BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8699
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35738|ODBB_RAT 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3
Length = 390
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/326 (69%), Positives = 280/326 (85%), Gaps = 4/326 (1%)
Query: 4 QGYWTGFFQSSPSQLLSSQG----GVLFGEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSE 59
Q FQS S L +S V+FGEDV FGGVFRC++GL++KYGK RVFNTPL E
Sbjct: 65 QTQKMNLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCE 124
Query: 60 QGIVGFGIGLAVSGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPC 119
QGIVGFGIG+AV+GATAIAEIQFADYIFPAFDQIVNEAAKYRYRSG+ F+CG+LTIRAP
Sbjct: 125 QGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPW 184
Query: 120 MAVGHGALYHSQSPEAYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRA 179
VGHGALYHSQSPEA+FAH PGIKVVIPR P++AKGLLLSCI+DK+PCIFFEPK+LYRA
Sbjct: 185 GCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRA 244
Query: 180 AVEDVPEDYYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVS 239
AVE VP + Y++PL +A+++ G+DVTL+ WGTQVHV+REVA +A+E+LGVSCEVIDL +
Sbjct: 245 AVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRT 304
Query: 240 ILPWDRETVFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTP 299
I+PWD +TV +S KTGR++I+HEAPLT GF +E+++++Q++CFL+LEAPI RV GYDTP
Sbjct: 305 IVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTP 364
Query: 300 FPHIFEPFYIPDKWRCLEAVKQITRY 325
FPHIFEPFYIPDKW+C +A++++ Y
Sbjct: 365 FPHIFEPFYIPDKWKCYDALRKMINY 390
>sp|Q6P3A8|ODBB_MOUSE 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus
musculus GN=Bckdhb PE=2 SV=2
Length = 390
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 227/321 (70%), Positives = 279/321 (86%), Gaps = 4/321 (1%)
Query: 9 GFFQSSPSQLLSSQG----GVLFGEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVG 64
FQS S L +S V+FGEDV FGGVFRC++GL++KYGK RVFNTPL EQGIVG
Sbjct: 70 NLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVG 129
Query: 65 FGIGLAVSGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGH 124
FGIG+AV+GATAIAEIQFADYIFPAFDQIVNEAAKYRYRSG+ F+CG+LTIRAP VGH
Sbjct: 130 FGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGH 189
Query: 125 GALYHSQSPEAYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDV 184
GALYHSQSPEA+FAH PGIKVVIPR P++AKGLLLSCI+DK+PCIFFEPK+LYRAAVE V
Sbjct: 190 GALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQV 249
Query: 185 PEDYYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWD 244
P + Y++PL +A+++ G+DVTL+ WGTQVHV+REVA +A+E+LGVSCEVIDL +I+PWD
Sbjct: 250 PVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWD 309
Query: 245 RETVFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIF 304
+TV +S KTGR++I+HEAPLT GF +E+++++Q++CFL+LEAPI RV GYDTPFPHIF
Sbjct: 310 VDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIF 369
Query: 305 EPFYIPDKWRCLEAVKQITRY 325
EPFYIPDKW+C +A++++ Y
Sbjct: 370 EPFYIPDKWKCYDALRKMINY 390
>sp|P21953|ODBB_HUMAN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo
sapiens GN=BCKDHB PE=1 SV=2
Length = 392
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 225/321 (70%), Positives = 278/321 (86%), Gaps = 4/321 (1%)
Query: 9 GFFQSSPSQLLSSQG----GVLFGEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVG 64
FQS S L +S V+FGEDV FGGVFRC++GL++KYGK RVFNTPL EQGIVG
Sbjct: 72 NLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVG 131
Query: 65 FGIGLAVSGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGH 124
FGIG+AV+GATAIAEIQFADYIFPAFDQIVNEAAKYRYRSG+ F+CG+LTIR+P VGH
Sbjct: 132 FGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGH 191
Query: 125 GALYHSQSPEAYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDV 184
GALYHSQSPEA+FAH PGIKVVIPR P++AKGLLLSCI+DK+PCIFFEPK+LYRAA E+V
Sbjct: 192 GALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEV 251
Query: 185 PEDYYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWD 244
P + Y +PL +A+++ G+DVTL+ WGTQVHV+REVA +AKE+LGVSCEVIDL +I+PWD
Sbjct: 252 PIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWD 311
Query: 245 RETVFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIF 304
+T+ +S KTGR++I+HEAPLT GF +E+++++Q++CFL+LEAPI RV GYDTPFPHIF
Sbjct: 312 VDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIF 371
Query: 305 EPFYIPDKWRCLEAVKQITRY 325
EPFYIPDKW+C +A++++ Y
Sbjct: 372 EPFYIPDKWKCYDALRKMINY 392
>sp|P21839|ODBB_BOVIN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos
taurus GN=BCKDHB PE=1 SV=2
Length = 392
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 224/321 (69%), Positives = 278/321 (86%), Gaps = 4/321 (1%)
Query: 9 GFFQSSPSQLLSSQG----GVLFGEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVG 64
FQ+ S L +S V+FGEDV FGGVFRC++GL++KYGK RVFNTPL EQGIVG
Sbjct: 72 NLFQAVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVG 131
Query: 65 FGIGLAVSGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGH 124
FGIG+AV+GATAIAEIQFADYIFPAFDQIVNEAAKYRYRSG+ F+CG+LTIR+P VGH
Sbjct: 132 FGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGH 191
Query: 125 GALYHSQSPEAYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDV 184
GALYHSQSPEA+FAH PGIKVV+PR P++AKGLLLSCI+DK+PCIFFEPK+LYRAAVE V
Sbjct: 192 GALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQV 251
Query: 185 PEDYYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWD 244
P + Y +PL +A+++ G+DVTL+ WGTQVHV+REVA +A+E+LGVSCEVIDL +ILPWD
Sbjct: 252 PVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVIDLRTILPWD 311
Query: 245 RETVFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIF 304
+TV +S KTGR++++HEAPLT GF +E+++++Q++CFL+LEAPI RV GYDTPFPHIF
Sbjct: 312 VDTVCKSVIKTGRLLVSHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIF 371
Query: 305 EPFYIPDKWRCLEAVKQITRY 325
EPFYIPDKW+C +A++++ Y
Sbjct: 372 EPFYIPDKWKCYDALRKMINY 392
>sp|Q55FN7|ODBB_DICDI 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1
Length = 370
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/301 (67%), Positives = 248/301 (82%)
Query: 25 VLFGEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
V+FGEDVGFGGVFRC++GL++KYG RVFNTPL EQGI GF IGLA GAT IAEIQFAD
Sbjct: 70 VVFGEDVGFGGVFRCTVGLRDKYGASRVFNTPLCEQGIAGFAIGLAAQGATPIAEIQFAD 129
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
YIFPAFDQIVNEAAKYRYRSG QF CG+LTIR+P AVGHG YHSQSPE+YF HTPG+K
Sbjct: 130 YIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSPYGAVGHGGHYHSQSPESYFGHTPGLK 189
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
VVIP P +AKGLLL+ I++KDP IFFEPK++YR+AVE+VP YE+PL KA I+ G D
Sbjct: 190 VVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKD 249
Query: 205 VTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHEA 264
+T+IGWG Q+ VL + +A+E+LG+SCE+IDL +I PWD ETV +S +KTGRV+I+HEA
Sbjct: 250 ITIIGWGAQMRVLLQAVNMAEEKLGISCELIDLRTIQPWDVETVVESVKKTGRVVISHEA 309
Query: 265 PLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIFEPFYIPDKWRCLEAVKQITR 324
P T G+ AE++A+IQ++CFL LEAPI+RV GYDTPFP IFE FY+PD + E++K+
Sbjct: 310 PKTGGWAAEISATIQERCFLHLEAPIQRVCGYDTPFPLIFEKFYVPDHLKNFESIKKTMV 369
Query: 325 Y 325
Y
Sbjct: 370 Y 370
>sp|Q9I1M1|ODBB_PSEAE 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA2 PE=3 SV=1
Length = 350
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 202/315 (64%), Gaps = 22/315 (6%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
V+FG+DVG FGGVFRC+ GLQ+KYG RVF+ P+SE GI+G +G+ G + EIQFA
Sbjct: 38 VVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFA 97
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
DY++PA DQ+++EAA+ RYRS F +T+R PC +G HSQSPEA F G+
Sbjct: 98 DYVYPASDQLISEAARLRYRSAGDFIV-PMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGL 156
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVE----------------DVPED 187
+ V+P PY AKGLL++CI++ DP IF EPK LY + VP+
Sbjct: 157 RTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDG 216
Query: 188 YYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRET 247
YY++PLDKA I+ G +T++ +GT V+V A A ++ G+ E+IDL S+ P D ET
Sbjct: 217 YYKVPLDKAAIVRPGAALTVLTYGTMVYV----AQAAADETGLDAEIIDLRSLWPLDLET 272
Query: 248 VFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIFEPF 307
+ S +KTGR +IAHEA T GFGAEL + +Q+ CF LEAPI RVTG+DTP+PH E
Sbjct: 273 IVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWA 332
Query: 308 YIPDKWRCLEAVKQI 322
Y P R A K++
Sbjct: 333 YFPGPARVGAAFKRV 347
>sp|P09061|ODBB_PSEPU 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida
GN=bkdA2 PE=1 SV=1
Length = 339
Score = 291 bits (744), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/315 (48%), Positives = 200/315 (63%), Gaps = 22/315 (6%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
V++G+DVG FGGVFRC+ GLQ KYGK RVF+ P+SE GIVG +G+ G + EIQFA
Sbjct: 27 VVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQFA 86
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
DY +PA DQIV+E A+ RYRS +F LT+R PC +G HSQSPEA F G+
Sbjct: 87 DYFYPASDQIVSEMARLRYRSAGEF-IAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGL 145
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVED----------------VPED 187
+ V+P PY AKGLL++ I+ DP IF EPK LY + VP+
Sbjct: 146 RTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDG 205
Query: 188 YYELPLDKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRET 247
YY +PLDKA I G DV+++ +GT V+V A +A E+ GV EVIDL S+ P D +T
Sbjct: 206 YYTVPLDKAAITRPGNDVSVLTYGTTVYV----AQVAAEESGVDAEVIDLRSLWPLDLDT 261
Query: 248 VFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIFEPF 307
+ +S +KTGR ++ HEA T GFGAEL + +Q+ CF LEAPI RVTG+DTP+PH E
Sbjct: 262 IVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWA 321
Query: 308 YIPDKWRCLEAVKQI 322
Y P R A+K++
Sbjct: 322 YFPGPSRVGAALKKV 336
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 200/303 (66%), Gaps = 5/303 (1%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
V+ GEDVG GGVF + GL +KYG RV +TPLSE IVG +G+A G +AEIQFA
Sbjct: 25 VVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFA 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
DYIFP FDQ+V++ AK RYRSG QF+ L +R P G +HSQSPEA+F HT G+
Sbjct: 85 DYIFPGFDQLVSQVAKLRYRSGGQFTA-PLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
KVV PY AKGLL + I+D+DP +F EPK LYR+ E+VPE+ Y LP+ KA + G
Sbjct: 144 KVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGK 203
Query: 204 DVTLIGWGTQV-HVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAH 262
D+TLIG+GT + VL+ A LAK GVS EV+DL +++PWD E V S KTGRV++
Sbjct: 204 DLTLIGYGTVMPEVLQAAAELAKA--GVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVS 261
Query: 263 EAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIFEPFYIPDKWRCLEAVKQI 322
+AP + F +E+AA+I + L AP RVTG+DTP+P+ + Y+P R L A K+
Sbjct: 262 DAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQDKLYLPTVTRILNAAKRA 321
Query: 323 TRY 325
Y
Sbjct: 322 LDY 324
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 285 bits (730), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/303 (50%), Positives = 199/303 (65%), Gaps = 5/303 (1%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
V+ GEDVG GGVF + GL +KYG RV +TPLSE IVG +G+A G +AEIQFA
Sbjct: 25 VVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFA 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
DYIFP FDQ+V++ AK RYRSG QF+ L +R P G +HSQSPEA+F HT G+
Sbjct: 85 DYIFPGFDQLVSQVAKLRYRSGGQFTA-PLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
KVV PY AKGLL + I+D+DP +F EPK LYR+ E+VPE+ Y L + KA + G
Sbjct: 144 KVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLSIGKAALRREGK 203
Query: 204 DVTLIGWGTQV-HVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAH 262
D+TLIG+GT + VL+ A LAK GVS EV+DL +++PWD E V S KTGRV++
Sbjct: 204 DLTLIGYGTVMPEVLQAAAELAKA--GVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVS 261
Query: 263 EAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIFEPFYIPDKWRCLEAVKQI 322
+AP + F +E+AA+I + L AP RVTG+DTP+P+ + Y+P R L A K+
Sbjct: 262 DAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQDKLYLPTVTRILNAAKRA 321
Query: 323 TRY 325
Y
Sbjct: 322 LDY 324
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 195/304 (64%), Gaps = 6/304 (1%)
Query: 26 LFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GEDVG GGVF+ + GL E++G+ RV +TPL+E I G GIG A+ G IAE+QFAD
Sbjct: 26 VLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFAD 85
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+I PA +QI++EAAK RYRS N +SC + +RAP HGALYHSQS EA FA+ PG+K
Sbjct: 86 FIMPAVNQIISEAAKIRYRSNNDWSC-PIVVRAPYGGGVHGALYHSQSVEAIFANQPGLK 144
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V+P PY AKGLL + ++D+DP +FFE K YR +VP D Y LP+ KAD+ G D
Sbjct: 145 IVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKGEVPADDYVLPIGKADVKREGDD 204
Query: 205 VTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHEA 264
+T+I +G VH + A E+ G+S V+DL ++ P D+E + ++A KTG+V++ E
Sbjct: 205 ITVITYGLCVHFALQAAERL-EKDGISAHVVDLRTVYPLDKEAIIEAASKTGKVLLVTED 263
Query: 265 PLTSGFGAELAASIQDKCFLSLEAPIRRVTGYD---TPFPHIFEPFYIPDKWRCLEAVKQ 321
+E+AA I + C L+API+R+ G D P+ E +++ + + A+++
Sbjct: 264 TKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAPTMEKYFMVNPDKVEAAMRE 323
Query: 322 ITRY 325
+ +
Sbjct: 324 LAEF 327
>sp|P35488|ODPB_ACHLA Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma
laidlawii GN=pdhB PE=1 SV=1
Length = 327
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 177/280 (63%), Gaps = 7/280 (2%)
Query: 25 VLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
V+FGED GF GGVFR + GLQ+KYG+ RVF+TP++E IVG +G+A++G IAEIQF
Sbjct: 25 VVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFD 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
+IFP + +V AA+ R RS QF+ + +R P +HS++ E F PG+
Sbjct: 85 GFIFPGYTDLVTHAARMRNRSRGQFTV-PMVLRLPHGGGIRALEHHSEALEVLFGSIPGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
KVV P PY AKGLLL+ I D DP +F EPK +YRA ++VP + YE+P+ KA ++ GT
Sbjct: 144 KVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQEVPAEMYEIPIGKAKVVKQGT 203
Query: 204 DVTLIGWGTQVHVLREVAGLAK--EQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIA 261
D+T++ WG+ ++REV K E G+S E+IDL +I P D ET+ S +KTG+ ++
Sbjct: 204 DMTVVAWGS---IVREVEKAVKLVEAEGISVEIIDLRTISPIDEETILNSVKKTGKFMVV 260
Query: 262 HEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFP 301
EA + G AEL + +K F LEA R TG+D P
Sbjct: 261 TEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVP 300
>sp|P21874|ODPB_GEOSE Pyruvate dehydrogenase E1 component subunit beta OS=Geobacillus
stearothermophilus GN=pdhB PE=1 SV=2
Length = 325
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 188/312 (60%), Gaps = 6/312 (1%)
Query: 17 QLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
+L + ++FGEDVG GGVFR + GLQ ++G+ RVF+TPL+E GI G IGLA+ G
Sbjct: 17 ELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFR 76
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
+ EIQF +++ D I + A+ RYR+G ++ +TIR+P H HS S E
Sbjct: 77 PVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHM-PITIRSPFGGGVHTPELHSDSLEG 135
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
A PG+KVVIP PY AKGLL+S I+D DP IF E LYR+ ++VPE Y +P+ K
Sbjct: 136 LVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGK 195
Query: 196 ADILVAGTDVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
ADI G D+T+I +G VH L+ A L KE G+S EV+DL ++ P D ET+ S K
Sbjct: 196 ADIKREGKDITIIAYGAMVHESLKAAAELEKE--GISAEVVDLRTVQPLDIETIIGSVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR I+ EA +G A + A I ++ LSLEAP+ RV DT +P E ++P+
Sbjct: 254 TGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLPNFK 313
Query: 314 RCLEAVKQITRY 325
+E K++ +
Sbjct: 314 DVIETAKKVMNF 325
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
S+L + ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV+G
Sbjct: 16 SELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ EIQF +++ FD++ + A+ R+RSG +TIR P H H+ + E
Sbjct: 76 RPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y++ +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSAR 253
KA++ G D+TLI +G V L+ L K+ G S EVIDL ++ P D +T+ S
Sbjct: 195 KANVKKEGNDITLISYGAMVQESLKAAEELEKD--GYSVEVIDLRTVQPIDIDTLVASVE 252
Query: 254 KTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDK 312
KTGR ++ EA +G GA++AA + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 253 KTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVWLPNK 312
Query: 313 WRCLEAVK 320
+E K
Sbjct: 313 KDIIEQAK 320
>sp|Q5HQ75|ODPB_STAEQ Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3
SV=1
Length = 325
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
S+L + ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV+G
Sbjct: 16 SELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ EIQF +++ FD++ + A+ R+RSG +TIR P H H+ + E
Sbjct: 76 RPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y++ +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSAR 253
KA++ G D+TLI +G V L+ L K+ G S EVIDL ++ P D +T+ S
Sbjct: 195 KANVKKEGNDITLISYGAMVQESLKAAEELEKD--GYSVEVIDLRTVQPIDIDTLVASVE 252
Query: 254 KTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDK 312
KTGR ++ EA +G GA++AA + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 253 KTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVWLPNK 312
Query: 313 WRCLEAVK 320
+E K
Sbjct: 313 KDIIEQAK 320
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR+P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + Q ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GLAV G
Sbjct: 16 TELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ E+QF ++F FD I + A+ R+RSG +TIR P H H+ + E
Sbjct: 76 RPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGGGVHTPELHADNLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A +PG+KVVIP GPY AKGLL+S I+ DP ++ E LYR+ E+VPE+ Y + +
Sbjct: 135 GILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIG 194
Query: 195 KADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
KA++ G D+++I +G V + A E+ G S EVIDL ++ P D +T+ S K
Sbjct: 195 KANVKKEGNDISIITYGAMVQESMK-AAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEK 253
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKW 313
TGR ++ EA +G GA + A + ++ LSLEAPI RV DT +P E ++P+K
Sbjct: 254 TGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKN 313
Query: 314 RCLEAVKQITRY 325
+E K+ +
Sbjct: 314 DIIEKAKETLEF 325
>sp|Q6ABX8|ODPB_LEIXX Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=pdhB PE=3 SV=1
Length = 337
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 186/313 (59%), Gaps = 11/313 (3%)
Query: 18 LLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATA 76
L++ ++ GEDVG GGVFR + GLQ ++G RV +TPL+E GIVG IGLA+ G
Sbjct: 31 LVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRP 90
Query: 77 IAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGH-GAL-YHSQSPE 134
+ EIQF ++FP FDQI + AK R S + IR P GH GA+ +H ++PE
Sbjct: 91 VVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSM-PVVIRIPHG--GHIGAVEHHQEAPE 147
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVE-DVPEDYYELPL 193
AYFAHT G+++V P P+ A ++ I DP IFFEP Y E D E+ LPL
Sbjct: 148 AYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRYWPKGEVDTLEN--PLPL 205
Query: 194 DKADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSAR 253
+ I+ +GTD T++ W V V A +A E+ G S EV+DL S+ P D V +S +
Sbjct: 206 HASRIVRSGTDATIVAWAGMVPVALRAAEIAAEE-GRSLEVVDLRSLAPIDYAPVLRSVQ 264
Query: 254 KTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDK 312
KTGR+++A EAP G+E+AA + +K F SLEAP+ RV G+DTPFP E Y+PD
Sbjct: 265 KTGRLVVAQEAPGIVSVGSEVAAVVGEKAFYSLEAPVLRVAGFDTPFPPAKLESLYLPDA 324
Query: 313 WRCLEAVKQITRY 325
R LE V + Y
Sbjct: 325 DRILEVVDRSLAY 337
>sp|P21882|ODPB_BACSU Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus
subtilis (strain 168) GN=pdhB PE=3 SV=2
Length = 325
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 192/313 (61%), Gaps = 6/313 (1%)
Query: 16 SQLLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGA 74
++L + + ++FGEDVG GGVFR + GLQ+++G+ RVF+TPL+E GI G +GL ++G
Sbjct: 16 TELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGF 75
Query: 75 TAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPE 134
+ EIQF +++ D + + A+ RYRSG +++ +TIR+P H H+ S E
Sbjct: 76 RPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTS-PVTIRSPFGGGVHTPELHADSLE 134
Query: 135 AYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLD 194
A PGIKVVIP PY AKGLL+S I+D DP +F E LYR+ ++VPE+ Y + L
Sbjct: 135 GLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELG 194
Query: 195 KADILVAGTDVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSAR 253
KAD+ GTD+++I +G VH L+ L K+ G+S EV+DL ++ P D +T+ S
Sbjct: 195 KADVKREGTDLSIITYGAMVHESLKAADELEKD--GISAEVVDLRTVSPLDIDTIIASVE 252
Query: 254 KTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFP-HIFEPFYIPDK 312
KTGR I+ EA +G A + A I D+ LSLEAP+ RV DT FP E ++P+
Sbjct: 253 KTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPFSQAESVWLPNH 312
Query: 313 WRCLEAVKQITRY 325
LE +++ +
Sbjct: 313 KDVLETARKVLEF 325
>sp|O06160|BKDB_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit beta OS=Mycobacterium
tuberculosis GN=bkdB PE=1 SV=1
Length = 348
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 179/304 (58%), Gaps = 8/304 (2%)
Query: 25 VLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
++FGEDV GGVFR + GL + +G R F+TPL+E I+G +GLA+ G + EIQF
Sbjct: 47 LVFGEDVAVEGGVFRVTEGLADTFGADRCFDTPLAESAIIGIAVGLALRGFVPVPEIQFD 106
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
+ +PAFDQ+V+ AKYR R+ + +T+R P A +HS S E+Y+ HT G+
Sbjct: 107 GFSYPAFDQVVSHLAKYRTRTRGEVDM-PVTVRIPSFGGIGAAEHHSDSTESYWVHTAGL 165
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLY--RAAVEDVPEDYYELPLDKADILVA 201
KVV+P P A LL I DP ++ EPK Y R V+ E P+ A + +
Sbjct: 166 KVVVPSTPGDAYWLLRHAIACPDPVMYLEPKRRYHGRGMVD---TSRPEPPIGHAMVRRS 222
Query: 202 GTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIA 261
GTDVT++ +G V A A++Q S EVIDL S+ P D +T+ S ++TGR ++
Sbjct: 223 GTDVTVVTYGNLVSTALSSADTAEQQHDWSLEVIDLRSLAPLDFDTIAASIQRTGRCVVM 282
Query: 262 HEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI-FEPFYIPDKWRCLEAVK 320
HE P + G+GA LAA IQ++ F LEAP+ R G+DTP+P E ++P R L+ V+
Sbjct: 283 HEGPRSLGYGAGLAARIQEEMFYQLEAPVLRACGFDTPYPPARLEKLWLPGPDRLLDCVE 342
Query: 321 QITR 324
++ R
Sbjct: 343 RVLR 346
>sp|P75391|ODPB_MYCPN Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhB PE=3 SV=1
Length = 327
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 189/304 (62%), Gaps = 8/304 (2%)
Query: 25 VLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
VL+G+D GF GGVFR + GLQ+KYG+ RV++ P++E + G G+G A+ G I EIQF+
Sbjct: 28 VLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFS 87
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGAL-YHSQSPEAYFAHTPG 142
+ FPA QI AA+ R RS ++C + +R P M G AL +HS++ EA + G
Sbjct: 88 GFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMP-MGGGIKALEHHSETLEAIYGQIAG 145
Query: 143 IKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAG 202
+K V+P PY KGL L+ ++ DP +FFEPK LYRA +++P DYY +P+ +A+++ G
Sbjct: 146 LKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQG 205
Query: 203 TDVTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIA 261
++T++ +G T ++ V G + G+ E+IDL +I PWD+ETVF S +KTGR+++
Sbjct: 206 NNLTIVSYGPTMFDLINMVYGGELKDKGI--ELIDLRTISPWDKETVFNSVKKTGRLLVV 263
Query: 262 HEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIF-EPFYIPDKWRCLEAVK 320
EA T E+ AS+ ++ F L+A +RVTG+D P E + R LEAV
Sbjct: 264 TEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPLARGEHYQFNLNARILEAVN 323
Query: 321 QITR 324
Q+ +
Sbjct: 324 QLLK 327
>sp|P47515|ODPB_MYCGE Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhB PE=3 SV=1
Length = 326
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 10/312 (3%)
Query: 18 LLSSQGGVLFGEDVGF-GGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATA 76
L Q VL+G+D GF GGVFR + GLQ+KYG RV++ P++E + G G+G A+ G
Sbjct: 20 LERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKP 79
Query: 77 IAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGAL-YHSQSPEA 135
I EIQF+ + FPA QI AA+ R RS ++ L +R P M G AL +HS++ EA
Sbjct: 80 IVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAP-LVVRMP-MGGGIKALEHHSETLEA 137
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
+A G+K V+P PY KGL L+ I+ DP IFFEPK LYRA +++P DYY +P+ +
Sbjct: 138 IYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGE 197
Query: 196 ADILVAGTDVTLIGWGTQVHVLREV--AGLAKEQLGVSCEVIDLVSILPWDRETVFQSAR 253
A+++ G+++T++ +G + L + +G K++ E+IDL +I PWD++TVF S +
Sbjct: 198 ANLISEGSELTIVSYGPTMFDLINLVYSGELKDK---GIELIDLRTISPWDKQTVFNSVK 254
Query: 254 KTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHIF-EPFYIPDK 312
KTGR+++ EA + AE+ S+ ++ F L+ +RVTG+D P E +
Sbjct: 255 KTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIVVPLARGEKYQFEIN 314
Query: 313 WRCLEAVKQITR 324
R ++AV Q+ +
Sbjct: 315 ARVIDAVNQLLK 326
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 167/302 (55%), Gaps = 6/302 (1%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GEDVG +GG ++ + L KYG RV +TP++E G IG A++G I E
Sbjct: 26 VIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMS 85
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
++ AF+QI N A RY SG F+ L IR P HSQ EAYF PG+K
Sbjct: 86 FLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLK 144
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V PY AKGLL S I+D +P +FFE +LY E++PED Y +PLDKA+++ G D
Sbjct: 145 IVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPEDEYLIPLDKAEVVRKGKD 203
Query: 205 VTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHEA 264
+T++ + H + E L G EV+DL+S+ P D +++ S +KT RV+I E
Sbjct: 204 ITILTYSRMRHHVTEALPLLLND-GYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEEC 262
Query: 265 PLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIPDKWRCLEAVKQI 322
T+G GAEL A I + F L+AP+ R++ D P P+ E + + ++AVK I
Sbjct: 263 MKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVKNI 322
Query: 323 TR 324
Sbjct: 323 VN 324
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 176/321 (54%), Gaps = 8/321 (2%)
Query: 7 WTGFFQSSPSQLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGF 65
+ +++ ++ + + GEDVG +GG ++ + L KYG RV +TP++E +G
Sbjct: 7 FDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMGM 66
Query: 66 GIGLAVSGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHG 125
IG A++G I E ++ AF+QI N A RY SG F + IR P
Sbjct: 67 AIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQL 125
Query: 126 ALYHSQSPEAYFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVP 185
HSQ EAYF PG+K+V PY AKGLL S I+D +P IFFE +LY +++P
Sbjct: 126 GAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DELP 184
Query: 186 EDYYELPLDKADILVAGTDVTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWD 244
D Y LPLDKA+++ G DVT++ + + HV++ V L + G + EVIDL+S+ P D
Sbjct: 185 NDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVND--GYNPEVIDLISLKPLD 242
Query: 245 RETVFQSARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH-- 302
++ QS KT ++II E T G GAE+ A I D F L+API R++ D P P+
Sbjct: 243 ITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNG 302
Query: 303 IFEPFYIPDKWRCLEAVKQIT 323
E + + +EAVK I
Sbjct: 303 KLEKATVIYPQQIIEAVKSIV 323
>sp|O34591|ACOB_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Bacillus subtilis (strain 168) GN=acoB PE=3 SV=3
Length = 342
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 162/284 (57%), Gaps = 5/284 (1%)
Query: 29 EDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFADYIFP 88
+D +GGV + GL +++G+ RV +TP+SE G +G + A +G IAE+ F D+I
Sbjct: 43 DDEAWGGVLGVTKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGT 102
Query: 89 AFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIKVVIP 148
FDQ++N+ AK+RY G + +T+R A A HSQS F PG+K V+P
Sbjct: 103 CFDQVINQGAKFRYMFGGKAQVP-ITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVP 161
Query: 149 RGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTDVTLI 208
PY AKGLLL+ I+D DP FFE K Y E VPEDYY +PL KADI G DVTL
Sbjct: 162 SNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMKGE-VPEDYYTIPLGKADIKREGNDVTLF 220
Query: 209 GWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHEAPLTS 268
G QV+ E A E+ G+ EV+D S+ P D + +F S KT R+II EA
Sbjct: 221 AVGKQVNTALEAAAQLSER-GIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRC 279
Query: 269 GFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIP 310
++AA + DK F L+API+R+T TP P + E Y+P
Sbjct: 280 SIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLP 323
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
++L + + GE+V + G ++ + GL E++G RV +TP++E G G +G A +G
Sbjct: 16 EMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLR 75
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ AFD IVN AAK Y SG Q C + R P A A HSQ+ A
Sbjct: 76 PIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTA 134
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
++H PG+KVV P KGL+L+ I+D +P IF E ++LY + DVP+ +P K
Sbjct: 135 CYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSK 193
Query: 196 ADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKT 255
A IL G++VT++ + QV + +V + + + CE+IDL +I P D +++ +S +KT
Sbjct: 194 AKILKEGSNVTIVTFSIQVKLALDVVNILQND-NIDCELIDLRTIKPLDTDSIIESVKKT 252
Query: 256 GRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKW 313
R++I E +G GA +A+ + + F L+API V+G D P P+ E +P
Sbjct: 253 NRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSAN 312
Query: 314 RCLEAVKQITRY 325
+EAVK++ Y
Sbjct: 313 DLIEAVKKVCYY 324
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 172/312 (55%), Gaps = 6/312 (1%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
+++ + GE+V + G ++ + GL E++G RV +TP++E G G +G A +G
Sbjct: 16 EMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLR 75
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ AFD IVN AAK Y SG Q C + R P A A HSQ+ A
Sbjct: 76 PIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCP-IVFRGPNGAASRVAAQHSQNYTA 134
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
++H PG+KVV P KGL+L+ I+D +P IF E ++LY + DVPE +P +
Sbjct: 135 CYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPETIEPIPFGQ 193
Query: 196 ADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKT 255
A IL G+ VT++ + QV + + A + + + CEVIDL +I P D +T+ +S +KT
Sbjct: 194 AKILREGSSVTIVTFSIQVKLALDAANVLQND-NIDCEVIDLRTIKPLDTDTIIESVKKT 252
Query: 256 GRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKW 313
R++I E +G GA +A+ + + F L+API V+G D P P E +P +
Sbjct: 253 NRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSES 312
Query: 314 RCLEAVKQITRY 325
+EAVK++ Y
Sbjct: 313 DVIEAVKKVCYY 324
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 172/312 (55%), Gaps = 6/312 (1%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
+++ + GE+V + G ++ + GL E++G RV +TP++E G G +G A +G
Sbjct: 16 EMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLR 75
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ AFD IVN AAK Y SG Q C + R P A A HSQ+ A
Sbjct: 76 PIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTA 134
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
++H PG+KVV P KGL+L+ I+D +P +F E ++LY + DVP+ +P +
Sbjct: 135 CYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF-DVPKTIEPIPFGQ 193
Query: 196 ADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKT 255
A IL G+ VT++ + QV + + A + + CEVIDL +I P D ET+ +S +KT
Sbjct: 194 AKILREGSSVTIVTFSIQVKLALDAANFVQND-NIDCEVIDLRTIKPLDTETIIESVKKT 252
Query: 256 GRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKW 313
R+++ E +G GA +A+ + + F L+API V+G D P P+ E +P +
Sbjct: 253 NRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSES 312
Query: 314 RCLEAVKQITRY 325
+EAVK++ Y
Sbjct: 313 DVIEAVKKVCYY 324
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 6/312 (1%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
++L + GE+V + G ++ + GL E++G RV +TP++E G G +G A +G
Sbjct: 16 EMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLR 75
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ AFD IVN AAK Y SG Q C + R P A A HSQ+ A
Sbjct: 76 PIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTA 134
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
++H PG+KVV P KGL+L+ I+D +P IF E ++LY + DVP+ +P K
Sbjct: 135 CYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSK 193
Query: 196 ADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKT 255
A IL G++VT++ + QV + +V + + + CE+IDL +I P D + +S +KT
Sbjct: 194 AKILKEGSNVTIVTFSIQVKLALDVVNILQND-NIDCELIDLRTIKPLDTNMIIESVKKT 252
Query: 256 GRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKW 313
R++I E +G GA +A+ + + F L+API V+G D P P+ E +P
Sbjct: 253 NRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSAN 312
Query: 314 RCLEAVKQITRY 325
+EAVK++ Y
Sbjct: 313 DLIEAVKKVCYY 324
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 172/308 (55%), Gaps = 15/308 (4%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GEDVG +GG ++ + L KYG RV +TP++E G IG A++G I E
Sbjct: 26 VIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMS 85
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
++ AF+QI N A RY SG F+ L IR P HSQ EAYF PG+K
Sbjct: 86 FLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLK 144
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V PY AKGLL S I+D +P +FFE +LY E++P++ Y LPL+K + + G D
Sbjct: 145 IVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPQEEYFLPLNKVEFVRKGKD 203
Query: 205 VTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHE 263
+T++ + + HV++ + L KE G EVIDL+S+ P D +++ S +KT +V+I E
Sbjct: 204 ITILTYSRMRHHVIQALPALLKE--GYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEE 261
Query: 264 APLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--------IFEPFYIPDKWRC 315
T+G GAEL A I + F L+AP+ R++ D P P+ + +P I D +
Sbjct: 262 CMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVKS 321
Query: 316 -LEAVKQI 322
+ +VK I
Sbjct: 322 IITSVKAI 329
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 167/301 (55%), Gaps = 8/301 (2%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GEDVG +GG ++ + L KYG RV +TP++E G IG A++G + E
Sbjct: 27 VLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLS 86
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
++ AF+QI N A Y SG +S L IR P + HSQ EAYF PG+K
Sbjct: 87 FLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLK 145
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V PY AKGLL + I+D +P +F E +LY +++P+ Y LPLDKA ++ G+D
Sbjct: 146 IVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-QEIPKQEYVLPLDKAQVVREGSD 204
Query: 205 VTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHE 263
VT+I + +H V++ V L + G++ EVIDL+S+ P D ET+ S KT + II E
Sbjct: 205 VTIITYSRMLHHVMQAVKQLVAQ--GMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEE 262
Query: 264 APLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIPDKWRCLEAVKQ 321
T G AE+ A I F L+APIRR++ D P P+ E + + +EAVK
Sbjct: 263 CMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVKT 322
Query: 322 I 322
+
Sbjct: 323 L 323
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 172/309 (55%), Gaps = 6/309 (1%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
+++ + GE+V + G ++ + GL E++G RV +TP++E G G +G A +G
Sbjct: 16 EMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLR 75
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ A D IVN AAK Y SG Q C + R P A A HSQ+ A
Sbjct: 76 PIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCP-IVFRGPNGAASRVAAQHSQNYAA 134
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
+++ PG+KVV P KGL+++ I+D +P IF E ++LY + D+ E+ +P K
Sbjct: 135 CYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSF-DISENVEPIPFGK 193
Query: 196 ADILVAGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKT 255
A +L G VT++ + QV + + A + + ++CEVIDL +I P D +T+ +S +KT
Sbjct: 194 AKVLKEGDSVTIVTFSIQVKLALDAANILQSD-NINCEVIDLRTIKPLDIDTIIESVKKT 252
Query: 256 GRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKW 313
GR+++ E +G GA +AA + + F L+AP+ V+G D P P+ E +P ++
Sbjct: 253 GRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPYAVNLEKLALPSEY 312
Query: 314 RCLEAVKQI 322
+ AVK++
Sbjct: 313 DVINAVKKV 321
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 169/310 (54%), Gaps = 7/310 (2%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
++ +++ + GE+V + G ++ + GL +++G RV +TP++E G G G+G A++G
Sbjct: 151 EMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLR 210
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ A DQI+N AAK Y SG Q + R P A A HSQ A
Sbjct: 211 PIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGA-PIVFRGPSGAAARVAAQHSQCYAA 269
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDK 195
+++H PG+KVV+P AKGLL + I+D +P IF E ++LY + E D + LP+ K
Sbjct: 270 WYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGK 329
Query: 196 ADILVAGTDVTLIGWGT-QVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARK 254
A I G D TL+ +G + ++ A L E G+ E+IDL +I P D TV +S +K
Sbjct: 330 ARIHRTGKDATLVSFGIGMTYAIKAAAEL--EAQGIDVEIIDLRTIRPMDLPTVIESVKK 387
Query: 255 TGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDK 312
TGR++ E S G E+A + + F L+API + G D P P+ E +P+
Sbjct: 388 TGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNV 447
Query: 313 WRCLEAVKQI 322
++AVK +
Sbjct: 448 AEVVDAVKAV 457
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 10/303 (3%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
L GE+VG + G ++ S GL +KYG RV +TP++E G G +G A G + E +
Sbjct: 65 LMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRPVVEFMTFN 124
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+ A D I+N AAK Y S Q S + R P A HSQ A++AH PG+K
Sbjct: 125 FSMQAIDHIINSAAKSNYMSAGQISV-PIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLK 183
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAV---EDVPEDYYELPLDKADILVA 201
V++P A+GLL + I+D DP +F E ++LY + +V + + LP+ KA I
Sbjct: 184 VLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISAEVLDSSFALPIGKAKIERE 243
Query: 202 GTDVTLIGWGTQV-HVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVII 260
G DVT+ + V + L+ L+KE G+S EVI+L SI P DR T+ S RKT R++
Sbjct: 244 GKDVTITAYSKMVGYALQAADILSKE--GISAEVINLRSIRPLDRATINASVRKTNRLVT 301
Query: 261 AHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEA 318
E+ G GAE+ S+ ++ F L+AP+ R+ G D P P+ E +P + A
Sbjct: 302 IEESFPQHGIGAEICMSVVEESFEYLDAPVERIAGADVPMPYAANLERMAVPQVDDIVRA 361
Query: 319 VKQ 321
K+
Sbjct: 362 AKR 364
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 161/303 (53%), Gaps = 10/303 (3%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
L GE+VG + G ++ S GL +KYG RV +TP++E G G G+G A G + E +
Sbjct: 63 LMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGFTGIGVGAAYQGLRPVVEFMTFN 122
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+ A D I+N AAK Y S Q + + R P A HSQ A++AH PG+K
Sbjct: 123 FSMQAIDHIINSAAKSNYMSAGQINV-PIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLK 181
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAV---EDVPEDYYELPLDKADILVA 201
V+ P A+GLL + I+D DP +F E ++LY + +V + + LP+ KA I
Sbjct: 182 VLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEQE 241
Query: 202 GTDVTLIGWGTQV-HVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVII 260
G DVT+ + V + L+ L+KE G+S EVI+L SI P DR T+ S RKT R++
Sbjct: 242 GKDVTITAFSKMVGYALQAAEILSKE--GISAEVINLRSIRPLDRATINASVRKTNRLVT 299
Query: 261 AHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEA 318
E G GAE+ S+ + F L+AP+ R+ G D P P+ E +P + A
Sbjct: 300 LEEGFPQHGVGAEICMSVVEDSFEYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 359
Query: 319 VKQ 321
K+
Sbjct: 360 AKR 362
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 8/304 (2%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GED+G +GG ++ + GL EKYG R+ +TP++E G IG A++G I E
Sbjct: 26 VIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMG 85
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
++ AF+QI N A Y SG F+ L +R P HSQ E+YF PG++
Sbjct: 86 FLLLAFNQIANNAGMLHYTSGGNFTT-PLVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQ 144
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V PY AKGL+ S I+ ++P IFFE +LY E++P+ Y +PL+KA+++ +G
Sbjct: 145 MVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENIPQKEYLVPLEKAELVRSGNQ 203
Query: 205 VTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHE 263
+T++ + + HVL+ L ++ G E+ID++S+ P D T+ S RKT +V+I E
Sbjct: 204 ITILTYSRMRYHVLQAAKTLIEK--GYDPEIIDIISLKPLDMGTISTSLRKTHKVLIVEE 261
Query: 264 APLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIPDKWRCLEAVKQ 321
T G G L ++I + F L+ PI ++ D P P+ E + + +EA ++
Sbjct: 262 CMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTPYNGFLEDLTVIQPSQIVEAAEK 321
Query: 322 ITRY 325
I Y
Sbjct: 322 IILY 325
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 11/305 (3%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
L GE+V + G ++ S GL +++G+ RV +TP++E G G +G A+ G I E +
Sbjct: 61 LIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFN 120
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPC-MAVGHGALYHSQSPEAYFAHTPGI 143
+ A D +VN AAK Y SG C + R P AVG GA HSQ ++ PG+
Sbjct: 121 FSMQAIDHVVNSAAKTHYMSGGTQKC-QMVFRGPNGAAVGVGA-QHSQDFSPWYGSIPGL 178
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDY---YELPLDKADILV 200
KV++P A+GLL + I+D +P +F E ++LY + E E + LP KA I
Sbjct: 179 KVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIER 237
Query: 201 AGTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVII 260
GTD++++ + V E A + +++ GVS EVI+L SI P D E + ++ +KT +I
Sbjct: 238 EGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLIT 297
Query: 261 AHEAPLTSGFGAELAASI-QDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLE 317
+ G GAE+ A + + + F L+API+RVTG D P P+ E F PD ++
Sbjct: 298 VESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVK 357
Query: 318 AVKQI 322
AVK++
Sbjct: 358 AVKEV 362
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 10/303 (3%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GE+VG + G ++ + GL EKYG RV++TP++E G G G+G A +G + E +
Sbjct: 58 VMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFN 117
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+ A D I+N AAK Y S Q + + R P A HSQ A++A PG+K
Sbjct: 118 FSMQAIDHIINSAAKSNYMSAGQINV-PIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLK 176
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAV---EDVPEDYYELPLDKADILVA 201
V+ P A+GLL + I+D DP +F E ++LY + E+ + + LP+ KA I
Sbjct: 177 VLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIERE 236
Query: 202 GTDVTLIGWGTQV-HVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVII 260
G DVT++ + V L+ LA+E G+S EVI+L SI P DR T+ S RKT R++
Sbjct: 237 GKDVTIVTFSKMVGFALKAAEKLAEE--GISAEVINLRSIRPLDRATINASVRKTSRLVT 294
Query: 261 AHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEA 318
E G AE+ AS+ ++ F L+AP+ R+ G D P P+ E +P + A
Sbjct: 295 VEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRA 354
Query: 319 VKQ 321
K+
Sbjct: 355 SKR 357
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 165/303 (54%), Gaps = 6/303 (1%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
++ GEDVG +GG ++ + G EKYG R+ +TP++E G IG A++G I E
Sbjct: 25 LVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNM 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
++ AF+QI N A Y SG F + IR P HSQ E+YF PG+
Sbjct: 85 GFLLLAFNQIANNAGMLHYTSGGNFKIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
++V PY KGLL S I++ +P IFFE +LY E++ E Y L L+KA+++ G
Sbjct: 144 QMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYNLN-ENLIEQEYLLCLEKAEVVRPGN 202
Query: 204 DVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHE 263
D+T++ + H + + A + + G E+ID++S+ P D T+ S RKT +V+I E
Sbjct: 203 DITILTYSRMRHHVLQAAKVLVNK-GYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEE 261
Query: 264 APLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEAVKQ 321
T G GA L A+I + F L+API+ ++ D P P+ E + + ++AV++
Sbjct: 262 CMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEE 321
Query: 322 ITR 324
+ +
Sbjct: 322 MCK 324
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 166/302 (54%), Gaps = 8/302 (2%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
++ GEDVG +GG ++ + G EKYG R+ +TP++E G IG A++G + E
Sbjct: 25 LVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNM 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
++ AF+QI N A Y SG F+ + IR P HSQ E+YF PG+
Sbjct: 85 GFLLLAFNQIANNAGMLHYTSGANFTI-PIVIRGPGGVGRQLGAEHSQRLESYFQSVPGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
++V P AKGL+ S I+ ++P I FE +LY E +P++ Y + L+KA+I+ GT
Sbjct: 144 QLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK-ETIPDNEYLVCLEKAEIVRPGT 202
Query: 204 DVTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAH 262
D+T++ + + HVL+ L + G E+ID+VS+ P D T+ S +KT +V+I
Sbjct: 203 DITILTYSRMRHHVLQATKSLVYK--GYDPEIIDIVSLKPVDLGTISTSIKKTHKVLIVE 260
Query: 263 EAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEAVK 320
E T G GA L A+I + F L+API ++ D P P+ E + + ++AV+
Sbjct: 261 ECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQDVPTPYSGPLEELTVIQPAQIVQAVE 320
Query: 321 QI 322
Q+
Sbjct: 321 QL 322
>sp|O44451|ODPB_CAEEL Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2
Length = 352
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 164/303 (54%), Gaps = 9/303 (2%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
L GE+V + G ++ S GL +K+G RV +TP++E G G +G A +G I E +
Sbjct: 47 LMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFN 106
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+ A DQI+N AAK Y S + + R P A A HSQ A++AH PG+K
Sbjct: 107 FSMQAIDQIINSAAKTYYMSAGRVPV-PIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLK 165
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAV---EDVPEDYYELPLDKADILVA 201
VV P AKGLL + I+D +P +F E ++LY + ++V D + +P+ KA I A
Sbjct: 166 VVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERA 225
Query: 202 GTDVTLIGWGTQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIA 261
G VT++ + V E A E +GVS EVI+L S+ P+D E++ QS KT ++
Sbjct: 226 GDHVTIVSYSRGVEFSLEAAK-QLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSV 284
Query: 262 HEAPLTSGFGAELAASIQDK-CFLSLEAPIRRVTGYDTPFPH--IFEPFYIPDKWRCLEA 318
+G G+E+AA + + F L+AP+ RVTG D P P+ E +P ++A
Sbjct: 285 ETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKA 344
Query: 319 VKQ 321
VK+
Sbjct: 345 VKK 347
>sp|P27746|ACOB_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoB PE=1 SV=3
Length = 338
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 156/286 (54%), Gaps = 8/286 (2%)
Query: 28 GEDVGFGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFADYIF 87
GE +GGV + GL K+G R+ +TPLSE VG IG A G IAE+ F D++
Sbjct: 40 GEKDAWGGVLGVTKGLYAKHGD-RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMG 98
Query: 88 PAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIKVVI 147
FDQI N+AAK+RY G + + IRA A A HSQ F H PG+KVV
Sbjct: 99 VCFDQIFNQAAKFRYMFGGKAET-PVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVC 157
Query: 148 PRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTDVTL 207
P PY KGLL+ I+D DP IF E K LY E VPE Y +P +A+I+ G DV++
Sbjct: 158 PSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLEGE-VPEGAYAIPFGEANIVRDGKDVSI 216
Query: 208 IGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHEAPL 266
+ +G VH L A LAKE G+ E++DL ++ P D +TV +S TGR+++ EA
Sbjct: 217 VTYGLMVHRALEAAATLAKE--GIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASP 274
Query: 267 TSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIP 310
+++A + + F +L+A I V TP P E YIP
Sbjct: 275 RCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIP 320
>sp|O66113|ODPB_ZYMMO Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhB PE=3 SV=2
Length = 462
Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 9/302 (2%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GE+V + G ++ + GL +++G RV +TP+SE G G G+G A+ G + E +
Sbjct: 161 VMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMN 220
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
+ A D I+N AAK Y SG Q C + R P A H+Q+ ++A PG+
Sbjct: 221 FSMQAIDHIINSAAKTHYMSGGQVRC-PIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLV 279
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPE-DYYELPLDKADILVAGT 203
V+ P AKGLL + I+ DP +F E ++LY DVP+ D + LP+ KA I+ G
Sbjct: 280 VLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTF-DVPKMDDFVLPIGKARIIREGK 338
Query: 204 DVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAH 262
DVT++ + V L LAKE G+ EVIDL ++ P D+ET+ QS KT R++
Sbjct: 339 DVTIVSYSIGVSFALTAAEALAKE--GIDAEVIDLRTLRPLDKETILQSLAKTNRIVTVE 396
Query: 263 EAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEAVK 320
+ +E+AA ++ F +L+AP+ RVT DTP P+ E + + +EAV+
Sbjct: 397 DGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPTPYAENLEKKGLVNPEAIIEAVR 456
Query: 321 QI 322
++
Sbjct: 457 KV 458
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 163/302 (53%), Gaps = 8/302 (2%)
Query: 25 VLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFA 83
++ GEDVG +GG ++ + G E+YG R+ +TP++E G IG A++G + E
Sbjct: 25 MVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNM 84
Query: 84 DYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGI 143
++ AF+QI N A Y SG F+ + IR P HSQ E+YF PG+
Sbjct: 85 GFLLLAFNQIANNAGMLHYTSGGNFTI-PIVIRGPGGVGRQLGAEHSQRLESYFQSVPGL 143
Query: 144 KVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGT 203
++V PY AKGL+ S I+ +P I FE +LY ED+ E+ Y + L+KA+++ G
Sbjct: 144 QMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLK-EDLAEEEYLVCLEKAEVVRPGN 202
Query: 204 DVTLIGWGTQVH-VLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAH 262
D+T++ + H VL+ L + G E+ID+VS+ P+D T+ S KT +V+I
Sbjct: 203 DITILTYSRMRHNVLQATKSLVYK--GYDPEIIDIVSLKPFDLGTIGASVCKTHKVLIVE 260
Query: 263 EAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYIPDKWRCLEAVK 320
E T G GA L A+I + F L+API ++ D P P+ E + + ++ V+
Sbjct: 261 ECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPTPYSSPLEELTVIQPNQIIQVVE 320
Query: 321 QI 322
Q+
Sbjct: 321 QL 322
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 167/315 (53%), Gaps = 10/315 (3%)
Query: 17 QLLSSQGGVLFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGAT 75
+L + + GE+V + G ++ + GL +KYG R+ +TP++E G G G+G A++G
Sbjct: 42 ELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTR 101
Query: 76 AIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEA 135
I E ++ A D I+N +AK Y SG + + R P HSQ A
Sbjct: 102 PIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKV-FNPIVWRGPNGPPTAVGAQHSQCFAA 160
Query: 136 YFAHTPGIKVVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLY--RAAVEDVPEDY-YELP 192
++ PG+KVV P +GLL S I+D +P ++ E ++LY + + D +D Y +P
Sbjct: 161 WYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVP 220
Query: 193 LDKADILVAGTDVTLIGWGTQVHVLREVAG-LAKEQLGVSCEVIDLVSILPWDRETVFQS 251
+ KA + G DVT++G+ V E A LAKE G+S EVI+L +I P D ET+ S
Sbjct: 221 IGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKE--GISAEVINLRTIRPIDAETIVNS 278
Query: 252 ARKTGRVIIAHEAPLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPHI--FEPFYI 309
+KT +++ E SG GAE++A + + F L+API R+ G D P P+ E +
Sbjct: 279 LKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAM 338
Query: 310 PDKWRCLEAVKQITR 324
+ A K++T+
Sbjct: 339 VQTQNIVNAAKRVTQ 353
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 8/301 (2%)
Query: 26 LFGEDVG-FGGVFRCSLGLQEKYGKHRVFNTPLSEQGIVGFGIGLAVSGATAIAEIQFAD 84
+ GEDVG +GG ++ + GL +K+G RV +TP+ E G GIG A++G + E
Sbjct: 108 VMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMG 167
Query: 85 YIFPAFDQIVNEAAKYRYRSGNQFSCGNLTIRAPCMAVGHGALYHSQSPEAYFAHTPGIK 144
++ AF+QI N Y SG QF+ + IR P HSQ E+YF PGI+
Sbjct: 168 FLLLAFNQISNNCGMLHYTSGGQFTI-PVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQ 226
Query: 145 VVIPRGPYKAKGLLLSCIKDKDPCIFFEPKVLYRAAVEDVPEDYYELPLDKADILVAGTD 204
+V PY AKGL+ + I+ ++P I FE +LY E +P++ Y L++A+++ G
Sbjct: 227 MVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-EKIPDEDYVCNLEEAEMVRPGEH 285
Query: 205 VTLIGWG-TQVHVLREVAGLAKEQLGVSCEVIDLVSILPWDRETVFQSARKTGRVIIAHE 263
+T++ + + HV++ L + G EVID+ S+ P+D T+ S +KT RV+I E
Sbjct: 286 ITILTYSRMRYHVMQAAKTLVNK--GYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEE 343
Query: 264 APLTSGFGAELAASIQDKCFLSLEAPIRRVTGYDTPFPH--IFEPFYIPDKWRCLEAVKQ 321
T G GA L A+I + L+AP+ ++ D P P+ E + + + + AV+Q
Sbjct: 344 CMRTGGIGASLTAAINENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 403
Query: 322 I 322
+
Sbjct: 404 L 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,774,983
Number of Sequences: 539616
Number of extensions: 5506743
Number of successful extensions: 11595
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 11043
Number of HSP's gapped (non-prelim): 606
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)