Your job contains 1 sequence.
>psy8693
MYLLNTNANFIVNDRDQTWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIIS
KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIR
NVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRL
FENLRMLPHAPGVQVQVSPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMDDESYESIF
VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCSG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8693
(282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 875 1.4e-87 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 820 9.4e-82 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 813 5.2e-81 1
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s... 813 5.2e-81 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 813 5.2e-81 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 813 5.2e-81 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 813 5.2e-81 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 813 5.2e-81 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 813 5.2e-81 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 808 1.8e-80 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 808 1.8e-80 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 808 1.8e-80 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 807 2.2e-80 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 807 2.2e-80 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 807 2.2e-80 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 807 2.2e-80 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 807 2.2e-80 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 807 2.2e-80 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 807 2.2e-80 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 807 2.2e-80 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 803 6.0e-80 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 800 1.2e-79 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 789 1.8e-78 1
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie... 728 5.3e-72 1
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp... 689 7.2e-68 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 675 2.2e-66 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 669 9.4e-66 1
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 652 6.0e-64 1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 621 2.6e-63 2
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 632 7.9e-62 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 632 7.9e-62 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 627 2.7e-61 1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 623 7.1e-61 1
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 616 3.9e-60 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 614 6.4e-60 1
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species... 614 6.4e-60 1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe... 614 6.4e-60 1
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s... 614 6.4e-60 1
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 611 1.3e-59 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 611 1.3e-59 1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 611 1.3e-59 1
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe... 611 1.3e-59 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 610 1.7e-59 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 606 4.5e-59 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 606 4.5e-59 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 602 1.2e-58 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 596 5.1e-58 1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 575 8.6e-56 1
TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ... 573 1.4e-55 1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 568 4.8e-55 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 568 4.8e-55 1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 562 2.1e-54 1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s... 527 1.1e-50 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 494 3.3e-47 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 485 3.0e-46 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 485 3.0e-46 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 458 2.2e-43 1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric... 422 1.4e-39 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 407 5.5e-38 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 406 7.0e-38 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 406 7.0e-38 1
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si... 405 8.9e-38 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 405 8.9e-38 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 398 4.9e-37 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 397 6.3e-37 1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 388 5.7e-36 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 379 5.1e-35 1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 389 1.1e-34 1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"... 364 2.0e-33 1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s... 344 2.6e-31 1
RGD|619976 - symbol:Hdac2 "histone deacetylase 2" species... 337 1.4e-30 1
TAIR|locus:2076053 - symbol:hda17 "histone deacetylase 17... 331 6.2e-30 1
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s... 325 2.7e-29 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 319 1.2e-28 1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s... 318 1.5e-28 1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p... 318 1.5e-28 1
TAIR|locus:2098105 - symbol:hda10 "histone deacetylase 10... 250 2.4e-21 1
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica... 228 1.9e-18 1
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas... 228 1.9e-18 1
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s... 214 1.6e-17 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 182 5.5e-12 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 182 5.5e-12 1
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase... 178 2.8e-11 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 121 7.9e-11 2
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 121 8.0e-11 2
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 121 8.0e-11 2
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 155 9.8e-11 2
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ... 165 6.1e-10 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 164 1.9e-09 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 139 8.9e-08 2
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 144 6.7e-07 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 144 6.7e-07 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 118 6.8e-07 2
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 109 3.5e-06 2
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s... 124 7.6e-06 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 113 7.6e-06 2
UNIPROTKB|A6ND61 - symbol:HDAC8 "Histone deacetylase 8" s... 108 1.1e-05 1
UNIPROTKB|I3LHJ7 - symbol:I3LHJ7 "Uncharacterized protein... 107 1.4e-05 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 111 1.9e-05 2
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 111 2.0e-05 2
WARNING: Descriptions of 7 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 161/176 (91%), Positives = 168/176 (95%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVNIPLRDGMDD++YESIFVPIISKVMETFQP+AVVLQCGADSLTGD
Sbjct: 208 DLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGD 267
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GHGKCVEFVK+YNLPFLMVGGGGYTIRNVSRCWTYETSVAL EIANELP
Sbjct: 268 RLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELP 327
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 328 YNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIP 383
Score = 337 (123.7 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 63/68 (92%), Positives = 68/68 (100%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVNIPLRDGMDD++YESIFVPIISKVMETFQP+AVVLQCGADSLTGDRL
Sbjct: 210 RDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRL 269
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 270 GCFNLTVK 277
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 149/176 (84%), Positives = 163/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P+ISKVMETFQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIP 385
Score = 319 (117.4 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 58/68 (85%), Positives = 66/68 (97%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P+ISKVMETFQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 310 (114.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 17 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 76
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 77 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 136
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 137 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 192
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 19 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 78
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 79 GCFNLTIK 86
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 310 (114.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 120 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 179
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 180 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 239
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 240 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 295
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 122 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 181
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 182 GCFNLTIK 189
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 217 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 276
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 277 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 336
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 337 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 392
Score = 310 (114.2 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 219 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 278
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 279 GCFNLTIK 286
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 310 (114.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 147/176 (83%), Positives = 162/176 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NELP
Sbjct: 270 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 329
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 330 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 385
Score = 310 (114.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 272 GCFNLTIK 279
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 148/177 (83%), Positives = 163/177 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVR-GHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANEL 142
RLGCFNLT++ GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NEL
Sbjct: 270 RLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 329
Query: 143 PYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
PYNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+QV P
Sbjct: 330 PYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIP 386
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 56/69 (81%), Positives = 66/69 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVRD 279
GCFNLT+++
Sbjct: 272 GCFNLTIKE 280
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 148/177 (83%), Positives = 163/177 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVR-GHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANEL 142
RLGCFNLT++ GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NEL
Sbjct: 270 RLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 329
Query: 143 PYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
PYNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+QV P
Sbjct: 330 PYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIP 386
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 56/69 (81%), Positives = 66/69 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVRD 279
GCFNLT+++
Sbjct: 272 GCFNLTIKE 280
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 148/177 (83%), Positives = 163/177 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GD
Sbjct: 210 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 269
Query: 84 RLGCFNLTVR-GHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANEL 142
RLGCFNLT++ GH KCVEFVK +NLP LM+GGGGYTIRNV+RCWTYET+VAL +EI NEL
Sbjct: 270 RLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 329
Query: 143 PYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
PYNDYFEYFGPDFKLHISPSNM NQNT EYLEKIK RLFENLRMLPHAPGVQ+QV P
Sbjct: 330 PYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIP 386
Score = 312 (114.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 56/69 (81%), Positives = 66/69 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRL
Sbjct: 212 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 271
Query: 271 GCFNLTVRD 279
GCFNLT+++
Sbjct: 272 GCFNLTIKE 280
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 306 (112.8 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 306 (112.8 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 306 (112.8 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 181 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 240
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 241 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 300
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 301 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 356
Score = 306 (112.8 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 183 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 242
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 243 GCFNLTVK 250
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 181 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 240
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 241 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 300
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 301 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 356
Score = 306 (112.8 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 183 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 242
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 243 GCFNLTVK 250
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 305 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 364
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 365 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 424
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 425 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 480
Score = 306 (112.8 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 307 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 366
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 367 GCFNLTVK 374
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 306 (112.8 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/176 (83%), Positives = 159/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 273 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 332
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 333 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 392
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 393 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 448
Score = 306 (112.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 275 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 334
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 335 GCFNLTVK 342
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 146/176 (82%), Positives = 158/176 (89%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLTV+GH KCVE K +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 RLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 306 (112.8 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF PIISKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLTV+
Sbjct: 273 GCFNLTVK 280
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 142/176 (80%), Positives = 161/176 (91%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESY+ IF PI+ KVME +QPSA+ LQCGADSL+GD
Sbjct: 209 DLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGD 268
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVEF+K+YNLP L++GGGGYTIRNV+RCWTYETS ALG EIANELP
Sbjct: 269 RLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELP 328
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNT EYL+KIKTRL+EN+RM+PHAPGVQ+Q P
Sbjct: 329 YNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIP 384
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 53/68 (77%), Positives = 62/68 (91%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESY+ IF PI+ KVME +QPSA+ LQCGADSL+GDRL
Sbjct: 211 RDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRL 270
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 271 GCFNLTLK 278
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 142/176 (80%), Positives = 160/176 (90%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN PLRDG+DDESYE+IF PI+SKVME +QPSAVVLQCGADSL+GD
Sbjct: 211 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH KCVE++K +NLP LM+GGGGYTI+NV+RCWT+ET+VAL S I NELP
Sbjct: 271 RLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIKNVARCWTFETAVALDSTIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISP NM NQNT +YLEKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 311 (114.5 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 57/68 (83%), Positives = 65/68 (95%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN PLRDG+DDESYE+IF PI+SKVME +QPSAVVLQCGADSL+GDRL
Sbjct: 213 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRL 272
Query: 271 GCFNLTVR 278
GCFNLT++
Sbjct: 273 GCFNLTIK 280
>RGD|1309799 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
differentiation" evidence=ISO] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
development" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034599 "cellular response to oxidative stress" evidence=IDA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=ISO] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
Length = 256
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 131/161 (81%), Positives = 145/161 (90%)
Query: 39 NIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKC 98
N PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRLGCFNLT++GH KC
Sbjct: 1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 60
Query: 99 VEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLH 158
VEFVK +NLP LM+GG GYTI NV+RCWTYET+VAL +EI NELPYNDYFEYFGPDFKLH
Sbjct: 61 VEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 120
Query: 159 ISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
ISPSNM NQNT EYLEKIK RLFENLRMLPH PGVQ+Q P
Sbjct: 121 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIP 161
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 44/55 (80%), Positives = 52/55 (94%)
Query: 224 NIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVR 278
N PLRDG+DDESYE+IF P++SKVME FQPSAVVLQCG+DSL+GDRLGCFNLT++
Sbjct: 1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIK 55
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/192 (69%), Positives = 155/192 (80%)
Query: 8 ANFIVNDRDQTWDLLHDKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQ 67
A++++ + + D +DIGAGKGKYYA+N PLRD +DDES E+IF P++SKVME
Sbjct: 178 ADWVMTVSFHNFPVTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME--- 234
Query: 68 PSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWT 127
PSAVVLQCG+DSL+GD LG FNLT++GH KCV FVK +NLP LM+ GGGYTI NV+RCWT
Sbjct: 235 PSAVVLQCGSDSLSGDWLGSFNLTIKGH-KCVGFVKSFNLPMLMLRGGGYTIHNVARCWT 293
Query: 128 YETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
YET+V L +EI NELPYNDYFEYFGPDFKLHISPSN NQNT EYLE IK RLFENLRML
Sbjct: 294 YETAVTLDTEIPNELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYLE-IKQRLFENLRML 352
Query: 188 PHAPGVQVQVSP 199
PH P VQ+Q P
Sbjct: 353 PHVPEVQMQAIP 364
Score = 251 (93.4 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 51/74 (68%), Positives = 61/74 (82%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYA+N PLRD +DDES E+IF P++SKVME PSAVVLQCG+DSL+GD L
Sbjct: 196 RDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME---PSAVVLQCGSDSLSGDWL 252
Query: 271 GCFNLTVRD--CSG 282
G FNLT++ C G
Sbjct: 253 GSFNLTIKGHKCVG 266
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 125/176 (71%), Positives = 141/176 (80%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGKYYAVN P+RDG+DDESY IF P+I+K+ E P+ V L+ GD
Sbjct: 211 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGD 270
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ F V+GH KCVE VK +NLP LM+GGGGYTIRNV+RCWTYET+VAL EI NELP
Sbjct: 271 QFWVFVYCVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 330
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRMLPHAPGVQ+Q P
Sbjct: 331 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 386
Score = 174 (66.3 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGKYYAVN P+RDG+DDESY IF P+I+K+ E P+ V L+ GD+
Sbjct: 213 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGDQF 272
Query: 271 GCFNLTVR 278
F V+
Sbjct: 273 WVFVYCVK 280
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 113/168 (67%), Positives = 147/168 (87%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGA KGKYY++N PL+DG+DDESY+SIF PII VM+ ++P AVV+QCGADSLTGD
Sbjct: 205 DVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT+RGH +C+EF+K +N+P +++GGGGYTI+NV+RCWTYETS+ + SE+ +ELP
Sbjct: 265 RLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELP 324
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAP 191
YNDY EY+GP+++LHI+P+NM NQNT +YLEK+K +L ENLR L HAP
Sbjct: 325 YNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAP 372
Score = 279 (103.3 bits), Expect = 7.0e-24, P = 7.0e-24
Identities = 50/68 (73%), Positives = 61/68 (89%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGA KGKYY++N PL+DG+DDESY+SIF PII VM+ ++P AVV+QCGADSLTGDRL
Sbjct: 207 KDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRL 266
Query: 271 GCFNLTVR 278
GCFNLT+R
Sbjct: 267 GCFNLTLR 274
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 115/188 (61%), Positives = 149/188 (79%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+D+GA KGKYYA+N+PL DGMDDES+ S+F P+I KVME +QP AVVLQCGADSL+GDRL
Sbjct: 224 RDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRL 283
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+V+GH C+ F++ YN+P +++GGGGYTIRNV+RCW YET+VA+G E N+LPYN
Sbjct: 284 GCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN 343
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGPIL 205
+YFEYFGPD+ LH+ PS M N NTP+ +E+I+ L E L L HAP VQ Q +P + +L
Sbjct: 344 EYFEYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVL 403
Query: 206 WYDPYQDI 213
+P D+
Sbjct: 404 -DEPEDDM 410
Score = 286 (105.7 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 52/73 (71%), Positives = 63/73 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+D+GA KGKYYA+N+PL DGMDDES+ S+F P+I KVME +QP AVVLQCGADSL+GDRL
Sbjct: 224 RDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRL 283
Query: 271 GCFNLTVR---DC 280
GCFNL+V+ DC
Sbjct: 284 GCFNLSVKGHADC 296
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 621 (223.7 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 108/174 (62%), Positives = 139/174 (79%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG G+GKYYAVN PLRDG+DD SY+SIF P+I VME ++P AVVLQCG DSL+GDRL
Sbjct: 229 RDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRL 288
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL++RGH CV++VK +NLP L+VGGGGYT+RNV+R W +ET + +G + +ELPYN
Sbjct: 289 GCFNLSMRGHANCVKYVKSFNLPTLIVGGGGYTMRNVARTWAFETGILVGDNLGSELPYN 348
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
DY+EYF PD++L + PSNM N NT EYL+KI+T++ ENL+ AP VQ+ P
Sbjct: 349 DYYEYFAPDYELDVRPSNMDNANTREYLDKIRTQVVENLKRTAFAPSVQMTDVP 402
Score = 273 (101.2 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 49/68 (72%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG G+GKYYAVN PLRDG+DD SY+SIF P+I VME ++P AVVLQCG DSL+GDRL
Sbjct: 229 RDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRL 288
Query: 271 GCFNLTVR 278
GCFNL++R
Sbjct: 289 GCFNLSMR 296
Score = 43 (20.2 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 226 PLRDGMDDES 235
PL DGMDDE+
Sbjct: 405 PLVDGMDDEA 414
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 112/176 (63%), Positives = 140/176 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GD
Sbjct: 214 DLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLG FNLT++GHG+C F + YN+P +MVGGGGYT RNV+RCWTYETS+A+ E+ NELP
Sbjct: 274 RLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELP 333
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGP+++LHI SN AN+N+ + L K++T + NL L P VQ++ P
Sbjct: 334 YNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIP 389
Score = 265 (98.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 50/68 (73%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GDRL
Sbjct: 216 KDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRL 275
Query: 271 GCFNLTVR 278
G FNLT++
Sbjct: 276 GPFNLTLK 283
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 112/176 (63%), Positives = 140/176 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GD
Sbjct: 214 DLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLG FNLT++GHG+C F + YN+P +MVGGGGYT RNV+RCWTYETS+A+ E+ NELP
Sbjct: 274 RLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELP 333
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
YNDYFEYFGP+++LHI SN AN+N+ + L K++T + NL L P VQ++ P
Sbjct: 334 YNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIP 389
Score = 265 (98.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 50/68 (73%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIGAGKGK Y+VN+PLRDG+ D SY+SIF PI++KVME F P AVVLQCGADSL GDRL
Sbjct: 216 KDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRL 275
Query: 271 GCFNLTVR 278
G FNLT++
Sbjct: 276 GPFNLTLK 283
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 110/174 (63%), Positives = 141/174 (81%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +D+GAG GKYYA+N+PLRDG+DD +YE IF I+ +VM FQP AVVLQCGADSL GD
Sbjct: 209 DLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGD 268
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLG FNLT GHGKCVE++K +N+P L+VGGGGYTIRNVSRCW YET++AL E++++LP
Sbjct: 269 RLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLP 328
Query: 144 YNDYFEYFGPDFKLHISP-SNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ 196
+DYF+YF PD+KLHI P + ++N NTPE++++ L ENL+ LPH P VQ+Q
Sbjct: 329 LHDYFDYFIPDYKLHIKPLAALSNFNTPEFIDQTIVALLENLKQLPHVPSVQMQ 382
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 47/66 (71%), Positives = 55/66 (83%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+D+GAG GKYYA+N+PLRDG+DD +YE IF I+ +VM FQP AVVLQCGADSL GDRL
Sbjct: 211 KDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRL 270
Query: 271 GCFNLT 276
G FNLT
Sbjct: 271 GVFNLT 276
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 106/174 (60%), Positives = 141/174 (81%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
QDIG G GKYY++N+PL DG+DDESY +F PI+ KVME F+P AVVLQCGADSL+GDRL
Sbjct: 220 QDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRL 279
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+++GH +CV+F++ +N+P L++GGGGYTIRNV+RCW YET VALG E+ +++P +
Sbjct: 280 GCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEH 339
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ L NL L HAP V Q P
Sbjct: 340 EYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERP 393
Score = 272 (100.8 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
QDIG G GKYY++N+PL DG+DDESY +F PI+ KVME F+P AVVLQCGADSL+GDRL
Sbjct: 220 QDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRL 279
Query: 271 GCFNLTVR 278
GCFNL+++
Sbjct: 280 GCFNLSIK 287
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 106/186 (56%), Positives = 148/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YYA+N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--S 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLSYD 388
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 42/71 (59%), Positives = 61/71 (85%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YYA+N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGR 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 106/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 246 (91.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 106/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 106/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 106/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+IS+V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 105/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--S 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLSYD 388
Score = 243 (90.6 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 41/71 (57%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 105/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 243 (90.6 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 41/71 (57%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 105/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 243 (90.6 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 41/71 (57%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 105/186 (56%), Positives = 147/186 (79%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELP
Sbjct: 265 RLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIG 202
Y++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--A 382
Query: 203 PILWYD 208
+L YD
Sbjct: 383 DLLTYD 388
Score = 243 (90.6 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 41/71 (57%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 104/174 (59%), Positives = 135/174 (77%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+D G G GK YAVN+PLRDG+DDESYES+F P+IS +M+ F+P AV+LQCG DSL GDRL
Sbjct: 209 KDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRL 268
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL+++GH CV+FVK +NLP + VGGGGYT+RNV+R WTYET + G E+ LPYN
Sbjct: 269 GCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDENLPYN 328
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
DY +Y+GPD+KL++ +NM N NT +YL+ I + + ENLR L AP VQ+ +P
Sbjct: 329 DYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTP 382
Score = 266 (98.7 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 46/68 (67%), Positives = 58/68 (85%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+D G G GK YAVN+PLRDG+DDESYES+F P+IS +M+ F+P AV+LQCG DSL GDRL
Sbjct: 209 KDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRL 268
Query: 271 GCFNLTVR 278
GCFNL+++
Sbjct: 269 GCFNLSMK 276
Score = 37 (18.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 48 DESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
DE E ++ + ME FQP + G D D L
Sbjct: 67 DEYIEFLW-RVTPDTMEKFQPHQLKFNVGDDCPVFDGL 103
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG GKGKY++VN+PLRDG+DD +Y+S+F P+ISK++E +QPSA+VLQCG DSL+GDRL
Sbjct: 221 RDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRL 280
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL++ GH C+ +VK +N+P ++VGGGGYT+RNV+R W YE+ + ++ +ELPYN
Sbjct: 281 GCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYN 340
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EY+GPD+KL + SNM NQN+PE+L+KI T + NL HAP VQ+ P
Sbjct: 341 EYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNIIANLENTKHAPSVQMNEVP 394
Score = 275 (101.9 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 46/67 (68%), Positives = 62/67 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG GKGKY++VN+PLRDG+DD +Y+S+F P+ISK++E +QPSA+VLQCG DSL+GDRL
Sbjct: 221 RDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRL 280
Query: 271 GCFNLTV 277
GCFNL++
Sbjct: 281 GCFNLSM 287
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG GKGKY++VN+PLRDG+DD +Y+S+F P+ISK++E +QPSA+VLQCG DSL+GDRL
Sbjct: 221 RDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRL 280
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL++ GH C+ +VK +N+P ++VGGGGYT+RNV+R W YE+ + ++ +ELPYN
Sbjct: 281 GCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYN 340
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EY+GPD+KL + SNM NQN+PE+L+KI T + NL HAP VQ+ P
Sbjct: 341 EYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNIIANLENTKHAPSVQMNEVP 394
Score = 275 (101.9 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 46/67 (68%), Positives = 62/67 (92%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG GKGKY++VN+PLRDG+DD +Y+S+F P+ISK++E +QPSA+VLQCG DSL+GDRL
Sbjct: 221 RDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRL 280
Query: 271 GCFNLTV 277
GCFNL++
Sbjct: 281 GCFNLSM 287
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 102/177 (57%), Positives = 142/177 (80%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL D
Sbjct: 205 DMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCD 264
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++RGHG+CVEFVK + +P L++GGGGYT+RNV+RCWT+ETS+ + I++ELP
Sbjct: 265 RLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELP 324
Query: 144 YNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
Y++YFEYF PDF LH S + NQN+ +YLE+I+ +FENL+ML HAP VQ++ P
Sbjct: 325 YSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVP 381
Score = 242 (90.2 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY +F P+I +V++ +QP+ +VLQCGADSL
Sbjct: 205 DMYE-VGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGC 263
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 264 DRLGCFNLSIR 274
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 101/174 (58%), Positives = 134/174 (77%)
Query: 26 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
+DIG G GK YAVN+PLRDG+DD +Y S+F P+I K+ME +QPSAVVLQCG DSL+GDRL
Sbjct: 222 RDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRL 281
Query: 86 GCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYN 145
GCFNL++ GH CV +VK + +P ++VGGGGYT+RNV+R W +ET + + +LPYN
Sbjct: 282 GCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYN 341
Query: 146 DYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+Y+EY+GPD+KL + PSNM N NTPEYL+K+ T +F NL +AP VQ+ +P
Sbjct: 342 EYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTP 395
Score = 268 (99.4 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
+DIG G GK YAVN+PLRDG+DD +Y S+F P+I K+ME +QPSAVVLQCG DSL+GDRL
Sbjct: 222 RDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRL 281
Query: 271 GCFNLTV 277
GCFNL++
Sbjct: 282 GCFNLSM 288
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 105/186 (56%), Positives = 139/186 (74%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +IGA GK Y+VN+PL DG+DD++Y +IF P+I VM+ ++PS +VLQCGADSL D
Sbjct: 214 DIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFD 273
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNLT++GH +CV FVK +N+P L++GGGGYT+RNV+RCWTYETSV + +E+ NELP
Sbjct: 274 RLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNELP 333
Query: 144 YNDYFEYFGPDFKLHIS----PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ-VS 198
YNDY +++ PDF+L P N NT YLE ++ ++ ENLR+L AP VQ+Q V
Sbjct: 334 YNDYIQFYSPDFQLIPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVP 393
Query: 199 PIIGPI 204
P I PI
Sbjct: 394 PDIMPI 399
Score = 231 (86.4 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+IGA GK Y+VN+PL DG+DD++Y +IF P+I VM+ ++PS +VLQCGADSL DRLG
Sbjct: 217 EIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLG 276
Query: 272 CFNLTVR 278
CFNLT++
Sbjct: 277 CFNLTIK 283
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 99/176 (56%), Positives = 132/176 (75%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++IG +GK+YA+N+PL+DG+DD S+ +F IISKV+E +QP A+VLQCGADSL D
Sbjct: 207 DVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARD 266
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCFNL++ GH +CV+FVK++NLP L+ GGGGYT NV+RCWT ET + L +E+ NE+P
Sbjct: 267 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
NDY +YF PDF L I ++ N NT Y+ IK ++ ENLR + HAP VQ+Q P
Sbjct: 327 ENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 382
Score = 238 (88.8 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 270
++IG +GK+YA+N+PL+DG+DD S+ +F IISKV+E +QP A+VLQCGADSL DRL
Sbjct: 209 KEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRL 268
Query: 271 GCFNLTV 277
GCFNL++
Sbjct: 269 GCFNLSI 275
Score = 43 (20.2 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 161 PSNMANQNTPEYLEKIKTRLFENLRMLPH 189
P MA ++P+Y+E ++ EN + P+
Sbjct: 57 PIEMAQFHSPDYVEFLQRINPENQNLFPN 85
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 100/174 (57%), Positives = 131/174 (75%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
DIG GKGKY+A+NIPLRDG+DD SY+SIF PII+K+ME +QPSA+VLQCG DSL+GDRLG
Sbjct: 221 DIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLG 280
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
FNL++RGH CV FV+ +P +++GGGGYTIRNV+R W +ET V G + ELPYN
Sbjct: 281 PFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYNG 340
Query: 147 YFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPI 200
Y+EY+ P ++L + +NM N N+ EYL+KI T++ NL H P VQ+ P+
Sbjct: 341 YYEYYAPTYELDVRSANMTNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPL 394
Score = 275 (101.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
DIG GKGKY+A+NIPLRDG+DD SY+SIF PII+K+ME +QPSA+VLQCG DSL+GDRLG
Sbjct: 221 DIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLG 280
Query: 272 CFNLTVR 278
FNL++R
Sbjct: 281 PFNLSMR 287
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 100/174 (57%), Positives = 131/174 (75%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
DIG GKGKY+A+NIPLRDG+DD SY+SIF PII+K+ME +QPSA+VLQCG DSL+GDRLG
Sbjct: 221 DIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLG 280
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
FNL++RGH CV FV+ +P +++GGGGYTIRNV+R W +ET V G + ELPYN
Sbjct: 281 PFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYNG 340
Query: 147 YFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPI 200
Y+EY+ P ++L + +NM N N+ EYL+KI T++ NL H P VQ+ P+
Sbjct: 341 YYEYYAPTYELDVRSANMTNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPL 394
Score = 275 (101.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 50/67 (74%), Positives = 61/67 (91%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
DIG GKGKY+A+NIPLRDG+DD SY+SIF PII+K+ME +QPSA+VLQCG DSL+GDRLG
Sbjct: 221 DIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLG 280
Query: 272 CFNLTVR 278
FNL++R
Sbjct: 281 PFNLSMR 287
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 98/178 (55%), Positives = 137/178 (76%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +IGA G+YY+VN+PL++G+DD+SY +F PIIS +M+ ++P+A+VLQCGADSL GD
Sbjct: 210 DMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAGD 269
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
RLGCF+L+ +GHG+CV+FVK N+P L+VGGGGYT+RNV+RCWT+ETS+ + +I N+LP
Sbjct: 270 RLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDLP 329
Query: 144 YNDYFEYFGPDFKLHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQ-VQVSP 199
+Y+++F PDF LH S N N+ +YLE I ++ENL+M H+P VQ VQ P
Sbjct: 330 ATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPP 387
Score = 244 (91.0 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ IGA G+YY+VN+PL++G+DD+SY +F PIIS +M+ ++P+A+VLQCGADSL G
Sbjct: 210 DMYE-IGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAG 268
Query: 268 DRLGCFNLTVR 278
DRLGCF+L+ +
Sbjct: 269 DRLGCFSLSTK 279
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 87/176 (49%), Positives = 128/176 (72%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D G GKG+YY++N PL+DG+DD S +F+P+I + ME ++P +VLQCGADSL GD
Sbjct: 213 DISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
G FNL+++GHG C+++V+ +N+P +++GGGGYT+ NV+RCW YET++A+G ++ N+LP
Sbjct: 273 PFGTFNLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
NDY +YF PD+KLHI P+N N NT + ++ L L ++ HAP V Q +P
Sbjct: 333 GNDYMKYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTP 388
Score = 223 (83.6 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G GKG+YY++N PL+DG+DD S +F+P+I + ME ++P +VLQCGADSL GD G
Sbjct: 216 DYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFG 275
Query: 272 CFNLTVR---DC 280
FNL+++ DC
Sbjct: 276 TFNLSIKGHGDC 287
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 91/173 (52%), Positives = 121/173 (69%)
Query: 29 GAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCF 88
G GKY+A+N+PL DG+ DE Y S+F II + TFQPSA+VLQCGADSL DRLG F
Sbjct: 233 GVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVF 292
Query: 89 NLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND-Y 147
NL++ HG+CV F + +N+P L+VGGGGYT+RNV+R W YETS+ + +I +ELP Y
Sbjct: 293 NLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRETLY 352
Query: 148 FEYFGPDFKLHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+E+F PD+ LH + + N+NTP+ LE ++ R E LR L AP VQ+Q P
Sbjct: 353 YEFFAPDYTLHPRLTTKIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIP 405
Score = 211 (79.3 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 210 YQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDR 269
+ + G GKY+A+N+PL DG+ DE Y S+F II + TFQPSA+VLQCGADSL DR
Sbjct: 229 FDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDR 288
Query: 270 LGCFNLTV 277
LG FNL++
Sbjct: 289 LGVFNLSI 296
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 87/175 (49%), Positives = 123/175 (70%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
++G G GK YA+N+PLRDG+DDESY +F I+ ++ FQP+ +V QCGADSL DRLG
Sbjct: 241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP-YN 145
CFNL +R HG+CV+F+K + +P L+VGGGGYT RNVSR W YETSV + +++P Y
Sbjct: 301 CFNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYL 360
Query: 146 DYFEYFGPDFKLHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+++FGPD+ LH + N+N+ +YL+ ++T + E +R L HAP VQ+ P
Sbjct: 361 PTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIP 415
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++G G GK YA+N+PLRDG+DDESY +F I+ ++ FQP+ +V QCGADSL DRLG
Sbjct: 241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300
Query: 272 CFNLTVR 278
CFNL +R
Sbjct: 301 CFNLNIR 307
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 87/175 (49%), Positives = 123/175 (70%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
++G G GK YA+N+PLRDG+DDESY +F I+ ++ FQP+ +V QCGADSL DRLG
Sbjct: 241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP-YN 145
CFNL +R HG+CV+F+K + +P L+VGGGGYT RNVSR W YETSV + +++P Y
Sbjct: 301 CFNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYL 360
Query: 146 DYFEYFGPDFKLHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+++FGPD+ LH + N+N+ +YL+ ++T + E +R L HAP VQ+ P
Sbjct: 361 PTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIP 415
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
++G G GK YA+N+PLRDG+DDESY +F I+ ++ FQP+ +V QCGADSL DRLG
Sbjct: 241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300
Query: 272 CFNLTVR 278
CFNL +R
Sbjct: 301 CFNLNIR 307
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 93/197 (47%), Positives = 129/197 (65%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D +IG KGK++A+N+PL DG+DD+SY ++F I+ ++ TF+P+ +V QCGADSL D
Sbjct: 229 DLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHD 288
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETS----VALGSEIA 139
RLGCFNL ++ HG+CV+FVK + LP L+VGGGGYT RNVSR WTYET V L +I
Sbjct: 289 RLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIP 348
Query: 140 NELPYNDYFEYFGPDFKLHISPSNM-ANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVS 198
++P+ D F GPD+ L+ ++ N+N+ + LE I+ R EN+R L AP V++
Sbjct: 349 EDIPFRDSF---GPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAE 405
Query: 199 PIIGPILWYDPYQDIGA 215
I P QDI A
Sbjct: 406 CI--------PTQDISA 414
Score = 213 (80.0 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 36/67 (53%), Positives = 53/67 (79%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+IG KGK++A+N+PL DG+DD+SY ++F I+ ++ TF+P+ +V QCGADSL DRLG
Sbjct: 232 EIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLG 291
Query: 272 CFNLTVR 278
CFNL ++
Sbjct: 292 CFNLNIK 298
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 86/173 (49%), Positives = 111/173 (64%)
Query: 33 GKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTV 92
G ++AVN+PL DG+DDESY +F ++ + F+P+A+VLQCGADSL DRLGCFNL V
Sbjct: 259 GAHHAVNVPLHDGIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNV 318
Query: 93 RGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSE--IANELPYNDYFE- 149
HG CV + K + LP L+VGGGGYT RNVSR W +ETS+ + ++ I +P N F
Sbjct: 319 AAHGACVAYTKTFGLPMLVVGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRN 378
Query: 150 YFGPDFKLHISPSNMA---NQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+FGPDF L S M N+N+ YL I + E LR L AP VQ+ V P
Sbjct: 379 HFGPDFSLFPPLSEMRKLENKNSRAYLATIVQTITEQLRYLQAAPSVQMSVIP 431
Score = 199 (75.1 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 199 PIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVL 258
P GP+ P + G ++AVN+PL DG+DDESY +F ++ + F+P+A+VL
Sbjct: 242 PGTGPLDSTGPTHPLNPGA--HHAVNVPLHDGIDDESYVQLFKDVVGACVSKFRPAAIVL 299
Query: 259 QCGADSLTGDRLGCFNLTV 277
QCGADSL DRLGCFNL V
Sbjct: 300 QCGADSLGCDRLGCFNLNV 318
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 71/162 (43%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D DIG GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 213 DVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPEGVGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGRTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P+ +++I + NL+
Sbjct: 333 DHEFFTEYGPDYVLEITPSCRPDRNDPQRIQEILNLIKGNLK 374
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
DIG GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 216 DIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 70/162 (43%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLK 374
Score = 188 (71.2 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 70/162 (43%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC+++V ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLK 374
Score = 188 (71.2 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 69/162 (42%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 18 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 77
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 78 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 137
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 138 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLK 179
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 21 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 80
Query: 272 CFNLT 276
FN+T
Sbjct: 81 SFNMT 85
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 69/162 (42%), Positives = 111/162 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLK 374
Score = 189 (71.6 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 69/162 (42%), Positives = 110/162 (67%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 251 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 310
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 311 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 370
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 371 DHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLK 412
Score = 183 (69.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 254 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 313
Query: 272 CFNLT 276
FN+T
Sbjct: 314 SFNMT 318
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 69/162 (42%), Positives = 110/162 (67%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLK 374
Score = 182 (69.1 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 68/162 (41%), Positives = 109/162 (67%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++D + DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 332
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L I+PS ++N P +++I + NL+
Sbjct: 333 DHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLK 374
Score = 173 (66.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++D + DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 77/172 (44%), Positives = 105/172 (61%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
D G G GKY+A+N+PL + DE Y +F +IS V E F P A+VLQCG+DSL DRLG
Sbjct: 234 DKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLG 293
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYND 146
F L+ H + V++VK P +++GGGGYT+RNV+RCW ET V LG + +E+P
Sbjct: 294 QFALSFNAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTS 353
Query: 147 -YFEYFGPDF-KLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQ 196
Y YF P + ++ P M + N+ YL I+ LRM+ AP VQ+Q
Sbjct: 354 LYSHYFTPRLLRPNLVPK-MNDANSAAYLASIEKETLACLRMIRGAPSVQMQ 404
Score = 180 (68.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G G GKY+A+N+PL + DE Y +F +IS V E F P A+VLQCG+DSL DRLG
Sbjct: 234 DKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLG 293
Query: 272 CFNLT 276
F L+
Sbjct: 294 QFALS 298
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 389 (142.0 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 67/162 (41%), Positives = 106/162 (65%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D G GKG++YAVN+P DG+ D+ Y F ++ +V F P AVV+Q GAD++ GD
Sbjct: 1212 DVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGD 1271
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G KC+ ++ + LP L++GGGGY + N +RCWTY T LG +++E+P
Sbjct: 1272 PMCSFNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIP 1331
Query: 144 YNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
+++F +GPD+ L ISPS ++N ++LE++ + + NL+
Sbjct: 1332 DHEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLK 1373
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D G GKG++YAVN+P DG+ D+ Y F ++ +V F P AVV+Q GAD++ GD +
Sbjct: 1215 DTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMC 1274
Query: 272 CFNLT 276
FN+T
Sbjct: 1275 SFNMT 1279
>UNIPROTKB|F1N0W0 [details] [associations]
symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
Uniprot:F1N0W0
Length = 163
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 67/125 (53%), Positives = 91/125 (72%)
Query: 86 GCFNLTVRGHG-KCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPY 144
GC+ RG G +CVE+VK +N+P L++GGGGYT+RNV+RCWTYETS+ + I+ ELPY
Sbjct: 1 GCWGQRDRGRGGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPY 60
Query: 145 NDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSPIIGP 203
++YFEYF PDF LH S + NQN+ +YL++I+ +FENL+ML HAP VQ+ P
Sbjct: 61 SEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVP--AD 118
Query: 204 ILWYD 208
+L YD
Sbjct: 119 LLTYD 123
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 57/125 (45%), Positives = 89/125 (71%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 122 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 181
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG +++E+P
Sbjct: 182 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIP 241
Query: 144 YNDYF 148
+++F
Sbjct: 242 DHEFF 246
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 125 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 184
Query: 272 CFNLT 276
FN+T
Sbjct: 185 SFNMT 189
>RGD|619976 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
[GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009913
"epidermal cell differentiation" evidence=ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
[GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
development" evidence=ISO] [GO:0060044 "negative regulation of
cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
"regulation of sarcomere organization" evidence=ISO] [GO:0060789
"hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061198
"fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
Genevestigator:Q99PA1 Uniprot:Q99PA1
Length = 174
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 62/72 (86%), Positives = 65/72 (90%)
Query: 128 YETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRML 187
YET+VAL EI NELPYNDYFEYFGPDFKLHISPSNM NQNTPEY+EKIK RLFENLRML
Sbjct: 1 YETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML 60
Query: 188 PHAPGVQVQVSP 199
PHAPGVQ+Q P
Sbjct: 61 PHAPGVQMQAIP 72
>TAIR|locus:2076053 [details] [associations]
symbol:hda17 "histone deacetylase 17" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
"histone deacetylation" evidence=IEA] INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
Length = 158
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/112 (50%), Positives = 77/112 (68%)
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELPYNDY 147
F++ GH +CV+FVK++NLP L+ GGGGYT NV+RCWT ET + L +E+ NE+ NDY
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62
Query: 148 FEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQVSP 199
+YF PDF L I ++ N NT Y+ IK ++ ENLR + HAP VQ+Q P
Sbjct: 63 IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 114
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 52/90 (57%), Positives = 77/90 (85%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D ++GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL D
Sbjct: 130 DMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD 189
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVG 113
RLGCFNL++RGHG+CVE+VK +N+P L++G
Sbjct: 190 RLGCFNLSIRGHGECVEYVKSFNIPLLVLG 219
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 41/71 (57%), Positives = 60/71 (84%)
Query: 208 DPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
D Y+ +GA G+YY +N+PLRDG+DD+SY+ +F P+I++V++ +QP+ +VLQCGADSL
Sbjct: 130 DMYE-VGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGC 188
Query: 268 DRLGCFNLTVR 278
DRLGCFNL++R
Sbjct: 189 DRLGCFNLSIR 199
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 57/132 (43%), Positives = 87/132 (65%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 213 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 272
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGG--GGYTIRNVSRCWTYETSVALGSEIANE 141
+ FN+T G GKC++++ ++ L L++GG GGY + N +RCWTY T V LG +++E
Sbjct: 273 PMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSE 332
Query: 142 LPYNDYFEYFGP 153
+P ++ P
Sbjct: 333 IPDHEVKSCLSP 344
Score = 183 (69.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275
Query: 272 CFNLT 276
FN+T
Sbjct: 276 SFNMT 280
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 54/112 (48%), Positives = 79/112 (70%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD
Sbjct: 187 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD 246
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALG 135
+ FN+T G GKC++++ ++ L L++GGGGY + N +RCWTY T V LG
Sbjct: 247 PMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILG 298
Score = 189 (71.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V + F P AVVLQ GAD++ GD +
Sbjct: 190 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 249
Query: 272 CFNLT 276
FN+T
Sbjct: 250 SFNMT 254
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 56/122 (45%), Positives = 84/122 (68%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 83
D D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD
Sbjct: 18 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGD 77
Query: 84 RLGCFNLTVRGHGKCVEFVKRYNLPFLMVGG--GGYTIRNVSRCWTYETSVALGSEIANE 141
+ FN+T G GKC++++ ++ L L++GG GGY + N +RCWTY T V LG +++E
Sbjct: 78 PMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSE 137
Query: 142 LP 143
+P
Sbjct: 138 IP 139
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
D+G GKG+YY+VN+P++DG+ DE Y I ++ +V F P AVVLQ GAD++ GD +
Sbjct: 21 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 80
Query: 272 CFNLT 276
FN+T
Sbjct: 81 SFNMT 85
>TAIR|locus:2098105 [details] [associations]
symbol:hda10 "histone deacetylase 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
Length = 142
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 115 GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE 174
GGYT NV+RCWT ET + L +E+ NE+P NDY +YF PDF L I ++ N NT Y+
Sbjct: 14 GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYIS 73
Query: 175 KIKTRLFENLRMLPHAPGVQVQVSP 199
IK ++ ENLR + HAP VQ+Q P
Sbjct: 74 SIKVQILENLRYIQHAPSVQMQEVP 98
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 228 (85.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 53/152 (34%), Positives = 86/152 (56%)
Query: 39 NIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKC 98
NIP G++D S I I++ ++ F P A+V+QCG D L D +N+T++G+
Sbjct: 282 NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNMTIKGYRDS 341
Query: 99 VEFVKRY--NLPFLMVGGGGYTIRNVSRCWTYETSVALG-SEIA--NELPYNDYFEYFGP 153
++++ + +P +++GGGGY+ ++CWTY T LG S+I + LP + + +
Sbjct: 342 IDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSDIDTWDILPEHKNLDAYEK 401
Query: 154 D-FKL---HIS-PSNMANQNTPEYLEKIKTRL 180
D F+ H S PS M + N+ EYL IKT L
Sbjct: 402 DGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHL 433
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 228 (85.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 53/152 (34%), Positives = 86/152 (56%)
Query: 39 NIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKC 98
NIP G++D S I I++ ++ F P A+V+QCG D L D +N+T++G+
Sbjct: 282 NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLALDTHKEWNMTIKGYRDS 341
Query: 99 VEFVKRY--NLPFLMVGGGGYTIRNVSRCWTYETSVALG-SEIA--NELPYNDYFEYFGP 153
++++ + +P +++GGGGY+ ++CWTY T LG S+I + LP + + +
Sbjct: 342 IDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSDIDTWDILPEHKNLDAYEK 401
Query: 154 D-FKL---HIS-PSNMANQNTPEYLEKIKTRL 180
D F+ H S PS M + N+ EYL IKT L
Sbjct: 402 DGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHL 433
>UNIPROTKB|E7EWI8 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
Uniprot:E7EWI8
Length = 128
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 39/64 (60%), Positives = 52/64 (81%)
Query: 78 DSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSE 137
DSL DRLGCFNL++RGHG+CVE+VK +N+P L++GGGGYT+RNV+ TYETS+ +
Sbjct: 68 DSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA---TYETSLLVEEA 124
Query: 138 IANE 141
I+ E
Sbjct: 125 ISEE 128
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 182 (69.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
+ G G G Y+VNIPL DD + F + ++ + P +V Q GAD+ D L
Sbjct: 208 ETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLT 267
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+T + + +K +P++ VGGGGY + NV+R WT V G E+ LP
Sbjct: 268 RLEVTTHSYTYILRKLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVELPPRLP 324
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 182 (69.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 27 DIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
+ G G G Y+VNIPL DD + F + ++ + P +V Q GAD+ D L
Sbjct: 208 ETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLT 267
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
+T + + +K +P++ VGGGGY + NV+R WT V G E+ LP
Sbjct: 268 RLEVTTHSYTYILRKLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVELPPRLP 324
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 178 (67.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 38 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGK 97
VNIPL+ G DD E I I++ ++E +P A++++CG D L GDR + LT+RG +
Sbjct: 293 VNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLSR 352
Query: 98 CV-EFVKRY-NLPFLMVGGGGYTIRNVSRCWTYET 130
+ +K Y ++GGGGY +SR +TY T
Sbjct: 353 IIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 223 VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRDCS 281
VNIPL+ G DD E I I++ ++E +P A++++CG D L GDR + LT+R S
Sbjct: 293 VNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLS 351
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 121 (47.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 41/126 (32%), Positives = 55/126 (43%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D IG+GKG Y N+ L + G D Y SI ++ + F P V++ G D+L G
Sbjct: 220 DFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLG 279
Query: 83 DRLGCFNLTVRGHGKCVEFVKRYNLP-FLMVGGGGYTIR----NVSRCWTYETSVALGSE 137
D LG LT G+ + +K L+V GGY + V RC A S
Sbjct: 280 DPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI 339
Query: 138 IANELP 143
NE P
Sbjct: 340 ELNEAP 345
Score = 107 (42.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 210 YQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 268
Y D+G G G+ +VN+P M D Y+ F +I + F P V++ G D+ D
Sbjct: 637 YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDD 696
Query: 269 RLGCFNLT 276
LG + +T
Sbjct: 697 PLGEYKVT 704
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 121 (47.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 41/126 (32%), Positives = 55/126 (43%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D IG+GKG Y N+ L + G D Y SI ++ + F P V++ G D+L G
Sbjct: 222 DFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLG 281
Query: 83 DRLGCFNLTVRGHGKCVEFVKRYNLP-FLMVGGGGYTIR----NVSRCWTYETSVALGSE 137
D LG LT G+ + +K L+V GGY + V RC A S
Sbjct: 282 DPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI 341
Query: 138 IANELP 143
NE P
Sbjct: 342 ELNEAP 347
Score = 107 (42.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 210 YQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 268
Y D+G G G+ +VN+P M D Y+ F +I + F P V++ G D+ D
Sbjct: 639 YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDD 698
Query: 269 RLGCFNLT 276
LG + +T
Sbjct: 699 PLGEYKVT 706
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 121 (47.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 41/126 (32%), Positives = 55/126 (43%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D IG+GKG Y N+ L + G D Y SI ++ + F P V++ G D+L G
Sbjct: 222 DFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLG 281
Query: 83 DRLGCFNLTVRGHGKCVEFVKRYNLP-FLMVGGGGYTIR----NVSRCWTYETSVALGSE 137
D LG LT G+ + +K L+V GGY + V RC A S
Sbjct: 282 DPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI 341
Query: 138 IANELP 143
NE P
Sbjct: 342 ELNEAP 347
Score = 107 (42.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 210 YQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 268
Y D+G G G+ +VN+P M D Y+ F +I + F P V++ G D+ D
Sbjct: 639 YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDD 698
Query: 269 RLGCFNLT 276
LG + +T
Sbjct: 699 PLGEYKVT 706
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 155 (59.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 57/241 (23%), Positives = 107/241 (44%)
Query: 20 DLLHDKQDIGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGAD 78
D +DK +G GKG+ Y VNIP G M D Y + F ++ + F P V++ G D
Sbjct: 648 DANYDK--VGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFD 705
Query: 79 SLTGDRLGCFNLTVRGHGKCV-EFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSE 137
+ GD LG F +T G+ + + L++ GGY + ++S + TS+ LG
Sbjct: 706 AARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLG-- 763
Query: 138 IANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQV 197
+ P D+ + I+ N+ + P + ++ + E+LR+ +P + +
Sbjct: 764 --DSPPSLDHLTPLKTSATVSIN--NVLRAHAP-FWSSLRVNIPESLRLSLPSPKPKGKC 818
Query: 198 SPIIGPILWYDPYQDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVV 257
+P G P Q + + A + P + G D+ + + + + + + P +V
Sbjct: 819 TP--GGKGKKSPRQSTPS-QSPGQATHRPDQSGFDELTADLLSLNLNTSTSSNTSPESVA 875
Query: 258 L 258
+
Sbjct: 876 V 876
Score = 124 (48.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 210 YQDIGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD 268
Y +G GKG+ Y VNIP G M D Y + F ++ + F P V++ G D+ GD
Sbjct: 651 YDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGD 710
Query: 269 RLGCFNLT 276
LG F +T
Sbjct: 711 PLGGFQVT 718
Score = 104 (41.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D +G+G G+ Y +N+P GM+ Y + F ++ V FQP V++ G D++ G
Sbjct: 268 DSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIG 327
Query: 83 DRLGCFNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVS 123
D G ++ +K L++ GGY +++ +
Sbjct: 328 DPKGGMQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTA 369
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 165 (63.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 37 AVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHG 96
A+N+P+ ++D +Y I +I + F+P AVVLQCGAD++ D L L+ H
Sbjct: 206 ALNLPVARDLNDSAYALILDRLILPAVAGFRPDAVVLQCGADAVAEDPLSRLALSNCAHR 265
Query: 97 KCVEFVKRYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
V + L++GGGGY +V+R WT + G+EI + LP
Sbjct: 266 DTVRALAALCPRLLVLGGGGYNPWSVARAWTGVWATLSGAEIPDRLP 312
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 36/119 (30%), Positives = 60/119 (50%)
Query: 27 DIGAGKGKYYAVNIPLR-DGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRL 85
++G+ G+ Y VN+P G+ D+ Y F ++ + F P V++ G D+ GD L
Sbjct: 352 EVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPL 411
Query: 86 GCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIANELP 143
GC ++T G+ + + + L++ GGY +R++S T V LG NELP
Sbjct: 412 GCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELP 470
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 28 IGAGKGKYYAVNIPL-RDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
+G G G+ + VNIP + GM D Y F +I + F P V++ G D+ GD LG
Sbjct: 753 VGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLG 812
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVSRCWTYETSVALGSEI 138
+T G+G ++ ++V GGY + ++S T T LG +
Sbjct: 813 GCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPV 865
Score = 102 (41.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 19 WDLLH--DKQDIGAGKGKYYAVNIPLR-DGMDDESYESIFVPIISKVMETFQPSAVVLQC 75
W LH D IG+G G Y N+PL GM + Y +IF ++ V FQP +++
Sbjct: 315 WPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSA 374
Query: 76 GADSLTG 82
G D+ G
Sbjct: 375 GYDAALG 381
Score = 100 (40.3 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 213 IGAGKGKYYAVNIPL-RDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+G G G+ + VNIP + GM D Y F +I + F P V++ G D+ GD LG
Sbjct: 753 VGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLG 812
Query: 272 CFNLT 276
+T
Sbjct: 813 GCKVT 817
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 144 (55.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D +G G G+ + +NIP R GM D Y F II V+ F P +++ G D+ G
Sbjct: 344 DLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADG 403
Query: 83 DRLGCFNLTVRGHGKCVEFVK---RYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIA 139
D +G ++T G+G +K R L ++ GG Y + ++S+ +++A+ +
Sbjct: 404 DVIGACHVTPAGYGYMTHTLKGIARGKLAVILEGG--YNLDSISK-----SALAVAKVLV 456
Query: 140 NELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
E P N + + P A + E + KI+++ F++LR
Sbjct: 457 GEPPENT----------ITLRPQAEAIEVVDEVI-KIQSKYFKSLR 491
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 207 YDPYQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 265
Y +G G G+ + +NIP R GM D Y F II V+ F P +++ G D+
Sbjct: 342 YGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAA 401
Query: 266 TGDRLGCFNLT 276
GD +G ++T
Sbjct: 402 DGDVIGACHVT 412
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 144 (55.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 24 DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 82
D +G G G+ + +NIP R GM D Y F II V+ F P +++ G D+ G
Sbjct: 344 DLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADG 403
Query: 83 DRLGCFNLTVRGHGKCVEFVK---RYNLPFLMVGGGGYTIRNVSRCWTYETSVALGSEIA 139
D +G ++T G+G +K R L ++ GG Y + ++S+ +++A+ +
Sbjct: 404 DVIGACHVTPAGYGYMTHTLKGIARGKLAVILEGG--YNLDSISK-----SALAVAKVLV 456
Query: 140 NELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKIKTRLFENLR 185
E P N + + P A + E + KI+++ F++LR
Sbjct: 457 GEPPENT----------ITLRPQAEAIEVVDEVI-KIQSKYFKSLR 491
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 207 YDPYQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 265
Y +G G G+ + +NIP R GM D Y F II V+ F P +++ G D+
Sbjct: 342 YGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAA 401
Query: 266 TGDRLGCFNLT 276
GD +G ++T
Sbjct: 402 DGDVIGACHVT 412
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 118 (46.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 28 IGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
IG G+G+ Y +N+P GM D Y + F+ I+ V FQP V++ G D+L GD G
Sbjct: 294 IGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKG 353
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVSR 124
T G + L++ GGY +R +++
Sbjct: 354 EMAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAK 392
Score = 74 (31.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+G G + VN+P M D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 690 VGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLG 749
Query: 272 CFNLT 276
+T
Sbjct: 750 GCQVT 754
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 109 (43.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 29 GAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGD---R 84
G G+G+ Y +N+P GM D Y + F+ I+ V FQP V++ G D+L GD R
Sbjct: 295 GFGQGQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVR 354
Query: 85 LGCFNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVSR 124
G + T G F+ L++ GGY + +++
Sbjct: 355 QGEMSATPAGFAHLTHFLMGLAGGKLILSLEGGYNLHALAK 395
Score = 77 (32.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+G G + VN+P M D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 693 VGRAAGTGFTVNVPWNGPRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLG 752
Query: 272 CFNLT 276
+T
Sbjct: 753 GCQVT 757
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 124 (48.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDES 50
D +DIGAGKGKYYAVN PLRDG+DDES
Sbjct: 185 DLRDIGAGKGKYYAVNYPLRDGIDDES 211
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 211 QDIGAGKGKYYAVNIPLRDGMDDES 235
+DIGAGKGKYYAVN PLRDG+DDES
Sbjct: 187 RDIGAGKGKYYAVNYPLRDGIDDES 211
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 113 (44.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 29 GAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGC 87
G G+G+ Y +N+P GM D Y + F+ ++ V FQP V++ G D+L GD G
Sbjct: 296 GLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGE 355
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVS 123
T G + + L++ GGY + +++
Sbjct: 356 MAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLA 392
Score = 69 (29.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
IG G + VN+ M D Y + + ++ V F P V++ G D+ GD LG
Sbjct: 691 IGKATGTGFTVNVAWNGPRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLG 750
>UNIPROTKB|A6ND61 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
Length = 139
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESI 54
D D+G GKG+YY+VN+P++DG+ DE Y I
Sbjct: 96 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 126
Score = 104 (41.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESI 239
D+G GKG+YY+VN+P++DG+ DE Y I
Sbjct: 99 DVGLGKGRYYSVNVPIQDGIQDEKYYQI 126
>UNIPROTKB|I3LHJ7 [details] [associations]
symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 GeneTree:ENSGT00530000062889
Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
Length = 51
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 24 DKQDIGAGKGKYYAVNIPLRDGMDDESYESI 54
D D+G GKG+YY+VN+P++DG+ DE Y I
Sbjct: 18 DVSDVGLGKGRYYSVNVPIQDGIQDEKYYHI 48
Score = 103 (41.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 212 DIGAGKGKYYAVNIPLRDGMDDESYESI 239
D+G GKG+YY+VN+P++DG+ DE Y I
Sbjct: 21 DVGLGKGRYYSVNVPIQDGIQDEKYYHI 48
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 111 (44.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 29 GAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGC 87
G G+G+ Y +N+P GM D Y + F+ ++ V FQP V++ G D+L GD G
Sbjct: 296 GFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGE 355
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIR 120
T G + + L++ GGY +R
Sbjct: 356 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLR 389
Score = 68 (29.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
IG G + VN+ M D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 691 IGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLG 750
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 111 (44.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 29 GAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGC 87
G G+G+ Y +N+P GM D Y + F+ ++ V FQP V++ G D+L GD G
Sbjct: 310 GFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGE 369
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIR 120
T G + + L++ GGY +R
Sbjct: 370 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLR 403
Score = 68 (29.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
IG G + VN+ M D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 705 IGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLG 764
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 113 (44.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 29 GAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGC 87
G G+G+ Y +N+P GM D Y + F+ ++ V FQP V++ G D+L GD G
Sbjct: 306 GFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGE 365
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIRNVS 123
T G + + L++ GGY +R+++
Sbjct: 366 MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLA 402
Score = 64 (27.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
IG G + VN+ + D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 700 IGQAAGTGFTVNVAWNGPRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLG 759
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 114 (45.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 28 IGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 86
IG G+G+ Y +N+P GM D Y + F+ ++ V FQP V++ G D+L GD G
Sbjct: 309 IGFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKG 368
Query: 87 CFNLTVRGHGKCVEFVKRYNLPFLMVG-GGGYTIR 120
T G + + L++ GGY +R
Sbjct: 369 EMATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLR 403
Score = 63 (27.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 213 IGAGKGKYYAVNIPLRDG-MDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG 271
+G G + VN+ + D Y + + ++ + F P V++ G D+ GD LG
Sbjct: 704 VGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLG 763
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 119 (46.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 14 DRDQTWDLLH--DKQDIGAGKGKYYAVNIPLRD-GMDDESYESIFVPIISKVMETFQPSA 70
+ + W L D +G GKGK + +N+P GM + Y + F ++ V F P
Sbjct: 200 EHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFDPEL 259
Query: 71 VVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRY-NLPFLMVGGGGYTIRNVSR--CWT 127
V++ G DS GD G N T F+ + + ++ GGY ++++S C T
Sbjct: 260 VLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESVCMT 319
Query: 128 YET 130
+T
Sbjct: 320 VKT 322
Score = 49 (22.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 211 QDIGAGKGKYYAV-NIP-LRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 267
+ G K+Y V N L+D D + S + I V ++QP+ +V+ G + G
Sbjct: 534 EQTGKSSSKHYIVLNWKELKDA-DGNDFFSAVLGFILPVAYSYQPNLIVIAVGPNRSLG 591
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 30 AGKGKYYA--VNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGC 87
AG Y +N+PL G DE + + ++E FQP ++ G D+ D L
Sbjct: 186 AGTPNAYGTTINLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLAR 245
Query: 88 FNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTI 119
+T RG+G+ E +K P L V GGY+I
Sbjct: 246 MAVTARGYGRITELIK----PDLAVLEGGYSI 273
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 34/104 (32%), Positives = 50/104 (48%)
Query: 29 GAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG-- 86
G G G Y+ N+PL +DES+ + ++ +V F+P ++ Q GAD+ D L
Sbjct: 208 GQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHL 267
Query: 87 CFNLTV-RGHGKCV-EFVKRY-NLPFLMVGGGGYTI-RNVSRCW 126
C + + R K E Y ++ VGGGGY R V R W
Sbjct: 268 CATMNIYREIPKLAREIANEYCEGRWIAVGGGGYDHWRVVPRAW 311
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 34/104 (32%), Positives = 50/104 (48%)
Query: 29 GAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLG-- 86
G G G Y+ N+PL +DES+ + ++ +V F+P ++ Q GAD+ D L
Sbjct: 208 GQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHL 267
Query: 87 CFNLTV-RGHGKCV-EFVKRY-NLPFLMVGGGGYTI-RNVSRCW 126
C + + R K E Y ++ VGGGGY R V R W
Sbjct: 268 CATMNIYREIPKLAREIANEYCEGRWIAVGGGGYDHWRVVPRAW 311
>UNIPROTKB|F5H6R5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
Length = 155
Score = 102 (41.0 bits), Expect = 0.00079, P = 0.00079
Identities = 30/85 (35%), Positives = 39/85 (45%)
Query: 40 IPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCV 99
+ L G +D+ Y I K ++ P VV G D L GDRLG +++ G K
Sbjct: 31 VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRD 90
Query: 100 EFVKRY----NLPFLMVGGGGYTIR 120
E V R +P LMV GGY R
Sbjct: 91 ELVFRMVRGRRVPILMVTSGGYQKR 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 282 282 0.00083 115 3 11 22 0.36 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 107
No. of states in DFA: 605 (64 KB)
Total size of DFA: 212 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.53u 0.09s 22.62t Elapsed: 00:00:06
Total cpu time: 22.54u 0.09s 22.63t Elapsed: 00:00:06
Start: Thu Aug 15 11:02:02 2013 End: Thu Aug 15 11:02:08 2013
WARNINGS ISSUED: 1