)
135 3dzc_A UDP-N-acetylglucosamine 24.6 2.3E+02 0.0078 25.4 8.0 49 52-117 97-145 (396)
136 2pbp_A Enoyl-COA hydratase sub 24.5 1.5E+02 0.005 25.1 6.3 74 37-115 19-104 (258)
137 2dum_A Hypothetical protein PH 24.1 2.3E+02 0.008 21.3 7.3 22 97-118 108-129 (170)
138 1uiy_A Enoyl-COA hydratase; ly 23.9 65 0.0022 27.3 3.9 75 38-115 14-103 (253)
139 4f1h_A Tyrosyl-DNA phosphodies 23.8 98 0.0033 24.3 4.8 18 242-259 24-41 (250)
140 3tva_A Xylose isomerase domain 23.6 1.2E+02 0.004 25.5 5.6 30 49-79 98-127 (290)
141 3pdi_B Nitrogenase MOFE cofact 23.5 1.6E+02 0.0055 27.5 6.8 57 54-120 79-141 (458)
142 1yzf_A Lipase/acylhydrolase; s 23.5 62 0.0021 24.9 3.5 37 222-263 42-78 (195)
143 3t3w_A Enoyl-COA hydratase; ss 23.1 3.3E+02 0.011 23.3 8.4 77 37-114 34-125 (279)
144 3rsi_A Putative enoyl-COA hydr 23.0 1.1E+02 0.0037 26.1 5.2 78 37-115 23-111 (265)
145 2vpt_A Lipolytic enzyme; ester 22.7 90 0.0031 25.0 4.4 34 224-262 60-93 (215)
146 2z08_A Universal stress protei 22.7 2.2E+02 0.0075 20.6 7.7 13 62-74 94-106 (137)
147 1ivn_A Thioesterase I; hydrola 22.5 72 0.0025 24.8 3.7 37 222-263 37-73 (190)
148 1szo_A 6-oxocamphor hydrolase; 22.5 2.8E+02 0.0096 23.4 7.8 73 38-115 31-117 (257)
149 1ccw_A Protein (glutamate muta 22.4 1.1E+02 0.0036 23.5 4.5 36 61-107 48-83 (137)
150 3rrx_A EXO-1,3/1,4-beta-glucan 22.2 95 0.0032 31.6 5.2 50 67-117 479-533 (822)
151 3dlo_A Universal stress protei 22.2 2E+02 0.0069 21.7 6.2 19 98-116 109-127 (155)
152 1meo_A Phosophoribosylglycinam 21.9 83 0.0028 26.2 4.0 20 55-74 67-86 (209)
153 3md9_A Hemin-binding periplasm 21.6 2.6E+02 0.009 22.9 7.3 56 63-136 55-110 (255)
154 3ot5_A UDP-N-acetylglucosamine 21.6 2.6E+02 0.0089 25.1 7.8 22 52-74 100-121 (403)
155 4ds3_A Phosphoribosylglycinami 21.6 72 0.0025 26.7 3.6 23 53-76 72-94 (209)
156 3r9q_A Enoyl-COA hydratase/iso 21.5 48 0.0016 28.5 2.5 38 37-74 25-62 (262)
157 4di1_A Enoyl-COA hydratase ECH 21.3 97 0.0033 26.8 4.5 77 37-115 38-124 (277)
158 3da8_A Probable 5'-phosphoribo 21.3 76 0.0026 26.7 3.7 22 53-74 75-96 (215)
159 1ybd_A Uridylate kinase; alpha 21.3 1.2E+02 0.004 25.2 5.0 46 69-116 8-56 (239)
160 3auf_A Glycinamide ribonucleot 21.2 77 0.0026 26.9 3.7 22 54-76 88-109 (229)
161 1wky_A Endo-beta-1,4-mannanase 21.2 2.3E+02 0.008 26.2 7.5 77 36-119 88-171 (464)
162 3t8b_A 1,4-dihydroxy-2-naphtho 21.2 2.7E+02 0.0093 24.7 7.6 37 37-73 71-107 (334)
163 2a7k_A CARB; crotonase, antibi 21.0 2.5E+02 0.0087 23.4 7.1 74 38-115 15-103 (250)
164 3myb_A Enoyl-COA hydratase; ss 21.0 81 0.0028 27.4 4.0 75 37-115 40-128 (286)
165 3av3_A Phosphoribosylglycinami 20.9 75 0.0026 26.5 3.5 23 54-77 69-91 (212)
166 2ywr_A Phosphoribosylglycinami 20.8 79 0.0027 26.4 3.7 24 53-77 66-89 (216)
167 4gz1_A Tyrosyl-DNA phosphodies 20.8 1.2E+02 0.0041 24.2 4.8 24 235-259 24-47 (256)
168 3ek6_A Uridylate kinase; UMPK 20.6 1.6E+02 0.0056 24.8 5.8 48 68-117 9-59 (243)
169 3psh_A Protein HI_1472; substr 20.6 3.8E+02 0.013 22.9 8.4 36 64-116 81-116 (326)
170 3p94_A GDSL-like lipase; serin 20.6 54 0.0018 25.7 2.5 36 222-262 49-84 (204)
171 2bkx_A Glucosamine-6-phosphate 20.3 1.3E+02 0.0044 25.0 5.0 22 61-82 118-140 (242)
172 3p9x_A Phosphoribosylglycinami 20.3 83 0.0029 26.4 3.7 22 54-76 68-89 (211)
173 3l23_A Sugar phosphate isomera 20.2 4E+02 0.014 22.6 9.0 57 59-115 64-130 (303)
174 2dr3_A UPF0273 protein PH0284; 20.1 2.3E+02 0.008 22.6 6.6 53 57-113 118-170 (247)
175 2waa_A Acetyl esterase, xylan 20.1 26 0.00091 31.2 0.5 47 65-112 223-271 (347)
176 3hp0_A Putative polyketide bio 20.1 3.2E+02 0.011 23.2 7.7 76 37-114 21-108 (267)
177 2hsj_A Putative platelet activ 20.1 64 0.0022 25.6 2.9 66 37-113 60-131 (214)
178 2a1f_A Uridylate kinase; PYRH, 20.0 1.8E+02 0.0061 24.4 5.9 48 69-118 9-59 (247)
179 3sc6_A DTDP-4-dehydrorhamnose 20.0 36 0.0012 28.6 1.4 54 60-113 49-105 (287)
No 1
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-55 Score=414.37 Aligned_cols=194 Identities=52% Similarity=1.054 Sum_probs=185.2
Q ss_pred CcccCCCeEEEEcCCCC--CCCCCCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 1 MYLLNTNANFIVNDRDQ--TWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGAD 78 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~--~yPgtG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D 78 (282)
+||+||+|+|+|+|+++ ||||||..+|+|.++|+|+++|||||+|++|++|+++|+++|.|++++|+||+||+|||||
T Consensus 180 iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~D~~yl~~~~~~l~p~~~~f~Pd~IvvsaG~D 259 (376)
T 4a69_A 180 AFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGAD 259 (376)
T ss_dssp HTTTCSSEEEEEEEECSTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCBHHHHHHHHHHHHHHHHHHHCCSEEEEECCGG
T ss_pred HhcCCCCEEEEecccCCCcCCCCCCCccccCCCCCCceeEeeecCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCccc
Confidence 59999999999999986 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCCCccccccCCCcccc
Q psy8693 79 SLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLH 158 (282)
Q Consensus 79 ~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~pdf~l~ 158 (282)
+|.+||||+|+||+++|++|+++++++++|+++|+||||++++++|||++++++++|.++|.++|+++|++.|+|||+||
T Consensus 260 a~~~DpLg~l~Lt~~g~~~~~~~l~~~~~p~v~v~eGGY~~~~var~w~~~~a~l~g~~~~~~~P~~~~~~~~~p~~~l~ 339 (376)
T 4a69_A 260 SLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLH 339 (376)
T ss_dssp GBTTCSSCCCBBCHHHHHHHHHHHHTTCCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCCSBCCCCTTGGGGTTTCBSS
T ss_pred CCCCCcccCeecCHHHHHHHHHHHHHcCCCEEEEECCCCChhHHHHHHHHHHHHhcCCCccCCCCCchHHHHhCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCCchhHHHhhhhhhhhccccCCCCCCcc
Q psy8693 159 IS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQ 194 (282)
Q Consensus 159 v~-~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq 194 (282)
+. +++|+|+|+.+++++++..++++|+++++.|++|
T Consensus 340 ~~~~~~~~~~n~~~~l~~~~~~~~~~l~~~~~~p~~~ 376 (376)
T 4a69_A 340 PDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQ 376 (376)
T ss_dssp CCCCCCSCCCCCHHHHHHHHHHHHHHHHTTC------
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 98 8899999999999999999999999999999986
No 2
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-54 Score=403.49 Aligned_cols=187 Identities=74% Similarity=1.235 Sum_probs=183.6
Q ss_pred CcccCCCeEEEEcCCCC-CCCCCCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 1 MYLLNTNANFIVNDRDQ-TWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADS 79 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~-~yPgtG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~ 79 (282)
+||+||+|+|+|+|+++ ||||||..+|+|.|+|+|+++|||||+|++|++|+++|+++|.|++++|+||+||||||||+
T Consensus 180 iF~~d~~Vl~~S~H~~~~~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~~y~~~~~~~~~~~~~~f~Pd~ivvsaG~D~ 259 (367)
T 3max_A 180 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADS 259 (367)
T ss_dssp HTTTCSSEEEEEEEECSSCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCGGG
T ss_pred HhcCCCCEEEEecccCCCCCCCCCCccccCCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEECCccC
Confidence 59999999999999996 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCCCccccccCCCccccc
Q psy8693 80 LTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 159 (282)
Q Consensus 80 ~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~pdf~l~v 159 (282)
|.+||||+|+||.++|.+|+++++++++|+++|+||||++.+++|||+++|++++|.++|+++|.++||+.|+|||+|++
T Consensus 260 ~~~Dplg~~~lt~~g~~~~~~~~~~~~~p~v~~~eGGY~~~~var~wt~~ta~~~~~~i~~~~p~~~~~~~~~p~~~l~~ 339 (367)
T 3max_A 260 LSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHI 339 (367)
T ss_dssp BTTCSSCCCCBCHHHHHHHHHHHHTTCCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCCSBCCCCTTGGGGTTTCBSSC
T ss_pred cCCCCCCCeeeCHHHHHHHHHHHHhcCCCEEEEeCCCCChhHHHHHHHHHHHHHhhcccccCCCchhhHHhhCCCeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHhhhhhhhhccccC
Q psy8693 160 SPSNMANQNTPEYLEKIKTRLFENLRML 187 (282)
Q Consensus 160 ~~~~~~~~Nt~e~le~i~~vl~esL~~~ 187 (282)
.+++|+|+|+.++++++++.++++|+++
T Consensus 340 ~~~~~~~~n~~~~l~~i~~~~~~~l~~~ 367 (367)
T 3max_A 340 SPSNMTNQNTPEYMEKIKQRLFENLRML 367 (367)
T ss_dssp CCCSCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CcccccCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999863
No 3
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=8.7e-54 Score=402.39 Aligned_cols=190 Identities=36% Similarity=0.753 Sum_probs=185.2
Q ss_pred CcccCCCeEEEEcCCC--CCCCCCCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 1 MYLLNTNANFIVNDRD--QTWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGAD 78 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~--~~yPgtG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D 78 (282)
+||+||+|+|+|+|++ +||||||..+|+|.|+|+|+++|||||+|++|++|+.+|+++|.|++++|+||+||||||||
T Consensus 188 iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~d~~y~~~~~~~l~p~~~~F~PdlIvvsaG~D 267 (388)
T 3ew8_A 188 AFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGAD 267 (388)
T ss_dssp HTTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCST
T ss_pred HhccCCCEEEEecCCCCCCCCCCCCCcccccCCCCcceeeeccCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEECCcc
Confidence 5999999999999997 49999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCCCccccccCCCcccc
Q psy8693 79 SLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLH 158 (282)
Q Consensus 79 ~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~pdf~l~ 158 (282)
+|.+||||+|+||+++|++|+++|+++++|+++++||||++.+++|||++++++++|.++|.++|+++||+.|+|||+|+
T Consensus 268 a~~~DpLg~l~lt~~g~~~~~~~l~~~~~p~l~~~gGGY~~~~var~w~~~~~~l~g~~l~~~lP~~~~~~~~~p~~~l~ 347 (388)
T 3ew8_A 268 TIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLE 347 (388)
T ss_dssp TBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCCCCSBCCCCTTGGGGTTTCBSC
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCCChhHHHHHHHHHHHHHcCCCCCCCCCcccchhhcCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCchhHHHhhhhhhhhccccCCCC
Q psy8693 159 ISPSNMANQNTPEYLEKIKTRLFENLRMLPHA 190 (282)
Q Consensus 159 v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~ 190 (282)
+.+++|+|+|+.+++++++..++++|+++++-
T Consensus 348 ~~~~~~~~~n~~~~l~~i~~~~~~~l~~~~~~ 379 (388)
T 3ew8_A 348 ITPSCRPDRNEPHRIQQILNYIKGNLKHVVIE 379 (388)
T ss_dssp CCCCSCCCCCCHHHHHHHHHHHHHHHTTCCC-
T ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999988643
No 4
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=3.1e-41 Score=317.73 Aligned_cols=144 Identities=26% Similarity=0.391 Sum_probs=139.8
Q ss_pred CcccCCCeEEEEcCCCC--CCCCCCCCCCCC-CCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 1 MYLLNTNANFIVNDRDQ--TWDLLHDKQDIG-AGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 77 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~--~yPgtG~~~~~G-~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~ 77 (282)
+||+||+|+|+|+|+++ ||||||..+|+| .|+|+|+++|||||+|++|++|+++|+++|.|++++|+||+|||||||
T Consensus 178 iF~~dp~Vl~~SiH~~~~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g~~D~~yl~a~~~~l~p~l~~F~PdlIvvsaG~ 257 (375)
T 1c3p_A 178 AFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEIVKEVFEPEVYLLQLGT 257 (375)
T ss_dssp HHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHHHHHHCCCSEEEEECCS
T ss_pred HhccCCCEEEEecccCCCCCCCCCCCccccCCcCCCCceEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEECCc
Confidence 59999999999999986 679999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCC
Q psy8693 78 DSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPY 144 (282)
Q Consensus 78 D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~ 144 (282)
|+|.+||||+|+||+++|++++++++++..|+++|+||||++.++++||++++++++|.++|+.+|+
T Consensus 258 Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~~vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~lp~ 324 (375)
T 1c3p_A 258 DPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEKLNN 324 (375)
T ss_dssp TTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSSCCH
T ss_pred cccCCCCCCCcccCHHHHHHHHHHHHHhccceEEEECCCCChHHHHHHHHHHHHHHcCCCCCccCCH
Confidence 9999999999999999999999999999889999999999999999999999999999999988884
No 5
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=7.5e-41 Score=314.51 Aligned_cols=148 Identities=18% Similarity=0.305 Sum_probs=140.1
Q ss_pred CcccCCCeEEEEcCCCCCCC-CCCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 1 MYLLNTNANFIVNDRDQTWD-LLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADS 79 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~~yP-gtG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~ 79 (282)
+||+||+|+|+|+|+++||| |||..+|+|.|+|+|+++|||||+|++|++|+.+|+++|.|++++|+||+||||||||+
T Consensus 190 iF~~d~~Vl~~SiH~~~~yP~~tG~~~e~G~g~g~g~~vNvPL~~g~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da 269 (369)
T 1zz1_A 190 IWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPLPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDA 269 (369)
T ss_dssp HTTTCTTEEEEEEEETTSSSTTCCCTTCCCCGGGTTCEEEEEECTTCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTT
T ss_pred HhcCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceEEeeecCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 59999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCCCcccc
Q psy8693 80 LTGDRLGCFNLTVRGHGKCVEFVKR-----YNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFE 149 (282)
Q Consensus 80 ~~~Dplg~~~lt~~~~~~~~~~~~~-----~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~ 149 (282)
|.+||||+|+||+++|.+++++|++ +++|+++|+||||+++++++||+.+++.++|.++ ...|..++++
T Consensus 270 ~~~DpLg~l~lt~~g~~~~~~~l~~~a~~~~~g~vv~vleGGY~~~~l~~~~~~~~~~l~g~~~-~~~p~~~~~~ 343 (369)
T 1zz1_A 270 SMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGVRS-LPDPYHEFLA 343 (369)
T ss_dssp BTTCTTCCCBBCHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCTTTHHHHHHHHHHHHHCCCC-CCCTTHHHHH
T ss_pred CCCCCCCCcccCHHHHHHHHHHHHHHHHHhCCCCEEEEECCCCCccHHHHHHHHHHHHHhCCCC-CCCchhHHHh
Confidence 9999999999999999999999886 4799999999999999999999999999999887 5556555554
No 6
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=8.4e-39 Score=304.69 Aligned_cols=179 Identities=21% Similarity=0.326 Sum_probs=151.9
Q ss_pred CcccCCCeEEEEcCCC---CCCCCCCCCCCCCCCCCcccEEeecCCC----CCChhHHHHHHHHHHHHHHHHcCCCEEEE
Q psy8693 1 MYLLNTNANFIVNDRD---QTWDLLHDKQDIGAGKGKYYAVNIPLRD----GMDDESYESIFVPIISKVMETFQPSAVVL 73 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~---~~yPgtG~~~~~G~g~g~g~~~NiPl~~----g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv 73 (282)
+||+||+|+|+|+|++ +||||||..+|+|.++|+|+|+|+||+. +++|++|+.+|+++|.|++++|+||+|||
T Consensus 206 iF~~d~~Vl~~S~H~~~~~~f~pgtG~~~e~G~g~g~g~~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~Pdlivv 285 (413)
T 2vqm_A 206 AFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLV 285 (413)
T ss_dssp HHTTCTTEEEEEEEECGGGCSTTCCCCTTCCCSGGGTTCEEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEE
T ss_pred HHhcCcccccccchhccCCCCCCCCCCHHHcCCCcccccccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999999999986 6999999999999999999999999874 58999999999999999999999999999
Q ss_pred ecCCCCCCC--CcCCCCCCCHHHHHHHHHHHHhc-CCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCcCCCCCCccccc
Q psy8693 74 QCGADSLTG--DRLGCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEY 150 (282)
Q Consensus 74 ~~G~D~~~~--Dplg~~~lt~~~~~~~~~~~~~~-~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~ 150 (282)
|||||+|++ ||||+|+||+++|.+++++|+++ ++|++++||||||++++++||++++++|+|.++++ +|+
T Consensus 286 saG~Da~~~d~D~lg~~~lt~~~~~~~~~~l~~~a~~~~v~vleGGY~~~~l~~~~~~~~~~l~g~~~~~-~p~------ 358 (413)
T 2vqm_A 286 SSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDP-LPE------ 358 (413)
T ss_dssp EECCTTBSSCTTTTCCCCBCHHHHHHHHHHHHTSGGGCEEEEECCCCCHHHHHHHHHHHHHHHTTCCCCC-CCH------
T ss_pred eCChhhcCCCCCCCCCcccCHHHHHHHHHHHHHhcCCCEEEEeCcCCChHHHHHHHHHHHHHHcCCCCCC-CCh------
Confidence 999999998 66999999999999999999996 89999999999999999999999999999987743 221
Q ss_pred cCCCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcc
Q psy8693 151 FGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQ 194 (282)
Q Consensus 151 ~~pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq 194 (282)
..+.. .++.|+.+.++++.+.....++.+...+.++
T Consensus 359 ----~~~~~----~p~~~~~~~~~~v~~~~~~~W~~l~~~~~~~ 394 (413)
T 2vqm_A 359 ----KVLQQ----RPNANAVRSMEKVMEIHSKYWRCLQRTTSTA 394 (413)
T ss_dssp ----HHHHC----CCCHHHHHHHHHHHHHHHTTCGGGTSCCCCT
T ss_pred ----hhhhc----CCChHHHHHHHHHHHHHHHHhhhhhcchhhc
Confidence 11111 2345666777777665555554444445544
No 7
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=6.4e-38 Score=296.52 Aligned_cols=139 Identities=18% Similarity=0.350 Sum_probs=132.3
Q ss_pred CcccCCCeEEEEcCCC---CCCCCCCCCCCCCCCCCcccEEeecCCC----CCChhHHHHHHHHHHHHHHHHcCCCEEEE
Q psy8693 1 MYLLNTNANFIVNDRD---QTWDLLHDKQDIGAGKGKYYAVNIPLRD----GMDDESYESIFVPIISKVMETFQPSAVVL 73 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~---~~yPgtG~~~~~G~g~g~g~~~NiPl~~----g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv 73 (282)
+||+||+|+|+|+|++ .||||||..+|+|.|.|+|+++||||+. +++|++|+.+|+++|.|++++|+||+|||
T Consensus 235 iF~~dp~Vl~~S~H~~~~g~~yPgtG~~~e~G~g~g~g~~vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvv 314 (421)
T 2pqp_A 235 TFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV 314 (421)
T ss_dssp HHTTCTTEEEEEEEECGGGTSTTCCCCTTCCCCGGGTTCEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEE
T ss_pred HhcCCCCEEEEecccCCCCCCCCCCCChhhccCCCCccceeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 5999999999999996 4999999999999999999999999975 47999999999999999999999999999
Q ss_pred ecCCCCCCCC--cCCCCCCCHHHHHHHHHHHHhc-CCCEEEEeCCCCCcChhHHHHHHHHHHHcCCCCc
Q psy8693 74 QCGADSLTGD--RLGCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIA 139 (282)
Q Consensus 74 ~~G~D~~~~D--plg~~~lt~~~~~~~~~~~~~~-~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~~~~ 139 (282)
|||||+|.+| |||+|+||+++|.++++++++. ++|+|++|||||+++++++||+.++.+|+|.+.+
T Consensus 315 saG~Da~~gD~dpLg~~~lt~~~y~~~~~~l~~~a~grvv~vlEGGY~l~~l~~~~~a~~~~L~g~~~~ 383 (421)
T 2pqp_A 315 SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVD 383 (421)
T ss_dssp EECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGCEEEEECSCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred eCCcccccccccccCCceeCHHHHHHHHHHHHHHcCCCEEEEECCCCChHHHHHHHHHHHHHHcCCCCC
Confidence 9999999987 9999999999999999999986 8899999999999999999999999999997653
No 8
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=7.8e-38 Score=291.71 Aligned_cols=134 Identities=21% Similarity=0.341 Sum_probs=129.2
Q ss_pred CcccCCCeEEEEcCCCC--CCCC-CCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 1 MYLLNTNANFIVNDRDQ--TWDL-LHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 77 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~--~yPg-tG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~ 77 (282)
+||+||+|+|+|+|+++ |||+ ||..+|+|.++|+|+++|||||+|++|++|+.+|+++| +++++|+||+|||||||
T Consensus 223 iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~g~g~g~~vNvPL~~g~~d~~yl~~~~~~l-~~l~~f~PdlIvvsaG~ 301 (362)
T 3men_A 223 IFYARRDVLYVSIHGDPTNFYPAVAGFDDERGAGEGLGYNVNLPMPHGSSEAAFFERVDDAL-RELRRFAPDALVLSLGF 301 (362)
T ss_dssp HTTTCSSEEEEEEEECCTTSTTCSSCCTTCCCSGGGTTSEEEEEECTTBCHHHHHHHHHHHH-HHHHHHCCSEEEEEECS
T ss_pred HhcCCCCEEEEEecCCCccCCCCCCCccccccCCCCCceeEeeccCCCCChHHHHHHHHHHH-HHHHhcCCCEEEEECcc
Confidence 59999999999999985 9998 99999999999999999999999999999999999987 67899999999999999
Q ss_pred CCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcC
Q psy8693 78 DSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALG 135 (282)
Q Consensus 78 D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g 135 (282)
|+|.+||||+|+||+++|.+|+++++++++|+++|+||||+++++++|+..++..+.+
T Consensus 302 Da~~~Dplg~l~lt~~~~~~~~~~l~~~~~~~v~vleGGY~~~~l~~~~~a~l~~l~~ 359 (362)
T 3men_A 302 DVYRDDPQSQVAVTTDGFGRLGHLIGALRLPTVIVQEGGYHIESLEANARSFFGGFGA 359 (362)
T ss_dssp TTBTTCTTCCBCBCHHHHHHHHHHHHTTCCCEEEEECCCCCHHHHHHHHHHHHHHHTC
T ss_pred cCcCCCCCCCccCCHHHHHHHHHHHHhhCCCEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999988765
No 9
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=6.7e-38 Score=290.54 Aligned_cols=133 Identities=19% Similarity=0.289 Sum_probs=127.5
Q ss_pred CcccCCCeEEEEcCCCC--CCCC-CCCCCCCCCCCCcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 1 MYLLNTNANFIVNDRDQ--TWDL-LHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 77 (282)
Q Consensus 1 ~f~~dp~v~~~s~h~~~--~yPg-tG~~~~~G~g~g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~ 77 (282)
+||+||+|+|+|+|+++ |||+ ||..+|+|.++|+|+++|||||+|++|++|+.+|+++| +.+++|+||+|||||||
T Consensus 205 iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~g~g~g~~vNvpL~~g~~d~~y~~~~~~~l-~~l~~f~Pd~ivvsaG~ 283 (341)
T 3q9b_A 205 IFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSL-KRIAAFGAEAIVVSLGV 283 (341)
T ss_dssp HHTTCTTEEEEEEEECGGGSTTCSSCCTTCCCCGGGTTCEEEEEECTTCBHHHHHHHHHHHH-HHHHHHTCSCEEEEECC
T ss_pred HhcCCCCEEEEeccCCCccCCCCCCCcccccCCCCCCceeEeeecCCCCChHHHHHHHHHHH-HHHHhhCCCEEEEeCCc
Confidence 59999999999999985 9999 99999999999999999999999999999999999987 67899999999999999
Q ss_pred CCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHc
Q psy8693 78 DSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVAL 134 (282)
Q Consensus 78 D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~ 134 (282)
|+|.+||||+|+||+++|.+|+++++++++|+++|+||||+++++++|+..++..+.
T Consensus 284 D~~~~Dplg~~~lt~~~~~~~~~~l~~~~~~~v~vleGGY~~~~l~~~~~~~l~g~~ 340 (341)
T 3q9b_A 284 DTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVA 340 (341)
T ss_dssp TTBTTCTTCCCBBCTTHHHHHHHHHHTTSSCEEEEECCCCCCTTHHHHHHHHHHHHH
T ss_pred cccCCCCCCCccCCHHHHHHHHHHHHHhCCCEEEEECCCCChHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999998887653
No 10
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=99.92 E-value=1.5e-25 Score=210.65 Aligned_cols=111 Identities=34% Similarity=0.610 Sum_probs=101.2
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMD 232 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g~~ 232 (282)
-|+|+|++++ |+++++..+++++.|+|+++. .+||+||. .+|+|.|+|+|+++||||++|++
T Consensus 175 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~------~~fPgtG~------~~e~G~g~g~g~~vNvPL~~G~~ 236 (388)
T 3ew8_A 175 VDLDLHHGDG------VEDAFSFTSKVMTVSLHKFSP------GFFPGTGD------VSDVGLGKGRYYSVNVPIQDGIQ 236 (388)
T ss_dssp EECSSSCCHH------HHHHTTTCSSEEEEEEEECCT------TCTTCCCC------TTCCCCGGGTTSEEEEEECTTCC
T ss_pred EecCCCCChh------HHHHhccCCCEEEEecCCCCC------CCCCCCCC------cccccCCCCcceeeeccCCCCCC
Confidence 5889999877 889999999999999999752 14555565 58999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 233 DESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 233 d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
|++|+++|+++|.|++++|+||+||||||||+|.+||||+|+||++||+
T Consensus 237 d~~y~~~~~~~l~p~~~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~ 285 (388)
T 3ew8_A 237 DEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIG 285 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCCcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999874
No 11
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=99.91 E-value=3e-25 Score=208.47 Aligned_cols=111 Identities=40% Similarity=0.762 Sum_probs=101.7
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMD 232 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g~~ 232 (282)
-|+|+|++++ |+++++..+++++.|+|+++. .|||+||. .+|+|.++|+|+++||||++|++
T Consensus 167 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~------~~fPgtG~------~~e~G~g~g~g~~vNvPL~~G~~ 228 (376)
T 4a69_A 167 IDIDIHHGDG------VQEAFYLTDRVMTVSFHKYGN------YFFPGTGD------MYEVGAESGRYYCLNVPLRDGID 228 (376)
T ss_dssp EECSSSCCHH------HHHHTTTCSSEEEEEEEECST------TCTTCCCC------TTCCCCGGGTTSEEEEEECTTCB
T ss_pred EeccCCCCcc------hhhHhcCCCCEEEEecccCCC------cCCCCCCC------ccccCCCCCCceeEeeecCCCCC
Confidence 5889999877 889999999999999999863 14565665 58999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 233 DESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 233 d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
|++|+++|+++|.|++++|+||+||||||||+|.+||||+|+||++||+
T Consensus 229 D~~yl~~~~~~l~p~~~~f~Pd~IvvsaG~Da~~~DpLg~l~Lt~~g~~ 277 (376)
T 4a69_A 229 DQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHG 277 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCBBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeCcccCCCCCcccCeecCHHHHH
Confidence 9999999999999999999999999999999999999999999999874
No 12
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=99.90 E-value=6.8e-25 Score=206.44 Aligned_cols=111 Identities=28% Similarity=0.383 Sum_probs=101.2
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccC-CCCCcccEEeecCCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIG-AGKGKYYAVNIPLRDGM 231 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G-~g~g~g~~~N~pl~~g~ 231 (282)
-|+|+|++++ |+++++..+++++.|+|+.+.+ |||+||. .+|+| .|+|+|+++||||++|+
T Consensus 165 vD~DvHHGnG------tq~iF~~dp~Vl~~SiH~~~~~------ffPgtG~------~~e~G~~g~g~g~~vNvPL~~g~ 226 (375)
T 1c3p_A 165 IDLDAHHCDG------VQEAFYDTDQVFVLSLHQSPEY------AFPFEKG------FLEEIGEGKGKGYNLNIPLPKGL 226 (375)
T ss_dssp EECSSSCCHH------HHHHHTTCSSEEEEEEEECTTT------STTSSSC------CTTCCCCGGGTTSEEEEEECTTC
T ss_pred EecCCCCCHH------HHHHhccCCCEEEEecccCCCC------CCCCCCC------ccccCCcCCCCceEEEEeCCCCC
Confidence 5889999877 8899999999999999997643 4555565 57998 89999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 232 DDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 232 ~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
+|++|+++|+++|.|++++|+||+||||||||+|.+||||+|+||++||.
T Consensus 227 ~D~~yl~a~~~~l~p~l~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~ 276 (375)
T 1c3p_A 227 NDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFL 276 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCEEEEECCccccCCCCCCCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999874
No 13
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=99.90 E-value=4.5e-25 Score=207.26 Aligned_cols=109 Identities=21% Similarity=0.335 Sum_probs=100.5
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCC-CcceeccccCCCccccCCCcccCCCCCcccEEeecCCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAP-GVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGM 231 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~P-gvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g~ 231 (282)
-|+|+|++++ |+++++..+++++.|+|+.+.+| ++ |. .+|+|.|+|+|+++||||++|+
T Consensus 177 vD~DvHHGnG------Tq~iF~~d~~Vl~~SiH~~~~yP~~t--------G~------~~e~G~g~g~g~~vNvPL~~g~ 236 (369)
T 1zz1_A 177 LDWDVHHGNG------TQDIWWNDPSVLTISLHQHLCFPPDS--------GY------STERGAGNGHGYNINVPLPPGS 236 (369)
T ss_dssp EECSSSCCHH------HHHHTTTCTTEEEEEEEETTSSSTTC--------CC------TTCCCCGGGTTCEEEEEECTTC
T ss_pred EecCCCCchh------hhHHhcCCCCEEEEeccCCCCCCCCC--------Cc------ccccCCCCCCceEEeeecCCCC
Confidence 4889999877 88999999999999999987555 44 44 5799999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 232 DDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 232 ~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
+|++|+++|+++|+|++++|+||+||||||||+|.+||||+|+||++||.
T Consensus 237 ~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~ 286 (369)
T 1zz1_A 237 GNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFR 286 (369)
T ss_dssp BHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTCCCBBCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCCCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999874
No 14
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=99.90 E-value=8.4e-25 Score=204.55 Aligned_cols=110 Identities=56% Similarity=0.901 Sum_probs=101.1
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMD 232 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g~~ 232 (282)
-|+|+|++++ |+++++..+++++.|+|+.+. +||+||. .+|+|.|+|+|+++||||++|++
T Consensus 167 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~-------~fPgtg~------~~e~G~g~g~g~~vNvPL~~g~~ 227 (367)
T 3max_A 167 IDIDIHHGDG------VEEAFYTTDRVMTVSFHKYGE-------YFPGTGD------LRDIGAGKGKYYAVNFPMRDGID 227 (367)
T ss_dssp EECSSSCCHH------HHHHTTTCSSEEEEEEEECSS-------CTTCCCC------TTCCCCGGGTTCEEEEEECTTCC
T ss_pred EecCCCCCch------hhHHhcCCCCEEEEecccCCC-------CCCCCCC------ccccCCCCCCceEEEEecCCCCC
Confidence 5889999877 889999999999999999751 4566665 58999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 233 DESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 233 d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
|++|+++|+++|.|++++|+||+||||||||+|.+||||.|+||++||+
T Consensus 228 d~~y~~~~~~~~~~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~g~~ 276 (367)
T 3max_A 228 DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHA 276 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEECCccCcCCCCCCCeeeCHHHHH
Confidence 9999999999999999999999999999999999999999999999874
No 15
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=99.88 E-value=1.1e-23 Score=195.29 Aligned_cols=109 Identities=23% Similarity=0.356 Sum_probs=97.4
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCC--CCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLP--HAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDG 230 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~--~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g 230 (282)
-|+|+|++++ |+++++..+++++.|+|+.| .+|+. +|. .+|+|.++|+|+++||||++|
T Consensus 192 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~~~yP~~-------tG~------~~e~G~g~g~g~~vNvpL~~g 252 (341)
T 3q9b_A 192 LDVDFHHGNG------TQDIFYERGDVFFASLHGDPAEAFPHF-------LGY------AEETGKGAGAGTTANYPMGRG 252 (341)
T ss_dssp EECSSSCCHH------HHHHHTTCTTEEEEEEEECGGGSTTCS-------SCC------TTCCCCGGGTTCEEEEEECTT
T ss_pred EecCCCCCcc------hhHHhcCCCCEEEEeccCCCccCCCCC-------CCc------ccccCCCCCCceeEeeecCCC
Confidence 5789999876 88999999999999999975 44441 344 589999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 231 MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 231 ~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
++|++|+++|+++ +|.+++|+||+||||||||+|.+|||++|+||++||.
T Consensus 253 ~~d~~y~~~~~~~-l~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~ 302 (341)
T 3q9b_A 253 TPYSVWGEALTDS-LKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYI 302 (341)
T ss_dssp CBHHHHHHHHHHH-HHHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHH
T ss_pred CChHHHHHHHHHH-HHHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHH
Confidence 9999999999886 5789999999999999999999999999999999974
No 16
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=99.88 E-value=1.3e-23 Score=195.96 Aligned_cols=109 Identities=24% Similarity=0.355 Sum_probs=97.4
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCC--CCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCCC
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLP--HAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDG 230 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~--~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~g 230 (282)
-|+|+|++++ |+++++..+++++.|+|+.| .+|+. +|. .+|+|.++|+|+++||||++|
T Consensus 210 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~~~yP~~-------tG~------~~e~G~g~g~g~~vNvPL~~g 270 (362)
T 3men_A 210 LDTDMHHGQG------IQEIFYARRDVLYVSIHGDPTNFYPAV-------AGF------DDERGAGEGLGYNVNLPMPHG 270 (362)
T ss_dssp EECSSSCCHH------HHHHTTTCSSEEEEEEEECCTTSTTCS-------SCC------TTCCCSGGGTTSEEEEEECTT
T ss_pred EeCcCCCchh------HhHHhcCCCCEEEEEecCCCccCCCCC-------CCc------cccccCCCCCceeEeeccCCC
Confidence 5889999876 88999999999999999975 44441 344 589999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCCCcccccccccC
Q psy8693 231 MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281 (282)
Q Consensus 231 ~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~Dpl~~~~lt~~~~~ 281 (282)
++|++|+++|+++ +|++++|+||+||||||||+|.+|||++|+||++||+
T Consensus 271 ~~d~~yl~~~~~~-l~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~ 320 (362)
T 3men_A 271 SSEAAFFERVDDA-LRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFG 320 (362)
T ss_dssp BCHHHHHHHHHHH-HHHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHH
T ss_pred CChHHHHHHHHHH-HHHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHH
Confidence 9999999999886 5889999999999999999999999999999999874
No 17
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=99.88 E-value=1.5e-23 Score=198.43 Aligned_cols=112 Identities=22% Similarity=0.414 Sum_probs=99.4
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCC---
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRD--- 229 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~--- 229 (282)
-|||+|++++ |+++++..+++++.|+|+++.++ |||++|. .+|+|.|.|+|+++||||+.
T Consensus 222 vD~DvHHGnG------tq~iF~~dp~Vl~~S~H~~~~g~-----~yPgtG~------~~e~G~g~g~g~~vNvPl~~gl~ 284 (421)
T 2pqp_A 222 VDWDVHHGNG------TQQTFYQDPSVLYISLHRHDDGN-----FFPGSGA------VDEVGAGSGEGFNVNVAWAGGLD 284 (421)
T ss_dssp EECSSSCCHH------HHHHHTTCTTEEEEEEEECGGGT-----STTCCCC------TTCCCCGGGTTCEEEEEECSCSS
T ss_pred EecCCCCChh------HHHHhcCCCCEEEEecccCCCCC-----CCCCCCC------hhhccCCCCccceeccccCCCCC
Confidence 4789999876 88999999999999999975322 4565565 58999999999999999975
Q ss_pred -CCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC--CCCcccccccccC
Q psy8693 230 -GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD--RLGCFNLTVRDCS 281 (282)
Q Consensus 230 -g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~D--pl~~~~lt~~~~~ 281 (282)
+++|++|+++|+++|+|++++|+||+||||||||+|.+| |||+|+||+++|+
T Consensus 285 ~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~dpLg~~~lt~~~y~ 339 (421)
T 2pqp_A 285 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFG 339 (421)
T ss_dssp SCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcccccccccccCCceeCHHHHH
Confidence 479999999999999999999999999999999999987 9999999999874
No 18
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=99.86 E-value=1.1e-22 Score=193.72 Aligned_cols=112 Identities=24% Similarity=0.441 Sum_probs=100.8
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhhhhhhccccCCCCCCcceeccccCCCccccCCCcccCCCCCcccEEeecCCC---
Q psy8693 153 PDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRD--- 229 (282)
Q Consensus 153 pdf~l~v~~~~~~~~Nt~e~le~i~~vl~esL~~~~~~Pgvq~~f~p~~~~~~~~~~~~e~G~g~g~g~~~N~pl~~--- 229 (282)
-|+|+|++++ |++++...+++++.|+|+++.++ |+|+||. .+|+|.++|+|+++|+||+.
T Consensus 193 vD~DvHHGnG------tq~iF~~d~~Vl~~S~H~~~~~~-----f~pgtG~------~~e~G~g~g~g~~~n~pl~~g~~ 255 (413)
T 2vqm_A 193 VDWDVHHGNG------TQQAFYSDPSVLYMSLHRYDDGN-----FFPGSGA------PDEVGTGPGVGFNVNMAFTGGLD 255 (413)
T ss_dssp EECSSSCCHH------HHHHHTTCTTEEEEEEEECGGGC-----STTCCCC------TTCCCSGGGTTCEEEEEECSCSS
T ss_pred EecccCCCcc------HHHHHhcCcccccccchhccCCC-----CCCCCCC------HHHcCCCcccccccccccccccC
Confidence 5889999877 88999999999999999986554 4566676 58999999999999999874
Q ss_pred -CCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC--CCCCcccccccccC
Q psy8693 230 -GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG--DRLGCFNLTVRDCS 281 (282)
Q Consensus 230 -g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~--Dpl~~~~lt~~~~~ 281 (282)
+++|++|+++|+++|+|++++|+||+||||||||+|.+ ||||+|+||+++|+
T Consensus 256 ~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg~~~lt~~~~~ 310 (413)
T 2vqm_A 256 PPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFG 310 (413)
T ss_dssp SCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTCCCCBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCCCcccCHHHHH
Confidence 58999999999999999999999999999999999998 66999999999874
No 19
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.04 E-value=0.43 Score=39.61 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=39.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC-CCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA-DSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMV 112 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~-D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v 112 (282)
.+|..+.-.+ -...+.-+++. +..++||+||+..|. |...+-+.....-..+.+..+++.+++.+.+++++
T Consensus 53 viN~Gi~G~t-t~~~l~r~~~~----v~~~~Pd~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~ 124 (209)
T 4hf7_A 53 YIGRGISGQT-SYQFLLRFRED----VINLSPALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKANKIKVILT 124 (209)
T ss_dssp EEEEECTTCC-HHHHHHHHHHH----TGGGCCSEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeccCccc-HHHHHHHHHHH----HHhcCCCEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhccCceEEEE
Confidence 4677665333 33444444432 336899999999997 33332222222223345566777777766666554
No 20
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=84.65 E-value=3 Score=33.77 Aligned_cols=60 Identities=13% Similarity=0.268 Sum_probs=39.8
Q ss_pred ccEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHH----HHHHHHHhcC
Q psy8693 35 YYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHG----KCVEFVKRYN 106 (282)
Q Consensus 35 g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~----~~~~~~~~~~ 106 (282)
....|.....+++....++.+++ .+...+||+||+..|.. | +..+.+.|. .+++.+++.+
T Consensus 46 ~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~N----D----~~~~~~~~~~~l~~ii~~l~~~~ 109 (200)
T 4h08_A 46 AYVGRLSNSKSVGDPALIEELAV----VLKNTKFDVIHFNNGLH----G----FDYTEEEYDKSFPKLIKIIRKYA 109 (200)
T ss_dssp CEEEEEEESCCTTCHHHHHHHHH----HHHHSCCSEEEECCCSS----C----TTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEeccCCccHHHHHHHHHH----HHhcCCCCeEEEEeeeC----C----CCCCHHHHHHHHHHHHHHHhhhC
Confidence 44567777777777766665554 45579999999999964 3 235666655 4556666653
No 21
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=81.66 E-value=1.5 Score=34.89 Aligned_cols=66 Identities=18% Similarity=0.280 Sum_probs=37.7
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcCCCEEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYNLPFLMV 112 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~~~~~~v 112 (282)
.+|..++ |.+-...+..++ ..+..++||+||++.|.. |-.. ..+.+. +.++++.+++.+.+++++
T Consensus 41 v~n~g~~-G~~~~~~~~~~~----~~~~~~~pd~vvi~~G~N----D~~~--~~~~~~~~~~~~~~i~~~~~~~~~vvl~ 109 (185)
T 3hp4_A 41 LINASIS-GETSGGALRRLD----ALLEQYEPTHVLIELGAN----DGLR--GFPVKKMQTNLTALVKKSQAANAMTALM 109 (185)
T ss_dssp EEECCCT-TCCHHHHHHHHH----HHHHHHCCSEEEEECCHH----HHHT--TCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCcC-CccHHHHHHHHH----HHHhhcCCCEEEEEeecc----cCCC--CcCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3455553 333344444443 445678999999999953 2221 234444 445666777776666655
Q ss_pred e
Q psy8693 113 G 113 (282)
Q Consensus 113 ~ 113 (282)
.
T Consensus 110 ~ 110 (185)
T 3hp4_A 110 E 110 (185)
T ss_dssp C
T ss_pred e
Confidence 3
No 22
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=78.69 E-value=4 Score=32.56 Aligned_cols=47 Identities=21% Similarity=0.310 Sum_probs=30.4
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcCCCEEEE
Q psy8693 60 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYNLPFLMV 112 (282)
Q Consensus 60 ~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~~~~~~v 112 (282)
...+...+||+||++.|.. |-.. ..+.+. +.++++.+++.+.+++++
T Consensus 55 ~~~~~~~~pd~Vii~~G~N----D~~~--~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 55 PALLKQHQPRWVLVELGGN----DGLR--GFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp HHHHHHHCCSEEEEECCTT----TTSS--SCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhcCCCEEEEEeecc----cccc--CCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3455678999999999964 3222 244544 445666677666666655
No 23
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=77.63 E-value=4.5 Score=33.24 Aligned_cols=70 Identities=11% Similarity=0.168 Sum_probs=40.2
Q ss_pred cEEeecCCCCCChhHHHHHHHHHHHHHHHH-cCCCEEEEecCC-CCCCCCcCCCCCCCHHHHH----HHHHHHHhcCCCE
Q psy8693 36 YAVNIPLRDGMDDESYESIFVPIISKVMET-FQPSAVVLQCGA-DSLTGDRLGCFNLTVRGHG----KCVEFVKRYNLPF 109 (282)
Q Consensus 36 ~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~-f~Pd~ivv~~G~-D~~~~Dplg~~~lt~~~~~----~~~~~~~~~~~~~ 109 (282)
..+|..+.. .+-...+..+++ ++.. .+||+||++.|. |.... . .-..+.+.|. ++++.+++.+.++
T Consensus 45 ~v~n~g~~G-~~~~~~~~~~~~----~~~~~~~pd~vvi~~G~ND~~~~-~--~~~~~~~~~~~~l~~~i~~~~~~~~~v 116 (240)
T 3mil_A 45 DILQRGFKG-YTSRWALKILPE----ILKHESNIVMATIFLGANDACSA-G--PQSVPLPEFIDNIRQMVSLMKSYHIRP 116 (240)
T ss_dssp EEEEEECTT-CCHHHHHHHHHH----HHHHCCCEEEEEEECCTTTTSSS-S--TTCCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEecCcCc-ccHHHHHHHHHH----HhcccCCCCEEEEEeecCcCCcc-C--CCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 346666543 334445554443 4444 799999999997 33221 1 2234555554 4566667767666
Q ss_pred EEEe
Q psy8693 110 LMVG 113 (282)
Q Consensus 110 ~~v~ 113 (282)
+++.
T Consensus 117 il~~ 120 (240)
T 3mil_A 117 IIIG 120 (240)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6654
No 24
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=73.74 E-value=3.7 Score=33.71 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc--CCCEEEE
Q psy8693 48 DESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY--NLPFLMV 112 (282)
Q Consensus 48 d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~--~~~~~~v 112 (282)
-.+.+..++ ..+...+||+||++.|..=.. .....+.+.+..+++.+++. +.+++++
T Consensus 68 ~~~~~~~l~----~~l~~~~pd~vvi~~G~ND~~----~~~~~~~~~l~~li~~i~~~~p~~~ii~~ 126 (215)
T 2vpt_A 68 IPQIASNIN----NWLNTHNPDVVFLWIGGNDLL----LNGNLNATGLSNLIDQIFTVKPNVTLFVA 126 (215)
T ss_dssp HHHHHHHHH----HHHHHHCCSEEEEECCHHHHH----HHCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHH----HHhhccCCCEEEEEccccccC----CCCChhHHHHHHHHHHHHHhCCCCEEEEE
Confidence 344444443 344578999999999963221 12234578999999999886 4555544
No 25
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=71.39 E-value=3 Score=33.44 Aligned_cols=69 Identities=13% Similarity=0.177 Sum_probs=38.1
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHH----HHHHHHHhcCCCEEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHG----KCVEFVKRYNLPFLMV 112 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~----~~~~~~~~~~~~~~~v 112 (282)
.+|..+...+ -...+..++ ..+..++||+||++.|..=.... .-..+.+.|. ++++.+++.+.+++++
T Consensus 49 v~n~g~~G~~-~~~~~~~~~----~~~~~~~pd~vvi~~G~ND~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~vil~ 120 (204)
T 3p94_A 49 FVDRGISGQT-TSEMLVRFR----QDVINLKPKAVVILAGINDIAHN---NGVIALENVFGNLVSMAELAKANHIKVIFC 120 (204)
T ss_dssp EEEEECTTCC-HHHHHHHHH----HHTGGGCEEEEEEECCHHHHTTT---TSCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eEEcccCccc-HHHHHHHHH----HHHHhCCCCEEEEEeecCccccc---cCCCCHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 4666664333 333444333 33446899999999996432221 0114555544 4566666656666655
Q ss_pred e
Q psy8693 113 G 113 (282)
Q Consensus 113 ~ 113 (282)
.
T Consensus 121 ~ 121 (204)
T 3p94_A 121 S 121 (204)
T ss_dssp C
T ss_pred e
Confidence 3
No 26
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=71.25 E-value=7.5 Score=33.28 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=27.3
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC-CCCCCCcCCC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA-DSLTGDRLGC 87 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~-D~~~~Dplg~ 87 (282)
.+|..+.-. +-...+..+++++.. ...+||+|+|..|. |.....|++.
T Consensus 61 v~N~G~~G~-tt~~~~~~~~~~l~~--~~~~pd~V~I~~G~ND~~~~~~~~~ 109 (274)
T 3bzw_A 61 PFVYGISGR-QWDDVPRQAEKLKKE--HGGEVDAILVFMGTNDYNSSVPIGE 109 (274)
T ss_dssp EEECCCTTC-CGGGHHHHHHHHHHH--HTTTCCEEEEECCHHHHHTTCCCCC
T ss_pred EEEeecCCC-CHHHHHHHHHHHHhc--cCCCCCEEEEEEecccCcccCCCcc
Confidence 345544432 233355555553321 23799999999998 5555555554
No 27
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=68.73 E-value=5.6 Score=32.14 Aligned_cols=50 Identities=22% Similarity=0.238 Sum_probs=31.3
Q ss_pred HHHHHHcCC-CEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcC---------CCEEEEe
Q psy8693 60 SKVMETFQP-SAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYN---------LPFLMVG 113 (282)
Q Consensus 60 ~~~~~~f~P-d~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~---------~~~~~v~ 113 (282)
...+..++| |+||++.|.. |-...+..+.+. +.++++.+++.+ .+++++.
T Consensus 75 ~~~l~~~~p~d~vvi~~G~N----D~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~ 138 (216)
T 2q0q_A 75 PSCLATHLPLDLVIIMLGTN----DTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVS 138 (216)
T ss_dssp HHHHHHHCSCSEEEEECCTG----GGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEE
T ss_pred HHHHHhCCCCCEEEEEecCc----ccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEe
Confidence 345567898 9999999973 322223455555 445666677666 5666663
No 28
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=68.59 E-value=7.8 Score=36.26 Aligned_cols=69 Identities=12% Similarity=0.244 Sum_probs=44.1
Q ss_pred cCCCCCCh-hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC
Q psy8693 41 PLRDGMDD-ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGY 117 (282)
Q Consensus 41 Pl~~g~~d-~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY 117 (282)
||-..+.. .++...|.+.+ |-+++|+-..|||-.|-.++..+- .+...+-...+++.+.++|+|.+||-
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~yi~~~~~~~iViK~GG~~l~~~~-------~~~~~~~i~~l~~~g~~vvlVhggg~ 85 (456)
T 3d2m_A 16 PRGSHMNAPDSFVAHFREAA-PYIRQMRGTTLVAGIDGRLLEGGT-------LNKLAADIGLLSQLGIRLVLIHGAYH 85 (456)
T ss_dssp ---------CCHHHHHHHHH-HHHHHHTTCEEEEEECGGGGTSTH-------HHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred cCcccCCchhHHHHHHHHhH-HHHHHhcCCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 44444443 56888898886 889999999999999988876421 22333333344455778888888883
No 29
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=67.21 E-value=8.9 Score=31.77 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=26.7
Q ss_pred HHHHHHcCC-CEEEEecCCCCCCCCcCCCCCCCHHHHH----HHHHHHHhc
Q psy8693 60 SKVMETFQP-SAVVLQCGADSLTGDRLGCFNLTVRGHG----KCVEFVKRY 105 (282)
Q Consensus 60 ~~~~~~f~P-d~ivv~~G~D~~~~Dplg~~~lt~~~~~----~~~~~~~~~ 105 (282)
...+...+| |+|||..|.. |-......+.+.|. ++++.+++.
T Consensus 93 ~~~l~~~~p~d~VvI~~GtN----D~~~~~~~~~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 93 EVALSCHMPLDLVIIMLGTN----DIKPVHGGRAEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp HHHHHHHCSCSEEEEECCTT----TTSGGGTSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhCCCCCEEEEEeccC----CCccccCCCHHHHHHHHHHHHHHHHHh
Confidence 345567899 9999999963 43333334555554 456666664
No 30
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=66.71 E-value=3.6 Score=30.45 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCC-----CHHHHHHHHHHHHhcCCCEEEE
Q psy8693 56 VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNL-----TVRGHGKCVEFVKRYNLPFLMV 112 (282)
Q Consensus 56 ~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~l-----t~~~~~~~~~~~~~~~~~~~~v 112 (282)
+++|..++++|.-++=|++++.|...+.++|.|-+ +.+...++.+.+++.+..+=++
T Consensus 34 ~PvIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 34 EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVL 95 (98)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEEEEETTEEEEEEEEEESCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred chHHHHHHHHHCCcEEEEEEEeEEeCCEeEEEEEEEEeCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 56777888899999999999999999999999876 3566777888888877654343
No 31
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=66.08 E-value=7.1 Score=34.21 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC
Q psy8693 51 YESIFVPIISKVMETFQPSAVVLQCGADSLTG 82 (282)
Q Consensus 51 y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~ 82 (282)
+...+.+.|..++++++||+|+.-.|.|.|.+
T Consensus 132 ~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpD 163 (273)
T 3dff_A 132 LVGEVADDIRSIIDEFDPTLVVTCAAIGEHPD 163 (273)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECCCCCCChH
Confidence 45566677778999999999999888776654
No 32
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=66.02 E-value=22 Score=28.70 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcCh
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRN 121 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~ 121 (282)
.+++++. .+++.+||+||+. | |.. ......+.+.++.+.+++.+.|+++| -|-.+...
T Consensus 20 ~~~~~~~-~~~~~~~D~vi~~-G-Dl~------~~~~~~~~~~~~~~~l~~~~~pv~~v-~GNHD~~~ 77 (228)
T 1uf3_A 20 ALEKFVK-LAPDTGADAIALI-G-NLM------PKAAKSRDYAAFFRILSEAHLPTAYV-PGPQDAPI 77 (228)
T ss_dssp HHHHHHT-HHHHHTCSEEEEE-S-CSS------CTTCCHHHHHHHHHHHGGGCSCEEEE-CCTTSCSH
T ss_pred HHHHHHH-HHhhcCCCEEEEC-C-CCC------CCCCCHHHHHHHHHHHHhcCCcEEEE-CCCCCchh
Confidence 3444443 3455599987753 3 322 22224567777888888778887655 55555443
No 33
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=64.59 E-value=8.4 Score=33.66 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC
Q psy8693 52 ESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83 (282)
Q Consensus 52 ~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~D 83 (282)
...+.+.|..++++++||+|+.-.|.|.|.+-
T Consensus 130 ~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpDH 161 (270)
T 3dfi_A 130 VAAIREDIESMIAECDPTLVLTCVAIGKHPDH 161 (270)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCCCCCCChhH
Confidence 45666677789999999999998887766543
No 34
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=64.45 E-value=4.3 Score=33.67 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=36.6
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHH----HHHHHHHHHHhc--CCCEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVR----GHGKCVEFVKRY--NLPFL 110 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~----~~~~~~~~~~~~--~~~~~ 110 (282)
.+|..+.. .+-..++..+++ .++...+||+||++.|..=.. .+.+ .+..+++.+++. +.+++
T Consensus 67 v~n~g~~G-~t~~~~~~~~~~---~~l~~~~pd~vvi~~G~ND~~--------~~~~~~~~~l~~~i~~l~~~~p~~~ii 134 (232)
T 1es9_A 67 ALNFGIGG-DSTQHVLWRLEN---GELEHIRPKIVVVWVGTNNHG--------HTAEQVTGGIKAIVQLVNERQPQARVV 134 (232)
T ss_dssp EEEEECTT-CCHHHHHHHHHT---TTTTTCCCSEEEEECCTTCTT--------SCHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred eEEeeccc-ccHHHHHHHHhc---CccccCCCCEEEEEeecCCCC--------CCHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 46665543 333334333332 124467999999999974322 3444 455566666665 45566
Q ss_pred EEe
Q psy8693 111 MVG 113 (282)
Q Consensus 111 ~v~ 113 (282)
++.
T Consensus 135 ~~~ 137 (232)
T 1es9_A 135 VLG 137 (232)
T ss_dssp EEC
T ss_pred Eec
Confidence 554
No 35
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=63.56 E-value=19 Score=31.90 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcC--CCEEEEeCCCCCc
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYN--LPFLMVGGGGYTI 119 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~--~~~~~v~eGGY~~ 119 (282)
++...++++++ ..+++.+||+||+ +| |. =+-.-..+.+....+.+.++++. .|++++ -|-.+.
T Consensus 44 ~~~~~~l~~lv-~~~~~~~~D~vli-aG-D~----l~d~~~~~~~~~~~~~~~l~~L~~~~pv~~i-~GNHD~ 108 (336)
T 2q8u_A 44 EELKKALDKVV-EEAEKREVDLILL-TG-DL----LHSRNNPSVVALHDLLDYLKRMMRTAPVVVL-PGNHDW 108 (336)
T ss_dssp HHHHHHHHHHH-HHHHHHTCSEEEE-ES-CS----BSCSSCCCHHHHHHHHHHHHHHHHHSCEEEC-CC----
T ss_pred HHHHHHHHHHH-HHHHHhCCCEEEE-CC-cc----ccCCCCCCHHHHHHHHHHHHHHHhcCCEEEE-CCCCCc
Confidence 44567787777 4566789998776 44 41 22222335554444444444432 776554 555543
No 36
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=63.36 E-value=8.8 Score=33.62 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC
Q psy8693 236 YESIFVPIISKVMETFQPSAVVLQCGADSLTG 267 (282)
Q Consensus 236 y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~ 267 (282)
+...+.+.|..++++++||+|+.-.|.|.|.+
T Consensus 132 ~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpD 163 (273)
T 3dff_A 132 LVGEVADDIRSIIDEFDPTLVVTCAAIGEHPD 163 (273)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECCCCCCChH
Confidence 45566677789999999999999999998753
No 37
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=62.97 E-value=9.5 Score=33.30 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC
Q psy8693 235 SYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267 (282)
Q Consensus 235 ~y~~~~~~~~~~~~~~f~P~~ivvsaG~D~~~~ 267 (282)
.....+.+.|..++++++||+|+.-.|.|.|-+
T Consensus 128 ~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpD 160 (270)
T 3dfi_A 128 DLVAAIREDIESMIAECDPTLVLTCVAIGKHPD 160 (270)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEeCCCCCCChh
Confidence 345566677789999999999999999988753
No 38
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=62.69 E-value=6.8 Score=35.85 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=38.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCC-CEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcCCCEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQP-SAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYNLPFLM 111 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~P-d~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~~~~~~ 111 (282)
.+|..+.-. +-..++.. ..+.+++.+++| |+|||+.|.. |-......+.+. +..+++.+++.+.++++
T Consensus 202 v~N~GisG~-tt~~~l~~--~rl~~~l~~~~p~d~VvI~~G~N----D~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vil 274 (375)
T 2o14_A 202 VRNMASGGQ-IARGFRND--GQLEAILKYIKPGDYFMLQLGIN----DTNPKHKESEAEFKEVMRDMIRQVKAKGADVIL 274 (375)
T ss_dssp EEECCCTTC-CHHHHHHS--SHHHHHHTTCCTTCEEEEECCTG----GGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEeccCCC-cHhhhhhc--ccHHHHHHhCCCCCEEEEEEEcc----CCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 566665433 23333320 124456678999 9999999973 322112234544 45566667766666655
Q ss_pred E
Q psy8693 112 V 112 (282)
Q Consensus 112 v 112 (282)
+
T Consensus 275 v 275 (375)
T 2o14_A 275 S 275 (375)
T ss_dssp E
T ss_pred E
Confidence 5
No 39
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=62.61 E-value=1.7 Score=35.07 Aligned_cols=52 Identities=15% Similarity=0.106 Sum_probs=29.4
Q ss_pred HHHHHcCCCEEEEecCC-CCCCCCcCC---CCCCCHHHHH----HHHHHHHhcCCCEEEE
Q psy8693 61 KVMETFQPSAVVLQCGA-DSLTGDRLG---CFNLTVRGHG----KCVEFVKRYNLPFLMV 112 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~-D~~~~Dplg---~~~lt~~~~~----~~~~~~~~~~~~~~~v 112 (282)
..+...+||+||++.|. |.....+-+ ....+.+.|. ++++.+++.+.+++++
T Consensus 77 ~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~ 136 (216)
T 3rjt_A 77 DDVMALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREMFLL 136 (216)
T ss_dssp HHTGGGCCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSEEEEE
T ss_pred hHHhhcCCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 34457899999999996 222111100 0134455554 4556666666666665
No 40
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=62.16 E-value=9.3 Score=29.95 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=37.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHH-HHhc-CCCEEEEe
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEF-VKRY-NLPFLMVG 113 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~-~~~~-~~~~~~v~ 113 (282)
.+|..++ |.+-...+..++ ..+...+||+||++.|..=.. .....+.+.|..-.+. +..+ +.+++++.
T Consensus 42 v~n~g~~-G~~~~~~~~~~~----~~~~~~~pd~vvi~~G~ND~~----~~~~~~~~~~~~~l~~~i~~~~~~~vi~~~ 111 (195)
T 1yzf_A 42 VINAGMP-GDTTEDGLKRLN----KEVLIEKPDEVVIFFGANDAS----LDRNITVATFRENLETMIHEIGSEKVILIT 111 (195)
T ss_dssp EEEEECT-TCCHHHHHHHHH----HHTGGGCCSEEEEECCTTTTC----TTSCCCHHHHHHHHHHHHHHHCGGGEEEEC
T ss_pred EEeCCCC-CCCHHHHHHHHH----HhhhhcCCCEEEEEeeccccC----ccCCCCHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 4566655 333444444443 334568999999999974332 1224566666553322 2222 45555553
No 41
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=60.15 E-value=27 Score=30.75 Aligned_cols=61 Identities=16% Similarity=0.362 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC
Q psy8693 50 SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGY 117 (282)
Q Consensus 50 ~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY 117 (282)
++.+.|++.+ |-+++|+=..||+-.|-.++.++. ..+.+.+-...+++.+.++++|.+||-
T Consensus 9 ~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~~~------~~~~~~~~i~~l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 9 QVAKVLSEAL-PYIRRFVGKTLVIKYGGNAMESEE------LKAGFARDVVLMKAVGINPVVVHGGGP 69 (300)
T ss_dssp HHHHHHHHHH-HHHHHHTTCEEEEEECCTTTTSSH------HHHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHh-HHHHHhcCCeEEEEECchhhCCch------HHHHHHHHHHHHHHCCCeEEEEECCcH
Confidence 5777888876 789999999999999988886531 012222223334455778899999875
No 42
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=60.12 E-value=22 Score=32.27 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHh---cCCCEEEEeC
Q psy8693 50 SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKR---YNLPFLMVGG 114 (282)
Q Consensus 50 ~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~---~~~~~~~v~e 114 (282)
+...++++++. .+.+-+||+||+ || |. +..-.-+.+.+..+.+.+++ .+.|+++|.|
T Consensus 44 ~~~~~l~~~v~-~~~~~~~D~Vli-aG-Dl-----~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~v~G 103 (386)
T 3av0_A 44 DIYDSFKLCIK-KILEIKPDVVLH-SG-DL-----FNDLRPPVKALRIAMQAFKKLHENNIKVYIVAG 103 (386)
T ss_dssp HHHHHHHHHHH-HHHTTCCSEEEE-CS-CS-----BSSSSCCHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHH-HHHHcCCCEEEE-CC-CC-----CCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 34567777764 556789999886 33 33 22223345555555555444 4678766543
No 43
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=59.59 E-value=40 Score=29.68 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHH---HHHHHhcCCCEEEEeCCCCCc
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKC---VEFVKRYNLPFLMVGGGGYTI 119 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~---~~~~~~~~~~~~~v~eGGY~~ 119 (282)
+++..++++++ ..+.+.+||+||++ | |.. -...-+.+.+..+ .+.+++.+.|++++ -|-.+.
T Consensus 23 ~~~~~~~~~~~-~~~~~~~~D~vl~~-G-Dl~-----d~~~~~~~~~~~~~~~l~~l~~~~~~v~~v-~GNHD~ 87 (333)
T 1ii7_A 23 EEFAEAFKNAL-EIAVQENVDFILIA-G-DLF-----HSSRPSPGTLKKAIALLQIPKEHSIPVFAI-EGNHDR 87 (333)
T ss_dssp HHHHHHHHHHH-HHHHHTTCSEEEEE-S-CSB-----SSSSCCHHHHHHHHHHHHHHHTTTCCEEEE-CCTTTC
T ss_pred HHHHHHHHHHH-HHHHhcCCCEEEEC-C-CcC-----CCCCCCHHHHHHHHHHHHHHHHCCCcEEEe-CCcCCC
Confidence 34556777776 45678899988763 3 332 2222344444444 44444456787665 454443
No 44
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=56.05 E-value=13 Score=34.16 Aligned_cols=52 Identities=10% Similarity=0.179 Sum_probs=31.1
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc--CCCEEEEe
Q psy8693 60 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY--NLPFLMVG 113 (282)
Q Consensus 60 ~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~--~~~~~~v~ 113 (282)
...+.+.+||+|||.+|..=...+ + ...--.+.+..+++.+++. +.||+++.
T Consensus 237 ~~~l~~~~pdlVvI~lGtND~~~~-~-~~~~~~~~l~~li~~ir~~~P~a~Illv~ 290 (385)
T 3skv_A 237 ARLIRDLPADLISLRVGTSNFMDG-D-GFVDFPANLVGFVQIIRERHPLTPIVLGS 290 (385)
T ss_dssp HHHHHHSCCSEEEEEESHHHHTTT-C-CTTTHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred HHHHhccCCCEEEEEeeccCCCCC-C-CHHHHHHHHHHHHHHHHHHCCCCcEEEEc
Confidence 344567789999999986433222 1 1222345666777777765 45666553
No 45
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=55.42 E-value=4.3 Score=33.21 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=37.6
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHH---cCCCEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcCCCE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMET---FQPSAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYNLPF 109 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~---f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~~~~ 109 (282)
.+|..++. .+-...+..++. .+++. .+||+|||+.|..=... ..+....+.+. +..+++.+++. .++
T Consensus 59 v~n~g~~G-~t~~~~~~~~~~---~~~~~~~~~~pd~vvi~~G~ND~~~-~~~~~~~~~~~~~~~l~~li~~l~~~-~~i 132 (218)
T 1vjg_A 59 YYNLGIRR-DTSSDIAKRWLQ---EVSLRLHKEYNSLVVFSFGLNDTTL-ENGKPRVSIAETIKNTREILTQAKKL-YPV 132 (218)
T ss_dssp EEEEECTT-CCHHHHHHHHHH---HHHTTCCTTSEEEEEEECCHHHHCE-ETTEESSCHHHHHHHHHHHHHHHHHH-SCE
T ss_pred EEeCCCCC-cCHHHHHHHhHH---hhhhhhccCCCCEEEEEecCCcchh-hcccccCCHHHHHHHHHHHHHHHHHh-CcE
Confidence 35665543 333344444433 23333 59999999999622110 00011345544 44566666666 677
Q ss_pred EEEeC
Q psy8693 110 LMVGG 114 (282)
Q Consensus 110 ~~v~e 114 (282)
+++.-
T Consensus 133 il~~~ 137 (218)
T 1vjg_A 133 LMISP 137 (218)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77643
No 46
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=54.08 E-value=20 Score=28.62 Aligned_cols=39 Identities=10% Similarity=0.170 Sum_probs=25.1
Q ss_pred cEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 221 YAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 221 ~~~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
...|.....+++....++.+++ .+...+||+|+++.|..
T Consensus 47 ~v~~~~~~~~~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~N 85 (200)
T 4h08_A 47 YVGRLSNSKSVGDPALIEELAV----VLKNTKFDVIHFNNGLH 85 (200)
T ss_dssp EEEEEEESCCTTCHHHHHHHHH----HHHHSCCSEEEECCCSS
T ss_pred eEEEEeccCCccHHHHHHHHHH----HHhcCCCCeEEEEeeeC
Confidence 3455555556666666555543 34568899999998864
No 47
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=53.40 E-value=17 Score=31.99 Aligned_cols=62 Identities=15% Similarity=0.268 Sum_probs=44.1
Q ss_pred ChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHH---HHhcCCCEEEEeCCCCC
Q psy8693 47 DDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEF---VKRYNLPFLMVGGGGYT 118 (282)
Q Consensus 47 ~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~---~~~~~~~~~~v~eGGY~ 118 (282)
...++.+.|.+.+ |-+++|+-..||+-.|-.++.+. +-...+.+. +++.+.++++|.+||-.
T Consensus 5 ~~~~~~~~~~~a~-pyi~~~~~k~iViKlGGs~l~~~---------~~~~~~~~~i~~l~~~G~~vViVhGgG~~ 69 (299)
T 2ap9_A 5 PTHIKAQVLAEAL-PWLKQLHGKVVVVKYGGNAMTDD---------TLRRAFAADMAFLRNCGIHPVVVHGGGPQ 69 (299)
T ss_dssp CHHHHHHHHHHHH-HHHHHHTTCEEEEEECTHHHHSH---------HHHHHHHHHHHHHHTTTCEEEEEECCSHH
T ss_pred ChhhHHHHHHHHH-HHHHHhCCCeEEEEECchhhCCc---------hHHHHHHHHHHHHHHCCCcEEEEECCcHH
Confidence 4567888898887 78999999999999997776532 233334443 44456788888888754
No 48
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=51.37 E-value=38 Score=29.36 Aligned_cols=75 Identities=16% Similarity=0.071 Sum_probs=44.2
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPF 109 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~ 109 (282)
++|=|=...+=+.+.+..+.+.+..+-+. ..-+||+ ++|.|.-..... .-..+.+..+.+.+..+.+|+
T Consensus 35 tlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~l~~~~kPv 110 (264)
T 3he2_A 35 ELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFA---ADYPDRLIELHKAMDASPMPV 110 (264)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTG---GGHHHHHHHHHHHHHHCSSCE
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhh---HHHHHHHHHHHHHHHhCCCCE
Confidence 45556545666677777777777766555 6778877 456665421110 111234455677778889999
Q ss_pred EEEeCC
Q psy8693 110 LMVGGG 115 (282)
Q Consensus 110 ~~v~eG 115 (282)
|....|
T Consensus 111 IAav~G 116 (264)
T 3he2_A 111 VGAING 116 (264)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 987653
No 49
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=51.19 E-value=34 Score=28.38 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=22.4
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCC-CEEEEecCCC
Q psy8693 38 VNIPLRDGMDDESYESIFVPIISKVMETFQP-SAVVLQCGAD 78 (282)
Q Consensus 38 ~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~P-d~ivv~~G~D 78 (282)
+|..+.-. +-..++.. ..+..++.+.+| |+||++.|..
T Consensus 36 ~N~gi~G~-tt~~~~~~--~r~~~~l~~~~~~d~ViI~~G~N 74 (233)
T 1k7c_A 36 VNDAVAGR-SARSYTRE--GRFENIADVVTAGDYVIVEFGHN 74 (233)
T ss_dssp EECCCTTC-CHHHHHHT--THHHHHHHHCCTTCEEEECCCTT
T ss_pred EecccCCc-cHHHHHHc--ccHHHHHhhCCCCCEEEEEccCC
Confidence 45555433 33344431 134456667777 9999999984
No 50
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=51.02 E-value=74 Score=27.55 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=41.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCH---------HHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTV---------RGHGKCVE 100 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~---------~~~~~~~~ 100 (282)
++|=|=+..+=+.+.+..+.+.+..+-+.-.- +||+ ++|.|.-. +....-.. +.+..+.+
T Consensus 40 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 2f6q_A 40 MFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTN---FTDIPPGGVEEKAKNNAVLLREFVG 115 (280)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC-------CCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHH---HhhcCcchhhHHHHHHHHHHHHHHH
Confidence 45666555666677778888887665444344 6666 45556532 11111011 11233455
Q ss_pred HHHhcCCCEEEEeCC
Q psy8693 101 FVKRYNLPFLMVGGG 115 (282)
Q Consensus 101 ~~~~~~~~~~~v~eG 115 (282)
.+..+.+|+|....|
T Consensus 116 ~l~~~~kPvIAav~G 130 (280)
T 2f6q_A 116 CFIDFPKPLIAVVNG 130 (280)
T ss_dssp HHHSCCSCEEEEECS
T ss_pred HHHcCCCCEEEEECC
Confidence 666789999986653
No 51
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=47.40 E-value=32 Score=29.86 Aligned_cols=59 Identities=14% Similarity=0.303 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHH---HhcCCCEEEEeCCCCC
Q psy8693 50 SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFV---KRYNLPFLMVGGGGYT 118 (282)
Q Consensus 50 ~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~---~~~~~~~~~v~eGGY~ 118 (282)
++.+.|++.+ |-+++|+-..||+-.|--++.+ .+-...+.+.+ ++.+.++++|.+||-.
T Consensus 4 ~~~~~~~~~~-pyi~~~~~~~iViKlGGs~l~~---------~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~ 65 (282)
T 2bty_A 4 DTVNVLLEAL-PYIKEFYGKTFVIKFGGSAMKQ---------ENAKKAFIQDIILLKYTGIKPIIVHGGGPA 65 (282)
T ss_dssp HHHHHHHHHH-HHHHHHTTCEEEEEECSHHHHS---------HHHHHHHHHHHHHHHHTTCEEEEEECCSHH
T ss_pred HHHHHHHHHH-HHHHHhcCCeEEEEECchhhCC---------hhHHHHHHHHHHHHHHCCCcEEEEECCcHH
Confidence 4667788876 8899999999999999777653 23334444443 4456788888888753
No 52
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=47.38 E-value=23 Score=28.83 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=23.4
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
+.|| .|..+.....-.+ .|..++++.+||+|.+|-=
T Consensus 18 s~Ni---~g~~~~~~~~r~~-~i~~~i~~~~pDIi~LQEv 53 (256)
T 4fva_A 18 SWNI---DGLDGRSLLTRMK-AVAHIVKNVNPDILFLQEV 53 (256)
T ss_dssp EEEC---CTTCCTTHHHHHH-HHHHHHHHHCCSEEEEEEE
T ss_pred EEec---CCCCCcCHHHHHH-HHHHHHHHcCCCEEEEEec
Confidence 4566 3444444444443 3457788999999999984
No 53
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=46.99 E-value=21 Score=29.35 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=36.6
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhc--CCCEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRY--NLPFL 110 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~--~~~~~ 110 (282)
.+|..+. |.+-..++..+++ .++..++||+|||..|..=. + .+.+. +..+++.+++. +.+++
T Consensus 68 v~n~g~~-G~t~~~~~~~~~~---~~l~~~~pd~vvi~~G~ND~-----~---~~~~~~~~~l~~~i~~l~~~~p~~~ii 135 (229)
T 1fxw_F 68 ALNFGIG-GDTTRHVLWRLKN---GELENIKPKVIVVWVGTNNH-----E---NTAEEVAGGIEAIVQLINTRQPQAKII 135 (229)
T ss_dssp EEEEECT-TCCHHHHHHHHHT---TTTSSCCCSEEEEECCTTCT-----T---SCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ceeeccC-cchHHHHHHHHHc---CccccCCCCEEEEEEecCCC-----C---CCHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 4666664 3333444443332 12346899999999997433 2 45544 44566666665 45565
Q ss_pred EE
Q psy8693 111 MV 112 (282)
Q Consensus 111 ~v 112 (282)
++
T Consensus 136 l~ 137 (229)
T 1fxw_F 136 VL 137 (229)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 54
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=46.62 E-value=93 Score=26.41 Aligned_cols=75 Identities=12% Similarity=0.045 Sum_probs=41.2
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCCCHHH-----HHHHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNLTVRG-----HGKCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~lt~~~-----~~~~~~~~~~ 104 (282)
++|=|=+..+=+.+.+..+.+.+..+-+.-+..+||+. +|.|.-.- .... ..+. +..+.+.+..
T Consensus 17 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~~~-~~~~~~~~~~~~~~~~l~~ 92 (257)
T 2ej5_A 17 TLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGV---TEEM-DHGDVLRSRYAPMMKALHH 92 (257)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-----------CHHHHHHHTHHHHHHHHHH
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHH---hhcc-chhHHHHHHHHHHHHHHHh
Confidence 34555444455567777777777665554455677774 45554321 1100 1122 3445666777
Q ss_pred cCCCEEEEeCC
Q psy8693 105 YNLPFLMVGGG 115 (282)
Q Consensus 105 ~~~~~~~v~eG 115 (282)
+.+|+|....|
T Consensus 93 ~~kPvIAav~G 103 (257)
T 2ej5_A 93 LEKPVVAAVNG 103 (257)
T ss_dssp CCSCEEEEECS
T ss_pred CCCCEEEEECc
Confidence 89999876643
No 55
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=46.34 E-value=65 Score=26.77 Aligned_cols=22 Identities=5% Similarity=-0.182 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhcCCCEEEEeCC
Q psy8693 94 GHGKCVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~v~eG 115 (282)
.+.++.+.+++++.+.|++..|
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEccC
Confidence 3344455555555555555433
No 56
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=45.02 E-value=89 Score=27.21 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=40.4
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCC---------CHHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNL---------TVRGHGKCVE 100 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~l---------t~~~~~~~~~ 100 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+. +|.|.-.-.....-.- ..+.+..+.+
T Consensus 38 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (290)
T 3sll_A 38 TLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVIL 117 (290)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHH
Confidence 35555444566677777887777665433344566663 4555432111110000 1223344566
Q ss_pred HHHhcCCCEEEEeCC
Q psy8693 101 FVKRYNLPFLMVGGG 115 (282)
Q Consensus 101 ~~~~~~~~~~~v~eG 115 (282)
.+..+.+|+|....|
T Consensus 118 ~l~~~~kPvIAav~G 132 (290)
T 3sll_A 118 TLRRMHQPVIAAING 132 (290)
T ss_dssp HHHHCSSCEEEEECS
T ss_pred HHHhCCCCEEEEECC
Confidence 677789999977653
No 57
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=44.45 E-value=54 Score=29.65 Aligned_cols=60 Identities=18% Similarity=0.293 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcC-CCCCCCHHHHHHHHHH---HHhcCCCEEEEeCCCCC
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL-GCFNLTVRGHGKCVEF---VKRYNLPFLMVGGGGYT 118 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dpl-g~~~lt~~~~~~~~~~---~~~~~~~~~~v~eGGY~ 118 (282)
++...++++++ ..+++.+||+||+ + ||=+ -.-.-+.+.+..+.+. +.+. .|++++ .|-.+
T Consensus 26 ~~~~~~l~~l~-~~~~~~~~D~vli-a------GDl~hd~~~~~~~~~~~~~~~l~~l~~~-~~v~~i-~GNHD 89 (379)
T 3tho_B 26 EELKKALDKVV-EEAEKREVDLILL-T------GDLLHSRNNPSVVALHDLLDYLKRMMRT-APVVVL-PGNQD 89 (379)
T ss_dssp HHHHHHHHHHH-HHHHHHTCSEEEE-C------SCCBSCSSSCCHHHHHHHHHHHHHHHHH-SCEEEC-CCTTS
T ss_pred HHHHHHHHHHH-HHHHhcCCCEEEE-C------CCccccCCCCCHHHHHHHHHHHHHHHhC-CCEEEE-cCCCc
Confidence 45667777766 5677889999987 3 3433 2334455555554444 4444 776665 45433
No 58
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=44.12 E-value=28 Score=27.64 Aligned_cols=17 Identities=24% Similarity=0.469 Sum_probs=14.5
Q ss_pred HHHHHHHcCCCEEEEec
Q psy8693 59 ISKVMETFQPSAVVLQC 75 (282)
Q Consensus 59 l~~~~~~f~Pd~ivv~~ 75 (282)
|...+++.+||+|.+|-
T Consensus 26 i~~~i~~~~pDIi~LQE 42 (250)
T 4f1h_A 26 LCSYLALYTPDVVFLQE 42 (250)
T ss_dssp HHHHHHHHCCSEEEEEE
T ss_pred HHHHHHHcCCCEEEEEe
Confidence 44678899999999997
No 59
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=44.05 E-value=72 Score=29.81 Aligned_cols=48 Identities=13% Similarity=0.230 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHh
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKR 104 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~ 104 (282)
.+....|++++ ..+++.+||+||+ +| |. +-.-.-+.+....+.+.+++
T Consensus 54 ~d~~~~l~~ll-~~~~~~~~D~Vli-aG-Dl-----fd~~~~~~~~~~~~~~~L~r 101 (431)
T 3t1i_A 54 NDTFVTLDEIL-RLAQENEVDFILL-GG-DL-----FHENKPSRKTLHTCLELLRK 101 (431)
T ss_dssp THHHHHHHHHH-HHHHHTTCSEEEE-CS-CC-----BSSSSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHH-HHHhhcCCCEEEE-cC-cc-----ccCCCCCHHHHHHHHHHHHH
Confidence 34556777766 4667899999998 33 43 33334567777777666663
No 60
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=43.80 E-value=16 Score=32.16 Aligned_cols=59 Identities=19% Similarity=0.304 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHH---HHhcCCCEEEEeCCCC
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEF---VKRYNLPFLMVGGGGY 117 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~---~~~~~~~~~~v~eGGY 117 (282)
..+...|++.+ |-+++|+-..||+-.|--++.+ .+-...+.+. +++.+.++++|.+||-
T Consensus 18 ~~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~---------~~~~~~~~~~i~~l~~~G~~vViVhGgG~ 79 (298)
T 2rd5_A 18 DYRVEILSESL-PFIQKFRGKTIVVKYGGAAMTS---------PELKSSVVSDLVLLACVGLRPILVHGGGP 79 (298)
T ss_dssp CHHHHHHHHTH-HHHHHTTTCEEEEEECTHHHHC---------HHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred HHHHHHHHHHH-HHHHHhcCCEEEEEECchhhCC---------hhHHHHHHHHHHHHHHCCCCEEEEECCcH
Confidence 46788898876 7899999999999999777653 2233344444 4445778888888864
No 61
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=43.31 E-value=12 Score=27.51 Aligned_cols=54 Identities=15% Similarity=0.310 Sum_probs=43.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCC----HHHHHHHHHHHHhcCCCE
Q psy8693 56 VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLT----VRGHGKCVEFVKRYNLPF 109 (282)
Q Consensus 56 ~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt----~~~~~~~~~~~~~~~~~~ 109 (282)
+.+|..++++|.-++=|++++.|...+.++|.|-+. .+...+..+.+++.+..+
T Consensus 37 ~pvis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 94 (100)
T 2qsw_A 37 LPIISHIVQEYQVEVSIIQGNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRKLRVET 94 (100)
T ss_dssp SCHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred chHHHHHHHHhCCCEEEEEeeceEcCCeeEEEEEEEEECCHHHHHHHHHHHHHcCCEE
Confidence 356677788999999999999999999999998663 455777788888877644
No 62
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=43.24 E-value=52 Score=28.22 Aligned_cols=78 Identities=9% Similarity=-0.015 Sum_probs=42.5
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCC-CCCCHH-------HHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGC-FNLTVR-------GHGKCVEF 101 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~-~~lt~~-------~~~~~~~~ 101 (282)
++|=|=. .+=+.+.+..+.+.+..+-+.-..-+||+ ++|.|.-.-..... ..-+.+ .+..+.+.
T Consensus 21 tlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (263)
T 3l3s_A 21 TLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLD 99 (263)
T ss_dssp EECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHH
Confidence 4455544 55567777888787765543333456665 56777644322100 001122 23345566
Q ss_pred HHhcCCCEEEEeCC
Q psy8693 102 VKRYNLPFLMVGGG 115 (282)
Q Consensus 102 ~~~~~~~~~~v~eG 115 (282)
+..+.+|+|....|
T Consensus 100 l~~~~kPvIAav~G 113 (263)
T 3l3s_A 100 LAHCPKPTIALVEG 113 (263)
T ss_dssp HHTCSSCEEEEESS
T ss_pred HHhCCCCEEEEECC
Confidence 77789999887653
No 63
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=43.03 E-value=67 Score=30.68 Aligned_cols=56 Identities=11% Similarity=0.205 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC-CCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCG-ADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIR 120 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G-~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~ 120 (282)
.+.+.|..+++.|+|++|+|... .-...+|.+. .+.+.+.. +.||+.+---||...
T Consensus 72 kL~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~----------~v~~~~~~-~~pVi~v~tpgf~g~ 128 (525)
T 3aek_B 72 LLKDALAAAHARYKPQAMAVALTCTAELLQDDPN----------GISRALNL-PVPVVPLELPSYSRK 128 (525)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHH----------HHHHHHTC-SSCEEECCCCTTTCC
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHhcccHH----------HHHHHhcC-CCCEEEEECCCcCCc
Confidence 55667777888999997766654 5666666432 22333333 667777777777653
No 64
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=41.23 E-value=18 Score=29.59 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=31.1
Q ss_pred cCCCEEEEecCC-CCCCCCcCCCCCC-C----HHHHHHHHHHHHhc--CCCEEEEe
Q psy8693 66 FQPSAVVLQCGA-DSLTGDRLGCFNL-T----VRGHGKCVEFVKRY--NLPFLMVG 113 (282)
Q Consensus 66 f~Pd~ivv~~G~-D~~~~Dplg~~~l-t----~~~~~~~~~~~~~~--~~~~~~v~ 113 (282)
.+||+|+++.|. |...+-+.+.+.- + .+.+.++++.+++. +.+++++.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~ 136 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFIS 136 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 499999999997 3444444444321 1 13677788888876 67777653
No 65
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=40.78 E-value=33 Score=27.71 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=19.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy8693 45 GMDDESYESIFVPIISKVMETFQPSAVVLQC 75 (282)
Q Consensus 45 g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~ 75 (282)
|........-++. |...+++.+||+|.+|-
T Consensus 19 g~~~~~~~~r~~~-i~~~i~~~~pDIi~LQE 48 (256)
T 4gz1_A 19 GLDGCNLPERARG-VCSCLALYSPDVVFLQE 48 (256)
T ss_dssp TTCCTTHHHHHHH-HHHHHHHHCCSEEEEEE
T ss_pred CCcCcCHHHHHHH-HHHHHHHcCCCEEEEEc
Confidence 3333334344443 44678899999999996
No 66
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=40.14 E-value=14 Score=27.06 Aligned_cols=68 Identities=15% Similarity=0.338 Sum_probs=50.7
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCC----HHHHHHHHHHHHhcCCCEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLT----VRGHGKCVEFVKRYNLPFLM 111 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt----~~~~~~~~~~~~~~~~~~~~ 111 (282)
.+-+-++....+ +.+|..++++|.-++=|++++.|...+.++|.|-+. .+...+..+.+++.+..+=.
T Consensus 25 lv~l~f~g~~~~-------~pvis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~vEv 96 (101)
T 2qrr_A 25 LVRMEFTGATVD-------APLMSQISRKYNIDVSILSSDLDYAGGVKFGMMVAELFGNEQDDSAAIEYLRENNVKVEV 96 (101)
T ss_dssp EEEEEECTTSCS-------SCHHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEcCCCcC-------chHHHHHHHHhCCCEEEEEeeeeEcCCeeEEEEEEEEeCCHHHHHHHHHHHHHcCCEEEE
Confidence 455555554443 356677788999999999999999999999988663 45567778888887764433
No 67
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=40.12 E-value=99 Score=27.75 Aligned_cols=80 Identities=16% Similarity=0.166 Sum_probs=49.8
Q ss_pred CcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcC--CCEEEEecCCCCCCCCcCCCCCCCH----HHHHHHHHHHHhcC
Q psy8693 33 GKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQ--PSAVVLQCGADSLTGDRLGCFNLTV----RGHGKCVEFVKRYN 106 (282)
Q Consensus 33 g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~--Pd~ivv~~G~D~~~~Dplg~~~lt~----~~~~~~~~~~~~~~ 106 (282)
|-.-.+++.-..+.++..+...+.+.+..++++|+ |+.|++..+ ..|.+. .+. +.|.++.+.|++.+
T Consensus 100 GiyVIlDlH~~~g~~~~~~~~~~~~~w~~iA~ryk~~~~~Vi~el~-----NEP~~~--~~~~~w~~~~~~~i~~IR~~d 172 (345)
T 3jug_A 100 KMVAVVEVHDATGRDSRSDLDRAVDYWIEMKDALIGKEDTVIINIA-----NEWYGS--WDGAAWADGYIDVIPKLRDAG 172 (345)
T ss_dssp TCEEEEEECTTTTCCCHHHHHHHHHHHHHTHHHHTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHcCCCCeEEEEec-----CCCCCC--CCHHHHHHHHHHHHHHHHhhC
Confidence 33444555554454445567777777788888885 456777766 777763 344 34456677778774
Q ss_pred C-CEEEEeCCCCCc
Q psy8693 107 L-PFLMVGGGGYTI 119 (282)
Q Consensus 107 ~-~~~~v~eGGY~~ 119 (282)
. .+|+|.+-+|+-
T Consensus 173 p~~~Iiv~g~~w~~ 186 (345)
T 3jug_A 173 LTHTLMVDAAGWGQ 186 (345)
T ss_dssp CCSCEEEECBTTTT
T ss_pred CCCEEEEeCCCccc
Confidence 3 456666667764
No 68
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=38.85 E-value=48 Score=27.25 Aligned_cols=47 Identities=17% Similarity=0.264 Sum_probs=30.4
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCC---CEEEEeCCCCC
Q psy8693 61 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNL---PFLMVGGGGYT 118 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~---~~~~v~eGGY~ 118 (282)
..+++.+||+|.+|+-.. -+.....++.+.+++.+. ..++++|.+-+
T Consensus 133 ~~~~~~~~d~v~lS~~~~-----------~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~ 182 (210)
T 1y80_A 133 EAVKKYQPDIVGMSALLT-----------TTMMNMKSTIDALIAAGLRDRVKVIVGGAPLS 182 (210)
T ss_dssp HHHHHHCCSEEEEECCSG-----------GGTHHHHHHHHHHHHTTCGGGCEEEEESTTCC
T ss_pred HHHHHcCCCEEEEecccc-----------ccHHHHHHHHHHHHhcCCCCCCeEEEECCCCC
Confidence 556788999999998532 135567778888887643 23444444433
No 69
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=38.77 E-value=97 Score=26.47 Aligned_cols=78 Identities=15% Similarity=0.071 Sum_probs=40.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCc-CCCCCC------CHHHHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDR-LGCFNL------TVRGHGKCVEFV 102 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dp-lg~~~l------t~~~~~~~~~~~ 102 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+ ++|.|.-.-.. ...-.. ..+.+..+.+.+
T Consensus 25 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 104 (267)
T 3oc7_A 25 TLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAI 104 (267)
T ss_dssp EECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHH
Confidence 3444444455566777778788766554444456665 56666543210 000000 122334456667
Q ss_pred HhcCCCEEEEeC
Q psy8693 103 KRYNLPFLMVGG 114 (282)
Q Consensus 103 ~~~~~~~~~v~e 114 (282)
..+.+|+|....
T Consensus 105 ~~~~kPvIAav~ 116 (267)
T 3oc7_A 105 VESRLPVIAAID 116 (267)
T ss_dssp HHCSSCEEEEEC
T ss_pred HhCCCCEEEEEc
Confidence 778999987653
No 70
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=38.41 E-value=1.5e+02 Score=25.50 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=42.4
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCC--CcCCCC-CC---CHHHHHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTG--DRLGCF-NL---TVRGHGKCVEFVK 103 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~--Dplg~~-~l---t~~~~~~~~~~~~ 103 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-.--+||+ ++|.|.-.- ++.+.. .. -.+.+..+.+.+.
T Consensus 29 tlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 108 (274)
T 4fzw_C 29 TLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLA 108 (274)
T ss_dssp EECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHH
T ss_pred EEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHH
Confidence 4565544455566777778787766544434446666 355554321 111110 00 0122445667778
Q ss_pred hcCCCEEEEeCC
Q psy8693 104 RYNLPFLMVGGG 115 (282)
Q Consensus 104 ~~~~~~~~v~eG 115 (282)
.+.+|+|....|
T Consensus 109 ~~~kPvIAav~G 120 (274)
T 4fzw_C 109 KLPKPVICAVNG 120 (274)
T ss_dssp HCSSCEEEEECS
T ss_pred HCCCCEEEEECC
Confidence 889999987654
No 71
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=37.74 E-value=74 Score=26.96 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=43.3
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCCCH----HHHHHHHHHHHhc
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNLTV----RGHGKCVEFVKRY 105 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~lt~----~~~~~~~~~~~~~ 105 (282)
++|=|=+..+=+.+.+..+.+.+..+-+.-.--+||+. +|.|.-.- +...-.. +.+..+.+.+..+
T Consensus 14 tlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~~l~~~ 90 (254)
T 3hrx_A 14 TLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEF---GDRKPDYEAHLRRYNRVVEALSGL 90 (254)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGT---TTSCCCHHHHTHHHHHHHHHHHTC
T ss_pred EEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHh---cccchhhHHHHHHHHHHHHHHHhC
Confidence 34555444555667777787888765554444567764 44443321 1111122 2344556677778
Q ss_pred CCCEEEEeCC
Q psy8693 106 NLPFLMVGGG 115 (282)
Q Consensus 106 ~~~~~~v~eG 115 (282)
.+|+|....|
T Consensus 91 ~kPvIAav~G 100 (254)
T 3hrx_A 91 EKPLVVAVNG 100 (254)
T ss_dssp SSCEEEEECS
T ss_pred CCCEEEEECC
Confidence 9999987754
No 72
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=37.73 E-value=23 Score=26.25 Aligned_cols=52 Identities=13% Similarity=0.316 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCC----CHHHHHHHHHHHHhcCCC
Q psy8693 57 PIISKVMETFQPSAVVLQCGADSLTGDRLGCFNL----TVRGHGKCVEFVKRYNLP 108 (282)
Q Consensus 57 ~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~l----t~~~~~~~~~~~~~~~~~ 108 (282)
.+|..++++|+-++=|++++.|...+.++|.|-+ +.+...+..+.+++.+..
T Consensus 36 PiIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~ 91 (106)
T 3dhx_A 36 PLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVK 91 (106)
T ss_dssp CHHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHCCCEEEEEEEeEEECCeeEEEEEEEEeCCHHHHHHHHHHHHHCCCE
Confidence 4677778899999999999999999999998755 355677788888887654
No 73
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=37.67 E-value=1.1e+02 Score=28.37 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHh
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKR 104 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~ 104 (282)
.+...+|++++ ..+.+.+||+||++ ||=+-.-.-+.+....+.+.+++
T Consensus 35 ~d~~~~l~~lv-~~~~~~~~D~Vlia-------GDLfd~~~p~~~~~~~~~~~lr~ 82 (417)
T 4fbw_A 35 NDSFVSFNEIL-EIARERDVDMILLG-------GDIFHDNKPSRKALYQALRSLRL 82 (417)
T ss_dssp THHHHHHHHHH-HHHHHTTCSEEEEC-------SCCBSSSSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHH-HHHHhcCCCEEEEc-------CccccCCCCCHHHHHHHHHHHHH
Confidence 34556777777 45667899999973 45444455677777777766655
No 74
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=37.36 E-value=1.3e+02 Score=25.64 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=48.4
Q ss_pred CcccEEeecCCCCCChhHHHHHHHHHHHHHHHHcC--CCEEEEecCCCCCCCCcCCCCCCCH----HHHHHHHHHHHhcC
Q psy8693 33 GKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQ--PSAVVLQCGADSLTGDRLGCFNLTV----RGHGKCVEFVKRYN 106 (282)
Q Consensus 33 g~g~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~--Pd~ivv~~G~D~~~~Dplg~~~lt~----~~~~~~~~~~~~~~ 106 (282)
|-.-.+++.-..+.........+.+.+..++++|+ |+.|++..+ ..|.+. .+. +.|.++.+.+|+.+
T Consensus 77 Gi~Vild~H~~~~~~~~~~~~~~~~~w~~ia~~y~~~~~~v~~el~-----NEP~~~--~~~~~~~~~~~~~~~~IR~~d 149 (294)
T 2whl_A 77 KMVAVVEVHDATGRDSRSDLNRAVDYWIEMKDALIGKEDTVIINIA-----NEWYGS--WDGSAWADGYIDVIPKLRDAG 149 (294)
T ss_dssp TCEEEEEECTTTTCCCHHHHHHHHHHHHHTHHHHTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeccCCCCCcchhHHHHHHHHHHHHHHHcCCCCeEEEEec-----CCCCCC--CChHHHHHHHHHHHHHHHhcC
Confidence 33445555544444444566777777778888886 455566555 667664 343 45666788888874
Q ss_pred C-CEEEEeCCCCCc
Q psy8693 107 L-PFLMVGGGGYTI 119 (282)
Q Consensus 107 ~-~~~~v~eGGY~~ 119 (282)
. .+|++.+.+++.
T Consensus 150 ~~~~i~v~~~~~~~ 163 (294)
T 2whl_A 150 LTHTLMVDAAGWGQ 163 (294)
T ss_dssp CCSCEEEECBTTTT
T ss_pred CCcEEEEcCCCCCC
Confidence 3 455565555653
No 75
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=36.23 E-value=35 Score=30.44 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHH---HHhcCCCEEEEeCCCC
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEF---VKRYNLPFLMVGGGGY 117 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~---~~~~~~~~~~v~eGGY 117 (282)
.++...|++.+ |-+++|+-..|||-.|--++.+ .+-...+.+. +++.+.++++|.+||-
T Consensus 31 ~~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~---------~~~~~~l~~~i~~l~~~G~~vVlVhGgG~ 92 (321)
T 2v5h_A 31 ADRVRILSEAL-PYLQQFAGRTVVVKYGGAAMKQ---------EELKEAVMRDIVFLACVGMRPVVVHGGGP 92 (321)
T ss_dssp CCHHHHHHHTH-HHHHHTTTCEEEEEECTHHHHS---------HHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred hhHHHHHHHHH-HHHHHhCCCeEEEEECchhhCC---------chHHHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 36788898876 8899999999999999777654 1223334333 4455778888988864
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=35.60 E-value=79 Score=26.49 Aligned_cols=77 Identities=13% Similarity=0.048 Sum_probs=40.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCC--CCCCHHHHHHHHHHHHhcCC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGC--FNLTVRGHGKCVEFVKRYNL 107 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~--~~lt~~~~~~~~~~~~~~~~ 107 (282)
++|=| +..+=+.+.+..+.+.+..+-+. .-.+||+ ++|.|.-.-..... ..-..+.+..+.+.+..+.+
T Consensus 19 tlnrp-~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 96 (233)
T 3r6h_A 19 RMDDG-KVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPK 96 (233)
T ss_dssp EECCS-SSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHTCSS
T ss_pred EECCC-CCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHhCCC
Confidence 45555 44555677778888888766555 4556665 44555322111000 00001122345566777899
Q ss_pred CEEEEeCC
Q psy8693 108 PFLMVGGG 115 (282)
Q Consensus 108 ~~~~v~eG 115 (282)
|+|....|
T Consensus 97 PvIAav~G 104 (233)
T 3r6h_A 97 PVVIACTG 104 (233)
T ss_dssp CEEEEECS
T ss_pred CEEEEECC
Confidence 99987553
No 77
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=35.59 E-value=56 Score=27.85 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=45.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCC---cCCCCCCCHHHHHHHHHHHHhcC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGD---RLGCFNLTVRGHGKCVEFVKRYN 106 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~D---plg~~~lt~~~~~~~~~~~~~~~ 106 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+ ++|.|...-. .-....-..+.+..+.+.+..+.
T Consensus 20 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (256)
T 3qmj_A 20 TLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFP 99 (256)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCC
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCC
Confidence 3455544455566777788888876555444456665 4566632110 00011112344567788888999
Q ss_pred CCEEEEeCC
Q psy8693 107 LPFLMVGGG 115 (282)
Q Consensus 107 ~~~~~v~eG 115 (282)
+|+|....|
T Consensus 100 kPvIAav~G 108 (256)
T 3qmj_A 100 KPLICAVNG 108 (256)
T ss_dssp SCEEEEECS
T ss_pred CCEEEEECC
Confidence 999876544
No 78
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=35.48 E-value=59 Score=27.68 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=39.1
Q ss_pred CCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc---CCCEEEEeCCCCCc
Q psy8693 67 QPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY---NLPFLMVGGGGYTI 119 (282)
Q Consensus 67 ~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~---~~~~~~v~eGGY~~ 119 (282)
++..||+-.|--++.++ +...++.+-...+.+.++++ +.++++|.+||--.
T Consensus 11 ~~~~iViKiGGs~l~~~--~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~ 64 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQ--TGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIF 64 (255)
T ss_dssp BCSEEEEEECGGGTSCS--SSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTC
T ss_pred cCCEEEEEECHHHhCCC--CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHH
Confidence 56889999998888765 44568888888888877653 56788888887543
No 79
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=34.63 E-value=16 Score=32.50 Aligned_cols=47 Identities=19% Similarity=0.153 Sum_probs=28.7
Q ss_pred HcCCCEEEEecCC-CCCCCCcCCCCCCCHHHHHHHHHHHHhc--CCCEEEEe
Q psy8693 65 TFQPSAVVLQCGA-DSLTGDRLGCFNLTVRGHGKCVEFVKRY--NLPFLMVG 113 (282)
Q Consensus 65 ~f~Pd~ivv~~G~-D~~~~Dplg~~~lt~~~~~~~~~~~~~~--~~~~~~v~ 113 (282)
.++||+|||..|. |.....+. ..--.+.|..+++.+++. +.+|+++.
T Consensus 211 ~~~PdlVvI~lGtND~~~~~~~--~~~~~~~l~~li~~ir~~~p~a~Iil~~ 260 (341)
T 2wao_A 211 KYVPQVVVINLGTNDFSTSFAD--KTKFVTAYKNLISEVRRNYPDAHIFCCV 260 (341)
T ss_dssp GCCCSEEEEECCHHHHSSSCCC--HHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCCCEEEEeCccccCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 6899999999997 33332210 011135666777777765 45666554
No 80
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=34.62 E-value=44 Score=25.88 Aligned_cols=35 Identities=20% Similarity=0.440 Sum_probs=21.3
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 223 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 223 ~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
+|.... |.+..+.+..+++ .+.+++||+|+|+.|.
T Consensus 42 ~n~g~~-G~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ 76 (185)
T 3hp4_A 42 INASIS-GETSGGALRRLDA----LLEQYEPTHVLIELGA 76 (185)
T ss_dssp EECCCT-TCCHHHHHHHHHH----HHHHHCCSEEEEECCH
T ss_pred EECCcC-CccHHHHHHHHHH----HHhhcCCCEEEEEeec
Confidence 444443 2334445554443 4456899999999995
No 81
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=34.37 E-value=1.9e+02 Score=26.71 Aligned_cols=69 Identities=7% Similarity=0.071 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCEEEEecC-CCCCCCCcCCCCCCCHHHHHHHHHHHH-hcCCCEEEEeCCCCCcChhHHHHHHHHHH
Q psy8693 55 FVPIISKVMETFQPSAVVLQCG-ADSLTGDRLGCFNLTVRGHGKCVEFVK-RYNLPFLMVGGGGYTIRNVSRCWTYETSV 132 (282)
Q Consensus 55 ~~~~l~~~~~~f~Pd~ivv~~G-~D~~~~Dplg~~~lt~~~~~~~~~~~~-~~~~~~~~v~eGGY~~~~~~~~~~~~~~~ 132 (282)
+.+.|..+.++|+|++|+|... .-.+.+|. +..+.+.+. +.+.||+.+--.||... ....+.....+
T Consensus 85 L~~~i~~~~~~~~P~~I~v~~TC~~~iIGdD----------i~~v~~~~~~~~~ipVi~v~~~Gf~~~-~~~G~~~a~~a 153 (460)
T 2xdq_A 85 LKRLCLEIKRDRNPSVIVWIGTCTTEIIKMD----------LEGLAPKLEAEIGIPIVVARANGLDYA-FTQGEDTVLAA 153 (460)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECHHHHHTTCC----------HHHHHHHHHHHHSSCEEEEECCTTTCC-TTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCHHHHHhhC----------HHHHHHHHhhccCCcEEEEecCCcccc-HHHHHHHHHHH
Confidence 5677778889999999887654 23333442 344555554 45899999999999753 44444444444
Q ss_pred Hc
Q psy8693 133 AL 134 (282)
Q Consensus 133 ~~ 134 (282)
++
T Consensus 154 l~ 155 (460)
T 2xdq_A 154 MA 155 (460)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 82
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=34.31 E-value=44 Score=28.07 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=7.0
Q ss_pred HHHHHHcCCCEEEE
Q psy8693 60 SKVMETFQPSAVVL 73 (282)
Q Consensus 60 ~~~~~~f~Pd~ivv 73 (282)
..++++++||+|+.
T Consensus 88 ~~~ir~~~P~~V~t 101 (227)
T 1uan_A 88 AQALRRLRPRVVFA 101 (227)
T ss_dssp HHHHHHHCEEEEEE
T ss_pred HHHHHHhCCCEEEe
Confidence 34445555555554
No 83
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=34.17 E-value=73 Score=27.40 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=42.4
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHHH-------HHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVRG-------HGKCVEFV 102 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~~-------~~~~~~~~ 102 (282)
++|-|=+...=+.+.+..+.+.+..+-+.-+..+||+ ++|.|.-.- ... -+.+. +..+.+.+
T Consensus 38 tLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~---~~~-~~~~~~~~~~~~~~~~~~~l 113 (263)
T 2j5g_A 38 RMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSL---GDV-TNPREWDKTYWEGKKVLQNL 113 (263)
T ss_dssp EECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGG---CCT-TSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHH---hcc-CCHHHHHHHHHHHHHHHHHH
Confidence 4555544444456677777777766555445567776 567775321 111 02211 12345566
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 114 ~~~~kPvIAav~G 126 (263)
T 2j5g_A 114 LDIEVPVISAVNG 126 (263)
T ss_dssp HTCCSCEEEEECS
T ss_pred HhCCCCEEEEECC
Confidence 6788999987664
No 84
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=34.10 E-value=1.1e+02 Score=26.01 Aligned_cols=77 Identities=16% Similarity=0.082 Sum_probs=39.9
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhc
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRY 105 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~ 105 (282)
++|-|=. .+=+.+.+..+.+.+..+-+.-.--+||+ ++|.|.-.-.....-. .... +..+.+.+..+
T Consensus 20 tlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 97 (261)
T 3pea_A 20 TLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAK-QATELAQLGQVTFERVEKC 97 (261)
T ss_dssp EECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHH-HHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchh-HHHHHHHHHHHHHHHHHhC
Confidence 3454444 55566777777777766544444456766 3455543221111000 0011 22345566778
Q ss_pred CCCEEEEeCC
Q psy8693 106 NLPFLMVGGG 115 (282)
Q Consensus 106 ~~~~~~v~eG 115 (282)
.+|+|....|
T Consensus 98 ~kPvIAav~G 107 (261)
T 3pea_A 98 SKPVIAAIHG 107 (261)
T ss_dssp SSCEEEEECS
T ss_pred CCCEEEEECC
Confidence 9999876643
No 85
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=33.99 E-value=1.4e+02 Score=25.96 Aligned_cols=57 Identities=23% Similarity=0.377 Sum_probs=37.5
Q ss_pred CChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Q psy8693 46 MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 46 ~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eG 115 (282)
++-++-..+. +.+..+.++|+||++|+.+= - -...|=...-+.+++.+.|++++.-|
T Consensus 44 m~pe~~~~~~-~~~~~~~~~~~pDfvI~isP--------N----~a~PGP~~ARE~l~~~~iP~IvI~D~ 100 (283)
T 1qv9_A 44 MDPECVEAAV-EMALDIAEDFEPDFIVYGGP--------N----PAAPGPSKAREMLADSEYPAVIIGDA 100 (283)
T ss_dssp CSHHHHHHHH-HHHHHHHHHHCCSEEEEECS--------C----TTSHHHHHHHHHHHTSSSCEEEEEEG
T ss_pred CCHHHHHHHH-HHhhhhhhhcCCCEEEEECC--------C----CCCCCchHHHHHHHhCCCCEEEEcCC
Confidence 4444444443 33335679999999998753 2 23445556666778889999988754
No 86
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=33.91 E-value=33 Score=28.88 Aligned_cols=26 Identities=15% Similarity=0.309 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 237 ESIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 237 ~~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
...+++.+...+++++||+||+ |||-
T Consensus 71 r~~~d~~~~~~l~~~~~Dliv~-agy~ 96 (209)
T 4ds3_A 71 KEAHEDAILAALDVLKPDIICL-AGYM 96 (209)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEE-SSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEE-eccc
Confidence 3455667778889999998765 5663
No 87
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=33.91 E-value=1e+02 Score=29.15 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCC-CCCCCCcCCCCCCCHHHHHHHHHHHH-hcCCCEEEEeCCCCCcCh
Q psy8693 55 FVPIISKVMETFQPSAVVLQCGA-DSLTGDRLGCFNLTVRGHGKCVEFVK-RYNLPFLMVGGGGYTIRN 121 (282)
Q Consensus 55 ~~~~l~~~~~~f~Pd~ivv~~G~-D~~~~Dplg~~~lt~~~~~~~~~~~~-~~~~~~~~v~eGGY~~~~ 121 (282)
+.+.|..+.+.|+|++|+|...+ -...+|.+ ..+.+.+. +.+.||+.+--.||....
T Consensus 76 L~~~I~~~~~~~~P~~I~V~tTC~~e~IGdDi----------~~v~~~~~~~~g~pVi~v~tpgf~g~~ 134 (511)
T 2xdq_B 76 VVDNIIRKDTEEHPDLIVLTPTCTSSILQEDL----------QNFVRRASLSTTADVLLADVNHYRVNE 134 (511)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCHHHHTTCCCH----------HHHHHHHHHHCSSEEEECCCCTTTCCH
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcHHHHhccCH----------HHHHHHhhhccCCCEEEeeCCCcccch
Confidence 34455567779999999988776 55666643 23334433 458899999999997653
No 88
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=33.41 E-value=34 Score=29.09 Aligned_cols=26 Identities=12% Similarity=0.227 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 238 SIFVPIISKVMETFQPSAVVLQCGADS 264 (282)
Q Consensus 238 ~~~~~~~~~~~~~f~P~~ivvsaG~D~ 264 (282)
+.+++.+...+++++||+|| .|||--
T Consensus 87 ~~~~~~~~~~l~~~~~Dliv-~agy~~ 112 (229)
T 3auf_A 87 TAFDAALAERLQAYGVDLVC-LAGYMR 112 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-ESSCCS
T ss_pred hhccHHHHHHHHhcCCCEEE-EcChhH
Confidence 45666677888999999765 457643
No 89
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.27 E-value=34 Score=28.89 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 237 ESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 237 ~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
+..+++.+...+++++||+||+ |||
T Consensus 74 r~~~d~~~~~~l~~~~~Dlivl-agy 98 (215)
T 3da8_A 74 RDAWDVAITAATAAHEPDLVVS-AGF 98 (215)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE-EEC
T ss_pred hhhhhHHHHHHHHhhCCCEEEE-cCc
Confidence 3455667788889999998776 455
No 90
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=32.96 E-value=1.1e+02 Score=27.73 Aligned_cols=62 Identities=21% Similarity=0.348 Sum_probs=35.3
Q ss_pred cEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Q psy8693 36 YAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 36 ~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eG 115 (282)
+.+|+ ..++-.+..-.++. -+.+++++++||+|++.- |+...+ . ....+..++|+ +..++
T Consensus 66 ~~l~~--~~~~~~~~~~~~~~-~l~~~l~~~kPD~Vlv~g-------d~~~~~-------a--alaA~~~~IPv-~h~ea 125 (385)
T 4hwg_A 66 YFLEV--AADNTAKSIGLVIE-KVDEVLEKEKPDAVLFYG-------DTNSCL-------S--AIAAKRRKIPI-FHMEA 125 (385)
T ss_dssp EECCC--CCCCSHHHHHHHHH-HHHHHHHHHCCSEEEEES-------CSGGGG-------G--HHHHHHTTCCE-EEESC
T ss_pred eecCC--CCCCHHHHHHHHHH-HHHHHHHhcCCcEEEEEC-------CchHHH-------H--HHHHHHhCCCE-EEEeC
Confidence 34444 33333444444554 456889999999999873 322211 1 22334568996 45677
Q ss_pred CC
Q psy8693 116 GY 117 (282)
Q Consensus 116 GY 117 (282)
|-
T Consensus 126 gl 127 (385)
T 4hwg_A 126 GN 127 (385)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 91
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=32.65 E-value=36 Score=28.55 Aligned_cols=27 Identities=15% Similarity=0.054 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 237 ESIFVPIISKVMETFQPSAVVLQCGADS 264 (282)
Q Consensus 237 ~~~~~~~~~~~~~~f~P~~ivvsaG~D~ 264 (282)
++.+++.+...+++++||+|| +|||--
T Consensus 65 r~~~~~~~~~~l~~~~~Dliv-~a~y~~ 91 (216)
T 2ywr_A 65 KKEFEERMALELKKKGVELVV-LAGFMR 91 (216)
T ss_dssp HHHHHHHHHHHHHHTTCCEEE-ESSCCS
T ss_pred hhhhhHHHHHHHHhcCCCEEE-EeCchh
Confidence 456666677888999999865 667743
No 92
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=32.58 E-value=41 Score=28.18 Aligned_cols=24 Identities=33% Similarity=0.371 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 239 IFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 239 ~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
.+++.+...+++++||+||+ |||-
T Consensus 66 ~~~~~~~~~l~~~~~Dliv~-a~y~ 89 (209)
T 1meo_A 66 EFDSAIDLVLEEFSIDIVCL-AGFM 89 (209)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ESCC
T ss_pred hhhHHHHHHHHhcCCCEEEE-cchh
Confidence 44555677889999998654 5664
No 93
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=32.54 E-value=73 Score=29.48 Aligned_cols=71 Identities=14% Similarity=0.029 Sum_probs=54.7
Q ss_pred CCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHH----HHHHHHHHHHhcCCCEEEEeC
Q psy8693 44 DGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVR----GHGKCVEFVKRYNLPFLMVGG 114 (282)
Q Consensus 44 ~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~----~~~~~~~~~~~~~~~~~~v~e 114 (282)
...+.+.+++..+.++..=+++...+.|++-.|-.....|.+|.+...++ |+..+++.+++.+.++-+=.+
T Consensus 24 ~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~ 98 (417)
T 1szn_A 24 CDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYST 98 (417)
T ss_dssp TCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeC
Confidence 35667777777766655555788999999999998888888998877655 899999999998877543333
No 94
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=32.42 E-value=64 Score=27.43 Aligned_cols=11 Identities=9% Similarity=-0.127 Sum_probs=7.8
Q ss_pred CCeEEEEcCCC
Q psy8693 6 TNANFIVNDRD 16 (282)
Q Consensus 6 p~v~~~s~h~~ 16 (282)
.+|+.++-|.+
T Consensus 4 ~~vL~v~aHPD 14 (242)
T 2ixd_A 4 LHILAFGAHAD 14 (242)
T ss_dssp CSEEEEESSTT
T ss_pred ccEEEEEeCCC
Confidence 46777777765
No 95
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=32.41 E-value=37 Score=28.44 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 238 SIFVPIISKVMETFQPSAVVLQCGADS 264 (282)
Q Consensus 238 ~~~~~~~~~~~~~f~P~~ivvsaG~D~ 264 (282)
+.+++.+...+++++||+||+ |||--
T Consensus 68 ~~~~~~~~~~l~~~~~Dliv~-a~y~~ 93 (212)
T 3av3_A 68 AAFESEILRELKGRQIDWIAL-AGYMR 93 (212)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE-SSCCS
T ss_pred hhhHHHHHHHHHhcCCCEEEE-chhhh
Confidence 455666778889999998665 67743
No 96
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=32.20 E-value=37 Score=28.58 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 238 SIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 238 ~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
+.+++.+...+++++||+||+ |||-
T Consensus 67 ~~~d~~~~~~l~~~~~Dliv~-agy~ 91 (211)
T 3p9x_A 67 EAYEIEVVQQLKEKQIDFVVL-AGYM 91 (211)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE-SSCC
T ss_pred hhhHHHHHHHHHhcCCCEEEE-eCch
Confidence 455666778889999998765 5664
No 97
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.97 E-value=33 Score=28.79 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 238 SIFVPIISKVMETFQPSAVVLQCGADS 264 (282)
Q Consensus 238 ~~~~~~~~~~~~~f~P~~ivvsaG~D~ 264 (282)
+.+++.+...+++++||+|| +|||--
T Consensus 65 ~~~~~~~~~~l~~~~~Dliv-~agy~~ 90 (212)
T 1jkx_A 65 EAYDRELIHEIDMYAPDVVV-LAGFMR 90 (212)
T ss_dssp HHHHHHHHHHHGGGCCSEEE-ESSCCS
T ss_pred hhccHHHHHHHHhcCCCEEE-EeChhh
Confidence 45666677888999999765 457743
No 98
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=31.25 E-value=64 Score=25.55 Aligned_cols=35 Identities=0% Similarity=-0.122 Sum_probs=25.9
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcC
Q psy8693 61 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYN 106 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~ 106 (282)
..+.+++||+|.+|+=.. -+......+.+.+++.+
T Consensus 63 ~aa~~~~~diV~lS~~~~-----------~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 63 MAAVQEDVDVIGVSILNG-----------AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHTTCSEEEEEESSS-----------CHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCEEEEEeech-----------hhHHHHHHHHHHHHhcC
Confidence 567789999999998532 24566777888888864
No 99
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=31.18 E-value=1.6e+02 Score=27.85 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHh
Q psy8693 50 SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKR 104 (282)
Q Consensus 50 ~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~ 104 (282)
+...+|++++. .+.+.+||+||+. ||=+-.-.-+.+....+.+.+++
T Consensus 99 d~~~~l~~lv~-~~~~~~~D~Vlia-------GDLfd~~~ps~~a~~~~~~~Lr~ 145 (472)
T 4fbk_A 99 DSFVSFNEILE-IARERDVDMILLG-------GDIFHDNKPSRKALYQALRSLRL 145 (472)
T ss_dssp HHHHHHHHHHH-HHHHTTCSEEEEC-------SCSBSSSSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-HHHhcCCCEEEEc-------CccccCCCCCHHHHHHHHHHHHH
Confidence 45567877774 5667999999973 45444455677777777776654
No 100
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=30.91 E-value=62 Score=27.73 Aligned_cols=37 Identities=3% Similarity=0.025 Sum_probs=26.2
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCC
Q psy8693 61 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLP 108 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~ 108 (282)
..+++.+||+|.+|+-...+ ......+.+.+++.+.+
T Consensus 168 ~~~~~~~~d~V~lS~l~~~~-----------~~~~~~~i~~l~~~~~~ 204 (258)
T 2i2x_B 168 AAVQKEKPIMLTGTALMTTT-----------MYAFKEVNDMLLENGIK 204 (258)
T ss_dssp HHHHHHCCSEEEEECCCTTT-----------TTHHHHHHHHHHTTTCC
T ss_pred HHHHHcCCCEEEEEeeccCC-----------HHHHHHHHHHHHhcCCC
Confidence 56678899999999874322 33567778888876544
No 101
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=30.75 E-value=1.9e+02 Score=29.00 Aligned_cols=73 Identities=19% Similarity=0.139 Sum_probs=46.1
Q ss_pred cEEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCC
Q psy8693 36 YAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLP 108 (282)
Q Consensus 36 ~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~ 108 (282)
-++|=| +-.+=+.+.+..+.+.+..+.+.-.--+||+ ++|.|...-. .+. ....+..+.+.+..+.+|
T Consensus 34 itlnrP-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~---~~~-~~~~~~~~~~~i~~~~kP 108 (742)
T 3zwc_A 34 IRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS---AFT-PGLALGSLVDEIQRYQKP 108 (742)
T ss_dssp EEECCT-TTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCC---SSC-SCSHHHHHHHHHHHCSSC
T ss_pred EEeCCC-cccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhh---ccC-hhHHHHHHHHHHHhCCCC
Confidence 457777 5566677888888888876554444446666 3556654322 111 123466778888889999
Q ss_pred EEEEe
Q psy8693 109 FLMVG 113 (282)
Q Consensus 109 ~~~v~ 113 (282)
+|+..
T Consensus 109 vIAai 113 (742)
T 3zwc_A 109 VLAAI 113 (742)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98654
No 102
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=30.56 E-value=72 Score=27.28 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=44.1
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEec--------CCCCCCCCcCCCCCCC----HHHH-HHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQC--------GADSLTGDRLGCFNLT----VRGH-GKCVEFVK 103 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~--------G~D~~~~Dplg~~~lt----~~~~-~~~~~~~~ 103 (282)
++|=| +..+=+.+.+..+.+.+..+-+.-...+||+.. |.|.-. +..-.-. .+.+ ..+.+.+.
T Consensus 23 tlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~---~~~~~~~~~~~~~~~~~~~~~~l~ 98 (265)
T 2ppy_A 23 HLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINF---LRSADPRFKTQFCLFCNETLDKIA 98 (265)
T ss_dssp EECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHH---HTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHH---HhccchhHHHHHHHHHHHHHHHHH
Confidence 57778 777777778888888776654444456777765 555321 1110000 1123 45566677
Q ss_pred hcCCCEEEEeCC
Q psy8693 104 RYNLPFLMVGGG 115 (282)
Q Consensus 104 ~~~~~~~~v~eG 115 (282)
.+.+|+|....|
T Consensus 99 ~~~kPvIAav~G 110 (265)
T 2ppy_A 99 RSPQVYIACLEG 110 (265)
T ss_dssp HSSSEEEEEECS
T ss_pred cCCCCEEEEECC
Confidence 789999877643
No 103
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=30.46 E-value=43 Score=29.58 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEE
Q psy8693 53 SIFVPIISKVMETFQPSAVVL 73 (282)
Q Consensus 53 ~~~~~~l~~~~~~f~Pd~ivv 73 (282)
..+.+.|..++++++||+|+.
T Consensus 115 ~~~~~~l~~~ir~~rP~vV~t 135 (303)
T 1q74_A 115 RQTVGALVAIIRELRPHVVVT 135 (303)
T ss_dssp HHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEE
Confidence 344455668899999999885
No 104
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=30.05 E-value=1.5e+02 Score=25.26 Aligned_cols=74 Identities=14% Similarity=0.046 Sum_probs=41.1
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCC----H-H---H----HHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLT----V-R---G----HGK 97 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt----~-~---~----~~~ 97 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-...+||+ ++|.|.-.- .. .+ . + . +..
T Consensus 17 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~--~~~~~~~~~~~~~~~~~~~~ 91 (269)
T 1nzy_A 17 TIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI---PL--DKGVAGVRDHFRIAALWWHQ 91 (269)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGS---CS--SSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHH---hh--cccccChHHHHHHHHHHHHH
Confidence 3444433344456677777777766555445567777 456665321 11 11 1 1 1 234
Q ss_pred HHHHHHhcCCCEEEEeCC
Q psy8693 98 CVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 98 ~~~~~~~~~~~~~~v~eG 115 (282)
+.+.+..+.+|+|....|
T Consensus 92 ~~~~l~~~~kPvIAav~G 109 (269)
T 1nzy_A 92 MIHKIIRVKRPVLAAING 109 (269)
T ss_dssp HHHHHHHCSSCEEEEECS
T ss_pred HHHHHHhCCCCEEEEECC
Confidence 455667789999976543
No 105
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=29.54 E-value=1.5e+02 Score=25.51 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=43.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEec-------CCCCCCCCcCCCCCCC-------HHHHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQC-------GADSLTGDRLGCFNLT-------VRGHGKCVEFV 102 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~-------G~D~~~~Dplg~~~lt-------~~~~~~~~~~~ 102 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-...+||+.. |.|...-..... .-. .+.+..+.+.+
T Consensus 31 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 109 (279)
T 3g64_A 31 TLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATL-SMDTARLLDFNRMTGQVVRAV 109 (279)
T ss_dssp EESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHT-TCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccc-cchhhHHHHHHHHHHHHHHHH
Confidence 455554445667778888888887765555556777643 333322100000 000 11234456667
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 110 ~~~~kPvIAav~G 122 (279)
T 3g64_A 110 RECPFPVIAALHG 122 (279)
T ss_dssp HHSSSCEEEEECS
T ss_pred HhCCCCEEEEEcC
Confidence 7789999876644
No 106
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=29.51 E-value=1.2e+02 Score=23.41 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=15.6
Q ss_pred HHHHHHHhcCC--CEEEEeCCCCC
Q psy8693 97 KCVEFVKRYNL--PFLMVGGGGYT 118 (282)
Q Consensus 97 ~~~~~~~~~~~--~~~~v~eGGY~ 118 (282)
++.+.+++.+- +-+.++.||+.
T Consensus 88 ~~~~~L~~~G~~~~~v~~L~GG~~ 111 (152)
T 2j6p_A 88 RFALAQKKLGYVLPAVYVLRGGWE 111 (152)
T ss_dssp HHHHHHHHHTCCCSEEEEETTHHH
T ss_pred HHHHHHHHcCCCCCCEEEEcCcHH
Confidence 45566666663 46889999986
No 107
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=29.12 E-value=25 Score=30.32 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=41.2
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHH-----HHHHHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVR-----GHGKCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~-----~~~~~~~~~~~ 104 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+ ++|.|...-. ..+.. .+..+.+.+..
T Consensus 24 tlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~-----~~~~~~~~~~~~~~~~~~l~~ 98 (263)
T 3moy_A 24 RLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMV-----TLTPHQARERNLLSGWDSLTQ 98 (263)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHT-----TCCHHHHHHTTTTHHHHHHTT
T ss_pred EEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHh-----ccCchhHHHHHHHHHHHHHHh
Confidence 5666655456667777888888876555444456665 4444432211 11111 12234566777
Q ss_pred cCCCEEEEeC
Q psy8693 105 YNLPFLMVGG 114 (282)
Q Consensus 105 ~~~~~~~v~e 114 (282)
+.+|+|....
T Consensus 99 ~~kPvIAav~ 108 (263)
T 3moy_A 99 VRKPIVAAVA 108 (263)
T ss_dssp CCSCEEEEEC
T ss_pred CCCCEEEEEC
Confidence 8899887654
No 108
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=29.07 E-value=77 Score=25.59 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=25.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecC
Q psy8693 42 LRDGMDDESYESIFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 42 l~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
.+......+=+..+.+-|..++++|+||.+++=.=
T Consensus 38 t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~ 72 (166)
T 4ep4_A 38 TSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQ 72 (166)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeeh
Confidence 44555556666666677889999999999998543
No 109
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=29.03 E-value=1e+02 Score=25.39 Aligned_cols=55 Identities=18% Similarity=0.305 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHH-cCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeC
Q psy8693 51 YESIFVPIISKVMET-FQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGG 114 (282)
Q Consensus 51 y~~~~~~~l~~~~~~-f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~e 114 (282)
....+++++..+.+. -+||+||+ +| |..... +.+.|..+.+.+++++.|++++.|
T Consensus 24 ~~~~l~~~l~~~~~~~~~~d~vi~-~G-Dl~~~~-------~~~~~~~~~~~l~~l~~p~~~v~G 79 (274)
T 3d03_A 24 VNAANADVVSQLNALRERPDAVVV-SG-DIVNCG-------RPEEYQVARQILGSLNYPLYLIPG 79 (274)
T ss_dssp HHHHHHHHHHHHHTCSSCCSEEEE-ES-CCBSSC-------CHHHHHHHHHHHTTCSSCEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEE-CC-CCCCCC-------CHHHHHHHHHHHHhcCCCEEEECC
Confidence 455677777544333 26798774 33 433221 345677777888878888766554
No 110
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=28.83 E-value=57 Score=27.77 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCC
Q psy8693 241 VPIISKVMETFQPSAVVLQCGADSLT 266 (282)
Q Consensus 241 ~~~~~~~~~~f~P~~ivvsaG~D~~~ 266 (282)
.+.|..++++++||+|+.-.+.|.|.
T Consensus 86 ~~~l~~~ir~~~PdvV~t~~~~d~H~ 111 (242)
T 2ixd_A 86 IREIVKVIRTYKPKLVFAPYYEDRHP 111 (242)
T ss_dssp HHHHHHHHHHHCCSEEEEECSCSSSH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCh
Confidence 35566788999999999877767663
No 111
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=28.75 E-value=1.4e+02 Score=26.93 Aligned_cols=52 Identities=12% Similarity=0.222 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc---CCCEEEEe
Q psy8693 52 ESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY---NLPFLMVG 113 (282)
Q Consensus 52 ~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~---~~~~~~v~ 113 (282)
...++.++. .+++-+||+||+ +| |..... +...|..+.+.++.+ +.|+++|.
T Consensus 78 ~~~l~~~~~-~~~~~~~d~vi~-~G-Dl~~~~-------~~~~~~~~~~~l~~l~~~~~~~~~v~ 132 (443)
T 2xmo_A 78 DEITDAFLA-DVESKKTDVLII-SG-DLTNNG-------EKTSHEELAKKLTQVEKNGTQVFVVP 132 (443)
T ss_dssp HHHHHHHHH-HHHHHTCSEEEE-ES-CCBSSC-------CHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHH-HHHHcCCCEEEE-CC-CCCCCC-------CHHHHHHHHHHHHHHHhCCCeEEEEC
Confidence 456666664 345679998876 44 433221 234556555555554 77877664
No 112
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=28.65 E-value=2.7e+02 Score=25.72 Aligned_cols=23 Identities=4% Similarity=0.307 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
-+.+.|..+++.|+|++|+|...
T Consensus 83 ~L~~aI~~~~~~~~P~~I~V~tT 105 (458)
T 1mio_B 83 NIKTAVKNIFSLYNPDIIAVHTT 105 (458)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEECC
Confidence 55667777888999999888753
No 113
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=28.58 E-value=1.4e+02 Score=24.78 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=31.6
Q ss_pred HHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCC
Q psy8693 64 ETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGS 136 (282)
Q Consensus 64 ~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~ 136 (282)
.+.+||+||.+.+. .....+.+.+.++|++++-. .+...+.+ +...++.++|+
T Consensus 57 ~~l~PDLIi~~~~~-----------------~~~~~~~L~~~gipvv~~~~--~~~~~~~~-~i~~lg~~~g~ 109 (260)
T 2q8p_A 57 KKLKPTHVLSVSTI-----------------KDEMQPFYKQLNMKGYFYDF--DSLKGMQK-SITQLGDQFNR 109 (260)
T ss_dssp HHTCCSEEEEEGGG-----------------HHHHHHHHHHHTSCCEEECC--SSHHHHHH-HHHHHHHHTTC
T ss_pred HhcCCCEEEecCcc-----------------CHHHHHHHHHcCCcEEEecC--CCHHHHHH-HHHHHHHHhCC
Confidence 47899999976431 13456677778889887632 22233333 33455666774
No 114
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=28.57 E-value=1.6e+02 Score=21.43 Aligned_cols=19 Identities=21% Similarity=0.585 Sum_probs=8.6
Q ss_pred HHHHHHhcCCCEEEEeCCC
Q psy8693 98 CVEFVKRYNLPFLMVGGGG 116 (282)
Q Consensus 98 ~~~~~~~~~~~~~~v~eGG 116 (282)
+.+.+++.+.-+++++.-|
T Consensus 102 I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 102 IVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHhCCCEEEEeCCC
Confidence 4444444444445554443
No 115
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.50 E-value=42 Score=27.05 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=23.9
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 222 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 222 ~~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
.+|..+.. .+..+.+..+++.+ ..++||+|+|..|.
T Consensus 53 viN~Gi~G-~tt~~~l~r~~~~v----~~~~Pd~vvi~~G~ 88 (209)
T 4hf7_A 53 YIGRGISG-QTSYQFLLRFREDV----INLSPALVVINAGT 88 (209)
T ss_dssp EEEEECTT-CCHHHHHHHHHHHT----GGGCCSEEEECCCH
T ss_pred EEEeccCc-ccHHHHHHHHHHHH----HhcCCCEEEEEeCC
Confidence 46766653 33455566665533 35899999999997
No 116
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=28.17 E-value=51 Score=29.06 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCCEEEE--ecCCCCC
Q psy8693 239 IFVPIISKVMETFQPSAVVL--QCGADSL 265 (282)
Q Consensus 239 ~~~~~~~~~~~~f~P~~ivv--saG~D~~ 265 (282)
.+.+.|..+|++++||+|+. -.|.|.|
T Consensus 116 ~~~~~l~~~ir~~rP~vV~t~~p~g~~~H 144 (303)
T 1q74_A 116 QTVGALVAIIRELRPHVVVTYDPNGGYGH 144 (303)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECTTTTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 34455668889999999886 3566666
No 117
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=28.00 E-value=78 Score=27.16 Aligned_cols=78 Identities=14% Similarity=0.060 Sum_probs=43.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCC-----CCcCCCCCCCHHHHHHHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLT-----GDRLGCFNLTVRGHGKCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~-----~Dplg~~~lt~~~~~~~~~~~~~ 104 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+. +|.|.-. ..+-.... ....+..+.+.+..
T Consensus 19 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 97 (266)
T 3fdu_A 19 AINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPA-GQVPPFVLLKSAAR 97 (266)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCG-GGSHHHHHHHHHHH
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhH-HHHHHHHHHHHHHh
Confidence 34555444555667777777777665554445577764 4444321 11111101 12234566777888
Q ss_pred cCCCEEEEeCC
Q psy8693 105 YNLPFLMVGGG 115 (282)
Q Consensus 105 ~~~~~~~v~eG 115 (282)
+.+|+|....|
T Consensus 98 ~~kPvIAav~G 108 (266)
T 3fdu_A 98 LSKPLIIAVKG 108 (266)
T ss_dssp CCSCEEEEECS
T ss_pred CCCCEEEEECC
Confidence 99999876643
No 118
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.81 E-value=46 Score=28.04 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 238 SIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 238 ~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
..+++.+...+++++||+||+ |||-
T Consensus 69 ~~~d~~~~~~l~~~~~Dliv~-agy~ 93 (215)
T 3tqr_A 69 TDFESTLQKTIDHYDPKLIVL-AGFM 93 (215)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE-SSCC
T ss_pred hHhHHHHHHHHHhcCCCEEEE-ccch
Confidence 344666778889999998765 6664
No 119
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=27.78 E-value=46 Score=27.98 Aligned_cols=26 Identities=15% Similarity=0.232 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCC
Q psy8693 241 VPIISKVMETFQPSAVVLQCGADSLT 266 (282)
Q Consensus 241 ~~~~~~~~~~f~P~~ivvsaG~D~~~ 266 (282)
.+.|..++++++||+|+.-.+.|.|.
T Consensus 84 ~~~l~~~ir~~~P~~V~t~~~~d~H~ 109 (227)
T 1uan_A 84 RLKLAQALRRLRPRVVFAPLEADRHP 109 (227)
T ss_dssp HHHHHHHHHHHCEEEEEEECSCCSSH
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCCCh
Confidence 35566788999999999877777663
No 120
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=27.56 E-value=1.9e+02 Score=21.57 Aligned_cols=13 Identities=8% Similarity=0.181 Sum_probs=6.0
Q ss_pred HHHHcCCCEEEEe
Q psy8693 62 VMETFQPSAVVLQ 74 (282)
Q Consensus 62 ~~~~f~Pd~ivv~ 74 (282)
.+++.+.|+||+.
T Consensus 115 ~a~~~~~dlIV~G 127 (162)
T 1mjh_A 115 IAEDEGVDIIIMG 127 (162)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCCEEEEc
Confidence 3444445555443
No 121
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=27.50 E-value=66 Score=28.85 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=24.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
+.|| .|........-.+ .|..++++.+||+|.+|=-
T Consensus 124 SWNI---~Gl~~~~~~~R~~-~I~~~I~~~~PDIV~LQEv 159 (362)
T 4gew_A 124 SWNI---DGLDGRSLLTRMK-AVAHIVKNVNPDILFLQEV 159 (362)
T ss_dssp EEEC---CTTCCTTHHHHHH-HHHHHHHHHCCSEEEEEEE
T ss_pred EEEe---CCCCCcCHHHHHH-HHHHHHHHcCCCEEEEEcC
Confidence 4566 3554444444444 3457889999999999984
No 122
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=27.23 E-value=1e+02 Score=26.83 Aligned_cols=39 Identities=10% Similarity=0.170 Sum_probs=26.8
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCC
Q psy8693 61 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNL 107 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~ 107 (282)
..+.+.+||+|.+|+=.. .-..+.....++.+.+++.+.
T Consensus 174 ~aa~e~~~d~VglS~l~t--------~~~~~~~~~~~~i~~L~~~g~ 212 (262)
T 1xrs_B 174 KKAVELEADVLLVSQTVT--------QKNVHIQNMTHLIELLEAEGL 212 (262)
T ss_dssp HHHHHTTCSEEEEECCCC--------TTSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEEeecC--------CccchHHHHHHHHHHHHhcCC
Confidence 456688999999998522 112245667778888887654
No 123
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.18 E-value=1.5e+02 Score=25.79 Aligned_cols=54 Identities=9% Similarity=0.021 Sum_probs=32.8
Q ss_pred HHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCC
Q psy8693 62 VMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGS 136 (282)
Q Consensus 62 ~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~ 136 (282)
.+.+-+||+||.+.. .....+.|.+.+.|++++-.. +...+ +-+...++.++|+
T Consensus 111 ~i~al~PDLIi~~~~------------------~~~~~~~L~~~gipvv~~~~~--~~~~~-~~~i~~lg~~lg~ 164 (335)
T 4hn9_A 111 ACVAATPDVVFLPMK------------------LKKTADTLESLGIKAVVVNPE--DQSLL-EECITLVGKITNN 164 (335)
T ss_dssp HHHHTCCSEEEEEGG------------------GHHHHHHHHHTTCCEEEECCC--SHHHH-HHHHHHHHHHTTC
T ss_pred HHHhcCCCEEEEeCc------------------chhHHHHHHHcCCCEEEEcCC--CHHHH-HHHHHHHHHHcCC
Confidence 344789999998631 134567778889999887421 22222 2334555666764
No 124
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=26.82 E-value=69 Score=27.59 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=40.7
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC-CcCCCC----CCCH-------HHHHHHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG-DRLGCF----NLTV-------RGHGKCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~-Dplg~~----~lt~-------~~~~~~~~~~~~ 104 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+...-++... --+..+ .-+. ..+..+.+.+..
T Consensus 18 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (268)
T 3i47_A 18 TMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQ 97 (268)
T ss_dssp EECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHh
Confidence 3454544455566777777777766555444456776432121111 001000 0111 223445666777
Q ss_pred cCCCEEEEeCC
Q psy8693 105 YNLPFLMVGGG 115 (282)
Q Consensus 105 ~~~~~~~v~eG 115 (282)
+.+|+|....|
T Consensus 98 ~~kPvIAav~G 108 (268)
T 3i47_A 98 SPKPTIAMVQG 108 (268)
T ss_dssp CSSCEEEEECS
T ss_pred CCCCEEEEECC
Confidence 89999987653
No 125
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=26.63 E-value=81 Score=24.57 Aligned_cols=9 Identities=44% Similarity=0.726 Sum_probs=7.9
Q ss_pred EEEeCCCCC
Q psy8693 110 LMVGGGGYT 118 (282)
Q Consensus 110 ~~v~eGGY~ 118 (282)
|.+|.|||.
T Consensus 133 V~~L~GG~~ 141 (157)
T 2gwf_A 133 PLVLEGGYE 141 (157)
T ss_dssp CEEETTHHH
T ss_pred eEEEccHHH
Confidence 688999997
No 126
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=26.59 E-value=1e+02 Score=26.77 Aligned_cols=75 Identities=9% Similarity=0.068 Sum_probs=39.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHH-------HHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVR-------GHGKCVEFV 102 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~-------~~~~~~~~~ 102 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-...+||+ ++|.|.-.- .... ..+ .+..+.+.+
T Consensus 47 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~---~~~~-~~~~~~~~~~~~~~~~~~l 122 (287)
T 2vx2_A 47 VLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKEL---TEEQ-GRDYHAEVFQTCSKVMMHI 122 (287)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-C---CGGG-CHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHH---hccc-chhHHHHHHHHHHHHHHHH
Confidence 4555544455566677777666654333223356766 467775321 1100 111 223445566
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 123 ~~~~kPvIAav~G 135 (287)
T 2vx2_A 123 RNHPVPVIAMVNG 135 (287)
T ss_dssp HTCSSCEEEEECS
T ss_pred HhCCCCEEEEECC
Confidence 7789999987653
No 127
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=26.34 E-value=94 Score=25.56 Aligned_cols=25 Identities=12% Similarity=0.093 Sum_probs=14.6
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCcC
Q psy8693 95 HGKCVEFVKRYNLPFLMVGGGGYTIR 120 (282)
Q Consensus 95 ~~~~~~~~~~~~~~~~~v~eGGY~~~ 120 (282)
+..+.+.+++.+.|+++| -|-.+..
T Consensus 78 ~~~~l~~l~~~~~pv~~v-~GNHD~~ 102 (260)
T 2yvt_A 78 LDKFFREIGELGVKTFVV-PGKNDAP 102 (260)
T ss_dssp HHHHHHHHHTTCSEEEEE-CCTTSCC
T ss_pred HHHHHHHHHhcCCcEEEE-cCCCCch
Confidence 445556666667777654 4655543
No 128
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=26.34 E-value=95 Score=25.04 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=26.1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecC
Q psy8693 227 LRDGMDDESYESIFVPIISKVMETFQPSAVVLQCG 261 (282)
Q Consensus 227 l~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG 261 (282)
.+......+=+..+.+.|..++++|+||.+.|=.=
T Consensus 38 t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~ 72 (166)
T 4ep4_A 38 TSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQ 72 (166)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeeh
Confidence 34455556666777778889999999999988443
No 129
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=25.73 E-value=1.9e+02 Score=20.93 Aligned_cols=15 Identities=7% Similarity=0.313 Sum_probs=8.4
Q ss_pred HHHHHcCCCEEEEec
Q psy8693 61 KVMETFQPSAVVLQC 75 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~ 75 (282)
..+++.+.|+||+.+
T Consensus 100 ~~a~~~~~dliV~G~ 114 (143)
T 3fdx_A 100 ALAKSLPADLVIIAS 114 (143)
T ss_dssp HHHHHTTCSEEEEES
T ss_pred HHHHHhCCCEEEEeC
Confidence 345555666666554
No 130
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=25.68 E-value=1.2e+02 Score=25.47 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeC
Q psy8693 51 YESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGG 114 (282)
Q Consensus 51 y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~e 114 (282)
.+..+++++.. +.+-+||+||+. | |.....+- .-.-+.+.|..+.+.+.+.+.|++++.|
T Consensus 36 ~~~~l~~~~~~-~~~~~~d~vi~~-G-D~~~~~~~-~~~~~~~~~~~~~~~l~~~~~p~~~v~G 95 (322)
T 2nxf_A 36 SADLLRDAVLQ-WRRERVQCVVQL-G-DIIDGHNR-RRDASDRALDTVMAELDACSVDVHHVWG 95 (322)
T ss_dssp HHHHHHHHHHH-HHHTTCSEEEEC-S-CCBCTHHH-HTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHH-HHhcCCCEEEEC-C-CccCCCCC-cchHHHHHHHHHHHHHHhcCCcEEEecC
Confidence 34566666643 445789987743 3 33322110 0011256777788888888888876653
No 131
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=25.36 E-value=27 Score=28.20 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=22.8
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 223 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 223 ~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
+|..+.. .+..+.+..++..+++.+...+||+|+|+.|.
T Consensus 60 ~n~g~~G-~t~~~~~~~~~~~~~~~~~~~~pd~vvi~~G~ 98 (218)
T 1vjg_A 60 YNLGIRR-DTSSDIAKRWLQEVSLRLHKEYNSLVVFSFGL 98 (218)
T ss_dssp EEEECTT-CCHHHHHHHHHHHHHTTCCTTSEEEEEEECCH
T ss_pred EeCCCCC-cCHHHHHHHhHHhhhhhhccCCCCEEEEEecC
Confidence 5555543 33445555554433222223599999999996
No 132
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=24.99 E-value=1.1e+02 Score=27.46 Aligned_cols=72 Identities=11% Similarity=0.134 Sum_probs=52.6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHH----HHHHHHHHHHhcCCCEEEEeCC
Q psy8693 44 DGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVR----GHGKCVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 44 ~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~----~~~~~~~~~~~~~~~~~~v~eG 115 (282)
.+.+.+.+++..+.++..=+.+...+.|+|-+|-.....|..|.+...++ |+..+++.+++.+.++-+=.+-
T Consensus 21 ~~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~ 96 (362)
T 1uas_A 21 CGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDA 96 (362)
T ss_dssp TCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeC
Confidence 34666667666666554445688899999999988766677788866654 8999999999988775443443
No 133
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=24.97 E-value=88 Score=25.11 Aligned_cols=30 Identities=20% Similarity=0.426 Sum_probs=20.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy8693 230 GMDDESYESIFVPIISKVMETFQPSAVVLQC 260 (282)
Q Consensus 230 g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsa 260 (282)
|.......... +.|...|++.+||+|.+|=
T Consensus 23 g~~~~~~~~r~-~~i~~~i~~~~pDIi~LQE 52 (256)
T 4fva_A 23 GLDGRSLLTRM-KAVAHIVKNVNPDILFLQE 52 (256)
T ss_dssp TTCCTTHHHHH-HHHHHHHHHHCCSEEEEEE
T ss_pred CCCCcCHHHHH-HHHHHHHHHcCCCEEEEEe
Confidence 33333444444 3456888999999999885
No 134
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=24.68 E-value=1e+02 Score=25.91 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q psy8693 50 SYESIFVPIISKVMETFQPSAVVLQCGADSL 80 (282)
Q Consensus 50 ~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~ 80 (282)
..+..+++.+ .++++...+.|++.+|+...
T Consensus 101 ~~~~~~~~~i-~~a~~lGa~~v~~~~g~~~~ 130 (287)
T 3kws_A 101 ECMDTMKEII-AAAGELGSTGVIIVPAFNGQ 130 (287)
T ss_dssp HHHHHHHHHH-HHHHHTTCSEEEECSCCTTC
T ss_pred HHHHHHHHHH-HHHHHcCCCEEEEecCcCCc
Confidence 3445666665 56789999999998887654
No 135
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=24.58 E-value=2.3e+02 Score=25.37 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC
Q psy8693 52 ESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGY 117 (282)
Q Consensus 52 ~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY 117 (282)
..++. -+.+++++++||+|++..+ +...+.. ....+..++|++ ..++|-
T Consensus 97 ~~~~~-~l~~~l~~~kPDvVi~~g~--------------~~~~~~~-~~aa~~~~IPv~-h~~ag~ 145 (396)
T 3dzc_A 97 SKILL-GMQQVLSSEQPDVVLVHGD--------------TATTFAA-SLAAYYQQIPVG-HVEAGL 145 (396)
T ss_dssp HHHHH-HHHHHHHHHCCSEEEEETT--------------SHHHHHH-HHHHHTTTCCEE-EETCCC
T ss_pred HHHHH-HHHHHHHhcCCCEEEEECC--------------chhHHHH-HHHHHHhCCCEE-EEECCc
Confidence 34444 4567889999999987643 1222221 223455689975 456654
No 136
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=24.50 E-value=1.5e+02 Score=25.14 Aligned_cols=74 Identities=12% Similarity=0.020 Sum_probs=41.7
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCC--HHHHH---HHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLT--VRGHG---KCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt--~~~~~---~~~~~~~~ 104 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-+..+||+ ++|.|.-. +.. .+ .+.+. .+...+..
T Consensus 19 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~---~~~--~~~~~~~~~~~~~~~~~l~~ 93 (258)
T 2pbp_A 19 ELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQE---MAK--DDPIRLEWLNQFADWDRLSI 93 (258)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHH---HHT--CCHHHHHHHCTTHHHHHHHT
T ss_pred EEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHH---Hhc--ccchhHHHHHHHHHHHHHHh
Confidence 3455544455566777777777766554444567776 56776532 100 11 11111 34556777
Q ss_pred cCCCEEEEeCC
Q psy8693 105 YNLPFLMVGGG 115 (282)
Q Consensus 105 ~~~~~~~v~eG 115 (282)
+.+|+|....|
T Consensus 94 ~~kPvIAav~G 104 (258)
T 2pbp_A 94 VKTPMIAAVNG 104 (258)
T ss_dssp CCSCEEEEECS
T ss_pred CCCCEEEEEcC
Confidence 89999876643
No 137
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=24.08 E-value=2.3e+02 Score=21.32 Aligned_cols=22 Identities=14% Similarity=0.303 Sum_probs=12.1
Q ss_pred HHHHHHHhcCCCEEEEeCCCCC
Q psy8693 97 KCVEFVKRYNLPFLMVGGGGYT 118 (282)
Q Consensus 97 ~~~~~~~~~~~~~~~v~eGGY~ 118 (282)
.+.+.+++.+.-+|+++.-|.+
T Consensus 108 ~I~~~a~~~~~DlIV~G~~g~~ 129 (170)
T 2dum_A 108 EIVKVAEEENVSLIILPSRGKL 129 (170)
T ss_dssp HHHHHHHHTTCSEEEEESCCCC
T ss_pred HHHHHHHHcCCCEEEECCCCCC
Confidence 4455555555556666655543
No 138
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=23.85 E-value=65 Score=27.32 Aligned_cols=75 Identities=21% Similarity=0.148 Sum_probs=39.8
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCC-CCCHH------H-HHHHHHHH
Q psy8693 38 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCF-NLTVR------G-HGKCVEFV 102 (282)
Q Consensus 38 ~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~-~lt~~------~-~~~~~~~~ 102 (282)
+|=|=...+=+.+.+..+.+.+..+-+.-+..+||+. +|.|.-. +... ..+.. . +..+.+.+
T Consensus 14 lnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~---~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (253)
T 1uiy_A 14 LNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAF---LERVTELGAEENYRHSLSLMRLFHRV 90 (253)
T ss_dssp ECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHH---HHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHH---HHhcccCCchhHHHHHHHHHHHHHHH
Confidence 4444333444566777777777665544455677774 4544321 0000 00111 1 33455667
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 91 ~~~~kPvIAav~G 103 (253)
T 1uiy_A 91 YTYPKPTVAAVNG 103 (253)
T ss_dssp HHCSSCEEEEECS
T ss_pred HhCCCCEEEEECC
Confidence 7789999986643
No 139
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=23.82 E-value=98 Score=24.26 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=14.6
Q ss_pred HHHHHHHHHcCCCEEEEe
Q psy8693 242 PIISKVMETFQPSAVVLQ 259 (282)
Q Consensus 242 ~~~~~~~~~f~P~~ivvs 259 (282)
+.|...|++.+||+|.+|
T Consensus 24 ~~i~~~i~~~~pDIi~LQ 41 (250)
T 4f1h_A 24 RGLCSYLALYTPDVVFLQ 41 (250)
T ss_dssp HHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 345678889999999987
No 140
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=23.64 E-value=1.2e+02 Score=25.50 Aligned_cols=30 Identities=17% Similarity=-0.002 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCEEEEecCCCC
Q psy8693 49 ESYESIFVPIISKVMETFQPSAVVLQCGADS 79 (282)
Q Consensus 49 ~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~ 79 (282)
+.-+..+++.+ .++++.....|++.+|...
T Consensus 98 ~~~~~~~~~~i-~~a~~lG~~~v~~~~G~~~ 127 (290)
T 3tva_A 98 ASRVAEMKEIS-DFASWVGCPAIGLHIGFVP 127 (290)
T ss_dssp HHHHHHHHHHH-HHHHHHTCSEEEECCCCCC
T ss_pred HHHHHHHHHHH-HHHHHcCCCEEEEcCCCCc
Confidence 44556777766 6788999999999999653
No 141
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.53 E-value=1.6e+02 Score=27.46 Aligned_cols=57 Identities=14% Similarity=0.175 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC-CCCCCCcCCCCCCCHHHHHHHHHHHHhc-----CCCEEEEeCCCCCcC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCGA-DSLTGDRLGCFNLTVRGHGKCVEFVKRY-----NLPFLMVGGGGYTIR 120 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G~-D~~~~Dplg~~~lt~~~~~~~~~~~~~~-----~~~~~~v~eGGY~~~ 120 (282)
-+.+.|..+++.|+|++|+|...+ -...+| +...+.+.+++. +.||+.+--.||.-.
T Consensus 79 ~L~~~I~~~~~~~~P~~I~V~tTC~~e~IGd----------Di~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs 141 (458)
T 3pdi_B 79 NVVEALKTICERQNPSVIGLLTTGLSETQGC----------DLHTALHEFRTQYEEYKDVPIVPVNTPDFSGC 141 (458)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEECHHHHTTCT----------THHHHHHHTTTSCCSCSCSCEEEECCCTTSSC
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHhcC----------CHHHHHHHHHHhccccCCCeEEEeeCCCcCCc
Confidence 455666677889999999987652 222233 334445555542 689999999999763
No 142
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=23.49 E-value=62 Score=24.90 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=23.2
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 222 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 222 ~~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
.+|..+. |.+..+.+..+++ .+...+||+|||+.|..
T Consensus 42 v~n~g~~-G~~~~~~~~~~~~----~~~~~~pd~vvi~~G~N 78 (195)
T 1yzf_A 42 VINAGMP-GDTTEDGLKRLNK----EVLIEKPDEVVIFFGAN 78 (195)
T ss_dssp EEEEECT-TCCHHHHHHHHHH----HTGGGCCSEEEEECCTT
T ss_pred EEeCCCC-CCCHHHHHHHHHH----hhhhcCCCEEEEEeecc
Confidence 3565554 3334455554443 33568999999999974
No 143
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=23.06 E-value=3.3e+02 Score=23.27 Aligned_cols=77 Identities=17% Similarity=0.102 Sum_probs=41.2
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCCC-H-------HHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNLT-V-------RGHGKCVEF 101 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~lt-~-------~~~~~~~~~ 101 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-...+||+. +|.|.-.-..... .-. . +.+..+.+.
T Consensus 34 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 112 (279)
T 3t3w_A 34 TLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPD-KLTLEFIYAHESRRYLEYSLR 112 (279)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC---------CCHHHHHHHHHHHTHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhccc-ccchHHHHHHHHHHHHHHHHH
Confidence 56666555666777888888888765544444566664 3444321110000 000 1 112334566
Q ss_pred HHhcCCCEEEEeC
Q psy8693 102 VKRYNLPFLMVGG 114 (282)
Q Consensus 102 ~~~~~~~~~~v~e 114 (282)
+..+.+|+|....
T Consensus 113 l~~~~kPvIAav~ 125 (279)
T 3t3w_A 113 WRNVPKPSIAAVQ 125 (279)
T ss_dssp HHHCSSCEEEEEC
T ss_pred HHhCCCCEEEEEC
Confidence 7778999997664
No 144
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=22.97 E-value=1.1e+02 Score=26.11 Aligned_cols=78 Identities=15% Similarity=0.034 Sum_probs=40.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE-------ecCCCCCCCCcCCCCCCCHHHHHH-HHHHH-H--hc
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL-------QCGADSLTGDRLGCFNLTVRGHGK-CVEFV-K--RY 105 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv-------~~G~D~~~~Dplg~~~lt~~~~~~-~~~~~-~--~~ 105 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-...+||+ ++|.|.-..+. ....--.+.+.. +.+.+ . .+
T Consensus 23 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 101 (265)
T 3rsi_A 23 TMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWM-VRDGSAPPLDPATIGKGLLLSHTL 101 (265)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------CCCHHHHHHHTTSSCCC
T ss_pred EEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCCcccc-cchHHHHHHhHHHHHHHHHHhcCC
Confidence 4566655566677788888888876554444556765 56666541110 000000001123 56666 6 77
Q ss_pred CCCEEEEeCC
Q psy8693 106 NLPFLMVGGG 115 (282)
Q Consensus 106 ~~~~~~v~eG 115 (282)
.+|+|....|
T Consensus 102 ~kPvIAav~G 111 (265)
T 3rsi_A 102 TKPLIAAVNG 111 (265)
T ss_dssp SSCEEEEECS
T ss_pred CCCEEEEECC
Confidence 8899876654
No 145
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=22.74 E-value=90 Score=24.96 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=21.1
Q ss_pred eecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 224 NIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 224 N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
|...+ |.+..+.+..+++ .+...+||+|+|+.|.
T Consensus 60 n~g~~-G~~~~~~~~~l~~----~l~~~~pd~vvi~~G~ 93 (215)
T 2vpt_A 60 HEGHS-GWTIPQIASNINN----WLNTHNPDVVFLWIGG 93 (215)
T ss_dssp EEECT-TCCHHHHHHHHHH----HHHHHCCSEEEEECCH
T ss_pred ccCcC-chhHHHHHHHHHH----HhhccCCCEEEEEccc
Confidence 44443 3334455555544 3346899999999995
No 146
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=22.73 E-value=2.2e+02 Score=20.55 Aligned_cols=13 Identities=8% Similarity=0.153 Sum_probs=5.8
Q ss_pred HHHHcCCCEEEEe
Q psy8693 62 VMETFQPSAVVLQ 74 (282)
Q Consensus 62 ~~~~f~Pd~ivv~ 74 (282)
.+++.+.|+||+.
T Consensus 94 ~a~~~~~dliV~G 106 (137)
T 2z08_A 94 AARAEKADLIVMG 106 (137)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCCEEEEC
Confidence 3344444444443
No 147
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=22.49 E-value=72 Score=24.83 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=22.0
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Q psy8693 222 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGAD 263 (282)
Q Consensus 222 ~~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~D 263 (282)
.+|..+.. .+..+.+..++ ..+.+.+||+|||+.|..
T Consensus 37 v~n~g~~G-~~~~~~~~~~~----~~~~~~~pd~Vii~~G~N 73 (190)
T 1ivn_A 37 VVNASISG-DTSQQGLARLP----ALLKQHQPRWVLVELGGN 73 (190)
T ss_dssp EEECCCTT-CCHHHHHHHHH----HHHHHHCCSEEEEECCTT
T ss_pred EEecCCCC-chHHHHHHHHH----HHHHhcCCCEEEEEeecc
Confidence 34544432 22334444443 445568999999999963
No 148
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=22.47 E-value=2.8e+02 Score=23.41 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=39.3
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCCCHHH-------HHHHHHHHH
Q psy8693 38 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNLTVRG-------HGKCVEFVK 103 (282)
Q Consensus 38 ~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~lt~~~-------~~~~~~~~~ 103 (282)
+|-|=+...=+.+.+..+.+.+..+-+.-...+||+. +|.|.-. +.. .+.+. +..+.+.+.
T Consensus 31 lnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~---~~~--~~~~~~~~~~~~~~~~~~~l~ 105 (257)
T 1szo_A 31 VHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTS---FNL--GTPHDWDEIIFEGQRLLNNLL 105 (257)
T ss_dssp ECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGG---SCC--SSHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchh---hhc--CCHHHHHHHHHHHHHHHHHHH
Confidence 3444333333466777777777665444455677774 4555422 111 12221 123455666
Q ss_pred hcCCCEEEEeCC
Q psy8693 104 RYNLPFLMVGGG 115 (282)
Q Consensus 104 ~~~~~~~~v~eG 115 (282)
.+.+|+|....|
T Consensus 106 ~~~kPvIAav~G 117 (257)
T 1szo_A 106 SIEVPVIAAVNG 117 (257)
T ss_dssp HCCSCEEEEECS
T ss_pred cCCCcEEEEECC
Confidence 789999987764
No 149
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=22.39 E-value=1.1e+02 Score=23.45 Aligned_cols=36 Identities=8% Similarity=-0.086 Sum_probs=24.3
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCC
Q psy8693 61 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNL 107 (282)
Q Consensus 61 ~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~ 107 (282)
..+.+.+||+|.+|+=.. -+.....++.+.+++.+.
T Consensus 48 ~~a~~~~~d~v~lS~~~~-----------~~~~~~~~~i~~l~~~g~ 83 (137)
T 1ccw_A 48 KAAIETKADAILVSSLYG-----------QGEIDCKGLRQKCDEAGL 83 (137)
T ss_dssp HHHHHHTCSEEEEEECSS-----------THHHHHTTHHHHHHHTTC
T ss_pred HHHHhcCCCEEEEEecCc-----------CcHHHHHHHHHHHHhcCC
Confidence 456688999999998532 133445667778877644
No 150
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=22.16 E-value=95 Score=31.62 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=35.9
Q ss_pred CCCEEEEecCCCCCC---CCcCCCCCCCH--HHHHHHHHHHHhcCCCEEEEeCCCC
Q psy8693 67 QPSAVVLQCGADSLT---GDRLGCFNLTV--RGHGKCVEFVKRYNLPFLMVGGGGY 117 (282)
Q Consensus 67 ~Pd~ivv~~G~D~~~---~Dplg~~~lt~--~~~~~~~~~~~~~~~~~~~v~eGGY 117 (282)
+.|++||..|-+... +| ...+.|.. ..-.++++.+++.+.|+|+|+-.|=
T Consensus 479 ~aDv~Iv~~Ge~~~~e~~gD-r~~L~lp~g~~~q~~Li~av~a~g~pvVvVl~sGr 533 (822)
T 3rrx_A 479 KPDVAIVVIGEEPYAEWFGD-IELLEFQHETKHALALLKQLKADNIPVVTVFLSGR 533 (822)
T ss_dssp CCSEEEEEEECCCCCGGGGC-CSCCBTTTTTCHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred cCCeEEEEecCCcccccCCC-cccccCCCCChHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 689999999987643 35 34566652 2234678888888999998886663
No 151
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=22.16 E-value=2e+02 Score=21.69 Aligned_cols=19 Identities=16% Similarity=0.274 Sum_probs=8.8
Q ss_pred HHHHHHhcCCCEEEEeCCC
Q psy8693 98 CVEFVKRYNLPFLMVGGGG 116 (282)
Q Consensus 98 ~~~~~~~~~~~~~~v~eGG 116 (282)
+.+.+++.+.-+|+++.-|
T Consensus 109 I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 109 IVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp HHHHHHHTTCSEEEEECCE
T ss_pred HHHHHHHcCCCEEEECCCC
Confidence 4444444444455555433
No 152
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.89 E-value=83 Score=26.21 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHcCCCEEEEe
Q psy8693 55 FVPIISKVMETFQPSAVVLQ 74 (282)
Q Consensus 55 ~~~~l~~~~~~f~Pd~ivv~ 74 (282)
+++.+...+++++||+||+.
T Consensus 67 ~~~~~~~~l~~~~~Dliv~a 86 (209)
T 1meo_A 67 FDSAIDLVLEEFSIDIVCLA 86 (209)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred hhHHHHHHHHhcCCCEEEEc
Confidence 44445567789999987654
No 153
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.65 E-value=2.6e+02 Score=22.87 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=33.8
Q ss_pred HHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcChhHHHHHHHHHHHcCC
Q psy8693 63 METFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGS 136 (282)
Q Consensus 63 ~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGGY~~~~~~~~~~~~~~~~~g~ 136 (282)
+.+.+||+||.+.... . ....+.+.+.+.|++.+-. ..+...+. -+...++.++|+
T Consensus 55 i~~l~PDlIi~~~~~~------------~----~~~~~~L~~~gipvv~~~~-~~~~~~~~-~~i~~lg~~~g~ 110 (255)
T 3md9_A 55 ILAMKPTMLLVSELAQ------------P----SLVLTQIASSGVNVVTVPG-QTTPESVA-MKINAVATALHQ 110 (255)
T ss_dssp HHTTCCSEEEEETTCS------------C----HHHHHHHHHTTCEEEEECC-CCSHHHHH-HHHHHHHHHHTC
T ss_pred HHccCCCEEEEcCCcC------------c----hhHHHHHHHcCCcEEEeCC-CCCHHHHH-HHHHHHHHHhCC
Confidence 3378999999876521 1 2345677788889988743 23333332 334455666664
No 154
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=21.57 E-value=2.6e+02 Score=25.09 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEe
Q psy8693 52 ESIFVPIISKVMETFQPSAVVLQ 74 (282)
Q Consensus 52 ~~~~~~~l~~~~~~f~Pd~ivv~ 74 (282)
..++. -+.+++++++||+|++.
T Consensus 100 ~~~~~-~l~~~l~~~kPD~Vi~~ 121 (403)
T 3ot5_A 100 SRVMN-GINEVIAAENPDIVLVH 121 (403)
T ss_dssp HHHHH-HHHHHHHHHCCSEEEEE
T ss_pred HHHHH-HHHHHHHHcCCCEEEEE
Confidence 34444 45678899999999876
No 155
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=21.56 E-value=72 Score=26.70 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecC
Q psy8693 53 SIFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 53 ~~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
..+++.+...+++++||+||+ +|
T Consensus 72 ~~~d~~~~~~l~~~~~Dliv~-ag 94 (209)
T 4ds3_A 72 EAHEDAILAALDVLKPDIICL-AG 94 (209)
T ss_dssp HHHHHHHHHHHHHHCCSEEEE-SS
T ss_pred HHHHHHHHHHHHhcCCCEEEE-ec
Confidence 345555667788999999876 45
No 156
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=21.52 E-value=48 Score=28.53 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=23.9
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ 74 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~ 74 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-.--+||+.
T Consensus 25 tlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVlt 62 (262)
T 3r9q_A 25 ILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLW 62 (262)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 45656444566677888888888665544444567663
No 157
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=21.34 E-value=97 Score=26.83 Aligned_cols=77 Identities=18% Similarity=0.155 Sum_probs=40.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCC-C-CcCCCC-CCCHH-------HHHHHHHHHHhcC
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLT-G-DRLGCF-NLTVR-------GHGKCVEFVKRYN 106 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~-~-Dplg~~-~lt~~-------~~~~~~~~~~~~~ 106 (282)
++|=|=. .+=+.+.+..+.+.+..+-+.-..-+||+...-.... + | +..+ ..+.+ .+..+.+.+..+.
T Consensus 38 tlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~D-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 115 (277)
T 4di1_A 38 VVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDD-MPELRTLNAPEADTAARVRLEAIDAVAAIP 115 (277)
T ss_dssp EECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBC-HHHHHTCCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred EECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcC-cccccccChHHHHHHHHHHHHHHHHHHhCC
Confidence 4555544 5556777788888887665544455676643211111 0 1 1000 11221 2234556677789
Q ss_pred CCEEEEeCC
Q psy8693 107 LPFLMVGGG 115 (282)
Q Consensus 107 ~~~~~v~eG 115 (282)
+|+|+...|
T Consensus 116 kPvIAav~G 124 (277)
T 4di1_A 116 KPTVAAVTG 124 (277)
T ss_dssp SCEEEEECS
T ss_pred CCEEEEECC
Confidence 999977653
No 158
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=21.30 E-value=76 Score=26.69 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe
Q psy8693 53 SIFVPIISKVMETFQPSAVVLQ 74 (282)
Q Consensus 53 ~~~~~~l~~~~~~f~Pd~ivv~ 74 (282)
..+++.+...+++++||+||+.
T Consensus 75 ~~~d~~~~~~l~~~~~Dlivla 96 (215)
T 3da8_A 75 DAWDVAITAATAAHEPDLVVSA 96 (215)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEE
T ss_pred hhhhHHHHHHHHhhCCCEEEEc
Confidence 3445566678889999998874
No 159
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=21.28 E-value=1.2e+02 Score=25.24 Aligned_cols=46 Identities=24% Similarity=0.332 Sum_probs=35.3
Q ss_pred CEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc---CCCEEEEeCCC
Q psy8693 69 SAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY---NLPFLMVGGGG 116 (282)
Q Consensus 69 d~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~---~~~~~~v~eGG 116 (282)
..||+-.|--++.++ +...+..+-...+.+.+..+ +.++++|.+||
T Consensus 8 ~~iViK~GGs~l~~~--~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG 56 (239)
T 1ybd_A 8 KRVLLKLSGESLMGS--DPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGG 56 (239)
T ss_dssp SEEEEEECGGGGGTT--SSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred CEEEEEEchHHhCCC--CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCc
Confidence 579999998888765 34567888888887776653 66889999886
No 160
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=21.24 E-value=77 Score=26.86 Aligned_cols=22 Identities=18% Similarity=0.412 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
.+++.+...+++++||+||+ +|
T Consensus 88 ~~~~~~~~~l~~~~~Dliv~-ag 109 (229)
T 3auf_A 88 AFDAALAERLQAYGVDLVCL-AG 109 (229)
T ss_dssp HHHHHHHHHHHHTTCSEEEE-SS
T ss_pred hccHHHHHHHHhcCCCEEEE-cC
Confidence 44555567788999998765 45
No 161
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=21.22 E-value=2.3e+02 Score=26.25 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=46.4
Q ss_pred cEEeecCCCCCChhHHHHHHHHHHHHHHHHcC--CCEEEEecCCCCCCCCcCCCCCCCH----HHHHHHHHHHHhcCC-C
Q psy8693 36 YAVNIPLRDGMDDESYESIFVPIISKVMETFQ--PSAVVLQCGADSLTGDRLGCFNLTV----RGHGKCVEFVKRYNL-P 108 (282)
Q Consensus 36 ~~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~--Pd~ivv~~G~D~~~~Dplg~~~lt~----~~~~~~~~~~~~~~~-~ 108 (282)
-.|++.-..+.....+...+.+.+..++++|+ |+.|++..+ ..|.+. .+. +.|.++.+.||+.+. +
T Consensus 88 VIlDlH~~~g~~~~~~~~~~~~~w~~iA~ryk~~~~~Vi~eL~-----NEP~~~--~~~~~w~~~~~~~i~aIR~~dp~~ 160 (464)
T 1wky_A 88 AVLEVHDATGYDSIASLNRAVDYWIEMRSALIGKEDTVIINIA-----NEWFGS--WDGAAWADGYKQAIPRLRNAGLNN 160 (464)
T ss_dssp EEEEECTTTTCCCHHHHHHHHHHHHHTGGGTTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTTCCS
T ss_pred EEEEecCCCCCCChHHHHHHHHHHHHHHHHHcCCCCeEEEEec-----cCCCCC--CCHHHHHHHHHHHHHHHHhcCCCC
Confidence 33444433333334566777777778888886 566666544 667764 343 455667888888743 4
Q ss_pred EEEEeCCCCCc
Q psy8693 109 FLMVGGGGYTI 119 (282)
Q Consensus 109 ~~~v~eGGY~~ 119 (282)
+|++.+.+|+.
T Consensus 161 ~I~v~g~~w~~ 171 (464)
T 1wky_A 161 TLMIDAAGWGQ 171 (464)
T ss_dssp CEEEECBTTTT
T ss_pred EEEEcCCCcCc
Confidence 56666555654
No 162
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=21.20 E-value=2.7e+02 Score=24.73 Aligned_cols=37 Identities=14% Similarity=0.043 Sum_probs=22.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL 73 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv 73 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+
T Consensus 71 tlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVl 107 (334)
T 3t8b_A 71 AFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLL 107 (334)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 4565655466677777888788766544434446654
No 163
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=21.01 E-value=2.5e+02 Score=23.42 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=38.9
Q ss_pred EeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEec--------CCCCCCCCcCCCCCCCHH-------HHHHHHHHH
Q psy8693 38 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQC--------GADSLTGDRLGCFNLTVR-------GHGKCVEFV 102 (282)
Q Consensus 38 ~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~--------G~D~~~~Dplg~~~lt~~-------~~~~~~~~~ 102 (282)
+|=|=+..+=+.+.+..+.+.+..+-+.-+..+||+.. |.|.-. +.... ..+ .+..+.+.+
T Consensus 15 lnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~---~~~~~-~~~~~~~~~~~~~~~~~~i 90 (250)
T 2a7k_A 15 LDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNE---VKQLS-RSEDIEEWIDRVIDLYQAV 90 (250)
T ss_dssp ECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHH---HHTC--CHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHH---HhhcC-chhhHHHHHHHHHHHHHHH
Confidence 34343334445667777777776655544556777765 233211 10000 111 123445566
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 91 ~~~~kPvIAav~G 103 (250)
T 2a7k_A 91 LNVNKPTIAAVDG 103 (250)
T ss_dssp HTCCSCEEEEECS
T ss_pred HcCCCCEEEEECC
Confidence 7789999876643
No 164
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=21.01 E-value=81 Score=27.45 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=40.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCCCCcCCCCCCCH-------HHHHHHHHHH
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLTGDRLGCFNLTV-------RGHGKCVEFV 102 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~~Dplg~~~lt~-------~~~~~~~~~~ 102 (282)
++|=|=...+=+.+.+..+.+.+..+-+.-..-+||+. +|.|.-.- .. .-+. +.+..+.+.+
T Consensus 40 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~---~~-~~~~~~~~~~~~~~~~~~~~l 115 (286)
T 3myb_A 40 TLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEM---RA-EPSREYYEKLFARCTDVMLAI 115 (286)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHH---HS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhh---hc-cccHHHHHHHHHHHHHHHHHH
Confidence 45556544566777888888888665443344566664 33332110 00 0111 1233455667
Q ss_pred HhcCCCEEEEeCC
Q psy8693 103 KRYNLPFLMVGGG 115 (282)
Q Consensus 103 ~~~~~~~~~v~eG 115 (282)
..+.+|+|....|
T Consensus 116 ~~~~kPvIAav~G 128 (286)
T 3myb_A 116 QRLPAPVIARVHG 128 (286)
T ss_dssp HHSSSCEEEEECS
T ss_pred HcCCCCEEEEECC
Confidence 7789999877644
No 165
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.88 E-value=75 Score=26.49 Aligned_cols=23 Identities=22% Similarity=0.197 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCGA 77 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G~ 77 (282)
.+++.+...+++++||+||+ +||
T Consensus 69 ~~~~~~~~~l~~~~~Dliv~-a~y 91 (212)
T 3av3_A 69 AFESEILRELKGRQIDWIAL-AGY 91 (212)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-SSC
T ss_pred hhHHHHHHHHHhcCCCEEEE-chh
Confidence 44555567788999998876 563
No 166
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.84 E-value=79 Score=26.38 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 53 SIFVPIISKVMETFQPSAVVLQCGA 77 (282)
Q Consensus 53 ~~~~~~l~~~~~~f~Pd~ivv~~G~ 77 (282)
..+++.+...+++++||+|| .+||
T Consensus 66 ~~~~~~~~~~l~~~~~Dliv-~a~y 89 (216)
T 2ywr_A 66 KEFEERMALELKKKGVELVV-LAGF 89 (216)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-ESSC
T ss_pred hhhhHHHHHHHHhcCCCEEE-EeCc
Confidence 34555556778899999877 4564
No 167
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=20.83 E-value=1.2e+02 Score=24.21 Aligned_cols=24 Identities=17% Similarity=0.265 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Q psy8693 235 SYESIFVPIISKVMETFQPSAVVLQ 259 (282)
Q Consensus 235 ~y~~~~~~~~~~~~~~f~P~~ivvs 259 (282)
...... +.|...|++.+||+|.+|
T Consensus 24 ~~~~r~-~~i~~~i~~~~pDIi~LQ 47 (256)
T 4gz1_A 24 NLPERA-RGVCSCLALYSPDVVFLQ 47 (256)
T ss_dssp THHHHH-HHHHHHHHHHCCSEEEEE
T ss_pred CHHHHH-HHHHHHHHHcCCCEEEEE
Confidence 343444 345678889999999987
No 168
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=20.62 E-value=1.6e+02 Score=24.76 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=36.0
Q ss_pred CCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc---CCCEEEEeCCCC
Q psy8693 68 PSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY---NLPFLMVGGGGY 117 (282)
Q Consensus 68 Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~---~~~~~~v~eGGY 117 (282)
-..||+=.|--++.++. ...++.+-...+.+.++++ +.++++|.+||-
T Consensus 9 ~~riViKlGGs~l~~~~--~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~ 59 (243)
T 3ek6_A 9 YRRILLKLSGEALMGDG--DYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGN 59 (243)
T ss_dssp CSEEEEEECGGGGTTTS--SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred CcEEEEEEchhhccCCC--CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH
Confidence 36799999988887654 3568888888887777653 667888888764
No 169
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=20.58 E-value=3.8e+02 Score=22.86 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=25.1
Q ss_pred HHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCC
Q psy8693 64 ETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGG 116 (282)
Q Consensus 64 ~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~eGG 116 (282)
-+-+||+||.+... . ....+.+.+.++|++++-...
T Consensus 81 ~~l~PDlIi~~~~~-------------~----~~~~~~L~~~Gipvv~~~~~~ 116 (326)
T 3psh_A 81 LALKPDVVFVTNYA-------------P----SEMIKQISDVNIPVVAISLRT 116 (326)
T ss_dssp HHTCCSEEEEETTC-------------C----HHHHHHHHTTTCCEEEECSCC
T ss_pred HccCCCEEEEeCCC-------------C----hHHHHHHHHcCCCEEEEeccc
Confidence 37899999986321 1 235677788899999886543
No 170
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=20.56 E-value=54 Score=25.69 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=21.9
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCC
Q psy8693 222 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGA 262 (282)
Q Consensus 222 ~~N~pl~~g~~d~~y~~~~~~~~~~~~~~f~P~~ivvsaG~ 262 (282)
.+|..+...+ ..+.+..+++ .+.+++||+|+|+.|.
T Consensus 49 v~n~g~~G~~-~~~~~~~~~~----~~~~~~pd~vvi~~G~ 84 (204)
T 3p94_A 49 FVDRGISGQT-TSEMLVRFRQ----DVINLKPKAVVILAGI 84 (204)
T ss_dssp EEEEECTTCC-HHHHHHHHHH----HTGGGCEEEEEEECCH
T ss_pred eEEcccCccc-HHHHHHHHHH----HHHhCCCCEEEEEeec
Confidence 4566554333 3444444433 3346789999999986
No 171
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=20.33 E-value=1.3e+02 Score=24.98 Aligned_cols=22 Identities=14% Similarity=0.406 Sum_probs=17.0
Q ss_pred HHHHHc-CCCEEEEecCCCCCCC
Q psy8693 61 KVMETF-QPSAVVLQCGADSLTG 82 (282)
Q Consensus 61 ~~~~~f-~Pd~ivv~~G~D~~~~ 82 (282)
..++.+ +.|++++..|-|+|..
T Consensus 118 ~~i~~~~~~Dl~llGiG~dgh~a 140 (242)
T 2bkx_A 118 QLVDSLGDTDIQLLGIGRNGHIG 140 (242)
T ss_dssp HHHHHTTSCSEEEECCCTTSCBT
T ss_pred HHHHhcCCCCEEEECcCCCCcce
Confidence 334444 7899999999999865
No 172
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.32 E-value=83 Score=26.38 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC
Q psy8693 54 IFVPIISKVMETFQPSAVVLQCG 76 (282)
Q Consensus 54 ~~~~~l~~~~~~f~Pd~ivv~~G 76 (282)
.+++.+...+++++||+||+ +|
T Consensus 68 ~~d~~~~~~l~~~~~Dliv~-ag 89 (211)
T 3p9x_A 68 AYEIEVVQQLKEKQIDFVVL-AG 89 (211)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-SS
T ss_pred hhHHHHHHHHHhcCCCEEEE-eC
Confidence 44455567788999999876 45
No 173
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=20.19 E-value=4e+02 Score=22.58 Aligned_cols=57 Identities=9% Similarity=0.037 Sum_probs=37.6
Q ss_pred HHHHHHHcCCCEEEEecCC-CCCCCCcCCC----C-----CCCHHHHHHHHHHHHhcCCCEEEEeCC
Q psy8693 59 ISKVMETFQPSAVVLQCGA-DSLTGDRLGC----F-----NLTVRGHGKCVEFVKRYNLPFLMVGGG 115 (282)
Q Consensus 59 l~~~~~~f~Pd~ivv~~G~-D~~~~Dplg~----~-----~lt~~~~~~~~~~~~~~~~~~~~v~eG 115 (282)
+..++++..-.++.+.+++ +....+|... + .-+.+.+.++.+.+++++.+.|++..+
T Consensus 64 ~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~ 130 (303)
T 3l23_A 64 FKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM 130 (303)
T ss_dssp HHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred HHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4466778888888877776 4445566531 1 122455666777788889999988643
No 174
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=20.12 E-value=2.3e+02 Score=22.64 Aligned_cols=53 Identities=6% Similarity=0.040 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEe
Q psy8693 57 PIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVG 113 (282)
Q Consensus 57 ~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~ 113 (282)
+.+..++++++|++||+-.=......|+- -..+....+.+.+++.+.+++++.
T Consensus 118 ~~i~~~~~~~~~~~vviD~~~~l~~~~~~----~~~~~l~~l~~~~~~~~~~vi~~~ 170 (247)
T 2dr3_A 118 EVLRQAIRDINAKRVVVDSVTTLYINKPA----MARSIILQLKRVLAGTGCTSIFVS 170 (247)
T ss_dssp HHHHHHHHHHTCCEEEEETSGGGTTTCGG----GHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEECCchHhhcCCHH----HHHHHHHHHHHHHHHCCCeEEEEe
Confidence 44556677899999987542222222321 113344455666667788777764
No 175
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=20.08 E-value=26 Score=31.24 Aligned_cols=47 Identities=9% Similarity=0.151 Sum_probs=27.6
Q ss_pred HcCCCEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc--CCCEEEE
Q psy8693 65 TFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY--NLPFLMV 112 (282)
Q Consensus 65 ~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~--~~~~~~v 112 (282)
.++||+|||..|..=..... ....--.+.|..+++.+++. +.+|+++
T Consensus 223 ~~~Pd~VvI~lG~ND~~~~~-~~~~~~~~~l~~li~~ir~~~p~~~I~l~ 271 (347)
T 2waa_A 223 RYQPDLIISAIGTNDFSPGI-PDRATYINTYTRFVRTLLDNHPQATIVLT 271 (347)
T ss_dssp GCCCSEEEECCCHHHHSSSC-CCHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCCCCEEEEEccccCCCCCC-CcHHHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 67999999999974222211 00001135677778888775 3455444
No 176
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=20.07 E-value=3.2e+02 Score=23.20 Aligned_cols=76 Identities=9% Similarity=-0.020 Sum_probs=41.8
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEe-------cCCCCCC-----CCcCCCCCCCHHHHHHHHHHHHh
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQ-------CGADSLT-----GDRLGCFNLTVRGHGKCVEFVKR 104 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~-------~G~D~~~-----~Dplg~~~lt~~~~~~~~~~~~~ 104 (282)
++|=|=...+=+.+.+..+.+.+..+-+. ..-+||+. +|.|.-. .++-. ..-..+.+..+.+.+..
T Consensus 21 tlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 98 (267)
T 3hp0_A 21 TFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK-QASSQEPLYDLWMKLQT 98 (267)
T ss_dssp EECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC-SCCCCHHHHHHHHHHHH
T ss_pred EECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH-HHHHHHHHHHHHHHHHc
Confidence 45555444555667777777777665442 44566663 3334211 01111 11123455667778888
Q ss_pred cCCCEEEEeC
Q psy8693 105 YNLPFLMVGG 114 (282)
Q Consensus 105 ~~~~~~~v~e 114 (282)
+.+|+|....
T Consensus 99 ~~kPvIAav~ 108 (267)
T 3hp0_A 99 GPYVTISHVR 108 (267)
T ss_dssp SSSEEEEEEC
T ss_pred CCCCEEEEEC
Confidence 8999887654
No 177
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=20.05 E-value=64 Score=25.57 Aligned_cols=66 Identities=14% Similarity=0.048 Sum_probs=36.1
Q ss_pred EEeecCCCCCChhHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCcCCCCCCCHHH----HHHHHHHHHhcC--CCEE
Q psy8693 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRG----HGKCVEFVKRYN--LPFL 110 (282)
Q Consensus 37 ~~NiPl~~g~~d~~y~~~~~~~l~~~~~~f~Pd~ivv~~G~D~~~~Dplg~~~lt~~~----~~~~~~~~~~~~--~~~~ 110 (282)
.+|..+... +-...+..+++ .+...+||+||++.|.. |-.. ..+.+. +..+++.+++.+ .+++
T Consensus 60 v~n~g~~G~-~~~~~~~~l~~----~~~~~~pd~vvi~~G~N----D~~~--~~~~~~~~~~l~~~i~~l~~~~p~~~ii 128 (214)
T 2hsj_A 60 IVNRGIRGY-QTGLLLENLDA----HLYGGAVDKIFLLIGTN----DIGK--DVPVNEALNNLEAIIQSVARDYPLTEIK 128 (214)
T ss_dssp EEEEECTTC-CHHHHHHTGGG----GCCCSCCCEEEEECCHH----HHHT--TCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred EEecCccch-hHHHHHHHhhH----HHHhcCCCEEEEEEecC----cCCc--CCCHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 347766533 33334333332 23367999999999962 2211 234444 445566666654 5555
Q ss_pred EEe
Q psy8693 111 MVG 113 (282)
Q Consensus 111 ~v~ 113 (282)
++.
T Consensus 129 l~~ 131 (214)
T 2hsj_A 129 LLS 131 (214)
T ss_dssp EEC
T ss_pred EEe
Confidence 554
No 178
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=20.02 E-value=1.8e+02 Score=24.38 Aligned_cols=48 Identities=17% Similarity=0.285 Sum_probs=35.9
Q ss_pred CEEEEecCCCCCCCCcCCCCCCCHHHHHHHHHHHHhc---CCCEEEEeCCCCC
Q psy8693 69 SAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY---NLPFLMVGGGGYT 118 (282)
Q Consensus 69 d~ivv~~G~D~~~~Dplg~~~lt~~~~~~~~~~~~~~---~~~~~~v~eGGY~ 118 (282)
..||+-.|--++.++. ...++.+-...+.+.+..+ +.++++|.+||--
T Consensus 9 k~iViKlGGs~l~~~~--~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~ 59 (247)
T 2a1f_A 9 KRILLKLSGEALQGED--GLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNL 59 (247)
T ss_dssp SEEEEEECGGGGCCTT--SSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred cEEEEEEChhhhCCCC--CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChH
Confidence 5799999988887642 3457888888887777653 5688888888654
No 179
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=20.01 E-value=36 Score=28.64 Aligned_cols=54 Identities=7% Similarity=0.167 Sum_probs=32.2
Q ss_pred HHHHHHcCCCEEEEecCCCCCC---CCcCCCCCCCHHHHHHHHHHHHhcCCCEEEEe
Q psy8693 60 SKVMETFQPSAVVLQCGADSLT---GDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVG 113 (282)
Q Consensus 60 ~~~~~~f~Pd~ivv~~G~D~~~---~Dplg~~~lt~~~~~~~~~~~~~~~~~~~~v~ 113 (282)
..+++..++|+||-.+|.-... .++...+.....+-..+.+.+++.+.++|.+-
T Consensus 49 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~S 105 (287)
T 3sc6_A 49 QQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYIS 105 (287)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 3444556999999999865421 23322233333445566777777777766554
Done!