Query psy8709
Match_columns 319
No_of_seqs 495 out of 2622
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 17:16:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 1.1E-31 3.9E-36 253.9 9.6 159 106-318 41-199 (376)
2 3q7e_A Protein arginine N-meth 99.9 7.8E-24 2.7E-28 199.2 11.3 158 108-318 26-183 (349)
3 1g6q_1 HnRNP arginine N-methyl 99.9 7.4E-24 2.5E-28 197.6 10.8 153 112-317 2-154 (328)
4 2fyt_A Protein arginine N-meth 99.9 2.2E-23 7.7E-28 195.4 14.0 158 107-317 23-180 (340)
5 3r0q_C Probable protein argini 99.9 9.9E-23 3.4E-27 193.5 14.0 157 108-318 23-179 (376)
6 2y1w_A Histone-arginine methyl 99.9 1.3E-21 4.5E-26 183.8 13.4 154 109-317 11-164 (348)
7 4gqb_A Protein arginine N-meth 99.8 1.5E-19 5.2E-24 180.3 11.1 115 202-318 358-477 (637)
8 3b3j_A Histone-arginine methyl 99.8 9.1E-19 3.1E-23 171.0 14.1 154 109-317 119-272 (480)
9 3p9n_A Possible methyltransfer 99.7 4.6E-18 1.6E-22 145.3 10.3 140 168-311 9-156 (189)
10 3kkz_A Uncharacterized protein 99.7 5.1E-17 1.7E-21 146.2 14.2 120 187-310 31-152 (267)
11 4gek_A TRNA (CMO5U34)-methyltr 99.7 4.1E-17 1.4E-21 147.3 12.6 109 199-310 68-180 (261)
12 3f4k_A Putative methyltransfer 99.7 6.9E-17 2.4E-21 144.0 13.1 120 187-310 31-152 (257)
13 1nkv_A Hypothetical protein YJ 99.7 6.3E-17 2.2E-21 144.2 12.3 122 185-310 20-142 (256)
14 3ua3_A Protein arginine N-meth 99.7 7.3E-18 2.5E-22 168.0 6.5 148 121-318 377-544 (745)
15 2ift_A Putative methylase HI07 99.7 4.3E-17 1.5E-21 141.1 10.5 140 169-312 20-167 (201)
16 2fpo_A Methylase YHHF; structu 99.7 3.3E-17 1.1E-21 142.0 8.8 144 164-312 16-164 (202)
17 2fhp_A Methylase, putative; al 99.7 2.4E-17 8.2E-22 139.7 7.8 138 171-312 13-158 (187)
18 3bus_A REBM, methyltransferase 99.7 1.2E-16 4.2E-21 143.7 12.8 122 186-310 46-168 (273)
19 2esr_A Methyltransferase; stru 99.7 4.4E-17 1.5E-21 137.4 8.7 130 179-312 8-142 (177)
20 3dlc_A Putative S-adenosyl-L-m 99.7 9.8E-17 3.4E-21 138.9 10.7 119 186-308 29-148 (219)
21 1vl5_A Unknown conserved prote 99.7 1.5E-16 5.2E-21 142.4 11.5 112 192-308 28-140 (260)
22 1pjz_A Thiopurine S-methyltran 99.7 8.2E-17 2.8E-21 139.6 9.3 109 196-306 17-138 (203)
23 3hem_A Cyclopropane-fatty-acyl 99.7 4.7E-16 1.6E-20 142.5 14.0 121 187-311 58-186 (302)
24 3jwh_A HEN1; methyltransferase 99.7 3.2E-16 1.1E-20 136.5 12.3 123 187-310 15-143 (217)
25 3ofk_A Nodulation protein S; N 99.7 2.1E-16 7.2E-21 137.4 10.4 118 187-309 37-155 (216)
26 3jwg_A HEN1, methyltransferase 99.7 4.4E-16 1.5E-20 135.7 11.9 123 187-310 15-143 (219)
27 2o57_A Putative sarcosine dime 99.7 3E-16 1E-20 143.2 11.3 120 187-310 64-189 (297)
28 3vc1_A Geranyl diphosphate 2-C 99.7 4.7E-16 1.6E-20 143.3 12.7 117 189-309 104-222 (312)
29 3g5l_A Putative S-adenosylmeth 99.6 4.6E-16 1.6E-20 138.6 10.9 114 190-310 33-147 (253)
30 3njr_A Precorrin-6Y methylase; 99.6 1.2E-15 4.2E-20 132.4 13.0 120 183-311 37-157 (204)
31 3fpf_A Mtnas, putative unchara 99.6 2.1E-15 7.1E-20 137.7 15.0 105 199-312 120-226 (298)
32 1ri5_A MRNA capping enzyme; me 99.6 9.8E-16 3.4E-20 139.2 12.7 112 199-310 62-176 (298)
33 3dh0_A SAM dependent methyltra 99.6 5E-16 1.7E-20 135.1 10.2 116 191-310 27-145 (219)
34 1xxl_A YCGJ protein; structura 99.6 6.5E-16 2.2E-20 136.8 11.1 114 191-309 11-125 (239)
35 3mgg_A Methyltransferase; NYSG 99.6 1.1E-15 3.7E-20 137.9 12.7 119 187-309 23-143 (276)
36 3thr_A Glycine N-methyltransfe 99.6 7.8E-16 2.7E-20 140.0 11.4 125 185-310 41-177 (293)
37 3ujc_A Phosphoethanolamine N-m 99.6 6.1E-16 2.1E-20 138.1 10.3 120 186-309 40-160 (266)
38 2gb4_A Thiopurine S-methyltran 99.6 9.7E-16 3.3E-20 137.5 11.5 106 200-307 67-190 (252)
39 4htf_A S-adenosylmethionine-de 99.6 1.1E-15 3.8E-20 138.7 12.0 105 202-310 69-175 (285)
40 2xvm_A Tellurite resistance pr 99.6 1.9E-15 6.5E-20 129.0 12.7 111 193-307 24-135 (199)
41 1kpg_A CFA synthase;, cyclopro 99.6 1.8E-15 6.2E-20 137.3 13.1 120 187-311 50-171 (287)
42 3mti_A RRNA methylase; SAM-dep 99.6 1.2E-15 4.2E-20 129.4 11.0 110 199-310 20-137 (185)
43 3e05_A Precorrin-6Y C5,15-meth 99.6 2.6E-15 8.9E-20 129.6 13.0 119 185-310 24-144 (204)
44 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.4E-15 4.6E-20 127.8 10.9 119 184-311 8-130 (178)
45 1y8c_A S-adenosylmethionine-de 99.6 1.5E-15 5E-20 133.9 11.4 119 188-310 22-144 (246)
46 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.1E-15 3.6E-20 135.9 10.3 118 188-309 80-198 (254)
47 4hg2_A Methyltransferase type 99.6 4.8E-16 1.6E-20 139.9 8.0 108 187-308 27-135 (257)
48 3g5t_A Trans-aconitate 3-methy 99.6 2.3E-15 7.8E-20 137.7 12.7 115 187-306 23-147 (299)
49 3ocj_A Putative exported prote 99.6 1.1E-15 3.8E-20 140.4 10.5 112 198-310 115-229 (305)
50 3lpm_A Putative methyltransfer 99.6 1.8E-15 6.1E-20 135.9 11.6 112 197-308 44-176 (259)
51 3g07_A 7SK snRNA methylphospha 99.6 1.3E-15 4.6E-20 139.2 10.5 111 200-310 45-222 (292)
52 2fk8_A Methoxy mycolic acid sy 99.6 4.4E-15 1.5E-19 136.9 13.9 120 187-311 76-197 (318)
53 1ve3_A Hypothetical protein PH 99.6 3.4E-15 1.2E-19 130.3 12.5 118 187-310 26-144 (227)
54 1wzn_A SAM-dependent methyltra 99.6 4E-15 1.4E-19 132.3 13.1 116 191-310 31-147 (252)
55 3dtn_A Putative methyltransfer 99.6 3.3E-15 1.1E-19 131.3 12.0 118 188-310 30-150 (234)
56 2yqz_A Hypothetical protein TT 99.6 3.8E-15 1.3E-19 132.8 12.2 104 198-307 36-140 (263)
57 2vdw_A Vaccinia virus capping 99.6 1.9E-15 6.3E-20 139.2 10.4 110 201-310 48-171 (302)
58 3sm3_A SAM-dependent methyltra 99.6 3E-15 1E-19 131.0 11.1 109 200-309 29-142 (235)
59 3m70_A Tellurite resistance pr 99.6 3.7E-15 1.3E-19 135.3 12.0 106 197-307 116-222 (286)
60 1dus_A MJ0882; hypothetical pr 99.6 5.1E-15 1.7E-19 125.4 12.1 120 188-311 39-160 (194)
61 1zx0_A Guanidinoacetate N-meth 99.6 1.3E-15 4.4E-20 134.7 8.7 109 199-309 58-171 (236)
62 2pxx_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 128.8 11.1 119 187-310 30-161 (215)
63 2p8j_A S-adenosylmethionine-de 99.6 3E-15 1E-19 129.1 10.1 108 199-310 21-130 (209)
64 3eey_A Putative rRNA methylase 99.6 4E-15 1.4E-19 127.5 10.7 112 198-309 19-140 (197)
65 3g2m_A PCZA361.24; SAM-depende 99.6 2.7E-15 9.3E-20 137.2 10.1 121 189-312 71-194 (299)
66 2ex4_A Adrenal gland protein A 99.6 2.5E-15 8.5E-20 133.1 9.5 120 188-309 65-186 (241)
67 2a14_A Indolethylamine N-methy 99.6 1.3E-15 4.5E-20 137.1 7.6 111 198-308 52-197 (263)
68 2p35_A Trans-aconitate 2-methy 99.6 7.7E-15 2.6E-19 130.7 12.2 113 187-309 19-133 (259)
69 3bkw_A MLL3908 protein, S-aden 99.6 3.8E-15 1.3E-19 131.3 9.8 112 192-310 34-146 (243)
70 3bgv_A MRNA CAP guanine-N7 met 99.6 6.3E-15 2.2E-19 135.7 11.6 110 201-310 34-157 (313)
71 3hnr_A Probable methyltransfer 99.6 2.6E-15 8.9E-20 130.6 8.5 109 193-309 37-146 (220)
72 3orh_A Guanidinoacetate N-meth 99.6 2E-15 6.9E-20 133.9 7.8 107 200-308 59-170 (236)
73 1ws6_A Methyltransferase; stru 99.6 9.8E-16 3.4E-20 127.7 5.5 123 182-312 20-151 (171)
74 2p7i_A Hypothetical protein; p 99.6 3.9E-15 1.3E-19 131.2 9.5 101 200-310 41-143 (250)
75 1l3i_A Precorrin-6Y methyltran 99.6 9.9E-15 3.4E-19 123.4 11.3 119 184-310 16-136 (192)
76 3ege_A Putative methyltransfer 99.6 2E-15 6.8E-20 135.5 7.2 116 183-310 16-132 (261)
77 2frn_A Hypothetical protein PH 99.6 6.6E-15 2.3E-19 133.8 10.7 104 200-311 124-228 (278)
78 3lbf_A Protein-L-isoaspartate 99.6 1.1E-14 3.6E-19 126.1 11.4 114 186-310 62-176 (210)
79 3ou2_A SAM-dependent methyltra 99.6 7.4E-15 2.5E-19 127.2 10.4 104 199-310 44-148 (218)
80 2yxd_A Probable cobalt-precorr 99.6 1.2E-14 4.2E-19 122.0 11.4 117 183-311 17-134 (183)
81 3evz_A Methyltransferase; NYSG 99.6 1.2E-14 4.2E-19 127.4 11.7 108 199-308 53-179 (230)
82 3h2b_A SAM-dependent methyltra 99.6 4.6E-15 1.6E-19 127.6 8.7 101 202-310 42-143 (203)
83 3lcc_A Putative methyl chlorid 99.6 5.1E-15 1.7E-19 130.4 9.0 105 202-309 67-172 (235)
84 2ozv_A Hypothetical protein AT 99.6 6.6E-15 2.3E-19 132.5 9.7 114 197-310 32-172 (260)
85 3gu3_A Methyltransferase; alph 99.6 1.7E-14 5.8E-19 131.1 12.5 117 188-310 8-128 (284)
86 3d2l_A SAM-dependent methyltra 99.6 1.5E-14 5.2E-19 127.4 11.8 117 187-310 21-139 (243)
87 2kw5_A SLR1183 protein; struct 99.6 1.8E-14 6.3E-19 123.7 11.5 103 201-310 30-133 (202)
88 3l8d_A Methyltransferase; stru 99.6 7.9E-15 2.7E-19 129.3 9.4 102 201-310 53-155 (242)
89 3pfg_A N-methyltransferase; N, 99.6 1E-14 3.4E-19 130.7 10.1 100 201-308 50-151 (263)
90 3dmg_A Probable ribosomal RNA 99.6 1.8E-14 6.2E-19 136.7 12.3 123 185-310 215-342 (381)
91 1xdz_A Methyltransferase GIDB; 99.6 1.3E-14 4.6E-19 128.6 10.6 103 200-310 69-176 (240)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.1E-14 7.2E-19 124.9 11.3 108 201-309 41-157 (214)
93 3dli_A Methyltransferase; PSI- 99.5 9.8E-15 3.4E-19 129.1 9.3 114 186-310 25-142 (240)
94 3e23_A Uncharacterized protein 99.5 1.4E-14 4.9E-19 125.3 10.1 101 200-310 42-143 (211)
95 2b3t_A Protein methyltransfera 99.5 4E-14 1.4E-18 128.2 13.4 125 183-310 92-240 (276)
96 4fsd_A Arsenic methyltransfera 99.5 1.4E-14 4.8E-19 137.5 10.8 108 199-309 81-204 (383)
97 3u81_A Catechol O-methyltransf 99.5 2.4E-14 8E-19 125.3 11.3 111 197-311 54-173 (221)
98 3gdh_A Trimethylguanosine synt 99.5 9.4E-16 3.2E-20 135.7 2.2 103 201-308 78-181 (241)
99 3uwp_A Histone-lysine N-methyl 99.5 2E-14 6.9E-19 136.2 10.8 118 187-308 159-288 (438)
100 3grz_A L11 mtase, ribosomal pr 99.5 2.3E-14 7.8E-19 123.6 10.3 100 200-308 59-159 (205)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.3E-14 4.4E-19 127.4 8.8 108 201-309 34-151 (218)
102 1jsx_A Glucose-inhibited divis 99.5 2.8E-14 9.7E-19 123.0 10.9 114 187-309 48-166 (207)
103 3ccf_A Cyclopropane-fatty-acyl 99.5 1.2E-14 4.1E-19 131.5 8.9 106 193-309 49-155 (279)
104 4dcm_A Ribosomal RNA large sub 99.5 2.4E-14 8.1E-19 135.7 11.2 120 188-308 209-334 (375)
105 3ntv_A MW1564 protein; rossman 99.5 2.9E-14 9.9E-19 125.9 11.0 118 188-311 58-179 (232)
106 3tma_A Methyltransferase; thum 99.5 3.6E-14 1.2E-18 133.2 12.2 126 185-311 187-320 (354)
107 3i9f_A Putative type 11 methyl 99.5 6.5E-15 2.2E-19 123.1 6.2 101 197-310 13-114 (170)
108 3dr5_A Putative O-methyltransf 99.5 2.8E-14 9.5E-19 125.5 10.5 122 185-312 40-167 (221)
109 2gs9_A Hypothetical protein TT 99.5 1.8E-14 6E-19 124.7 9.1 98 201-310 36-134 (211)
110 3bkx_A SAM-dependent methyltra 99.5 2.7E-14 9.2E-19 128.5 10.4 121 187-310 29-161 (275)
111 4dzr_A Protein-(glutamine-N5) 99.5 2.2E-15 7.5E-20 130.0 2.9 124 183-309 11-166 (215)
112 2fca_A TRNA (guanine-N(7)-)-me 99.5 3.2E-14 1.1E-18 124.1 10.4 108 201-309 38-154 (213)
113 3iv6_A Putative Zn-dependent a 99.5 2.7E-14 9.2E-19 128.7 10.1 116 189-309 33-149 (261)
114 3g89_A Ribosomal RNA small sub 99.5 4.3E-14 1.5E-18 126.5 10.9 103 199-309 78-185 (249)
115 1o9g_A RRNA methyltransferase; 99.5 1.9E-14 6.6E-19 128.3 8.5 123 188-310 38-216 (250)
116 1nv8_A HEMK protein; class I a 99.5 6.3E-14 2.2E-18 127.8 12.0 127 182-310 104-251 (284)
117 2igt_A SAM dependent methyltra 99.5 2.6E-14 9E-19 133.2 9.6 121 187-308 138-272 (332)
118 3bxo_A N,N-dimethyltransferase 99.5 6E-14 2.1E-18 123.2 11.1 102 200-309 39-142 (239)
119 1nt2_A Fibrillarin-like PRE-rR 99.5 8.1E-14 2.8E-18 121.5 11.4 103 197-308 53-161 (210)
120 1fbn_A MJ fibrillarin homologu 99.5 6.1E-14 2.1E-18 123.5 10.8 110 189-307 59-177 (230)
121 2b78_A Hypothetical protein SM 99.5 6.1E-14 2.1E-18 133.3 11.3 114 200-313 211-336 (385)
122 3tfw_A Putative O-methyltransf 99.5 1E-13 3.4E-18 123.8 12.0 109 198-312 60-174 (248)
123 3ajd_A Putative methyltransfer 99.5 4.3E-14 1.5E-18 128.1 9.6 116 197-313 79-216 (274)
124 2g72_A Phenylethanolamine N-me 99.5 4.8E-14 1.6E-18 128.3 9.8 108 200-307 70-214 (289)
125 1vbf_A 231AA long hypothetical 99.5 6.9E-14 2.4E-18 122.7 10.4 114 185-311 54-168 (231)
126 2avn_A Ubiquinone/menaquinone 99.5 5.9E-14 2E-18 125.7 10.0 110 190-311 45-155 (260)
127 2ipx_A RRNA 2'-O-methyltransfe 99.5 2.1E-13 7E-18 120.2 13.1 107 194-308 70-182 (233)
128 3tr6_A O-methyltransferase; ce 99.5 6.4E-14 2.2E-18 122.4 9.7 108 198-311 61-177 (225)
129 1ixk_A Methyltransferase; open 99.5 7E-14 2.4E-18 129.4 10.5 117 196-313 113-251 (315)
130 2i62_A Nicotinamide N-methyltr 99.5 5.9E-14 2E-18 125.2 9.6 111 198-308 53-198 (265)
131 2gpy_A O-methyltransferase; st 99.5 9.4E-14 3.2E-18 122.3 10.7 117 188-310 41-162 (233)
132 3duw_A OMT, O-methyltransferas 99.5 1.1E-13 3.9E-18 120.7 11.2 109 198-312 55-171 (223)
133 1dl5_A Protein-L-isoaspartate 99.5 8.9E-14 3E-18 128.6 11.0 115 187-311 61-178 (317)
134 3cgg_A SAM-dependent methyltra 99.5 1.1E-13 3.9E-18 117.1 10.7 103 200-310 45-149 (195)
135 2yxe_A Protein-L-isoaspartate 99.5 1E-13 3.5E-18 120.3 10.5 115 186-310 62-179 (215)
136 3k6r_A Putative transferase PH 99.5 8.2E-14 2.8E-18 126.5 10.0 124 174-307 98-224 (278)
137 3mb5_A SAM-dependent methyltra 99.5 9.1E-14 3.1E-18 123.9 10.1 113 189-310 81-196 (255)
138 2nxc_A L11 mtase, ribosomal pr 99.5 8.9E-14 3E-18 124.7 9.9 111 186-308 107-218 (254)
139 3lec_A NADB-rossmann superfami 99.5 1.5E-13 5.1E-18 121.3 11.0 105 200-309 20-126 (230)
140 3kr9_A SAM-dependent methyltra 99.5 1.6E-13 5.3E-18 120.8 11.1 105 200-309 14-120 (225)
141 2pjd_A Ribosomal RNA small sub 99.5 1.1E-13 3.9E-18 129.3 10.8 119 188-310 183-305 (343)
142 3a27_A TYW2, uncharacterized p 99.5 1.9E-13 6.3E-18 123.9 11.9 104 199-311 117-222 (272)
143 3htx_A HEN1; HEN1, small RNA m 99.5 1.6E-13 5.4E-18 139.1 12.5 123 186-311 706-837 (950)
144 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5.3E-18 121.8 10.3 110 200-310 45-170 (235)
145 3e8s_A Putative SAM dependent 99.5 4.5E-14 1.5E-18 122.7 6.7 111 189-311 40-155 (227)
146 3gnl_A Uncharacterized protein 99.5 2E-13 7E-18 121.3 11.0 105 200-309 20-126 (244)
147 2h00_A Methyltransferase 10 do 99.5 3.5E-14 1.2E-18 126.7 6.0 122 185-306 47-190 (254)
148 3fzg_A 16S rRNA methylase; met 99.5 8.1E-14 2.8E-18 118.9 7.8 112 186-305 36-149 (200)
149 3mq2_A 16S rRNA methyltransfer 99.5 2.4E-14 8.3E-19 124.6 4.7 111 196-308 22-140 (218)
150 2as0_A Hypothetical protein PH 99.5 1.1E-13 3.9E-18 131.8 9.6 114 201-314 217-341 (396)
151 3c0k_A UPF0064 protein YCCW; P 99.5 2.3E-13 7.8E-18 129.7 11.6 115 200-314 219-345 (396)
152 2aot_A HMT, histamine N-methyl 99.5 1.6E-13 5.5E-18 125.1 10.1 105 200-308 51-172 (292)
153 3r3h_A O-methyltransferase, SA 99.5 4.2E-14 1.4E-18 126.0 5.8 108 198-311 57-173 (242)
154 3bzb_A Uncharacterized protein 99.5 4.7E-13 1.6E-17 121.7 12.8 120 185-307 63-204 (281)
155 3ggd_A SAM-dependent methyltra 99.5 8.4E-14 2.9E-18 123.2 7.6 105 199-309 54-164 (245)
156 3c3p_A Methyltransferase; NP_9 99.4 1.7E-13 6E-18 118.7 9.1 105 200-311 55-163 (210)
157 1yb2_A Hypothetical protein TA 99.4 1.7E-13 5.6E-18 124.1 9.3 110 192-311 101-214 (275)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.6E-13 9E-18 120.7 10.4 112 191-311 86-201 (258)
159 2qe6_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 121.7 11.8 107 201-311 77-199 (274)
160 4df3_A Fibrillarin-like rRNA/T 99.4 1.6E-13 5.4E-18 121.4 8.6 113 187-307 60-181 (233)
161 3i53_A O-methyltransferase; CO 99.4 5.6E-13 1.9E-17 123.7 12.8 114 193-310 161-276 (332)
162 2r3s_A Uncharacterized protein 99.4 7.3E-13 2.5E-17 122.6 13.4 117 192-310 154-273 (335)
163 1g8a_A Fibrillarin-like PRE-rR 99.4 4.8E-13 1.7E-17 117.2 11.5 113 187-307 56-177 (227)
164 1i1n_A Protein-L-isoaspartate 99.4 3.7E-13 1.3E-17 117.7 10.7 113 190-311 64-185 (226)
165 1u2z_A Histone-lysine N-methyl 99.4 4.7E-13 1.6E-17 128.5 12.3 117 187-307 228-358 (433)
166 3cc8_A Putative methyltransfer 99.4 2.4E-13 8.1E-18 118.3 9.2 106 192-310 24-132 (230)
167 3gwz_A MMCR; methyltransferase 99.4 1.4E-12 4.7E-17 123.1 14.7 117 190-310 191-309 (369)
168 3dp7_A SAM-dependent methyltra 99.4 5.5E-13 1.9E-17 125.6 11.9 107 200-309 178-288 (363)
169 1qzz_A RDMB, aclacinomycin-10- 99.4 9.6E-13 3.3E-17 123.9 13.3 115 191-309 172-288 (374)
170 3v97_A Ribosomal RNA large sub 99.4 2.6E-13 9E-18 138.1 10.1 111 201-311 539-660 (703)
171 1jg1_A PIMT;, protein-L-isoasp 99.4 3.4E-13 1.2E-17 119.0 9.5 115 186-311 76-192 (235)
172 1i9g_A Hypothetical protein RV 99.4 3.8E-13 1.3E-17 121.4 10.1 115 189-311 87-206 (280)
173 1sui_A Caffeoyl-COA O-methyltr 99.4 2.3E-13 8E-18 121.5 8.5 107 199-311 77-193 (247)
174 2hnk_A SAM-dependent O-methylt 99.4 3E-13 1E-17 119.6 9.1 114 192-311 51-184 (239)
175 3mcz_A O-methyltransferase; ad 99.4 7E-13 2.4E-17 123.9 11.9 116 192-309 169-288 (352)
176 3m33_A Uncharacterized protein 99.4 1.2E-13 4.2E-18 121.2 6.3 90 200-305 47-139 (226)
177 2yvl_A TRMI protein, hypotheti 99.4 6.9E-13 2.4E-17 117.3 11.2 110 192-310 82-192 (248)
178 1x19_A CRTF-related protein; m 99.4 1.4E-12 4.8E-17 122.4 13.9 115 190-308 179-295 (359)
179 1o54_A SAM-dependent O-methylt 99.4 3.8E-13 1.3E-17 121.7 9.4 112 191-311 102-216 (277)
180 3c3y_A Pfomt, O-methyltransfer 99.4 6.4E-13 2.2E-17 117.8 10.2 108 199-312 68-185 (237)
181 3q87_B N6 adenine specific DNA 99.4 1.8E-13 6.1E-18 115.1 6.2 97 200-310 22-125 (170)
182 3tm4_A TRNA (guanine N2-)-meth 99.4 9.5E-13 3.3E-17 124.5 11.7 119 186-306 203-328 (373)
183 2pbf_A Protein-L-isoaspartate 99.4 5.1E-13 1.7E-17 116.9 9.1 103 198-309 77-194 (227)
184 2b25_A Hypothetical protein; s 99.4 8.8E-13 3E-17 122.7 11.1 113 190-310 94-221 (336)
185 2avd_A Catechol-O-methyltransf 99.4 5.2E-13 1.8E-17 116.9 9.0 107 198-310 66-181 (229)
186 2yx1_A Hypothetical protein MJ 99.4 1.2E-12 3.9E-17 122.2 11.8 101 200-312 194-295 (336)
187 3id6_C Fibrillarin-like rRNA/T 99.4 1.9E-12 6.5E-17 114.6 12.5 114 186-307 58-180 (232)
188 3cbg_A O-methyltransferase; cy 99.4 9.5E-13 3.3E-17 116.2 10.6 108 199-312 70-186 (232)
189 1wxx_A TT1595, hypothetical pr 99.4 5.9E-13 2E-17 126.3 9.3 112 201-314 209-331 (382)
190 1tw3_A COMT, carminomycin 4-O- 99.4 2.1E-12 7.1E-17 121.0 12.9 115 192-310 174-290 (360)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.2E-12 4E-17 116.5 10.6 108 200-308 48-173 (246)
192 1zq9_A Probable dimethyladenos 99.4 5.4E-13 1.8E-17 121.7 8.5 115 186-305 13-144 (285)
193 4dmg_A Putative uncharacterize 99.4 1.8E-12 6.1E-17 123.4 12.4 110 201-313 214-331 (393)
194 1inl_A Spermidine synthase; be 99.4 4E-13 1.4E-17 123.2 7.5 113 200-312 89-209 (296)
195 4e2x_A TCAB9; kijanose, tetron 99.4 9.3E-14 3.2E-18 132.9 3.3 116 187-310 93-210 (416)
196 2yxl_A PH0851 protein, 450AA l 99.4 1.8E-12 6E-17 125.6 12.3 120 193-313 251-394 (450)
197 1vlm_A SAM-dependent methyltra 99.4 5.7E-13 1.9E-17 116.2 7.8 93 202-310 48-141 (219)
198 2ip2_A Probable phenazine-spec 99.4 1.1E-12 3.7E-17 121.7 10.2 116 190-310 157-274 (334)
199 3p2e_A 16S rRNA methylase; met 99.4 4.3E-13 1.5E-17 118.2 7.0 106 200-306 23-137 (225)
200 3m6w_A RRNA methylase; rRNA me 99.4 8.7E-13 3E-17 127.8 9.4 115 197-313 97-234 (464)
201 2frx_A Hypothetical protein YE 99.4 1.3E-12 4.5E-17 127.3 10.3 111 201-312 117-250 (479)
202 3m4x_A NOL1/NOP2/SUN family pr 99.4 1.2E-12 4.1E-17 126.6 9.7 116 197-313 101-239 (456)
203 2qm3_A Predicted methyltransfe 99.4 2.5E-12 8.4E-17 121.6 11.4 105 200-310 171-280 (373)
204 1xj5_A Spermidine synthase 1; 99.4 1E-12 3.5E-17 122.5 8.5 114 200-313 119-240 (334)
205 3bwc_A Spermidine synthase; SA 99.4 9E-13 3.1E-17 121.3 7.5 111 200-311 94-213 (304)
206 1r18_A Protein-L-isoaspartate( 99.3 1.1E-12 3.9E-17 114.9 7.6 113 188-310 69-196 (227)
207 3adn_A Spermidine synthase; am 99.3 1.4E-12 4.7E-17 119.5 8.3 112 200-312 82-202 (294)
208 1wy7_A Hypothetical protein PH 99.3 4.2E-12 1.4E-16 109.3 10.9 101 198-306 46-147 (207)
209 1mjf_A Spermidine synthase; sp 99.3 5.9E-13 2E-17 121.2 5.7 110 200-311 74-196 (281)
210 1af7_A Chemotaxis receptor met 99.3 4E-12 1.4E-16 115.3 11.1 108 201-309 105-253 (274)
211 2pt6_A Spermidine synthase; tr 99.3 7.5E-13 2.6E-17 122.8 6.4 112 200-311 115-233 (321)
212 1sqg_A SUN protein, FMU protei 99.3 3E-12 1E-16 123.3 10.5 121 191-313 236-379 (429)
213 2b2c_A Spermidine synthase; be 99.3 1E-12 3.5E-17 121.5 6.7 113 200-312 107-226 (314)
214 2bm8_A Cephalosporin hydroxyla 99.3 8.3E-13 2.9E-17 117.1 5.4 98 200-309 80-188 (236)
215 2o07_A Spermidine synthase; st 99.3 1.4E-12 4.8E-17 120.0 7.1 113 200-312 94-213 (304)
216 1iy9_A Spermidine synthase; ro 99.3 2E-12 6.9E-17 117.3 7.8 111 201-311 75-192 (275)
217 1ej0_A FTSJ; methyltransferase 99.3 2E-12 6.9E-17 107.3 6.8 100 199-309 20-137 (180)
218 1uir_A Polyamine aminopropyltr 99.3 2.4E-12 8.2E-17 119.0 7.5 112 200-311 76-198 (314)
219 1p91_A Ribosomal RNA large sub 99.3 2.9E-12 1E-16 114.9 7.9 95 200-310 84-180 (269)
220 3lst_A CALO1 methyltransferase 99.3 3.2E-12 1.1E-16 119.5 8.1 112 192-309 175-287 (348)
221 1ne2_A Hypothetical protein TA 99.3 6.9E-12 2.4E-16 107.6 9.4 96 198-305 48-144 (200)
222 2i7c_A Spermidine synthase; tr 99.3 3.1E-12 1.1E-16 116.5 7.5 112 200-312 77-196 (283)
223 2h1r_A Dimethyladenosine trans 99.3 2.1E-12 7.3E-17 118.5 6.3 112 187-304 28-155 (299)
224 3gjy_A Spermidine synthase; AP 99.3 3.9E-12 1.3E-16 117.3 8.0 106 203-309 91-201 (317)
225 3giw_A Protein of unknown func 99.3 6.7E-12 2.3E-16 113.3 8.9 123 188-311 64-203 (277)
226 2plw_A Ribosomal RNA methyltra 99.3 6.2E-12 2.1E-16 107.6 8.3 99 199-308 20-154 (201)
227 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.4E-11 4.7E-16 118.8 11.6 116 185-309 270-390 (433)
228 2oxt_A Nucleoside-2'-O-methylt 99.3 7.4E-13 2.5E-17 119.6 2.4 113 192-309 65-186 (265)
229 3hp7_A Hemolysin, putative; st 99.3 2.1E-12 7.1E-17 117.8 5.3 103 193-307 76-184 (291)
230 3ldu_A Putative methylase; str 99.3 1.1E-11 3.7E-16 117.7 10.3 126 184-310 178-346 (385)
231 3k0b_A Predicted N6-adenine-sp 99.3 1.6E-11 5.5E-16 116.8 10.6 125 184-309 184-351 (393)
232 3dou_A Ribosomal RNA large sub 99.3 8.6E-12 2.9E-16 107.0 7.7 98 199-308 23-139 (191)
233 3sso_A Methyltransferase; macr 99.3 9.5E-12 3.2E-16 117.6 8.5 108 188-310 204-326 (419)
234 3ldg_A Putative uncharacterize 99.2 3.6E-11 1.2E-15 114.0 12.1 126 184-310 177-345 (384)
235 2nyu_A Putative ribosomal RNA 99.2 1.2E-11 4E-16 105.4 7.9 100 199-309 20-146 (196)
236 2b9e_A NOL1/NOP2/SUN domain fa 99.2 7.4E-11 2.5E-15 108.7 13.6 115 197-313 98-239 (309)
237 2jjq_A Uncharacterized RNA met 99.2 4E-11 1.4E-15 115.2 11.7 110 187-310 279-389 (425)
238 4azs_A Methyltransferase WBDD; 99.2 8.7E-12 3E-16 124.2 7.3 102 201-305 66-170 (569)
239 2f8l_A Hypothetical protein LM 99.2 2.5E-11 8.4E-16 113.4 9.2 110 199-311 128-259 (344)
240 2zfu_A Nucleomethylin, cerebra 99.2 9.5E-12 3.2E-16 107.7 5.2 88 200-310 66-153 (215)
241 3reo_A (ISO)eugenol O-methyltr 99.2 4.3E-11 1.5E-15 112.8 10.0 110 190-310 191-302 (368)
242 3opn_A Putative hemolysin; str 99.2 2.8E-12 9.5E-17 113.6 1.6 97 199-307 35-136 (232)
243 1yub_A Ermam, rRNA methyltrans 99.2 8.6E-13 2.9E-17 117.5 -2.3 117 187-310 15-147 (245)
244 1qam_A ERMC' methyltransferase 99.2 6.1E-11 2.1E-15 105.6 9.7 113 186-305 15-143 (244)
245 2wa2_A Non-structural protein 99.2 4.3E-12 1.5E-16 115.2 2.1 114 191-309 72-194 (276)
246 3bt7_A TRNA (uracil-5-)-methyl 99.2 3.7E-11 1.3E-15 113.3 8.5 113 187-311 200-329 (369)
247 2ih2_A Modification methylase 99.2 2.6E-11 8.7E-16 115.8 7.1 117 185-312 23-168 (421)
248 3p9c_A Caffeic acid O-methyltr 99.2 6.4E-11 2.2E-15 111.5 9.7 109 191-310 190-300 (364)
249 3frh_A 16S rRNA methylase; met 99.2 1.7E-10 5.6E-15 101.9 11.0 115 187-312 94-209 (253)
250 3gru_A Dimethyladenosine trans 99.2 8E-11 2.7E-15 107.7 9.4 91 186-280 35-126 (295)
251 3lcv_B Sisomicin-gentamicin re 99.2 8.8E-11 3E-15 104.7 9.2 112 187-305 120-233 (281)
252 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.2E-11 1.8E-15 112.3 8.2 107 191-309 198-307 (372)
253 4a6d_A Hydroxyindole O-methylt 99.1 2.3E-10 7.8E-15 107.3 12.3 115 191-309 169-284 (353)
254 2okc_A Type I restriction enzy 99.1 4.1E-11 1.4E-15 115.8 7.4 125 185-310 155-309 (445)
255 2p41_A Type II methyltransfera 99.1 2E-11 6.9E-16 112.3 4.9 106 197-309 78-192 (305)
256 2cmg_A Spermidine synthase; tr 99.1 1.4E-11 4.9E-16 110.9 3.6 99 201-311 72-174 (262)
257 3axs_A Probable N(2),N(2)-dime 99.1 8.6E-11 2.9E-15 111.5 7.4 103 200-309 51-159 (392)
258 2dul_A N(2),N(2)-dimethylguano 99.1 9.8E-11 3.3E-15 110.8 7.4 100 201-308 47-164 (378)
259 2qfm_A Spermine synthase; sper 99.1 9.7E-11 3.3E-15 109.4 7.1 113 201-313 188-319 (364)
260 3tqs_A Ribosomal RNA small sub 99.1 2.3E-10 7.9E-15 102.6 8.7 89 187-280 15-108 (255)
261 1fp2_A Isoflavone O-methyltran 99.1 2E-10 6.8E-15 107.4 8.5 101 198-310 185-290 (352)
262 3fut_A Dimethyladenosine trans 99.1 3.3E-10 1.1E-14 102.4 9.4 99 187-293 33-133 (271)
263 2ld4_A Anamorsin; methyltransf 99.1 6.3E-11 2.2E-15 99.4 4.3 90 197-308 8-101 (176)
264 3v97_A Ribosomal RNA large sub 99.0 1.4E-09 4.8E-14 110.7 11.0 127 184-310 173-349 (703)
265 1zg3_A Isoflavanone 4'-O-methy 99.0 6E-10 2E-14 104.4 6.6 100 199-309 191-294 (358)
266 2ar0_A M.ecoki, type I restric 98.9 1.7E-09 5.8E-14 106.9 8.3 127 184-310 152-314 (541)
267 2xyq_A Putative 2'-O-methyl tr 98.9 1.6E-09 5.4E-14 98.8 7.3 98 195-308 57-171 (290)
268 2r6z_A UPF0341 protein in RSP 98.9 2E-09 6.7E-14 96.7 6.2 82 198-280 80-173 (258)
269 3uzu_A Ribosomal RNA small sub 98.9 3.7E-09 1.3E-13 95.9 7.6 89 187-280 28-126 (279)
270 3ftd_A Dimethyladenosine trans 98.9 2.5E-09 8.6E-14 95.4 6.3 88 186-279 16-106 (249)
271 1m6y_A S-adenosyl-methyltransf 98.8 3.3E-09 1.1E-13 97.3 7.0 87 189-277 14-107 (301)
272 3cvo_A Methyltransferase-like 98.8 2.5E-08 8.5E-13 86.0 11.0 99 201-309 30-155 (202)
273 1qyr_A KSGA, high level kasuga 98.8 2.7E-09 9.2E-14 95.5 4.5 87 187-279 7-101 (252)
274 3lkd_A Type I restriction-modi 98.8 2.2E-08 7.4E-13 98.9 10.5 126 185-310 201-360 (542)
275 3khk_A Type I restriction-modi 98.8 7.6E-09 2.6E-13 102.2 6.9 126 183-309 227-396 (544)
276 3ll7_A Putative methyltransfer 98.8 7E-09 2.4E-13 98.8 6.3 78 201-280 93-175 (410)
277 2oyr_A UPF0341 protein YHIQ; a 98.7 1.1E-08 3.9E-13 91.6 5.4 86 193-280 78-176 (258)
278 4fzv_A Putative methyltransfer 98.7 4.3E-08 1.5E-12 91.8 9.2 117 197-313 144-289 (359)
279 3o4f_A Spermidine synthase; am 98.6 1.1E-07 3.7E-12 86.5 8.4 114 200-313 82-203 (294)
280 3evf_A RNA-directed RNA polyme 98.6 8.4E-08 2.9E-12 85.9 7.4 117 191-310 64-186 (277)
281 3s1s_A Restriction endonucleas 98.5 1.5E-07 5E-12 95.7 8.8 114 200-313 320-470 (878)
282 2wk1_A NOVP; transferase, O-me 98.4 9E-07 3.1E-11 80.1 10.1 106 200-310 105-246 (282)
283 3b5i_A S-adenosyl-L-methionine 98.4 1.4E-06 4.8E-11 82.0 11.4 108 202-309 53-226 (374)
284 3gcz_A Polyprotein; flavivirus 98.3 1.7E-07 5.9E-12 84.0 2.5 117 190-310 79-203 (282)
285 3c6k_A Spermine synthase; sper 98.3 7.6E-07 2.6E-11 83.5 6.6 112 201-312 205-335 (381)
286 4auk_A Ribosomal RNA large sub 98.3 2.4E-06 8.2E-11 79.8 8.9 72 199-278 209-280 (375)
287 2qy6_A UPF0209 protein YFCK; s 98.2 1.6E-06 5.6E-11 77.5 6.9 106 201-306 60-211 (257)
288 2efj_A 3,7-dimethylxanthine me 98.2 1.7E-06 5.9E-11 81.5 7.2 108 202-309 53-226 (384)
289 1wg8_A Predicted S-adenosylmet 98.2 3E-06 1E-10 76.3 7.7 82 189-276 10-97 (285)
290 3ufb_A Type I restriction-modi 98.2 6.9E-06 2.4E-10 80.9 11.0 98 181-279 197-313 (530)
291 3p8z_A Mtase, non-structural p 98.1 1.7E-05 5.8E-10 69.2 10.2 119 183-306 60-184 (267)
292 1m6e_X S-adenosyl-L-methionnin 98.0 3.7E-06 1.3E-10 78.6 5.1 109 201-309 51-210 (359)
293 2px2_A Genome polyprotein [con 98.0 5.9E-06 2E-10 73.0 5.2 115 183-306 55-181 (269)
294 3eld_A Methyltransferase; flav 98.0 1.8E-05 6.1E-10 71.4 8.3 109 199-310 79-193 (300)
295 3lkz_A Non-structural protein 97.9 2.7E-05 9.4E-10 70.0 8.7 120 185-308 78-204 (321)
296 2k4m_A TR8_protein, UPF0146 pr 97.9 1.6E-05 5.4E-10 64.5 5.5 72 187-277 23-99 (153)
297 2oo3_A Protein involved in cat 97.8 4.3E-06 1.5E-10 75.3 0.6 149 146-306 33-196 (283)
298 2zig_A TTHA0409, putative modi 97.7 0.00011 3.8E-09 66.7 8.2 58 187-246 222-280 (297)
299 4hc4_A Protein arginine N-meth 97.6 5.3E-05 1.8E-09 71.3 5.2 30 153-182 88-117 (376)
300 3r24_A NSP16, 2'-O-methyl tran 97.2 0.00062 2.1E-08 61.2 7.1 95 197-306 105-215 (344)
301 3opn_A Putative hemolysin; str 97.2 0.00065 2.2E-08 59.4 7.1 42 145-186 34-75 (232)
302 3tka_A Ribosomal RNA small sub 97.2 0.00073 2.5E-08 62.2 7.1 83 189-276 45-136 (347)
303 3thr_A Glycine N-methyltransfe 97.1 0.00021 7.2E-09 64.0 3.4 55 131-186 40-94 (293)
304 3kr9_A SAM-dependent methyltra 97.1 0.00039 1.3E-08 60.7 4.7 42 146-187 13-55 (225)
305 3hp7_A Hemolysin, putative; st 97.1 0.00087 3E-08 60.7 6.9 41 146-186 83-123 (291)
306 3gnl_A Uncharacterized protein 97.1 0.00043 1.5E-08 61.1 4.7 42 146-187 19-61 (244)
307 3lec_A NADB-rossmann superfami 97.1 0.00059 2E-08 59.7 5.4 42 146-187 19-61 (230)
308 1g60_A Adenine-specific methyl 97.1 0.0009 3.1E-08 59.4 6.8 60 187-248 199-259 (260)
309 3bzb_A Uncharacterized protein 97.0 0.0007 2.4E-08 60.8 5.9 51 133-183 64-115 (281)
310 1i4w_A Mitochondrial replicati 97.0 0.00085 2.9E-08 62.4 6.5 74 186-263 37-118 (353)
311 2wa2_A Non-structural protein 97.0 0.00055 1.9E-08 61.6 5.1 37 144-182 78-114 (276)
312 3g5l_A Putative S-adenosylmeth 97.0 0.0013 4.3E-08 57.5 6.7 44 139-182 35-78 (253)
313 3e05_A Precorrin-6Y C5,15-meth 97.0 0.02 6.9E-07 48.1 14.0 106 143-248 35-160 (204)
314 2a14_A Indolethylamine N-methy 96.9 0.00062 2.1E-08 60.3 4.2 41 145-185 52-92 (263)
315 2nxc_A L11 mtase, ribosomal pr 96.9 0.0017 5.7E-08 57.4 6.9 40 146-186 118-157 (254)
316 3p9n_A Possible methyltransfer 96.8 0.0012 4.2E-08 55.1 4.9 40 147-186 43-82 (189)
317 2p41_A Type II methyltransfera 96.8 0.00092 3.1E-08 61.0 4.4 34 144-179 78-111 (305)
318 3mti_A RRNA methylase; SAM-dep 96.8 0.0013 4.5E-08 54.5 4.9 41 145-186 19-59 (185)
319 3ftd_A Dimethyladenosine trans 96.7 0.0015 5.2E-08 57.7 5.2 44 140-183 23-66 (249)
320 2esr_A Methyltransferase; stru 96.7 0.0016 5.3E-08 53.6 4.7 40 146-185 29-68 (177)
321 3k6r_A Putative transferase PH 96.7 0.0018 6.1E-08 58.3 5.2 41 146-186 123-163 (278)
322 3njr_A Precorrin-6Y methylase; 96.6 0.0025 8.6E-08 54.2 5.8 42 144-186 51-92 (204)
323 2ift_A Putative methylase HI07 96.5 0.0019 6.3E-08 54.8 4.3 39 148-186 53-91 (201)
324 3q87_B N6 adenine specific DNA 96.5 0.002 6.9E-08 53.1 4.4 36 147-184 22-57 (170)
325 1ve3_A Hypothetical protein PH 96.5 0.0057 2E-07 52.0 7.4 50 132-184 24-73 (227)
326 1nt2_A Fibrillarin-like PRE-rR 96.5 0.0025 8.6E-08 54.6 5.1 39 145-183 54-93 (210)
327 1wy7_A Hypothetical protein PH 96.5 0.0027 9.1E-08 53.6 5.1 41 145-185 46-86 (207)
328 2fhp_A Methylase, putative; al 96.5 0.0039 1.3E-07 51.4 6.1 41 146-186 42-82 (187)
329 2yxd_A Probable cobalt-precorr 96.5 0.0039 1.3E-07 51.0 6.0 40 145-185 32-71 (183)
330 1rjd_A PPM1P, carboxy methyl t 96.5 0.012 4.2E-07 54.2 10.0 121 186-308 82-233 (334)
331 1qam_A ERMC' methyltransferase 96.5 0.0041 1.4E-07 54.6 6.4 46 138-184 20-65 (244)
332 3g07_A 7SK snRNA methylphospha 96.5 0.0024 8.1E-08 57.5 4.9 41 145-185 43-84 (292)
333 3iv6_A Putative Zn-dependent a 96.5 0.0036 1.2E-07 55.8 5.9 42 141-183 38-79 (261)
334 1pjz_A Thiopurine S-methyltran 96.5 0.0022 7.5E-08 54.5 4.3 41 145-186 19-59 (203)
335 3g89_A Ribosomal RNA small sub 96.4 0.0041 1.4E-07 54.8 6.0 41 146-186 78-119 (249)
336 2fpo_A Methylase YHHF; structu 96.4 0.0025 8.4E-08 54.1 4.3 39 148-186 54-92 (202)
337 3hm2_A Precorrin-6Y C5,15-meth 96.4 0.0043 1.5E-07 50.7 5.5 42 144-185 21-63 (178)
338 4dzr_A Protein-(glutamine-N5) 96.4 0.0044 1.5E-07 52.1 5.7 40 147-186 29-69 (215)
339 3tqs_A Ribosomal RNA small sub 96.4 0.0037 1.3E-07 55.5 5.3 42 143-185 24-65 (255)
340 3g7u_A Cytosine-specific methy 96.4 0.0089 3.1E-07 56.0 8.2 72 203-280 3-83 (376)
341 1ne2_A Hypothetical protein TA 96.3 0.0035 1.2E-07 52.7 4.8 41 145-185 48-88 (200)
342 3f4k_A Putative methyltransfer 96.3 0.0046 1.6E-07 53.9 5.7 43 143-185 41-83 (257)
343 3uwp_A Histone-lysine N-methyl 96.3 0.014 4.9E-07 55.3 9.3 45 142-186 167-212 (438)
344 2frn_A Hypothetical protein PH 96.3 0.0026 8.9E-08 56.9 4.0 41 146-186 123-163 (278)
345 4df3_A Fibrillarin-like rRNA/T 96.3 0.0042 1.5E-07 54.3 5.3 41 142-182 71-113 (233)
346 1wzn_A SAM-dependent methyltra 96.3 0.012 4.2E-07 51.0 8.2 44 142-186 35-78 (252)
347 2uyo_A Hypothetical protein ML 96.3 0.05 1.7E-06 49.5 12.5 107 203-311 104-221 (310)
348 1ws6_A Methyltransferase; stru 96.3 0.0036 1.2E-07 50.7 4.4 38 148-186 41-78 (171)
349 2nyu_A Putative ribosomal RNA 96.2 0.0074 2.5E-07 50.2 6.4 37 146-182 20-66 (196)
350 3grz_A L11 mtase, ribosomal pr 96.2 0.0045 1.5E-07 52.2 5.0 39 147-185 59-97 (205)
351 1l3i_A Precorrin-6Y methyltran 96.2 0.0062 2.1E-07 50.0 5.8 41 144-185 29-69 (192)
352 3gru_A Dimethyladenosine trans 96.2 0.0061 2.1E-07 55.2 6.1 48 138-186 40-87 (295)
353 3dou_A Ribosomal RNA large sub 96.2 0.0072 2.5E-07 50.9 6.2 36 146-182 23-58 (191)
354 3fut_A Dimethyladenosine trans 96.2 0.0044 1.5E-07 55.5 5.0 41 144-186 43-83 (271)
355 1fbn_A MJ fibrillarin homologu 96.2 0.0066 2.2E-07 52.4 5.9 40 143-182 69-109 (230)
356 3lpm_A Putative methyltransfer 96.2 0.005 1.7E-07 54.2 5.2 42 145-186 45-87 (259)
357 1xdz_A Methyltransferase GIDB; 96.2 0.0037 1.3E-07 54.3 4.2 39 147-185 69-108 (240)
358 3kkz_A Uncharacterized protein 96.1 0.0069 2.4E-07 53.3 5.9 41 145-185 43-83 (267)
359 1nkv_A Hypothetical protein YJ 96.1 0.0084 2.9E-07 52.1 6.4 46 141-186 29-74 (256)
360 3ofk_A Nodulation protein S; N 96.1 0.0098 3.4E-07 50.3 6.7 46 136-182 39-84 (216)
361 3bus_A REBM, methyltransferase 96.1 0.0087 3E-07 52.6 6.5 49 137-185 50-98 (273)
362 2b78_A Hypothetical protein SM 96.1 0.0059 2E-07 57.3 5.7 41 147-187 211-251 (385)
363 1u2z_A Histone-lysine N-methyl 96.1 0.0077 2.6E-07 57.5 6.4 47 140-186 234-281 (433)
364 4azs_A Methyltransferase WBDD; 96.1 0.0024 8.4E-08 63.1 3.0 79 148-234 66-145 (569)
365 3jwh_A HEN1; methyltransferase 96.1 0.0054 1.9E-07 52.1 4.8 37 147-183 28-65 (217)
366 1yub_A Ermam, rRNA methyltrans 96.1 0.0046 1.6E-07 54.1 4.4 41 144-185 25-65 (245)
367 2gb4_A Thiopurine S-methyltran 96.1 0.0058 2E-07 54.0 5.1 39 147-186 67-105 (252)
368 2plw_A Ribosomal RNA methyltra 96.1 0.0087 3E-07 50.0 6.0 37 146-182 20-59 (201)
369 2pxx_A Uncharacterized protein 96.1 0.0069 2.3E-07 50.9 5.4 38 147-184 41-78 (215)
370 3mq2_A 16S rRNA methyltransfer 96.0 0.005 1.7E-07 52.4 4.3 40 146-185 25-65 (218)
371 3fzg_A 16S rRNA methylase; met 96.0 0.0053 1.8E-07 52.2 4.3 39 147-185 48-87 (200)
372 3hem_A Cyclopropane-fatty-acyl 96.0 0.011 3.9E-07 52.9 6.9 46 138-184 62-108 (302)
373 3uzu_A Ribosomal RNA small sub 96.0 0.005 1.7E-07 55.3 4.4 43 144-186 38-83 (279)
374 2zig_A TTHA0409, putative modi 96.0 0.0054 1.8E-07 55.5 4.6 62 250-311 20-100 (297)
375 1ej0_A FTSJ; methyltransferase 96.0 0.015 5.2E-07 46.8 6.9 37 145-181 19-57 (180)
376 1g55_A DNA cytosine methyltran 96.0 0.0032 1.1E-07 58.3 3.1 72 203-280 3-80 (343)
377 1xtp_A LMAJ004091AAA; SGPP, st 96.0 0.012 4.2E-07 50.9 6.7 43 140-182 85-127 (254)
378 3e8s_A Putative SAM dependent 96.0 0.0078 2.7E-07 51.0 5.3 35 147-182 51-85 (227)
379 3orh_A Guanidinoacetate N-meth 96.0 0.0045 1.5E-07 53.9 3.8 36 147-182 59-94 (236)
380 3lbf_A Protein-L-isoaspartate 96.0 0.012 4.1E-07 49.6 6.3 41 142-183 71-111 (210)
381 3bkw_A MLL3908 protein, S-aden 96.0 0.01 3.6E-07 50.9 6.0 38 144-181 39-76 (243)
382 1zx0_A Guanidinoacetate N-meth 95.9 0.0055 1.9E-07 53.0 4.2 37 147-183 59-95 (236)
383 3eey_A Putative rRNA methylase 95.9 0.0065 2.2E-07 50.7 4.6 41 146-186 20-62 (197)
384 1vbf_A 231AA long hypothetical 95.9 0.012 3.9E-07 50.5 6.3 40 142-182 64-103 (231)
385 3jwg_A HEN1, methyltransferase 95.9 0.007 2.4E-07 51.4 4.8 38 147-184 28-66 (219)
386 1dus_A MJ0882; hypothetical pr 95.9 0.013 4.5E-07 48.1 6.3 42 144-186 48-89 (194)
387 4gek_A TRNA (CMO5U34)-methyltr 95.9 0.012 4.2E-07 52.1 6.5 40 146-185 68-110 (261)
388 1kpg_A CFA synthase;, cyclopro 95.9 0.015 5E-07 51.7 6.9 47 137-184 53-100 (287)
389 3dtn_A Putative methyltransfer 95.9 0.015 5E-07 49.9 6.7 38 145-182 41-79 (234)
390 3p2e_A 16S rRNA methylase; met 95.9 0.0072 2.5E-07 52.3 4.6 38 147-184 23-61 (225)
391 3gdh_A Trimethylguanosine synt 95.9 0.0067 2.3E-07 52.4 4.5 37 147-184 77-113 (241)
392 3frh_A 16S rRNA methylase; met 95.9 0.011 3.7E-07 52.0 5.7 38 147-186 104-141 (253)
393 3ggd_A SAM-dependent methyltra 95.9 0.0088 3E-07 51.8 5.2 37 145-182 53-89 (245)
394 3evz_A Methyltransferase; NYSG 95.9 0.0083 2.8E-07 51.4 4.9 41 146-186 53-94 (230)
395 2i62_A Nicotinamide N-methyltr 95.8 0.0072 2.5E-07 52.7 4.5 39 145-183 53-91 (265)
396 2vdv_E TRNA (guanine-N(7)-)-me 95.8 0.0077 2.6E-07 52.5 4.7 40 146-185 47-87 (246)
397 1zq9_A Probable dimethyladenos 95.8 0.013 4.3E-07 52.7 6.1 44 140-184 20-63 (285)
398 2c7p_A Modification methylase 95.8 0.014 4.6E-07 53.7 6.4 72 202-281 11-84 (327)
399 4dcm_A Ribosomal RNA large sub 95.8 0.01 3.5E-07 55.6 5.6 48 139-186 213-261 (375)
400 3mgg_A Methyltransferase; NYSG 95.8 0.011 3.7E-07 52.1 5.5 51 135-185 24-75 (276)
401 4dmg_A Putative uncharacterize 95.7 0.0079 2.7E-07 56.7 4.6 38 148-186 214-251 (393)
402 2vdw_A Vaccinia virus capping 95.7 0.011 3.7E-07 53.7 5.3 39 148-186 48-86 (302)
403 3bkx_A SAM-dependent methyltra 95.7 0.017 5.9E-07 50.7 6.5 40 143-182 38-79 (275)
404 3ege_A Putative methyltransfer 95.7 0.014 4.6E-07 51.3 5.8 39 142-181 28-66 (261)
405 2py6_A Methyltransferase FKBM; 95.7 0.02 7E-07 54.1 7.3 63 198-260 223-292 (409)
406 3ujc_A Phosphoethanolamine N-m 95.7 0.015 5E-07 50.6 5.8 44 139-182 46-89 (266)
407 2yxe_A Protein-L-isoaspartate 95.6 0.015 5.1E-07 49.2 5.7 43 143-185 72-116 (215)
408 2oxt_A Nucleoside-2'-O-methylt 95.6 0.012 4E-07 52.5 5.2 37 144-182 70-106 (265)
409 1qyr_A KSGA, high level kasuga 95.6 0.011 3.7E-07 52.3 4.9 36 144-182 17-54 (252)
410 3id6_C Fibrillarin-like rRNA/T 95.6 0.013 4.4E-07 51.2 5.2 40 144-183 72-113 (232)
411 1jsx_A Glucose-inhibited divis 95.6 0.0041 1.4E-07 52.3 2.0 38 148-185 65-103 (207)
412 3l8d_A Methyltransferase; stru 95.6 0.0095 3.2E-07 51.2 4.3 35 147-182 52-86 (242)
413 1f8f_A Benzyl alcohol dehydrog 95.6 0.014 4.9E-07 54.1 5.8 98 193-306 182-287 (371)
414 2ipx_A RRNA 2'-O-methyltransfe 95.6 0.013 4.5E-07 50.4 5.1 40 143-182 72-113 (233)
415 3ou2_A SAM-dependent methyltra 95.6 0.019 6.4E-07 48.4 6.0 37 145-182 43-79 (218)
416 2xvm_A Tellurite resistance pr 95.5 0.017 5.9E-07 47.8 5.5 40 145-185 29-68 (199)
417 2p7i_A Hypothetical protein; p 95.5 0.012 4.1E-07 50.5 4.7 36 146-182 40-75 (250)
418 2h1r_A Dimethyladenosine trans 95.5 0.014 4.8E-07 52.8 5.3 42 144-186 38-79 (299)
419 2fyt_A Protein arginine N-meth 95.5 0.01 3.4E-07 54.8 4.4 29 153-181 69-97 (340)
420 1g6q_1 HnRNP arginine N-methyl 95.5 0.01 3.4E-07 54.4 4.3 30 152-181 42-71 (328)
421 2fk8_A Methoxy mycolic acid sy 95.5 0.025 8.5E-07 51.0 6.9 47 137-184 79-126 (318)
422 2fca_A TRNA (guanine-N(7)-)-me 95.5 0.013 4.6E-07 49.9 4.8 39 148-186 38-77 (213)
423 3a27_A TYW2, uncharacterized p 95.5 0.011 3.8E-07 52.6 4.4 41 146-186 117-158 (272)
424 1yzh_A TRNA (guanine-N(7)-)-me 95.5 0.014 4.9E-07 49.5 4.9 39 148-186 41-80 (214)
425 2igt_A SAM dependent methyltra 95.5 0.012 4.1E-07 54.1 4.7 39 147-186 152-190 (332)
426 3m33_A Uncharacterized protein 95.5 0.014 4.6E-07 50.1 4.8 37 147-184 47-83 (226)
427 2ozv_A Hypothetical protein AT 95.4 0.016 5.4E-07 51.2 5.3 40 145-184 33-73 (260)
428 3tos_A CALS11; methyltransfera 95.4 0.018 6E-07 51.1 5.5 103 203-310 71-219 (257)
429 1ri5_A MRNA capping enzyme; me 95.4 0.015 5.1E-07 51.6 5.2 40 146-185 62-101 (298)
430 3c0k_A UPF0064 protein YCCW; P 95.4 0.012 4E-07 55.4 4.6 40 147-186 219-258 (396)
431 4e2x_A TCAB9; kijanose, tetron 95.4 0.029 9.9E-07 52.8 7.4 46 135-181 94-139 (416)
432 4gqb_A Protein arginine N-meth 95.4 0.01 3.4E-07 59.3 4.2 66 122-187 323-401 (637)
433 1g8a_A Fibrillarin-like PRE-rR 95.4 0.02 6.9E-07 48.9 5.7 39 144-182 69-109 (227)
434 3dlc_A Putative S-adenosyl-L-m 95.4 0.019 6.5E-07 48.2 5.5 38 146-184 42-79 (219)
435 3mb5_A SAM-dependent methyltra 95.4 0.024 8.3E-07 49.3 6.3 47 140-186 85-133 (255)
436 3d2l_A SAM-dependent methyltra 95.4 0.021 7.1E-07 49.0 5.8 38 147-186 32-69 (243)
437 3tm4_A TRNA (guanine N2-)-meth 95.4 0.011 3.9E-07 55.1 4.4 41 146-186 215-256 (373)
438 3e23_A Uncharacterized protein 95.4 0.016 5.5E-07 48.8 5.0 37 146-183 41-77 (211)
439 3r0q_C Probable protein argini 95.4 0.011 3.7E-07 55.3 4.2 28 153-180 68-95 (376)
440 2g72_A Phenylethanolamine N-me 95.4 0.0075 2.6E-07 53.8 3.0 38 147-184 70-107 (289)
441 3q7e_A Protein arginine N-meth 95.4 0.011 3.8E-07 54.6 4.3 29 153-181 71-99 (349)
442 2vz8_A Fatty acid synthase; tr 95.4 0.0039 1.3E-07 71.5 1.3 101 201-308 1240-1348(2512)
443 3i9f_A Putative type 11 methyl 95.4 0.01 3.4E-07 48.2 3.4 36 146-182 15-50 (170)
444 1vl5_A Unknown conserved prote 95.4 0.018 6.3E-07 50.2 5.4 40 145-185 34-73 (260)
445 1jg1_A PIMT;, protein-L-isoasp 95.3 0.014 4.9E-07 50.3 4.6 39 145-183 88-126 (235)
446 2bm8_A Cephalosporin hydroxyla 95.3 0.018 6E-07 50.1 5.1 39 148-186 81-124 (236)
447 1o9g_A RRNA methyltransferase; 95.3 0.015 5.3E-07 50.6 4.8 40 147-186 50-92 (250)
448 1xxl_A YCGJ protein; structura 95.3 0.016 5.6E-07 50.0 4.9 41 144-185 17-57 (239)
449 2y1w_A Histone-arginine methyl 95.3 0.013 4.4E-07 54.2 4.4 29 153-181 55-83 (348)
450 2b25_A Hypothetical protein; s 95.3 0.018 6.1E-07 52.7 5.3 42 145-186 102-145 (336)
451 2ex4_A Adrenal gland protein A 95.3 0.03 1E-06 48.3 6.5 36 148-183 79-114 (241)
452 3m70_A Tellurite resistance pr 95.3 0.016 5.4E-07 51.5 4.7 38 147-185 119-156 (286)
453 3vc1_A Geranyl diphosphate 2-C 95.2 0.026 9E-07 50.9 6.2 46 140-185 108-154 (312)
454 3dxy_A TRNA (guanine-N(7)-)-me 95.2 0.017 5.8E-07 49.7 4.6 39 148-186 34-73 (218)
455 3tma_A Methyltransferase; thum 95.2 0.014 4.8E-07 53.9 4.4 50 137-186 192-243 (354)
456 2avn_A Ubiquinone/menaquinone 95.2 0.036 1.2E-06 48.5 6.8 36 148-184 54-89 (260)
457 3dli_A Methyltransferase; PSI- 95.2 0.022 7.6E-07 49.1 5.3 36 146-182 39-74 (240)
458 4hg2_A Methyltransferase type 95.2 0.016 5.4E-07 51.3 4.4 34 148-182 39-72 (257)
459 3sm3_A SAM-dependent methyltra 95.2 0.02 6.9E-07 48.7 5.0 35 147-182 29-63 (235)
460 2ih2_A Modification methylase 95.2 0.032 1.1E-06 52.4 6.7 39 147-185 38-78 (421)
461 1nv8_A HEMK protein; class I a 95.1 0.014 4.9E-07 52.3 4.0 39 148-186 123-161 (284)
462 3dh0_A SAM dependent methyltra 95.1 0.015 5.1E-07 49.2 3.9 42 145-186 34-77 (219)
463 3fpf_A Mtnas, putative unchara 95.1 0.015 5.2E-07 52.7 4.1 150 8-186 11-161 (298)
464 3vyw_A MNMC2; tRNA wobble urid 95.1 0.045 1.5E-06 49.7 7.1 103 203-305 98-223 (308)
465 2yqz_A Hypothetical protein TT 95.1 0.051 1.7E-06 47.1 7.4 39 144-183 35-73 (263)
466 2yvl_A TRMI protein, hypotheti 95.1 0.025 8.7E-07 48.7 5.3 43 143-186 86-128 (248)
467 2as0_A Hypothetical protein PH 95.1 0.017 5.8E-07 54.3 4.4 39 148-186 217-255 (396)
468 1y8c_A S-adenosylmethionine-de 95.1 0.018 6E-07 49.4 4.3 38 147-185 36-73 (246)
469 3ubt_Y Modification methylase 95.0 0.07 2.4E-06 48.5 8.4 72 204-281 2-74 (331)
470 3lcv_B Sisomicin-gentamicin re 95.0 0.016 5.5E-07 51.6 3.8 39 147-185 131-170 (281)
471 1dl5_A Protein-L-isoaspartate 95.0 0.029 9.9E-07 50.9 5.7 43 142-184 69-113 (317)
472 3ldu_A Putative methylase; str 95.0 0.023 7.9E-07 53.3 5.1 36 136-171 183-218 (385)
473 3ckk_A TRNA (guanine-N(7)-)-me 95.0 0.021 7.3E-07 49.7 4.5 40 147-186 45-85 (235)
474 2pwy_A TRNA (adenine-N(1)-)-me 94.9 0.031 1.1E-06 48.5 5.6 45 142-186 90-136 (258)
475 2b3t_A Protein methyltransfera 94.9 0.042 1.5E-06 48.6 6.5 40 147-186 108-148 (276)
476 1o54_A SAM-dependent O-methylt 94.9 0.029 1E-06 49.6 5.4 46 141-186 105-152 (277)
477 2pbf_A Protein-L-isoaspartate 94.9 0.028 9.5E-07 48.0 5.1 41 145-185 77-123 (227)
478 3gu3_A Methyltransferase; alph 94.9 0.046 1.6E-06 48.5 6.7 42 144-185 18-61 (284)
479 3g5t_A Trans-aconitate 3-methy 94.9 0.024 8.4E-07 50.7 4.9 40 147-186 35-76 (299)
480 2h00_A Methyltransferase 10 do 94.8 0.015 5.2E-07 50.7 3.3 39 148-186 65-104 (254)
481 3qv2_A 5-cytosine DNA methyltr 94.8 0.031 1.1E-06 51.3 5.5 72 203-281 11-89 (327)
482 2p8j_A S-adenosylmethionine-de 94.8 0.024 8.1E-07 47.5 4.3 41 146-186 21-61 (209)
483 1uwv_A 23S rRNA (uracil-5-)-me 94.8 0.028 9.5E-07 53.6 5.2 41 145-186 283-323 (433)
484 2yx1_A Hypothetical protein MJ 94.8 0.02 6.8E-07 52.6 4.0 38 147-186 194-231 (336)
485 1boo_A Protein (N-4 cytosine-s 94.8 0.021 7E-07 52.3 4.1 64 249-312 12-88 (323)
486 2r6z_A UPF0341 protein in RSP 94.8 0.02 6.9E-07 50.7 3.9 36 145-181 80-115 (258)
487 3h2b_A SAM-dependent methyltra 94.7 0.022 7.7E-07 47.5 4.0 33 149-182 42-74 (203)
488 3bxo_A N,N-dimethyltransferase 94.7 0.045 1.5E-06 46.7 6.0 36 147-183 39-74 (239)
489 3dmg_A Probable ribosomal RNA 94.7 0.028 9.5E-07 52.7 4.8 40 146-186 231-270 (381)
490 3ccf_A Cyclopropane-fatty-acyl 94.7 0.033 1.1E-06 49.2 5.1 38 145-183 54-91 (279)
491 3hnr_A Probable methyltransfer 94.6 0.032 1.1E-06 47.2 4.7 34 148-182 45-78 (220)
492 2gs9_A Hypothetical protein TT 94.6 0.079 2.7E-06 44.4 7.1 33 148-183 36-68 (211)
493 2p35_A Trans-aconitate 2-methy 94.6 0.035 1.2E-06 48.1 4.9 43 142-184 27-70 (259)
494 2o57_A Putative sarcosine dime 94.6 0.039 1.3E-06 49.1 5.3 41 145-185 79-119 (297)
495 1yb2_A Hypothetical protein TA 94.5 0.038 1.3E-06 48.9 5.1 47 139-185 101-149 (275)
496 3pfg_A N-methyltransferase; N, 94.5 0.031 1.1E-06 48.8 4.5 34 148-182 50-83 (263)
497 2kw5_A SLR1183 protein; struct 94.5 0.034 1.2E-06 46.3 4.5 36 147-184 29-64 (202)
498 1i9g_A Hypothetical protein RV 94.5 0.06 2.1E-06 47.4 6.3 46 141-186 92-139 (280)
499 3ntv_A MW1564 protein; rossman 94.5 0.037 1.3E-06 47.7 4.8 38 147-184 70-108 (232)
500 2b9e_A NOL1/NOP2/SUN domain fa 94.4 0.027 9.2E-07 51.3 4.0 42 145-186 99-142 (309)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=253.93 Aligned_cols=159 Identities=45% Similarity=0.748 Sum_probs=141.1
Q ss_pred CCCcchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 106 TRRHDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 106 ~~~~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.++.|++||++|+++++|+.|++|.+|+..|.++|..|...++|
T Consensus 41 ~~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~------------------------------------ 84 (376)
T 4hc4_A 41 KRERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRG------------------------------------ 84 (376)
T ss_dssp --------CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTT------------------------------------
T ss_pred cccchhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCC------------------------------------
Confidence 45788999999999999999999999999999999888777777
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
++|||||||+|.+++++++.|+++|+|||.|++++.|+++++.|++.++|++++++++++.+|
T Consensus 85 -----------------k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp 147 (376)
T 4hc4_A 85 -----------------KTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP 147 (376)
T ss_dssp -----------------CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred -----------------CEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC
Confidence 678888888888888888888889999999998899999999999999999999999999888
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeecccc
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAYA 318 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~~ 318 (319)
++||+|+|+++++++.++.++..++.+..++|||||.++|+.+++|++|+..
T Consensus 148 -e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~ 199 (376)
T 4hc4_A 148 -EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISD 199 (376)
T ss_dssp -SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred -ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEecc
Confidence 7899999999999999999999999999999999999999999999999874
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.90 E-value=7.8e-24 Score=199.15 Aligned_cols=158 Identities=47% Similarity=0.848 Sum_probs=133.8
Q ss_pred CcchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHH
Q psy8709 108 RHDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 108 ~~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~ 187 (319)
....+||++|+++.+|+.|+++..|+..|..++..+..+.++
T Consensus 26 ~~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~-------------------------------------- 67 (349)
T 3q7e_A 26 TSKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKD-------------------------------------- 67 (349)
T ss_dssp -----------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTT--------------------------------------
T ss_pred chHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCC--------------------------------------
Confidence 356789999999999999999999999999988665443333
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
.+|||+|||+|.++..+++.|..+|+|+|+|++++.|+++++.+++.++++++.+|+++++++.+
T Consensus 68 ---------------~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (349)
T 3q7e_A 68 ---------------KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVE 132 (349)
T ss_dssp ---------------CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSS
T ss_pred ---------------CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCC
Confidence 78999999999999999999888999999999999999999999998889999999999988888
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeecccc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAYA 318 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~~ 318 (319)
+||+|+++++++++.++..+..++.++.++|||||+++|+..++++.++..
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~ 183 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIED 183 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEEEeeecC
Confidence 999999999988888888999999999999999999999999999988753
No 3
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.90 E-value=7.4e-24 Score=197.64 Aligned_cols=153 Identities=48% Similarity=0.859 Sum_probs=137.6
Q ss_pred hhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHHHHHH
Q psy8709 112 YYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTESYKS 191 (319)
Q Consensus 112 ~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~~~~~ 191 (319)
+||++|+++++|..|+++..|+..|..++..+....+
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~------------------------------------------- 38 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFK------------------------------------------- 38 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHT-------------------------------------------
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcC-------------------------------------------
Confidence 6999999999999999999999999998765543333
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeE
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDI 271 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~ 271 (319)
+.+|||+|||+|.++..+++.|..+|+|+|++++++.|+++++.+++.++++++.+|+.+++++.++||+
T Consensus 39 ----------~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 39 ----------DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp ----------TCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEE
T ss_pred ----------CCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccE
Confidence 3789999999999999999988789999999998899999999999988999999999998887789999
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeeccc
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAY 317 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~ 317 (319)
|+++++++++.++..+..++.++.++|||||.++|+.+++++.++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~ 154 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLE 154 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEec
Confidence 9999998888888889999999999999999999999999888764
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.90 E-value=2.2e-23 Score=195.36 Aligned_cols=158 Identities=52% Similarity=0.880 Sum_probs=136.8
Q ss_pred CCcchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 107 RRHDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 107 ~~~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.+.+..||++|..+.+|..|+++..|+..|.+++..+....++
T Consensus 23 ~~~d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~------------------------------------- 65 (340)
T 2fyt_A 23 EDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKD------------------------------------- 65 (340)
T ss_dssp -------CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTT-------------------------------------
T ss_pred ccchhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCC-------------------------------------
Confidence 4566779999999999999999999999999988766554444
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPV 266 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~ 266 (319)
.+|||+|||+|.++..+++.|..+|+|+|+|++++.|+++++.+++.++++++.+|+.+++++.
T Consensus 66 ----------------~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 66 ----------------KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp ----------------CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC
T ss_pred ----------------CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC
Confidence 7899999999999999999877799999999988999999999998889999999999988887
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeeccc
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAY 317 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~ 317 (319)
++||+|+++++.+.+.++..+..++.++.++|||||.++|+.+++++.++.
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~ 180 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVS 180 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEec
Confidence 899999999988888888889999999999999999999999999888764
No 5
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.89 E-value=9.9e-23 Score=193.47 Aligned_cols=157 Identities=44% Similarity=0.740 Sum_probs=139.9
Q ss_pred CcchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHH
Q psy8709 108 RHDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 108 ~~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~ 187 (319)
....+||++|.++..|+.|+.+..|+..|..++..+...+++
T Consensus 23 ~~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~-------------------------------------- 64 (376)
T 3r0q_C 23 VDYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEG-------------------------------------- 64 (376)
T ss_dssp -----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTT--------------------------------------
T ss_pred ccHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCC--------------------------------------
Confidence 456789999999999999999999999999988777665555
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
.+|||+|||+|.++..+++.|..+|+|+|+|++++.|+++++.+++.++++++++|+++++++ +
T Consensus 65 ---------------~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 128 (376)
T 3r0q_C 65 ---------------KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-E 128 (376)
T ss_dssp ---------------CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-S
T ss_pred ---------------CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-C
Confidence 789999999999999999988889999999998899999999999988899999999998877 8
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeecccc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAYA 318 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~~ 318 (319)
+||+|+++++++++.++..+..++.++.++|||||+++++..+++..|+..
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 179 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKS 179 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECC
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecc
Confidence 999999999999988888899999999999999999999999999988754
No 6
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.86 E-value=1.3e-21 Score=183.84 Aligned_cols=154 Identities=40% Similarity=0.592 Sum_probs=133.1
Q ss_pred cchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHHH
Q psy8709 109 HDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTES 188 (319)
Q Consensus 109 ~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~~ 188 (319)
..+.||++|.++..|+.|+++..|+..|..++..+....++
T Consensus 11 ~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~--------------------------------------- 51 (348)
T 2y1w_A 11 SAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKD--------------------------------------- 51 (348)
T ss_dssp HHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTT---------------------------------------
T ss_pred cHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCc---------------------------------------
Confidence 35679999999999999999999999999987666554444
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
.+|||+|||+|.++..+++.|..+|+|+|+|++++.|+++++.+++.++++++.+|+++++++ ++
T Consensus 52 --------------~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~ 116 (348)
T 2y1w_A 52 --------------KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQ 116 (348)
T ss_dssp --------------CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred --------------CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-Cc
Confidence 789999999999999999988789999999997789999999999888999999999988766 68
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeeccc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAY 317 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~ 317 (319)
||+|+++++++++..+. ....+..+.++|||||.++++.++++..|+.
T Consensus 117 ~D~Ivs~~~~~~~~~~~-~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~ 164 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNER-MLESYLHAKKYLKPSGNMFPTIGDVHLAPFT 164 (348)
T ss_dssp EEEEEECCCBTTBTTTS-HHHHHHHGGGGEEEEEEEESCEEEEEEEEEC
T ss_pred eeEEEEeCchhcCChHH-HHHHHHHHHhhcCCCeEEEEecCcEEEEEec
Confidence 99999999877765543 4556678899999999999999999887764
No 7
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.79 E-value=1.5e-19 Score=180.27 Aligned_cols=115 Identities=30% Similarity=0.404 Sum_probs=103.1
Q ss_pred CcceeeccCCCchHHHHHHHcC---CC--EEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAG---AA--KVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g---~~--~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
...|||+|||+|.++.++++++ .. +|++||.|++...+++..+.|++.++|+++++|++++.+| +++|+|||++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEw 436 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSEL 436 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEc
Confidence 3579999999999966665543 33 7899999998889999999999999999999999999988 7999999999
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeecccc
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAYA 318 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~~ 318 (319)
|++++.+|.++ +++....|+|||||+++|+.+++|++|+++
T Consensus 437 MG~fLl~E~ml-evL~Ardr~LKPgGimiPs~atlyiapi~~ 477 (637)
T 4gqb_A 437 LGSFADNELSP-ECLDGAQHFLKDDGVSIPGEYTSFLAPISS 477 (637)
T ss_dssp CBTTBGGGCHH-HHHHHHGGGEEEEEEEESCEEEEEEEEEEC
T ss_pred CcccccccCCH-HHHHHHHHhcCCCcEEccccceEEEEEecC
Confidence 99999999887 689999999999999999999999999875
No 8
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.78 E-value=9.1e-19 Score=171.03 Aligned_cols=154 Identities=41% Similarity=0.595 Sum_probs=129.1
Q ss_pred cchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHHH
Q psy8709 109 HDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTES 188 (319)
Q Consensus 109 ~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~~ 188 (319)
..+.|++.|+....+..|+.+..++..|...+..+....
T Consensus 119 ~~~~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~----------------------------------------- 157 (480)
T 3b3j_A 119 SAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDF----------------------------------------- 157 (480)
T ss_dssp -CCEEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGT-----------------------------------------
T ss_pred chhhHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhc-----------------------------------------
Confidence 344688888888888899999999999888775544332
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
++.+|||+|||+|.++..+++.+..+|+|+|+|++++.|+++++.+++.++++++.+|+.+++++ ++
T Consensus 158 ------------~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~ 224 (480)
T 3b3j_A 158 ------------KDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQ 224 (480)
T ss_dssp ------------TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred ------------CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CC
Confidence 33789999999999999999987789999999998899999999999988999999999987766 68
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeeccc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAY 317 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~ 317 (319)
||+|+++++++++..+.. ...+..+.++|||||.++++..+++..|+.
T Consensus 225 fD~Ivs~~~~~~~~~e~~-~~~l~~~~~~LkpgG~li~~~~~~~~~pi~ 272 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERM-LESYLHAKKYLKPSGNMFPTIGDVHLAPFT 272 (480)
T ss_dssp EEEEECCCCHHHHTCHHH-HHHHHHGGGGEEEEEEEESCEEEEEEEEEC
T ss_pred eEEEEEeCchHhcCcHHH-HHHHHHHHHhcCCCCEEEEEeceeeeeccC
Confidence 999999999887766554 445668899999999999999999888764
No 9
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.74 E-value=4.6e-18 Score=145.35 Aligned_cols=140 Identities=21% Similarity=0.224 Sum_probs=111.0
Q ss_pred hcCCceEEeeecCCCcccHHHHHHHHhccccc---CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHH
Q psy8709 168 QAGAAKVFAIEKSGTPIRTESYKSAILNNKSL---FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDII 243 (319)
Q Consensus 168 ~~ga~~V~avd~d~~~~~~~~~~~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~ 243 (319)
++..+.+.... ...++.++.+.+.+.+.+.. .++.+|||+|||+|.++..++..+..+|+|+|+|+ +++.|++++
T Consensus 9 ~~~g~~l~~~~-~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~ 87 (189)
T 3p9n_A 9 VAGGRRIAVPP-RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNI 87 (189)
T ss_dssp TTTTCEEECCS-CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHH
T ss_pred ccCCcEecCCC-CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHH
Confidence 34445554444 55667777777777776654 57789999999999999988888878999999999 999999999
Q ss_pred HhcCCCCcEEEEEcCccccc--cCCCceeEEEeccchhhhcchhhHHHHHHHHhc--ccCCCcEEEeecCcc
Q psy8709 244 RKNKYDSQIEVYHKLLEDVE--LPVESVDIIISEWMGYFLLFETMIDSVIDARNR--FLKPDGVVCPNRFTL 311 (319)
Q Consensus 244 ~~~g~~~~i~~i~~d~~~~~--~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r--~LkpgG~li~~~~t~ 311 (319)
..+++ ++++++++|+.+.. ++.++||+|++++++++. ......++..+.+ +|+|||++++++...
T Consensus 88 ~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 88 EALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVD--SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HHcCC-CceEEEEccHHHHHhhccCCCccEEEECCCCCcc--hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 99988 78999999998764 335799999999885532 3567888999988 999999999887543
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=5.1e-17 Score=146.18 Aligned_cols=120 Identities=17% Similarity=0.199 Sum_probs=104.2
Q ss_pred HHHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
......++..+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++++..++.++++++.+|+.++++
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 110 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF 110 (267)
T ss_dssp HHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC
T ss_pred HHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC
Confidence 344445555554 667889999999999999999998767999999999 999999999999988889999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|++..+.+++ ++..+++++.++|||||++++...+
T Consensus 111 ~~~~fD~i~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNI----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CTTCEEEEEESSCGGGT----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCCEEEEEEcCCceec----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 78899999999887765 4678999999999999999988765
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.71 E-value=4.1e-17 Score=147.27 Aligned_cols=109 Identities=17% Similarity=0.262 Sum_probs=94.1
Q ss_pred cCCCcceeeccCCCchHHHHHHHc---CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEe
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA---GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIIS 274 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~---g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis 274 (319)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+ |++.|++++...+...+++++++|+.++++ ++||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--ccccccee
Confidence 457789999999999999999885 234899999999 999999999998887899999999998765 47999999
Q ss_pred ccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 275 EWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 275 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.+.+++.. .....+|++++++|||||.|++....
T Consensus 146 ~~~l~~~~~-~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 146 NFTLQFLEP-SERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeeeecCc-hhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 988887643 55678999999999999999986543
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.71 E-value=6.9e-17 Score=144.01 Aligned_cols=120 Identities=16% Similarity=0.224 Sum_probs=103.3
Q ss_pred HHHHHHHhccc-ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNK-SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l-~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
......++..+ ...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.+++++...++.++++++.+|+.++++
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF 110 (257)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS
T ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC
Confidence 44455555555 5567789999999999999999997555999999999 999999999999987789999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|+++.+.+++ +...+++++.++|||||++++...+
T Consensus 111 ~~~~fD~v~~~~~l~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 111 QNEELDLIWSEGAIYNI----GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp CTTCEEEEEEESCSCCC----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCCEEEEEecChHhhc----CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 88899999998877665 4678999999999999999988754
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.70 E-value=6.3e-17 Score=144.19 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=104.5
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
......+.++..+...++.+|||+|||+|.++..+++....+|+|+|+|+ +++.+++++...++.++++++.+|+.+.+
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 34566677777778888899999999999999999986344999999999 99999999999888779999999999887
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+ .++||+|++..+.+++ .++..+++++.++|||||.+++....
T Consensus 100 ~-~~~fD~V~~~~~~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIA---GGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp C-SSCEEEEEEESCGGGT---SSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred c-CCCCCEEEECCChHhc---CCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 6 6899999997776665 45688999999999999999987543
No 14
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.70 E-value=7.3e-18 Score=168.00 Aligned_cols=148 Identities=18% Similarity=0.262 Sum_probs=114.6
Q ss_pred hhhhhhhchhHHHHHHHHHHHhcCCC-CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHHHHHHHHhccccc
Q psy8709 121 HIHAEMIKDTVRTESYKSAILNNNSL-FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTESYKSAILNNKSL 199 (319)
Q Consensus 121 ~~~~~m~~d~~r~~~~~~~i~~n~~~-~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~~~~~~i~~~l~~ 199 (319)
..++.|.+|.+|+..|.++|..+... +++ .
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~-------------------------------------------------~ 407 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGAD-------------------------------------------------G 407 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-------------------------------------------------C
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcc-------------------------------------------------c
Confidence 45779999999999999999876321 110 0
Q ss_pred CCCcceeeccCCCchHHHHHHHc----C----------CCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA----G----------AAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~----g----------~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
.++..|||+|||+|.++.++.++ + ..+|+|||.+++...+.+....|++.++|+++++|++++.+|
T Consensus 408 ~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 408 RKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp CSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccc
Confidence 11257888888888887544332 1 239999999993334444444588888999999999999874
Q ss_pred -----CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcceeecccc
Q psy8709 266 -----VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLSLCGAYA 318 (319)
Q Consensus 266 -----~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~~~~~ 318 (319)
.+++|+|||+++++++..|- ....|..+.++|||||+++|+.+++|++|+++
T Consensus 488 ~~~~~~ekVDIIVSElmGsfl~nEL-~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~ 544 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELLGSFGDNEL-SPECLDGVTGFLKPTTISIPQKYTSYVKPIMS 544 (745)
T ss_dssp HHHTTCCCCSEEEECCCBTTBGGGS-HHHHHHTTGGGSCTTCEEESCEEEEEEEEEEC
T ss_pred cccCCCCcccEEEEeccccccchhc-cHHHHHHHHHhCCCCcEEECCccEEEEEEecC
Confidence 48999999999999876653 45677888999999999999999999999875
No 15
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.70 E-value=4.3e-17 Score=141.15 Aligned_cols=140 Identities=19% Similarity=0.164 Sum_probs=104.1
Q ss_pred cCCceEEeeecCCCcccHHHHHHHHhcccccC-CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc
Q psy8709 169 AGAAKVFAIEKSGTPIRTESYKSAILNNKSLF-NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN 246 (319)
Q Consensus 169 ~ga~~V~avd~d~~~~~~~~~~~~i~~~l~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~ 246 (319)
+....+........++..+.+.+.+.+.+... ++.+|||+|||+|.++..++..+..+|+|+|+|+ +++.|++++..+
T Consensus 20 ~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 99 (201)
T 2ift_A 20 WRGRKLPVLNSEGLRPTGDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL 99 (201)
T ss_dssp TTTCEEECC---------CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred eCCcEecCCCCCCcCcCHHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh
Confidence 34444544444445566666666666665443 6789999999999999988887777999999999 999999999998
Q ss_pred CCC-CcEEEEEcCcccccc--CCCc-eeEEEeccchhhhcchhhHHHHHHHH--hcccCCCcEEEeecCcce
Q psy8709 247 KYD-SQIEVYHKLLEDVEL--PVES-VDIIISEWMGYFLLFETMIDSVIDAR--NRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 247 g~~-~~i~~i~~d~~~~~~--~~~~-fD~Iis~~~~~~l~~~~~~~~~l~~~--~r~LkpgG~li~~~~t~~ 312 (319)
++. ++++++.+|+.+... +.++ ||+|+++++++ ......++..+ .++|+|||.++++.++..
T Consensus 100 ~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 100 KCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 874 689999999987532 3468 99999998843 25567788888 788999999998887665
No 16
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.69 E-value=3.3e-17 Score=141.98 Aligned_cols=144 Identities=15% Similarity=0.120 Sum_probs=108.3
Q ss_pred HHHHhcCCceEEeeecCCCcccHHHHHHHHhcccccC-CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHH
Q psy8709 164 IFAAQAGAAKVFAIEKSGTPIRTESYKSAILNNKSLF-NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETID 241 (319)
Q Consensus 164 i~aa~~ga~~V~avd~d~~~~~~~~~~~~i~~~l~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~ 241 (319)
+.+..+....+...+....++..+.+.+.+++.+... ++.+|||+|||+|.++..++..+..+|+|+|+|+ +++.|++
T Consensus 16 ii~g~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~ 95 (202)
T 2fpo_A 16 IIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIK 95 (202)
T ss_dssp CCSGGGTTCEEECCCC------CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred EEEEEEcCcEecCCCCCCCCCCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHH
Confidence 3344555666666555556667777777777766543 6789999999999999998887777999999999 9999999
Q ss_pred HHHhcCCCCcEEEEEcCcccc-ccCCCceeEEEeccchhhhcchhhHHHHHHHHh--cccCCCcEEEeecCcce
Q psy8709 242 IIRKNKYDSQIEVYHKLLEDV-ELPVESVDIIISEWMGYFLLFETMIDSVIDARN--RFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 242 ~~~~~g~~~~i~~i~~d~~~~-~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~~~t~~ 312 (319)
++..+++ ++++++++|+.+. +.+.++||+|+++++++. .....++..+. ++|+|||+++++..+..
T Consensus 96 ~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 96 NLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPFRR----GLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp HHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSSST----TTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred HHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCCCC----CcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 9999988 7899999999874 444578999999988432 34556666664 46999999998877654
No 17
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.69 E-value=2.4e-17 Score=139.75 Aligned_cols=138 Identities=20% Similarity=0.154 Sum_probs=106.1
Q ss_pred CceEEeeecCCCcccHHHHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC
Q psy8709 171 AAKVFAIEKSGTPIRTESYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY 248 (319)
Q Consensus 171 a~~V~avd~d~~~~~~~~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~ 248 (319)
...+........++..+.+.+.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++
T Consensus 13 ~~~~~~~~~~~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 92 (187)
T 2fhp_A 13 GRRLKALDGDNTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE 92 (187)
T ss_dssp TCBCCCCCCCSSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CccccCCCCCCcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 3333333333456667778777777764 456789999999999999998888777999999999 99999999999887
Q ss_pred CCcEEEEEcCcccccc----CCCceeEEEeccchhhhcchhhHHHHHHHH--hcccCCCcEEEeecCcce
Q psy8709 249 DSQIEVYHKLLEDVEL----PVESVDIIISEWMGYFLLFETMIDSVIDAR--NRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 249 ~~~i~~i~~d~~~~~~----~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~--~r~LkpgG~li~~~~t~~ 312 (319)
.++++++.+|+.+... +.++||+|+++++++. .....++..+ .++|+|||++++..+...
T Consensus 93 ~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 93 PEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 6789999999977421 2578999999988442 2334555555 899999999998766543
No 18
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=1.2e-16 Score=143.75 Aligned_cols=122 Identities=17% Similarity=0.172 Sum_probs=106.5
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.++..+...++.+|||+|||+|.++..+++....+|+|+|+|+ +++.+++++...++.++++++.+|+.++++
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC
Confidence 3566677778888888899999999999999999985345999999999 999999999998887789999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|++..+.+++ .+...+++++.++|||||++++....
T Consensus 126 ~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 126 EDASFDAVWALESLHHM---PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp CTTCEEEEEEESCTTTS---SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCCccEEEEechhhhC---CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 87899999998877765 45688999999999999999987643
No 19
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.69 E-value=4.4e-17 Score=137.43 Aligned_cols=130 Identities=21% Similarity=0.167 Sum_probs=97.6
Q ss_pred cCCCcccHHHHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEE
Q psy8709 179 KSGTPIRTESYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYH 256 (319)
Q Consensus 179 ~d~~~~~~~~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~ 256 (319)
....++.++.+.+.+.+.+. ..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++.+++.++++++.
T Consensus 8 ~~~~rp~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 87 (177)
T 2esr_A 8 GKITRPTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK 87 (177)
T ss_dssp ----------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC
T ss_pred CCCCCcCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 33455566666777766665 567789999999999999999998777999999999 9999999999998867899999
Q ss_pred cCcccc-ccCCCceeEEEeccchhhhcchhhHHHHHHHHh--cccCCCcEEEeecCcce
Q psy8709 257 KLLEDV-ELPVESVDIIISEWMGYFLLFETMIDSVIDARN--RFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 257 ~d~~~~-~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~~~t~~ 312 (319)
+|+.+. +...++||+|+++++++. .....++..+. ++|+|||+++++.....
T Consensus 88 ~d~~~~~~~~~~~fD~i~~~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 88 MEAERAIDCLTGRFDLVFLDPPYAK----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SCHHHHHHHBCSCEEEEEECCSSHH----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CcHHHhHHhhcCCCCEEEECCCCCc----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 999873 333467999999987542 33455566665 99999999998776543
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.68 E-value=9.8e-17 Score=138.89 Aligned_cols=119 Identities=19% Similarity=0.279 Sum_probs=102.5
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.+...+...++ +|||+|||+|.++..+++.+..+|+|+|+|+ +++.+++++...+..++++++.+|+.++++
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 34555666666665555 9999999999999999987445999999999 999999999999887799999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+.++||+|++..+.+++ .++..+++++.++|+|||.+++..
T Consensus 108 ~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFW---EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccEEEECchHhhc---cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 88899999998877766 567889999999999999999864
No 21
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=1.5e-16 Score=142.41 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=96.8
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCcee
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVD 270 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD 270 (319)
.++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++++...+. .++.++.+|++++++++++||
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~fD 105 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQMPFTDERFH 105 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CCCSCTTCEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhCCCCCCCEE
Confidence 344445566778999999999999999999865 999999999 99999999988887 579999999999888888999
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+|++....+++ .++..++.++.++|||||++++..
T Consensus 106 ~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 106 IVTCRIAAHHF---PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEhhhhHhc---CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 99998887776 566799999999999999999853
No 22
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.68 E-value=8.2e-17 Score=139.59 Aligned_cols=109 Identities=9% Similarity=-0.018 Sum_probs=88.7
Q ss_pred ccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcC-----------CCCcEEEEEcCccccc
Q psy8709 196 NKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNK-----------YDSQIEVYHKLLEDVE 263 (319)
Q Consensus 196 ~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g-----------~~~~i~~i~~d~~~~~ 263 (319)
.+...++.+|||+|||+|..+..+++.|. +|+|+|+|+ |++.|+++..... ...+++++++|+.+++
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 34455778999999999999999999876 999999999 9999988754310 1257999999999987
Q ss_pred cCC-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEe
Q psy8709 264 LPV-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 264 ~~~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
++. ++||+|++..+++++. ......++++++++|||||++++
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEE
T ss_pred cccCCCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEE
Confidence 654 6899999987776654 45677899999999999998443
No 23
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.67 E-value=4.7e-16 Score=142.54 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=105.1
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
....+.++..+...++.+|||+|||+|.++..+++. | .+|+|+|+|+ +++.|++++...++.++++++.+|+.++
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--
Confidence 445667777788888899999999999999999997 7 5999999999 9999999999999877999999999876
Q ss_pred CCCceeEEEeccchhhhcch------hhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 PVESVDIIISEWMGYFLLFE------TMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~------~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.++||+|++..+.+++... .....+++++.++|||||++++...+.
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 4899999999888776432 567899999999999999999876643
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.67 E-value=3.2e-16 Score=136.52 Aligned_cols=123 Identities=12% Similarity=0.097 Sum_probs=102.7
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCC----cEEEEEcCcc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDS----QIEVYHKLLE 260 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~----~i~~i~~d~~ 260 (319)
....+.+...+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++..+++.. +++++.+|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4455666666666778899999999999999999964 46999999999 9999999998887754 8999999998
Q ss_pred ccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 261 DVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
..+.+.++||+|++..+.+++ .......+++++.++|||||++++....
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred cccccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 777666899999998888776 3356689999999999999988865543
No 25
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=2.1e-16 Score=137.35 Aligned_cols=118 Identities=16% Similarity=0.130 Sum_probs=100.5
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+...+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++.... .+++++.+|+.+.+ +
T Consensus 37 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~ 111 (216)
T 3ofk_A 37 ERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-T 111 (216)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-C
T ss_pred HHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-C
Confidence 35555565566777778999999999999999999865 999999999 999999887654 38999999999887 5
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.++||+|+++.+.+++.....+..++.++.++|||||.+++++.
T Consensus 112 ~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 68999999999888887666778899999999999999998653
No 26
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.66 E-value=4.4e-16 Score=135.74 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=101.3
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCC----cEEEEEcCcc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDS----QIEVYHKLLE 260 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~----~i~~i~~d~~ 260 (319)
....+.+...+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++..+++.. +++++.+|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 4445566666666677899999999999999999864 36999999999 9999999988777654 8999999998
Q ss_pred ccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 261 DVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
..+.+.++||+|++..+.+++ .......+++++.++|||||+++.....
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccccccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 777767899999998887776 3345689999999999999977755443
No 27
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.66 E-value=3e-16 Score=143.17 Aligned_cols=120 Identities=18% Similarity=0.119 Sum_probs=104.1
Q ss_pred HHHHHHHhccc----ccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 187 ESYKSAILNNK----SLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 187 ~~~~~~i~~~l----~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
....+.++..+ ...++.+|||+|||+|.++..+++. +. +|+|+|+|+ +++.++++....++.++++++.+|+.
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc
Confidence 45556666666 6678889999999999999999986 55 999999999 99999999988888789999999999
Q ss_pred ccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 261 DVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+++++.++||+|++..+.+++ .++..+++++.++|||||++++....
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHS---PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCCCCCEeEEEecchhhhc---CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 988888899999998877766 44789999999999999999987543
No 28
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.66 E-value=4.7e-16 Score=143.33 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=102.0
Q ss_pred HHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCC
Q psy8709 189 YKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPV 266 (319)
Q Consensus 189 ~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~ 266 (319)
..+.++..+. ..++.+|||+|||+|.++..+++....+|+|+|+++ +++.|++++..+++.++++++.+|+.+++++.
T Consensus 104 ~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 104 QAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 3456677776 777889999999999999999987234999999999 99999999999998779999999999988888
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
++||+|++..+.+++ + +..+++++.++|||||++++...
T Consensus 184 ~~fD~V~~~~~l~~~---~-~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 184 GAVTASWNNESTMYV---D-LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp TCEEEEEEESCGGGS---C-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeEEEECCchhhC---C-HHHHHHHHHHHcCCCcEEEEEEc
Confidence 899999998887766 2 78999999999999999997653
No 29
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.65 E-value=4.6e-16 Score=138.60 Aligned_cols=114 Identities=23% Similarity=0.305 Sum_probs=98.2
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
...+...+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++.. ..+++++.+|+.+++++.++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~ 108 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDA 108 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTC
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCC
Confidence 445666667777899999999999999999998777999999999 9998887764 36899999999998887889
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
||+|++..+.+++ .++..+++++.++|||||.++++..+
T Consensus 109 fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 109 YNVVLSSLALHYI---ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEEchhhhhh---hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999998877766 56789999999999999999987544
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=1.2e-15 Score=132.37 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=100.8
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
......+...++..+...++.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|+++++.+++.++++++.+|+.+
T Consensus 37 ~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 37 QITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 3445667777778888888899999999999999999998 55999999999 999999999999986689999999988
Q ss_pred cccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 262 VELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.....++||+|+++... ... ++.++.++|||||+++++.++.
T Consensus 116 ~~~~~~~~D~v~~~~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 116 ALADLPLPEAVFIGGGG-------SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp GGTTSCCCSEEEECSCC-------CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred hcccCCCCCEEEECCcc-------cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 43333689999986632 344 8999999999999999987754
No 31
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.65 E-value=2.1e-15 Score=137.71 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=86.8
Q ss_pred cCCCcceeeccCCCchHH-HHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILS-IFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls-~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
..++.+|||||||+|.++ ..+++....+|+|+|+++ +++.|+++++..|+ ++++++++|+.+++ .++||+|++..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECC
Confidence 345589999999998765 555664455999999999 99999999999888 89999999998865 57999999754
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
. ..+...+++++.++|||||++++......
T Consensus 197 ~------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~ 226 (298)
T 3fpf_A 197 L------AEPKRRVFRNIHRYVDTETRIIYRTYTGM 226 (298)
T ss_dssp T------CSCHHHHHHHHHHHCCTTCEEEEEECCGG
T ss_pred C------ccCHHHHHHHHHHHcCCCcEEEEEcCcch
Confidence 3 15678899999999999999998765443
No 32
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.64 E-value=9.8e-16 Score=139.18 Aligned_cols=112 Identities=15% Similarity=0.136 Sum_probs=97.7
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc-CCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL-PVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~-~~~~fD~Iis~~ 276 (319)
..++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++....+...+++++.+|+.+.++ +.++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 356789999999999999998888777999999999 999999999888876789999999998876 568999999987
Q ss_pred chhhh-cchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 277 MGYFL-LFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 277 ~~~~l-~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++. .+......+++++.++|+|||.+++..++
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 76653 45677899999999999999999987655
No 33
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.64 E-value=5e-16 Score=135.12 Aligned_cols=116 Identities=21% Similarity=0.286 Sum_probs=99.6
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
+.++..+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++...++ .+++++.+|+.+++++.+
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-KNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEecccccCCCCCC
Confidence 345555566778899999999999999999864 45999999999 99999999988887 489999999999888888
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+||+|++..+.+++ .+...+++++.++|+|||.+++....
T Consensus 106 ~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 106 TVDFIFMAFTFHEL---SEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp CEEEEEEESCGGGC---SSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEeehhhhhc---CCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 99999998887766 46788999999999999999987543
No 34
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=6.5e-16 Score=136.84 Aligned_cols=114 Identities=15% Similarity=0.264 Sum_probs=98.5
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCce
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESV 269 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~f 269 (319)
..++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++++..++. .+++++.+|+++++++.++|
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~f 88 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPFPDDSF 88 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCSCTTCE
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccCCCCCCcE
Confidence 3444556677889999999999999999998865 999999999 99999999988887 58999999999988887899
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
|+|++..+.+++ .++..++.++.++|||||++++...
T Consensus 89 D~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 89 DIITCRYAAHHF---SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECCchhhc---cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999998777665 4678899999999999999998643
No 35
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.64 E-value=1.1e-15 Score=137.87 Aligned_cols=119 Identities=16% Similarity=0.223 Sum_probs=102.4
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
+.+.+.+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.+++++...+. .+++++.+|+.++++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~ 101 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPF 101 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCS
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCC
Confidence 4455566666667788999999999999999999863 56999999999 99999999998887 589999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+.++||+|++..+.+++ .+...+++++.++|||||++++...
T Consensus 102 ~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHL---QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeeEEEEechhhhc---CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 88899999998887766 4567899999999999999998654
No 36
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.64 E-value=7.8e-16 Score=140.02 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=103.1
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCC---CcEEEEEcCcc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYD---SQIEVYHKLLE 260 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~---~~i~~i~~d~~ 260 (319)
..+.+.+.+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++....+.. .++.+..+|+.
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 4466677777777777788999999999999999999876 999999999 999998877544321 46889999998
Q ss_pred ccc---cCCCceeEEEec-cchhhhcc----hhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 261 DVE---LPVESVDIIISE-WMGYFLLF----ETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~---~~~~~fD~Iis~-~~~~~l~~----~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+++ ++.++||+|++. .+++++.. ......+++++.++|||||+++++..+
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 877 677899999997 56666644 455899999999999999999987654
No 37
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.64 E-value=6.1e-16 Score=138.12 Aligned_cols=120 Identities=20% Similarity=0.247 Sum_probs=101.9
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
.....+.++..+...++.+|||+|||+|.++..+++....+|+|+|+|+ +++.++++.... .+++++.+|+.+.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~ 116 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF 116 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC
Confidence 4555677788888888899999999999999999986234999999999 999888766544 689999999999888
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+.++||+|++..+.+++. ..++..+++++.++|||||.+++...
T Consensus 117 ~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALS-LENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CTTCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcEEEEeHHHHHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 889999999988777653 36788999999999999999998764
No 38
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.64 E-value=9.7e-16 Score=137.55 Aligned_cols=106 Identities=16% Similarity=0.003 Sum_probs=87.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHh----------cC------CCCcEEEEEcCcccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRK----------NK------YDSQIEVYHKLLEDV 262 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~----------~g------~~~~i~~i~~d~~~~ 262 (319)
.++.+|||+|||+|..+..+++.|. +|+|+|+|+ +++.|++.... .+ ...+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4568999999999999999999987 999999999 99998765431 00 125899999999998
Q ss_pred ccCC-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 263 ELPV-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 263 ~~~~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
+.+. ++||+|++..+++++. ......+++++.++|||||++++.
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 7654 7999999987777664 456788999999999999999643
No 39
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.64 E-value=1.1e-15 Score=138.69 Aligned_cols=105 Identities=21% Similarity=0.269 Sum_probs=93.2
Q ss_pred CcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEEEeccchh
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDIIISEWMGY 279 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~Iis~~~~~ 279 (319)
+.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|++++...++.++++++.+|+.+++ ++.++||+|++..+.+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 57999999999999999999865 999999999 99999999999888789999999999887 6678999999988877
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++ .++..+++++.++|||||++++...+
T Consensus 148 ~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 148 WV---ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GC---SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cc---cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 66 45688999999999999999987653
No 40
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.63 E-value=1.9e-15 Score=129.04 Aligned_cols=111 Identities=22% Similarity=0.259 Sum_probs=94.5
Q ss_pred HhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeE
Q psy8709 193 ILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDI 271 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~ 271 (319)
+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++++..++. .+++++.+|+.+.++ .++||+
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-~~~~D~ 100 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-DRQYDF 100 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-CCCEEE
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-CCCceE
Confidence 33444555678999999999999999999865 999999999 99999999988877 579999999998877 689999
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
|++..+.+++. ......+++++.++|+|||.+++.
T Consensus 101 v~~~~~l~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 101 ILSTVVLMFLE-AKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp EEEESCGGGSC-GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99988877753 357789999999999999997753
No 41
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.63 E-value=1.8e-15 Score=137.30 Aligned_cols=120 Identities=21% Similarity=0.175 Sum_probs=103.1
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
....+.++..+...++.+|||+|||+|.++..+++ .+. +|+|+|+|+ +++.+++++...+..++++++.+|+.+++
T Consensus 50 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 127 (287)
T 1kpg_A 50 IAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD- 127 (287)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-
T ss_pred HHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-
Confidence 55667778888888889999999999999999985 565 999999999 99999999998888789999999997654
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++||+|++..+.+++.. ..+..+++++.++|||||.+++...+.
T Consensus 128 --~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp --CCCSEEEEESCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred --CCeeEEEEeCchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 78999999887776533 567889999999999999999876543
No 42
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=1.2e-15 Score=129.40 Aligned_cols=110 Identities=16% Similarity=0.097 Sum_probs=88.4
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~Iis~~ 276 (319)
..++.+|||+|||+|.++..+++. ..+|+|+|+|+ +++.|+++++.+++ ++++++.++...+. ++.++||+|+++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 346789999999999999999998 55999999999 99999999999888 78999998887753 3457899999874
Q ss_pred chhh------hcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 277 MGYF------LLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 277 ~~~~------l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+.. .........++.++.++|||||.+++...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2211 012345667899999999999999976543
No 43
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.63 E-value=2.6e-15 Score=129.56 Aligned_cols=119 Identities=23% Similarity=0.287 Sum_probs=101.7
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV 262 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~ 262 (319)
..+.+...++..+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++..+++ ++++++.+|+.+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 456677778888888888999999999999999999974 56999999999 99999999998888 7899999999765
Q ss_pred ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 263 ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 263 ~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
....++||+|+++...+ ....+++++.++|+|||++++...+
T Consensus 103 ~~~~~~~D~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CTTSCCCSEEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhcCCCCCEEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 44447899999877542 5678999999999999999987654
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=1.4e-15 Score=127.82 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=98.5
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
...+.+...++..+...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.+++++..++..+++ ++.+|..+
T Consensus 8 ~t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 8 LTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp SHHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred ccHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 455677788888888888899999999999999999986 456999999999 999999999999886688 88888854
Q ss_pred cccCC--CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 262 VELPV--ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 262 ~~~~~--~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.++. ++||+|+++...++ ..+++++.++|+|||++++...+.
T Consensus 87 -~~~~~~~~~D~i~~~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 87 -AFDDVPDNPDVIFIGGGLTA-------PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp -GGGGCCSCCSEEEECC-TTC-------TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred -hhhccCCCCCEEEECCcccH-------HHHHHHHHHhcCCCCEEEEEeecc
Confidence 3333 78999998776543 568889999999999999877653
No 45
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.62 E-value=1.5e-15 Score=133.93 Aligned_cols=119 Identities=14% Similarity=0.169 Sum_probs=98.9
Q ss_pred HHHHHHhcccccC--CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 188 SYKSAILNNKSLF--NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 188 ~~~~~i~~~l~~~--~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
.+.+.+...+... ++.+|||+|||+|.++..+++.+. +++|+|+|+ +++.++++....+. +++++.+|+.+.++
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc
Confidence 3444444444332 668999999999999999999865 899999999 99999999887765 78999999998877
Q ss_pred CCCceeEEEecc-chhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEW-MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~-~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+ ++||+|++.. +.+++.....+..+++++.++|+|||.++++..+
T Consensus 99 ~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 99 N-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp S-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred c-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 7 8999999987 7777766678899999999999999999986543
No 46
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.62 E-value=1.1e-15 Score=135.93 Aligned_cols=118 Identities=15% Similarity=0.173 Sum_probs=99.2
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPV 266 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~ 266 (319)
.....++..+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++.... .+++++.+|+.+++++.
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCS
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCC
Confidence 33455566666667889999999999999999887666899999999 999998877554 57999999999988777
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
++||+|++..+.+++.. ..+..+++++.++|||||++++...
T Consensus 157 ~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCEEEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 89999999888776533 5678999999999999999998764
No 47
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=4.8e-16 Score=139.95 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=90.0
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
+.+.+++....+ .+.+|||+|||+|.++..+++.+. +|+|+|+|+ |++.|++ ..+++++++++++++++
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhccc
Confidence 556666665543 346899999999999999999865 999999999 8876642 25899999999999999
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+++||+|++..++||+ +.+.++.++.|+|||||+|++..
T Consensus 97 ~~sfD~v~~~~~~h~~----~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF----DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp SSCEEEEEECSCCTTC----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccEEEEeeehhHh----hHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999998887775 35678999999999999998644
No 48
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.3e-15 Score=137.73 Aligned_cols=115 Identities=15% Similarity=0.177 Sum_probs=96.3
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHH--cCCCEEEEEecHH-HHHHHHHHHHhc-CCCCcEEEEEcCcccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ--AGAAKVFAIEKSD-IAYETIDIIRKN-KYDSQIEVYHKLLEDV 262 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~--~g~~~V~gvD~s~-~i~~a~~~~~~~-g~~~~i~~i~~d~~~~ 262 (319)
..+.+.+..... .++.+|||+|||+|.++..+++ .+..+|+|+|+|+ +++.|++++... +...+++++++|++++
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 344455544433 4678999999999999999997 3567999999999 999999998886 4457999999999998
Q ss_pred ccCC------CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEe
Q psy8709 263 ELPV------ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 263 ~~~~------~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
+++. ++||+|++..+.+++ ++..++.++.++|+|||.+++
T Consensus 102 ~~~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 8776 799999998887776 678899999999999999987
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.62 E-value=1.1e-15 Score=140.39 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=97.7
Q ss_pred ccCCCcceeeccCCCchHHHHHH--HcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEe
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAA--QAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIIS 274 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la--~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis 274 (319)
...++.+|||+|||+|.++..++ ..+..+|+|+|+|+ +++.+++++...+..++++++.+|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 34567899999999999999885 34566999999999 9999999999988877899999999998877 89999999
Q ss_pred ccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 275 EWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 275 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.+.+++........+++++.++|||||+++++..+
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 988887766666677999999999999999987643
No 50
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=1.8e-15 Score=135.88 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=93.2
Q ss_pred cccC-CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCCceeEE
Q psy8709 197 KSLF-NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVESVDII 272 (319)
Q Consensus 197 l~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~~fD~I 272 (319)
.... ++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++.++++++++|+.+.. ++.++||+|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 3455 6789999999999999999998666999999999 99999999999999888999999998875 446899999
Q ss_pred Eeccchhhhcc-----------------hhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 273 ISEWMGYFLLF-----------------ETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 273 is~~~~~~l~~-----------------~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++|++++.... ...+..++..+.++|+|||++++..
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 99988654300 1345789999999999999999854
No 51
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=139.24 Aligned_cols=111 Identities=14% Similarity=0.224 Sum_probs=90.6
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCC-----------------------------
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKY----------------------------- 248 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~----------------------------- 248 (319)
.++.+|||||||+|.++..+++. +..+|+|+|+++ +++.|++++...+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 36789999999999999999985 566999999999 99999987665432
Q ss_pred ----------------------------CCcEEEEEcCccccc-----cCCCceeEEEeccchhhhc---chhhHHHHHH
Q psy8709 249 ----------------------------DSQIEVYHKLLEDVE-----LPVESVDIIISEWMGYFLL---FETMIDSVID 292 (319)
Q Consensus 249 ----------------------------~~~i~~i~~d~~~~~-----~~~~~fD~Iis~~~~~~l~---~~~~~~~~l~ 292 (319)
+.+++|+++|+.... +..++||+|+|..+.+|++ ....+..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 258999999997644 3568999999998887764 5567899999
Q ss_pred HHhcccCCCcEEEeecCc
Q psy8709 293 ARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 293 ~~~r~LkpgG~li~~~~t 310 (319)
+++++|+|||+|++....
T Consensus 205 ~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHEEEEEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCC
Confidence 999999999999987544
No 52
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.61 E-value=4.4e-15 Score=136.91 Aligned_cols=120 Identities=17% Similarity=0.105 Sum_probs=103.7
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
....+.++..+...++.+|||+|||+|.++..+++. +. +|+|+|+|+ +++.+++++...++.++++++.+|+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-
Confidence 556677778888888899999999999999999986 65 999999999 99999999998888778999999998764
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++||+|++..+++++.. .++..+++++.++|||||.+++...+.
T Consensus 154 --~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGH-ENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp --CCCSEEEEESCGGGTCG-GGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred --CCcCEEEEeChHHhcCH-HHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 78999999888776533 567899999999999999999876543
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=3.4e-15 Score=130.26 Aligned_cols=118 Identities=16% Similarity=0.215 Sum_probs=97.8
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
+.+.+.+...+. ++.+|||+|||+|.++..+++.+. +++|+|+|+ +++.++++...++ .+++++.+|+.+.+++
T Consensus 26 ~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~ 100 (227)
T 1ve3_A 26 ETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFE 100 (227)
T ss_dssp HHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCC
Confidence 445555555543 367999999999999999999866 999999999 9999999988776 5899999999988777
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.++||+|+++.+.++ .+......+++++.++|+|||.+++...+
T Consensus 101 ~~~~D~v~~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVH-FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TTCEEEEEEESCGGG-CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcEEEEEEcCchHh-CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 789999999877433 34467789999999999999999977654
No 54
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=4e-15 Score=132.27 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=94.7
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCce
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESV 269 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~f 269 (319)
..++......++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++....+. +++++.+|+.+.+++ ++|
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-CCc
Confidence 3334444445668999999999999999999865 999999999 99999999888765 799999999987765 689
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
|+|++...............+++++.++|+|||.++++..+
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 99998643333345567889999999999999999987654
No 55
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.61 E-value=3.3e-15 Score=131.30 Aligned_cols=118 Identities=19% Similarity=0.254 Sum_probs=96.0
Q ss_pred HHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 188 SYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 188 ~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
.+.+.+...+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.+++++...+ +++++.+|+.+.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF 106 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC
Confidence 33345555554 456789999999999999999986 356999999999 9999988875543 89999999999887
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+ ++||+|++..+.+++ .......+++++.++|||||.+++....
T Consensus 107 ~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 107 E-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp C-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 7 899999999888776 3344557999999999999999987644
No 56
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.61 E-value=3.8e-15 Score=132.84 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=90.5
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++++ .. ...+++++.+|+.+++++.++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AG-VDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TT-SCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hc-cCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 456678999999999999999999854 999999999 999999887 32 33689999999998888778999999988
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
+.+++ .+...++.++.++|+|||.+++.
T Consensus 113 ~l~~~---~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLV---PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGC---TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhc---CCHHHHHHHHHHHCCCCcEEEEE
Confidence 87776 46788999999999999999986
No 57
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.61 E-value=1.9e-15 Score=139.23 Aligned_cols=110 Identities=12% Similarity=0.095 Sum_probs=86.2
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCC-----cEEEEEcCc------ccc--ccCC
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDS-----QIEVYHKLL------EDV--ELPV 266 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~-----~i~~i~~d~------~~~--~~~~ 266 (319)
++.+|||+|||+|..+..++..+..+|+|+|+|+ |++.|+++....+... ++++.+.++ +++ +++.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4679999999999877666666666999999999 9999999887655311 367888887 333 2455
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++||+|+|..+.|++........++++++++|||||+|++++++
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 79999999887776544345689999999999999999987764
No 58
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.60 E-value=3e-15 Score=131.03 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=95.1
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC----CCcEEEEEcCccccccCCCceeEEEe
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY----DSQIEVYHKLLEDVELPVESVDIIIS 274 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~----~~~i~~i~~d~~~~~~~~~~fD~Iis 274 (319)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.+++++...+. ..++.++.+|+..++++.++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 3568999999999999999999865 999999999 99999998877765 24689999999998887889999999
Q ss_pred ccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 275 EWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 275 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
..+.+++........+++++.++|+|||++++...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 88888776656666899999999999999998754
No 59
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.60 E-value=3.7e-15 Score=135.31 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=93.0
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEec
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISE 275 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~ 275 (319)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++++..++. +++++.+|+.+.+. .++||+|+++
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~ 191 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVST 191 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEEC
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEc
Confidence 3344678999999999999999999976 999999999 99999999998887 89999999998776 5899999999
Q ss_pred cchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
.+++++. ......+++++.++|+|||.+++.
T Consensus 192 ~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 192 VVFMFLN-RERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp SSGGGSC-GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cchhhCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9888763 466789999999999999997753
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=5.1e-15 Score=125.44 Aligned_cols=120 Identities=18% Similarity=0.200 Sum_probs=100.3
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCC-cEEEEEcCccccccC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDS-QIEVYHKLLEDVELP 265 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~-~i~~i~~d~~~~~~~ 265 (319)
...+.++..+...++.+|||+|||+|.++..+++. ..+++|+|+++ +++.+++++..++..+ +++++.+|+.+. .+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~ 116 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VK 116 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cc
Confidence 45666666777778889999999999999999988 55999999999 9999999999888743 499999999874 34
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.++||+|++++++++ .......+++++.++|+|||.+++...+.
T Consensus 117 ~~~~D~v~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRA--GKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTT--CHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cCCceEEEECCCccc--chhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 578999999887653 23567889999999999999999887654
No 61
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=1.3e-15 Score=134.68 Aligned_cols=109 Identities=22% Similarity=0.233 Sum_probs=89.1
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc--ccCCCceeEEEe-
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV--ELPVESVDIIIS- 274 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~--~~~~~~fD~Iis- 274 (319)
..++.+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++....+ .+++++.+|+.++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 346689999999999999999887666999999999 9999999887766 5899999999988 777789999998
Q ss_pred ccch-hhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 275 EWMG-YFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 275 ~~~~-~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.... ....+......++++++++|||||+|++...
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 3321 1112334566889999999999999996544
No 62
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.60 E-value=3.5e-15 Score=128.85 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=97.2
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+...+ .++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++... ..+++++.+|+.+++++
T Consensus 30 ~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 30 SSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSC
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCC
Confidence 34555555543 55689999999999999999998766999999999 99999887654 25899999999988877
Q ss_pred CCceeEEEeccchhhhc------------chhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEWMGYFLL------------FETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~------------~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.++||+|+++.+++++. +......+++++.++|+|||.+++....
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 78999999988776553 2356789999999999999999976654
No 63
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.60 E-value=3e-15 Score=129.12 Aligned_cols=108 Identities=25% Similarity=0.370 Sum_probs=90.0
Q ss_pred cCCCcceeeccCCCchHHH-HHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILSI-FAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~-~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
..++.+|||+|||+|.++. .+++.+. +|+|+|+|+ +++.+++++...+ .+++++.+|+.+.+++.++||+|++..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcC
Confidence 4456899999999999854 4445554 999999999 9999999887766 378999999999888778999999987
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.+++. ......+++++.++|||||.++++..+
T Consensus 98 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 98 TIFHMR-KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hHHhCC-HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 766653 467889999999999999999987654
No 64
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.59 E-value=4e-15 Score=127.46 Aligned_cols=112 Identities=12% Similarity=0.125 Sum_probs=92.5
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEEE
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDIII 273 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~Ii 273 (319)
...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|++++..+++.++++++.+|+.++. ...++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3456789999999999999999986 456999999999 99999999999888779999999998875 4457899999
Q ss_pred eccchh------hhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 274 SEWMGY------FLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 274 s~~~~~------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
++.++. ..........++.++.++|||||++++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 986541 112233556799999999999999997753
No 65
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.59 E-value=2.7e-15 Score=137.22 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=95.6
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCC--CcEEEEEcCccccccC
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYD--SQIEVYHKLLEDVELP 265 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~--~~i~~i~~d~~~~~~~ 265 (319)
....++..+...+ .+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|++++...+.. .+++++++|+.++++
T Consensus 71 ~~~~~~~~~~~~~-~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~- 147 (299)
T 3g2m_A 71 EAREFATRTGPVS-GPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL- 147 (299)
T ss_dssp HHHHHHHHHCCCC-SCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-
T ss_pred HHHHHHHhhCCCC-CcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-
Confidence 3444444444333 4999999999999999999865 899999999 999999998876632 589999999999877
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
.++||+|++.....+.........+++++.++|||||+|+++..+..
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 48999999653323334445678999999999999999998776543
No 66
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.59 E-value=2.5e-15 Score=133.06 Aligned_cols=120 Identities=14% Similarity=0.180 Sum_probs=95.2
Q ss_pred HHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 188 SYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 188 ~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
.+.+.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++....+. .++.++.+|+.+++++
T Consensus 65 ~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~ 143 (241)
T 2ex4_A 65 KFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPE 143 (241)
T ss_dssp HHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCC
T ss_pred HHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCC
Confidence 33344443332 235789999999999999998887666999999999 99999988876642 5799999999988877
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.++||+|++..+.+++.. .....+++++.++|+|||++++...
T Consensus 144 ~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 144 PDSYDVIWIQWVIGHLTD-QHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SSCEEEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 678999999887776533 3467899999999999999998654
No 67
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.59 E-value=1.3e-15 Score=137.12 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=88.8
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC----------------------------
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY---------------------------- 248 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~---------------------------- 248 (319)
...++.+|||+|||+|.++..++..++.+|+|+|+|+ |++.|+++++.+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4556789999999999998887777777899999999 99999987765421
Q ss_pred CCcEE-EEEcCcccc-cc---CCCceeEEEeccchhhh-cchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 249 DSQIE-VYHKLLEDV-EL---PVESVDIIISEWMGYFL-LFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 249 ~~~i~-~i~~d~~~~-~~---~~~~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
..++. ++.+|+.+. ++ ..++||+|++..+.+++ .+.+++..++++++++|||||+|+++.
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01344 889999874 22 24689999999888875 344677889999999999999999875
No 68
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=7.7e-15 Score=130.70 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=96.0
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
......++..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.++++ ..+++++.+|+.+++
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~- 91 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK- 91 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC-
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC-
Confidence 444556777777778899999999999999999886 345999999999 99888876 257899999999887
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+.++||+|+++.+.+++ .+...++.++.++|+|||.+++...
T Consensus 92 ~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 92 PAQKADLLYANAVFQWV---PDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CSSCEEEEEEESCGGGS---TTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCcCEEEEeCchhhC---CCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 66899999998887776 5678999999999999999998764
No 69
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.58 E-value=3.8e-15 Score=131.31 Aligned_cols=112 Identities=18% Similarity=0.248 Sum_probs=93.3
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCcee
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVD 270 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD 270 (319)
.+...+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++... .+++++.+|+.+.+++.++||
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCce
Confidence 3444555567789999999999999999998766999999999 88888765432 479999999998887778999
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+|++..+.+++ .+...+++++.++|+|||.+++...+
T Consensus 110 ~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 110 LAYSSLALHYV---EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEecccccc---chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 99998776665 46789999999999999999987643
No 70
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.58 E-value=6.3e-15 Score=135.72 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=92.7
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcC------CCCcEEEEEcCccccc----cC--CC
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNK------YDSQIEVYHKLLEDVE----LP--VE 267 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g------~~~~i~~i~~d~~~~~----~~--~~ 267 (319)
++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.++++....+ ...+++++++|+.+.+ ++ .+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999999987667999999999 9999998876542 2257999999998875 43 35
Q ss_pred ceeEEEeccchhhh-cchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 268 SVDIIISEWMGYFL-LFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+||+|++..+.||+ .+......++.++.++|||||.+++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 89999999888877 56677889999999999999999987664
No 71
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.58 E-value=2.6e-15 Score=130.64 Aligned_cols=109 Identities=22% Similarity=0.259 Sum_probs=89.6
Q ss_pred HhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeE
Q psy8709 193 ILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDI 271 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~ 271 (319)
++..+...++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.++++.. .+++++.+|+.+++++ ++||+
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~ 109 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDT 109 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSE
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEE
Confidence 33334445678999999999999999999865 999999999 9988887653 4789999999998877 89999
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
|++..+.+++.. .....+++++.++|||||.+++...
T Consensus 110 v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 110 IVSTYAFHHLTD-DEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp EEEESCGGGSCH-HHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEECcchhcCCh-HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 999888777633 2334589999999999999998753
No 72
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=2e-15 Score=133.92 Aligned_cols=107 Identities=22% Similarity=0.244 Sum_probs=88.9
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc--ccCCCceeEEEecc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV--ELPVESVDIIISEW 276 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~--~~~~~~fD~Iis~~ 276 (319)
.+|.+|||||||+|..+..+++.+..+|+|||+|+ +++.|+++....+ .++.++.+++.+. .++.++||.|+.+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEee
Confidence 46789999999999999999987656999999999 9999999887766 4789999998765 46678999998764
Q ss_pred c--hhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 277 M--GYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 277 ~--~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+ .+.+.+..+...++.++.|+|||||+|++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 3 2334455678899999999999999998753
No 73
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=9.8e-16 Score=127.70 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=95.5
Q ss_pred CcccHHHHHHHHhcccccC--CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcC
Q psy8709 182 TPIRTESYKSAILNNKSLF--NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKL 258 (319)
Q Consensus 182 ~~~~~~~~~~~i~~~l~~~--~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d 258 (319)
.++..+.+.+.+...+... ++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.+++++..+++ +++++++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 96 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALP 96 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSC
T ss_pred CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEecc
Confidence 4555667777776665542 678999999999999999999876 599999999 99999999988877 89999999
Q ss_pred cccc-c-cC--CCceeEEEeccchhhhcchhhHHHHHHHHh--cccCCCcEEEeecCcce
Q psy8709 259 LEDV-E-LP--VESVDIIISEWMGYFLLFETMIDSVIDARN--RFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 259 ~~~~-~-~~--~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~~~t~~ 312 (319)
+.+. + .+ .++||+|+++++++ - ....++..+. ++|+|||.+++++.+..
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~~~-~----~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPPYA-M----DLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCTT-S----CTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHHhhhccCCceEEEEECCCCc-h----hHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 9774 2 11 24799999998755 2 2233444444 99999999998876543
No 74
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.58 E-value=3.9e-15 Score=131.24 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=86.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++... +++++.+|+.+. .+.++||+|++..+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHVL 113 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESCG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhHH
Confidence 4667999999999999999999866 899999999 99888876532 799999999887 456899999998877
Q ss_pred hhhcchhhHHHHHHHHh-cccCCCcEEEeecCc
Q psy8709 279 YFLLFETMIDSVIDARN-RFLKPDGVVCPNRFT 310 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~-r~LkpgG~li~~~~t 310 (319)
+++ .++..+++++. ++|||||++++...+
T Consensus 114 ~~~---~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 114 EHI---DDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp GGC---SSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred Hhh---cCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 766 45689999999 999999999987654
No 75
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=9.9e-15 Score=123.43 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=101.4
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV 262 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~ 262 (319)
+..+.+...++..+...++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.+++++..++...++.++.+|+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE- 93 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-
Confidence 5567778888888888888999999999999999999987 6999999999 999999999988876789999999877
Q ss_pred ccCC-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 263 ELPV-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 263 ~~~~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.++. ++||+|++..+.+ .+..++..+.++|+|||.+++..++
T Consensus 94 ~~~~~~~~D~v~~~~~~~------~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGG------ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHTTSCCEEEEEESCCTT------CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred hcccCCCCCEEEECCchH------HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 3332 5899999876542 3478899999999999999987654
No 76
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2e-15 Score=135.55 Aligned_cols=116 Identities=27% Similarity=0.359 Sum_probs=95.9
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
......+.+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.++++ .+++++.+|+++
T Consensus 16 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~-------~~~~~~~~d~~~ 87 (261)
T 3ege_A 16 RVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVH-------PQVEWFTGYAEN 87 (261)
T ss_dssp BCCCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCC-------TTEEEECCCTTS
T ss_pred ccccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhc-------cCCEEEECchhh
Confidence 33445677778888877888999999999999999999865 4999999999 77765432 289999999999
Q ss_pred cccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 262 VELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++++.++||+|++..+.+++ .++..+++++.++|| ||.+++....
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHF---SHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGC---SSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCCCCCEeEEEEcchHhhc---cCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 88888899999998877666 677899999999999 9977755443
No 77
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=6.6e-15 Score=133.82 Aligned_cols=104 Identities=24% Similarity=0.206 Sum_probs=90.4
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++++.+++.++++++++|+.+... .++||+|+++++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV 202 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCch
Confidence 45789999999999999999998766899999999 999999999999997779999999998765 5789999998763
Q ss_pred hhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 279 YFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.. ..++.++.++|+|||++++..++.
T Consensus 203 ~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 203 RT-------HEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SG-------GGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred hH-------HHHHHHHHHHCCCCeEEEEEEeec
Confidence 22 456778889999999999877763
No 78
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=1.1e-14 Score=126.09 Aligned_cols=114 Identities=13% Similarity=0.084 Sum_probs=95.6
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+...+...+...++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.+++++...+. .+++++.+|+.+...
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~ 139 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDL-HNVSTRHGDGWQGWQ 139 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCCG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCC-CceEEEECCcccCCc
Confidence 34556666777777888999999999999999999984 5999999999 99999999998887 489999999988665
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|+++...+++.. .+.++|||||++++...+
T Consensus 140 ~~~~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEEccchhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 5679999999876655432 467899999999987765
No 79
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.57 E-value=7.4e-15 Score=127.16 Aligned_cols=104 Identities=17% Similarity=0.135 Sum_probs=88.3
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.+++ .+. .+++++.+|+.+. ++.++||+|++..+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHW 116 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEech
Confidence 45667999999999999999999865 999999999 8888876 444 6899999999988 66789999999888
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+++.. .....+++++.++|+|||.+++...+
T Consensus 117 l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 117 LAHVPD-DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp GGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCH-HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 777633 44688999999999999999987654
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=1.2e-14 Score=122.03 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=99.9
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
++..+.+.+.+...+...++.+|||+|||+|.++..+++ +..+++|+|+++ +++.+++++..+++ ++++++.+|+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~ 94 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED 94 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc
Confidence 455677788888888888889999999999999999999 566999999999 99999999999887 689999999987
Q ss_pred cccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 262 VELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+++.++||+|+++.+ .....++.++.++ |||.+++..++.
T Consensus 95 -~~~~~~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 95 -VLDKLEFNKAFIGGT-------KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp -HGGGCCCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred -cccCCCCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 566578999998776 3457788888888 999999887543
No 81
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.57 E-value=1.2e-14 Score=127.45 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=88.2
Q ss_pred cCCCcceeeccCC-CchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-ccCCCceeEEEec
Q psy8709 199 LFNNKHVIDVGAG-TGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-ELPVESVDIIISE 275 (319)
Q Consensus 199 ~~~~~~VLDiGcG-tG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~~~~~~fD~Iis~ 275 (319)
..++.+|||+||| +|.++..+++....+|+|+|+++ +++.|++++..++. +++++.+|+... +++.++||+|+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEEC
Confidence 4567899999999 99999999987445999999999 99999999999887 899999997544 3455899999999
Q ss_pred cchhhhcc----------------hhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 276 WMGYFLLF----------------ETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 276 ~~~~~l~~----------------~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++++.... ...+..++.++.++|||||++++..
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 88654321 1224789999999999999999754
No 82
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=4.6e-15 Score=127.60 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=87.9
Q ss_pred CcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhh
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYF 280 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~ 280 (319)
+.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++. .+++++.+|+.+++++.++||+|++..+.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 68999999999999999999866 999999999 998888762 4789999999998888889999999887776
Q ss_pred hcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 281 LLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 281 l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+. ..++..+++++.++|+|||.+++....
T Consensus 115 ~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 115 MG-PGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp CC-TTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CC-HHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 53 347789999999999999999987643
No 83
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.57 E-value=5.1e-15 Score=130.43 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=90.0
Q ss_pred CcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhh
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYF 280 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~ 280 (319)
+.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++....+...+++++.+|+.+.+. .++||+|++..+.++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-TELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-SSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-CCCeeEEEEChhhhc
Confidence 35999999999999999988655 899999999 999999998776555789999999998764 469999999888776
Q ss_pred hcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 281 LLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 281 l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+. ......+++++.++|||||++++...
T Consensus 145 ~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 145 IE-PEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp SC-GGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-HHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 63 35788999999999999999997544
No 84
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=6.6e-15 Score=132.52 Aligned_cols=114 Identities=18% Similarity=0.113 Sum_probs=91.8
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHh---cCCCCcEEEEEcCccccc-------c
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRK---NKYDSQIEVYHKLLEDVE-------L 264 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~---~g~~~~i~~i~~d~~~~~-------~ 264 (319)
+...++.+|||+|||+|.++..+++.. ..+|+|+|+++ +++.|++++.. +++.++++++++|+.+.. +
T Consensus 32 ~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 32 VADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred hcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 345567899999999999999999864 46999999999 99999999988 888778999999998872 4
Q ss_pred CCCceeEEEeccchhhhc---------------chhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLL---------------FETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~---------------~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|+++++++... ....+..+++.+.++|||||.+++....
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 567899999998765431 1123678999999999999999875543
No 85
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=1.7e-14 Score=131.09 Aligned_cols=117 Identities=20% Similarity=0.280 Sum_probs=97.4
Q ss_pred HHHHHHhccc-ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 188 SYKSAILNNK-SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 188 ~~~~~i~~~l-~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
.+...+...+ ...++.+|||+|||+|.++..+++. + ..+|+|+|+|+ +++.+++++...+. +++++.+|+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC
Confidence 3444444443 5667789999999999999999986 3 36999999999 99999999887664 8999999999887
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++ ++||+|++..+.+++ .+...+++++.++|||||++++....
T Consensus 86 ~~-~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 LN-DKYDIAICHAFLLHM---TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CS-SCEEEEEEESCGGGC---SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cC-CCeeEEEECChhhcC---CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 75 699999998877665 56679999999999999999977665
No 86
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=1.5e-14 Score=127.41 Aligned_cols=117 Identities=20% Similarity=0.326 Sum_probs=97.1
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+...+. ++.+|||+|||+|.++..+++. .+|+|+|+|+ +++.|+++....+ .+++++.+|+.+.+++
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~ 94 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP 94 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC
Confidence 345555555543 4579999999999999999887 5999999999 9999999988766 4789999999988776
Q ss_pred CCceeEEEecc-chhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEW-MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~-~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++||+|++.. +.+++........+++++.++|+|||.++++..+
T Consensus 95 -~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 95 -EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp -SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 7899999875 6666666678889999999999999999986543
No 87
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.56 E-value=1.8e-14 Score=123.69 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=89.0
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchh
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGY 279 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~ 279 (319)
++ +|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++....+. ++.++.+|+.+.+++.++||+|++... +
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~-~ 104 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIFC-H 104 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEECC-C
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEhh-c
Confidence 45 999999999999999999866 999999999 99999999887765 799999999988877789999998532 2
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
........++.++.++|+|||.+++....
T Consensus 105 --~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 105 --LPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp --CCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred --CCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 24467889999999999999999987644
No 88
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.56 E-value=7.9e-15 Score=129.30 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=88.0
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchh
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGY 279 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~ 279 (319)
++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.++++. ...+++++.+|+.+++++.++||+|++..+.+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 567999999999999999999865 999999999 888877653 23689999999999888889999999987766
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++ .+...+++++.++|+|||++++....
T Consensus 128 ~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 128 WT---EEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SS---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hc---cCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 65 56678999999999999999987643
No 89
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.56 E-value=1e-14 Score=130.72 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=87.6
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc-ch
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW-MG 278 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~-~~ 278 (319)
++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++. .+++++.+|+.++++ .++||+|++.. +.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSI 121 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCC-SCCEEEEEECTTGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCc-cCCcCEEEEcCchh
Confidence 457999999999999999999865 999999999 998888764 278999999998877 58999999987 77
Q ss_pred hhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 279 YFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+++........+++++.++|||||.++++.
T Consensus 122 ~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 122 GHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp GGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 777666788899999999999999999974
No 90
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.56 E-value=1.8e-14 Score=136.72 Aligned_cols=123 Identities=18% Similarity=0.189 Sum_probs=101.1
Q ss_pred cHHHHHHHHhccc--ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 185 RTESYKSAILNNK--SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 185 ~~~~~~~~i~~~l--~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
.++.+.+.+...+ ...++.+|||+|||+|.++..+++.+. +|+++|+|+ +++.+++++..+++ +++++.+|+.+
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~ 291 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTT
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhh
Confidence 3455566665544 234667999999999999999999865 999999999 99999999999887 48999999998
Q ss_pred cccCCCceeEEEeccchhhhc--chhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 262 VELPVESVDIIISEWMGYFLL--FETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
...+.++||+|++++++++.. .......++.++.++|+|||.+++....
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 776668999999999877522 1356789999999999999999987554
No 91
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=1.3e-14 Score=128.58 Aligned_cols=103 Identities=16% Similarity=0.139 Sum_probs=87.8
Q ss_pred CCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC---CCceeEEEe
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP---VESVDIIIS 274 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~---~~~fD~Iis 274 (319)
.++.+|||+|||+|.++..++. .+..+|+|+|+|+ +++.+++++..+++ .+++++++|+.+++.+ .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL-ENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEeccHHHhcccccccCCccEEEE
Confidence 4678999999999999999986 3456999999999 99999999998888 4699999999887653 478999998
Q ss_pred ccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 275 EWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 275 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
..+ ..+..++..+.++|+|||.+++....
T Consensus 148 ~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 148 RAV-------ARLSVLSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp ECC-------SCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred ecc-------CCHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 653 45688999999999999999986543
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=2.1e-14 Score=124.95 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=89.4
Q ss_pred CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCCceeEEEecc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVESVDIIISEW 276 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~~fD~Iis~~ 276 (319)
++.+|||+|||+|.++..+++. +..+++|+|+|+ +++.|++++..+++ .+++++.+|+.+++ ++.++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4579999999999999999885 456999999999 99999999998888 78999999998876 6667899999987
Q ss_pred chhhhcch-----hhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 277 MGYFLLFE-----TMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 277 ~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+..+.... .....++.++.++|+|||.+++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 64332110 0236789999999999999998764
No 93
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.55 E-value=9.8e-15 Score=129.10 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=92.4
Q ss_pred HHHHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-
Q psy8709 186 TESYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV- 262 (319)
Q Consensus 186 ~~~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~- 262 (319)
.+.+.+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++ ++++.+|+.+.
T Consensus 25 ~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~ 94 (240)
T 3dli_A 25 RELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYL 94 (240)
T ss_dssp HHHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHh
Confidence 3455555555554 34568999999999999999999866 899999999 88877643 78889998875
Q ss_pred -ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 263 -ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 263 -~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+++.++||+|++..+.+++. ...+..+++++.++|||||+++++..+
T Consensus 95 ~~~~~~~fD~i~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFVEHLD-PERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HTSCTTCBSEEEEESCGGGSC-GGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred hhcCCCCeeEEEECCchhhCC-cHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 66778999999988887764 356789999999999999999987654
No 94
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.55 E-value=1.4e-14 Score=125.32 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=86.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++. ++.++.+|+.+++ +.++||+|++..+.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l 112 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACL 112 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCG
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCch
Confidence 3567999999999999999999865 999999999 999988876 4567889998887 66899999998887
Q ss_pred hhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 279 YFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+++. .+.+..+++++.++|||||++++....
T Consensus 113 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 113 LHVP-RDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcC-HHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 7764 357789999999999999999987543
No 95
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.55 E-value=4e-14 Score=128.16 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=101.2
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
++.++.+.+.+++.+. .++.+|||+|||+|.++..+++ .+..+|+|+|+|+ +++.+++++..+++ .+++++++|+.
T Consensus 92 r~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~-~~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTT
T ss_pred CchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEcchh
Confidence 4556777788877765 5667999999999999999986 4566999999999 99999999998887 47999999998
Q ss_pred ccccCCCceeEEEeccchhhhcc----------------------hhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 261 DVELPVESVDIIISEWMGYFLLF----------------------ETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~~~~~~fD~Iis~~~~~~l~~----------------------~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+. ++.++||+|+++++++.... ...+..++..+.++|+|||++++....
T Consensus 170 ~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 170 SA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp GG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred hh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 74 33578999999977543211 135678999999999999999987543
No 96
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.55 E-value=1.4e-14 Score=137.50 Aligned_cols=108 Identities=21% Similarity=0.289 Sum_probs=92.2
Q ss_pred cCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhc-----C-C-CCcEEEEEcCcccc------
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKN-----K-Y-DSQIEVYHKLLEDV------ 262 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~-----g-~-~~~i~~i~~d~~~~------ 262 (319)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++..+ | . ..+++++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 456789999999999999999885 355999999999 999999887654 3 2 25899999999987
Q ss_pred ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 263 ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 263 ~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+++.++||+|+++.+.+++ .++..+++++.++|||||++++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS---TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcC---CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7777899999999887776 4578999999999999999998753
No 97
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.55 E-value=2.4e-14 Score=125.35 Aligned_cols=111 Identities=14% Similarity=0.212 Sum_probs=89.2
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c-cC----CC
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E-LP----VE 267 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~-~~----~~ 267 (319)
+...++.+|||+|||+|..+..+++. ...+|+++|+++ +++.|+++++..++.++++++.+|+.+. + ++ .+
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 54 IREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCC
Confidence 33446689999999999999999984 256999999999 9999999999999877899999998653 2 22 16
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+||+|+++...+.. .....++..+ ++|+|||+++++.+..
T Consensus 134 ~fD~V~~d~~~~~~---~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 134 TLDMVFLDHWKDRY---LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp CCSEEEECSCGGGH---HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred ceEEEEEcCCcccc---hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 89999987654432 3344667777 9999999999987764
No 98
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.54 E-value=9.4e-16 Score=135.69 Aligned_cols=103 Identities=16% Similarity=0.008 Sum_probs=87.6
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchh
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGY 279 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~ 279 (319)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|++++..+++.++++++++|+.+.+ +.++||+|+++++++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 67899999999999999999987 5999999999 99999999999988678999999998876 457999999998877
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+.. .....+.++.++|+|||.+++..
T Consensus 156 ~~~---~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPD---YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGG---GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred Ccc---hhhhHHHHHHhhcCCcceeHHHH
Confidence 653 22335667788889998877664
No 99
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.54 E-value=2e-14 Score=136.21 Aligned_cols=118 Identities=13% Similarity=0.213 Sum_probs=96.1
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHH-------HhcCC-CCcEEEEE
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDII-------RKNKY-DSQIEVYH 256 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~-------~~~g~-~~~i~~i~ 256 (319)
......++..+...++.+|||+|||+|.++..++. .+..+|+|||+++ +++.|++++ +.+|+ ..+++|++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 55667777778888999999999999999999886 5666799999999 998888754 34455 36899999
Q ss_pred cCccccccCC--CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 257 KLLEDVELPV--ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 257 ~d~~~~~~~~--~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+|+.+.+++. ..||+|+++.+.+ ..++...|.++.+.|||||+|+...
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~F----~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFAF----GPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTTC----CHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred CcccCCccccccCCccEEEEccccc----CchHHHHHHHHHHcCCCCcEEEEee
Confidence 9999887643 4799999987642 2567788899999999999999653
No 100
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.54 E-value=2.3e-14 Score=123.59 Aligned_cols=100 Identities=26% Similarity=0.283 Sum_probs=87.2
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..++.. +++++.+|+.+.. .++||+|+++.+.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~~fD~i~~~~~~ 135 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV--DGKFDLIVANILA 135 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC--CSCEEEEEEESCH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC--CCCceEEEECCcH
Confidence 46689999999999999999998777999999999 999999999998884 4999999997643 4799999998765
Q ss_pred hhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 279 YFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++ +..+++++.++|+|||++++..
T Consensus 136 ~~------~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 136 EI------LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp HH------HHHHGGGSGGGEEEEEEEEEEE
T ss_pred HH------HHHHHHHHHHhcCCCCEEEEEe
Confidence 43 4788999999999999999864
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.54 E-value=1.3e-14 Score=127.36 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=87.4
Q ss_pred CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c--cCCCceeEEEec
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E--LPVESVDIIISE 275 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~--~~~~~fD~Iis~ 275 (319)
++.+|||||||+|.++..+++. +...|+|+|+|+ +++.|++++..+++ .++.++.+|+.++ + ++.++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4579999999999999999985 456899999999 99999999998888 5799999999875 2 567899999987
Q ss_pred cchhhhcchhh-----HHHHHHHHhcccCCCcEEEeecC
Q psy8709 276 WMGYFLLFETM-----IDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 276 ~~~~~l~~~~~-----~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.+..|...... ...++.++.++|||||++++.+.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 54333211111 13589999999999999998764
No 102
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=2.8e-14 Score=122.96 Aligned_cols=114 Identities=17% Similarity=0.181 Sum_probs=91.4
Q ss_pred HHHHHHHhcccccC---CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 187 ESYKSAILNNKSLF---NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 187 ~~~~~~i~~~l~~~---~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
+.+.+.++..+... ++.+|||+|||+|.++..++.. +..+++|+|+|+ +++.+++++..+++. +++++.+|+.+
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 126 (207)
T 1jsx_A 48 EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEE 126 (207)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTT
T ss_pred HHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhh
Confidence 33444444443322 4689999999999999999985 556999999999 999999999988874 59999999988
Q ss_pred cccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 262 VELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.. +.++||+|+++.. ..+..++..+.++|+|||.+++...
T Consensus 127 ~~-~~~~~D~i~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 127 FP-SEPPFDGVISRAF-------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp SC-CCSCEEEEECSCS-------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred CC-ccCCcCEEEEecc-------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 65 4478999998653 3457899999999999999998754
No 103
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=1.2e-14 Score=131.50 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=88.9
Q ss_pred HhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeE
Q psy8709 193 ILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDI 271 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~ 271 (319)
+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.++++. .+++++.+|+.+++++ ++||+
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~-~~fD~ 120 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVD-KPLDA 120 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCS-SCEEE
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcC-CCcCE
Confidence 3344455677899999999999999999954 5999999999 999887654 4688999999988764 79999
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
|++..+.+++ .++..++.++.++|||||++++...
T Consensus 121 v~~~~~l~~~---~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 121 VFSNAMLHWV---KEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhC---cCHHHHHHHHHHhcCCCcEEEEEec
Confidence 9998887776 4677899999999999999998654
No 104
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.54 E-value=2.4e-14 Score=135.65 Aligned_cols=120 Identities=12% Similarity=0.072 Sum_probs=96.7
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCC--cEEEEEcCccccc
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDS--QIEVYHKLLEDVE 263 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~--~i~~i~~d~~~~~ 263 (319)
.-.+.++..+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++..+++.+ +++++.+|+.+ .
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~ 287 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G 287 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c
Confidence 344566777777777899999999999999999964 56999999999 9999999999988643 68899999987 4
Q ss_pred cCCCceeEEEeccchhhhc--chhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 264 LPVESVDIIISEWMGYFLL--FETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++.++||+|++++++|... .......++.++.++|||||.+++..
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 5567999999999876421 12344578999999999999999854
No 105
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.53 E-value=2.9e-14 Score=125.92 Aligned_cols=118 Identities=14% Similarity=0.187 Sum_probs=94.8
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-- 263 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-- 263 (319)
...+.+...+...++.+|||+|||+|..+..+++. +..+|+++|+++ +++.|+++++..++.++++++.+|+.+..
T Consensus 58 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 58 LTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 33444444445556789999999999999999984 356999999999 99999999999998779999999997752
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
...++||+|+++.. ......+++.+.++|+|||+++++...+
T Consensus 138 ~~~~~fD~V~~~~~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA------KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp HTTSCEEEEEEETT------SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred hccCCccEEEEcCc------HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 22578999997643 2446779999999999999999865433
No 106
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=3.6e-14 Score=133.16 Aligned_cols=126 Identities=16% Similarity=0.057 Sum_probs=105.5
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
..+.+...++......++.+|||+|||+|.++..++..+ ..+++|+|+++ +++.|+++++..|+. +++++++|+.+
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~ 265 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARH 265 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhh
Confidence 346677777777888888999999999999999999853 46999999999 999999999999986 89999999999
Q ss_pred cccCCCceeEEEeccchhhhcc-----hhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 262 VELPVESVDIIISEWMGYFLLF-----ETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~-----~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++.+.+.||+|++|+++..... ......++..+.++|+|||.+++.+++.
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 8877678999999988653222 1234788999999999999999887764
No 107
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.53 E-value=6.5e-15 Score=123.08 Aligned_cols=101 Identities=21% Similarity=0.198 Sum_probs=86.0
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEec
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISE 275 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~ 275 (319)
+...++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.++++ .++++++.+| .+++.++||+|++.
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILFA 82 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEEE
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEEc
Confidence 4456778999999999999999999865 999999999 88888876 2588999998 55667899999998
Q ss_pred cchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+.+++ .+...+++++.++|||||++++....
T Consensus 83 ~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 83 NSFHDM---DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp SCSTTC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cchhcc---cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 877665 46789999999999999999987544
No 108
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=2.8e-14 Score=125.48 Aligned_cols=122 Identities=13% Similarity=0.215 Sum_probs=97.0
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCC-CcEEEEEcCcc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYD-SQIEVYHKLLE 260 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~-~~i~~i~~d~~ 260 (319)
....+...+....+..++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++. ++++++.+|+.
T Consensus 40 ~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~ 119 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH
T ss_pred HHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH
Confidence 34455555555444444559999999999999999984 2 56999999999 999999999999987 79999999987
Q ss_pred ccc--cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 261 DVE--LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 261 ~~~--~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
+.. ++.++||+|+++... .....+++.+.++|+|||+++++...+.
T Consensus 120 ~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 120 DVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp HHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred HHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 753 335799999987532 3456789999999999999999876653
No 109
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.53 E-value=1.8e-14 Score=124.67 Aligned_cols=98 Identities=19% Similarity=0.236 Sum_probs=84.2
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchh
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGY 279 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~ 279 (319)
++.+|||+|||+|.++..+ +..+++|+|+|+ +++.++++. .+++++.+|+.+++++.++||+|++..+.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 106 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTLE 106 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCTT
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChhh
Confidence 6789999999999998877 445999999999 988888765 468899999999888778999999987766
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++ .++..+++++.++|||||.+++....
T Consensus 107 ~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 107 FV---EDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp TC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hc---CCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 65 46789999999999999999987644
No 110
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.53 E-value=2.7e-14 Score=128.50 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=97.6
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CC-CEEEEEecHH-------HHHHHHHHHHhcCCCCcEEEEEc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSD-------IAYETIDIIRKNKYDSQIEVYHK 257 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~gvD~s~-------~i~~a~~~~~~~g~~~~i~~i~~ 257 (319)
......++..+...++.+|||+|||+|.++..+++. |. .+|+|+|+|+ +++.+++++...++.++++++.+
T Consensus 29 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 29 TAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 445566667777788899999999999999999986 33 6999999997 68999999988887778999999
Q ss_pred C---ccccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 258 L---LEDVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 258 d---~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
| ....+++.++||+|++..+.+++.. ...+++.+.++++|||++++...+
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEEec
Confidence 8 4445566789999999888777643 345777777788889999986544
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=2.2e-15 Score=129.96 Aligned_cols=124 Identities=15% Similarity=-0.043 Sum_probs=81.5
Q ss_pred cccHHHHHHHHhccccc-CCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCc
Q psy8709 183 PIRTESYKSAILNNKSL-FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLL 259 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~-~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~ 259 (319)
++.++.+.+.+++.+.. .++.+|||+|||+|.++..+++.+ ..+++|+|+++ +++.+++++..++. +++++++|+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 88 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADG 88 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcch
Confidence 34557777788777765 677899999999999999999964 44999999999 99999999888776 789999999
Q ss_pred cccccCC-----CceeEEEeccchhhhcch-----------------------hhHHHHHHHHhcccCCCcE-EEeecC
Q psy8709 260 EDVELPV-----ESVDIIISEWMGYFLLFE-----------------------TMIDSVIDARNRFLKPDGV-VCPNRF 309 (319)
Q Consensus 260 ~~~~~~~-----~~fD~Iis~~~~~~l~~~-----------------------~~~~~~l~~~~r~LkpgG~-li~~~~ 309 (319)
.+ +++. ++||+|+++++++..... ..+..+++++.++|||||+ +++...
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 87 4444 799999999876432110 1127888999999999999 666543
No 112
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.52 E-value=3.2e-14 Score=124.13 Aligned_cols=108 Identities=10% Similarity=0.130 Sum_probs=87.8
Q ss_pred CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCCceeEEEecc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVESVDIIISEW 276 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~~fD~Iis~~ 276 (319)
++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++..+++ .+++++.+|+.+++ ++.++||.|+++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4578999999999999999885 456999999999 99999999998887 68999999998865 5667899998765
Q ss_pred chhhhcch-----hhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 277 MGYFLLFE-----TMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 277 ~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+..|.... -....++.++.++|||||.+++.+.
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 43322110 0136789999999999999998763
No 113
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.52 E-value=2.7e-14 Score=128.65 Aligned_cols=116 Identities=13% Similarity=0.068 Sum_probs=87.3
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
..+.++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ |++.|++++..+. ....+...+........+
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAG 109 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTT
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCC
Confidence 455666777788889999999999999999999875 999999999 9999998876541 122222222200111246
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+||+|+++.+.+++.. .....++.++.++| |||+++++..
T Consensus 110 ~fD~Vv~~~~l~~~~~-~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTT-EEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCSEEEEESCGGGSCH-HHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CccEEEEhhhhHhCCH-HHHHHHHHHHHHhC-cCcEEEEEec
Confidence 8999999888776543 56778999999999 9999998754
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.52 E-value=4.3e-14 Score=126.51 Aligned_cols=103 Identities=11% Similarity=0.050 Sum_probs=87.7
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC---CCceeEEE
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP---VESVDIII 273 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~---~~~fD~Ii 273 (319)
..++.+|||+|||+|..+..++.. +..+|+++|+++ +++.++++++.+++ .+++++++|++++... .++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l-~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL-KGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEECcHHHhhcccccCCCceEEE
Confidence 345689999999999999999885 567999999999 99999999999998 4699999999887642 37899999
Q ss_pred eccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 274 SEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 274 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+..+ ..+..++..+.++|||||++++-.+
T Consensus 157 s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 157 ARAV-------APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EESS-------CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ECCc-------CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8654 3457889999999999999987544
No 115
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.52 E-value=1.9e-14 Score=128.27 Aligned_cols=123 Identities=9% Similarity=-0.008 Sum_probs=93.7
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHc---CCCEEEEEecHH-HHHHHHHHHHhc---CCCCc---------
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA---GAAKVFAIEKSD-IAYETIDIIRKN---KYDSQ--------- 251 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~---g~~~V~gvD~s~-~i~~a~~~~~~~---g~~~~--------- 251 (319)
.+.+.++..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++..+ ++..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 45555555554446679999999999999998875 345899999999 999999888765 44222
Q ss_pred ----------------EE-------------EEEcCcccccc-----CCCceeEEEeccchhhhcc------hhhHHHHH
Q psy8709 252 ----------------IE-------------VYHKLLEDVEL-----PVESVDIIISEWMGYFLLF------ETMIDSVI 291 (319)
Q Consensus 252 ----------------i~-------------~i~~d~~~~~~-----~~~~fD~Iis~~~~~~l~~------~~~~~~~l 291 (319)
++ ++++|+.+... +..+||+|++++++..... ......++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 66 99999887432 3348999999987654432 35677899
Q ss_pred HHHhcccCCCcEEEeecCc
Q psy8709 292 DARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 292 ~~~~r~LkpgG~li~~~~t 310 (319)
.++.++|+|||++++...+
T Consensus 198 ~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 198 RSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHSCTTCEEEEEESS
T ss_pred HHHHHhcCCCcEEEEeCcc
Confidence 9999999999999985433
No 116
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=6.3e-14 Score=127.83 Aligned_cols=127 Identities=18% Similarity=0.106 Sum_probs=100.8
Q ss_pred CcccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 182 TPIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 182 ~~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
.++.++.+.+.+++.+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|++++..+++.++++++++|+.
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 34566778888777665556679999999999999999887556999999999 99999999999998767999999998
Q ss_pred ccccCCCce---eEEEeccchhhhc--------chhh--------HHHHHHHHh-cccCCCcEEEeecCc
Q psy8709 261 DVELPVESV---DIIISEWMGYFLL--------FETM--------IDSVIDARN-RFLKPDGVVCPNRFT 310 (319)
Q Consensus 261 ~~~~~~~~f---D~Iis~~~~~~l~--------~~~~--------~~~~l~~~~-r~LkpgG~li~~~~t 310 (319)
+. ++ ++| |+|++|+++.... ++.. ...+++++. +.|+|||.+++....
T Consensus 184 ~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 184 EP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred hh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 73 33 478 9999997754221 1111 126789999 999999999987654
No 117
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.52 E-value=2.6e-14 Score=133.19 Aligned_cols=121 Identities=16% Similarity=0.029 Sum_probs=95.0
Q ss_pred HHHHHHHhcccc-cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCC-cEEEEEcCccccc
Q psy8709 187 ESYKSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDS-QIEVYHKLLEDVE 263 (319)
Q Consensus 187 ~~~~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~-~i~~i~~d~~~~~ 263 (319)
....+++...+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+ +++.|++++..+++.+ +++++++|+.+..
T Consensus 138 ~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 138 IVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 334444444443 34567999999999999999999877 999999999 9999999999998855 5999999998753
Q ss_pred cC----CCceeEEEeccchhhhc-------chhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 264 LP----VESVDIIISEWMGYFLL-------FETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 264 ~~----~~~fD~Iis~~~~~~l~-------~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
.. .++||+|+++++.+... ....+..++..+.++|+|||++++..
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 21 46899999998754321 23467889999999999999966543
No 118
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=6e-14 Score=123.23 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=86.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEe-ccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIIS-EWM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis-~~~ 277 (319)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++. .+++++.+|+.+.++ .++||+|+| ...
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~ 110 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-GRKFSAVVSMFSS 110 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-SSCEEEEEECTTG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-CCCCcEEEEcCch
Confidence 4568999999999999999999765 999999999 998887753 468999999998776 478999995 436
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.+++........+++++.++|+|||.++++..
T Consensus 111 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 111 VGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp GGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 66666667788999999999999999998754
No 119
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=8.1e-14 Score=121.51 Aligned_cols=103 Identities=20% Similarity=0.231 Sum_probs=81.6
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc----ccCCCcee
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV----ELPVESVD 270 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~----~~~~~~fD 270 (319)
+...++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.+.+..+.. .++.++.+|+... +++ ++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-ccee
Confidence 44567789999999999999998885 446999999999 887777766543 4788999998764 334 7899
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+|+++.. .......++.+++++|||||++++..
T Consensus 129 ~V~~~~~-----~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIA-----QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecc-----ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999742 22345566899999999999999873
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=6.1e-14 Score=123.51 Aligned_cols=110 Identities=22% Similarity=0.252 Sum_probs=89.3
Q ss_pred HHHHH---hcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc--
Q psy8709 189 YKSAI---LNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED-- 261 (319)
Q Consensus 189 ~~~~i---~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~-- 261 (319)
+...+ +..+...++.+|||+|||+|.++..+++. |..+|+|+|+|+ +++.++++++.+ .++.++.+|+.+
T Consensus 59 ~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~ 135 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQ 135 (230)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGG
T ss_pred HHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcc
Confidence 33566 55566677889999999999999999986 557999999999 999998887654 689999999987
Q ss_pred --cccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 262 --VELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 262 --~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
.+++ ++||+|+.+. ........++.++.++|||||++++.
T Consensus 136 ~~~~~~-~~~D~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 136 EYANIV-EKVDVIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp GGTTTS-CCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccC-ccEEEEEEec-----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 5555 7899999442 22234577899999999999999985
No 121
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=6.1e-14 Score=133.30 Aligned_cols=114 Identities=16% Similarity=0.132 Sum_probs=94.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCC-cEEEEEcCccccc--c--CCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDS-QIEVYHKLLEDVE--L--PVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~-~i~~i~~d~~~~~--~--~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++.++.+|+|+|+|+ +++.|+++++.+++.+ +++++++|+.+.. . ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 46789999999999999999998777999999999 9999999999999865 8999999997642 1 235899999
Q ss_pred eccchhh------hcchhhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 274 SEWMGYF------LLFETMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 274 s~~~~~~------l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
++++.+. ......+..++..+.++|+|||++++++++..+
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 9987631 112344667888999999999999999887654
No 122
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.50 E-value=1e-13 Score=123.78 Aligned_cols=109 Identities=13% Similarity=0.185 Sum_probs=90.5
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-cc-C-CCceeE
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-EL-P-VESVDI 271 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~~-~-~~~fD~ 271 (319)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +. . .++||+
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 3446689999999999999999985 3 56999999999 9999999999999977999999999763 22 1 248999
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
|+++.. ......++.++.++|||||+++++.+...
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 140 IFIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EEECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 998653 24556789999999999999998876543
No 123
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.50 E-value=4.3e-14 Score=128.13 Aligned_cols=116 Identities=15% Similarity=0.073 Sum_probs=94.3
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc----CCCce
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL----PVESV 269 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~----~~~~f 269 (319)
+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++..++ .+++++.+|+.++.. +.++|
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-LNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-CcEEEEeCChHhcchhhhhccccC
Confidence 34567789999999999999999883 447999999999 99999999999988 489999999987654 24789
Q ss_pred eEEEeccchhhhc---------------chhhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 270 DIIISEWMGYFLL---------------FETMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 270 D~Iis~~~~~~l~---------------~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
|+|+++++...+. .......++..+.++|||||.+++++|++..
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 9999986543221 0133578899999999999999999998753
No 124
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.50 E-value=4.8e-14 Score=128.26 Aligned_cols=108 Identities=12% Similarity=0.123 Sum_probs=82.3
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc-----------------CCC------------
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN-----------------KYD------------ 249 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~-----------------g~~------------ 249 (319)
.++.+|||+|||+|.++..++..+..+|+|+|+|+ |++.|+++++.. +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 36689999999999966555554455999999999 999988765432 100
Q ss_pred CcEEEEEcCccc-cc-----cCCCceeEEEeccchhhhcc-hhhHHHHHHHHhcccCCCcEEEee
Q psy8709 250 SQIEVYHKLLED-VE-----LPVESVDIIISEWMGYFLLF-ETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 250 ~~i~~i~~d~~~-~~-----~~~~~fD~Iis~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
..+.++.+|+.+ .+ ++.++||+|+++.+++++.. ..++..+++++.++|||||+|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 025677889877 44 33457999999988877543 357889999999999999999986
No 125
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.50 E-value=6.9e-14 Score=122.71 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=92.8
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
....+...+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.++++....+ +++++.+|+.+..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGY 129 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccc
Confidence 345566677777777788899999999999999999986 6999999999 9999999887665 7999999998733
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.+.++||+|++..+.+++. .++.++|+|||++++...+.
T Consensus 130 ~~~~~fD~v~~~~~~~~~~---------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL---------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH---------HHHHHHcCCCcEEEEEEcCC
Confidence 3357899999987765542 35778999999999876653
No 126
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=5.9e-14 Score=125.73 Aligned_cols=110 Identities=21% Similarity=0.258 Sum_probs=87.0
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
.+.+...+. ++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++.. .+ ++.+|+.+++++.++
T Consensus 45 ~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~ 114 (260)
T 2avn_A 45 GSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGA 114 (260)
T ss_dssp HHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTC
T ss_pred HHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCC
Confidence 334443333 668999999999999999999865 999999999 9988887643 12 889999988887789
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
||+|++.....++. .++..+++++.++|||||.+++...+.
T Consensus 115 fD~v~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 115 FEAVLALGDVLSYV--ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEEECSSHHHHC--SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEEEcchhhhcc--ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 99999875433332 237899999999999999999876554
No 127
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.49 E-value=2.1e-13 Score=120.20 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=87.1
Q ss_pred hcccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc---ccCCC
Q psy8709 194 LNNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV---ELPVE 267 (319)
Q Consensus 194 ~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~---~~~~~ 267 (319)
+..+...++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.+.++++.+ .+++++.+|+.+. +.+.+
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 44556777889999999999999999986 346999999999 888888888776 5899999999873 34457
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+||+|+++.+ .......++.++.++|||||+++++.
T Consensus 147 ~~D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 147 MVDVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8999999765 22344567888999999999999853
No 128
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=6.4e-14 Score=122.41 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=89.6
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCC----Cc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPV----ES 268 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~----~~ 268 (319)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.++++++..++.++++++.+|+.+.. ++. ++
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 3445689999999999999999985 3 56999999999 99999999999998778999999996542 211 68
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
||+|+++.. ......++..+.++|+|||+++++...+
T Consensus 141 fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 141 YDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 999997654 2456778999999999999999876654
No 129
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.49 E-value=7e-14 Score=129.35 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=94.5
Q ss_pred ccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEE
Q psy8709 196 NKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDII 272 (319)
Q Consensus 196 ~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~I 272 (319)
.+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+++ .+++++++|+.+++...++||+|
T Consensus 113 ~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 113 ALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp HHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSCGGGGGGGCCCEEEE
T ss_pred HhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CeEEEEECChhhcccccccCCEE
Confidence 345667889999999999999999984 346999999999 99999999999888 47999999998876545789999
Q ss_pred Eeccchhhh---cch----------------hhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 273 ISEWMGYFL---LFE----------------TMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 273 is~~~~~~l---~~~----------------~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
+++++.... ... .....++.++.++|||||++++++|++..
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~ 251 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP 251 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh
Confidence 997653211 110 11258899999999999999999998753
No 130
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.49 E-value=5.9e-14 Score=125.22 Aligned_cols=111 Identities=15% Similarity=0.180 Sum_probs=89.4
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC----------------------------
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY---------------------------- 248 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~---------------------------- 248 (319)
...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4456689999999999999998887666999999999 99999888765421
Q ss_pred CCcE-EEEEcCcccccc-CC---CceeEEEeccchhhhc-chhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 249 DSQI-EVYHKLLEDVEL-PV---ESVDIIISEWMGYFLL-FETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 249 ~~~i-~~i~~d~~~~~~-~~---~~fD~Iis~~~~~~l~-~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
..++ .++.+|+.+... +. ++||+|++..+.+++. +...+..++.++.++|||||++++..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 0127 899999987643 44 7899999988776443 34578899999999999999999865
No 131
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=9.4e-14 Score=122.31 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=94.6
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-cc
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-EL 264 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~~ 264 (319)
.....+...+...++.+|||+|||+|..+..+++. +..+|+++|+++ +++.|++++...+..++++++.+|+.+. +.
T Consensus 41 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 41 LGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 33444444445556789999999999999999985 356999999999 9999999999988877899999999874 32
Q ss_pred C--CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 P--VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~--~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
. .++||+|+++... .....++..+.++|+|||+++++...
T Consensus 121 ~~~~~~fD~I~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK------GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HTTSCCEEEEEEEGGG------SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred cccCCCccEEEECCCH------HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 2 4789999987652 35678899999999999999998543
No 132
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.49 E-value=1.1e-13 Score=120.73 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=90.0
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cC---CCce
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LP---VESV 269 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~---~~~f 269 (319)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+.. ++ .++|
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 3456689999999999999999986 2 45999999999 99999999999998778999999997642 11 1579
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
|+|+++... .....++..+.++|+|||+++++.....
T Consensus 135 D~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 135 DFIFIDADK------QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp SEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred CEEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 999987652 3456889999999999999998766543
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=8.9e-14 Score=128.61 Aligned_cols=115 Identities=15% Similarity=0.013 Sum_probs=95.0
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
..+...++..+...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++ .+++++.+|+.+..
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-ENVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEECChhhcc
Confidence 4556667777777888999999999999999999863 25799999999 99999999999888 45999999998855
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.+.++||+|++..+.+++. ..+.+.|||||+++++..+.
T Consensus 140 ~~~~~fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 140 PEFSPYDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp GGGCCEEEEEECSBBSCCC---------HHHHHHEEEEEEEEEEBCBG
T ss_pred ccCCCeEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEECCC
Confidence 4457899999988766542 45678999999999886654
No 134
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=1.1e-13 Score=117.13 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=86.1
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEec-cc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISE-WM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~-~~ 277 (319)
.++.+|||+|||+|.++..+++.+. +++|+|+++ +++.++++. .+++++.+|+.+.+++.++||+|+++ ..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNV 117 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcH
Confidence 4568999999999999999999865 999999999 888887654 35889999999887777899999997 45
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+++ ..+....++.++.++|+|||.+++...+
T Consensus 118 ~~~~-~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 118 MGFL-AEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp GGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred Hhhc-ChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5443 4466789999999999999999986543
No 135
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1e-13 Score=120.26 Aligned_cols=115 Identities=19% Similarity=0.124 Sum_probs=92.4
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA--AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV 262 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~ 262 (319)
...+...+...+...++.+|||+|||+|.++..+++.+. .+|+++|+++ +++.+++++...+. .+++++.+|+...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLG 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGC
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccC
Confidence 345556666667777889999999999999999998642 6999999999 99999999988877 5699999998653
Q ss_pred ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 263 ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 263 ~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
....++||+|++....+++. .++.++|||||.+++...+
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCCCeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 33257899999987765442 3678899999999987654
No 136
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=8.2e-14 Score=126.50 Aligned_cols=124 Identities=20% Similarity=0.196 Sum_probs=96.5
Q ss_pred EEeeecCCCcccHHHH--HHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCC
Q psy8709 174 VFAIEKSGTPIRTESY--KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDS 250 (319)
Q Consensus 174 V~avd~d~~~~~~~~~--~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~ 250 (319)
.+.+|.....+..... ...+.+. ..++.+|||+|||+|.+++.+++.|.++|+++|+++ +++.+++|++.|++.+
T Consensus 98 ~~~~D~~k~~f~~~~~~er~ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~ 175 (278)
T 3k6r_A 98 KYKLDVAKIMFSPANVKERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVED 175 (278)
T ss_dssp EEEEETTTSCCCGGGHHHHHHHHHH--CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTT
T ss_pred EEEEeccceEEcCCcHHHHHHHHHh--cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 3455555555554333 2333332 356789999999999999999999888999999999 9999999999999999
Q ss_pred cEEEEEcCccccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 251 QIEVYHKLLEDVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 251 ~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
+++++++|+.++.. .+.||.|+++.+... ..++..+.++|||||.+.+.
T Consensus 176 ~v~~~~~D~~~~~~-~~~~D~Vi~~~p~~~-------~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 176 RMSAYNMDNRDFPG-ENIADRILMGYVVRT-------HEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp TEEEECSCTTTCCC-CSCEEEEEECCCSSG-------GGGHHHHHHHEEEEEEEEEE
T ss_pred cEEEEeCcHHHhcc-ccCCCEEEECCCCcH-------HHHHHHHHHHcCCCCEEEEE
Confidence 99999999988754 478999999876432 23556667899999998653
No 137
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=9.1e-14 Score=123.86 Aligned_cols=113 Identities=20% Similarity=0.339 Sum_probs=95.0
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
....+...+...++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|+++++.+++.++++++.+|+.+. ++
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IE 159 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CC
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cC
Confidence 3446666777888899999999999999999986 4 56999999999 9999999999999866799999999865 56
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.++||+|+++++ ....++.++.++|+|||.+++...+
T Consensus 160 ~~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 160 EENVDHVILDLP--------QPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp CCSEEEEEECSS--------CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCcCEEEECCC--------CHHHHHHHHHHHcCCCCEEEEEECC
Confidence 678999998654 2246788899999999999976543
No 138
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.48 E-value=8.9e-14 Score=124.67 Aligned_cols=111 Identities=20% Similarity=0.310 Sum_probs=90.7
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
+....+.+... ..++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.+++++..++.. ++++.+|+.+. +
T Consensus 107 t~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~ 180 (254)
T 2nxc_A 107 TRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-L 180 (254)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-G
T ss_pred HHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-C
Confidence 33444444433 35678999999999999999999877 999999999 999999999998873 89999998763 4
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+.++||+|+++.+.+ .+..++..+.++|+|||+++++.
T Consensus 181 ~~~~fD~Vv~n~~~~------~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 181 PFGPFDLLVANLYAE------LHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp GGCCEEEEEEECCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCEEEECCcHH------HHHHHHHHHHHHcCCCCEEEEEe
Confidence 457899999986543 35688999999999999999864
No 139
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.48 E-value=1.5e-13 Score=121.25 Aligned_cols=105 Identities=18% Similarity=0.151 Sum_probs=90.2
Q ss_pred CCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
.++.+|+|+|||+|.++..+++.+ ..+|+|+|+++ +++.|+++++.+++.++++++.+|..+...+.++||+|+...+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 356899999999999999999975 56899999999 9999999999999988999999999886655447999887666
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+. ..+..++....+.|+++|+|+.+..
T Consensus 100 Gg-----~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 100 GG-----RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CH-----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch-----HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 43 4467889999999999999997764
No 140
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.48 E-value=1.6e-13 Score=120.83 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=88.3
Q ss_pred CCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|+++++.+++.++++++.+|..+.-.+.++||+|+...+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 356799999999999999999975 56899999999 9999999999999988899999999653222236999997666
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+. ..+..++......|+|+|+|+++..
T Consensus 94 Gg-----~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 94 GG-----RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CH-----HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred Ch-----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 43 3467899999999999999998765
No 141
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.48 E-value=1.1e-13 Score=129.32 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=95.6
Q ss_pred HHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA-AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
...+.+++.+...++.+|||+|||+|.++..+++.+. .+|+++|+|+ +++.+++++..++. .++++.+|+.+..
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC--
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc--
Confidence 3455666666555667999999999999999998753 4999999999 99999999998887 3677889987643
Q ss_pred CCceeEEEeccchhhhc--chhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEWMGYFLL--FETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.++||+|++++++|+.. .......+++++.++|||||.+++....
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 57899999998876421 2356789999999999999999976543
No 142
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=1.9e-13 Score=123.88 Aligned_cols=104 Identities=27% Similarity=0.275 Sum_probs=88.2
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
..++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|+++++.+++ .++.++.+|+.+.+. .++||+|++++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHcCc-cCCceEEEECC
Confidence 556789999999999999999986 456999999999 99999999999998 578999999988733 46899999987
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+. ....++..+.+.|+|||+++++....
T Consensus 195 p~-------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH-------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS-------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc-------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 74 33457788889999999999776543
No 143
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.48 E-value=1.6e-13 Score=139.11 Aligned_cols=123 Identities=10% Similarity=0.065 Sum_probs=101.4
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHhc------CCCCcEEEEE
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA--AKVFAIEKSD-IAYETIDIIRKN------KYDSQIEVYH 256 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~gvD~s~-~i~~a~~~~~~~------g~~~~i~~i~ 256 (319)
.....+++++.+...++.+|||+|||+|.++..+++.+. .+|+|+|+|+ +++.|++++... +. .++++++
T Consensus 706 ~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiq 784 (950)
T 3htx_A 706 SKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYD 784 (950)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEE
T ss_pred HHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEE
Confidence 355566677777667889999999999999999999762 5999999999 999998876532 44 5899999
Q ss_pred cCccccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 257 KLLEDVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 257 ~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+|+.+++++.++||+|++..+.+++.. .....+++++.++|||| .+++++++.
T Consensus 785 GDa~dLp~~d~sFDlVV~~eVLeHL~d-p~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 785 GSILEFDSRLHDVDIGTCLEVIEHMEE-DQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp SCTTSCCTTSCSCCEEEEESCGGGSCH-HHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred CchHhCCcccCCeeEEEEeCchhhCCh-HHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 999999888889999999888777643 44567999999999999 777776654
No 144
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=121.84 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=83.7
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh------cCCCCcEEEEEcCccc-cc--cCCCc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK------NKYDSQIEVYHKLLED-VE--LPVES 268 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~------~g~~~~i~~i~~d~~~-~~--~~~~~ 268 (319)
.++.+|||||||+|.++..+++. +...|+|+|+|+ +++.|+++++. .+. .++.++.+|+.+ ++ ++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 34568999999999999999985 456999999999 99999887654 344 689999999987 54 66789
Q ss_pred eeEEEeccchhhhcc--hh---hHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLF--ET---MIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~--~~---~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
||.|+++.+..|... .. ....++.++.++|||||.|++.+..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 999997654333211 00 0147899999999999999987653
No 145
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.47 E-value=4.5e-14 Score=122.69 Aligned_cols=111 Identities=19% Similarity=0.225 Sum_probs=87.9
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc---cc
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV---EL 264 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~---~~ 264 (319)
....++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++ .++.+..+++.++ +.
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc
Confidence 334455555556678999999999999999999865 999999999 88888765 3567888888776 33
Q ss_pred C-CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 P-VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~-~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+ ..+||+|++..+.+ ..++..+++++.++|||||++++.....
T Consensus 112 ~~~~~fD~v~~~~~l~----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 112 PVGKDYDLICANFALL----HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCCCCEEEEEEESCCC----SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ccCCCccEEEECchhh----hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 3 34599999987765 2566789999999999999999876543
No 146
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.47 E-value=2e-13 Score=121.35 Aligned_cols=105 Identities=21% Similarity=0.187 Sum_probs=89.8
Q ss_pred CCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|+++++.+++.+++++..+|..+...+.++||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 356799999999999999999975 55899999999 9999999999999988899999999876554346999987665
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+. ..+..++.+..+.|+++|+|+++..
T Consensus 100 Gg-----~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 100 GG-----TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp CH-----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch-----HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 43 4567889999999999999998764
No 147
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.47 E-value=3.5e-14 Score=126.71 Aligned_cols=122 Identities=11% Similarity=0.063 Sum_probs=85.7
Q ss_pred cHHHHHHHHhcccccC--CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 185 RTESYKSAILNNKSLF--NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~--~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
....+...++..+... ++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++..+++.++++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 3455555666555432 5679999999999999888874 346999999999 99999999999998777999999987
Q ss_pred cc---ccCC---CceeEEEeccchhhhcch------------hhHHHHHHHHhcccCCCcEEEe
Q psy8709 261 DV---ELPV---ESVDIIISEWMGYFLLFE------------TMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 261 ~~---~~~~---~~fD~Iis~~~~~~l~~~------------~~~~~~l~~~~r~LkpgG~li~ 306 (319)
+. +++. ++||+|+++++++....+ .....++.++.++|||||.+.+
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 62 3332 589999999887643200 0122456777888888887653
No 148
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=8.1e-14 Score=118.88 Aligned_cols=112 Identities=15% Similarity=0.077 Sum_probs=89.7
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
-+.+...+...+ .+..+|||+|||+|.++..++.. +..+|+|+|+|+ |++.+++++..+|...++++ .|....
T Consensus 36 ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~- 110 (200)
T 3fzg_A 36 LNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD- 110 (200)
T ss_dssp HHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-
T ss_pred HHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-
Confidence 366666666665 34679999999999999999884 445999999999 99999999999998667777 555544
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
.+.++||+|++..+.|++ +..+..+..+.+.|+|||++|
T Consensus 111 ~~~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 111 VYKGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp HTTSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEE
T ss_pred CCCCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEE
Confidence 345889999998888887 444556668999999999766
No 149
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.46 E-value=2.4e-14 Score=124.61 Aligned_cols=111 Identities=13% Similarity=0.018 Sum_probs=82.9
Q ss_pred ccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHH----hcCCCCcEEEEEcCccccccCCCce
Q psy8709 196 NKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIR----KNKYDSQIEVYHKLLEDVELPVESV 269 (319)
Q Consensus 196 ~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~----~~g~~~~i~~i~~d~~~~~~~~~~f 269 (319)
.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+ |++.+.+.++ ..+. ++++++++|+.+++++.+.
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-
Confidence 3345677899999999999999999963 56999999999 8886544433 3444 5899999999998877666
Q ss_pred eEEEeccchhhhc--chhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 270 DIIISEWMGYFLL--FETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 270 D~Iis~~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
|.|+......... +..+...+++++.++|||||.++++.
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7777433222111 22334789999999999999999854
No 150
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.46 E-value=1.1e-13 Score=131.78 Aligned_cols=114 Identities=20% Similarity=0.130 Sum_probs=95.7
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc----CCCceeEEEec
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL----PVESVDIIISE 275 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~----~~~~fD~Iis~ 275 (319)
++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++.++++++.+|+.+... +.++||+|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 6789999999999999999998777999999999 999999999999986589999999977532 24689999999
Q ss_pred cchhhhc------chhhHHHHHHHHhcccCCCcEEEeecCcceee
Q psy8709 276 WMGYFLL------FETMIDSVIDARNRFLKPDGVVCPNRFTLSLC 314 (319)
Q Consensus 276 ~~~~~l~------~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~ 314 (319)
++.+... .......++..+.++|+|||.+++.+|+....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 341 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD 341 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC
Confidence 8753211 12456788999999999999999998876543
No 151
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.46 E-value=2.3e-13 Score=129.70 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=96.3
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC-CCcEEEEEcCcccccc----CCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY-DSQIEVYHKLLEDVEL----PVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~-~~~i~~i~~d~~~~~~----~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++.|+.+|+|+|+++ +++.|+++++.+++ .++++++.+|+.+... ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999999998877999999999 99999999999998 6689999999987532 146899999
Q ss_pred eccchhhh------cchhhHHHHHHHHhcccCCCcEEEeecCcceee
Q psy8709 274 SEWMGYFL------LFETMIDSVIDARNRFLKPDGVVCPNRFTLSLC 314 (319)
Q Consensus 274 s~~~~~~l------~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~ 314 (319)
++++.+.. .....+..++..+.+.|+|||++++++++..+.
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 345 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT 345 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC
Confidence 99875321 112457788999999999999999998876543
No 152
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=1.6e-13 Score=125.10 Aligned_cols=105 Identities=11% Similarity=0.152 Sum_probs=79.8
Q ss_pred CCCcceeeccCCCchHHHHHH----H-cCCCEE--EEEecHH-HHHHHHHHHHhc-CCCCcEE--EEEcCccccc-----
Q psy8709 200 FNNKHVIDVGAGTGILSIFAA----Q-AGAAKV--FAIEKSD-IAYETIDIIRKN-KYDSQIE--VYHKLLEDVE----- 263 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la----~-~g~~~V--~gvD~s~-~i~~a~~~~~~~-g~~~~i~--~i~~d~~~~~----- 263 (319)
.++.+|||||||+|.++..++ . .+...| +|+|+|+ |++.|++++... ++ .++. +..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 456799999999997765332 2 233444 9999999 999999988754 33 4454 4566665543
Q ss_pred -cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 264 -LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 264 -~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+++++||+|++..+.|++ .++..++++++++|||||++++..
T Consensus 130 ~~~~~~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYV---KDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGC---SCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeec---CCHHHHHHHHHHHcCCCcEEEEEE
Confidence 356899999998888877 667899999999999999999753
No 153
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.46 E-value=4.2e-14 Score=125.96 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=90.1
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC------CCc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP------VES 268 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~------~~~ 268 (319)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+.... .++
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 3445689999999999999999984 2 56999999999 9999999999999978999999999765321 378
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
||+|+++.. ......+++.+.++|+|||+++++...+
T Consensus 137 fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 137 FDFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EEEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EeEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 999998654 2456678999999999999999876554
No 154
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.45 E-value=4.7e-13 Score=121.69 Aligned_cols=120 Identities=20% Similarity=0.243 Sum_probs=90.6
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEec-HH-HHHHHHHHH-----HhcCCC----CcEE
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEK-SD-IAYETIDII-----RKNKYD----SQIE 253 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~-s~-~i~~a~~~~-----~~~g~~----~~i~ 253 (319)
.+..+.+++.......++.+|||+|||+|.++..+++.+..+|+|+|+ ++ +++.+++++ +.+++. ++++
T Consensus 63 ~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 456677777777666778899999999999999999987779999999 79 999999999 555543 4788
Q ss_pred EEEcCcccc--cc----CCCceeEEEeccchhhhcchhhHHHHHHHHhcccC---C--CcEEEee
Q psy8709 254 VYHKLLEDV--EL----PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLK---P--DGVVCPN 307 (319)
Q Consensus 254 ~i~~d~~~~--~~----~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~Lk---p--gG~li~~ 307 (319)
+...+..+. .+ +.++||+|++..+.++ ......++..+.++|+ | ||.+++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 886665432 11 3578999998555443 3678889999999999 9 9976653
No 155
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=8.4e-14 Score=123.24 Aligned_cols=105 Identities=12% Similarity=-0.031 Sum_probs=86.6
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCC-----CceeEE
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPV-----ESVDII 272 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~-----~~fD~I 272 (319)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++.. ..+++++++|+.+.+.+. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 45668999999999999999999876 999999999 9999987762 248999999998865431 249999
Q ss_pred EeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 273 ISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 273 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+++.+.+++.. .....+++++.++|||||++++...
T Consensus 129 ~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 129 YMRTGFHHIPV-EKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp EEESSSTTSCG-GGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred EEcchhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99988877633 5678999999999999999776543
No 156
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.45 E-value=1.7e-13 Score=118.65 Aligned_cols=105 Identities=16% Similarity=0.153 Sum_probs=87.0
Q ss_pred CCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-ccCCCceeEEEec
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-ELPVESVDIIISE 275 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~~~~~~fD~Iis~ 275 (319)
.++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+. +...+ ||+|+++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35579999999999999999985 3 46999999999 9999999999888877899999999764 33335 9999986
Q ss_pred cchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.. ......+++++.++|+|||+++++...+
T Consensus 134 ~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 134 CD------VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TT------TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred CC------hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 42 1456788999999999999999876543
No 157
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=1.7e-13 Score=124.11 Aligned_cols=110 Identities=15% Similarity=0.210 Sum_probs=89.5
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhc-CCCCcEEEEEcCccccccCCC
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKN-KYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~-g~~~~i~~i~~d~~~~~~~~~ 267 (319)
.+...+...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.+++++..+ +. ++++++.+|+.+ .++.+
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCSC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcCC
Confidence 4555667778889999999999999999986 356999999999 999999999887 75 689999999987 45567
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+||+|+++.+ ....+++++.++|||||++++..++.
T Consensus 179 ~fD~Vi~~~~--------~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 179 MYDAVIADIP--------DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CEEEEEECCS--------CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CccEEEEcCc--------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 8999998543 23578889999999999999887764
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.45 E-value=2.6e-13 Score=120.73 Aligned_cols=112 Identities=23% Similarity=0.246 Sum_probs=94.0
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhc-CCCCcEEEEEcCccccccCC
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKN-KYDSQIEVYHKLLEDVELPV 266 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~-g~~~~i~~i~~d~~~~~~~~ 266 (319)
..++..+...++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.+++++..+ + .++++++.+|+.+.+++.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 45666667788899999999999999999986 4 56999999999 999999999887 7 478999999999876776
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++||+|++++. ....++.++.++|+|||.+++...+.
T Consensus 165 ~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 165 AAYDGVALDLM--------EPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp TCEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCcCEEEECCc--------CHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 78999998543 23467888999999999999876553
No 159
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.45 E-value=4.3e-13 Score=121.66 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=87.4
Q ss_pred CCcceeeccCCC---chHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-----------c
Q psy8709 201 NNKHVIDVGAGT---GILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-----------L 264 (319)
Q Consensus 201 ~~~~VLDiGcGt---G~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-----------~ 264 (319)
...+|||+|||+ |.++..+.+. +..+|+++|+|+ |++.|++++... .+++++.+|+.+.. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 347999999999 9887766663 446999999999 999999887432 58999999997632 3
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+..+||+|+++.++|++..+ ....+++++.+.|+|||+|+++..+.
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 33589999999988887554 68899999999999999999887653
No 160
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.45 E-value=1.6e-13 Score=121.44 Aligned_cols=113 Identities=13% Similarity=0.175 Sum_probs=90.0
Q ss_pred HHHHHHHh---cccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 187 ESYKSAIL---NNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 187 ~~~~~~i~---~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
.++...++ ..+.+.+|.+|||+|||+|.++..+++. +.++|+|+|+++ |++.+++++... .++..+.+|..
T Consensus 60 sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~ 136 (233)
T 4df3_A 60 SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDAR 136 (233)
T ss_dssp CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTT
T ss_pred hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEecc
Confidence 34444554 3467899999999999999999999984 457999999999 999998876554 57888988886
Q ss_pred cc---ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 261 DV---ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 261 ~~---~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
.. +...+++|+|++....+ .....++.++.+.|||||.+++.
T Consensus 137 ~p~~~~~~~~~vDvVf~d~~~~-----~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 137 FPEKYRHLVEGVDGLYADVAQP-----EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CGGGGTTTCCCEEEEEECCCCT-----THHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccccceEEEEEEeccCC-----hhHHHHHHHHHHhccCCCEEEEE
Confidence 54 34467899999865422 45678899999999999999875
No 161
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.45 E-value=5.6e-13 Score=123.71 Aligned_cols=114 Identities=15% Similarity=-0.000 Sum_probs=93.9
Q ss_pred HhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCcee
Q psy8709 193 ILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVD 270 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD 270 (319)
+...++..+..+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+. .++|. +||
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D 237 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAG 237 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCS
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCc
Confidence 344445555679999999999999999884 5569999999 7 99999999998888789999999997 35554 899
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+|++..+.|++.. +....+++++++.|+|||++++....
T Consensus 238 ~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 238 GYVLSAVLHDWDD-LSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp EEEEESCGGGSCH-HHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred EEEEehhhccCCH-HHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 9999888776533 44688999999999999999976543
No 162
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.44 E-value=7.3e-13 Score=122.64 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=95.6
Q ss_pred HHhccccc--CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 192 AILNNKSL--FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 192 ~i~~~l~~--~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
.++..++. .++.+|||+|||+|.++..+++. +..+++++|++.+++.+++++...++.++++++.+|+.+.+++ +.
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 232 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYG-ND 232 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-SC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCC-CC
Confidence 44444555 66789999999999999999885 4559999999998999999998888877899999999887666 34
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
||+|++..+.|++ .......+++++.+.|+|||++++....
T Consensus 233 ~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 233 YDLVLLPNFLHHF-DVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcEEEEcchhccC-CHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 9999997776654 3355678999999999999988865543
No 163
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=4.8e-13 Score=117.15 Aligned_cols=113 Identities=25% Similarity=0.288 Sum_probs=88.8
Q ss_pred HHHHHHH---hcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy8709 187 ESYKSAI---LNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLE 260 (319)
Q Consensus 187 ~~~~~~i---~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~ 260 (319)
..+...+ +..+...++.+|||+|||+|.++..+++. + ..+|+|+|+++ +++.+.++++.+ .+++++.+|+.
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~ 132 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDAT 132 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTT
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCC
Confidence 4445666 44455777889999999999999999985 3 36999999999 999998887655 58999999998
Q ss_pred ccc---cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 261 DVE---LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 261 ~~~---~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
+.. ...++||+|+++.+ .......++.++.++|||||.+++.
T Consensus 133 ~~~~~~~~~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 133 KPEEYRALVPKVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CGGGGTTTCCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcchhhcccCCceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 742 12368999998765 2233445699999999999999986
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.44 E-value=3.7e-13 Score=117.70 Aligned_cols=113 Identities=21% Similarity=0.202 Sum_probs=88.8
Q ss_pred HHHHhcccc--cCCCcceeeccCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHhcCC----CCcEEEEEcCcc
Q psy8709 190 KSAILNNKS--LFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSD-IAYETIDIIRKNKY----DSQIEVYHKLLE 260 (319)
Q Consensus 190 ~~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~gvD~s~-~i~~a~~~~~~~g~----~~~i~~i~~d~~ 260 (319)
...++..+. ..++.+|||+|||+|.++..+++. +. .+|+++|+++ +++.+++++...+. .++++++.+|+.
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 334444443 567789999999999999999885 33 5999999999 99999999887654 368999999998
Q ss_pred ccccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 261 DVELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 261 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
....+.++||+|+++.+.+. ++.++.++|||||+++++.++.
T Consensus 144 ~~~~~~~~fD~i~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 144 MGYAEEAPYDAIHVGAAAPV---------VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GCCGGGCCEEEEEECSBBSS---------CCHHHHHTEEEEEEEEEEESCT
T ss_pred cCcccCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEEecC
Confidence 66555578999998776432 2356788999999999987764
No 165
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.44 E-value=4.7e-13 Score=128.52 Aligned_cols=117 Identities=16% Similarity=0.153 Sum_probs=92.2
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHH-------HHHHHhcCCC-CcEEEEE
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYET-------IDIIRKNKYD-SQIEVYH 256 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a-------~~~~~~~g~~-~~i~~i~ 256 (319)
..+...++..+...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.| ++++...|+. .+++++.
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 345556666677778899999999999999999984 667899999999 99888 8888888853 6899999
Q ss_pred cCcccc--cc--CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 257 KLLEDV--EL--PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 257 ~d~~~~--~~--~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
+|.... ++ ..++||+|+++...+ ...+..+|.++.+.|||||.+++.
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l~----~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFLF----DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTTC----CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cCccccccccccccCCCCEEEEeCccc----cccHHHHHHHHHHhCCCCeEEEEe
Confidence 764421 11 236899999865431 256778899999999999999976
No 166
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.44 E-value=2.4e-13 Score=118.30 Aligned_cols=106 Identities=22% Similarity=0.218 Sum_probs=85.2
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc--cccCCCc
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED--VELPVES 268 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~--~~~~~~~ 268 (319)
.+...+. .++.+|||+|||+|.++..+++.+ .+++|+|+++ +++.++++. .+++.+|+.+ .+++.++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 4444444 567899999999999999999986 6999999999 877776432 2688899876 4556689
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
||+|++..+.+++ .+...++.++.++|+|||.++++..+
T Consensus 94 fD~v~~~~~l~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 94 FDCVIFGDVLEHL---FDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEEEESCGGGS---SCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred cCEEEECChhhhc---CCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999998777665 45578999999999999999987644
No 167
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.43 E-value=1.4e-12 Score=123.07 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=96.5
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
...+...++..+..+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+. .++|.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-
Confidence 345555566667789999999999999999885 4569999999 7 99999999999888889999999998 45554
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.||+|++..+.|++. ......+++++++.|+|||++++....
T Consensus 268 ~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 268 GADVYLIKHVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp SCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred CceEEEhhhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 899999988877653 344568999999999999999976543
No 168
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.43 E-value=5.5e-13 Score=125.57 Aligned_cols=107 Identities=15% Similarity=0.069 Sum_probs=90.6
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc--ccCCCceeEEEec
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV--ELPVESVDIIISE 275 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~--~~~~~~fD~Iis~ 275 (319)
....+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+. ++| ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 35579999999999999999884 4569999999 7 9999999998888778999999999886 355 789999998
Q ss_pred cchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.+.|++. .+....+++++++.|+|||++++...
T Consensus 256 ~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 256 QFLDCFS-EEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp SCSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred chhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 8776543 35567899999999999999987553
No 169
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.43 E-value=9.6e-13 Score=123.87 Aligned_cols=115 Identities=17% Similarity=0.114 Sum_probs=94.0
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
+.++..+...++.+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+ +++ ..
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP-VT 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-CC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC-CC
Confidence 34445556667789999999999999999985 3459999999 8 999999999988887799999999976 445 34
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
||+|++..+.|++.. .....+++++.+.|+|||++++...
T Consensus 249 ~D~v~~~~vl~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSD-EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEEeccccCCCH-HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999888776532 3446899999999999999887654
No 170
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=2.6e-13 Score=138.08 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=95.3
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCC-CcEEEEEcCcccc-ccCCCceeEEEeccc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYD-SQIEVYHKLLEDV-ELPVESVDIIISEWM 277 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~-~~i~~i~~d~~~~-~~~~~~fD~Iis~~~ 277 (319)
++++|||+|||+|.++..++..|+.+|+++|+|+ +++.|+++++.+++. ++++++++|+.+. +...++||+|+++++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 5789999999999999999998888899999999 999999999999986 5899999999874 333478999999987
Q ss_pred hhh--------hcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 278 GYF--------LLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 278 ~~~--------l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
.+. +........++..+.++|+|||+++++++..
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 532 1223567888999999999999999998873
No 171
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.43 E-value=3.4e-13 Score=119.05 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=90.7
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+...+++.+...++.+|||+|||+|.++..+++.+..+|+++|+++ +++.|++++...++ .+++++.+|+. .++
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~-~~~ 153 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGS-KGF 153 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGG-GCC
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEECCcc-cCC
Confidence 3455566666667778889999999999999999986326999999999 99999999998887 46999999983 333
Q ss_pred CC-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 PV-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 ~~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+. .+||+|++....+++. .++.+.|+|||++++...+.
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~---------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIP---------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGGCCEEEEEECSBBSSCC---------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCccEEEECCcHHHHH---------HHHHHhcCCCcEEEEEEecC
Confidence 33 4599999887654432 25678999999999877653
No 172
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.43 E-value=3.8e-13 Score=121.43 Aligned_cols=115 Identities=25% Similarity=0.295 Sum_probs=95.0
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhc-C-CCCcEEEEEcCccccc
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKN-K-YDSQIEVYHKLLEDVE 263 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~-g-~~~~i~~i~~d~~~~~ 263 (319)
....++..+...++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++..+ + +.++++++.+|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 4456666677788899999999999999999984 356999999999 999999998877 4 4478999999999887
Q ss_pred cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 264 LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++.++||+|+++.. ....++.++.++|+|||.+++...+.
T Consensus 167 ~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 167 LPDGSVDRAVLDML--------APWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCTTCEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCCceeEEEECCc--------CHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 76788999998543 22367888999999999999877653
No 173
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=2.3e-13 Score=121.50 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=88.7
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c-c-----CCCc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E-L-----PVES 268 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~-~-----~~~~ 268 (319)
..++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+. + + +.++
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 345679999999999999999985 3 46999999999 9999999999998877899999998764 2 2 1478
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
||+|+++.. ......++..+.++|+|||+++++...+
T Consensus 157 fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 157 YDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp BSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 999998653 1346788999999999999999876443
No 174
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.43 E-value=3e-13 Score=119.63 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=90.9
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c-c--
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E-L-- 264 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~-~-- 264 (319)
.+...+...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++...+..++++++.+|+.+. + +
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 130 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLID 130 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHh
Confidence 3333344556789999999999999999986 3 46999999999 9999999999988866799999998653 1 1
Q ss_pred -----------C-C-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 265 -----------P-V-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 265 -----------~-~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+ . ++||+|+++.. ......++..+.++|+|||+++++...+
T Consensus 131 ~~~~~~~~~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 131 SKSAPSWASDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp CSSCCGGGTTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred hcccccccccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 1 1 68999998743 2455688999999999999999876543
No 175
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.42 E-value=7e-13 Score=123.88 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=96.2
Q ss_pred HHhcccccCC-CcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCC
Q psy8709 192 AILNNKSLFN-NKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVE 267 (319)
Q Consensus 192 ~i~~~l~~~~-~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~ 267 (319)
.++..++..+ +.+|||+|||+|.++..+++. +..+++++|+..+++.+++++...++.++++++.+|+.+.+ .+ +
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG-G 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT-C
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC-C
Confidence 4555566666 789999999999999999885 45699999993399999999998888788999999998876 44 6
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.||+|++..+.|++ .......+++++++.|+|||++++...
T Consensus 248 ~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 248 AADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 79999998887765 334568999999999999999987653
No 176
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.42 E-value=1.2e-13 Score=121.19 Aligned_cols=90 Identities=18% Similarity=0.110 Sum_probs=76.5
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCc-cccccC-CCceeEEEecc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLL-EDVELP-VESVDIIISEW 276 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~-~~~~~~-~~~fD~Iis~~ 276 (319)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.++++ ..+++++++|+ ..++++ .++||+|+++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 4568999999999999999999865 999999999 99988876 25799999999 556666 78999999862
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
++..++.++.++|||||.++
T Consensus 120 ---------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ---------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---------CCSGGGGGHHHHEEEEEEEE
T ss_pred ---------CHHHHHHHHHHHcCCCcEEE
Confidence 34567788899999999998
No 177
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.42 E-value=6.9e-13 Score=117.30 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=92.0
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCcee
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVD 270 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD 270 (319)
.+...+...++.+|||+|||+|.++..+++. ..+|+++|+++ +++.|+++...+++.++++++.+|+.+...+.++||
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 4455556678889999999999999999988 56999999999 999999999988887789999999987543557899
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+|+++.. ....++.++.++|+|||.+++...+
T Consensus 161 ~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 161 AAFVDVR--------EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EEEECSS--------CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EEEECCc--------CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9998643 2345678889999999999987764
No 178
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.42 E-value=1.4e-12 Score=122.36 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=95.1
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
.+.++..+...++.+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+.+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-- 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC--
Confidence 344555566677789999999999999999985 4559999999 8 9999999999888877899999999887655
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
.+|+|++..+.|++. .+....+++++.+.|+|||++++..
T Consensus 256 ~~D~v~~~~vlh~~~-d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 256 EADAVLFCRILYSAN-EQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCEEEEechhccCC-HHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 349999988777653 2457899999999999999997654
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=3.8e-13 Score=121.67 Aligned_cols=112 Identities=23% Similarity=0.203 Sum_probs=93.4
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
..++..+...++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+. ++.+
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 34555566778889999999999999999986 4 56999999999 9999999999888767899999999876 5557
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+||+|+++++ ....++.++.++|+|||.+++..++.
T Consensus 181 ~~D~V~~~~~--------~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 181 DVDALFLDVP--------DPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp SEEEEEECCS--------CGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred ccCEEEECCc--------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 8999998653 22467888899999999999877653
No 180
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.41 E-value=6.4e-13 Score=117.77 Aligned_cols=108 Identities=20% Similarity=0.166 Sum_probs=89.7
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c-c-----CCCc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E-L-----PVES 268 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~-~-----~~~~ 268 (319)
..++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+. + + +.++
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 345679999999999999999985 3 56999999999 9999999999999877899999998764 1 2 1478
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
||+|+++.. ......+++.+.++|+|||+++++.+.+.
T Consensus 148 fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 148 YDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred cCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 999998643 24567889999999999999999876543
No 181
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.41 E-value=1.8e-13 Score=115.13 Aligned_cols=97 Identities=16% Similarity=0.074 Sum_probs=76.5
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+ +++. ..+++++++|+.+ +++.++||+|++++++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPY 88 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCC
Confidence 456799999999999999999987 999999999 7765 2578999999987 4555899999999887
Q ss_pred hhhcch------hhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 279 YFLLFE------TMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 279 ~~l~~~------~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++.... .....++.++.+.| |||.+++....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 89 VPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp BTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred ccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 753221 12345677777777 99999986543
No 182
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.41 E-value=9.5e-13 Score=124.51 Aligned_cols=119 Identities=17% Similarity=0.082 Sum_probs=94.9
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA-AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
.+.+...++... ..++.+|||+|||+|.++..++..+. .+|+|+|+++ +++.|++++..+|+.++++++++|+.+++
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 456666666666 67788999999999999999999754 4899999999 99999999999998789999999999988
Q ss_pred cCCCceeEEEeccchhhhcc-----hhhHHHHHHHHhcccCCCcEEEe
Q psy8709 264 LPVESVDIIISEWMGYFLLF-----ETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 264 ~~~~~fD~Iis~~~~~~l~~-----~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
.+.++||+|++|+++..... ......+++.+.++| +|+.+++
T Consensus 282 ~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 282 QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 77789999999988553221 122477888999988 4433333
No 183
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.41 E-value=5.1e-13 Score=116.89 Aligned_cols=103 Identities=19% Similarity=0.216 Sum_probs=84.4
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcC------CCEEEEEecHH-HHHHHHHHHHhcCC----CCcEEEEEcCccccc---
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAG------AAKVFAIEKSD-IAYETIDIIRKNKY----DSQIEVYHKLLEDVE--- 263 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g------~~~V~gvD~s~-~i~~a~~~~~~~g~----~~~i~~i~~d~~~~~--- 263 (319)
...++.+|||+|||+|.++..+++.. ..+|+++|+++ +++.|++++...++ ..+++++.+|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 35667899999999999999999863 25999999999 99999999988773 368999999998754
Q ss_pred -cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 264 -LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 264 -~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
.+.++||+|+++...+. ++..+.++|+|||++++...
T Consensus 157 ~~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASE---------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEEc
Confidence 44578999998876543 23667889999999997754
No 184
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=8.8e-13 Score=122.70 Aligned_cols=113 Identities=17% Similarity=0.275 Sum_probs=86.5
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHhcC----------CCCcEEEEE
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSD-IAYETIDIIRKNK----------YDSQIEVYH 256 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~gvD~s~-~i~~a~~~~~~~g----------~~~~i~~i~ 256 (319)
...++..+...++.+|||+|||+|.++..+++. |. .+|+|+|+++ +++.|++++...+ ...+++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 444555567778899999999999999999986 54 7999999999 9999999987532 236899999
Q ss_pred cCcccc--ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 257 KLLEDV--ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 257 ~d~~~~--~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+|+.+. +++.++||+|+++.... ..++.++.++|+|||.+++...+
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~~~--------~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDMLNP--------HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSSST--------TTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCCCH--------HHHHHHHHHhcCCCcEEEEEeCC
Confidence 999876 44556899999875432 22678899999999999965543
No 185
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=5.2e-13 Score=116.90 Aligned_cols=107 Identities=19% Similarity=0.231 Sum_probs=88.7
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc--ccCC----Cc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV--ELPV----ES 268 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~--~~~~----~~ 268 (319)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+. .++. ++
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3456689999999999999999985 3 56999999999 9999999999998878999999998654 2221 68
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
||+|+++.. ......++..+.++|+|||+++++...
T Consensus 146 ~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 146 FDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred ccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 999998764 244567899999999999999987654
No 186
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.40 E-value=1.2e-12 Score=122.23 Aligned_cols=101 Identities=22% Similarity=0.222 Sum_probs=87.4
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
.++.+|||+|||+|.++.. ++ +..+|+|+|+|+ +++.++++++.+++.++++++++|+.+.. ++||+|+++++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 4678999999999999999 87 577999999999 99999999999998778999999998765 789999998764
Q ss_pred hhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 279 YFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 279 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
+. ..++..+.++|+|||.+++..++..
T Consensus 269 ~~-------~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 269 FA-------HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TG-------GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred hH-------HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 32 2677888899999999998776543
No 187
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.40 E-value=1.9e-12 Score=114.55 Aligned_cols=114 Identities=19% Similarity=0.191 Sum_probs=85.0
Q ss_pred HHHHHHHHhccc---ccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCc
Q psy8709 186 TESYKSAILNNK---SLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLL 259 (319)
Q Consensus 186 ~~~~~~~i~~~l---~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~ 259 (319)
...+...++..+ .+.++.+|||+|||+|.++..+++. +.++|+|+|+++ +++...+..+.. .++.++.+|+
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da 134 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADA 134 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCT
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEccc
Confidence 345555555554 4788999999999999999999884 356999999999 876666555543 5899999999
Q ss_pred ccccc---CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 260 EDVEL---PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 260 ~~~~~---~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
..... ..++||+|+++.+. ......++..+.++|||||+|+++
T Consensus 135 ~~~~~~~~~~~~~D~I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 135 RFPQSYKSVVENVDVLYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TCGGGTTTTCCCEEEEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhhccccceEEEEecCCC-----hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 76431 13689999998653 123334455666799999999977
No 188
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.40 E-value=9.5e-13 Score=116.18 Aligned_cols=108 Identities=12% Similarity=0.110 Sum_probs=88.9
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc----ccCC--Cce
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV----ELPV--ESV 269 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~----~~~~--~~f 269 (319)
..++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +.+. ++|
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 345679999999999999999985 3 45999999999 9999999999888877899999998653 1222 689
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
|+|+++.. ......++.++.++|+|||+++++...+.
T Consensus 150 D~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 150 DLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred CEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 99998654 14567889999999999999999876654
No 189
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.39 E-value=5.9e-13 Score=126.29 Aligned_cols=112 Identities=15% Similarity=0.121 Sum_probs=93.3
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc----CCCceeEEEec
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL----PVESVDIIISE 275 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~----~~~~fD~Iis~ 275 (319)
++.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|++++..+++. +++++.+|+.+... ..++||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999988 66999999999 999999999999984 59999999987632 14689999999
Q ss_pred cchhhhc------chhhHHHHHHHHhcccCCCcEEEeecCcceee
Q psy8709 276 WMGYFLL------FETMIDSVIDARNRFLKPDGVVCPNRFTLSLC 314 (319)
Q Consensus 276 ~~~~~l~------~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~~ 314 (319)
++.+... .......++..+.++|+|||++++++++....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 331 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT 331 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 8753321 12456778999999999999999998876543
No 190
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.39 E-value=2.1e-12 Score=121.04 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=93.3
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCce
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESV 269 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~f 269 (319)
.+++.+...++.+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+ +++ ..|
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~ 250 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP-RKA 250 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-SCE
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC-CCc
Confidence 3444555667789999999999999999885 3459999999 8 999999999988887799999999976 445 359
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
|+|++..+.|++. ......+++++.+.|+|||++++....
T Consensus 251 D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWP-DHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999988776643 244568999999999999999876543
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.39 E-value=1.2e-12 Score=116.52 Aligned_cols=108 Identities=16% Similarity=0.144 Sum_probs=83.6
Q ss_pred CCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhc--------CCCCcEEEEEcCccc-cc--cCC
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKN--------KYDSQIEVYHKLLED-VE--LPV 266 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~--------g~~~~i~~i~~d~~~-~~--~~~ 266 (319)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.+++++..+ ++ .++.++.+|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 456799999999999999999865 45899999999 999999988765 66 589999999987 44 556
Q ss_pred CceeEEEeccchhhhcch-----hhHHHHHHHHhcccCCCcEEEeec
Q psy8709 267 ESVDIIISEWMGYFLLFE-----TMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+.+|.|+...+..+.... .....++.++.++|+|||.|++.+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 789999865432211000 001478999999999999999854
No 192
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.39 E-value=5.4e-13 Score=121.68 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=91.3
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.+...+...++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.+++++...+..++++++.+|+.+.++
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 356677777777778888999999999999999999865 999999999 999999988777665689999999988766
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHH--------------HH--hcccCCCcEEE
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVID--------------AR--NRFLKPDGVVC 305 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~--------------~~--~r~LkpgG~li 305 (319)
+ +||+|+++.++++.. +.+..++. ++ +++|+|||.++
T Consensus 92 ~--~fD~vv~nlpy~~~~--~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 P--FFDTCVANLPYQISS--PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp C--CCSEEEEECCGGGHH--HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred h--hhcEEEEecCcccch--HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 5 799999998877541 12223332 11 35899999874
No 193
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=1.8e-12 Score=123.43 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=88.6
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEEEeccch
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDIIISEWMG 278 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~Iis~~~~ 278 (319)
++.+|||+|||+|.++..+++.|.. |+++|+|+ +++.|+++++.+++.. .+.++|+.+.. ...+.||+|+++++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 4789999999999999999998774 99999999 9999999999999853 46689987752 112449999999875
Q ss_pred hhhc------chhhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 279 YFLL------FETMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 279 ~~l~------~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
+.-. .......++..+.++|+|||.+++.+|+...
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~ 331 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL 331 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 2211 1234578899999999999999988887654
No 194
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.39 E-value=4e-13 Score=123.21 Aligned_cols=113 Identities=17% Similarity=0.104 Sum_probs=85.4
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh--cCC-CCcEEEEEcCcccc-ccCCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK--NKY-DSQIEVYHKLLEDV-ELPVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~--~g~-~~~i~~i~~d~~~~-~~~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ .++++++.+|+.+. +...++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34579999999999999999987 567999999999 99999988754 233 36899999998764 33347899999
Q ss_pred eccchhhhcchh--hHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 274 SEWMGYFLLFET--MIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 274 s~~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++.+..+..... ....+++.+.++|+|||+++++.++.+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 976543221111 126789999999999999999877643
No 195
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.39 E-value=9.3e-14 Score=132.90 Aligned_cols=116 Identities=16% Similarity=0.247 Sum_probs=90.3
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEE-EEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIE-VYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~-~i~~d~~~~~~ 264 (319)
..+.+.++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++ +...... +...+...+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 45566677777777888999999999999999999876 999999999 88877754 3321111 22344444555
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++||+|++..+++++ .++..++++++++|||||+++++...
T Consensus 168 ~~~~fD~I~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHI---PYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHCCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCEEEEEECChHHhc---CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 66899999998887776 57889999999999999999987543
No 196
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.39 E-value=1.8e-12 Score=125.63 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=95.6
Q ss_pred HhcccccCCCcceeeccCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCC
Q psy8709 193 ILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVE 267 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~ 267 (319)
+...+...++.+|||+|||+|..+..++.. +. .+|+++|+++ +++.++++++..|+ .+++++++|+.+.+ ++.+
T Consensus 251 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSS
T ss_pred HHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccC
Confidence 344456677889999999999999999984 33 6999999999 99999999999888 57999999998875 4446
Q ss_pred ceeEEEeccchhhh---cch---------hh-------HHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 268 SVDIIISEWMGYFL---LFE---------TM-------IDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 268 ~fD~Iis~~~~~~l---~~~---------~~-------~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
+||+|+++++.... ... .. ...++..+.++|||||.+++++|++.-
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 89999986543211 111 11 167899999999999999999998763
No 197
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.38 E-value=5.7e-13 Score=116.16 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=79.7
Q ss_pred CcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhh
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYF 280 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~ 280 (319)
+.+|||+|||+|.++..+++. +|+|+|+ +++.++++ +++++.+|+.+++++.++||+|++..+.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 689999999999999887654 9999999 88887764 578999999988877789999999887766
Q ss_pred hcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 281 LLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 281 l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+ .++..+++++.++|+|||.+++....
T Consensus 115 ~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 115 V---DDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp S---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c---cCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 5 55688999999999999999987543
No 198
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.38 E-value=1.1e-12 Score=121.70 Aligned_cols=116 Identities=18% Similarity=0.124 Sum_probs=93.8
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
...+...++..+ .+|||+|||+|.++..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+ +++ +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~ 232 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-S 232 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-S
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-C
Confidence 344444455555 89999999999999999885 4569999999 8 999999988777766789999999987 555 6
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+||+|++..+.|++ .......+++++++.|+|||++++....
T Consensus 233 ~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 233 NGDIYLLSRIIGDL-DEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp SCSEEEEESCGGGC-CHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCEEEEchhccCC-CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 79999998877654 2345568999999999999999977543
No 199
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.38 E-value=4.3e-13 Score=118.16 Aligned_cols=106 Identities=15% Similarity=0.042 Sum_probs=80.1
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecH-H-HHHHH---HHHHHhcCCCCcEEEEEcCccccccC-CCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKS-D-IAYET---IDIIRKNKYDSQIEVYHKLLEDVELP-VESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s-~-~i~~a---~~~~~~~g~~~~i~~i~~d~~~~~~~-~~~fD~I 272 (319)
.++.+|||+|||+|.++..+++. +..+|+|+|+| + |++.| ++++...++ .++.++.+|+++++.. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEEE
Confidence 35679999999999999999863 45589999999 6 77666 766667777 5899999999987532 2667877
Q ss_pred Eeccchhhhc--chhhHHHHHHHHhcccCCCcEEEe
Q psy8709 273 ISEWMGYFLL--FETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 273 is~~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
+++.+..... .......++.+++++|||||.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 7765433210 011235689999999999999998
No 200
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.38 E-value=8.7e-13 Score=127.80 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=92.9
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEE
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDII 272 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~I 272 (319)
+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++..|+. +.++++|+.++. ...++||+|
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEE
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEE
Confidence 34567789999999999999999974 336999999999 999999999999984 999999998765 234789999
Q ss_pred Eeccchhhhc------------ch-------hhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 273 ISEWMGYFLL------------FE-------TMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 273 is~~~~~~l~------------~~-------~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
++++++.... .. .....++..+.++|||||+|++++|++..
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 9876532110 00 12377899999999999999999999763
No 201
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=1.3e-12 Score=127.32 Aligned_cols=111 Identities=19% Similarity=0.087 Sum_probs=91.2
Q ss_pred CCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc-CCCceeEEEecc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL-PVESVDIIISEW 276 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~-~~~~fD~Iis~~ 276 (319)
++.+|||+|||+|..+..+++. +...|+|+|+++ +++.++++++..|+ .++.++++|+..+.. ..++||.|++++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 7789999999999999999984 346999999999 99999999999888 579999999988753 347899999976
Q ss_pred chhhh---c-ch---------------hhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 277 MGYFL---L-FE---------------TMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 277 ~~~~l---~-~~---------------~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++... . .. .....+|.++.++|||||+|++++|++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 53211 0 00 1135789999999999999999999975
No 202
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.37 E-value=1.2e-12 Score=126.63 Aligned_cols=116 Identities=16% Similarity=0.005 Sum_probs=93.5
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc-cCCCceeEE
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-LPVESVDII 272 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-~~~~~fD~I 272 (319)
+...++.+|||+|||+|..+..++.. +..+|+++|+++ +++.++++++..|+ .++.++++|+.++. ...++||+|
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-SNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-SSEEEECCCHHHHHHHHTTCEEEE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeCCHHHhhhhccccCCEE
Confidence 34567789999999999999999874 346999999999 99999999999998 57999999998764 234789999
Q ss_pred Eeccchhhhc----ch---------------hhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 273 ISEWMGYFLL----FE---------------TMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 273 is~~~~~~l~----~~---------------~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
++++++.... +. .....+|..+.++|||||+|++++||+..
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 9987632110 00 12247899999999999999999999863
No 203
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.36 E-value=2.5e-12 Score=121.61 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=88.0
Q ss_pred CCCcceeeccCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc-ccc-CCCceeEEEec
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGA-AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED-VEL-PVESVDIIISE 275 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~-~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~-~~~-~~~~fD~Iis~ 275 (319)
.++.+|||+| |+|.++..++..+. .+|+|+|+++ +++.|++++..+|+. +++++.+|+.+ ++. ..++||+|+++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEEC
Confidence 4578999999 99999999998754 7999999999 999999999998885 89999999988 542 23689999999
Q ss_pred cchhhhcchhhHHHHHHHHhcccCCCc-EEEeecCc
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKPDG-VVCPNRFT 310 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~LkpgG-~li~~~~t 310 (319)
++++.. ....++.++.+.|+||| .++++.++
T Consensus 249 ~p~~~~----~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 249 PPETLE----AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCSSHH----HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CCCchH----HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 875543 25889999999999999 44666554
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.36 E-value=1e-12 Score=122.48 Aligned_cols=114 Identities=19% Similarity=0.194 Sum_probs=88.3
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhc--CC-CCcEEEEEcCcccc--ccCCCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKN--KY-DSQIEVYHKLLEDV--ELPVESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~--g~-~~~i~~i~~d~~~~--~~~~~~fD~I 272 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++... ++ .++++++.+|+.+. ..+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45679999999999999999986 457999999999 999999887642 33 35899999998765 2345789999
Q ss_pred Eeccchhhhcchh-hHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 273 ISEWMGYFLLFET-MIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 273 is~~~~~~l~~~~-~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
+++....+..... ....+++.+.++|+|||+++++..+.+.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 9976532211111 1468999999999999999998655544
No 205
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.35 E-value=9e-13 Score=121.28 Aligned_cols=111 Identities=14% Similarity=0.150 Sum_probs=84.7
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh---cCCCCcEEEEEcCcccccc--CCCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK---NKYDSQIEVYHKLLEDVEL--PVESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~---~g~~~~i~~i~~d~~~~~~--~~~~fD~I 272 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.+++++.. .....+++++.+|+.+... +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 45679999999999999999986 457999999999 99999987632 2223689999999987653 35789999
Q ss_pred EeccchhhhcchhhH--HHHHHHHhcccCCCcEEEeecCcc
Q psy8709 273 ISEWMGYFLLFETMI--DSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 273 is~~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+++.+.+... ...+ ..+++.+.++|||||++++...+.
T Consensus 174 i~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 174 IIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 9987654321 1112 578999999999999999876543
No 206
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.35 E-value=1.1e-12 Score=114.94 Aligned_cols=113 Identities=14% Similarity=0.098 Sum_probs=86.9
Q ss_pred HHHHHHhccc--ccCCCcceeeccCCCchHHHHHHHc-CC------CEEEEEecHH-HHHHHHHHHHhcCC----CCcEE
Q psy8709 188 SYKSAILNNK--SLFNNKHVIDVGAGTGILSIFAAQA-GA------AKVFAIEKSD-IAYETIDIIRKNKY----DSQIE 253 (319)
Q Consensus 188 ~~~~~i~~~l--~~~~~~~VLDiGcGtG~ls~~la~~-g~------~~V~gvD~s~-~i~~a~~~~~~~g~----~~~i~ 253 (319)
.+...++..+ ...++.+|||+|||+|.++..+++. +. .+|+++|+++ +++.+++++...+. ..+++
T Consensus 69 ~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 148 (227)
T 1r18_A 69 HMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL 148 (227)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE
Confidence 3344444444 3566789999999999999999884 42 5999999999 99999998877651 25899
Q ss_pred EEEcCccccccCC-CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 254 VYHKLLEDVELPV-ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 254 ~i~~d~~~~~~~~-~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
++.+|+.+ .++. ++||+|++....+++ +.++.++|||||++++....
T Consensus 149 ~~~~d~~~-~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 149 IVEGDGRK-GYPPNAPYNAIHVGAAAPDT---------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEESCGGG-CCGGGCSEEEEEECSCBSSC---------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCccc-CCCcCCCccEEEECCchHHH---------HHHHHHHhcCCCEEEEEEec
Confidence 99999987 3333 789999988765543 25678899999999987654
No 207
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.35 E-value=1.4e-12 Score=119.53 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=83.9
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcC---C-CCcEEEEEcCccccc-cCCCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNK---Y-DSQIEVYHKLLEDVE-LPVESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g---~-~~~i~~i~~d~~~~~-~~~~~fD~I 272 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++...+ + .++++++.+|+.+.. .+.++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 34579999999999999999996 567999999999 9999999876531 1 358999999987652 345789999
Q ss_pred EeccchhhhcchhhH--HHHHHHHhcccCCCcEEEeecCcce
Q psy8709 273 ISEWMGYFLLFETMI--DSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 273 is~~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
+++...... ....+ ..+++.+.+.|+|||+++++..+.+
T Consensus 162 i~D~~~p~~-~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 162 ISDCTDPIG-PGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred EECCCCccC-cchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 997654321 11222 6789999999999999998865443
No 208
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.35 E-value=4.2e-12 Score=109.35 Aligned_cols=101 Identities=24% Similarity=0.154 Sum_probs=82.6
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
...++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.+++++..+++ +++++.+|+.+++ ++||+|++++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 3456789999999999999999998777999999999 99999999988876 7999999998853 4899999999
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEe
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
+++.... .....+++.+.+.| ||.++.
T Consensus 121 p~~~~~~-~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 121 PFGSQRK-HADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCSSSST-TTTHHHHHHHHHHC--SEEEEE
T ss_pred CCccccC-CchHHHHHHHHHhc--CcEEEE
Confidence 8765433 33456778888887 554443
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.34 E-value=5.9e-13 Score=121.15 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=85.0
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc--CC--------CCcEEEEEcCccccccCCCc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN--KY--------DSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~--g~--------~~~i~~i~~d~~~~~~~~~~ 268 (319)
.++.+|||+|||+|.++..+++.+..+|+++|+++ +++.|++++ .. ++ .++++++.+|+.+.....++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45679999999999999999988767999999999 999999887 33 22 46899999998654211478
Q ss_pred eeEEEeccchhhhcchhh--HHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 269 VDIIISEWMGYFLLFETM--IDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~--~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
||+|+++.+.++-. ... ...+++.+.++|+|||+++++..+.
T Consensus 153 fD~Ii~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 153 FDVIIADSTDPVGP-AKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp EEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred eeEEEECCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99999987643211 111 2678999999999999999986543
No 210
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.34 E-value=4e-12 Score=115.29 Aligned_cols=108 Identities=21% Similarity=0.241 Sum_probs=82.7
Q ss_pred CCcceeeccCCCch----HHHHHHHc-C----CCEEEEEecHH-HHHHHHHHHHh-----------------------cC
Q psy8709 201 NNKHVIDVGAGTGI----LSIFAAQA-G----AAKVFAIEKSD-IAYETIDIIRK-----------------------NK 247 (319)
Q Consensus 201 ~~~~VLDiGcGtG~----ls~~la~~-g----~~~V~gvD~s~-~i~~a~~~~~~-----------------------~g 247 (319)
++.+|+|+|||||. +++.+++. + ..+|+|+|+|+ +++.|++.+.. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34799999999998 66666664 3 23899999999 99999876410 00
Q ss_pred -------CCCcEEEEEcCccccccC-CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 248 -------YDSQIEVYHKLLEDVELP-VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 248 -------~~~~i~~i~~d~~~~~~~-~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+..++.|.++|+.+.+++ .++||+|+|..+.+++. .+...+++..+++.|+|||+|++.+.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~-~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFD-KTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSC-HHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCC-HHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 013699999999886554 47899999977666653 35568999999999999999998554
No 211
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.34 E-value=7.5e-13 Score=122.78 Aligned_cols=112 Identities=19% Similarity=0.202 Sum_probs=86.4
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh--cCC-CCcEEEEEcCcccc-ccCCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK--NKY-DSQIEVYHKLLEDV-ELPVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~--~g~-~~~i~~i~~d~~~~-~~~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ .++++++.+|+.+. +...++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 34579999999999999999986 567999999999 99999988765 233 36899999998764 22347899999
Q ss_pred eccchhhhcchhhH-HHHHHHHhcccCCCcEEEeecCcc
Q psy8709 274 SEWMGYFLLFETMI-DSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 274 s~~~~~~l~~~~~~-~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++....+-...... ..+++.+.+.|+|||++++...+.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 97643221111111 688999999999999999976554
No 212
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.34 E-value=3e-12 Score=123.28 Aligned_cols=121 Identities=14% Similarity=0.079 Sum_probs=95.9
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCC
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPV 266 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~ 266 (319)
..+...+...++.+|||+|||+|..+..+++.. ..+|+|+|+++ +++.++++++..|. +++++.+|+.+.+ ++.
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTT
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhccc
Confidence 334444566788899999999999999999853 36999999999 99999999998887 4789999998775 455
Q ss_pred CceeEEEeccchhhh---cc---------hhh-------HHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 267 ESVDIIISEWMGYFL---LF---------ETM-------IDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l---~~---------~~~-------~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
++||+|++++++... .. ..+ ...++..+.++|||||++++++|++..
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 789999987653221 11 111 257899999999999999999999863
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.33 E-value=1e-12 Score=121.49 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=84.1
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhc--CC-CCcEEEEEcCcccc-ccCCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKN--KY-DSQIEVYHKLLEDV-ELPVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~--g~-~~~i~~i~~d~~~~-~~~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++... ++ .++++++.+|+.+. +.+.++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 34579999999999999999986 457999999999 999999987643 33 46899999998764 33457899999
Q ss_pred eccchhhhcchhhH-HHHHHHHhcccCCCcEEEeecCcce
Q psy8709 274 SEWMGYFLLFETMI-DSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 274 s~~~~~~l~~~~~~-~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++...+.-...... ..+++.+.++|+|||+++++..+.+
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 98754321111112 6889999999999999999875543
No 214
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.33 E-value=8.3e-13 Score=117.10 Aligned_cols=98 Identities=9% Similarity=0.037 Sum_probs=78.0
Q ss_pred CCCcceeeccCCCchHHHHHHHc-----CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc---ccCC-Cce
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-----GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV---ELPV-ESV 269 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-----g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~---~~~~-~~f 269 (319)
.++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.|+ +...+++++++|+.+. +... .+|
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~f 153 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAH 153 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCC
Confidence 35679999999999999999885 346999999999 877765 1236899999999874 4333 379
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhc-ccCCCcEEEeecC
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNR-FLKPDGVVCPNRF 309 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r-~LkpgG~li~~~~ 309 (319)
|+|+++.. | .....++.++.+ +|||||+++++..
T Consensus 154 D~I~~d~~-~-----~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNA-H-----ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SEEEEESS-C-----SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CEEEECCc-h-----HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 99998654 2 245778999997 9999999998754
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=1.4e-12 Score=120.03 Aligned_cols=113 Identities=18% Similarity=0.158 Sum_probs=85.3
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh--cCC-CCcEEEEEcCcccc-ccCCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK--NKY-DSQIEVYHKLLEDV-ELPVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~--~g~-~~~i~~i~~d~~~~-~~~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ .++++++.+|+.+. +...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45679999999999999999986 457999999999 99999988765 333 46899999998763 33457899999
Q ss_pred eccchhhhcch-hhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 274 SEWMGYFLLFE-TMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 274 s~~~~~~l~~~-~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++...+..... .....+++.+.++|+|||+++++..+.+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 98764321111 1135689999999999999998875543
No 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.32 E-value=2e-12 Score=117.31 Aligned_cols=111 Identities=15% Similarity=0.114 Sum_probs=86.6
Q ss_pred CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh--cCC-CCcEEEEEcCcccc-ccCCCceeEEEe
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK--NKY-DSQIEVYHKLLEDV-ELPVESVDIIIS 274 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~--~g~-~~~i~~i~~d~~~~-~~~~~~fD~Iis 274 (319)
++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ .++++++.+|+.+. +...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4579999999999999999987 667999999999 99999988754 233 36899999998764 333478999999
Q ss_pred ccchhhhcchh-hHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 275 EWMGYFLLFET-MIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 275 ~~~~~~l~~~~-~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+.+.++..... ....+++.+.+.|+|||+++++..+.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 87643211100 12578899999999999999987654
No 217
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.31 E-value=2e-12 Score=107.32 Aligned_cols=100 Identities=15% Similarity=0.244 Sum_probs=78.8
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-C-CCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccc--------cCCCc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVE--------LPVES 268 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--------~~~~~ 268 (319)
..++.+|||+|||+|.++..+++. + ..+++|+|+++++. . .+++++.+|+.+.+ ++.++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----------~-~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----------I-VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----------C-TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----------c-CcEEEEEcccccchhhhhhhccCCCCc
Confidence 556789999999999999999886 4 36999999998211 1 57999999998876 66679
Q ss_pred eeEEEeccchhhhcch--h------hHHHHHHHHhcccCCCcEEEeecC
Q psy8709 269 VDIIISEWMGYFLLFE--T------MIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~--~------~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
||+|+++.+.++.... . ....++.++.++|+|||.+++...
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999998776554321 1 126889999999999999997543
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.31 E-value=2.4e-12 Score=118.98 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=87.1
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHh--cC-C-CCcEEEEEcCcccc-ccCCCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRK--NK-Y-DSQIEVYHKLLEDV-ELPVESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~--~g-~-~~~i~~i~~d~~~~-~~~~~~fD~I 272 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++.. .+ + .++++++.+|+.+. +...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 34579999999999999999986 467999999999 99999988754 22 2 36899999999774 3345789999
Q ss_pred Eeccchhh-hcc-hhh--HHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 273 ISEWMGYF-LLF-ETM--IDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 273 is~~~~~~-l~~-~~~--~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+++...++ ... ... ...+++.+.++|+|||+++++..+.
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 99876443 001 111 3688999999999999999876543
No 219
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.31 E-value=2.9e-12 Score=114.91 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=78.3
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|+++. .++.++.+|+.+++++.++||+|++...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 45679999999999999999986 345999999999 988887653 4678999999988887789999998543
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
. .++.++.++|||||.+++....
T Consensus 158 ~----------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 158 P----------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp C----------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred h----------hhHHHHHHhcCCCcEEEEEEcC
Confidence 1 2468889999999999976543
No 220
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.30 E-value=3.2e-12 Score=119.53 Aligned_cols=112 Identities=12% Similarity=0.111 Sum_probs=86.0
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCcee
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVD 270 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD 270 (319)
.++..++..++.+|||||||+|.++..+++. +..+++++|+++++. +++....+..++++++.+|+. .+.| +||
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D 249 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HAD 249 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCS
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCC-CCCC--CCc
Confidence 4555566677889999999999999999884 455899999977443 323333455578999999997 3445 899
Q ss_pred EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 271 IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 271 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+|++..+.|++. ......+|+++++.|||||++++...
T Consensus 250 ~v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 250 VHVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999988877653 24457899999999999999987654
No 221
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.30 E-value=6.9e-12 Score=107.59 Aligned_cols=96 Identities=17% Similarity=0.062 Sum_probs=73.8
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
...++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.+++++. +++++.+|+.+++ ++||+|++++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECC
Confidence 3446789999999999999999998777899999999 9998887653 6899999998853 6899999999
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
++++... .....+++++.+.+ |+.++
T Consensus 119 p~~~~~~-~~~~~~l~~~~~~~--g~~~~ 144 (200)
T 1ne2_A 119 PFGSVVK-HSDRAFIDKAFETS--MWIYS 144 (200)
T ss_dssp CC--------CHHHHHHHHHHE--EEEEE
T ss_pred CchhccC-chhHHHHHHHHHhc--CcEEE
Confidence 9877643 22346788888888 44333
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.30 E-value=3.1e-12 Score=116.50 Aligned_cols=112 Identities=16% Similarity=0.153 Sum_probs=87.5
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcC--C-CCcEEEEEcCccccc-cCCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNK--Y-DSQIEVYHKLLEDVE-LPVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g--~-~~~i~~i~~d~~~~~-~~~~~fD~Ii 273 (319)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++...+ + .++++++.+|+.+.. ...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45679999999999999999986 457999999999 9999998875432 1 368999999997642 2247899999
Q ss_pred eccchhhhcchhhH--HHHHHHHhcccCCCcEEEeecCcce
Q psy8709 274 SEWMGYFLLFETMI--DSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 274 s~~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++...++. ....+ ..+++.+.+.|+|||+++++..+.+
T Consensus 157 ~d~~~~~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 157 VDSSDPIG-PAETLFNQNFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp EECCCTTT-GGGGGSSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred EcCCCCCC-cchhhhHHHHHHHHHHhcCCCcEEEEECCCcc
Confidence 97654322 11222 6899999999999999999876544
No 223
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.29 E-value=2.1e-12 Score=118.53 Aligned_cols=112 Identities=19% Similarity=0.229 Sum_probs=85.8
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.+++++..++. ++++++.+|+.+.++
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~- 104 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF- 104 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-
Confidence 4566667777777788899999999999999999985 4999999999 99999999887776 689999999988765
Q ss_pred CCceeEEEeccchhhhcchhhHHHHH---------------HHHhcccCCCcEE
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVI---------------DARNRFLKPDGVV 304 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l---------------~~~~r~LkpgG~l 304 (319)
++||+|+++.++++. ...+..++ +.+.|+++++|..
T Consensus 105 -~~~D~Vv~n~py~~~--~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~ 155 (299)
T 2h1r_A 105 -PKFDVCTANIPYKIS--SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDS 155 (299)
T ss_dssp -CCCSEEEEECCGGGH--HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTST
T ss_pred -ccCCEEEEcCCcccc--cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCc
Confidence 489999999887754 22334444 3466888888853
No 224
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=3.9e-12 Score=117.33 Aligned_cols=106 Identities=14% Similarity=0.159 Sum_probs=83.6
Q ss_pred cceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--cCCCceeEEEeccch
Q psy8709 203 KHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--LPVESVDIIISEWMG 278 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~~~~~fD~Iis~~~~ 278 (319)
.+|||||||+|.++..+++ .+..+|++||+++ +++.|++++.... ..+++++.+|+.++. .+.++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 3899999999999999998 5555999999999 9999998875432 368999999997752 345789999997643
Q ss_pred hhhcchh-hHHHHHHHHhcccCCCcEEEeecC
Q psy8709 279 YFLLFET-MIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 279 ~~l~~~~-~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+...... ....+++.++++|+|||+|+++..
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3211111 126789999999999999998765
No 225
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.28 E-value=6.7e-12 Score=113.31 Aligned_cols=123 Identities=12% Similarity=0.086 Sum_probs=89.6
Q ss_pred HHHHHHhccccc-CCCcceeeccCCC--chHHHHHHH--cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 188 SYKSAILNNKSL-FNNKHVIDVGAGT--GILSIFAAQ--AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 188 ~~~~~i~~~l~~-~~~~~VLDiGcGt--G~ls~~la~--~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
.+.......+.. ....+|||+|||+ +..+..+++ .+..+|+++|.|+ |+..|++++...+. .+++++++|+.+
T Consensus 64 ~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~ 142 (277)
T 3giw_A 64 DWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLD 142 (277)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTC
T ss_pred HHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccC
Confidence 344444444432 2336899999997 334444443 3556999999999 99999988865432 579999999987
Q ss_pred ccc----C--CCcee-----EEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 262 VEL----P--VESVD-----IIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 262 ~~~----~--~~~fD-----~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
... + .+.|| .|+++.++||+.....+..+++++.+.|+|||+|++++.+.
T Consensus 143 ~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 143 PASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred hhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 521 1 23455 58889999998776667899999999999999999987654
No 226
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.28 E-value=6.2e-12 Score=107.65 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=75.6
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-C--CCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccc------------
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-G--AAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVE------------ 263 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g--~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~------------ 263 (319)
..++.+|||+|||+|.++..+++. + ..+|+|+|+|++. .. .+++++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 456789999999999999999985 4 4699999999921 12 57899999998765
Q ss_pred -------------cCCCceeEEEeccchhhhcc--hh------hHHHHHHHHhcccCCCcEEEeec
Q psy8709 264 -------------LPVESVDIIISEWMGYFLLF--ET------MIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 264 -------------~~~~~fD~Iis~~~~~~l~~--~~------~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++.++||+|+++.+.++... .+ ....++.++.++|||||.+++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 45578999999876544211 01 12357899999999999999754
No 227
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=1.4e-11 Score=118.79 Aligned_cols=116 Identities=18% Similarity=0.163 Sum_probs=93.0
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV- 262 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~- 262 (319)
.++.+.+.+++.+...++.+|||+|||+|.++..+++. ..+|+|+|+|+ +++.|+++++.+++ .+++|+.+|+.+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~-~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL-QNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEECCHHHHh
Confidence 35677778877777777889999999999999999998 45999999999 99999999999988 4899999999873
Q ss_pred ---ccCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 263 ---ELPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 263 ---~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+++.++||+|+++++.... . .+++.+. .++|+++++++..
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~---~---~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA---A---GVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC---H---HHHHHHH-HHCCSEEEEEESC
T ss_pred hhhhhhcCCCCEEEECCCCccH---H---HHHHHHH-hcCCCeEEEEECC
Confidence 3445689999999886432 1 2344433 3789998887654
No 228
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.28 E-value=7.4e-13 Score=119.57 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=76.9
Q ss_pred HHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHH-HHhcCCCCcEEEE--EcCccccccCCCc
Q psy8709 192 AILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDI-IRKNKYDSQIEVY--HKLLEDVELPVES 268 (319)
Q Consensus 192 ~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~-~~~~g~~~~i~~i--~~d~~~~~~~~~~ 268 (319)
.+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++|+..+.+. ........++.++ ++|+.+++ .++
T Consensus 65 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 65 WMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp HHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCC
T ss_pred HHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCC
Confidence 3333344567789999999999999999988 589999999942222111 0000111268899 89998765 578
Q ss_pred eeEEEeccchhhhcch-hh-H--HHHHHHHhcccCCCc--EEEeecC
Q psy8709 269 VDIIISEWMGYFLLFE-TM-I--DSVIDARNRFLKPDG--VVCPNRF 309 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~-~~-~--~~~l~~~~r~LkpgG--~li~~~~ 309 (319)
||+|+|+.. +..... .+ . ..+|..+.++||||| .|++...
T Consensus 141 fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 141 TDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 999999876 332211 11 1 137899999999999 8887543
No 229
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.28 E-value=2.1e-12 Score=117.83 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=75.3
Q ss_pred Hhccccc-CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEE-EcCccccc---cCC
Q psy8709 193 ILNNKSL-FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVY-HKLLEDVE---LPV 266 (319)
Q Consensus 193 i~~~l~~-~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i-~~d~~~~~---~~~ 266 (319)
++..+.. .++.+|||+|||||.++..+++.|+.+|+|+|+|+ |++.+.+. . .++... ..++..+. ++.
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~---~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D---DRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C---TTEEEECSCCGGGCCGGGCTT
T ss_pred HHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C---cccceecccCceecchhhCCC
Confidence 3344433 45679999999999999999999888999999999 98875432 1 234332 33444433 344
Q ss_pred CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 267 ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 267 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
.+||+|+++..++. +..+|.++.++|+|||.+++-
T Consensus 150 ~~fD~v~~d~sf~s------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 150 GLPSFASIDVSFIS------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEEEeeHhh------HHHHHHHHHHHcCcCCEEEEE
Confidence 46999999876543 367899999999999999875
No 230
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.28 E-value=1.1e-11 Score=117.73 Aligned_cols=126 Identities=12% Similarity=0.022 Sum_probs=100.4
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC---------------------------------------
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA--------------------------------------- 224 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--------------------------------------- 224 (319)
+..+.+...++......++..|||++||+|.+++.++..+.
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 34577888888888888889999999999999998887531
Q ss_pred CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhh-hcchhhHHHHHHHHhcccCC--
Q psy8709 225 AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYF-LLFETMIDSVIDARNRFLKP-- 300 (319)
Q Consensus 225 ~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~-l~~~~~~~~~l~~~~r~Lkp-- 300 (319)
.+|+|+|+++ +++.|++++..+|+.+++++.++|+.+++.+ ++||+|++|+++.. +.....+..+.+.+.+.|++
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 3799999999 9999999999999977899999999988765 68999999998542 22234566677777667765
Q ss_pred CcEEEeecCc
Q psy8709 301 DGVVCPNRFT 310 (319)
Q Consensus 301 gG~li~~~~t 310 (319)
||.+++-+..
T Consensus 337 g~~~~iit~~ 346 (385)
T 3ldu_A 337 NWSYYLITSY 346 (385)
T ss_dssp SCEEEEEESC
T ss_pred CCEEEEEECC
Confidence 7777654443
No 231
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=1.6e-11 Score=116.84 Aligned_cols=125 Identities=12% Similarity=0.022 Sum_probs=98.5
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC---------------------------------------
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA--------------------------------------- 224 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--------------------------------------- 224 (319)
+-.+.+...++......++..|||++||+|.+++.++..+.
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 33577888888888888889999999999999998887422
Q ss_pred CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhhh-cchhhHHHHHHHHhcccCC--
Q psy8709 225 AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYFL-LFETMIDSVIDARNRFLKP-- 300 (319)
Q Consensus 225 ~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~Lkp-- 300 (319)
.+|+|+|+++ +++.|++++..+|+.++++++++|+.+++.+ .+||+|++|+++..- .....+..+...+.+.||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 3599999999 9999999999999977899999999988765 589999999986422 1224455566666666655
Q ss_pred CcEEEeecC
Q psy8709 301 DGVVCPNRF 309 (319)
Q Consensus 301 gG~li~~~~ 309 (319)
||.+++-+.
T Consensus 343 g~~~~iit~ 351 (393)
T 3k0b_A 343 TWSVYVLTS 351 (393)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 877765444
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.26 E-value=8.6e-12 Score=107.02 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=73.9
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc--------C---CC
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVEL--------P---VE 267 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~--------~---~~ 267 (319)
..++.+|||+|||+|.++..+++. ..+|+|+|++++ ... .+++++++|+.+... + .+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~----------~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM----------EEI-AGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC----------CCC-TTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc----------ccC-CCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 456789999999999999999998 559999999982 112 579999999987542 1 14
Q ss_pred ceeEEEeccchhhhc--------chhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 268 SVDIIISEWMGYFLL--------FETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~--------~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
+||+|+|+++..... .......++..+.++|||||.|++..
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 899999976422111 11234678899999999999998644
No 233
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.25 E-value=9.5e-12 Score=117.61 Aligned_cols=108 Identities=14% Similarity=0.181 Sum_probs=81.6
Q ss_pred HHHHHHhcccccCCCcceeeccCC------CchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcC
Q psy8709 188 SYKSAILNNKSLFNNKHVIDVGAG------TGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKL 258 (319)
Q Consensus 188 ~~~~~i~~~l~~~~~~~VLDiGcG------tG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d 258 (319)
.+.+.++..+. .++.+||||||| +|..+..+++. +..+|+|+|+|+ |. . ...+++++++|
T Consensus 204 ~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~--~~~rI~fv~GD 272 (419)
T 3sso_A 204 PHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V--DELRIRTIQGD 272 (419)
T ss_dssp HHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G--CBTTEEEEECC
T ss_pred HHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h--cCCCcEEEEec
Confidence 34444444443 245799999999 77777766653 556999999999 72 1 22689999999
Q ss_pred ccccccC------CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 259 LEDVELP------VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 259 ~~~~~~~------~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+.++++. .++||+|+++... + ..+...+|++++++|||||+++++...
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgsH-~---~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGSH-I---NAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSCC-C---HHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccccchhhhhhcccCCccEEEECCcc-c---chhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9987665 5899999997653 2 256788999999999999999987654
No 234
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.25 E-value=3.6e-11 Score=114.00 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=101.3
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCC---------------------------------------
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGA--------------------------------------- 224 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--------------------------------------- 224 (319)
+-.+.+...++......++..+||.+||+|.+++.++..+.
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 34577888888888888889999999999999998887422
Q ss_pred CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchhhh-cchhhHHHHHHHHhcccCC--
Q psy8709 225 AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGYFL-LFETMIDSVIDARNRFLKP-- 300 (319)
Q Consensus 225 ~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~Lkp-- 300 (319)
.+|+|+|+++ +++.|++|+..+|+.+.++++++|+.+++.+ .+||+|++|+++..- ..+..+..+...+.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 3599999999 9999999999999988899999999998765 589999999986532 2335566777777767765
Q ss_pred CcEEEeecCc
Q psy8709 301 DGVVCPNRFT 310 (319)
Q Consensus 301 gG~li~~~~t 310 (319)
||.+++-+..
T Consensus 336 g~~~~iit~~ 345 (384)
T 3ldg_A 336 TWSQFILTND 345 (384)
T ss_dssp TSEEEEEESC
T ss_pred CcEEEEEECC
Confidence 8877755443
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=105.41 Aligned_cols=100 Identities=22% Similarity=0.251 Sum_probs=74.3
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-CC---------CEEEEEecHHHHHHHHHHHHhcCCCCcEEEE-EcCccccc----
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-GA---------AKVFAIEKSDIAYETIDIIRKNKYDSQIEVY-HKLLEDVE---- 263 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g~---------~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i-~~d~~~~~---- 263 (319)
..++.+|||+|||+|.++..+++. +. .+|+|+|++++ ... .+++++ .+|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~----------~~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI----------FPL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC----------CCC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc----------ccC-CCCeEEEeccCCCHHHHHH
Confidence 456789999999999999999986 54 69999999992 112 468888 88887643
Q ss_pred ----cCCCceeEEEeccchhhhcch-hh-------HHHHHHHHhcccCCCcEEEeecC
Q psy8709 264 ----LPVESVDIIISEWMGYFLLFE-TM-------IDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 264 ----~~~~~fD~Iis~~~~~~l~~~-~~-------~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
++.++||+|+++...++..+. .+ ...++.++.++|||||.+++...
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 234589999996643321111 11 25789999999999999998754
No 236
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.24 E-value=7.4e-11 Score=108.73 Aligned_cols=115 Identities=15% Similarity=0.022 Sum_probs=89.8
Q ss_pred cccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCC---Ccee
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPV---ESVD 270 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~---~~fD 270 (319)
+...++.+|||+|||+|..+..+++. +..+|+++|+++ +++.++++++..|+ .+++++++|+.++.... .+||
T Consensus 98 l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 98 LDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGGTTEE
T ss_pred hCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccccccCCCC
Confidence 34567789999999999999999884 456999999999 99999999999988 67999999998765321 5799
Q ss_pred EEEeccchhhh----cc----------hhh-------HHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 271 IIISEWMGYFL----LF----------ETM-------IDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 271 ~Iis~~~~~~l----~~----------~~~-------~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
.|+++++.... .+ ... ...+|..+.++|+ ||+++.++|++..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 99987653211 00 011 2357888888887 9999999999863
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.23 E-value=4e-11 Score=115.23 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=86.6
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
+.+.+.+.. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|++++..+++ . ++++.+|+.++..
T Consensus 279 e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl-~-v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 279 VNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNV-D-AEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTC-C-EEEEECCTTTCCC-
T ss_pred HHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC-c-EEEEECChHHcCc-
Confidence 455555555 4567899999999999999999974 4999999999 99999999999988 3 9999999988643
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+||+|+++++...+ ...++..+. .|+|||+++++...
T Consensus 352 -~~fD~Vv~dPPr~g~-----~~~~~~~l~-~l~p~givyvsc~p 389 (425)
T 2jjq_A 352 -KGFDTVIVDPPRAGL-----HPRLVKRLN-REKPGVIVYVSCNP 389 (425)
T ss_dssp -TTCSEEEECCCTTCS-----CHHHHHHHH-HHCCSEEEEEESCH
T ss_pred -cCCCEEEEcCCccch-----HHHHHHHHH-hcCCCcEEEEECCh
Confidence 389999999874321 123444443 48999999988653
No 238
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.23 E-value=8.7e-12 Score=124.18 Aligned_cols=102 Identities=19% Similarity=0.156 Sum_probs=81.1
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc--ccCCCceeEEEeccc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV--ELPVESVDIIISEWM 277 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~--~~~~~~fD~Iis~~~ 277 (319)
++.+|||||||+|.++..+++.|+ .|+|||+++ +++.|+..+...+. -++.+.+++++++ ..+.++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 346999999999999999999987 999999999 99999999888774 3799999999987 345678999999888
Q ss_pred hhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
.+++.+...... +..+.+.|+++|..+
T Consensus 144 ~ehv~~~~~~~~-~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 144 FHHIVHLHGIDE-VKRLLSRLADVTQAV 170 (569)
T ss_dssp HHHHHHHHCHHH-HHHHHHHHHHHSSEE
T ss_pred hhcCCCHHHHHH-HHHHHHHhcccccee
Confidence 888754333222 234555667766654
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.22 E-value=2.5e-11 Score=113.39 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=86.2
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCC------CEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeE
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGA------AKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDI 271 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~------~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~ 271 (319)
..++.+|||+|||+|.++..+++... .+++|+|+++ +++.|+.++..++. ++.++.+|..... +.++||+
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-~~~~fD~ 204 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-LVDPVDV 204 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-CCCCEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-ccCCccE
Confidence 34567999999999999998887521 5899999999 99999999888776 6889999987643 3478999
Q ss_pred EEeccchhhhcchh---------------hHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 272 IISEWMGYFLLFET---------------MIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 272 Iis~~~~~~l~~~~---------------~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
|++|+++.+..... ....++..+.+.|+|||++++..+.-
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 99999865432211 11258999999999999998776543
No 240
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.20 E-value=9.5e-12 Score=107.74 Aligned_cols=88 Identities=24% Similarity=0.221 Sum_probs=73.7
Q ss_pred CCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccchh
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMGY 279 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~~ 279 (319)
.++.+|||+|||+|.++..++ .+|+|+|+++. +++++.+|+.+++++.++||+|++..+.|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 456899999999999987772 58999999982 56788999998888778999999977664
Q ss_pred hhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 280 FLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 280 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
+ .+...++.++.++|+|||.+++....
T Consensus 127 ~----~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 127 G----TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp S----SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred c----cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 2 56789999999999999999986543
No 241
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.20 E-value=4.3e-11 Score=112.82 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=84.9
Q ss_pred HHHHhcccc-cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 190 KSAILNNKS-LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 190 ~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
...++..++ ..+..+|||||||+|.++..+++. +..+++++|+..+++.+++ .++++++.+|+.+ ++|..
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA-------FSGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-------CTTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhh-------cCCCEEEecCCCC-CCCCC
Confidence 344555554 566789999999999999999884 5569999999337665542 1589999999987 66643
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
|+|++..+.|++.. .....+|+++++.|+|||++++....
T Consensus 263 --D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 263 --DAIFIKWICHDWSD-EHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp --SEEEEESCGGGBCH-HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred --CEEEEechhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999888776533 55678999999999999999876543
No 242
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.20 E-value=2.8e-12 Score=113.56 Aligned_cols=97 Identities=19% Similarity=0.188 Sum_probs=64.6
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEE-cCcccc---ccCCCceeEEE
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYH-KLLEDV---ELPVESVDIII 273 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~-~d~~~~---~~~~~~fD~Ii 273 (319)
..++.+|||+|||+|.++..+++.|..+|+|+|+|+ |++.++++.. ++.... .++... .++...||.+.
T Consensus 35 ~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (232)
T 3opn_A 35 EINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADFEQGRPSFTS 108 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGCCSCCCSEEE
T ss_pred CCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHcCcCCCCEEE
Confidence 345679999999999999999999877999999999 9888765322 222211 112111 11111244444
Q ss_pred eccchhhhcchhhHHHHHHHHhcccCCCcEEEee
Q psy8709 274 SEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 274 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
++.++..+ ..++.++.++|||||.+++.
T Consensus 109 ~D~v~~~l------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 109 IDVSFISL------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp ECCSSSCG------GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEhhhH------HHHHHHHHHhccCCCEEEEE
Confidence 44332221 56889999999999999984
No 243
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.18 E-value=8.6e-13 Score=117.49 Aligned_cols=117 Identities=17% Similarity=0.232 Sum_probs=89.0
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.+++++. ..++++++.+|+.+++++
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcc
Confidence 4455666677777788899999999999999999986 6999999999 8888776654 136899999999988776
Q ss_pred C-CceeEEEeccchhhhcchhhHHHH----------H----HHHhcccCCCcEEEeecCc
Q psy8709 266 V-ESVDIIISEWMGYFLLFETMIDSV----------I----DARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 266 ~-~~fD~Iis~~~~~~l~~~~~~~~~----------l----~~~~r~LkpgG~li~~~~t 310 (319)
. ++| .|++|++++.. ......+ + +.+.++|+|||.+++....
T Consensus 91 ~~~~f-~vv~n~Py~~~--~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 91 NKQRY-KIVGNIPYHLS--TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp CSSEE-EEEEECCSSSC--HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred cCCCc-EEEEeCCcccc--HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 3 678 78888876532 1222222 2 5688999999998765543
No 244
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.18 E-value=6.1e-11 Score=105.57 Aligned_cols=113 Identities=18% Similarity=0.266 Sum_probs=86.6
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.+++++... ++++++++|+.++++
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKF 90 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCC
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCc
Confidence 46677888888888888999999999999999999986 5999999999 999998877532 589999999999877
Q ss_pred CC-CceeEEEeccchhhhcchhhHHHHH--------------HHHhcccCCCcEEE
Q psy8709 265 PV-ESVDIIISEWMGYFLLFETMIDSVI--------------DARNRFLKPDGVVC 305 (319)
Q Consensus 265 ~~-~~fD~Iis~~~~~~l~~~~~~~~~l--------------~~~~r~LkpgG~li 305 (319)
+. ..| .|++|.+++.. ...+..++ +.+.|+++|+|.+.
T Consensus 91 ~~~~~~-~vv~nlPy~~~--~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 91 PKNQSY-KIFGNIPYNIS--TDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp CSSCCC-EEEEECCGGGH--HHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred ccCCCe-EEEEeCCcccC--HHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 63 355 67888876532 12222332 33677888887654
No 245
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.18 E-value=4.3e-12 Score=115.21 Aligned_cols=114 Identities=14% Similarity=0.148 Sum_probs=78.1
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHH-HhcCCCCcEEEE--EcCccccccCCC
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDII-RKNKYDSQIEVY--HKLLEDVELPVE 267 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~-~~~g~~~~i~~i--~~d~~~~~~~~~ 267 (319)
.++.+.....++.+|||+|||+|.++..+++. .+|+|+|+++|+..+.+.. .......++.++ ++|+.+++ .+
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~ 147 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PF 147 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CC
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CC
Confidence 34444444567889999999999999999998 5899999999422221110 001111278999 89998765 57
Q ss_pred ceeEEEeccchhhhcch-hh-H--HHHHHHHhcccCCCc--EEEeecC
Q psy8709 268 SVDIIISEWMGYFLLFE-TM-I--DSVIDARNRFLKPDG--VVCPNRF 309 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~-~~-~--~~~l~~~~r~LkpgG--~li~~~~ 309 (319)
+||+|+|+.. ++.... .+ . ..+|..+.++||||| .|++...
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 8999999876 332111 11 1 137899999999999 8887543
No 246
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.18 E-value=3.7e-11 Score=113.35 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=87.5
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-- 263 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-- 263 (319)
+.+..++++.+... +.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|+++++.+++ ++++++.+|+.+..
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHH
Confidence 66667777666544 468999999999999998885 56999999999 99999999999998 68999999997752
Q ss_pred cCC--------------CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 264 LPV--------------ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 264 ~~~--------------~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
+.. .+||+|+.+++...+ ..++.+.|+++|.+++.+|+.
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---------CHHHHHHHTTSSEEEEEESCH
T ss_pred HhhccccccccccccccCCCCEEEECcCcccc---------HHHHHHHHhCCCEEEEEECCH
Confidence 221 379999999875321 123344566888888777764
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=2.6e-11 Score=115.79 Aligned_cols=117 Identities=14% Similarity=0.019 Sum_probs=89.3
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLED 261 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~ 261 (319)
+...+.+.+...+...++.+|||+|||+|.++..+++. +..+++|+|+++ +++.| .+++++++|+.+
T Consensus 23 TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLL 92 (421)
T ss_dssp CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGG
T ss_pred CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhh
Confidence 34666777777766556679999999999999999884 456999999999 76555 478999999987
Q ss_pred cccCCCceeEEEeccchhhhcc---------hh-----------------hHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 262 VELPVESVDIIISEWMGYFLLF---------ET-----------------MIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~---------~~-----------------~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
... .++||+|++|+++..... .. ....++..+.++|+|||.+++..+.-+
T Consensus 93 ~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~ 168 (421)
T 2ih2_A 93 WEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATW 168 (421)
T ss_dssp CCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred cCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHH
Confidence 653 368999999988654322 11 122678899999999999987766543
No 248
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.17 E-value=6.4e-11 Score=111.53 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=84.5
Q ss_pred HHHhcccc-cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 191 SAILNNKS-LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 191 ~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
..++..+. ..+..+|||||||+|.++..+++. +..+++++|+..+++.+++ .++++++.+|+.+ ++|..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~D~~~-~~p~~- 260 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ-------FPGVTHVGGDMFK-EVPSG- 260 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-------CTTEEEEECCTTT-CCCCC-
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhh-------cCCeEEEeCCcCC-CCCCC-
Confidence 34444444 556789999999999999999884 5569999999447665542 1589999999987 66643
Q ss_pred eeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 269 VDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
|+|++..+.|++. .+....+|+++++.|+|||++++....
T Consensus 261 -D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 261 -DTILMKWILHDWS-DQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp -SEEEEESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred -CEEEehHHhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999988877653 356678999999999999999876543
No 249
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=1.7e-10 Score=101.90 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=89.0
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
+.+...++.. .+..+|||+|||+|.++..+. +...|+|+|+++ +++.+++++..++. +..+..+|....+++
T Consensus 94 d~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~ 166 (253)
T 3frh_A 94 DTLYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA 166 (253)
T ss_dssp HHHHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC
T ss_pred HHHHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC
Confidence 4556666665 456799999999999999887 667999999999 99999999988874 789999999887766
Q ss_pred CCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 266 VESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
++||+|++.-+.|++.+... ...+ ++.+.|+++|+++ +..|-.
T Consensus 167 -~~~DvvLllk~lh~LE~q~~-~~~~-~ll~aL~~~~vvV-sfPtks 209 (253)
T 3frh_A 167 -EAGDLALIFKLLPLLEREQA-GSAM-ALLQSLNTPRMAV-SFPTRS 209 (253)
T ss_dssp -CBCSEEEEESCHHHHHHHST-THHH-HHHHHCBCSEEEE-EEECC-
T ss_pred -CCcchHHHHHHHHHhhhhch-hhHH-HHHHHhcCCCEEE-EcChHH
Confidence 69999999888888755433 2333 6666899987554 444333
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=8e-11 Score=107.72 Aligned_cols=91 Identities=18% Similarity=0.250 Sum_probs=79.1
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.+++++... ++++++++|+.++++
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDL 110 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCc
Confidence 35677788888888888999999999999999999984 5999999999 999999888732 589999999999888
Q ss_pred CCCceeEEEeccchhh
Q psy8709 265 PVESVDIIISEWMGYF 280 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~ 280 (319)
+..+||.|++|.+++.
T Consensus 111 ~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 111 NKLDFNKVVANLPYQI 126 (295)
T ss_dssp GGSCCSEEEEECCGGG
T ss_pred ccCCccEEEEeCcccc
Confidence 7678999999988764
No 251
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.15 E-value=8.8e-11 Score=104.67 Aligned_cols=112 Identities=10% Similarity=0.011 Sum_probs=90.2
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
+.+...++..+. +..+|||+|||+|.++..++.. +..+|+++|+++ +++.+++++..+|. +..+...|...-+.
T Consensus 120 D~fY~~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p 195 (281)
T 3lcv_B 120 DEFYRELFRHLP--RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRL 195 (281)
T ss_dssp HHHHHHHGGGSC--CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCC
T ss_pred HHHHHHHHhccC--CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCC
Confidence 566677776663 3579999999999999998885 778999999999 99999999999987 47888899877654
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
+ ++||+++++-+.+++..+.. ...+ ++...|+|+|+++
T Consensus 196 ~-~~~DvaL~lkti~~Le~q~k-g~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 196 D-EPADVTLLLKTLPCLETQQR-GSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp C-SCCSEEEETTCHHHHHHHST-THHH-HHHHHSSCSEEEE
T ss_pred C-CCcchHHHHHHHHHhhhhhh-HHHH-HHHHHhCCCCEEE
Confidence 4 88999999988888744322 2333 7888999998765
No 252
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.15 E-value=5.2e-11 Score=112.26 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=82.9
Q ss_pred HHHhcccc-cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 191 SAILNNKS-LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 191 ~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
..++..++ ..++.+|||+|||+|.++..+++. +..+++++|+ + +++.+++ . .+++++.+|+.+ ++|.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CCCC-
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc-CCCC-
Confidence 34444444 556789999999999999999985 3558999999 6 7766543 2 469999999987 5653
Q ss_pred ceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 268 SVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 268 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
||+|++..+.|++.. .....+++++++.|+|||++++...
T Consensus 268 -~D~v~~~~~lh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 268 -GDAMILKAVCHNWSD-EKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp -EEEEEEESSGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCEEEEecccccCCH-HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999999888776532 3345899999999999999997643
No 253
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.15 E-value=2.3e-10 Score=107.27 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=90.8
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCce
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESV 269 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~f 269 (319)
..++...+.....+|+|||||+|.++..+++. +..+++..|..++++.|++++...+ .++++++.+|+.+.+. ..+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--~~~ 245 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--PEA 245 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC---CCSEEEEESCTTTSCC--CCC
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc-cCceeeecCccccCCC--CCc
Confidence 44555566677789999999999999999884 5668999998668888888776554 4899999999976544 458
Q ss_pred eEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 270 DIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 270 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
|++++..+.|.+. .+....+|+++++.|+|||.+++...
T Consensus 246 D~~~~~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 246 DLYILARVLHDWA-DGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp SEEEEESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred eEEEeeeecccCC-HHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 9999988877653 35567899999999999999886543
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.15 E-value=4.1e-11 Score=115.80 Aligned_cols=125 Identities=11% Similarity=-0.007 Sum_probs=96.3
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc--------------CCCEEEEEecHH-HHHHHHHHHHhcCCC
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA--------------GAAKVFAIEKSD-IAYETIDIIRKNKYD 249 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--------------g~~~V~gvD~s~-~i~~a~~~~~~~g~~ 249 (319)
+...+.+.+.+.+...++.+|||+|||+|.+...+++. ...+++|+|+++ ++..|+.++..+|..
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 34566777777777777889999999999999888763 234799999999 999999998888874
Q ss_pred C-cEEEEEcCccccccCCCceeEEEeccchhhhcchh--------------hHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 250 S-QIEVYHKLLEDVELPVESVDIIISEWMGYFLLFET--------------MIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 250 ~-~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~--------------~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
. ++.+.++|....+.. ++||+|++|+++....... ....++..+.++|+|||++++-.++
T Consensus 235 ~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 3 678899998776544 5899999999875432111 1236889999999999998765543
No 255
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=2e-11 Score=112.34 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=74.0
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcCCCEEEEEec----HH-HHHHHHHHHHhcCCCCcEEEEEc-CccccccCCCcee
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEK----SD-IAYETIDIIRKNKYDSQIEVYHK-LLEDVELPVESVD 270 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~----s~-~i~~a~~~~~~~g~~~~i~~i~~-d~~~~~~~~~~fD 270 (319)
....++.+|||+|||+|.++..+++. .+|+|+|+ ++ +++.+. .+..+ .++++++.+ |+.+++ .++||
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCC
Confidence 33456789999999999999999998 48999999 44 332110 11111 157999999 887654 46899
Q ss_pred EEEeccchh---hhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 271 IIISEWMGY---FLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 271 ~Iis~~~~~---~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+|+|+.+.+ +.........+|..+.++|||||.|++...
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 999987643 221111112578889999999999997543
No 256
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.14 E-value=1.4e-11 Score=110.95 Aligned_cols=99 Identities=18% Similarity=0.071 Sum_probs=79.3
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHh--cCC-CCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRK--NKY-DSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~--~g~-~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
.+++|||+|||+|.++..+++.+ .+|+++|+++ +++.|++++.. .++ .++++++.+|..+.. ++||+|+++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 45799999999999999998886 8999999999 99988876532 111 358999999998754 7899999874
Q ss_pred chhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 277 MGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 277 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
. +...+++.+.+.|+|||++++...+.
T Consensus 148 ~--------dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 148 E--------PDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp C--------CCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred C--------ChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 2 12248999999999999999875443
No 257
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.11 E-value=8.6e-11 Score=111.53 Aligned_cols=103 Identities=15% Similarity=-0.001 Sum_probs=84.6
Q ss_pred CCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCc-EEEEEcCcccccc--CCCceeEEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQ-IEVYHKLLEDVEL--PVESVDIII 273 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~-i~~i~~d~~~~~~--~~~~fD~Ii 273 (319)
.++.+|||++||+|.+++.++.. |+.+|+++|+++ .++.+++|++.|++.++ ++++++|+.++.. ..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35689999999999999999984 557999999999 99999999999999666 9999999876532 135799999
Q ss_pred eccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 274 SEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 274 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+++.+ ....++..+.+.|+|||++++++.
T Consensus 131 lDP~g-------~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 131 LDPFG-------TPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp ECCSS-------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCCc-------CHHHHHHHHHHHhCCCCEEEEEec
Confidence 99831 123577788889999998887763
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.10 E-value=9.8e-11 Score=110.84 Aligned_cols=100 Identities=21% Similarity=0.107 Sum_probs=83.0
Q ss_pred CCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhc---------------CCCCcEEEEEcCccccc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKN---------------KYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~---------------g~~~~i~~i~~d~~~~~ 263 (319)
++.+|||+|||+|.++..++.. +..+|+++|+++ +++.+++|++.+ ++ .+++++++|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl-~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE-KTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS-SEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC-CceEEEcCcHHHHH
Confidence 6789999999999999999986 667899999999 999999999998 77 34999999997753
Q ss_pred c-CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 264 L-PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 264 ~-~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
. ..++||+|+.++++. ...++..+.+.|+|||+++++.
T Consensus 126 ~~~~~~fD~I~lDP~~~-------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDPFGS-------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECCSSC-------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCCCC-------HHHHHHHHHHhcCCCCEEEEEe
Confidence 2 135799999887532 2467788888999999888764
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.10 E-value=9.7e-11 Score=109.45 Aligned_cols=113 Identities=18% Similarity=0.146 Sum_probs=84.5
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcC---CC----CcEEEEEcCcccccc----CCCc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNK---YD----SQIEVYHKLLEDVEL----PVES 268 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g---~~----~~i~~i~~d~~~~~~----~~~~ 268 (319)
++++||++|||+|.++..+++.+..+|+++|+++ +++.|++++...+ +. ++++++.+|+..... +.++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5679999999999999999998778999999999 9999998864321 22 279999999987532 3578
Q ss_pred eeEEEeccch-hh------hcchhhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 269 VDIIISEWMG-YF------LLFETMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 269 fD~Iis~~~~-~~------l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
||+||++++. .. +...+-+..++..+.+.|+|||+++...++.++
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 9999998643 11 111222334444448999999999998887654
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.08 E-value=2.3e-10 Score=102.59 Aligned_cols=89 Identities=9% Similarity=0.160 Sum_probs=75.4
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.+++++.. .++++++++|+.+++++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHH
Confidence 5667778888888888999999999999999999986 5999999999 99999988765 26899999999988764
Q ss_pred C----CceeEEEeccchhh
Q psy8709 266 V----ESVDIIISEWMGYF 280 (319)
Q Consensus 266 ~----~~fD~Iis~~~~~~ 280 (319)
. ++|| |++|.+++.
T Consensus 91 ~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp GSCCSSCEE-EEEECCHHH
T ss_pred HhccCCCeE-EEecCCccc
Confidence 2 4688 888988653
No 261
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.08 E-value=2e-10 Score=107.37 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=80.1
Q ss_pred ccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEec
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISE 275 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~ 275 (319)
...++.+|||+|||+|.++..+++. +..+++++|+ + +++.+++ . .+++++.+|+.+ ++| .||+|++.
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEee
Confidence 3455689999999999999999985 4569999999 7 8776653 2 459999999976 555 39999998
Q ss_pred cchhhhcchhhHHHHHHHHhcccCC---CcEEEeecCc
Q psy8709 276 WMGYFLLFETMIDSVIDARNRFLKP---DGVVCPNRFT 310 (319)
Q Consensus 276 ~~~~~l~~~~~~~~~l~~~~r~Lkp---gG~li~~~~t 310 (319)
.+.|++.. .....+++++++.||| ||++++....
T Consensus 254 ~~lh~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 254 YILHNWTD-KDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp SCGGGSCH-HHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred hhhccCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 88776532 3445899999999999 9999876543
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.07 E-value=3.3e-10 Score=102.41 Aligned_cols=99 Identities=17% Similarity=0.183 Sum_probs=80.3
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP 265 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~ 265 (319)
..+.+.+.+.+...++ +|||+|||+|.++..+++.+ .+|+|+|+++ +++.+++++.. .+++++++|+.+++++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChh
Confidence 5677778888888888 99999999999999999986 5999999999 99999887652 5899999999988765
Q ss_pred C-CceeEEEeccchhhhcchhhHHHHHHH
Q psy8709 266 V-ESVDIIISEWMGYFLLFETMIDSVIDA 293 (319)
Q Consensus 266 ~-~~fD~Iis~~~~~~l~~~~~~~~~l~~ 293 (319)
. ..+|.|++|.+++. ..+.+.+++..
T Consensus 107 ~~~~~~~iv~NlPy~i--ss~il~~ll~~ 133 (271)
T 3fut_A 107 EVPQGSLLVANLPYHI--ATPLVTRLLKT 133 (271)
T ss_dssp GSCTTEEEEEEECSSC--CHHHHHHHHHH
T ss_pred hccCccEEEecCcccc--cHHHHHHHhcC
Confidence 3 36899999988653 23445555554
No 263
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.07 E-value=6.3e-11 Score=99.44 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=73.4
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc---CCCceeEE
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL---PVESVDII 272 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~---~~~~fD~I 272 (319)
+...++.+|||+|||. +++|+|+ |++.|+++.. .+++++.+|+.++++ +.++||+|
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEE
Confidence 4566789999999996 2399999 9999987753 248899999998876 67899999
Q ss_pred EeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 273 ISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 273 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++....+++. .+...++++++++|||||++++..
T Consensus 68 ~~~~~l~~~~--~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 68 LSGLVPGSTT--LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EECCSTTCCC--CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChhhhcc--cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 9987776651 335789999999999999999854
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.99 E-value=1.4e-09 Score=110.65 Aligned_cols=127 Identities=13% Similarity=-0.009 Sum_probs=97.1
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcC----------------------------------------
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAG---------------------------------------- 223 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g---------------------------------------- 223 (319)
+..+.+...++......++..|||.+||+|.+++.++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4457888888888888888999999999999998877631
Q ss_pred ---CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC--CCceeEEEeccchhhh-cchhhHHHHHHH---
Q psy8709 224 ---AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP--VESVDIIISEWMGYFL-LFETMIDSVIDA--- 293 (319)
Q Consensus 224 ---~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~--~~~fD~Iis~~~~~~l-~~~~~~~~~l~~--- 293 (319)
..+++|+|+++ +++.|+.|+..+|+.+.+++.++|+.++..+ .++||+|++|+++..- .....+..+.+.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 14799999999 9999999999999977899999999887544 2389999999986421 222344444444
Q ss_pred HhcccCCCcEEEeecCc
Q psy8709 294 RNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 294 ~~r~LkpgG~li~~~~t 310 (319)
+.+.+.|||.+++-+..
T Consensus 333 ~lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 333 IMKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHHCTTCEEEEEESC
T ss_pred HHHhhCCCCeEEEEeCC
Confidence 44455689998865544
No 265
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.96 E-value=6e-10 Score=104.36 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=79.0
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWM 277 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~ 277 (319)
..+..+|||||||+|.++..+++. +..+++++|++.+++.+++ . .+++++.+|+.+ ++| .||+|++..+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~v 260 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWV 260 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEccc
Confidence 345679999999999999999985 4558999999447665542 2 469999999987 555 4999999888
Q ss_pred hhhhcchhhHHHHHHHHhcccCC---CcEEEeecC
Q psy8709 278 GYFLLFETMIDSVIDARNRFLKP---DGVVCPNRF 309 (319)
Q Consensus 278 ~~~l~~~~~~~~~l~~~~r~Lkp---gG~li~~~~ 309 (319)
.|++.. .....+++++++.|+| ||++++...
T Consensus 261 lh~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 261 LHDWND-EQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp GGGSCH-HHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred ccCCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 776533 3455999999999999 999887544
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.92 E-value=1.7e-09 Score=106.92 Aligned_cols=127 Identities=10% Similarity=-0.084 Sum_probs=95.1
Q ss_pred ccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc----C---------------CCEEEEEecHH-HHHHHHHHH
Q psy8709 184 IRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA----G---------------AAKVFAIEKSD-IAYETIDII 243 (319)
Q Consensus 184 ~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~----g---------------~~~V~gvD~s~-~i~~a~~~~ 243 (319)
.+...+.+.+...+...++.+|+|.+||+|.+...+++. + ...++|+|+++ ++..|+.++
T Consensus 152 yTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl 231 (541)
T 2ar0_A 152 FTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNC 231 (541)
T ss_dssp CCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHH
Confidence 344566677777777777889999999999998877753 1 13799999999 999999998
Q ss_pred HhcCCCC----cEEEEEcCccccc-cCCCceeEEEeccchhhhcc-----------hhhHHHHHHHHhcccCCCcEEEee
Q psy8709 244 RKNKYDS----QIEVYHKLLEDVE-LPVESVDIIISEWMGYFLLF-----------ETMIDSVIDARNRFLKPDGVVCPN 307 (319)
Q Consensus 244 ~~~g~~~----~i~~i~~d~~~~~-~~~~~fD~Iis~~~~~~l~~-----------~~~~~~~l~~~~r~LkpgG~li~~ 307 (319)
..++... ++.+.++|....+ .+.++||+|++|+++..... ......++..+.+.|+|||++.+-
T Consensus 232 ~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 232 LLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp HTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 8888743 2788899986543 33468999999998654321 111236888999999999998765
Q ss_pred cCc
Q psy8709 308 RFT 310 (319)
Q Consensus 308 ~~t 310 (319)
.++
T Consensus 312 ~p~ 314 (541)
T 2ar0_A 312 VPD 314 (541)
T ss_dssp EEH
T ss_pred ecC
Confidence 543
No 267
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.91 E-value=1.6e-09 Score=98.79 Aligned_cols=98 Identities=18% Similarity=0.130 Sum_probs=71.8
Q ss_pred cccccCCCcceeeccCCC------chHHHHHHH-cC-CCEEEEEecHHHHHHHHHHHHhcCCCCcEEE-EEcCccccccC
Q psy8709 195 NNKSLFNNKHVIDVGAGT------GILSIFAAQ-AG-AAKVFAIEKSDIAYETIDIIRKNKYDSQIEV-YHKLLEDVELP 265 (319)
Q Consensus 195 ~~l~~~~~~~VLDiGcGt------G~ls~~la~-~g-~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~-i~~d~~~~~~~ 265 (319)
..+...++.+|||+|||+ |. ..+++ .+ ..+|+|+|+++. + .++++ +++|+.+.+++
T Consensus 57 ~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------v-~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 57 LTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------V-SDADSTLIGDCATVHTA 121 (290)
T ss_dssp SCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------B-CSSSEEEESCGGGCCCS
T ss_pred hhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------C-CCCEEEEECccccCCcc
Confidence 345667788999999954 66 33444 44 469999999993 1 36788 99999887655
Q ss_pred CCceeEEEeccchhhh--------cchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 266 VESVDIIISEWMGYFL--------LFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 266 ~~~fD~Iis~~~~~~l--------~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
++||+|+|+...++. ........+++++.++|||||.|++..
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 789999997542211 112345689999999999999999854
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=2e-09 Score=96.68 Aligned_cols=82 Identities=20% Similarity=0.094 Sum_probs=62.7
Q ss_pred ccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-H-------HHHHHHHHHhcCCCCcEEEEEcCcccc-c-cCC-
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-I-------AYETIDIIRKNKYDSQIEVYHKLLEDV-E-LPV- 266 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~-------i~~a~~~~~~~g~~~~i~~i~~d~~~~-~-~~~- 266 (319)
...++.+|||+|||+|.++..+++.+. +|+|+|+++ + ++.|+++++.+++.++++++++|+.++ + ++.
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 444568999999999999999999865 899999998 3 344555555556545699999999875 2 333
Q ss_pred -CceeEEEeccchhh
Q psy8709 267 -ESVDIIISEWMGYF 280 (319)
Q Consensus 267 -~~fD~Iis~~~~~~ 280 (319)
++||+|++++++..
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 68999999987654
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=3.7e-09 Score=95.91 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=71.9
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCC---EEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAA---KVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV 262 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~---~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~ 262 (319)
..+.+.+++.+...++.+|||||||+|.++..+++.+.. +|+|+|+++ +++.++++. ..+++++++|+.++
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 566777777788888899999999999999999987542 299999999 999998873 26899999999988
Q ss_pred ccCCC------ceeEEEeccchhh
Q psy8709 263 ELPVE------SVDIIISEWMGYF 280 (319)
Q Consensus 263 ~~~~~------~fD~Iis~~~~~~ 280 (319)
+++.- ....|++|.+++.
T Consensus 103 ~~~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 103 DFGSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp CGGGGSCSSSSCCEEEEEECCHHH
T ss_pred ChhHhcccccCCceEEEEccCccc
Confidence 76521 3457889988653
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.85 E-value=2.5e-09 Score=95.44 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=72.9
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL 264 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~ 264 (319)
...+.+.+.+.+...++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.++++ + ..+++++++|+.++++
T Consensus 16 d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 16 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPF 90 (249)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCCh
Confidence 3567778888888888899999999999999999998767999999999 88888765 1 2589999999998876
Q ss_pred CC--CceeEEEeccchh
Q psy8709 265 PV--ESVDIIISEWMGY 279 (319)
Q Consensus 265 ~~--~~fD~Iis~~~~~ 279 (319)
+. +.+ .|++|.+++
T Consensus 91 ~~~~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 91 CSLGKEL-KVVGNLPYN 106 (249)
T ss_dssp GGSCSSE-EEEEECCTT
T ss_pred hHccCCc-EEEEECchh
Confidence 53 234 788888865
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.85 E-value=3.3e-09 Score=97.26 Aligned_cols=87 Identities=13% Similarity=0.213 Sum_probs=70.9
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--c
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE--L 264 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~--~ 264 (319)
+.+.+++.+...++.+|||+|||+|.++..+++. +..+|+|+|.|+ +++.|++++..++ .+++++++|+.+++ +
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLL 91 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHH
Confidence 3444555556677889999999999999999986 356999999999 9999999988876 58999999998764 2
Q ss_pred C---CCceeEEEeccc
Q psy8709 265 P---VESVDIIISEWM 277 (319)
Q Consensus 265 ~---~~~fD~Iis~~~ 277 (319)
+ ..+||.|++++.
T Consensus 92 ~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 92 KTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHTTCSCEEEEEEECS
T ss_pred HhcCCCCCCEEEEcCc
Confidence 2 157999998764
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.82 E-value=2.5e-08 Score=86.03 Aligned_cols=99 Identities=10% Similarity=0.073 Sum_probs=77.3
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC--CCcEEEEEcCcccc---------------
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY--DSQIEVYHKLLEDV--------------- 262 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~--~~~i~~i~~d~~~~--------------- 262 (319)
+.++|||+|| |+-+..+++...++|+++|.++ ..+.|+++++..|+ .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4579999998 5777788875356999999999 99999999999998 78999999996542
Q ss_pred c--------c-CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 263 E--------L-PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 263 ~--------~-~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
+ . ..++||+|+.+.-.. ...+..+.++|+|||+++++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~--------~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR--------VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH--------HHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc--------hhHHHHHHHhcCCCeEEEEeCC
Confidence 1 1 136899999876311 2444556689999999998764
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.80 E-value=2.7e-09 Score=95.45 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=68.5
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCE--EEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAK--VFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~--V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
..+.+.+.+.+...++.+|||+|||+|.++. +.+ + .+ |+|+|+++ +++.+++++... ++++++++|+.+++
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCC
Confidence 4566677777777788899999999999999 655 3 36 99999999 998888765432 58999999999876
Q ss_pred cCC-----CceeEEEeccchh
Q psy8709 264 LPV-----ESVDIIISEWMGY 279 (319)
Q Consensus 264 ~~~-----~~fD~Iis~~~~~ 279 (319)
++. +..+.|++|.+++
T Consensus 81 ~~~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHHHHTSCEEEEEECCTT
T ss_pred HHHhhcccCCceEEEECCCCC
Confidence 542 2357999998854
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.77 E-value=2.2e-08 Score=98.87 Aligned_cols=126 Identities=10% Similarity=-0.102 Sum_probs=93.0
Q ss_pred cHHHHHHHHhcccc----cCCCcceeeccCCCchHHHHHHHc----CCCEEEEEecHH-HHHHHHHHHHhcCCC-CcEEE
Q psy8709 185 RTESYKSAILNNKS----LFNNKHVIDVGAGTGILSIFAAQA----GAAKVFAIEKSD-IAYETIDIIRKNKYD-SQIEV 254 (319)
Q Consensus 185 ~~~~~~~~i~~~l~----~~~~~~VLDiGcGtG~ls~~la~~----g~~~V~gvD~s~-~i~~a~~~~~~~g~~-~~i~~ 254 (319)
+...+.+.+...+. ..++.+|+|.+||+|.+...+++. +...++|+|+++ ++..|+.++..+|.. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 34555555555554 456779999999999998887774 346899999999 999999998888875 47899
Q ss_pred EEcCcccc--c-cCCCceeEEEeccchhhhcc-h------------------h-hHHHHHHHHhcccC-CCcEEEeecCc
Q psy8709 255 YHKLLEDV--E-LPVESVDIIISEWMGYFLLF-E------------------T-MIDSVIDARNRFLK-PDGVVCPNRFT 310 (319)
Q Consensus 255 i~~d~~~~--~-~~~~~fD~Iis~~~~~~l~~-~------------------~-~~~~~l~~~~r~Lk-pgG~li~~~~t 310 (319)
.++|.... + .+..+||+|++|+|+..-.. . . .--.++..+.+.|+ |||++.+-.+.
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99998765 2 34578999999998642110 0 0 01247889999999 99998654444
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.76 E-value=7.6e-09 Score=102.23 Aligned_cols=126 Identities=11% Similarity=-0.055 Sum_probs=91.5
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc--------C--------CCEEEEEecHH-HHHHHHHHHHh
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA--------G--------AAKVFAIEKSD-IAYETIDIIRK 245 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--------g--------~~~V~gvD~s~-~i~~a~~~~~~ 245 (319)
-.+...+.+.+...+...++ +|+|.+||+|.+...+++. . ...++|+|+++ ++..|+.++..
T Consensus 227 fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l 305 (544)
T 3khk_A 227 YYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI 305 (544)
T ss_dssp TCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH
Confidence 34456677777777665554 9999999999998776542 0 34899999999 99999999988
Q ss_pred cCCCCcEEEEEcCccccc-cCCCceeEEEeccchhhh-------------------------cchh-hHHHHHHHHhccc
Q psy8709 246 NKYDSQIEVYHKLLEDVE-LPVESVDIIISEWMGYFL-------------------------LFET-MIDSVIDARNRFL 298 (319)
Q Consensus 246 ~g~~~~i~~i~~d~~~~~-~~~~~fD~Iis~~~~~~l-------------------------~~~~-~~~~~l~~~~r~L 298 (319)
+|+..++.+.++|....+ .+..+||+|++|+|+..- .... .--.++..+.+.|
T Consensus 306 ~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~L 385 (544)
T 3khk_A 306 RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHL 385 (544)
T ss_dssp TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTE
T ss_pred hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHh
Confidence 888666555788875543 345789999999987531 0000 1125788899999
Q ss_pred CCCcEEEeecC
Q psy8709 299 KPDGVVCPNRF 309 (319)
Q Consensus 299 kpgG~li~~~~ 309 (319)
+|||++.+-.+
T Consensus 386 k~gGr~aiVlP 396 (544)
T 3khk_A 386 APTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCceEEEEec
Confidence 99999765543
No 276
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.76 E-value=7e-09 Score=98.76 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=66.7
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc--CCCCcEEEEEcCcccc-cc-CCCceeEEEec
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN--KYDSQIEVYHKLLEDV-EL-PVESVDIIISE 275 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~--g~~~~i~~i~~d~~~~-~~-~~~~fD~Iis~ 275 (319)
++.+|||+|||+|..+..+++.+. +|+++|+++ +++.|+++++.+ |+ ++++++++|+.+. +. +.++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 368999999999999999998865 999999999 999999999988 77 7899999999875 21 23589999999
Q ss_pred cchhh
Q psy8709 276 WMGYF 280 (319)
Q Consensus 276 ~~~~~ 280 (319)
++...
T Consensus 171 PPrr~ 175 (410)
T 3ll7_A 171 PARRS 175 (410)
T ss_dssp CEEC-
T ss_pred CCCcC
Confidence 87543
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.70 E-value=1.1e-08 Score=91.62 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=65.3
Q ss_pred HhcccccCCC--cceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc-------C-CCCcEEEEEcCccc
Q psy8709 193 ILNNKSLFNN--KHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN-------K-YDSQIEVYHKLLED 261 (319)
Q Consensus 193 i~~~l~~~~~--~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~-------g-~~~~i~~i~~d~~~ 261 (319)
+.+.+...++ .+|||+|||+|..+..+++.|. +|+++|.++ ++..++++++.. + +..+++++++|..+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 3334445556 8999999999999999999876 799999999 776666654321 2 22579999999987
Q ss_pred c-c-cCCCceeEEEeccchhh
Q psy8709 262 V-E-LPVESVDIIISEWMGYF 280 (319)
Q Consensus 262 ~-~-~~~~~fD~Iis~~~~~~ 280 (319)
+ + ++ ++||+|++++++..
T Consensus 157 ~L~~~~-~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 157 ALTDIT-PRPQVVYLDPMFPH 176 (258)
T ss_dssp HSTTCS-SCCSEEEECCCCCC
T ss_pred HHHhCc-ccCCEEEEcCCCCC
Confidence 5 2 33 47999999998754
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.69 E-value=4.3e-08 Score=91.83 Aligned_cols=117 Identities=19% Similarity=0.091 Sum_probs=91.3
Q ss_pred cccCCCcceeeccCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHhcCCC-----CcEEEEEcCccccc-cCCCc
Q psy8709 197 KSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSD-IAYETIDIIRKNKYD-----SQIEVYHKLLEDVE-LPVES 268 (319)
Q Consensus 197 l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~gvD~s~-~i~~a~~~~~~~g~~-----~~i~~i~~d~~~~~-~~~~~ 268 (319)
+...+|.+|||+++|.|.-+..++..+ ...|+++|+++ -+...+++++..+.. .++.+...|...+. ...+.
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 467788999999999999999998864 35799999999 888888888876542 57889999987764 34478
Q ss_pred eeEEEeccchhh----hcc----------h-------hhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 269 VDIIISEWMGYF----LLF----------E-------TMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 269 fD~Iis~~~~~~----l~~----------~-------~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
||.|+.+.+... ... . .....+|..+.++|||||+|+.++||+..
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 999998765321 110 1 11356788999999999999999999863
No 279
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.59 E-value=1.1e-07 Score=86.53 Aligned_cols=114 Identities=16% Similarity=0.180 Sum_probs=85.7
Q ss_pred CCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhc--C--CCCcEEEEEcCccccc-cCCCceeEE
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKN--K--YDSQIEVYHKLLEDVE-LPVESVDII 272 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~--g--~~~~i~~i~~d~~~~~-~~~~~fD~I 272 (319)
.+.++||-||.|.|..+..+++. +..+|+.+|+++ +++.+++.+... + -.++++++.+|....- ...++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 44579999999999999999996 567999999999 999998876431 1 1368999999998763 345789999
Q ss_pred Eeccchhhhcchh-hHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 273 ISEWMGYFLLFET-MIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 273 is~~~~~~l~~~~-~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
|.+..-..-.... .-..+++.+++.|+|||+++....+.++
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~ 203 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL 203 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSS
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCccc
Confidence 9875321110100 1246789999999999999987666554
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.58 E-value=8.4e-08 Score=85.90 Aligned_cols=117 Identities=14% Similarity=0.121 Sum_probs=76.2
Q ss_pred HHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 191 SAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 191 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
..+.+...+.++.+|||+|||+|.++..++.. +...++|+|++. +...... ....+ .++..+.++++...++.++
T Consensus 64 ~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g--~~ii~~~~~~dv~~l~~~~ 140 (277)
T 3evf_A 64 RWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLG--WNIITFKDKTDIHRLEPVK 140 (277)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTT--GGGEEEECSCCTTTSCCCC
T ss_pred HHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCC--CCeEEEeccceehhcCCCC
Confidence 33434455677789999999999999998875 667888888884 2100000 00011 1455567776555667789
Q ss_pred eeEEEeccchh---hhcchhhHHHHHHHHhcccCCC-cEEEeecCc
Q psy8709 269 VDIIISEWMGY---FLLFETMIDSVIDARNRFLKPD-GVVCPNRFT 310 (319)
Q Consensus 269 fD~Iis~~~~~---~l~~~~~~~~~l~~~~r~Lkpg-G~li~~~~t 310 (319)
||+|+|+.+.+ ..........++..+.++|+|| |.|++....
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99999987443 1111112223578889999999 999986544
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.54 E-value=1.5e-07 Score=95.69 Aligned_cols=114 Identities=8% Similarity=-0.033 Sum_probs=78.4
Q ss_pred CCCcceeeccCCCchHHHHHHHcC----CCEEEEEecHH-HHHHH--HHHHHhcCCC---CcEEEEEcCccccc-cCCCc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQAG----AAKVFAIEKSD-IAYET--IDIIRKNKYD---SQIEVYHKLLEDVE-LPVES 268 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~g----~~~V~gvD~s~-~i~~a--~~~~~~~g~~---~~i~~i~~d~~~~~-~~~~~ 268 (319)
.++.+|||.|||+|.+...+++.. ..+++|+|+++ ++..| +.++..+++. ....+...|+.... .+..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 356799999999999999988752 24799999999 88888 5444442221 22355566665532 23468
Q ss_pred eeEEEeccchhhhcc-h-------------------------hhHHHHHHHHhcccCCCcEEEeecCccee
Q psy8709 269 VDIIISEWMGYFLLF-E-------------------------TMIDSVIDARNRFLKPDGVVCPNRFTLSL 313 (319)
Q Consensus 269 fD~Iis~~~~~~l~~-~-------------------------~~~~~~l~~~~r~LkpgG~li~~~~t~~~ 313 (319)
||+|++|+|+..... . .....++..+.++|+|||++.+-.++-++
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 999999998732110 0 11345788889999999998876655444
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.43 E-value=9e-07 Score=80.14 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=82.1
Q ss_pred CCCcceeeccCCCchHHHHHHHc------CCCEEEEEecH--------------------------H-HHHHHHHHHHhc
Q psy8709 200 FNNKHVIDVGAGTGILSIFAAQA------GAAKVFAIEKS--------------------------D-IAYETIDIIRKN 246 (319)
Q Consensus 200 ~~~~~VLDiGcGtG~ls~~la~~------g~~~V~gvD~s--------------------------~-~i~~a~~~~~~~ 246 (319)
...+.|||+|+..|..+..++.. ...+|+++|.. + .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 44579999999999988887652 25689999953 1 356788999999
Q ss_pred CCC-CcEEEEEcCccccc--cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 247 KYD-SQIEVYHKLLEDVE--LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 247 g~~-~~i~~i~~d~~~~~--~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
|+. ++++++.|++.+.- ++.++||+|+.+.-.+ ......|..+...|+|||+++++...
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y-----~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY-----ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH-----HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc-----ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 984 89999999997642 3446899999876321 33456788999999999999998763
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.41 E-value=1.4e-06 Score=81.97 Aligned_cols=108 Identities=11% Similarity=0.073 Sum_probs=71.9
Q ss_pred CcceeeccCCCchHHHHHHHc----------------CCCEEEEEecHH-HHHHHHHHHHhcC-----------C--C-C
Q psy8709 202 NKHVIDVGAGTGILSIFAAQA----------------GAAKVFAIEKSD-IAYETIDIIRKNK-----------Y--D-S 250 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~----------------g~~~V~gvD~s~-~i~~a~~~~~~~g-----------~--~-~ 250 (319)
..+|+|+|||+|.++..+... +.-+|+..|+.. .....-+.+.... . . -
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999998876221 223677777766 4333333322210 0 0 0
Q ss_pred cEEEEEcCccccccCCCceeEEEeccchhhhcch-----------------------------------hhHHHHHHHHh
Q psy8709 251 QIEVYHKLLEDVELPVESVDIIISEWMGYFLLFE-----------------------------------TMIDSVIDARN 295 (319)
Q Consensus 251 ~i~~i~~d~~~~~~~~~~fD~Iis~~~~~~l~~~-----------------------------------~~~~~~l~~~~ 295 (319)
-+.-+.+.+..-.+|.++||+|+|+..+||+... .++..+|+.++
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222334444445788999999999999998621 15677899999
Q ss_pred cccCCCcEEEeecC
Q psy8709 296 RFLKPDGVVCPNRF 309 (319)
Q Consensus 296 r~LkpgG~li~~~~ 309 (319)
+.|+|||+++++..
T Consensus 213 ~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRGGAMFLVCL 226 (374)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEe
Confidence 99999999997654
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.32 E-value=1.7e-07 Score=84.01 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=74.6
Q ss_pred HHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCC
Q psy8709 190 KSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVE 267 (319)
Q Consensus 190 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~ 267 (319)
...+.+...+.++.+|||+|||.|.++..+++ .+...|+|+|++. +...+... .....++..+..++....++..
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv~~l~~~ 155 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDVFNMEVI 155 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCGGGSCCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---ccCCCceEEeeCCcchhhcCCC
Confidence 33444444667888999999999999999886 5777899999986 32111100 0011244444444443445668
Q ss_pred ceeEEEeccchh----hhcchhhHHHHHHHHhcccCCC--cEEEeecCc
Q psy8709 268 SVDIIISEWMGY----FLLFETMIDSVIDARNRFLKPD--GVVCPNRFT 310 (319)
Q Consensus 268 ~fD~Iis~~~~~----~l~~~~~~~~~l~~~~r~Lkpg--G~li~~~~t 310 (319)
++|+|+|+.+-+ .. .......+|.-+.++|+|| |.|++-...
T Consensus 156 ~~DvVLSDmApnsG~~~~-D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 156 PGDTLLCDIGESSPSIAV-EEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCSEEEECCCCCCSCHHH-HHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcCEEEecCccCCCChHH-HHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 999999986544 11 1111223577788999999 999865443
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.30 E-value=7.6e-07 Score=83.49 Aligned_cols=112 Identities=16% Similarity=0.137 Sum_probs=81.6
Q ss_pred CCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc---CC----CCcEEEEEcCccccc----cCCCc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN---KY----DSQIEVYHKLLEDVE----LPVES 268 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~---g~----~~~i~~i~~d~~~~~----~~~~~ 268 (319)
+.++||-+|.|.|.....+.+.+..+|+.+|+++ +++.+++.+... .+ .++++++.+|....- -..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 4579999999999999999998778999999999 999998865321 11 246899999986542 13468
Q ss_pred eeEEEeccchhhh-------cchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 269 VDIIISEWMGYFL-------LFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 269 fD~Iis~~~~~~l-------~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
||+||.+..-... ...---..+++.+++.|+|||+++....+.+
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~ 335 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 335 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc
Confidence 9999987421100 0011235788999999999999987654443
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.26 E-value=2.4e-06 Score=79.82 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=59.2
Q ss_pred cCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEeccch
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEWMG 278 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~~~ 278 (319)
+.+|.++||+||++|.++..+++.|. +|+|||+.+|-... ... ++|+++.+|+.....+..+||+|+|+...
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l----~~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSL----MDT---GQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHH----HTT---TCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhh----ccC---CCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 56789999999999999999999976 99999988733222 122 58999999998887776789999998764
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.23 E-value=1.6e-06 Score=77.47 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=69.4
Q ss_pred CCcceeeccCCCchHHHHHHHc-------CC------CEEEEEecHH----HHH-----------HHHHHHHhc------
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-------GA------AKVFAIEKSD----IAY-----------ETIDIIRKN------ 246 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-------g~------~~V~gvD~s~----~i~-----------~a~~~~~~~------ 246 (319)
+..+|||+|+|+|..+..+++. +. .+++++|..+ .+. .+++++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3469999999999988775542 21 4899999754 222 445555431
Q ss_pred ----CC---CCcEEEEEcCcccc-c-cCC---CceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEe
Q psy8709 247 ----KY---DSQIEVYHKLLEDV-E-LPV---ESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 247 ----g~---~~~i~~i~~d~~~~-~-~~~---~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
.+ ..+++++.+|+.+. + .+. ..||+|+.++....-.++---..++..+.++|+|||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 01 14788999998774 2 221 2799999875321111111135789999999999999984
No 288
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.22 E-value=1.7e-06 Score=81.55 Aligned_cols=108 Identities=12% Similarity=0.056 Sum_probs=69.5
Q ss_pred CcceeeccCCCchHHHHHHHc------------------CCCEEEEEecHH--H------HHHHHHHH-HhcCCCCcEEE
Q psy8709 202 NKHVIDVGAGTGILSIFAAQA------------------GAAKVFAIEKSD--I------AYETIDII-RKNKYDSQIEV 254 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~------------------g~~~V~gvD~s~--~------i~~a~~~~-~~~g~~~~i~~ 254 (319)
..+|+|+||++|..+..+... +.-+|+..|+.. . +....+.+ +..|...+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 368999999999998866553 123677777662 1 11111111 22222112345
Q ss_pred EEcCc---cccccCCCceeEEEeccchhhhcchh------------------------------------hHHHHHHHHh
Q psy8709 255 YHKLL---EDVELPVESVDIIISEWMGYFLLFET------------------------------------MIDSVIDARN 295 (319)
Q Consensus 255 i~~d~---~~~~~~~~~fD~Iis~~~~~~l~~~~------------------------------------~~~~~l~~~~ 295 (319)
+.+.. ..-.+|.+++|+|+|+..+||+...+ ++..+|+.+.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443 33467889999999999999975322 2334588889
Q ss_pred cccCCCcEEEeecC
Q psy8709 296 RFLKPDGVVCPNRF 309 (319)
Q Consensus 296 r~LkpgG~li~~~~ 309 (319)
+.|+|||+++++..
T Consensus 213 ~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 213 EELISRGRMLLTFI 226 (384)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhccCCeEEEEEe
Confidence 99999999997754
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.19 E-value=3e-06 Score=76.29 Aligned_cols=82 Identities=13% Similarity=0.140 Sum_probs=65.8
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc----
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE---- 263 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~---- 263 (319)
+.+.+++.+...++..+||.+||.|..+..+++. ..+|+|+|.++ +++.|++ +.. ++++++++++.++.
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHH
Confidence 3444555556677889999999999999999998 45999999999 8888887 533 58999999998874
Q ss_pred -cCCCceeEEEecc
Q psy8709 264 -LPVESVDIIISEW 276 (319)
Q Consensus 264 -~~~~~fD~Iis~~ 276 (319)
...++||.|+++.
T Consensus 84 ~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 84 ALGVERVDGILADL 97 (285)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred HcCCCCcCEEEeCC
Confidence 2235799999864
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.19 E-value=6.9e-06 Score=80.86 Aligned_cols=98 Identities=13% Similarity=0.012 Sum_probs=74.7
Q ss_pred CCcccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc----C----------CCEEEEEecHH-HHHHHHHHHHh
Q psy8709 181 GTPIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA----G----------AAKVFAIEKSD-IAYETIDIIRK 245 (319)
Q Consensus 181 ~~~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~----g----------~~~V~gvD~s~-~i~~a~~~~~~ 245 (319)
+.-.+...+.+.+...+...++.+|+|..||+|.+...+.+. . ...++|+|+++ +...|+-++-.
T Consensus 197 GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l 276 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL 276 (530)
T ss_dssp CCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH
T ss_pred ceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh
Confidence 344555778888888888888899999999999998776542 1 23699999999 88888888877
Q ss_pred cCCCCcEEEEEcCcccccc----CCCceeEEEeccchh
Q psy8709 246 NKYDSQIEVYHKLLEDVEL----PVESVDIIISEWMGY 279 (319)
Q Consensus 246 ~g~~~~i~~i~~d~~~~~~----~~~~fD~Iis~~~~~ 279 (319)
+|. +...+..+|....+. +..+||+|++|+|+.
T Consensus 277 hg~-~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 277 HGL-EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp HTC-SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSS
T ss_pred cCC-ccccccccccccCchhhhcccccceEEEecCCCC
Confidence 777 345677777755432 235799999999874
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.10 E-value=1.7e-05 Score=69.19 Aligned_cols=119 Identities=15% Similarity=0.114 Sum_probs=77.2
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEc-Cc
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHK-LL 259 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~-d~ 259 (319)
+.+.......+.+...+.++.+|||+||++|.++..++. .+..+|+|+|+-. -.+. -...+..|. +.++|+.+ |+
T Consensus 60 rSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv 137 (267)
T 3p8z_A 60 VSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDV 137 (267)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCG
T ss_pred cchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccce
Confidence 334444444555555677888999999999999998877 5777999999987 1100 001122344 67999999 98
Q ss_pred cccccCCCceeEEEeccchhhhcch---hhHHHHHHHHhcccCCCcEEEe
Q psy8709 260 EDVELPVESVDIIISEWMGYFLLFE---TMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 260 ~~~~~~~~~fD~Iis~~~~~~l~~~---~~~~~~l~~~~r~LkpgG~li~ 306 (319)
..++. .++|.|+|+..-..-..+ ..--.+|.-+.++|++ |.|++
T Consensus 138 ~~~~~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 138 FYLPP--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp GGCCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred eecCC--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 65543 679999997532111111 1112367777899999 66654
No 292
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.03 E-value=3.7e-06 Score=78.63 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=75.2
Q ss_pred CCcceeeccCCCchHHHHHHHc-----------------CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEE---EcCc
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-----------------GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVY---HKLL 259 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-----------------g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i---~~d~ 259 (319)
...+|+|+||++|..+..+... +.-+|+..|+.. ....+.+.+.......+..|+ .+.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999877644332 123788899888 666555554321100122343 3445
Q ss_pred cccccCCCceeEEEeccchhhhcc------------------------------hhhHHHHHHHHhcccCCCcEEEeecC
Q psy8709 260 EDVELPVESVDIIISEWMGYFLLF------------------------------ETMIDSVIDARNRFLKPDGVVCPNRF 309 (319)
Q Consensus 260 ~~~~~~~~~fD~Iis~~~~~~l~~------------------------------~~~~~~~l~~~~r~LkpgG~li~~~~ 309 (319)
..-.+|.+++|+|+|+...||+.. ..++..+|+.+.+.|+|||+++++..
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 445688899999999999999753 12466779999999999999997654
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.98 E-value=5.9e-06 Score=73.03 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=68.3
Q ss_pred cccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CC----CEEEEEe--cHHHHHHHHHHHHhcCCCCcEEEE
Q psy8709 183 PIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GA----AKVFAIE--KSDIAYETIDIIRKNKYDSQIEVY 255 (319)
Q Consensus 183 ~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~----~~V~gvD--~s~~i~~a~~~~~~~g~~~~i~~i 255 (319)
+.+......+|.+..-+.++.+|||+||+.|.++..+++. +. ..++|+| +.|+.. ...|. .-++|+
T Consensus 55 RSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~------~~~Gv-~~i~~~ 127 (269)
T 2px2_A 55 VSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM------QSYGW-NIVTMK 127 (269)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC------CSTTG-GGEEEE
T ss_pred ccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc------cCCCc-eEEEee
Confidence 3344333444444445677899999999999999999885 22 2455555 222000 00111 223555
Q ss_pred Ec-CccccccCCCceeEEEeccch---hhhcchhhHHHHHHHHhcccCCCc-EEEe
Q psy8709 256 HK-LLEDVELPVESVDIIISEWMG---YFLLFETMIDSVIDARNRFLKPDG-VVCP 306 (319)
Q Consensus 256 ~~-d~~~~~~~~~~fD~Iis~~~~---~~l~~~~~~~~~l~~~~r~LkpgG-~li~ 306 (319)
.+ |+.++. ..++|+|+|+..- +..........+|.-+.++|+||| .|++
T Consensus 128 ~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 128 SGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 57 997743 4689999997632 221111111126777779999999 7775
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.97 E-value=1.8e-05 Score=71.43 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=68.3
Q ss_pred cCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccCCCceeEEEecc
Q psy8709 199 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELPVESVDIIISEW 276 (319)
Q Consensus 199 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~fD~Iis~~ 276 (319)
+.++.+|||+||++|.++..+++. +...|+|+|+.. +...... . .....++......+....++.+++|+|+|+.
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~--~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M--QTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI 155 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c--cccCCceEEeecCceeeecCCCCcCEEeecC
Confidence 457789999999999999999984 677899999975 2100000 0 0001133333333333345557899999976
Q ss_pred chh---hhcchhhHHHHHHHHhcccCCC-cEEEeecCc
Q psy8709 277 MGY---FLLFETMIDSVIDARNRFLKPD-GVVCPNRFT 310 (319)
Q Consensus 277 ~~~---~l~~~~~~~~~l~~~~r~Lkpg-G~li~~~~t 310 (319)
.-+ +.........+|.-+.++|+|| |.|++-...
T Consensus 156 APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 156 GESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 544 1111112234577788999999 999975443
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.93 E-value=2.7e-05 Score=70.00 Aligned_cols=120 Identities=15% Similarity=0.128 Sum_probs=75.8
Q ss_pred cHHHHHHHHhcccccCCCcceeeccCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEc-Cccc
Q psy8709 185 RTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHK-LLED 261 (319)
Q Consensus 185 ~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~-d~~~ 261 (319)
+.......+.+...+.++.+|||+||++|.++..++. .|+.+|+|+|+.. -.+.- ...+..+. .-+.++.+ |+..
T Consensus 78 R~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~ 155 (321)
T 3lkz_A 78 RGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFY 155 (321)
T ss_dssp THHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTS
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhh
Confidence 3333444555556677888999999999999997777 5777999999987 11000 00011122 35788887 8766
Q ss_pred cccCCCceeEEEeccchhhhcch---hhHHHHHHHHhcccCCC-cEEEeec
Q psy8709 262 VELPVESVDIIISEWMGYFLLFE---TMIDSVIDARNRFLKPD-GVVCPNR 308 (319)
Q Consensus 262 ~~~~~~~fD~Iis~~~~~~l~~~---~~~~~~l~~~~r~Lkpg-G~li~~~ 308 (319)
++. .++|+|+|+..-..-... ..--.+|.-+.++|++| |-|++-.
T Consensus 156 l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 156 RPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp SCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 553 679999997531110111 11123677778999998 8777533
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.87 E-value=1.6e-05 Score=64.48 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=53.1
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCc-hHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTG-ILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE 263 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG-~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~ 263 (319)
+.+.+.+.+... ++.+|||||||.| ..+..+++ .|. .|+++|+++ .+. +++.|+.+..
T Consensus 23 e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~ 83 (153)
T 2k4m_A 23 NDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCC
T ss_pred HHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCc
Confidence 456666655542 3469999999999 69999997 776 899999999 322 8889987744
Q ss_pred cCC-CceeEEEe-ccc
Q psy8709 264 LPV-ESVDIIIS-EWM 277 (319)
Q Consensus 264 ~~~-~~fD~Iis-~~~ 277 (319)
+.. +.||+|.+ +++
T Consensus 84 ~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 84 MEIYRGAALIYSIRPP 99 (153)
T ss_dssp HHHHTTEEEEEEESCC
T ss_pred ccccCCcCEEEEcCCC
Confidence 321 48999975 443
No 297
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.77 E-value=4.3e-06 Score=75.32 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=94.9
Q ss_pred CCCCCeEEEecCCCChhhHHH---HhcC-----CceEEeeecCCCcccHHHHHHHHhcccccCCCcceeeccCCCchHHH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFA---AQAG-----AAKVFAIEKSGTPIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSI 217 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~a---a~~g-----a~~V~avd~d~~~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~ 217 (319)
--++-+++|--+|.|...+.. .+.| -.++... ..+.+..-..+.+.+.. .++..+||+-+|+|.+++
T Consensus 33 K~kp~~~iDTHAG~G~Y~L~~~~a~ktgE~~~GI~rl~~~-~~~~p~~l~~yf~~l~~----~n~~~~LDlfaGSGaLgi 107 (283)
T 2oo3_A 33 KDKPLFYLETHSGRGIYDLKDKQSLKTEEYKEGINPVWLD-RENLPSLFLEYISVIKQ----INLNSTLSYYPGSPYFAI 107 (283)
T ss_dssp SSSCCEEEESCCTTSEEETTCC----CCGGGGTHHHHHHT-GGGSCGGGHHHHHHHHH----HSSSSSCCEEECHHHHHH
T ss_pred CCCCeEEEEcCCCcCccCCCChHHhhcHHHHHHHHHHHhc-ccCCcHHHHHHHHHHHH----hcCCCceeEeCCcHHHHH
Confidence 346779999999999887632 2333 1111110 01122222334444433 345689999999999999
Q ss_pred HHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-c---cCCCceeEEEeccchhhhcchhhHHHHHH
Q psy8709 218 FAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-E---LPVESVDIIISEWMGYFLLFETMIDSVID 292 (319)
Q Consensus 218 ~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~---~~~~~fD~Iis~~~~~~l~~~~~~~~~l~ 292 (319)
.+.+. ..+++.+|.++ .++..+++++. ..++++++.|.... . .+..+||+|+.++++.. .....+++.
T Consensus 108 EaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~---k~~~~~vl~ 180 (283)
T 2oo3_A 108 NQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYER---KEEYKEIPY 180 (283)
T ss_dssp HHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCS---TTHHHHHHH
T ss_pred HHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCC---CcHHHHHHH
Confidence 99995 47999999999 65555555543 36899999997542 1 23457999999998642 134555555
Q ss_pred HHhc--ccCCCcEEEe
Q psy8709 293 ARNR--FLKPDGVVCP 306 (319)
Q Consensus 293 ~~~r--~LkpgG~li~ 306 (319)
.+.+ .+.|+|++++
T Consensus 181 ~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 181 AIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHHHHCTTSEEEE
T ss_pred HHHHhCccCCCeEEEE
Confidence 4443 5568888764
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.65 E-value=0.00011 Score=66.70 Aligned_cols=58 Identities=24% Similarity=0.223 Sum_probs=48.8
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhc
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKN 246 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~ 246 (319)
..+.+.++.... .++..|||++||+|.++..+++.|. +++|+|+++ +++.|++++...
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 456666665554 5678999999999999999999875 999999999 999999988764
No 299
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.59 E-value=5.3e-05 Score=71.31 Aligned_cols=30 Identities=70% Similarity=1.057 Sum_probs=28.2
Q ss_pred EEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 153 IDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 153 LD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
||+|||+|+++++||+.||++|+|+|.++.
T Consensus 88 LDvG~GtGiLs~~Aa~aGA~~V~ave~s~~ 117 (376)
T 4hc4_A 88 LDVGAGTGILSIFCAQAGARRVYAVEASAI 117 (376)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEEECSTT
T ss_pred EEeCCCccHHHHHHHHhCCCEEEEEeChHH
Confidence 899999999999999999999999998753
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.21 E-value=0.00062 Score=61.23 Aligned_cols=95 Identities=17% Similarity=0.102 Sum_probs=63.3
Q ss_pred cccCCCcceeeccC------CCchHHHHHHHcCC--CEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccCCCc
Q psy8709 197 KSLFNNKHVIDVGA------GTGILSIFAAQAGA--AKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELPVES 268 (319)
Q Consensus 197 l~~~~~~~VLDiGc------GtG~ls~~la~~g~--~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~~~~ 268 (319)
+..+.+.+|||+|+ ..|. ..+.+.+. ..|+++|+.++. .. .. .++++|....... .+
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~----------sd-a~-~~IqGD~~~~~~~-~k 169 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV----------SD-AD-STLIGDCATVHTA-NK 169 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB----------CS-SS-EEEESCGGGEEES-SC
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc----------cC-CC-eEEEccccccccC-CC
Confidence 44567889999997 4555 33444333 399999999921 01 12 4599998765543 78
Q ss_pred eeEEEeccc----hhhhc----chhhHHHHHHHHhcccCCCcEEEe
Q psy8709 269 VDIIISEWM----GYFLL----FETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 269 fD~Iis~~~----~~~l~----~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
||+|+|+.. ++.-. .....+.++.-+.+.|+|||.|++
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 999999753 22000 112456677788899999999984
No 301
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.20 E-value=0.00065 Score=59.43 Aligned_cols=42 Identities=26% Similarity=0.369 Sum_probs=36.4
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
...++++|||+|||+|.++..+++.|+.+|+|+|+++.....
T Consensus 34 ~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 34 LEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAW 75 (232)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCH
T ss_pred CCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHH
Confidence 345678999999999999999998898899999999876664
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.15 E-value=0.00073 Score=62.19 Aligned_cols=83 Identities=16% Similarity=0.192 Sum_probs=64.0
Q ss_pred HHHHHhcccccCCCcceeeccCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc--
Q psy8709 189 YKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE-- 263 (319)
Q Consensus 189 ~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~-- 263 (319)
+.+.++..+...++..++|..||.|..+..+++. +.++|+|+|.++ +++.++ ++ ..++++++++++.++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHH
Confidence 3445555666778899999999999999999985 356999999999 877773 32 2368999999998873
Q ss_pred cC---C-CceeEEEecc
Q psy8709 264 LP---V-ESVDIIISEW 276 (319)
Q Consensus 264 ~~---~-~~fD~Iis~~ 276 (319)
++ . +++|.|+.+.
T Consensus 120 L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 120 VAERDLIGKIDGILLDL 136 (347)
T ss_dssp HHHTTCTTCEEEEEEEC
T ss_pred HHhcCCCCcccEEEECC
Confidence 11 1 3699999864
No 303
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.14 E-value=0.00021 Score=64.00 Aligned_cols=55 Identities=29% Similarity=0.414 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 131 VRTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 131 ~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.+...+...+.......++.+|||+|||+|.++...+..|+ +++++|+++.....
T Consensus 40 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~ 94 (293)
T 3thr_A 40 SRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKY 94 (293)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred chHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHH
Confidence 34455555555444455789999999999999999998876 99999998655443
No 304
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.11 E-value=0.00039 Score=60.67 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=36.4
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccHH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~~ 187 (319)
..++.+|||+|||+|.+++.+++.+ +.+|+|+|+++.+....
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A 55 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSA 55 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHH
Confidence 3478899999999999999999888 77999999998766653
No 305
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.09 E-value=0.00087 Score=60.74 Aligned_cols=41 Identities=27% Similarity=0.343 Sum_probs=35.9
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..+++++||+|||||.++..+++.|+.+|+|+|++......
T Consensus 83 ~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 83 SVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVW 123 (291)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCH
T ss_pred CccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHH
Confidence 45788999999999999999988899999999998765543
No 306
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.08 E-value=0.00043 Score=61.14 Aligned_cols=42 Identities=24% Similarity=0.383 Sum_probs=36.4
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccHH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~~ 187 (319)
..++.+|||+|||+|.+++.+++.+ +.+|+|+|+++.+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A 61 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSA 61 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHH
Confidence 3478899999999999999999888 67899999998766653
No 307
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.07 E-value=0.00059 Score=59.73 Aligned_cols=42 Identities=26% Similarity=0.374 Sum_probs=36.5
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccHH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~~ 187 (319)
..++.+|+|+|||+|.+++.+++.+ +.+|+|+|+++.+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A 61 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSA 61 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHH
Confidence 3478899999999999999999888 77899999998766653
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.07 E-value=0.0009 Score=59.44 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=47.5
Q ss_pred HHHHHHHhcccccCCCcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCC
Q psy8709 187 ESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKY 248 (319)
Q Consensus 187 ~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~ 248 (319)
..+.+.++.... .++..|||..||+|..+..+.+.|. +++|+|+++ .++.++++++.+++
T Consensus 199 ~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 455555555543 5678999999999999999999865 999999999 99999999887653
No 309
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.04 E-value=0.0007 Score=60.76 Aligned_cols=51 Identities=29% Similarity=0.408 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeec-CCCc
Q psy8709 133 TESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEK-SGTP 183 (319)
Q Consensus 133 ~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~-d~~~ 183 (319)
+.....++.......++++|||+|||+|.+++.+++.|+.+|+++|+ ++..
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~ 115 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEI 115 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHH
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHH
Confidence 33445555556666789999999999999999999988889999999 6543
No 310
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.04 E-value=0.00085 Score=62.44 Aligned_cols=74 Identities=16% Similarity=0.144 Sum_probs=57.8
Q ss_pred HHHHHHHHhcccccCC------CcceeeccCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEc
Q psy8709 186 TESYKSAILNNKSLFN------NKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHK 257 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~------~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~ 257 (319)
...+.+.|.+.+.+.+ +..|||||.|.|.+|..+++. ..++|+++|+++ ++...++.. . .++++++.+
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~ 112 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKR 112 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECS
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEEC
Confidence 3566667776666543 578999999999999999985 356999999999 877776655 2 268999999
Q ss_pred Cccccc
Q psy8709 258 LLEDVE 263 (319)
Q Consensus 258 d~~~~~ 263 (319)
|+..+.
T Consensus 113 D~l~~~ 118 (353)
T 1i4w_A 113 DPYDWS 118 (353)
T ss_dssp CTTCHH
T ss_pred Cccchh
Confidence 996653
No 311
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.03 E-value=0.00055 Score=61.57 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=32.1
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
..+.++++|||+|||+|.++..+++. .+|+|+|+++.
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m 114 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTL 114 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECC
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchh
Confidence 44568899999999999999999877 68999999874
No 312
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.96 E-value=0.0013 Score=57.50 Aligned_cols=44 Identities=39% Similarity=0.551 Sum_probs=36.6
Q ss_pred HHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 139 AILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 139 ~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.+.......++++|||+|||+|.++..+++.+...++++|+++.
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~ 78 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSER 78 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHH
Confidence 34445556689999999999999999999888879999999753
No 313
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.96 E-value=0.02 Score=48.06 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=62.0
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccHH--HHHHHHhcccc--------c----CCCcceee
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRTE--SYKSAILNNKS--------L----FNNKHVID 207 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~~--~~~~~i~~~l~--------~----~~~~~VLD 207 (319)
.....++.+|||+|||+|.+++.+++.+ ..+++++|+++...... +....-...+. . ..-..|+.
T Consensus 35 ~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 114 (204)
T 3e05_A 35 KLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFI 114 (204)
T ss_dssp HTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEE
T ss_pred HcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEE
Confidence 3466789999999999999999999776 78999999987655442 22211111111 0 11123332
Q ss_pred ccCCCc--hHHHHHHH--cCCCEEEEEecHH-HHHHHHHHHHhcCC
Q psy8709 208 VGAGTG--ILSIFAAQ--AGAAKVFAIEKSD-IAYETIDIIRKNKY 248 (319)
Q Consensus 208 iGcGtG--~ls~~la~--~g~~~V~gvD~s~-~i~~a~~~~~~~g~ 248 (319)
-++... .+...+.+ .+.+.++..+... ..+...+.++..|+
T Consensus 115 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 115 GGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp SCCTTCHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred CCCCcCHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 222211 11122222 2344677776665 66677777778876
No 314
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=96.90 E-value=0.00062 Score=60.33 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=35.4
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++++|||+|||+|++++.++..|+.+|+|+|+++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~ 92 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNRE 92 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHH
Confidence 45688999999999999999888889889999999865444
No 315
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.90 E-value=0.0017 Score=57.39 Aligned_cols=40 Identities=28% Similarity=0.531 Sum_probs=35.1
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++++|||+|||+|.+++.+++.|+ +++++|+++.....
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~ 157 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQ 157 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHH
Confidence 45789999999999999999999888 99999998766554
No 316
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.79 E-value=0.0012 Score=55.06 Aligned_cols=40 Identities=30% Similarity=0.408 Sum_probs=34.5
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++++|||+|||+|.+++.++..++.+|+++|+++.....
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~ 82 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAV 82 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHH
Confidence 5789999999999999998888888999999998654443
No 317
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.78 E-value=0.00092 Score=60.97 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=29.2
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeec
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEK 179 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~ 179 (319)
..+.++++|||+|||+|.++..+++. ..|+++|+
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~ 111 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKG 111 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEE
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEec
Confidence 33557899999999999999999977 58999998
No 318
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.76 E-value=0.0013 Score=54.49 Aligned_cols=41 Identities=24% Similarity=0.335 Sum_probs=34.7
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.+.++.+|||+|||+|.+++.+++. +.+|+++|+++.....
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~ 59 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGK 59 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHH
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHH
Confidence 3568899999999999999999977 7899999998655443
No 319
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=96.72 E-value=0.0015 Score=57.72 Aligned_cols=44 Identities=27% Similarity=0.367 Sum_probs=37.0
Q ss_pred HHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 140 ILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 140 i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
+.......++.+|||+|||+|.++..++..++.+++++|++...
T Consensus 23 iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~ 66 (249)
T 3ftd_A 23 IAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREM 66 (249)
T ss_dssp HHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHH
T ss_pred HHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHH
Confidence 34445567889999999999999999998888999999998643
No 320
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.69 E-value=0.0016 Score=53.64 Aligned_cols=40 Identities=33% Similarity=0.429 Sum_probs=34.3
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
..++++|||+|||+|.+++.+++.+..+++++|+++....
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~ 68 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQA 68 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 5678899999999999999998878889999999854433
No 321
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.65 E-value=0.0018 Score=58.31 Aligned_cols=41 Identities=39% Similarity=0.388 Sum_probs=35.8
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..+|++|||+|||+|.+++.+++.|+.+|+++|+++.....
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~ 163 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKF 163 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHH
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHH
Confidence 45899999999999999999999999999999998654443
No 322
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.63 E-value=0.0025 Score=54.22 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=35.4
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
....++.+|||+|||+|.+++.+++. +.+|+++|+++.....
T Consensus 51 l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~ 92 (204)
T 3njr_A 51 LAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIEN 92 (204)
T ss_dssp HCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHH
T ss_pred cCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHH
Confidence 35668899999999999999999987 7789999998755443
No 323
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.53 E-value=0.0019 Score=54.85 Aligned_cols=39 Identities=28% Similarity=0.224 Sum_probs=33.3
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++.++..++..|+++|+++.....
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~ 91 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQ 91 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHH
Confidence 678999999999999998887788899999998654443
No 324
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.53 E-value=0.002 Score=53.08 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=31.4
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++++|||+|||+|.+++.+++.+ +++|+|+++...
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~ 57 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRAL 57 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHH
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHH
Confidence 467899999999999999999888 999999986443
No 325
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.53 E-value=0.0057 Score=52.03 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 132 RTESYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 132 r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
+...+...+..... ++.+|||+|||+|.++..++..+. +++++|+++...
T Consensus 24 ~~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~ 73 (227)
T 1ve3_A 24 RIETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMI 73 (227)
T ss_dssp HHHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHH
Confidence 34444454544433 488999999999999999988877 899999985443
No 326
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.52 E-value=0.0025 Score=54.62 Aligned_cols=39 Identities=26% Similarity=0.417 Sum_probs=32.2
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTP 183 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~ 183 (319)
.+.++.+|||+|||+|.++..++.. +..+|+|+|+++..
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~ 93 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKP 93 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHH
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHH
Confidence 4568899999999999999887754 46799999998653
No 327
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.51 E-value=0.0027 Score=53.61 Aligned_cols=41 Identities=37% Similarity=0.469 Sum_probs=35.1
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++++|||+|||+|.+++.+++.|+..++++|+++....
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~ 86 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVD 86 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 45678999999999999999999888889999999865443
No 328
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.50 E-value=0.0039 Score=51.38 Aligned_cols=41 Identities=29% Similarity=0.435 Sum_probs=34.8
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++++|||+|||+|.+++.+++.++.+++++|+++.....
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~ 82 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKV 82 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHH
Confidence 46889999999999999998888888899999998654433
No 329
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.50 E-value=0.0039 Score=50.99 Aligned_cols=40 Identities=30% Similarity=0.457 Sum_probs=34.2
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++.+|||+|||+|.++..+++ +..+++++|+++....
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~ 71 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIE 71 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHH
Confidence 456888999999999999999998 8889999999865443
No 330
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.50 E-value=0.012 Score=54.15 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=83.1
Q ss_pred HHHHHHHHhcccccCCCcceeeccCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHhcC-----------------
Q psy8709 186 TESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSDIAYETIDIIRKNK----------------- 247 (319)
Q Consensus 186 ~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~gvD~s~~i~~a~~~~~~~g----------------- 247 (319)
+..+-+.+...+...+...|+.+|||.......+... +...++-||..++++.-++.+...+
T Consensus 82 t~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~ 161 (334)
T 1rjd_A 82 TVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSP 161 (334)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccc
Confidence 3333333333333244579999999999999888874 4458889998667666666666542
Q ss_pred ---CCCcEEEEEcCcccccc---------CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEE-eec
Q psy8709 248 ---YDSQIEVYHKLLEDVEL---------PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVC-PNR 308 (319)
Q Consensus 248 ---~~~~i~~i~~d~~~~~~---------~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li-~~~ 308 (319)
..++.+++..|+.+... ......+++++.+..++.. +....+++.+.... |+|.++ ++.
T Consensus 162 ~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~-~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 162 FLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHN-NESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp EEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCH-HHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred cccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCH-HHHHHHHHHHHhhC-CCcEEEEEec
Confidence 13689999999987421 2246789999998887644 66788888888876 666654 544
No 331
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.49 E-value=0.0041 Score=54.57 Aligned_cols=46 Identities=24% Similarity=0.322 Sum_probs=37.2
Q ss_pred HHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 138 SAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 138 ~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
..+.......++.+|||+|||+|.++..++..+ .+++++|++....
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~ 65 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLC 65 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHH
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHH
Confidence 344455566788999999999999999999777 7899999986443
No 332
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.48 E-value=0.0024 Score=57.52 Aligned_cols=41 Identities=22% Similarity=0.451 Sum_probs=34.5
Q ss_pred CCCCCCeEEEecCCCChhhHHHHh-cCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~-~ga~~V~avd~d~~~~~ 185 (319)
.++++++|||+|||+|.+++.++. +++.+++|+|++.....
T Consensus 43 ~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~ 84 (292)
T 3g07_A 43 EWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIH 84 (292)
T ss_dssp GGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHH
T ss_pred hhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 456899999999999999999885 57889999999865443
No 333
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.47 E-value=0.0036 Score=55.77 Aligned_cols=42 Identities=24% Similarity=0.187 Sum_probs=34.6
Q ss_pred HhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 141 LNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 141 ~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
.....+.++.+|||+|||+|.+++.+++.|+ +|+++|+++..
T Consensus 38 l~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~m 79 (261)
T 3iv6_A 38 IFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRM 79 (261)
T ss_dssp HHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHH
T ss_pred HHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHH
Confidence 3345677899999999999999999998764 89999987543
No 334
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.45 E-value=0.0022 Score=54.48 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=34.0
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.+.++.+|||+|||+|..+...++.|. .|+|+|+++.....
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~ 59 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVER 59 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 345788999999999999999888765 89999998665544
No 335
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.41 E-value=0.0041 Score=54.76 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=34.0
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~~ 186 (319)
..++.+|||+|||+|..++.++.. +..+|+++|++......
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~ 119 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAF 119 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 356889999999999999998865 57899999998655443
No 336
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.41 E-value=0.0025 Score=54.10 Aligned_cols=39 Identities=26% Similarity=0.208 Sum_probs=33.3
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++.++..++.+|+++|+++.....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~ 92 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQ 92 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHH
Confidence 678999999999999998887788899999998654443
No 337
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.39 E-value=0.0043 Score=50.71 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=34.6
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCccc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~ 185 (319)
....++.+|||+|||+|.+++.+++. +..+++++|+++....
T Consensus 21 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~ 63 (178)
T 3hm2_A 21 LAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRE 63 (178)
T ss_dssp HCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHH
T ss_pred hcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 35678899999999999999998855 5789999999865443
No 338
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.38 E-value=0.0044 Score=52.08 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=30.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.+++.+++.+ ..+++++|+++.....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~ 69 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAV 69 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 688999999999999999999776 6699999998765443
No 339
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.36 E-value=0.0037 Score=55.46 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=34.9
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.....++.+|||+|||+|.++...+..+ .+|+++|++.....
T Consensus 24 ~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~ 65 (255)
T 3tqs_A 24 AIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVA 65 (255)
T ss_dssp HHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHH
T ss_pred hcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHH
Confidence 3456688999999999999999999876 78999999865443
No 340
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.36 E-value=0.0089 Score=56.03 Aligned_cols=72 Identities=24% Similarity=0.077 Sum_probs=55.6
Q ss_pred cceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc--------CCCceeEEE
Q psy8709 203 KHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL--------PVESVDIII 273 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~--------~~~~fD~Ii 273 (319)
.+++|+.||.|.++.-+.+.|...+.++|+++ .++..+ .|- .+..++.+|+.++.. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~----~N~--~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHA----INF--PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHH----HHC--TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHH----HhC--CCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 57999999999999999999987889999999 444333 332 356788999987631 236799999
Q ss_pred eccchhh
Q psy8709 274 SEWMGYF 280 (319)
Q Consensus 274 s~~~~~~ 280 (319)
..+++..
T Consensus 77 ggpPCQ~ 83 (376)
T 3g7u_A 77 GGPPCQG 83 (376)
T ss_dssp ECCCCCT
T ss_pred ecCCCCC
Confidence 8887543
No 341
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.34 E-value=0.0035 Score=52.70 Aligned_cols=41 Identities=32% Similarity=0.421 Sum_probs=34.6
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++++|||+|||+|.+++.++..+..+++++|+++....
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~ 88 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIE 88 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 34578899999999999999999888889999999864433
No 342
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.33 E-value=0.0046 Score=53.87 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=35.7
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
-..+.++.+|||+|||+|.++..+++.+..+++++|+++....
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~ 83 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIE 83 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHH
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 3456788899999999999999999877669999999865443
No 343
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.32 E-value=0.014 Score=55.30 Aligned_cols=45 Identities=18% Similarity=0.441 Sum_probs=36.9
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHH-hcCCceEEeeecCCCcccH
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAA-QAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa-~~ga~~V~avd~d~~~~~~ 186 (319)
....+.++.+|||+|||+|.+.+.++ ..++.+++|+|+++.....
T Consensus 167 ~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lel 212 (438)
T 3uwp_A 167 DEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKY 212 (438)
T ss_dssp HHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 33467799999999999999999988 5677789999998755443
No 344
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.30 E-value=0.0026 Score=56.92 Aligned_cols=41 Identities=39% Similarity=0.388 Sum_probs=35.4
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++++|||+|||+|.+++.+++.++.+|+++|+++.....
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~ 163 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKF 163 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHH
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 34689999999999999999999987799999998765544
No 345
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.30 E-value=0.0042 Score=54.35 Aligned_cols=41 Identities=10% Similarity=0.279 Sum_probs=35.0
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHh-cC-CceEEeeecCCC
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQ-AG-AAKVFAIEKSGT 182 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~-~g-a~~V~avd~d~~ 182 (319)
.+..+.||.+|||+|||+|.++..+++ .| ..+|+|+|+++.
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~ 113 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPR 113 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHH
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHH
Confidence 356689999999999999999999884 46 789999999754
No 346
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.27 E-value=0.012 Score=50.95 Aligned_cols=44 Identities=23% Similarity=0.399 Sum_probs=34.2
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
......++.+|||+|||+|.++...++.| ..++++|+++.....
T Consensus 35 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~ 78 (252)
T 1wzn_A 35 KEDAKREVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRV 78 (252)
T ss_dssp HHTCSSCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHH
T ss_pred HHhcccCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHH
Confidence 33344577899999999999999998875 489999998654433
No 347
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.27 E-value=0.05 Score=49.55 Aligned_cols=107 Identities=8% Similarity=0.062 Sum_probs=79.4
Q ss_pred cceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcC--CCCcEEEEEcCccccc---------cCCCceeE
Q psy8709 203 KHVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNK--YDSQIEVYHKLLEDVE---------LPVESVDI 271 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g--~~~~i~~i~~d~~~~~---------~~~~~fD~ 271 (319)
..|+++|||--.....+......+++-+|....+...++.+...+ ...+.+++..|+.+ . +....--+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEE
Confidence 479999999877655554322358999996448888888887543 24678899999876 2 11234567
Q ss_pred EEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCcc
Q psy8709 272 IISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFTL 311 (319)
Q Consensus 272 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t~ 311 (319)
++++.+.+++.. +....+++.+...+.||+.++++..+.
T Consensus 183 ~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 183 WLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp EEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred EEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 778888888765 577889999999999999999998764
No 348
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.26 E-value=0.0036 Score=50.72 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=32.4
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++++|||+|||+|.++..+++.++. ++++|+++.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~ 78 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRL 78 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHH
Confidence 6789999999999999999988876 9999998654433
No 349
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.25 E-value=0.0074 Score=50.21 Aligned_cols=37 Identities=30% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc-CC---------ceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA-GA---------AKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~-ga---------~~V~avd~d~~ 182 (319)
+.++.+|||+|||+|.++..+++. ++ .+++++|+++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 567899999999999999998865 65 79999999874
No 350
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.24 E-value=0.0045 Score=52.17 Aligned_cols=39 Identities=38% Similarity=0.550 Sum_probs=33.8
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.++++|||+|||+|.++..+++.+..+++++|+++....
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~ 97 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMT 97 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 478899999999999999999888889999999865433
No 351
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.23 E-value=0.0062 Score=50.05 Aligned_cols=41 Identities=29% Similarity=0.402 Sum_probs=34.6
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
....++.+|||+|||+|.++..+++.+ .+++++|.++....
T Consensus 29 ~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~ 69 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAIS 69 (192)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHH
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHH
Confidence 356788999999999999999999877 89999999764443
No 352
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.23 E-value=0.0061 Score=55.23 Aligned_cols=48 Identities=27% Similarity=0.387 Sum_probs=38.6
Q ss_pred HHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 138 SAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 138 ~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..+.......++.+|||+|||+|.++..++.. +.+|+++|++......
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~ 87 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPY 87 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHH
Confidence 33444456778999999999999999999877 5799999999765544
No 353
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.22 E-value=0.0072 Score=50.93 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=32.1
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
+.++.+|||+|||+|.++..+++. ...|+|+|+++.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~ 58 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM 58 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc
Confidence 457899999999999999999977 779999999864
No 354
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.21 E-value=0.0044 Score=55.47 Aligned_cols=41 Identities=37% Similarity=0.407 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
....++ +|||+|||+|.++...+..+ .+|+++|++......
T Consensus 43 ~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~ 83 (271)
T 3fut_A 43 ARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPV 83 (271)
T ss_dssp HCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHH
T ss_pred cCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHH
Confidence 356678 99999999999999999877 689999998765443
No 355
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.20 E-value=0.0066 Score=52.37 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=33.5
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCC
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGT 182 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~ 182 (319)
...+.++.+|||+|||+|.++..+++. |..+|+++|+++.
T Consensus 69 ~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~ 109 (230)
T 1fbn_A 69 VMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPR 109 (230)
T ss_dssp CCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHH
T ss_pred ccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHH
Confidence 344568899999999999999988865 6789999999854
No 356
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.18 E-value=0.005 Score=54.19 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=35.4
Q ss_pred CCC-CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 145 SLF-NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~-~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
... ++.+|||+|||+|.+++.+++.+...++++|+++.....
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~ 87 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADM 87 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHH
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHH
Confidence 344 789999999999999999998887799999998655444
No 357
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.17 E-value=0.0037 Score=54.31 Aligned_cols=39 Identities=23% Similarity=0.264 Sum_probs=32.0
Q ss_pred CCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~ 185 (319)
.++.+|||+|||+|.+++..+.. ...+|+++|+++....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~ 108 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRIT 108 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 46789999999999999998854 4678999999864433
No 358
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.15 E-value=0.0069 Score=53.27 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=35.3
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.+.++.+|||+|||+|.++..+++.+..+++++|+++....
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~ 83 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFID 83 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHH
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHH
Confidence 46789999999999999999999888889999999865443
No 359
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.14 E-value=0.0084 Score=52.13 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=35.8
Q ss_pred HhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 141 LNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 141 ~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.....+.++.+|||+|||+|.++...+.....+++++|+++.....
T Consensus 29 ~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~ 74 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQ 74 (256)
T ss_dssp HHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 3344577899999999999999998886545689999997654433
No 360
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.13 E-value=0.0098 Score=50.31 Aligned_cols=46 Identities=11% Similarity=0.038 Sum_probs=35.9
Q ss_pred HHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 136 YKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 136 ~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
+...+.......++.+|||+|||+|.++...+..+ .+++++|+++.
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~ 84 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPR 84 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHH
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHH
Confidence 33444444556688999999999999999998776 58999999754
No 361
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.13 E-value=0.0087 Score=52.62 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=38.3
Q ss_pred HHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 137 KSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 137 ~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...+.....+.++.+|||+|||+|.++..+++....+++++|+++....
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~ 98 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVN 98 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 3444455567789999999999999999988655689999999865443
No 362
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.13 E-value=0.0059 Score=57.35 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=36.3
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTE 187 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~ 187 (319)
.++++|||+|||+|.+++.+++.|+.+|+++|+++......
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A 251 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALS 251 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence 57889999999999999999998999999999997765553
No 363
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.11 E-value=0.0077 Score=57.52 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=37.9
Q ss_pred HHhcCCCCCCCeEEEecCCCChhhHHHHh-cCCceEEeeecCCCcccH
Q psy8709 140 ILNNNSLFNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 140 i~~n~~~~~~~~vLD~G~GsG~l~i~aa~-~ga~~V~avd~d~~~~~~ 186 (319)
+.....+.++.+|||+|||+|.+++.+++ .++.+++|+|++......
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~ 281 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDL 281 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHH
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 33445677899999999999999999986 577899999998765443
No 364
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.10 E-value=0.0024 Score=63.12 Aligned_cols=79 Identities=18% Similarity=0.176 Sum_probs=48.7
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccHHHHHHHHhcccccCCCcceeeccCCCchHHHHHH-HcCCCE
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRTESYKSAILNNKSLFNNKHVIDVGAGTGILSIFAA-QAGAAK 226 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~~~~~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la-~~g~~~ 226 (319)
.+-+|||+|||.|+++...|+.|+ .|+|+|..+..+........- .+..=++.=||+-.-..... ...+.-
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~-------~~~~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEE-------NPDFAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHT-------STTSEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHh-------cCCCceEEEECCHHHHhhhccCCCccE
Confidence 456899999999999999999987 599999986554443322211 11112355555542211111 123567
Q ss_pred EEEEecHH
Q psy8709 227 VFAIEKSD 234 (319)
Q Consensus 227 V~gvD~s~ 234 (319)
|++.+.-+
T Consensus 138 v~~~e~~e 145 (569)
T 4azs_A 138 AIGLSVFH 145 (569)
T ss_dssp EEEESCHH
T ss_pred EEECcchh
Confidence 88887665
No 365
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.10 E-value=0.0054 Score=52.13 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=31.6
Q ss_pred CCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTP 183 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~ 183 (319)
.++++|||+|||+|.++..+++.+ ...++++|+++..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~ 65 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRS 65 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHH
Confidence 467899999999999999998765 5799999998543
No 366
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.09 E-value=0.0046 Score=54.12 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=34.8
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
....++.+|||+|||+|.++..++..+ .+++++|++.....
T Consensus 25 ~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~ 65 (245)
T 1yub_A 25 LNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFN 65 (245)
T ss_dssp CCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSS
T ss_pred cCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHH
Confidence 456688999999999999999999776 78999999875543
No 367
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.08 E-value=0.0058 Score=53.96 Aligned_cols=39 Identities=26% Similarity=0.195 Sum_probs=33.1
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|..+...++.|. .|+|+|+++.....
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIRE 105 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHH
Confidence 4788999999999999999998876 89999998665443
No 368
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.08 E-value=0.0087 Score=50.05 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc-C--CceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA-G--AAKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~-g--a~~V~avd~d~~ 182 (319)
+.++.+|||+|||+|.++..+++. + ..+++|+|+++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 457889999999999999998854 4 589999999874
No 369
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.08 E-value=0.0069 Score=50.92 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++.+|||+|||+|.++..+++.+...++++|+++...
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~ 78 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVV 78 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHH
Confidence 57889999999999999999988877999999975443
No 370
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.04 E-value=0.005 Score=52.40 Aligned_cols=40 Identities=23% Similarity=0.320 Sum_probs=33.9
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCccc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIR 185 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~ 185 (319)
..++.+|||+|||+|.++..+++.. ..+++++|+++....
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~ 65 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRME 65 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGH
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 4578899999999999999988665 789999999875444
No 371
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.04 E-value=0.0053 Score=52.17 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=31.5
Q ss_pred CCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~ 185 (319)
.+..+|||+|||+|.+++..+.. ...+++|+|++.....
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~le 87 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIA 87 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHH
Confidence 46889999999999999999866 2349999999854433
No 372
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.02 E-value=0.011 Score=52.94 Aligned_cols=46 Identities=20% Similarity=0.240 Sum_probs=36.8
Q ss_pred HHHHhcCCCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcc
Q psy8709 138 SAILNNNSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPI 184 (319)
Q Consensus 138 ~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~ 184 (319)
..+.....+.++.+|||+|||+|.++..+++. | .+++++|+++...
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~ 108 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQY 108 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHH
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHH
Confidence 33445556778999999999999999999866 6 7899999975443
No 373
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.02 E-value=0.005 Score=55.35 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=34.7
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCc---eEEeeecCCCcccH
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAA---KVFAIEKSGTPIRT 186 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~---~V~avd~d~~~~~~ 186 (319)
....++.+|||+|||+|.++...+..+.. +|+++|++......
T Consensus 38 ~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~ 83 (279)
T 3uzu_A 38 IRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGR 83 (279)
T ss_dssp HCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHH
T ss_pred cCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHH
Confidence 35668899999999999999999877644 49999998655444
No 374
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.01 E-value=0.0054 Score=55.46 Aligned_cols=62 Identities=19% Similarity=0.166 Sum_probs=45.6
Q ss_pred CcEEEEEcCcccc--ccCCCceeEEEeccchhhhc-----------------chhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 250 SQIEVYHKLLEDV--ELPVESVDIIISEWMGYFLL-----------------FETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 250 ~~i~~i~~d~~~~--~~~~~~fD~Iis~~~~~~l~-----------------~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
.+++++++|..+. .++.++||+|++++++.... ....+..++.++.++|||||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 4678999999874 25568999999999875221 0112456788999999999999987664
Q ss_pred c
Q psy8709 311 L 311 (319)
Q Consensus 311 ~ 311 (319)
.
T Consensus 100 ~ 100 (297)
T 2zig_A 100 V 100 (297)
T ss_dssp E
T ss_pred C
Confidence 3
No 375
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.00 E-value=0.015 Score=46.80 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=31.9
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCC
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSG 181 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~ 181 (319)
...++.+|||+|||+|.++..+++. | ..+++++|+++
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc
Confidence 3567889999999999999998865 6 48999999986
No 376
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.00 E-value=0.0032 Score=58.31 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=53.0
Q ss_pred cceeeccCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccccc---CCCceeEEEecc
Q psy8709 203 KHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVEL---PVESVDIIISEW 276 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~~g--~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~---~~~~fD~Iis~~ 276 (319)
.+|+|+.||.|.++..+.+.| +..|.++|+++ .++..+.+. ....++.+|+.++.. +...+|+|+.++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~------~~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF------PHTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC------TTSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc------cccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 589999999999999999988 55899999999 555554443 234577899987642 212699999988
Q ss_pred chhh
Q psy8709 277 MGYF 280 (319)
Q Consensus 277 ~~~~ 280 (319)
+...
T Consensus 77 PCq~ 80 (343)
T 1g55_A 77 PCQP 80 (343)
T ss_dssp C---
T ss_pred CCcc
Confidence 7543
No 377
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.99 E-value=0.012 Score=50.88 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 140 ILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 140 i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
+.......++.+|||+|||+|.++...+..+...++++|+++.
T Consensus 85 ~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~ 127 (254)
T 1xtp_A 85 FIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKH 127 (254)
T ss_dssp HHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHH
T ss_pred HHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHH
Confidence 3344455678999999999999999988777778999998743
No 378
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.97 E-value=0.0078 Score=50.96 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=29.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.++.+|||+|||+|.++...+..+. +++++|+++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~ 85 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRT 85 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHH
Confidence 4668999999999999999987754 7999999743
No 379
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.97 E-value=0.0045 Score=53.90 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=31.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.+|.+|||+|||+|..+...++.+..+++++|+++.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~ 94 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDG 94 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHH
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHH
Confidence 578999999999999999998888788999999853
No 380
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.95 E-value=0.012 Score=49.63 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=34.2
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
......++.+|||+|||+|.++...++. ..+++++|+++..
T Consensus 71 ~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~ 111 (210)
T 3lbf_A 71 ELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGL 111 (210)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHH
T ss_pred HhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHH
Confidence 3345678999999999999999999877 6799999998543
No 381
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.95 E-value=0.01 Score=50.94 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=32.9
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
....++++|||+|||+|.++..+++.+..+++++|+++
T Consensus 39 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~ 76 (243)
T 3bkw_A 39 LPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE 76 (243)
T ss_dssp SCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH
T ss_pred ccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH
Confidence 44568899999999999999999888777999999874
No 382
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.95 E-value=0.0055 Score=52.99 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=32.4
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
.++.+|||+|||+|.++...+..+..+++++|+++..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~ 95 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGV 95 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHH
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHH
Confidence 4788999999999999999988887799999998543
No 383
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.94 E-value=0.0065 Score=50.73 Aligned_cols=41 Identities=22% Similarity=0.365 Sum_probs=33.2
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc--CCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~--ga~~V~avd~d~~~~~~ 186 (319)
..++.+|||+|||+|.++..+++. +..+++++|+++.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 62 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIAN 62 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHH
Confidence 457889999999999999998855 35699999998654443
No 384
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.94 E-value=0.012 Score=50.49 Aligned_cols=40 Identities=23% Similarity=0.444 Sum_probs=33.8
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
......++.+|||+|||+|.++...+..+ .+++++|+++.
T Consensus 64 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~ 103 (231)
T 1vbf_A 64 DELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEK 103 (231)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHH
T ss_pred HhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHH
Confidence 33456788999999999999999999877 79999999754
No 385
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=95.93 E-value=0.007 Score=51.44 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=32.1
Q ss_pred CCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~ 184 (319)
.++++|||+|||+|.++..++..+ ..+++++|+++...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~ 66 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVL 66 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 467899999999999999998766 47999999985443
No 386
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.93 E-value=0.013 Score=48.12 Aligned_cols=42 Identities=17% Similarity=0.327 Sum_probs=34.4
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
....++.+|||+|||+|.++..+++. ...++++|+++.....
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~ 89 (194)
T 1dus_A 48 VVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKL 89 (194)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHH
T ss_pred cccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHH
Confidence 34558899999999999999999877 7799999998654433
No 387
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.92 E-value=0.012 Score=52.13 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc-C--CceEEeeecCCCccc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA-G--AAKVFAIEKSGTPIR 185 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~-g--a~~V~avd~d~~~~~ 185 (319)
+.++.+|||+|||+|.+++.+++. + ..+++|+|+++....
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~ 110 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIE 110 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHH
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHH
Confidence 568999999999999999988854 2 458999999865433
No 388
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.89 E-value=0.015 Score=51.66 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=36.7
Q ss_pred HHHHHhcCCCCCCCeEEEecCCCChhhHHHH-hcCCceEEeeecCCCcc
Q psy8709 137 KSAILNNNSLFNNKHVIDVGAGTGILSIFAA-QAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 137 ~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa-~~ga~~V~avd~d~~~~ 184 (319)
...+.....+.++.+|||+|||+|.++..++ ..|. +++++|+++...
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~ 100 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQA 100 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHH
Confidence 3445555667789999999999999999888 5555 999999875433
No 389
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.88 E-value=0.015 Score=49.88 Aligned_cols=38 Identities=32% Similarity=0.440 Sum_probs=32.2
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCC
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGT 182 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~ 182 (319)
...++.+|||+|||+|.++...+... ..+++++|+++.
T Consensus 41 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~ 79 (234)
T 3dtn_A 41 VDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEK 79 (234)
T ss_dssp CSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHH
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHH
Confidence 35678999999999999999988664 789999999753
No 390
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.87 E-value=0.0072 Score=52.31 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=31.5
Q ss_pred CCCCeEEEecCCCChhhHHHHh-cCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQ-AGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~-~ga~~V~avd~d~~~~ 184 (319)
.++.+|||+|||+|.++..+++ .....|+|+|+++...
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~m 61 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENL 61 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGG
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHH
Confidence 4788999999999999998885 4577899999985443
No 391
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.87 E-value=0.0067 Score=52.41 Aligned_cols=37 Identities=32% Similarity=0.372 Sum_probs=32.1
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++.+|||+|||+|.+++.+++.+ .+|+++|+++...
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~ 113 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKI 113 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHH
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHH
Confidence 378999999999999999999887 8999999985433
No 392
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.86 E-value=0.011 Score=52.03 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=32.7
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.+++... ++..+++.|++......
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ 141 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDV 141 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHH
Confidence 568899999999999999887 99999999998654443
No 393
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.86 E-value=0.0088 Score=51.75 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=32.3
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
...++.+|||+|||+|.++...++.+. +++++|+++.
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~ 89 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKS 89 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHH
Confidence 356889999999999999999998877 8999999753
No 394
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=95.85 E-value=0.0083 Score=51.39 Aligned_cols=41 Identities=22% Similarity=0.303 Sum_probs=34.7
Q ss_pred CCCCCeEEEecCC-CChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAG-TGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~G-sG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++.+|||+||| +|.+++.+++....+++++|+++.....
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~ 94 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEY 94 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHH
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence 4588999999999 9999999987757899999998655444
No 395
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.83 E-value=0.0072 Score=52.69 Aligned_cols=39 Identities=15% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
...++++|||+|||+|.+++..+..+...++++|+++..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~ 91 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQN 91 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHH
Confidence 456889999999999999999888887899999997543
No 396
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.82 E-value=0.0077 Score=52.53 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=33.5
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCccc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIR 185 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~ 185 (319)
..++.+|||+|||+|.+++.++..+ ...++|+|++.....
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~ 87 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTN 87 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHH
Confidence 4577899999999999999999877 458999999865443
No 397
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.81 E-value=0.013 Score=52.70 Aligned_cols=44 Identities=27% Similarity=0.408 Sum_probs=35.1
Q ss_pred HHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 140 ILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 140 i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
+.......++.+|||+|||+|.++...+..+ .+++++|+++...
T Consensus 20 i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~ 63 (285)
T 1zq9_A 20 IIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLV 63 (285)
T ss_dssp HHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHH
T ss_pred HHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHH
Confidence 3334456788999999999999999998775 4899999985443
No 398
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.80 E-value=0.014 Score=53.71 Aligned_cols=72 Identities=17% Similarity=0.108 Sum_probs=53.8
Q ss_pred CcceeeccCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccccC-CCceeEEEeccchh
Q psy8709 202 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVELP-VESVDIIISEWMGY 279 (319)
Q Consensus 202 ~~~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~-~~~fD~Iis~~~~~ 279 (319)
+.+++|+.||.|.++..+.+.|+..+.++|+++ .++..+.+... .. .+|+.++... ...+|+|+..+++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~-----~~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE-----KP---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC-----CC---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC-----CC---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 368999999999999999999998899999999 65555555421 11 6888776421 23699999987765
Q ss_pred hh
Q psy8709 280 FL 281 (319)
Q Consensus 280 ~l 281 (319)
.+
T Consensus 83 ~f 84 (327)
T 2c7p_A 83 AF 84 (327)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 399
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.80 E-value=0.01 Score=55.59 Aligned_cols=48 Identities=17% Similarity=0.341 Sum_probs=38.3
Q ss_pred HHHhcCCCCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccH
Q psy8709 139 AILNNNSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 139 ~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~ 186 (319)
.+.......++.+|||+|||+|.+++.+++.+ ..+|+++|++......
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~ 261 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 261 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHH
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHH
Confidence 34445555677899999999999999999776 7899999998655444
No 400
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.79 E-value=0.011 Score=52.15 Aligned_cols=51 Identities=16% Similarity=0.328 Sum_probs=40.1
Q ss_pred HHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCccc
Q psy8709 135 SYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIR 185 (319)
Q Consensus 135 ~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~ 185 (319)
.+...+.....+.++.+|||+|||+|.++..+++.+ ..+++++|+++....
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~ 75 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLE 75 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHH
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHH
Confidence 344555566667789999999999999999988765 689999999865443
No 401
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.73 E-value=0.0079 Score=56.74 Aligned_cols=38 Identities=26% Similarity=0.333 Sum_probs=33.6
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++++|||+|||+|.+++.++..|+. |+++|+++.....
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~ 251 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGV 251 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHH
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHH
Confidence 5999999999999999999998888 9999998765444
No 402
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=95.72 E-value=0.011 Score=53.66 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|......+..+...|+|+|++......
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~ 86 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIAR 86 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHH
Confidence 578999999999976554455566789999999776655
No 403
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.71 E-value=0.017 Score=50.72 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=33.8
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhc-CC-ceEEeeecCCC
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSGT 182 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~-ga-~~V~avd~d~~ 182 (319)
...+.++++|||+|||+|.++..++.. |+ .+++++|+++.
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~ 79 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASP 79 (275)
T ss_dssp HHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCT
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCcc
Confidence 345678999999999999999998865 54 79999999875
No 404
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.70 E-value=0.014 Score=51.32 Aligned_cols=39 Identities=38% Similarity=0.428 Sum_probs=32.5
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
......++.+|||+|||+|.++...+..+ .+++++|+++
T Consensus 28 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~ 66 (261)
T 3ege_A 28 NLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSI 66 (261)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCH
T ss_pred HHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCH
Confidence 33345688999999999999999998854 6899999975
No 405
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.68 E-value=0.02 Score=54.14 Aligned_cols=63 Identities=19% Similarity=0.184 Sum_probs=49.8
Q ss_pred ccCCCcceeeccCCCchHHHHHH-Hc-C-CCEEEEEecHH-HHHHHHHHHHh--cCCC-CcEEEEEcCcc
Q psy8709 198 SLFNNKHVIDVGAGTGILSIFAA-QA-G-AAKVFAIEKSD-IAYETIDIIRK--NKYD-SQIEVYHKLLE 260 (319)
Q Consensus 198 ~~~~~~~VLDiGcGtG~ls~~la-~~-g-~~~V~gvD~s~-~i~~a~~~~~~--~g~~-~~i~~i~~d~~ 260 (319)
...++..++|+||+.|..+..++ +. + .++|+++|+++ ..+..++++.. |+.. ++++++..-+.
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 35677899999999999999887 43 3 36999999999 99999999887 4333 67887765443
No 406
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.65 E-value=0.015 Score=50.64 Aligned_cols=44 Identities=25% Similarity=0.399 Sum_probs=35.2
Q ss_pred HHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 139 AILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 139 ~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.+.......++.+|||+|||+|.++..++.....+++++|+++.
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~ 89 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSN 89 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHH
Confidence 34445567789999999999999999988654578999999753
No 407
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.65 E-value=0.015 Score=49.18 Aligned_cols=43 Identities=21% Similarity=0.248 Sum_probs=34.4
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhcCC--ceEEeeecCCCccc
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQAGA--AKVFAIEKSGTPIR 185 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~ga--~~V~avd~d~~~~~ 185 (319)
.....++.+|||+|||+|.++..+++.+. .+++++|.++....
T Consensus 72 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~ 116 (215)
T 2yxe_A 72 LLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAE 116 (215)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHH
T ss_pred hhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 34567889999999999999999886653 79999998764433
No 408
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=95.65 E-value=0.012 Score=52.46 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=32.2
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
..+.++++|||+|||+|.++..+++. .+|+|+|+++.
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m 106 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTL 106 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECC
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchh
Confidence 44568899999999999999998877 78999999874
No 409
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.65 E-value=0.011 Score=52.29 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=29.3
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCce--EEeeecCCC
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAK--VFAIEKSGT 182 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~--V~avd~d~~ 182 (319)
....++.+|||+|||+|.++. +++ + .+ |+++|+++.
T Consensus 17 ~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~ 54 (252)
T 1qyr_A 17 INPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRD 54 (252)
T ss_dssp HCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHH
T ss_pred cCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHH
Confidence 345688899999999999999 665 3 45 999999854
No 410
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.62 E-value=0.013 Score=51.23 Aligned_cols=40 Identities=20% Similarity=0.289 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHh-cC-CceEEeeecCCCc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQ-AG-AAKVFAIEKSGTP 183 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~-~g-a~~V~avd~d~~~ 183 (319)
..+.++.+|||+|||+|..+..++. .+ ...|+|+|+++..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~ 113 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRV 113 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHH
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHH
Confidence 4578999999999999999988874 45 7799999997653
No 411
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.61 E-value=0.0041 Score=52.34 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=31.7
Q ss_pred CCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCccc
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~ 185 (319)
++.+|||+|||+|.+++..+.. +..+++++|+++....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~ 103 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVR 103 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 6789999999999999998864 5789999999864433
No 412
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.59 E-value=0.0095 Score=51.23 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=30.1
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.++.+|||+|||+|.++...+..+. +++++|+++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~ 86 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEV 86 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHH
Confidence 3788999999999999999988754 8999998743
No 413
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.58 E-value=0.014 Score=54.09 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=63.0
Q ss_pred HhcccccCCCcceeeccCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-----cc
Q psy8709 193 ILNNKSLFNNKHVIDVGAGT-GILSIFAAQ-AGAAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-----EL 264 (319)
Q Consensus 193 i~~~l~~~~~~~VLDiGcGt-G~ls~~la~-~g~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-----~~ 264 (319)
+.......++.+||-+|+|. |.++..+++ .|+.+|+++|.++ .++.++ ..|. + .++..+-.++ ..
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa-~--~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK----QLGA-T--HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----HHTC-S--EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCC-C--EEecCCccCHHHHHHHh
Confidence 33556778889999999875 777777777 4776899999988 555543 3343 2 2232221111 11
Q ss_pred CCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEe
Q psy8709 265 PVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCP 306 (319)
Q Consensus 265 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 306 (319)
..+.+|+|+-.... ...+....+.|+|+|+++.
T Consensus 255 ~~gg~D~vid~~g~---------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 255 TDGGVNFALESTGS---------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TTSCEEEEEECSCC---------HHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEECCCC---------HHHHHHHHHHHhcCCEEEE
Confidence 22379999854321 2345677789999999884
No 414
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.57 E-value=0.013 Score=50.43 Aligned_cols=40 Identities=23% Similarity=0.300 Sum_probs=33.0
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCC
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGT 182 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~ 182 (319)
...+.++.+|||+|||+|.++..+++. | ..+++++|+++.
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~ 113 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 113 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHH
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHH
Confidence 345668899999999999999998855 4 579999998754
No 415
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.56 E-value=0.019 Score=48.36 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=31.2
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
...++.+|||+|||+|.++..++..+ .+++++|+++.
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~ 79 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAE 79 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHH
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHH
Confidence 35677899999999999999988775 48999999753
No 416
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.52 E-value=0.017 Score=47.81 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++.+|||+|||+|.++...+..+ .+++++|+++....
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~ 68 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIA 68 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHH
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHH
Confidence 34578899999999999999988775 48999999865433
No 417
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.52 E-value=0.012 Score=50.47 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=30.8
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
..++.+|||+|||+|.++...+..+. .++++|+++.
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~ 75 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEE 75 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHH
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHH
Confidence 35788999999999999999988775 7999998754
No 418
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.52 E-value=0.014 Score=52.80 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=34.3
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
....++.+|||+|||+|.++..++.. +.+|+++|+++.....
T Consensus 38 ~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~ 79 (299)
T 2h1r_A 38 AKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISE 79 (299)
T ss_dssp HCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHH
T ss_pred cCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHH
Confidence 34568899999999999999999876 4689999998654433
No 419
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.52 E-value=0.01 Score=54.75 Aligned_cols=29 Identities=62% Similarity=1.016 Sum_probs=27.2
Q ss_pred EEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 153 IDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 153 LD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
||+|||+|.+++.+++.|+.+|+++|+++
T Consensus 69 LDiGcGtG~ls~~la~~g~~~v~gvD~s~ 97 (340)
T 2fyt_A 69 LDVGCGTGILSMFAAKAGAKKVLGVDQSE 97 (340)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEEESST
T ss_pred EEeeccCcHHHHHHHHcCCCEEEEEChHH
Confidence 79999999999999998988999999985
No 420
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=95.50 E-value=0.01 Score=54.41 Aligned_cols=30 Identities=57% Similarity=0.926 Sum_probs=28.3
Q ss_pred EEEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 152 VIDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 152 vLD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
|||+|||+|.+++.+++.|+.+|+++|.++
T Consensus 42 VLDiGcGtG~ls~~la~~g~~~v~~vD~s~ 71 (328)
T 1g6q_1 42 VLDVGCGTGILSMFAAKHGAKHVIGVDMSS 71 (328)
T ss_dssp EEEETCTTSHHHHHHHHTCCSEEEEEESST
T ss_pred EEEecCccHHHHHHHHHCCCCEEEEEChHH
Confidence 899999999999999998989999999983
No 421
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.49 E-value=0.025 Score=51.02 Aligned_cols=47 Identities=19% Similarity=0.196 Sum_probs=36.7
Q ss_pred HHHHHhcCCCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcc
Q psy8709 137 KSAILNNNSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPI 184 (319)
Q Consensus 137 ~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~ 184 (319)
...+.......++.+|||+|||+|.++..+++. |. +++++|+++...
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~ 126 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQH 126 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHH
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 344555566778999999999999999988865 54 899999975443
No 422
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.47 E-value=0.013 Score=49.93 Aligned_cols=39 Identities=28% Similarity=0.262 Sum_probs=32.1
Q ss_pred CCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++..++. ....++|+|++......
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~ 77 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVT 77 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHH
Confidence 5679999999999999998865 47899999998655443
No 423
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.46 E-value=0.011 Score=52.61 Aligned_cols=41 Identities=34% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~~ 186 (319)
+.++++|||+|||+|.+++.+++. ++.+|+++|+++.....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~ 158 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHY 158 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHH
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 568899999999999999999976 57899999998655443
No 424
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.46 E-value=0.014 Score=49.52 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=32.4
Q ss_pred CCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++.+++.. ...++|+|+++.....
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~ 80 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSY 80 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHH
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHH
Confidence 57899999999999999988654 6799999998655443
No 425
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.46 E-value=0.012 Score=54.13 Aligned_cols=39 Identities=31% Similarity=0.301 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++++|||+|||+|.+++.+++.|+ +|+++|+++.....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~ 190 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGW 190 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHH
Confidence 3678999999999999999999888 99999998655443
No 426
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=95.46 E-value=0.014 Score=50.15 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=31.4
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++.+|||+|||+|.++..+++.+ .+++++|+++...
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~ 83 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELL 83 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHH
Confidence 478899999999999999999875 5899999975433
No 427
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.45 E-value=0.016 Score=51.18 Aligned_cols=40 Identities=25% Similarity=0.207 Sum_probs=33.5
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPI 184 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~ 184 (319)
...++.+|||+|||+|.+++.+++.. ...++++|+++...
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~ 73 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMA 73 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHH
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 45578899999999999999998665 68999999986443
No 428
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.44 E-value=0.018 Score=51.11 Aligned_cols=103 Identities=9% Similarity=0.077 Sum_probs=70.5
Q ss_pred cceeeccCCCchHHHHHHHc--------CCCEEEEEecHH-HH------------------------HHHHHHHH-----
Q psy8709 203 KHVIDVGAGTGILSIFAAQA--------GAAKVFAIEKSD-IA------------------------YETIDIIR----- 244 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~~--------g~~~V~gvD~s~-~i------------------------~~a~~~~~----- 244 (319)
..|+|+|+-.|..+..++.. ...+|+++|.-+ +- +...+.++
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 68999999999888776542 247999999222 11 11122211
Q ss_pred -hcCC-CCcEEEEEcCccccc------cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEEeecCc
Q psy8709 245 -KNKY-DSQIEVYHKLLEDVE------LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNRFT 310 (319)
Q Consensus 245 -~~g~-~~~i~~i~~d~~~~~------~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~t 310 (319)
..+. .++++++.|++.+.- .+.++||+++.+.-.| ......+..+...|+|||+++++...
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y-----~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLY-----EPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCH-----HHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCccc-----chHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 2343 478999999997642 2445799999876321 33456788889999999999999864
No 429
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.44 E-value=0.015 Score=51.57 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=34.0
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
+.++.+|||+|||+|.++...++.+...++++|+++....
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~ 101 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSIN 101 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHH
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 4578899999999999999888888789999999865443
No 430
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.44 E-value=0.012 Score=55.43 Aligned_cols=40 Identities=23% Similarity=0.344 Sum_probs=34.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++++|||+|||+|.+++.++..|+.+|+++|+++.....
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~ 258 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDI 258 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 4789999999999999999999888999999998654443
No 431
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=95.43 E-value=0.029 Score=52.76 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 135 SYKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 135 ~~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
.+...+.......++.+|||+|||+|.+....+..|. .++++|.+.
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~ 139 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSS 139 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCH
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCH
Confidence 3444455555566889999999999999999888765 899999974
No 432
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=95.42 E-value=0.01 Score=59.34 Aligned_cols=66 Identities=26% Similarity=0.342 Sum_probs=50.4
Q ss_pred hhhhhhchhHHHHHHHHHHHh--------cCCCCCCCeEEEecCCCChhhHHHHhcCCc-----eEEeeecCCCcccHH
Q psy8709 122 IHAEMIKDTVRTESYKSAILN--------NNSLFNNKHVIDVGAGTGILSIFAAQAGAA-----KVFAIEKSGTPIRTE 187 (319)
Q Consensus 122 ~~~~m~~d~~r~~~~~~~i~~--------n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~-----~V~avd~d~~~~~~~ 187 (319)
.++..-+|.+|+..|.++|.. +...+.++.|+|+|||+|.|..++.+.+++ +|||+|.++....+.
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~ 401 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL 401 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH
T ss_pred hhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH
Confidence 456667899999999999974 445667789999999999996555554433 789999987555443
No 433
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.42 E-value=0.02 Score=48.90 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=32.3
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCC
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGT 182 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~ 182 (319)
..+.++.+|||+|||+|.++..+++. | ..+++++|+++.
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~ 109 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPR 109 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHH
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHH
Confidence 34668899999999999999998854 5 479999998753
No 434
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.41 E-value=0.019 Score=48.17 Aligned_cols=38 Identities=29% Similarity=0.359 Sum_probs=30.9
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
..++ +|||+|||+|.++...++....+++++|+++...
T Consensus 42 ~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~ 79 (219)
T 3dlc_A 42 ITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMN 79 (219)
T ss_dssp CCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHH
T ss_pred CCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHH
Confidence 3344 9999999999999999877667999999875433
No 435
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.41 E-value=0.024 Score=49.25 Aligned_cols=47 Identities=21% Similarity=0.434 Sum_probs=37.8
Q ss_pred HHhcCCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCCcccH
Q psy8709 140 ILNNNSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 140 i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~~~~~ 186 (319)
+.......++.+|||+|||+|.++..++.. + ..+++++|+++.....
T Consensus 85 i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~ 133 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKL 133 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHH
Confidence 344456778999999999999999999866 6 7899999998654443
No 436
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=95.40 E-value=0.021 Score=49.00 Aligned_cols=38 Identities=24% Similarity=0.387 Sum_probs=31.2
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++++|||+|||+|.++..+++. ..++++|+++.....
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~ 69 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEI 69 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHH
Confidence 35789999999999999988876 799999998654433
No 437
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.40 E-value=0.011 Score=55.12 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=35.3
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCC-ceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGA-AKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga-~~V~avd~d~~~~~~ 186 (319)
+.++.+|||+|||+|.+++.++..+. ..++|+|+++.....
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~ 256 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIG 256 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHH
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHH
Confidence 56889999999999999999998875 489999998765554
No 438
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.40 E-value=0.016 Score=48.81 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=31.1
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
+.++.+|||+|||+|.++...++.+. .++++|+++..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~ 77 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPEL 77 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHH
Confidence 44788999999999999999987754 89999997543
No 439
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.40 E-value=0.011 Score=55.30 Aligned_cols=28 Identities=61% Similarity=1.051 Sum_probs=26.9
Q ss_pred EEecCCCChhhHHHHhcCCceEEeeecC
Q psy8709 153 IDVGAGTGILSIFAAQAGAAKVFAIEKS 180 (319)
Q Consensus 153 LD~G~GsG~l~i~aa~~ga~~V~avd~d 180 (319)
||+|||+|.+++.+++.|+.+|+++|.+
T Consensus 68 LDlGcGtG~ls~~la~~g~~~V~gvD~s 95 (376)
T 3r0q_C 68 LDVGTGSGILAIWSAQAGARKVYAVEAT 95 (376)
T ss_dssp EEESCTTTHHHHHHHHTTCSEEEEEESS
T ss_pred EEeccCcCHHHHHHHhcCCCEEEEEccH
Confidence 7999999999999999999999999998
No 440
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=95.40 E-value=0.0075 Score=53.81 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=30.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++.+|||+|||+|.+.+.++..+...|+++|+++...
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l 107 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNR 107 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHH
Confidence 47889999999999977767666667999999975443
No 441
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=95.39 E-value=0.011 Score=54.59 Aligned_cols=29 Identities=66% Similarity=0.971 Sum_probs=27.3
Q ss_pred EEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 153 IDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 153 LD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
||+|||+|.+++.+++.|+.+|+|+|+++
T Consensus 71 LDvGcG~G~~~~~la~~g~~~v~gvD~s~ 99 (349)
T 3q7e_A 71 LDVGSGTGILCMFAAKAGARKVIGIECSS 99 (349)
T ss_dssp EEESCTTSHHHHHHHHTTCSEEEEEECST
T ss_pred EEEeccchHHHHHHHHCCCCEEEEECcHH
Confidence 89999999999999998999999999984
No 442
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.37 E-value=0.0039 Score=71.51 Aligned_cols=101 Identities=11% Similarity=0.016 Sum_probs=50.0
Q ss_pred CCcceeeccCCCchHHHHHHHc-C-----CCEEEEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCcccc-ccCCCceeEE
Q psy8709 201 NNKHVIDVGAGTGILSIFAAQA-G-----AAKVFAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDV-ELPVESVDII 272 (319)
Q Consensus 201 ~~~~VLDiGcGtG~ls~~la~~-g-----~~~V~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~-~~~~~~fD~I 272 (319)
+..+||++|.|+|..+..+.+. + ..+++..|+|+ ..+.+++.++.. .+..-..|..+. .+....||+|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeEE
Confidence 4579999999999876655442 1 34789999998 777777665442 222211122221 1234679999
Q ss_pred EeccchhhhcchhhHHHHHHHHhcccCCCcEEEeec
Q psy8709 273 ISEWMGYFLLFETMIDSVIDARNRFLKPDGVVCPNR 308 (319)
Q Consensus 273 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 308 (319)
|+....|. ..++...+.+++++|||||++++..
T Consensus 1316 ia~~vl~~---t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1316 VCNCALAT---LGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEECC-----------------------CCEEEEEE
T ss_pred EEcccccc---cccHHHHHHHHHHhcCCCcEEEEEe
Confidence 97665443 3567788999999999999988754
No 443
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.36 E-value=0.01 Score=48.24 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=31.3
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
..++.+|||+|||+|.++...++.+. +++++|+++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~ 50 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVI 50 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHH
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHH
Confidence 45788999999999999999998775 9999998754
No 444
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.36 E-value=0.018 Score=50.21 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=33.0
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
...++.+|||+|||+|.++...+..++ +++++|+++....
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~ 73 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILK 73 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHH
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHH
Confidence 345889999999999999999987765 9999999764443
No 445
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.34 E-value=0.014 Score=50.29 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=32.7
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
...++.+|||+|||+|.++..+++.++.+++++|+++..
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~ 126 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPEL 126 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHH
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHH
Confidence 567889999999999999999886654889999987543
No 446
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.33 E-value=0.018 Score=50.14 Aligned_cols=39 Identities=13% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCCeEEEecCCCChhhHHHHhc----C-CceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQA----G-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~----g-a~~V~avd~d~~~~~~ 186 (319)
++++|||+|||+|..+...++. + ..+|+++|+++.....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~ 124 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQI 124 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHH
Confidence 5689999999999999998865 3 6899999999865443
No 447
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.33 E-value=0.015 Score=50.61 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhc---CCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA---GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~---ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.+++.++.. +..+++|+|+++.....
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~ 92 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLEL 92 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHH
Confidence 46789999999999999998865 46789999998765544
No 448
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=95.33 E-value=0.016 Score=50.03 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=33.9
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
....++.+|||+|||+|.++...+..+. .++++|+++....
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~ 57 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVE 57 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHH
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHH
Confidence 3567899999999999999999987764 8999999764443
No 449
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=95.32 E-value=0.013 Score=54.16 Aligned_cols=29 Identities=66% Similarity=1.038 Sum_probs=27.3
Q ss_pred EEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 153 IDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 153 LD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
||+|||+|.+++.+++.|+.+|+++|.++
T Consensus 55 LDiGcGtG~ls~~la~~g~~~V~~vD~s~ 83 (348)
T 2y1w_A 55 LDVGCGSGILSFFAAQAGARKIYAVEAST 83 (348)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEEECST
T ss_pred EEcCCCccHHHHHHHhCCCCEEEEECCHH
Confidence 79999999999999998989999999985
No 450
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.31 E-value=0.018 Score=52.66 Aligned_cols=42 Identities=24% Similarity=0.465 Sum_probs=35.5
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhc-CC-ceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQA-GA-AKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~-ga-~~V~avd~d~~~~~~ 186 (319)
.+.++.+|||+|||+|.+++.+++. |+ .+++++|+++.....
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~ 145 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDL 145 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 5678999999999999999999875 65 899999998755444
No 451
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=95.29 E-value=0.03 Score=48.26 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
++.+|||+|||+|.++...+..+...++++|+++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~ 114 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDF 114 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHH
Confidence 688999999999999999887777799999987543
No 452
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.27 E-value=0.016 Score=51.47 Aligned_cols=38 Identities=24% Similarity=0.411 Sum_probs=32.3
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.++.+|||+|||+|.++..++..|. .++++|+++....
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~ 156 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIA 156 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHH
Confidence 3788999999999999999998866 8999999865443
No 453
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.23 E-value=0.026 Score=50.86 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=35.7
Q ss_pred HHhcCC-CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 140 ILNNNS-LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 140 i~~n~~-~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
+..... +.++.+|||+|||+|.++..+++....+++++|+++....
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~ 154 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQAD 154 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHH
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 444444 7789999999999999999988663467999999765443
No 454
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=95.23 E-value=0.017 Score=49.68 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++..++.. ...++|+|++......
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~ 73 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA 73 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHH
Confidence 57799999999999999988654 6789999998654433
No 455
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.23 E-value=0.014 Score=53.88 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=39.6
Q ss_pred HHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcC--CceEEeeecCCCcccH
Q psy8709 137 KSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 137 ~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~g--a~~V~avd~d~~~~~~ 186 (319)
..++.....+.++.++||+|||+|.+.++++..+ ...++|+|+++.....
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~ 243 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGL 243 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHH
Confidence 3344445567789999999999999999999754 5899999998765554
No 456
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.22 E-value=0.036 Score=48.49 Aligned_cols=36 Identities=33% Similarity=0.552 Sum_probs=30.7
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
++.+|||+|||+|.++...+..+ ..++++|+++...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l 89 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEML 89 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHH
Confidence 78899999999999999988775 4799999875443
No 457
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=95.18 E-value=0.022 Score=49.10 Aligned_cols=36 Identities=17% Similarity=0.411 Sum_probs=30.4
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
+.++++|||+|||+|.++..++..+. +++++|+++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~ 74 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINED 74 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHH
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHH
Confidence 45779999999999999998887765 6899998753
No 458
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.18 E-value=0.016 Score=51.30 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.+.+|||+|||+|.++...+..+ .+|+|+|.+..
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ 72 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEA 72 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHH
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHH
Confidence 45789999999999999998877 57999998753
No 459
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=95.18 E-value=0.02 Score=48.66 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=30.3
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
.++.+|||+|||+|.++..++..+. +++++|+++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~ 63 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSE 63 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHH
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHH
Confidence 4788999999999999999988754 8999999754
No 460
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.17 E-value=0.032 Score=52.39 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=32.7
Q ss_pred CCCCeEEEecCCCChhhHHHHhc--CCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~--ga~~V~avd~d~~~~~ 185 (319)
.++.+|||+|||+|.+.+.+++. ....++|+|+++....
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~ 78 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD 78 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH
Confidence 45679999999999999999854 4689999999986654
No 461
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.12 E-value=0.014 Score=52.28 Aligned_cols=39 Identities=31% Similarity=0.486 Sum_probs=32.6
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++.+++.+..+++++|+++.....
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~ 161 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEI 161 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHH
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 567999999999999999886677899999998655444
No 462
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.11 E-value=0.015 Score=49.20 Aligned_cols=42 Identities=26% Similarity=0.417 Sum_probs=34.1
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcC--CceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~g--a~~V~avd~d~~~~~~ 186 (319)
...++.+|||+|||+|.++..+++.+ ..+++++|.++.....
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 77 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNY 77 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHH
Confidence 45678899999999999999988664 5699999997654433
No 463
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.11 E-value=0.015 Score=52.66 Aligned_cols=150 Identities=16% Similarity=0.074 Sum_probs=79.9
Q ss_pred HHHhhhcccccccCCCCCCCcchhhHhhhhhHhHhhHHHHhhhhhhhhcccccCCccccchHHHHHHHHHHHHHHHHHHH
Q psy8709 8 QCVASRLDSMDMHADSDDNDASVKDCYQRNWYKQAVTSVIVRSVILVLSVTIMSPPACSDLEEKNAEIDMRNEDIAQMRH 87 (319)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 87 (319)
|-++++|.+|+-+.++.+ |..-|+|+=. -+ +| ...-...+...+..-..+.++.+...+.++-.
T Consensus 11 ~~~~~~l~~~~~~~~~~~----~~~~~~~~~~--l~--~~--------~~~~~v~~~~~~~vl~~~~~~~l~~~~~~~y~ 74 (298)
T 3fpf_A 11 KRIASRLEGMNYHFDEMD----TSGVMPLLDE--IE--EI--------AHDSTIDFESAKHILDDAEMNHALSLIRKFYV 74 (298)
T ss_dssp HHHHHHHGGGTTCGGGCC----TTTTHHHHHH--HH--HH--------HTCTTSCHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcccc----HHHHHHHHHH--HH--Hh--------cccCCcCHHHHHHHhcChhHHHHHHHHHHHHH
Confidence 457889999988877755 4444443211 00 00 00000111112222223344555666666666
Q ss_pred HHHHHhhhccccccccccCCCcchhhhhhccchhhhhhhhchhHHHHHHHHHHHhcCCCCCCCeEEEecCCCChhh-HHH
Q psy8709 88 LMQDMLNKKEEDEEGENKTRRHDKYYFNSYEDAHIHAEMIKDTVRTESYKSAILNNNSLFNNKHVIDVGAGTGILS-IFA 166 (319)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~yf~~y~~~~~~~~m~~d~~r~~~~~~~i~~n~~~~~~~~vLD~G~GsG~l~-i~a 166 (319)
....++...|...-... +..-..+..+..|..+..+.+.+. . -..+.++++|||+|||+|.++ +.+
T Consensus 75 ~~~~~~E~~wa~~l~~~---~~p~~~l~~fpy~~~~~~l~~~E~-----~-----la~l~~g~rVLDIGcG~G~~ta~~l 141 (298)
T 3fpf_A 75 NLGMKLEMEKAQEVIES---DSPWETLRSFYFYPRYLELLKNEA-----A-----LGRFRRGERAVFIGGGPLPLTGILL 141 (298)
T ss_dssp HHHHHHHHHHHHHHHHC---SSHHHHHHTSTTHHHHHHHHHHHH-----H-----HTTCCTTCEEEEECCCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CChHHhhccCCCcccHHHHHHHHH-----H-----HcCCCCcCEEEEECCCccHHHHHHH
Confidence 66666655554422211 111223343444433333333221 1 146789999999999998765 556
Q ss_pred HhcCCceEEeeecCCCcccH
Q psy8709 167 AQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 167 a~~ga~~V~avd~d~~~~~~ 186 (319)
++....+|+++|+++.....
T Consensus 142 A~~~ga~V~gIDis~~~l~~ 161 (298)
T 3fpf_A 142 SHVYGMRVNVVEIEPDIAEL 161 (298)
T ss_dssp HHTTCCEEEEEESSHHHHHH
T ss_pred HHccCCEEEEEECCHHHHHH
Confidence 76656789999998765554
No 464
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.09 E-value=0.045 Score=49.71 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=61.0
Q ss_pred cceeeccCCCchHHHHHH----H-cCCC--EEEEEecHH---------HHHH-HHHHHHhc----CCCCcEEEEEcCccc
Q psy8709 203 KHVIDVGAGTGILSIFAA----Q-AGAA--KVFAIEKSD---------IAYE-TIDIIRKN----KYDSQIEVYHKLLED 261 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la----~-~g~~--~V~gvD~s~---------~i~~-a~~~~~~~----g~~~~i~~i~~d~~~ 261 (319)
-+|||+|-|||....... + .+.. +++.+|..+ .... ........ +-.-..++..+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 589999999998654332 2 2222 567777422 0111 11122211 111245678889866
Q ss_pred cc--cCCCceeEEEeccchhhhcchhhHHHHHHHHhcccCCCcEEE
Q psy8709 262 VE--LPVESVDIIISEWMGYFLLFETMIDSVIDARNRFLKPDGVVC 305 (319)
Q Consensus 262 ~~--~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 305 (319)
.- ++..+||+|+.++...--.++---..+++.++++++|||.+.
T Consensus 178 ~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 42 344579999987643322222223678999999999999987
No 465
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=95.08 E-value=0.051 Score=47.11 Aligned_cols=39 Identities=15% Similarity=0.298 Sum_probs=32.3
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
....++.+|||+|||+|.++...+..+ .+++++|+++..
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~ 73 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAM 73 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHH
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHH
Confidence 345678999999999999999988775 689999987543
No 466
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.07 E-value=0.025 Score=48.74 Aligned_cols=43 Identities=26% Similarity=0.410 Sum_probs=35.6
Q ss_pred cCCCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 143 NNSLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 143 n~~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.....++.+|||+|||+|.+++.+++. +.+++++|+++.....
T Consensus 86 ~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~ 128 (248)
T 2yvl_A 86 KLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKT 128 (248)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHH
T ss_pred hcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHH
Confidence 345678999999999999999999877 7899999998654443
No 467
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.06 E-value=0.017 Score=54.26 Aligned_cols=39 Identities=44% Similarity=0.475 Sum_probs=34.4
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
++++|||+|||+|.+++.++..|+.+|+++|+++.....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~ 255 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIET 255 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 789999999999999999998888999999998654443
No 468
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.06 E-value=0.018 Score=49.43 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=31.4
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.++.+|||+|||+|.++...++.+ .+++++|+++....
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~ 73 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLS 73 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHH
Confidence 378899999999999999988776 47999998754433
No 469
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.02 E-value=0.07 Score=48.48 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=54.0
Q ss_pred ceeeccCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHhcCCCCcEEEEEcCccccccC-CCceeEEEeccchhhh
Q psy8709 204 HVIDVGAGTGILSIFAAQAGAAKVFAIEKSDIAYETIDIIRKNKYDSQIEVYHKLLEDVELP-VESVDIIISEWMGYFL 281 (319)
Q Consensus 204 ~VLDiGcGtG~ls~~la~~g~~~V~gvD~s~~i~~a~~~~~~~g~~~~i~~i~~d~~~~~~~-~~~fD~Iis~~~~~~l 281 (319)
+|+|+-||.|.++.-+.+.|..-+.++|+++ .|.+..+.|. .-.++.+|+.++... ...+|+++..++...+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~---~a~~ty~~N~---~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDK---SIWKTYESNH---SAKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCT---TTHHHHHHHC---CSEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCH---HHHHHHHHHC---CCCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 6899999999999999999998899999999 3333333332 135788999887432 2479999988876543
No 470
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=95.01 E-value=0.016 Score=51.58 Aligned_cols=39 Identities=10% Similarity=0.013 Sum_probs=32.8
Q ss_pred CCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCccc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~ 185 (319)
.+..+|||+|||+|.+++..+.. +...++++|++.....
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le 170 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVG 170 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHH
Confidence 45779999999999999998866 6999999999854433
No 471
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.99 E-value=0.029 Score=50.93 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=34.4
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhcC--CceEEeeecCCCcc
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQAG--AAKVFAIEKSGTPI 184 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~g--a~~V~avd~d~~~~ 184 (319)
......++.+|||+|||+|.++..+++.+ ..+|+++|+++...
T Consensus 69 ~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~ 113 (317)
T 1dl5_A 69 EWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC 113 (317)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH
T ss_pred HhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 33456789999999999999999988665 36799999985444
No 472
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.99 E-value=0.023 Score=53.33 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=29.2
Q ss_pred HHHHHHhcCCCCCCCeEEEecCCCChhhHHHHhcCC
Q psy8709 136 YKSAILNNNSLFNNKHVIDVGAGTGILSIFAAQAGA 171 (319)
Q Consensus 136 ~~~~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~ga 171 (319)
+..++.....+.++.++||++||||.+.++++..++
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~ 218 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGI 218 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHh
Confidence 445555666778899999999999999999997653
No 473
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.96 E-value=0.021 Score=49.66 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=32.1
Q ss_pred CCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.+++..++. ....++|+|++......
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~ 85 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDY 85 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHH
Confidence 35678999999999999998865 46789999998655443
No 474
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.94 E-value=0.031 Score=48.47 Aligned_cols=45 Identities=27% Similarity=0.363 Sum_probs=36.4
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCCcccH
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~~~~~ 186 (319)
....+.++.+|||+|||+|.++..+++. + ..+++++|.++.....
T Consensus 90 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~ 136 (258)
T 2pwy_A 90 TLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQ 136 (258)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHH
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 3445778999999999999999998866 6 6899999997654443
No 475
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=94.94 E-value=0.042 Score=48.60 Aligned_cols=40 Identities=18% Similarity=0.406 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCCChhhHHHH-hcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAA-QAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa-~~ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.+++.++ ..+..+++++|+++.....
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~ 148 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSL 148 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHH
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHH
Confidence 467899999999999999988 4567899999998654443
No 476
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=94.93 E-value=0.029 Score=49.64 Aligned_cols=46 Identities=30% Similarity=0.425 Sum_probs=36.9
Q ss_pred HhcCCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCCcccH
Q psy8709 141 LNNNSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 141 ~~n~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~~~~~ 186 (319)
.....+.++.+|||+|||+|.+++.+++. + ..+++++|+++.....
T Consensus 105 ~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~ 152 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKL 152 (277)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHH
T ss_pred HHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHH
Confidence 33456778999999999999999999866 6 6899999997654443
No 477
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.91 E-value=0.028 Score=47.97 Aligned_cols=41 Identities=27% Similarity=0.401 Sum_probs=33.3
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCC------ceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGA------AKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga------~~V~avd~d~~~~~ 185 (319)
.+.++.+|||+|||+|.++..+++... .+++++|+++....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~ 123 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVN 123 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHH
Confidence 456889999999999999999886643 69999999764443
No 478
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.89 E-value=0.046 Score=48.51 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEecCCCChhhHHHHhc-C-CceEEeeecCCCccc
Q psy8709 144 NSLFNNKHVIDVGAGTGILSIFAAQA-G-AAKVFAIEKSGTPIR 185 (319)
Q Consensus 144 ~~~~~~~~vLD~G~GsG~l~i~aa~~-g-a~~V~avd~d~~~~~ 185 (319)
....++.+|||+|||+|.++...+.. + +.+++++|+++....
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~ 61 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLA 61 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHH
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 35668899999999999999998855 4 579999999865443
No 479
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.024 Score=50.66 Aligned_cols=40 Identities=30% Similarity=0.398 Sum_probs=33.2
Q ss_pred CCCCeEEEecCCCChhhHHHHh--cCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQ--AGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~--~ga~~V~avd~d~~~~~~ 186 (319)
.++.+|||+|||+|.++...++ .+..+++++|+++.....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~ 76 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKT 76 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHH
Confidence 3789999999999999999885 368899999998654443
No 480
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=94.84 E-value=0.015 Score=50.66 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=31.4
Q ss_pred CCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcccH
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~~~ 186 (319)
++.+|||+|||+|.+++.++.. ...+++++|+++.....
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~ 104 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNY 104 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 5789999999999999887754 46899999998654443
No 481
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.84 E-value=0.031 Score=51.28 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=52.4
Q ss_pred cceeeccCCCchHHHHHHHcCC--CEE-EEEecHH-HHHHHHHHHHhcCCCCcEEEEEcCccccc---cCCCceeEEEec
Q psy8709 203 KHVIDVGAGTGILSIFAAQAGA--AKV-FAIEKSD-IAYETIDIIRKNKYDSQIEVYHKLLEDVE---LPVESVDIIISE 275 (319)
Q Consensus 203 ~~VLDiGcGtG~ls~~la~~g~--~~V-~gvD~s~-~i~~a~~~~~~~g~~~~i~~i~~d~~~~~---~~~~~fD~Iis~ 275 (319)
.+++|+.||.|.++.-+.+.|. ..| .++|+++ ..+.-+.|.. .. ++.+|+.++. ++...+|+++..
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~-----~~--~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK-----EE--VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC-----CC--CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC-----CC--cccCChhhcCHHHhccCCCCEEEec
Confidence 5899999999999999999884 577 8999999 5444444331 12 5678888774 222369999988
Q ss_pred cchhhh
Q psy8709 276 WMGYFL 281 (319)
Q Consensus 276 ~~~~~l 281 (319)
++...+
T Consensus 84 pPCQ~f 89 (327)
T 3qv2_A 84 PPCQPY 89 (327)
T ss_dssp CCCTTC
T ss_pred CCccCc
Confidence 775544
No 482
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=94.81 E-value=0.024 Score=47.48 Aligned_cols=41 Identities=24% Similarity=0.309 Sum_probs=29.7
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++.+|||+|||+|.++.........+++++|.++.....
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~ 61 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKK 61 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHH
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 34688999999999998554433334589999998654443
No 483
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=94.79 E-value=0.028 Score=53.56 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=34.7
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
...++.+|||+|||+|.+++.++.. +.+|+|+|+++.....
T Consensus 283 ~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~ 323 (433)
T 1uwv_A 283 DVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEK 323 (433)
T ss_dssp TCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHH
T ss_pred cCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHH
Confidence 4567889999999999999999977 6799999998765554
No 484
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.79 E-value=0.02 Score=52.65 Aligned_cols=38 Identities=34% Similarity=0.424 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
.++++|||+|||+|.+++. ++ ++.+|+++|+++.....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~ 231 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIEL 231 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHH
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHH
Confidence 4789999999999999999 88 89999999998654443
No 485
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.77 E-value=0.021 Score=52.30 Aligned_cols=64 Identities=19% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCcEEEEEcCcccc--ccCCCceeEEEeccchhhh-----------cchhhHHHHHHHHhcccCCCcEEEeecCcce
Q psy8709 249 DSQIEVYHKLLEDV--ELPVESVDIIISEWMGYFL-----------LFETMIDSVIDARNRFLKPDGVVCPNRFTLS 312 (319)
Q Consensus 249 ~~~i~~i~~d~~~~--~~~~~~fD~Iis~~~~~~l-----------~~~~~~~~~l~~~~r~LkpgG~li~~~~t~~ 312 (319)
.....++++|..+. .++.++||+|++++++... .....+...+.++.++|+|||.+++.....+
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~ 88 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAY 88 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEe
No 486
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=94.76 E-value=0.02 Score=50.70 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=31.1
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCC
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSG 181 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~ 181 (319)
...++.+|||+|||+|.+++.++..| .+|+++|+++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~ 115 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHP 115 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECCh
Confidence 34567899999999999999999876 5899999986
No 487
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.75 E-value=0.022 Score=47.52 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=28.9
Q ss_pred CCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 149 NKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 149 ~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
+.+|||+|||+|.++...+..|. +++++|+++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~ 74 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATR 74 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHH
Confidence 78999999999999999887755 8999998754
No 488
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=94.75 E-value=0.045 Score=46.72 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=30.5
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
.++.+|||+|||+|.++...++.+. +++++|+++..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~ 74 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDM 74 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHH
Confidence 4778999999999999999887765 89999987543
No 489
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=94.69 E-value=0.028 Score=52.72 Aligned_cols=40 Identities=30% Similarity=0.500 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcccH
Q psy8709 146 LFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 146 ~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~~ 186 (319)
..++.+|||+|||+|.+++.+++.++ +|+++|++......
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~ 270 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLS 270 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHH
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHH
Confidence 45788999999999999999998864 99999998654443
No 490
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.68 E-value=0.033 Score=49.22 Aligned_cols=38 Identities=29% Similarity=0.428 Sum_probs=31.6
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
...++.+|||+|||+|.++..++. ....++++|+++..
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~ 91 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATM 91 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHH
T ss_pred CCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHH
Confidence 346788999999999999999888 45689999987543
No 491
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=94.62 E-value=0.032 Score=47.17 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
++.+|||+|||+|.++...+..+ .+++++|+++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~ 78 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSRE 78 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHH
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHH
Confidence 78899999999999999988775 58999998754
No 492
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.59 E-value=0.079 Score=44.38 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCc
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTP 183 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~ 183 (319)
++.+|||+|||+|.++... +..+++++|+++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~ 68 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAM 68 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHH
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHH
Confidence 8899999999999988776 55589999987543
No 493
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=94.56 E-value=0.035 Score=48.11 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=33.9
Q ss_pred hcCCCCCCCeEEEecCCCChhhHHHHhc-CCceEEeeecCCCcc
Q psy8709 142 NNNSLFNNKHVIDVGAGTGILSIFAAQA-GAAKVFAIEKSGTPI 184 (319)
Q Consensus 142 ~n~~~~~~~~vLD~G~GsG~l~i~aa~~-ga~~V~avd~d~~~~ 184 (319)
......++.+|||+|||+|.++..++.. ....++++|+++...
T Consensus 27 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~ 70 (259)
T 2p35_A 27 AQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDML 70 (259)
T ss_dssp TTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHH
T ss_pred HhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHH
Confidence 3345568899999999999999988855 467899999875443
No 494
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=94.55 E-value=0.039 Score=49.09 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=32.9
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCccc
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPIR 185 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~~ 185 (319)
.+.++.+|||+|||+|.++..+++....+++++|+++....
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~ 119 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNK 119 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 56788999999999999999888652348999999765433
No 495
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=94.51 E-value=0.038 Score=48.91 Aligned_cols=47 Identities=21% Similarity=0.415 Sum_probs=34.8
Q ss_pred HHHhcCCCCCCCeEEEecCCCChhhHHHHhc--CCceEEeeecCCCccc
Q psy8709 139 AILNNNSLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSGTPIR 185 (319)
Q Consensus 139 ~i~~n~~~~~~~~vLD~G~GsG~l~i~aa~~--ga~~V~avd~d~~~~~ 185 (319)
.+.......++.+|||+|||+|.++..+++. ...+++++|+++....
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~ 149 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLK 149 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHH
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHH
Confidence 3444456778999999999999999998865 3689999999764443
No 496
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=94.50 E-value=0.031 Score=48.80 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCChhhHHHHhcCCceEEeeecCCC
Q psy8709 148 NNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGT 182 (319)
Q Consensus 148 ~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~ 182 (319)
++.+|||+|||+|.++...++.+. .++++|+++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~ 83 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSAD 83 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHH
Confidence 568999999999999999988764 7999998753
No 497
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=94.48 E-value=0.034 Score=46.34 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=29.8
Q ss_pred CCCCeEEEecCCCChhhHHHHhcCCceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAGAAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~ga~~V~avd~d~~~~ 184 (319)
.++ +|||+|||+|.++..+++.+. +++++|+++...
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~ 64 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGL 64 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHH
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHH
Confidence 355 999999999999999887764 899999875443
No 498
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=94.47 E-value=0.06 Score=47.40 Aligned_cols=46 Identities=24% Similarity=0.510 Sum_probs=36.8
Q ss_pred HhcCCCCCCCeEEEecCCCChhhHHHHh-cC-CceEEeeecCCCcccH
Q psy8709 141 LNNNSLFNNKHVIDVGAGTGILSIFAAQ-AG-AAKVFAIEKSGTPIRT 186 (319)
Q Consensus 141 ~~n~~~~~~~~vLD~G~GsG~l~i~aa~-~g-a~~V~avd~d~~~~~~ 186 (319)
.....+.++.+|||+|||+|.++..++. .+ ..+++++|+++.....
T Consensus 92 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~ 139 (280)
T 1i9g_A 92 VHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEH 139 (280)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHH
T ss_pred HHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 3345577899999999999999999886 45 6899999998655443
No 499
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=94.47 E-value=0.037 Score=47.69 Aligned_cols=38 Identities=29% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCCCeEEEecCCCChhhHHHHhcC-CceEEeeecCCCcc
Q psy8709 147 FNNKHVIDVGAGTGILSIFAAQAG-AAKVFAIEKSGTPI 184 (319)
Q Consensus 147 ~~~~~vLD~G~GsG~l~i~aa~~g-a~~V~avd~d~~~~ 184 (319)
.++++|||+|||+|..++..+... ..+++++|+++...
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~ 108 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMI 108 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHH
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHH
Confidence 367899999999999999998754 78999999986443
No 500
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.45 E-value=0.027 Score=51.27 Aligned_cols=42 Identities=24% Similarity=0.289 Sum_probs=34.4
Q ss_pred CCCCCCeEEEecCCCChhhHHHHhc--CCceEEeeecCCCcccH
Q psy8709 145 SLFNNKHVIDVGAGTGILSIFAAQA--GAAKVFAIEKSGTPIRT 186 (319)
Q Consensus 145 ~~~~~~~vLD~G~GsG~l~i~aa~~--ga~~V~avd~d~~~~~~ 186 (319)
...++.+|||+|||+|..++.++.. +...|+++|++..+...
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~ 142 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLAS 142 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 3568999999999999999998853 46899999998765443
Done!