RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8700
(200 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 137 bits (346), Expect = 4e-42
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSH 66
+++++ G GVGK+ ++ RF + F ++I TI ++ + I + LQI DT G
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F + +LVY T+ +S + +R I E + A + M++GNKC
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-----HASADVEKMILGNKC 121
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEK 183
D + R+VS GE A +G FMETSAK N NV+ F L R+I +++K
Sbjct: 122 DVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA-----RDIKAKMDK 173
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 135 bits (341), Expect = 2e-41
Identities = 140/174 (80%), Positives = 151/174 (86%), Gaps = 3/174 (1%)
Query: 6 NDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGS 65
NDYRV VFGAGGVGKSSLVLRFVKGTFRESYIPT+EDTYRQVISC+K+ICTLQITDTTGS
Sbjct: 1 NDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGS 60
Query: 66 HQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
HQFPAMQRLSISKGHAFILVYS TSRQSLEEL+PI+E I E KG IPIMLVGNK
Sbjct: 61 HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVES---IPIMLVGNK 117
Query: 126 CDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISL 179
CDE+ +REV ++E EA A+ W C FMETSAK NHNVKELF ELLNLEK R +SL
Sbjct: 118 CDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSL 171
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 130 bits (328), Expect = 2e-39
Identities = 80/163 (49%), Positives = 110/163 (67%), Gaps = 4/163 (2%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+Y+VVV G+GGVGKS+L ++FV GTF E Y PTIED YR+ I + + L+I DT G+
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTE 62
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
QF +M+ L I G FILVYS ++QS ++++P+ + I K +P++LVGNK
Sbjct: 63 QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEK----VPVILVGNKV 118
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
D REVS++EG A A+ WGC FMETSAK+ V ELFAE++
Sbjct: 119 DLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIV 161
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 126 bits (316), Expect = 1e-37
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQ-VISCNKNICTLQITDTTGSH 66
++VV+ G GVGKS+L+ RF + F TI + I + QI DT G
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
++ + +LVY + E + + +R+ ++I IMLVGNK
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD-----SNIVIMLVGNKS 119
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKKGQ 186
D R V E A A+ F+ETSA + NV+E F +L I ++ + Q
Sbjct: 120 DLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL-----TEI-YRIVSQKQ 173
Query: 187 L 187
+
Sbjct: 174 I 174
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 125 bits (315), Expect = 2e-37
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSH 66
++++ G GVGKS L++RFV+ F S+I TI ++ + + N LQI DT G
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F + ILVY T ++ ++ ++ + E ++LVGNK
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHAND-----EAQLLLVGNKS 117
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
D R V+A +GEA AK G F+E+SAK + NV E+F L L + +
Sbjct: 118 DME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 165
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 126 bits (316), Expect = 3e-37
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSH 66
+++++ G GVGKS L+LRF T+ YI TI ++ + + + LQI DT G
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F + H I+VY T ++S ++ + I ++ +LVGNKC
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATS-----TVLKLLVGNKC 121
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKKGQ 186
D + R V + A F+ETSA + NV++ F + R I + ++
Sbjct: 122 DLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMA-----RQIKESMSQQNL 176
Query: 187 LKGTRKLKEKCSV 199
+ T+K ++K +V
Sbjct: 177 NETTQKKEDKGNV 189
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 124 bits (313), Expect = 3e-37
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDT-YRQVISCNKNICTLQITDTTGSH 66
++ ++ G GVGKS L+ +F + F TI ++I + LQI DT G
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F A+ R ++VY T R + L R I+L+GNK
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNT-----VIILIGNKA 119
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
D R+V+ E + A+ G F+E SAKT NV++ F E
Sbjct: 120 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAA 162
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 122 bits (306), Expect = 4e-36
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
++V++ G+GGVGKS+L L+F+ F E Y PT D+YR+ + + + I DT G
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQED 64
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ A++ G F+ V+S T +S E I K N +P +LVGNK D
Sbjct: 65 YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDEN----VPFLLVGNKSD 120
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
+ R+VS E + A W +++ETSAKT NV ++F +L+ + R
Sbjct: 121 LEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 121 bits (303), Expect = 1e-35
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISCNKNICTLQITDTTGSH 66
+++V+ G GVGK+ LV RF +G F TI D + + N LQI DT G
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F ++ + +A IL Y T +S L I + + +LVGNK
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASN-----KVITVLVGNKI 120
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
D E REVS E ++ +++ETSAK + NV++LF +L
Sbjct: 121 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDL 162
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 121 bits (303), Expect = 1e-35
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISCNKNICTLQITDTTGSH 66
++ ++ G GVGKS L+L+F F+ + TI + ++++ + LQI DT G
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
F ++ R +LVY T R++ L E R+ +++ IML+GNK
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSS-----SNMVIMLIGNKS 118
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
D R+V EGEA A+ G FMETSAKT NV+E F
Sbjct: 119 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTA 161
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 119 bits (298), Expect = 6e-35
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRE-SYIPTIEDTYR-QVISCNKNICTLQITDTTGS 65
++V++ G GVGK+ L++RF G F ++I T+ +R +V+ + LQ+ DT G
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 66 HQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
+F ++ HA +L+Y T++ S + ++ I E + +ML+GNK
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQH-----DVALMLLGNK 121
Query: 126 CDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
D R V +GE AK +G FMETSAKT NV F +
Sbjct: 122 VDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA 165
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 118 bits (297), Expect = 1e-34
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQ-----------VISCNKNICT 56
+++ G GVGK++ + R+ F +I T+ +R+ S
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELAS 116
LQ+ DT G +F ++ F+L++ TS+QS +R ++ +
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN----AYCEN 121
Query: 117 IPIMLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
I+L+GNK D + REV+ + A +G + ETSA T NV++ LL+L R
Sbjct: 122 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 180
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 117 bits (294), Expect = 2e-34
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 9/169 (5%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQIT 60
M E Y++VV GAGGVGKS+L ++ ++ F + Y PTIED+YR+ + + C L I
Sbjct: 1 MTE----YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL 56
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIM 120
DT G ++ AM+ + G F+ V++ + +S E++ E I+ K + +P++
Sbjct: 57 DTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDD----VPMV 112
Query: 121 LVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
LVGNKCD + + + A+ +G ++ETSAKT V++ F L+
Sbjct: 113 LVGNKCDLAARTV-ESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV 160
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 117 bits (294), Expect = 3e-34
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSH 66
++ +V G G GKS L+ +F++ F++ TI + ++I+ LQI DT G
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F ++ R +LVY TSR++ L R +I I+L GNK
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-----QNIVIILCGNKK 120
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
D +REV+ E A+ F+ETSA T NV+E F + N+
Sbjct: 121 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK 169
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 117 bits (293), Expect = 3e-34
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSH 66
+++++ G VGK+S + R+ +F +++ T+ ++ + I N LQI DT G
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
++ + FIL+Y T+ +S ++ I+ + ++LVGNKC
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT-----YSWDNAQVLLVGNKC 120
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN--LEK 173
D + R VS+ G A G F E SAK N NVK+ F L++ EK
Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 116 bits (291), Expect = 6e-34
Identities = 70/164 (42%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+Y++VV G+GGVGKS+L ++FV+G F E Y PTIED+YR+ + + C L+I DT G+
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTE 62
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
QF AM+ L + G F LVYS T++ + +L+ + E I K + +P++LVGNKC
Sbjct: 63 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTED----VPMILVGNKC 118
Query: 127 DETENREVSAAEGEAEAKMW-GCHFMETSAKTNHNVKELFAELL 169
D + R V +G+ A+ W C F+E+SAK+ NV E+F +L+
Sbjct: 119 DLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 116 bits (290), Expect = 9e-34
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNI-CTLQITDTTGSH 66
+++V G VGK+SL+ RF+ +F +Y TI + ++ LQ+ DT G
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F ++ I A ++VY T+ S ++ + +R +G + + IMLVGNK
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-----SDVIIMLVGNKT 115
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
D + R+VS EGE +AK F+ETSAK +NVK+LF +
Sbjct: 116 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRV 157
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 115 bits (289), Expect = 2e-33
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISCNKNICTLQITDTTGSH 66
++++ G GVGKSSL+LRF TF TI D + IS + N L I DT G
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 67
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F + ILVY T R + +L + + + ++
Sbjct: 68 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRND-----IVNMLVGNK 122
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
+ ENREV EG A+ F+E SAKT V+ F EL+
Sbjct: 123 IDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVE 166
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 113 bits (282), Expect = 2e-32
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKN-ICTLQITDTTGSH 66
++VV+ G G VGK+SLVLR+ + F + +I T+ ++ L I DT G
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F A+ + + ILVY T S ++++ + +R+ G + +VGNK
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEI-----CLCIVGNKI 118
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
D + R VS E E+ A+ G TSAK N ++ELF +L
Sbjct: 119 DLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLC 161
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 110 bits (276), Expect = 2e-31
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITD 61
P S +++VV G GGVGKS+L ++F++ F Y PTIED+Y ++ S + L I D
Sbjct: 1 PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILD 60
Query: 62 TTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIML 121
T G +F AM+ + GH F+LV++ RQS E+ ++ I K + P++L
Sbjct: 61 TAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDD----FPVVL 116
Query: 122 VGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
VGNK D R+V +E A + E SAK NV E F +L+
Sbjct: 117 VGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLV 164
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 109 bits (273), Expect = 6e-31
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 18/178 (10%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT 63
+ VV G G VGK+ L++ + F YIPT+ D Y + + L + DT
Sbjct: 2 SPQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 61
Query: 64 GSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
G + ++ LS + ++ +S S S E +R W + PI+LVG
Sbjct: 62 GQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCP-----NTPIILVG 116
Query: 124 NKCDETENREVS------------AAEGEAEAKMWG-CHFMETSAKTNHNVKELFAEL 168
K D ++++ +G A AK G ++E SA T +K +F E
Sbjct: 117 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEA 174
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 108 bits (271), Expect = 7e-31
Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT 63
YR+VV G GGVGKS+L ++F++ F Y PTIED+Y + + L I DT
Sbjct: 2 MQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTA 61
Query: 64 GSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
G +F AM+ + G F+LV+S T R S EE+ I K P++L+G
Sbjct: 62 GQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDE----FPMILIG 117
Query: 124 NKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNL 171
NK D R+V+ EG+ A+ +ME SAK NV + F EL+ +
Sbjct: 118 NKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRV 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 108 bits (270), Expect = 1e-30
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKN-ICTLQITDT 62
+S+ ++V++ G GGVGKSSL+ R+V F TI + T+QI DT
Sbjct: 3 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 62
Query: 63 TGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLV 122
G +F +++ +L +S QS + L + E S P +++
Sbjct: 63 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIY-YADVKEPESFPFVIL 121
Query: 123 GNKCDETENREVSAAEGEAEAK-MWGCHFMETSAKTNHNVKELFAELL 169
GNK D +E R+VS E +A + + ETSAK NV F E +
Sbjct: 122 GNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAV 168
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 107 bits (268), Expect = 2e-30
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISC-NKNICTLQITDTTGSH 66
+++V+ G VGKSSLVLRFVKG F E TI + C + +I DT G
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
++ ++ + A I+VY T+ +S + + ++ +I I L GNK
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-----PNIVIALSGNKA 121
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL-NLEKN 174
D R V E ++ A FMETSAKT+ NV E+F + L KN
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 170
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 108 bits (269), Expect = 3e-30
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 31/206 (15%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
+ VV G G VGK+ L++ + F Y+PT+ D Y + TL + DT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ ++ LS + F++ +S S S E ++ W P +LVG + D
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-----KTPFLLVGTQID 118
Query: 128 ETENREVSA------------AEGEAEAKM-WGCHFMETSAKTNHNVKELFAELLNLEKN 174
++ E A+ ++E SA T +K +F E
Sbjct: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA------ 172
Query: 175 RNISLQLEKKGQLKGTRKLKEKCSVM 200
I LE K +C ++
Sbjct: 173 --ILAALEPPEPKK-----SRRCVLL 191
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 105 bits (263), Expect = 9e-30
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQIT 60
+P Y++VV G GGVGKS+L ++F + F Y PTIED+Y + + L +
Sbjct: 2 LPT----YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVL 57
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIM 120
DT G +F AM+ + G F++VYS T + S E + ++I K + P++
Sbjct: 58 DTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRES----FPMI 113
Query: 121 LVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKT-NHNVKELFAELLNLEKNR 175
LV NK D R+V+ +G+ A + ++ETSAK NV + F +L+ + + +
Sbjct: 114 LVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 104 bits (260), Expect = 3e-29
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ ++ +FG GVGKS+LV+RF+ F Y PT+E TYR + + + +++I DT G
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 61
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+ + G F+LVY T R S EE+ P+ ++ E K N + ++LVGNK
Sbjct: 62 DTI-QREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKN----VTLILVGNKA 116
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNH-NVKELFAELLNLEKNRNI 177
D +R+VS EGE A C F E SA T N+ E+F EL + R +
Sbjct: 117 DLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRM 168
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 103 bits (258), Expect = 5e-29
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISC-NKNICTLQITDTTGSH 66
++++V G VGK+ L RF G F + TI +R+ + +Q+ DT G
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 67 QFPAMQR-LSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
+F HA + VY T+ S L E ++ + IP +LVGNK
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAND----IPRILVGNK 118
Query: 126 CDETENREVSAAEGEAEAKMWGCHFMETSAKT---NHNVKELFAEL 168
CD +V + A ETSAK N +V+ +F L
Sbjct: 119 CDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 101 bits (253), Expect = 5e-28
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
+ VV G G VGK+ L++ + F E Y+PT+ D Y ++ L + DT G
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ ++ LS F++ +S + S + ++ W + ++P +L+G + D
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-----NVPFLLIGTQID 124
Query: 128 ETENRE------------VSAAEGEAEAKMWG-CHFMETSAKTNHNVKELFAELL 169
++ + + +G+ AK G C ++E SA T +K +F E +
Sbjct: 125 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 100 bits (250), Expect = 9e-28
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISCNKNICTLQITDTTGS 65
+ +V + G GVGKSS++ RFV+ +F + PTI + + + I DT G
Sbjct: 4 ELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGL 63
Query: 66 HQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
+F A+ + A I+VY T ++ L+ +R+ + + + GNK
Sbjct: 64 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSI-----VVAIAGNK 118
Query: 126 CDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
CD T+ REV + + A F+ETSAK N+ ELF E+
Sbjct: 119 CDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEI 161
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 99.3 bits (246), Expect = 4e-27
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
++V+ G G GK+ L++ K F E Y+PT+ + Y I + L + DT G
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ ++ LS ++ +S S SLE + W + + ++PI+LVGNK D
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-----HFCPNVPIILVGNKKD 117
Query: 128 ETENREV------------SAAEGEAEAKMWGC-HFMETSAKTNHNVKELFAEL 168
+ EG A G +ME SAKT V+E+F
Sbjct: 118 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 171
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 99.4 bits (246), Expect = 5e-27
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKN-ICTLQITDTTGSH 66
+V++ G GVGK+SL+ ++V F Y TI + + + T+QI DT G
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F ++ +LV+ T+ + + L + + + + P +++GNK
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI-QASPRDPENFPFVVLGNKI 121
Query: 127 DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKK 184
D + + + ETSAK NV++ F + + ++L +
Sbjct: 122 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE 179
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 99.0 bits (245), Expect = 5e-27
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNK-NICTLQITDTTGSHQ 67
++V+ G VGKSS+VLRFV F E+ PTI + + +I DT G +
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
F ++ + A ++VY T QS + R + + E I I LVGNK D
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHE-----QASKDIIIALVGNKID 119
Query: 128 ---ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
E R+V+ EGE A+ G F ETSAKT NV ++F +
Sbjct: 120 MLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIG 164
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 98.7 bits (244), Expect = 6e-27
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT 63
QS ++ + G VGKSSL ++FV+G F +SY PTIE+T+ ++I+ N LQ+ DT
Sbjct: 1 QSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTA 60
Query: 64 GSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
G ++ + + +ILVYS TS +S E ++ I + + G IPIMLVG
Sbjct: 61 GQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQ----IPIMLVG 116
Query: 124 NKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
NK D R +S EG+A A+ W F+E+SAK N ++F ++
Sbjct: 117 NKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRII 162
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 96.2 bits (238), Expect = 7e-26
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 13/182 (7%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ R+ V G GKSSL+ RF+ G++ + T + Y++ + + + I
Sbjct: 5 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIR-----E 58
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+ A A I V+S S + + + + +G ++ ++ ++
Sbjct: 59 EAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRI 118
Query: 127 DETENREVSAAEGEAEAK-MWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKKG 185
+ R V A A M C + ET A NV +F E+ + + + L K+
Sbjct: 119 SASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVA-----QKV-VTLRKQQ 172
Query: 186 QL 187
QL
Sbjct: 173 QL 174
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 95.2 bits (235), Expect = 1e-25
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKN-ICTLQITDTTGSHQ 67
++VV G G VGKSS++ R+ KG F + Y TI + + + L + DT G +
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
F A+ + A +LV+S T R+S E + E + G IP LV NK D
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGD------IPTALVQNKID 117
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
++ + E E AK F TS K + NV E+F L
Sbjct: 118 LLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYL 158
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 95.5 bits (236), Expect = 1e-25
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQF 68
++VV G GK++L+ F K F E+Y+PT+ + Y + L + DT+GS +
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 69 PAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDE 128
++ LS A ++ + + ++L+ + W+ + + ++LVG K D
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCP-----NTKMLLVGCKSDL 118
Query: 129 TEN------------REVSAAEGEAEAKMWG-CHFMETSAKTNHN-VKELFAEL 168
+ VS +G AK G ++E SA + N V+++F
Sbjct: 119 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 172
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 95.1 bits (235), Expect = 2e-25
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 6 NDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR--QVISCNKNICTLQITDTT 63
N +V++ G GVGK+SL+ R+V + + Y TI + +V + T+Q+ DT
Sbjct: 1 NILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTA 60
Query: 64 GSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
G +F ++ +LVY T+ S E W N + P +++G
Sbjct: 61 GQERFQSLGVAFYRGADCCVLVYDVTNASSFEN-IKSWRDEFLVHANVNSPETFPFVILG 119
Query: 124 NKCDETENREVSAAEGEAE--AKMWGCHFMETSAKTNHNVKELFAELLN--LEKNR 175
NK D E++++ + + E + TSAK NV F E+ L++N+
Sbjct: 120 NKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ 175
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 94.0 bits (232), Expect = 3e-25
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
Y+V++ GA GVGKS+L F TY + I + +L + D
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGP-EAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 60
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ ++ G A+++VYS T + S E+ + +R + + +PI+LVGNK D
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDD----VPIILVGNKSD 116
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKK 184
+REVS EG A A ++ C F+ETSA +HNV+ LF ++ R I L+ + K
Sbjct: 117 LVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVV-----RQIRLRRDSK 168
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 92.4 bits (228), Expect = 2e-24
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISCNKNICTLQITDTTGS 65
+++V+ G GG GK++ V R + G F + Y+ T+ + + V N+ + DT G
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 62
Query: 66 HQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
+F ++ + I+++ TSR + + + + +IPI+L GNK
Sbjct: 63 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE------NIPIVLCGNK 116
Query: 126 CDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL-NLEKNRNISL 179
D + + A+ + + + SAK+N+N ++ F L L + N+
Sbjct: 117 VDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEF 169
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 92.1 bits (227), Expect = 2e-24
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
YRVV+ G GVGKS+L F + + + + I
Sbjct: 4 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 63
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ Y + +R A + IPI+LVGNK D
Sbjct: 64 KGENEW-LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSD 122
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
REVS +EG A A ++ C F+ETSA HNVKELF ++ + R
Sbjct: 123 LVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR 170
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 91.3 bits (225), Expect = 4e-24
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 11/165 (6%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQF 68
R+++ G GK++++ + G + TI V + + + D G +
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEI----VTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 69 PAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC-- 126
+ R I V R+ + E R + + +++ NK
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD----AVLLVFANKQDL 113
Query: 127 -DETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
+ E++ G + + T A + + E L N
Sbjct: 114 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSN 158
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 91.2 bits (225), Expect = 5e-24
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 11/169 (6%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTG 64
+ + R+++ G GK++++ + G + TI V + + D G
Sbjct: 10 NKEMRILMLGLDAAGKTTILYKLKLGQS----VTTIPTVGFNVETVTYKNVKFNVWDVGG 65
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGN 124
+ + R + I V C R ++E R I + + I++ N
Sbjct: 66 QDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRD----AIILIFAN 121
Query: 125 KCDETENR---EVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
K D + E+ G + + + A + + E L +
Sbjct: 122 KQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTS 170
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 86.2 bits (212), Expect = 5e-22
Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 11/169 (6%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTG 64
+ R+++ G GK++L+ + + S L + D G
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQ----GFNIKSVQSQGFKLNVWDIGG 69
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGN 124
+ R I V R+ EE + E + + +P+++ N
Sbjct: 70 QRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSC----VPVLIFAN 125
Query: 125 KCD---ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
K D E++ + SA T V++ +
Sbjct: 126 KQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCK 174
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 83.5 bits (205), Expect = 6e-21
Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 11/167 (6%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+++V++ G GK++++ +F + + N + D G
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDIGGQE 70
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+ + I+V T R+ + R + +L +++ NK
Sbjct: 71 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAH----EDLRKAGLLIFANKQ 126
Query: 127 DETEN---REVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
D E E+S K H A T + + +++
Sbjct: 127 DVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMS 173
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 82.4 bits (202), Expect = 9e-21
Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 10/170 (5%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ + + G GK++ V G F E IPT+ R++ N I ++ D G
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTI---KLWDIGGQP 58
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+F +M A + + ++ +E + + + IP++++GNK
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQG----IPVLVLGNKR 114
Query: 127 D---ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEK 173
D + +E+ + + S K N+ L+ K
Sbjct: 115 DLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSK 164
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 81.6 bits (200), Expect = 2e-20
Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 11/172 (6%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ R+++ G GK++++ +F ++ PT+ + L I D G
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDV-DTISPTLGFNIKT---LEHRGFKLNIWDVGGQK 57
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+ R I V RQ +++ + + + + A +++ NK
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAG----ATLLIFANKQ 113
Query: 127 DETENREVS---AAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
D + A + SA T ++ LL+ +R
Sbjct: 114 DLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 165
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 80.0 bits (196), Expect = 1e-19
Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 11/174 (6%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ R+++ G G GK++++ R G + PTI + KN+ L + D G
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVETL--SYKNL-KLNVWDLGGQT 72
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
R + A I V T + + ++ + EL +++ NK
Sbjct: 73 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQE----EELQDAALLVFANKQ 128
Query: 127 DETEN---REVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNI 177
D+ EVS E K + +SA + E L+++ K +
Sbjct: 129 DQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQL 182
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 76.7 bits (187), Expect = 2e-18
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 11/174 (6%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTG 64
+ + R+++ G G GK++++ R G + TI V + Q+ D G
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEV----VTTIPTIGFNVETVTYKNLKFQVWDLGG 58
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGN 124
R S A I V R + + + E EL +++ N
Sbjct: 59 LTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEE----EELRKAILVVFAN 114
Query: 125 KCDETENR---EVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
K D + E++ + G K +TSA + E L+ K+R
Sbjct: 115 KQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 168
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 70.1 bits (170), Expect = 6e-16
Identities = 23/170 (13%), Positives = 47/170 (27%), Gaps = 18/170 (10%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQF 68
+++ G GK++L+ + PT T D G Q
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-ATLQPTWHPTS---EELAIGNIKFTTFDLGGHIQA 57
Query: 69 PAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDE 128
+ + + + + + + +E R + + EL +P +++GNK D
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIA----ELKDVPFVILGNKIDA 113
Query: 129 TENREVS----------AAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
+ + S + E F L
Sbjct: 114 PNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 163
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 68.1 bits (165), Expect = 5e-15
Identities = 25/192 (13%), Positives = 48/192 (25%), Gaps = 40/192 (20%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ ++++ GAG GKS++V + + I ++ D G
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETH--------FTFKDLHFKMFDVGGQR 53
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKG------GANELASIPIM 120
A I + + + + E+ I+
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSII 113
Query: 121 LVGNKCDETENREVSAAEGEAEAKMWG--------------------------CHFMETS 154
L NK D E + + + G + T
Sbjct: 114 LFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC 173
Query: 155 AKTNHNVKELFA 166
A NV+ +F
Sbjct: 174 ATDTKNVQFVFD 185
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 67.8 bits (164), Expect = 5e-15
Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 23/178 (12%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
++V G GK++L+ + PT+ T ++ T + Q
Sbjct: 14 GKLVFLGLDNAGKTTLLHMLKDDRLGQHV-PTLHPTSEELTIAGMTFTTFDLGGH---IQ 69
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
+ + + + + + C + L E + + + +A++PI+++GNK D
Sbjct: 70 ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTD----ETIANVPILILGNKID 125
Query: 128 ETENREVS---------------AAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
E + E S E F +
Sbjct: 126 RPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQ 183
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 62.7 bits (151), Expect = 6e-13
Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 5/177 (2%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR--QVISCNKNICTLQITDTTGSHQ 67
V+ G GK+ L +R + G +R++ +I D+ +V + N TL S +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESLR 61
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
F + R S +V S ++ ++++ + S +++ NK D
Sbjct: 62 FQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKN--SPSLLIACNKQD 119
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKK 184
+ + + E ++ ++A + + L + QL K
Sbjct: 120 IAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLK 176
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 60.3 bits (145), Expect = 3e-12
Identities = 23/194 (11%), Positives = 56/194 (28%), Gaps = 37/194 (19%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ ++++ G G GKS+ + + S +PT + + D G
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIEYPFDLQSVIFR---MVDVGGQR 56
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELAS------IPIM 120
+ + + + + + + E+K + + ++
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVI 116
Query: 121 LVGNKCDETENREVSAAEGEAEAKMWG--------------------------CHFMETS 154
L NK D E + + + + + G + T
Sbjct: 117 LFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTC 176
Query: 155 AKTNHNVKELFAEL 168
A N++ +FA +
Sbjct: 177 ATDTENIRFVFAAV 190
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 56.8 bits (136), Expect = 6e-11
Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 14/176 (7%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
++++ GAG GKS+ + + PT ++ D G
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIH---EYDFEIKNVPFKMVDVGGQRS 56
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELR------PIWEVIRETKGGANELASIPIML 121
+ + + S + + I ET +++ I+L
Sbjct: 57 ERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIIL 116
Query: 122 VGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNI 177
NK D E + + + + + E F ++ R +
Sbjct: 117 FLNKTDLLEEKVQVVSIKDYFLE--FEGDPHCLRDVQKFLVECFRGKRRDQQQRPL 170
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 57.1 bits (137), Expect = 7e-11
Identities = 24/134 (17%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
+R+++ GAG GKS++V + + T + + D G
Sbjct: 7 HRLLLLGAGESGKSTIVKQMRILHV----VLTS---GIFETKFQVDKVNFHMFDVGGQRD 59
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSL----EELRPIWEVIRETKGGANE--LASIPIML 121
+ A I V + +S + + + E + K N L +I ++L
Sbjct: 60 ERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVIL 119
Query: 122 VGNKCDETENREVS 135
NK D + ++
Sbjct: 120 FLNKQDLLAEKVLA 133
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 55.0 bits (131), Expect = 3e-10
Identities = 22/196 (11%), Positives = 53/196 (27%), Gaps = 10/196 (5%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTG 64
S +++ G GK+SL+ + R + + + +
Sbjct: 1 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLR 60
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGN 124
++ + +V S + L I + E I I++ N
Sbjct: 61 YKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCE-NGIDILIACN 119
Query: 125 KCDETENREVSAAEGEAEAKM--------WGCHFMETSAKTNHNVKELFAELLNLEKNRN 176
K + R S + E+++ + +E + ++L
Sbjct: 120 KSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTL-DVLQSTDGFK 178
Query: 177 ISLQLEKKGQLKGTRK 192
+ +G+
Sbjct: 179 FANLEASVVAFEGSIN 194
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 50.9 bits (120), Expect = 8e-09
Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 16/182 (8%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTL----------QI 59
++ G VGKS+L+ R R P + ++ N I + +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANEL--ASI 117
+ + +LV + + + I L I
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 118 PIMLVGNKCDETENREVS----AAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEK 173
P ++ NK D+ +N + A + E F+ SAK N++ L + + +
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVIR 182
Query: 174 NR 175
R
Sbjct: 183 ER 184
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 45.1 bits (105), Expect = 8e-07
Identities = 22/168 (13%), Positives = 45/168 (26%), Gaps = 5/168 (2%)
Query: 9 RVVVFGAGGVGKSSLV--LRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
+ + G VGKSS + L K R S P T I ++
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 67 QFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKC 126
+ + + +LR + IP++++ K
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 127 DETENREVSAAEGEAEAKM---WGCHFMETSAKTNHNVKELFAELLNL 171
D+ + + + S++T E + + +
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKM 192
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 44.4 bits (103), Expect = 1e-06
Identities = 22/163 (13%), Positives = 41/163 (25%), Gaps = 7/163 (4%)
Query: 9 RVVVFGAGGVGKSSLVLRFV-KGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQ 67
+VV+ G GKSSL+ + + I + + I
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 68 FPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCD 127
++R+ I + I + +
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIA------RLPAKLPIT 116
Query: 128 ETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLN 170
N+ E +++ G + SA+T V L L
Sbjct: 117 VVRNKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQ 159
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 44.7 bits (104), Expect = 1e-06
Identities = 25/187 (13%), Positives = 51/187 (27%), Gaps = 16/187 (8%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGT------------FRESYIPTIEDTYRQVIS 49
PE ++ +V + G VGKS+L + I+ +
Sbjct: 3 PEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVD 62
Query: 50 CNKNICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKG 109
++ T SI K ++V T + ++ R + R +
Sbjct: 63 TAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRA 122
Query: 110 GANELASIPIMLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
++ E E + E + + TSA N+ + +
Sbjct: 123 SVVVFNKWDLV----VHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMN 178
Query: 170 NLEKNRN 176
+
Sbjct: 179 LAYASYT 185
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 44.3 bits (103), Expect = 1e-06
Identities = 26/162 (16%), Positives = 43/162 (26%), Gaps = 1/162 (0%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
V + G VGKS+L+ + R + + DT G H+
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 70 AMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDET 129
+ + L ++ P L +L+ +
Sbjct: 68 DALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 127
Query: 130 ENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNL 171
A + + SA V EL A+LL L
Sbjct: 128 AKYPEEAMK-AYHELLPEAEPRMLSALDERQVAELKADLLAL 168
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 43.9 bits (102), Expect = 2e-06
Identities = 25/162 (15%), Positives = 48/162 (29%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
+ + G VGKS+L+ + + + +R V + DT G H
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 70 AMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDET 129
+ A + + E E + I+ V +
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQ 127
Query: 130 ENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNL 171
E ++ ++M + SA+T NV + A +
Sbjct: 128 EKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKH 169
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 43.6 bits (101), Expect = 4e-06
Identities = 21/169 (12%), Positives = 37/169 (21%), Gaps = 6/169 (3%)
Query: 6 NDYRVVVFGAGGVGKSSLV--LRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT 63
V G GKSS + L K R S P +
Sbjct: 15 TGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGY 74
Query: 64 GSHQFPA----MQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPI 119
+ L L L+ + + + E +N + +
Sbjct: 75 AEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLL 134
Query: 120 MLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAEL 168
+++ A S+ V +L +L
Sbjct: 135 TKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKL 183
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 41.3 bits (95), Expect = 2e-05
Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 2/171 (1%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
V++ G VGKS+L + VK + T ++ DT G P
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 70 AMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDET 129
K ++ + + + E+ +++ +LV NK +
Sbjct: 63 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENL 122
Query: 130 ENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQ 180
E + + SA+ N N+ + ++ + + + L+
Sbjct: 123 REFEREV--KPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDLE 171
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 38.4 bits (88), Expect = 2e-04
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 13/175 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT----- 63
V + G VGKS+L+ + + T + +
Sbjct: 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFT--TLVPNLGMVETDDGRSFVMADLPGLI 60
Query: 64 -GSHQFPAMQR---LSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPI 119
G+HQ + I + + V + + + + +E L P
Sbjct: 61 EGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQ 120
Query: 120 MLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKN 174
++V NK D E E E E SA T ++EL E+ N +N
Sbjct: 121 IIVANKMDMPEAAEN--LEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLEN 173
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 38.1 bits (87), Expect = 2e-04
Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 9/168 (5%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQIT--DTTGSH 66
V + G GKSSL+ + + + P T + + + T D G
Sbjct: 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPF--TTLSPNLGVVEVSEEERFTLADIPGII 60
Query: 67 QFPAMQR---LSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
+ + + L + A V + E L+ + + +E L P ++
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVAL 120
Query: 124 NKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNL 171
NK D E V G + SA T + L L L
Sbjct: 121 NKVDLLEEEAV--KALADALAREGLAVLPVSALTGAGLPALKEALHAL 166
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 38.3 bits (88), Expect = 3e-04
Identities = 17/144 (11%), Positives = 39/144 (27%), Gaps = 16/144 (11%)
Query: 3 EQSNDYRVVVFGAGGVGKSSLVLRFVK----------GTFRESYIPTIEDTYRQVISCNK 52
E N ++V G GGVGKSS V + + + + +
Sbjct: 28 EDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDT 87
Query: 53 NICTLQITDTTGSHQFPAMQR-LSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGA 111
L ++ L + V + + + + + I ++ G
Sbjct: 88 --PGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFG-- 143
Query: 112 NELASIPIMLVGNKCDETENREVS 135
+ ++ + +
Sbjct: 144 -KGIWNKAIVALTHAQFSPPDGLP 166
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 38.2 bits (88), Expect = 3e-04
Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 13/125 (10%)
Query: 9 RVVVFGAGGVGKSSLV--LRFVKGTFRESYIPTIEDTYRQVISC-NKNICTLQITDTTG- 64
V V G G GKSS + LR + + + + + + NI + D G
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGI 117
Query: 65 -SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG 123
S FP L K + + ++ + + I + I K V
Sbjct: 118 GSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMK--------KEFYFVR 169
Query: 124 NKCDE 128
K D
Sbjct: 170 TKVDS 174
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 37.9 bits (87), Expect = 4e-04
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 38/222 (17%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVK----------------GTFRESYIPTIEDTY 44
MP N R+ V G G GKS+ + F + + T
Sbjct: 48 MPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTR 107
Query: 45 RQVISCNKNICTLQITDTTGSHQFPAMQR----LSISKGHAFILVYSCTSRQS---LEEL 97
++ + + + R L + G+ ++V + QS + +
Sbjct: 108 MNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARM 167
Query: 98 RPIWEVIRETKGGANELASIPIML------VGNKCDETENREVSAAEGEAEAKM------ 145
+ ++ GG + ++ V NK D + V+ A E+ +
Sbjct: 168 VDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRK 227
Query: 146 ---WGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKK 184
W + SA + E++ +++ + S +L++
Sbjct: 228 YDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQV 269
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 37.6 bits (86), Expect = 5e-04
Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 45/226 (19%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKG---------------TFRESYIPTIEDTYR 45
+P+ RV + G GVGKS+ + + + + D R
Sbjct: 45 LPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTR 104
Query: 46 QV-ISCNKNICTLQITDTTGSHQFPAMQR----LSISKGHAFILVYSCTSRQS------- 93
++ ++N + A R L + G ILV + QS
Sbjct: 105 MARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADL 164
Query: 94 -----LEELRPIWEVIRETKGGANELASIPIMLVGNKCDETENREVSAAEGEAEAKM--- 145
+ L + ++ K G ELA M+ NK D+ + ++A
Sbjct: 165 TDFFLVLMLPGAGDELQGIKKGIFELAD---MIAVNKADDGDGERRASAAASEYRAALHI 221
Query: 146 -------WGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKK 184
W + S + L++ + + + ++ K
Sbjct: 222 LTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATGEIAGK 267
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 34.2 bits (77), Expect = 0.005
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 23/170 (13%)
Query: 9 RVVVFGAGGVGKSSLVLRFV--KGTFRESYIPTIEDTYRQVISCNKNICTLQ-----ITD 61
R+V+ G VGKS+L+ R + T D + I + + ++
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 62 TTGSHQFPAMQR--LSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPI 119
T + ++R I K + V +S E+ + + +
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKN-----------KRY 110
Query: 120 MLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
++V NK D E H ++ SA +++L +
Sbjct: 111 LVVINKVDVVEKINEEE---IKNKLGTDRHMVKISALKGEGLEKLEESIY 157
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 33.8 bits (76), Expect = 0.005
Identities = 20/171 (11%), Positives = 50/171 (29%), Gaps = 6/171 (3%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
++ G GVGKS+ + + S + V+ +
Sbjct: 5 YIITGPAGVGKSTTC-KRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNIT 63
Query: 70 AMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVG-----N 124
+ + + +L Y ++ + + + + + L + L+
Sbjct: 64 DLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRK 123
Query: 125 KCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNR 175
K ++ R + E + +F TS N+ ++ L +
Sbjct: 124 KDEQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLKTNPRFI 174
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 32.6 bits (73), Expect = 0.017
Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 2/130 (1%)
Query: 36 YIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLE 95
Y+ K + + D G A + ILV +
Sbjct: 67 YVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQP 126
Query: 96 ELRPIWEVIRETKGGANELASIPIMLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSA 155
+ R + + + + +V + ++ R++ A+ + SA
Sbjct: 127 QTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAE--NVPIIPVSA 184
Query: 156 KTNHNVKELF 165
N+ L
Sbjct: 185 LHKINIDSLI 194
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 30.4 bits (67), Expect = 0.12
Identities = 14/130 (10%), Positives = 33/130 (25%), Gaps = 3/130 (2%)
Query: 44 YRQVISCNKNICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEV 103
++ + + + Q + F++ + R +
Sbjct: 87 RKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVHE-GRP 145
Query: 104 IRETKGGANELASIPIMLVGNKCDETENREVSAAEGEAEAKMWG--CHFMETSAKTNHNV 161
ET + + + + E +E + + SA T +
Sbjct: 146 FMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPISAITGEGI 205
Query: 162 KELFAELLNL 171
EL L+ L
Sbjct: 206 PELLTMLMGL 215
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.1 bits (66), Expect = 0.16
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
+V G GKSS++ +
Sbjct: 32 TLVLGLRRTGKSSIIKIGIN 51
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 28.8 bits (63), Expect = 0.29
Identities = 6/47 (12%), Positives = 19/47 (40%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNIC 55
+V+ GAGG + ++G ++ + + ++ + +
Sbjct: 20 TMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 66
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 28.7 bits (63), Expect = 0.36
Identities = 16/119 (13%), Positives = 39/119 (32%), Gaps = 6/119 (5%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
VFG G VG S+++ + G R I + + + T +
Sbjct: 32 CAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK---AKALGATDCLNPRELDKPVQ 88
Query: 70 AMQRLSISKGHAFILVYSCTS---RQSLEELRPIWEVIRETKGGANELASIPIMLVGNK 125
+ + G + L + T+ + +++ W +E+ + ++ +
Sbjct: 89 DVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR 147
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 28.0 bits (61), Expect = 0.72
Identities = 7/20 (35%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 5 SNDYRVVVF-GAGGVGKSSL 23
N++ +++ G GGVGK+++
Sbjct: 17 RNEHGLIMLMGKGGVGKTTM 36
>d1vqov1 a.2.2.1 (V:1-65) Ribosomal protein L29 (L29p) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 65
Score = 26.1 bits (58), Expect = 0.80
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 161 VKELFAELLNLEKNRNISLQLEKKGQLKGTRK 192
+ +L ELLN + E G++K RK
Sbjct: 20 LDDLKTELLNARAVQAAGGAPENPGRIKELRK 51
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.6 bits (60), Expect = 0.94
Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 24/182 (13%)
Query: 10 VVVFGAGGVGKSSLVLRFVKG--------------------TFRESYIPTIEDTYRQVIS 49
+V+ G G GKS+L+ + + Y D ++ +I
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 63
Query: 50 CNKNICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKG 109
N+ I Q + +++++S S + + + +
Sbjct: 64 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPP 123
Query: 110 GANELASIPIMLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
+L G + +E+ N+ +SAA+ E G H N ++ + + EL
Sbjct: 124 SVEDLKKRLEG-RGTETEESINKRLSAAQAELAYAETGAHDKVI---VNDDLDKAYKELK 179
Query: 170 NL 171
+
Sbjct: 180 DF 181
>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 26.9 bits (58), Expect = 1.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 8 YRVVVFGAGGVGKSSLVL 25
+ ++ G+G GK L+L
Sbjct: 133 HENIIHGSGATGKMILLL 150
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 27.6 bits (60), Expect = 1.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 9 RVVVFGAGGVGKSSLV 24
+V ++G GG+GKS+
Sbjct: 3 QVAIYGKGGIGKSTTT 18
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 27.6 bits (60), Expect = 1.1
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 1 MPEQSNDYRVVVF-GAGGVGKSSLV 24
M N + F G GGVGK+S+
Sbjct: 1 MQFLQNIPPYLFFTGKGGVGKTSIS 25
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 27.3 bits (59), Expect = 1.2
Identities = 14/143 (9%), Positives = 33/143 (23%), Gaps = 1/143 (0%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 69
+ GG GKS L L+ + + + +
Sbjct: 32 GALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGA 91
Query: 70 AMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIM-LVGNKCDE 128
+ +L+ ++ ++ G + + + +
Sbjct: 92 HLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENA 151
Query: 129 TENREVSAAEGEAEAKMWGCHFM 151
+ EA A GC +
Sbjct: 152 SGPMAQVIGRMEAIAADTGCSIV 174
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 26.9 bits (58), Expect = 1.3
Identities = 24/182 (13%), Positives = 53/182 (29%), Gaps = 26/182 (14%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCN------------------ 51
VV+ G VGKS++V + + + + +
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQ 64
Query: 52 --KNICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKG 109
S R + + G ++ +++++ P +
Sbjct: 65 GELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPP 124
Query: 110 GANELASIPIMLVGNKCDETENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELL 169
+L + I G + + R + A E A+ + N ++ AEL+
Sbjct: 125 SWQDLQARLIG-RGTETADVIQRRLDTARIELAAQGDFDKVV-----VNRRLESACAELV 178
Query: 170 NL 171
+L
Sbjct: 179 SL 180
>d1x9ia_ c.80.1.1 (A:) Glucose-6-phosphate isomerase, conjectural
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 300
Score = 27.2 bits (59), Expect = 1.3
Identities = 10/159 (6%), Positives = 38/159 (23%), Gaps = 10/159 (6%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQF 68
R+ + G GG S +V ++ + ++ + ++ + + +
Sbjct: 38 RLYISGMGG---SGVVADLIRDFSLTWNWEVEVIAVKDYFLKARDGLLIAVSYSGNTIET 94
Query: 69 PAMQRLSISKGHAFILVYS-CTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNK-- 125
+ + + + + Q + + L + ++
Sbjct: 95 LYTVEYAKRRRIPAVAITTGGRLAQMGVPTVIVPKASAPRAALPQLLTAALHVVAKVYGI 154
Query: 126 ----CDETENREVSAAEGEAEAKMWGCHFMETSAKTNHN 160
+ E + E + +
Sbjct: 155 DVKIPEGLEPPNEALIHKLVEEFQKRPTIIAAESMRGVA 193
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 26.5 bits (58), Expect = 1.5
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI 40
MP N +VV+ G G VG S +G E I +
Sbjct: 2 MP---NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein
HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 26.4 bits (57), Expect = 1.9
Identities = 11/101 (10%), Positives = 29/101 (28%), Gaps = 3/101 (2%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTG 64
+ + +V+V G+GG+ K+ + G + + I
Sbjct: 15 NKNAKVIVHGSGGMAKAVVAAFKNSGF---EKLKIYARNVKTGQYLAALYGYAYINSLEN 71
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIR 105
+ SI + + ++ ++V+
Sbjct: 72 QQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA 112
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 26.1 bits (57), Expect = 2.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
V++ G G+GKS L +
Sbjct: 18 VLLTGRSGIGKSECALDLIN 37
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 25.8 bits (55), Expect = 2.7
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 4/96 (4%)
Query: 10 VVVFGAGGVGKSSLVLRFVK---GTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSH 66
++ G G GKS+ F+ G + + + + TG
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQ 64
Query: 67 QFPAMQRL-SISKGHAFILVYSCTSRQSLEELRPIW 101
A L I+ + + +
Sbjct: 65 FDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFA 100
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.1 bits (56), Expect = 2.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR 45
VV+ G G GKS+L+ + + + ++ T R
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQ-EHSSIFGFSVSHTTR 37
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 26.0 bits (56), Expect = 2.9
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 9 RVVVFGAGGVGKSSLV 24
+ ++G GG+GKS+
Sbjct: 4 QCAIYGKGGIGKSTTT 19
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 25.6 bits (56), Expect = 3.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
V++ G GVGKS L V+
Sbjct: 17 VLITGDSGVGKSETALELVQ 36
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 25.7 bits (56), Expect = 3.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
V++ G G+GKS L +K
Sbjct: 18 VLITGDSGIGKSETALELIK 37
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 25.7 bits (55), Expect = 3.7
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 10 VVVFGAGGVGKSSLVLRFV----KGTFRESYIPTIEDTYRQVI 48
+V G G GK+ ++F+ T E+T + +I
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDII 71
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 25.6 bits (55), Expect = 4.6
Identities = 23/183 (12%), Positives = 46/183 (25%), Gaps = 17/183 (9%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISCNKNICTLQITDTTGSHQF 68
+V G GKSSL+ +K ++ T R +
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMI 64
Query: 69 PAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIMLVGNKCDE 128
L ++ S + + + + + +G +P
Sbjct: 65 SRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPP 124
Query: 129 T--------ENREVSAAEGEAEAKMWGCHFMETSAK-----TNHNVKELFAELLNL---E 172
+ R + E A+ M A+ N + +L + E
Sbjct: 125 SKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAE 184
Query: 173 KNR 175
+ R
Sbjct: 185 RLR 187
>d1xbwa_ d.58.4.5 (A:) Hypothetical protein IsdG {Staphylococcus
aureus [TaxId: 1280]}
Length = 109
Score = 24.9 bits (54), Expect = 4.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 65 SHQFPAMQRLSISKGHAFILVYSCTSRQSLEELR 98
+ +F A RL+++KG A ++ +R +E L
Sbjct: 2 TMKFMAENRLTLTKGTAKDIIERFYTRHGIETLE 35
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 195
Score = 25.2 bits (54), Expect = 5.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 9 RVVVFGAGGVG 19
V V GAG VG
Sbjct: 28 TVYVAGAGPVG 38
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 25.3 bits (54), Expect = 5.5
Identities = 18/176 (10%), Positives = 42/176 (23%), Gaps = 23/176 (13%)
Query: 19 GKSSLVLRF-----------------VKGTFRESYIPTIEDTYRQVISCNKNICTLQITD 61
GK++L +K F ++ I + R S C +
Sbjct: 17 GKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEF 76
Query: 62 TTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIML 121
A ++ + + P A ++ ++
Sbjct: 77 VRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNII 136
Query: 122 VGNKCDETENREVSAAEGEAEAKMWG------CHFMETSAKTNHNVKELFAELLNL 171
+ E ++E + + + SA N+ L + +
Sbjct: 137 IAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDF 192
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 25.0 bits (53), Expect = 6.0
Identities = 18/182 (9%), Positives = 44/182 (24%), Gaps = 13/182 (7%)
Query: 9 RVVVFGAGGVGKSSLV--------LRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQIT 60
V + G GKS LV RE + + + + L
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQ 68
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSCTSRQSLEELRPIWEVIRETKGGANELASIPIM 120
+ + I + + +
Sbjct: 69 RYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWV 128
Query: 121 LVGNKCDETENREVSAAEG-EAEAKMWGCHFMETSAKTNH----NVKELFAELLNLEKNR 175
G + ++ + + + + ++E + + VK + ++LN E+
Sbjct: 129 DDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEEIS 188
Query: 176 NI 177
+
Sbjct: 189 EL 190
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 177
Score = 25.0 bits (53), Expect = 6.1
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 6 NDYRVVVFGAGGVGKS 21
D +V++GAGG ++
Sbjct: 17 KDKNIVIYGAGGAARA 32
>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase
{Frog (Rana perezi) [TaxId: 8403]}
Length = 198
Score = 24.8 bits (53), Expect = 6.5
Identities = 2/11 (18%), Positives = 4/11 (36%)
Query: 9 RVVVFGAGGVG 19
++ G G
Sbjct: 184 ELLSSGQGVRS 194
>d1x9na1 a.235.1.1 (A:262-533) DNA ligase I (LIG1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 25.0 bits (54), Expect = 6.9
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 130 ENREVSAAEGEAEAKMWGCHFMETSAKTNHNVKELFAELLNLEKNRNISLQLEKKGQLKG 189
+E A +A + +K+ F E+ +L++ + L+ G
Sbjct: 211 PGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLE-------HG 263
Query: 190 TRKLKEKC 197
+L E C
Sbjct: 264 LERLPEHC 271
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 25.0 bits (53), Expect = 6.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
VV G G GK++L F +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGR 22
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE
{Haemophilus influenzae [TaxId: 727]}
Length = 171
Score = 24.5 bits (52), Expect = 8.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 6 NDYRVVVFGAGGVGKS 21
+ V++ GAGG K
Sbjct: 17 PNQHVLILGAGGATKG 32
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 24.7 bits (52), Expect = 8.7
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 11 VVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPA 70
++ G G GKSSL+ + G + I I+ + L ++
Sbjct: 27 LIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTKYRITR 86
Query: 71 MQRLSISKGHAFIL 84
S G +
Sbjct: 87 RFLKGYSSGEIHAM 100
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 24.4 bits (52), Expect = 9.2
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 10 VVVFGAGGVGKSSLVLRFVK 29
+V+ GA GVG+ + +
Sbjct: 6 LVLLGAHGVGRRHIKNTLIT 25
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE
{Escherichia coli [TaxId: 562]}
Length = 170
Score = 24.1 bits (51), Expect = 9.8
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 9 RVVVFGAGGVGKS 21
R+++ GAGG +
Sbjct: 20 RILLIGAGGASRG 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.377
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 693,005
Number of extensions: 29710
Number of successful extensions: 414
Number of sequences better than 10.0: 1
Number of HSP's gapped: 332
Number of HSP's successfully gapped: 127
Length of query: 200
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 119
Effective length of database: 1,295,466
Effective search space: 154160454
Effective search space used: 154160454
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)