Query psy8713
Match_columns 309
No_of_seqs 174 out of 1922
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 17:22:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pbh_A Procathepsin B; thiol p 100.0 6.8E-57 2.3E-61 423.6 18.3 240 21-309 11-317 (317)
2 3hhi_A Cathepsin B-like cystei 100.0 5.7E-55 1.9E-59 411.6 13.8 233 37-309 24-315 (325)
3 3qj3_A Cathepsin L-like protei 100.0 2.8E-51 9.7E-56 387.2 17.3 240 17-305 45-330 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 2.2E-51 7.4E-56 387.5 16.0 240 17-305 50-328 (329)
5 1by8_A Protein (procathepsin K 100.0 1.6E-50 5.4E-55 379.8 16.9 239 17-305 34-313 (314)
6 2o6x_A Procathepsin L1, secret 100.0 1.6E-50 5.4E-55 379.1 15.0 239 17-306 27-306 (310)
7 2c0y_A Procathepsin S; proenzy 100.0 3.4E-50 1.2E-54 377.7 13.4 237 17-305 35-314 (315)
8 1cs8_A Human procathepsin L; p 100.0 6.8E-50 2.3E-54 375.8 14.5 238 17-305 34-315 (316)
9 3tnx_A Papain; hydrolase, cyto 100.0 2.3E-49 7.8E-54 377.3 17.8 232 17-305 89-361 (363)
10 3qsd_A Cathepsin B-like peptid 100.0 5.2E-49 1.8E-53 359.2 16.3 186 83-307 2-254 (254)
11 3cbj_A Cathepsin B; cathepsin 100.0 7E-49 2.4E-53 360.7 16.1 190 81-309 4-260 (266)
12 3pdf_A Cathepsin C, dipeptidyl 100.0 5.6E-49 1.9E-53 383.4 15.7 245 17-308 143-437 (441)
13 1pci_A Procaricain; zymogen, h 100.0 2.1E-48 7.3E-53 366.4 16.7 233 17-305 45-320 (322)
14 1xkg_A DER P I, major mite fec 100.0 1.4E-47 4.7E-52 359.3 11.6 225 17-308 31-304 (312)
15 1m6d_A Cathepsin F, catsf; pap 100.0 2.3E-45 7.9E-50 327.1 12.6 179 84-307 1-214 (214)
16 3i06_A Cruzipain; autocatalyti 100.0 9.6E-45 3.3E-49 323.3 12.0 173 84-306 1-214 (215)
17 3kwz_A Cathepsin K; enzyme inh 100.0 1.6E-44 5.6E-49 321.5 13.2 171 84-305 1-214 (215)
18 8pch_A Cathepsin H; hydrolase, 100.0 9.1E-45 3.1E-49 324.2 10.7 175 84-307 1-219 (220)
19 2xu3_A Cathepsin L1; hydrolase 100.0 5.3E-44 1.8E-48 319.5 13.5 175 84-305 1-219 (220)
20 3p5u_A Actinidin; SAD, cystein 100.0 1.9E-43 6.5E-48 315.9 12.6 175 84-309 1-220 (220)
21 3f5v_A DER P 1 allergen; aller 100.0 1.1E-43 3.8E-48 317.7 10.5 172 81-305 7-221 (222)
22 3ovx_A Cathepsin S; hydrolase, 100.0 1.4E-43 4.9E-48 316.1 11.0 173 84-305 2-217 (218)
23 2b1m_A SPE31; papain-like, sug 100.0 5.6E-43 1.9E-47 318.0 13.7 176 83-306 1-224 (246)
24 1ppo_A Protease omega; hydrola 100.0 7.1E-43 2.4E-47 311.5 13.1 169 84-305 1-214 (216)
25 3u8e_A Papain-like cysteine pr 100.0 5.3E-43 1.8E-47 313.5 12.0 174 84-306 1-219 (222)
26 1cqd_A Protein (protease II); 100.0 9.7E-43 3.3E-47 311.6 13.2 174 83-306 2-217 (221)
27 1deu_A Procathepsin X; cystein 100.0 5.5E-43 1.9E-47 323.2 11.8 188 81-308 33-277 (277)
28 1yal_A Chymopapain; hydrolase, 100.0 1.1E-42 3.9E-47 310.5 13.1 170 84-306 1-215 (218)
29 1iwd_A Ervatamin B; cysteine p 100.0 1E-42 3.4E-47 310.3 12.2 171 84-305 1-213 (215)
30 2oul_A Falcipain 2; cysteine p 100.0 2.8E-42 9.5E-47 312.5 12.1 176 81-306 15-240 (241)
31 3bwk_A Cysteine protease falci 100.0 3.9E-42 1.3E-46 311.9 11.9 176 81-306 17-242 (243)
32 3ioq_A CMS1MS2; caricaceae, cy 100.0 5E-42 1.7E-46 305.3 12.3 166 84-305 1-210 (213)
33 1s4v_A Cysteine endopeptidase; 100.0 4.3E-42 1.5E-46 309.0 11.8 176 83-306 1-219 (229)
34 2cio_A Papain; hydrolase/inhib 100.0 1.1E-41 3.9E-46 302.9 13.4 169 84-305 1-210 (212)
35 1o0e_A Ervatamin C; plant cyst 100.0 1.1E-41 3.6E-46 302.3 12.0 166 84-305 1-206 (208)
36 2bdz_A Mexicain; cysteine prot 100.0 1.9E-41 6.6E-46 301.9 13.5 166 84-306 1-211 (214)
37 3f75_A Toxopain-2, cathepsin L 100.0 5.5E-42 1.9E-46 306.9 9.2 176 82-305 5-223 (224)
38 2fo5_A Cysteine proteinase EP- 100.0 8E-42 2.7E-46 313.0 10.5 179 82-306 2-224 (262)
39 2wbf_X Serine-repeat antigen p 100.0 1.7E-38 5.9E-43 291.1 13.3 100 173-309 157-261 (265)
40 3ois_A Cysteine protease; alph 100.0 9.6E-38 3.3E-42 290.1 5.3 202 42-291 17-272 (291)
41 2cb5_A Protein (bleomycin hydr 99.9 1.5E-25 5.3E-30 217.7 8.5 107 168-291 301-412 (453)
42 2e01_A Cysteine proteinase 1; 99.9 7.4E-25 2.5E-29 213.1 11.0 107 166-291 303-413 (457)
43 3pw3_A Aminopeptidase C; bleom 99.7 1.4E-17 4.8E-22 158.7 3.1 123 166-291 222-356 (383)
44 2l95_A Crammer, LP06209P; cyst 97.6 3.8E-05 1.3E-09 57.0 4.1 46 17-62 32-77 (80)
45 3f75_P Toxopain-2, cathepsin L 97.1 0.0003 1E-08 55.1 3.3 44 17-64 48-92 (106)
46 3pw3_A Aminopeptidase C; bleom 96.8 0.00013 4.4E-09 69.4 -1.6 14 100-113 22-35 (383)
47 3pbh_A Procathepsin B; thiol p 93.5 0.032 1.1E-06 51.6 2.6 31 8-38 129-159 (317)
48 3qsd_A Cathepsin B-like peptid 91.3 0.077 2.6E-06 47.2 2.0 30 9-38 68-97 (254)
49 3cbj_A Cathepsin B; cathepsin 90.7 0.1 3.5E-06 46.8 2.3 30 9-38 73-102 (266)
50 3hhi_A Cathepsin B-like cystei 90.5 0.13 4.5E-06 47.6 2.9 32 8-40 135-166 (325)
51 2cio_A Papain; hydrolase/inhib 88.7 0.18 6.3E-06 43.5 2.2 36 4-40 51-89 (212)
52 1pci_A Procaricain; zymogen, h 87.7 0.19 6.7E-06 46.4 1.9 36 4-40 157-195 (322)
53 3f5v_A DER P 1 allergen; aller 87.7 0.18 6E-06 43.8 1.5 35 4-39 60-96 (222)
54 2bdz_A Mexicain; cysteine prot 87.7 0.22 7.7E-06 43.0 2.1 36 4-40 51-89 (214)
55 1ppo_A Protease omega; hydrola 87.2 0.26 8.7E-06 42.7 2.3 36 4-40 51-89 (216)
56 1o0e_A Ervatamin C; plant cyst 86.6 0.29 1E-05 42.1 2.3 36 4-40 51-90 (208)
57 1yal_A Chymopapain; hydrolase, 86.3 0.31 1.1E-05 42.2 2.3 36 4-40 51-89 (218)
58 1iwd_A Ervatamin B; cysteine p 86.2 0.31 1.1E-05 42.1 2.3 36 4-40 51-90 (215)
59 3ioq_A CMS1MS2; caricaceae, cy 86.2 0.24 8.1E-06 42.8 1.5 29 10-39 60-88 (213)
60 1m6d_A Cathepsin F, catsf; pap 86.1 0.32 1.1E-05 42.0 2.3 35 4-39 51-89 (214)
61 2b1m_A SPE31; papain-like, sug 85.7 0.33 1.1E-05 43.0 2.2 36 4-40 52-91 (246)
62 3kwz_A Cathepsin K; enzyme inh 85.3 0.36 1.2E-05 41.6 2.1 30 10-40 60-90 (215)
63 2oul_A Falcipain 2; cysteine p 85.2 0.36 1.2E-05 42.5 2.2 36 4-40 68-107 (241)
64 1cqd_A Protein (protease II); 85.2 0.38 1.3E-05 41.8 2.3 36 4-40 53-92 (221)
65 3u8e_A Papain-like cysteine pr 84.7 0.34 1.2E-05 42.1 1.7 36 4-40 51-90 (222)
66 8pch_A Cathepsin H; hydrolase, 84.3 0.34 1.1E-05 41.9 1.5 30 10-40 63-93 (220)
67 1xkg_A DER P I, major mite fec 84.2 0.32 1.1E-05 44.7 1.5 36 4-40 140-177 (312)
68 1s4v_A Cysteine endopeptidase; 84.2 0.42 1.5E-05 41.7 2.2 30 10-40 62-92 (229)
69 2xu3_A Cathepsin L1; hydrolase 84.2 0.41 1.4E-05 41.4 2.1 30 10-40 62-92 (220)
70 3f75_A Toxopain-2, cathepsin L 84.1 0.35 1.2E-05 41.9 1.5 29 10-39 68-97 (224)
71 2o6x_A Procathepsin L1, secret 83.9 0.28 9.6E-06 45.0 0.9 30 10-40 153-182 (310)
72 3bwk_A Cysteine protease falci 83.6 0.39 1.3E-05 42.4 1.6 36 4-40 70-109 (243)
73 3p5u_A Actinidin; SAD, cystein 83.1 0.52 1.8E-05 40.8 2.2 30 10-40 62-92 (220)
74 3qj3_A Cathepsin L-like protei 82.8 0.41 1.4E-05 44.4 1.5 36 4-40 168-207 (331)
75 3qt4_A Cathepsin-L-like midgut 82.8 0.5 1.7E-05 43.8 2.1 29 11-40 177-205 (329)
76 2fo5_A Cysteine proteinase EP- 82.8 0.4 1.4E-05 42.9 1.4 32 9-41 63-95 (262)
77 1by8_A Protein (procathepsin K 82.5 0.47 1.6E-05 43.6 1.8 36 4-40 150-189 (314)
78 3i06_A Cruzipain; autocatalyti 82.0 0.44 1.5E-05 41.1 1.3 31 9-40 59-92 (215)
79 3pdf_A Cathepsin C, dipeptidyl 81.2 0.47 1.6E-05 45.7 1.4 36 4-40 262-301 (441)
80 2c0y_A Procathepsin S; proenzy 80.0 0.76 2.6E-05 42.2 2.3 31 9-40 160-191 (315)
81 1cs8_A Human procathepsin L; p 79.8 0.58 2E-05 43.0 1.4 30 10-40 158-188 (316)
82 1pxv_A Cysteine protease; hydr 79.7 3.3 0.00011 34.8 5.9 69 170-293 96-164 (183)
83 1deu_A Procathepsin X; cystein 79.7 0.36 1.2E-05 43.5 -0.1 35 4-39 95-131 (277)
84 3tnx_A Papain; hydrolase, cyto 78.8 0.86 2.9E-05 42.8 2.2 28 9-36 210-237 (363)
85 3ovx_A Cathepsin S; hydrolase, 77.1 0.83 2.8E-05 39.3 1.5 30 10-40 64-94 (218)
86 1x9y_A Cysteine proteinase; ha 76.5 5.4 0.00018 37.0 6.8 69 170-293 272-340 (367)
87 3erv_A Putative C39-like pepti 71.9 8.1 0.00028 33.9 6.6 26 167-192 125-151 (236)
88 3ois_A Cysteine protease; alph 71.0 1.4 4.7E-05 39.8 1.4 31 9-40 117-147 (291)
89 1cv8_A Staphopain; cysteine pr 70.6 11 0.00038 31.5 6.7 38 249-292 117-154 (174)
90 2wbf_X Serine-repeat antigen p 69.4 2.3 7.9E-05 37.6 2.5 36 4-40 60-102 (265)
91 2e01_A Cysteine proteinase 1; 69.1 1.7 5.7E-05 42.1 1.6 29 10-39 141-169 (457)
92 2cb5_A Protein (bleomycin hydr 68.5 1.6 5.5E-05 42.2 1.3 30 11-41 139-168 (453)
93 3m3g_A EPL1 protein; fungal, p 29.6 12 0.00041 29.4 0.1 19 95-113 44-64 (120)
94 3suj_A Cerato-platanin 1; doub 25.6 15 0.00053 29.0 0.1 17 98-114 47-65 (127)
95 3sum_A Cerato-platanin-like pr 24.4 18 0.00061 29.0 0.3 10 104-113 55-64 (136)
96 4d8b_A Streptopain; papain fol 21.6 1.8E+02 0.0062 25.6 6.4 53 250-309 193-255 (261)
97 3bb7_A Interpain A; cysteine p 21.5 1.9E+02 0.0066 26.1 6.7 35 249-290 264-298 (321)
No 1
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=6.8e-57 Score=423.57 Aligned_cols=240 Identities=48% Similarity=0.933 Sum_probs=185.9
Q ss_pred HHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCCCCCCC
Q psy8713 21 AWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSWMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWPNCPTI 100 (309)
Q Consensus 21 a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~~cg~v 100 (309)
.=++|.++|-. + .+|++|+| |+++++||++++||.++... . .+..... ....+||++||||++||+|+.|
T Consensus 11 ~~~~i~~~N~~---~-~~~~~~~n-f~~~~~e~~~~~lg~~~~~~--~--~~~~~~~-~~~~~lP~s~DwR~~~~~c~~v 80 (317)
T 3pbh_A 11 SDELVNYVNKR---N-TTWQAGHN-FYNVDMSYLKRLCGTFLGGP--K--PPQRVMF-TEDLKLPASFDAREQWPQCPTI 80 (317)
T ss_dssp CHHHHHHHHHH---T-CSEEECCC-CSSCCHHHHHHTCCBCTTCC--C--CSEEECC-CSCCCCCSSEEHHHHCTTCGGG
T ss_pred cHHHHHHHHCC---C-CCeEEeec-cccCCHHHHHHHcCCCCCcc--c--cCccccc-ccccCCCCCEechhccCCCCCc
Confidence 34677777732 3 48999999 77999999999999876541 1 1222211 1246899999999999999999
Q ss_pred ccccCccCCCCCc----------------------CCCccccCCC---------CCCC----------CC--------CC
Q psy8713 101 REIRDQGSCGSCW----------------------GCRPYEIAPC---------EHHV----------NG--------TR 131 (309)
Q Consensus 101 tpVkdQg~CGSCW----------------------~cs~~~~~~C---------~~~~----------~g--------~~ 131 (309)
+||||||.||||| ..|++++.+| .++. +| ..
T Consensus 81 tpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~ 160 (317)
T 3pbh_A 81 KEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESH 160 (317)
T ss_dssp TCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCC
T ss_pred CCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCC
Confidence 9999999999999 2334444444 3321 00 01
Q ss_pred CCCCCCC------------------CCCcccccccccCccccccccccceeeeeeecchHHHHHHHHHhcCCEEEEEecc
Q psy8713 132 PSCDASK------------------GHTPKCVRECQENYDVPYKKDLNFGAKSYSVSSNEKSIMKEIYEHGPVEGAFTVF 193 (309)
Q Consensus 132 ~~C~~~~------------------~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~ik~~l~~~GPv~v~~~~~ 193 (309)
..|.++. .+.+.|...|...+...+..+..+....|.++.++++||++|+++|||+|+|.++
T Consensus 161 ~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~ 240 (317)
T 3pbh_A 161 VGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVY 240 (317)
T ss_dssp CBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEec
Confidence 1222322 1233444556655655666666676666788889999999999999999999999
Q ss_pred cccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEE
Q psy8713 194 DDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIA 273 (309)
Q Consensus 194 ~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiik 273 (309)
++|++|++|||. ..|+...++|||+|||||++ ++++|||||
T Consensus 241 ~~f~~Y~~GVy~-------------------------------------~~~~~~~~~HaV~iVGyG~~--~g~~YWivk 281 (317)
T 3pbh_A 241 SDFLLYKSGVYQ-------------------------------------HVTGEMMGGHAIRILGWGVE--NGTPYWLVA 281 (317)
T ss_dssp GGGGGEEEEEEC-------------------------------------CCSCCEEEEEEEEEEEEEEE--TTEEEEEEE
T ss_pred ccccCCCCcEEc-------------------------------------cCCCCCCCCEEEEEEEEEEe--CCeeEEEEE
Confidence 999999999998 44666677999999999998 889999999
Q ss_pred cCCCCCCCCCceEEEEccCCccccCcceEEEeecCC
Q psy8713 274 NSWNTDWGDNGLFKILRGKDECGIESSITAGVPKLD 309 (309)
Q Consensus 274 NSWG~~WG~~Gy~~i~~g~n~cgi~~~~~~~~~~~~ 309 (309)
||||++|||+|||||+||.|+|||++.+++++|++|
T Consensus 282 NSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~p~~d 317 (317)
T 3pbh_A 282 NSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTD 317 (317)
T ss_dssp CSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCCC
T ss_pred cCCCCCcCCCcEEEEEcCCCcccCCCceEeeecCCC
Confidence 999999999999999999999999999999999998
No 2
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=5.7e-55 Score=411.59 Aligned_cols=233 Identities=37% Similarity=0.682 Sum_probs=143.3
Q ss_pred CCcccccc-cCCCCcHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCCCCCCCccccCccCCCCCc--
Q psy8713 37 GSKQAEKN-SLSNIPRAHLKSWMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW-- 113 (309)
Q Consensus 37 ~s~~~g~N-f~~~~~~e~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW-- 113 (309)
.+|++++| +|+|++.|||+++||.++.........+..........+||++||||++||+||+|+||||||.|||||
T Consensus 24 ~~~~~~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~w~~~g~vtpVkdQg~CGSCWAF 103 (325)
T 3hhi_A 24 GIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAV 103 (325)
T ss_dssp --------------------------------CCSCBCCCCHHHHHCCCCSCEEHHHHSTTCTTTTCCCBCCSSBCHHHH
T ss_pred CceEEecccccccCCHHHHHHHhCCCCCCcccccccCccccccccccCCCCcEehhHhcCCCCccccccCCCCccccHHH
Confidence 48999999 899999999999998765331000000111111111367999999999999999999999999999999
Q ss_pred -------------------CCCccccCCC--------CCCCCC-------CCCCCCCCCCCCc--ccc---------ccc
Q psy8713 114 -------------------GCRPYEIAPC--------EHHVNG-------TRPSCDASKGHTP--KCV---------REC 148 (309)
Q Consensus 114 -------------------~cs~~~~~~C--------~~~~~g-------~~~~C~~~~~~~~--~~~---------~~c 148 (309)
..|++++.+| .++... ..+.+.+..+|+. .|. ..|
T Consensus 104 sa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~c~~~~~~~~~~~~C 183 (325)
T 3hhi_A 104 AAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPC 183 (325)
T ss_dssp HHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHTCBCBTTTSCCSSCCCBSSSCCTTCCCBG
T ss_pred HHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCCcccccCCccccccccccccccCCCC
Confidence 2344444444 333100 1122222233442 111 223
Q ss_pred cc-Cc----------cccccccccceeeeeeecchHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhh
Q psy8713 149 QE-NY----------DVPYKKDLNFGAKSYSVSSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLI 217 (309)
Q Consensus 149 ~~-~~----------~~~~~~~~~~~~~~~~v~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~ 217 (309)
.. .+ ...+..+..+.+..|.+ .++++||++|+++|||+|+|.++++|+.|++|||.
T Consensus 184 ~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~v-~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~------------ 250 (325)
T 3hhi_A 184 SQFNFDTPKCDYTCDDPTIPVVNYRSWTSYAL-QGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYH------------ 250 (325)
T ss_dssp GGCCCCCCCCCSSCSSTTSCCCCBCEEEEEEE-CSHHHHHHHHHHHCCEEEEEEEEHHHHTCCSSEEC------------
T ss_pred CCcccCCcchhhcccccccccceEEeecceEe-CCHHHHHHHHHHCCCEEEEEEeccccccccCceec------------
Confidence 21 00 01122233444556666 78999999999999999999999899999999998
Q ss_pred hhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCCcccc
Q psy8713 218 KWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKDECGI 297 (309)
Q Consensus 218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n~cgi 297 (309)
..++...++|||+|||||++ ++++|||||||||++|||+|||||+||.|+|||
T Consensus 251 -------------------------~~~~~~~~~HaV~iVGyG~~--~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI 303 (325)
T 3hhi_A 251 -------------------------HVSGQYLGGHAVRLVGWGTS--NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGI 303 (325)
T ss_dssp -------------------------CCSCCEEEEEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGT
T ss_pred -------------------------CCCCCCCCCEEEEEEEEEec--CCceEEEEEeCCCCCcccCCEEEEEcCCCeecC
Confidence 34555567999999999988 899999999999999999999999999999999
Q ss_pred CcceEEEeecCC
Q psy8713 298 ESSITAGVPKLD 309 (309)
Q Consensus 298 ~~~~~~~~~~~~ 309 (309)
++.+++++|++|
T Consensus 304 ~~~~~~g~p~~~ 315 (325)
T 3hhi_A 304 EDGGSAGIPLAP 315 (325)
T ss_dssp TSCEEEEEEC--
T ss_pred ccceEEeecCCC
Confidence 999999999986
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2.8e-51 Score=387.25 Aligned_cols=240 Identities=22% Similarity=0.410 Sum_probs=176.4
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHHh-CCCCCCCCCCCCCCcccccC-----CCCCCCCCceec
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSWM-GVHPDYNLPANRLPELIGYS-----EVDEDLPANFDS 90 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~l-g~~~~~~~~~~~~~~~~~~~-----~~~~~lP~~~Dw 90 (309)
++..+.++|.+||...+.+-.+|++|+|+|+|++.|||++++ |.++... ........... ....+||++|||
T Consensus 45 iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lP~s~Dw 122 (331)
T 3qj3_A 45 IFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPAD--LHKNGIPIKTREDLGLNASVRYPASFDW 122 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSS--TTTTCEEECSGGGGTCCSSCCCCSSEEG
T ss_pred HHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccc--ccccCcccccccccccccccCCCcceec
Confidence 467788899999988766668999999999999999998865 4443221 10011111111 024579999999
Q ss_pred CCCCCCCCCCccccCccCCCCCc----------------------CCCccccCCCCCCCC---C-----------CC-CC
Q psy8713 91 RTKWPNCPTIREIRDQGSCGSCW----------------------GCRPYEIAPCEHHVN---G-----------TR-PS 133 (309)
Q Consensus 91 R~~~~~cg~vtpVkdQg~CGSCW----------------------~cs~~~~~~C~~~~~---g-----------~~-~~ 133 (309)
|++ |+|+||||||.||||| ..|++++.+|..... | .. +.
T Consensus 123 R~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~a~~yi~~~~Gi 198 (331)
T 3qj3_A 123 RDQ----GMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALGCSGGWMNDAFTYVAQNGGI 198 (331)
T ss_dssp GGG----TCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHHHTCE
T ss_pred ccC----CccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccCCCCCCCCCHHHHHHHHHHcCCc
Confidence 999 8999999999999999 345566666654211 0 01 22
Q ss_pred CCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcc
Q psy8713 134 CDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNET 211 (309)
Q Consensus 134 C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~ 211 (309)
+.+..+|+......|..... ...+.+..| .++. ++++||++|+++|||+|+|+++.+|+.|++|||..|
T Consensus 199 ~~e~~yPY~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~---- 269 (331)
T 3qj3_A 199 DSEGAYPYEMADGNCHYDPN-----QVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYYNP---- 269 (331)
T ss_dssp EBTTTSCCCSSCCCCCCCTT-----SEEECCSEEEEESSCCHHHHHHHHHHHCCEEEEECCCTTGGGEEEEEECCT----
T ss_pred CcccccCccCCCCCCCCCcc-----cceeEeeEEEEeCCCCHHHHHHHHHhCCCEEEEEEcccccccccCceEeCC----
Confidence 33334555554455642211 112223333 4554 899999999999999999999877999999999853
Q ss_pred hhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEcc
Q psy8713 212 TAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRG 291 (309)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g 291 (309)
.|+...++|||+|||||++ ++++|||||||||++|||+|||||+|+
T Consensus 270 --------------------------------~c~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~ 315 (331)
T 3qj3_A 270 --------------------------------TCETNKFTHAVLIVGYGNE--NGQDYWLVKNSWGDGWGLDGYFKIARN 315 (331)
T ss_dssp --------------------------------TCCSSCCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred --------------------------------CCCCCcCCEEEEEEEEecc--CCceEEEEEcCCCCCcCCCCEEEEEcC
Confidence 4666678999999999998 889999999999999999999999999
Q ss_pred C-CccccCcceEEEe
Q psy8713 292 K-DECGIESSITAGV 305 (309)
Q Consensus 292 ~-n~cgi~~~~~~~~ 305 (309)
. |.|||++.+++++
T Consensus 316 ~~n~CgI~~~~~~p~ 330 (331)
T 3qj3_A 316 ANNHCGIAGVASVPT 330 (331)
T ss_dssp SSSGGGTTTSCEEEE
T ss_pred CCCccCcCCceeeee
Confidence 8 9999999988764
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.2e-51 Score=387.51 Aligned_cols=240 Identities=20% Similarity=0.388 Sum_probs=177.0
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSWMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWPN 96 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~~ 96 (309)
++..+.++|.+||...+.+-.+|++|+|+|+|++.|||++++|.++... +...............+||++||||++
T Consensus 50 iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~g~~~~~~-~~~~~~~~~~~~~~~~~lP~~~DwR~~--- 125 (329)
T 3qt4_A 50 IFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLAYVNRGKAQK-PKHPENLRMPYVSSKKPLAASVDWRSN--- 125 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHHHHHHTCCC-------CCEEECCCCCSCCCSCEECTTT---
T ss_pred HHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHHhcCCccccc-ccccccccccccCCccCCCCCEEcccc---
Confidence 4677888999999987666689999999999999999988888664321 111100011111112589999999997
Q ss_pred CCCCccccCccCCCCCc--------------------CCCccccCCCCC---------CCCC-------CCCCCCCCCCC
Q psy8713 97 CPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH---------HVNG-------TRPSCDASKGH 140 (309)
Q Consensus 97 cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~---------~~~g-------~~~~C~~~~~~ 140 (309)
+||||||||.||||| ..|++++.+|.. +... ..+.+.+..+|
T Consensus 126 --~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~~~~a~~yi~~~Gi~~e~~yP 203 (329)
T 3qt4_A 126 --AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGWMDSAFSYIHDYGIMSESAYP 203 (329)
T ss_dssp --SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCCHHHHHHHHHHSCBCBTTTSC
T ss_pred --ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCCCCCCCCChhHHHHHHHHcCCCcHHHee
Confidence 499999999999999 445555555543 2100 11334444456
Q ss_pred CcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhh
Q psy8713 141 TPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIK 218 (309)
Q Consensus 141 ~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~ 218 (309)
+......|..... ...+.+..| .++. ++++||++|+++|||+|+|+++.+|+.|++|||..|
T Consensus 204 Y~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~GVy~~~----------- 267 (329)
T 3qt4_A 204 YEAQGDYCRFDSS-----QSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQ----------- 267 (329)
T ss_dssp CCSSCCCCCCCGG-----GCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCCGGGTTEEEEEECCS-----------
T ss_pred eecCCCCCCCCcc-----cceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecChhhhhccCceeecC-----------
Confidence 6555556643221 122233333 5554 789999999999999999999889999999999853
Q ss_pred hhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC-Ccccc
Q psy8713 219 WTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK-DECGI 297 (309)
Q Consensus 219 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~-n~cgi 297 (309)
.|+...++|||+|||||++ ++.+|||||||||++|||+|||||+|+. |.|||
T Consensus 268 -------------------------~c~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI 320 (329)
T 3qt4_A 268 -------------------------TCNQSDLNHGVLVVGYGSD--NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGI 320 (329)
T ss_dssp -------------------------SCCSSCCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGT
T ss_pred -------------------------CCCCCcCCEEEEEEEEEee--CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCC
Confidence 4665668999999999998 7899999999999999999999999998 99999
Q ss_pred CcceEEEe
Q psy8713 298 ESSITAGV 305 (309)
Q Consensus 298 ~~~~~~~~ 305 (309)
++.+++++
T Consensus 321 ~~~~~yp~ 328 (329)
T 3qt4_A 321 ATAASYPA 328 (329)
T ss_dssp TTTCEEEE
T ss_pred CCceeEee
Confidence 99988765
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.6e-50 Score=379.75 Aligned_cols=239 Identities=21% Similarity=0.369 Sum_probs=173.5
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHH-HhCCCCCCCCCCCCCCcccccCCCCCC-CCCceecCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKS-WMGVHPDYNLPANRLPELIGYSEVDED-LPANFDSRTKW 94 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~-lP~~~DwR~~~ 94 (309)
++....++|.+||...+.+-.+|++|+|+|+|++.|||++ ++|.++... ......... .....+ ||++||||++
T Consensus 34 iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~--~~~~~~~~~-~~~~~~~lP~~~DwR~~- 109 (314)
T 1by8_A 34 IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS--HSRSNDTLY-IPEWEGRAPDSVDYRKK- 109 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC--CCCSSSSSB-CCCCSSCCCSCCBSTTT-
T ss_pred HHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc--cccCCcccc-ccccccCCCCeEeCCCC-
Confidence 4677888999999865444468999999999999999865 555543321 100101111 111223 9999999999
Q ss_pred CCCCCCccccCccCCCCCc--------------------CCCccccCCCCC-------CCCC--------CCCCCCCCCC
Q psy8713 95 PNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH-------HVNG--------TRPSCDASKG 139 (309)
Q Consensus 95 ~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~-------~~~g--------~~~~C~~~~~ 139 (309)
|+|+||||||.||||| ..|++++.+|.. +... ..+.+.+..+
T Consensus 110 ---g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y 186 (314)
T 1by8_A 110 ---GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 186 (314)
T ss_dssp ---TCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTSCGGGCCCSHHHHHHHHHTTCBCBTTTS
T ss_pred ---CCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCcCCCHHHHHHHHHHcCCcCcHhhC
Confidence 8999999999999999 445566666643 2100 1233444445
Q ss_pred CCcccccccccCccccccccccceeee-eeecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCceEeCCCCcchhhhh
Q psy8713 140 HTPKCVRECQENYDVPYKKDLNFGAKS-YSVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRFFVPGNETTAMSL 216 (309)
Q Consensus 140 ~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy~~~~~~~~~~~~ 216 (309)
|+......|...... ..+.+.. +.++. ++++||++|+++|||+|+|+++ ++|+.|++|||..|
T Consensus 187 PY~~~~~~C~~~~~~-----~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~--------- 252 (314)
T 1by8_A 187 PYVGQEESCMYNPTG-----KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDE--------- 252 (314)
T ss_dssp CCCSSCCCCCCCGGG-----CCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCT---------
T ss_pred CCCCCCCCcCCCCcc-----ceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCC---------
Confidence 655444556422111 1122223 35654 8999999999999999999998 68999999999842
Q ss_pred hhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC-Ccc
Q psy8713 217 IKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK-DEC 295 (309)
Q Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~-n~c 295 (309)
.|+...++|||+|||||++ ++++|||||||||++|||+|||||+|+. |.|
T Consensus 253 ---------------------------~c~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~C 303 (314)
T 1by8_A 253 ---------------------------SCNSDNLNHAVLAVGYGIQ--KGNKHWIIKNSWGENWGNKGYILMARNKNNAC 303 (314)
T ss_dssp ---------------------------TCCSSCCCEEEEEEEEEEE--TTEEEEEEECSBTTTSTBTTEEEECCSSSCGG
T ss_pred ---------------------------CCCCCCCCeEEEEEEEecc--CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcC
Confidence 3666668999999999998 8899999999999999999999999995 999
Q ss_pred ccCcceEEEe
Q psy8713 296 GIESSITAGV 305 (309)
Q Consensus 296 gi~~~~~~~~ 305 (309)
||++.+++++
T Consensus 304 gI~~~~~~p~ 313 (314)
T 1by8_A 304 GIANLASFPK 313 (314)
T ss_dssp GTTSSCEEEC
T ss_pred CccCeeEEee
Confidence 9999988764
No 6
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.6e-50 Score=379.13 Aligned_cols=239 Identities=19% Similarity=0.339 Sum_probs=171.9
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHH-HhC-CCCCCCCCCCCCCcccccCCCCCCCCCceecCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKS-WMG-VHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKW 94 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~-~lg-~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~ 94 (309)
++....++|.+||.....+-.+|++|+|+|+|++.|||++ ++| ..... +......... ....+||++||||++
T Consensus 27 iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~--~~~~~~~~~~--~~~~~lP~~~DwR~~- 101 (310)
T 2o6x_A 27 IWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRAS--DILSHGVPYE--ANNRAVPDKIDWRES- 101 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGG--GGSCSSEECC--C----CCSCEEGGGG-
T ss_pred HHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcc--cccccCCccc--cccCCCCCeEecCcC-
Confidence 5677888999999865443468999999999999999885 555 33211 1100111111 112369999999999
Q ss_pred CCCCCCccccCccCCCCCc--------------------CCCccccCCCC---------CCCCC-------CCCCCCCCC
Q psy8713 95 PNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE---------HHVNG-------TRPSCDASK 138 (309)
Q Consensus 95 ~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~---------~~~~g-------~~~~C~~~~ 138 (309)
|+|+||||||.||||| ..|++++.+|. ++... ..+.+.+..
T Consensus 102 ---g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~ 178 (310)
T 2o6x_A 102 ---GYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESS 178 (310)
T ss_dssp ---TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCHHHHHHHHTTSCBCBTTT
T ss_pred ---CCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCHHHHHHHHHHCCcCchhc
Confidence 8999999999999999 34455555554 32100 122333444
Q ss_pred CCCcccccccccCccccccccccceeee-eeec-chHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhh
Q psy8713 139 GHTPKCVRECQENYDVPYKKDLNFGAKS-YSVS-SNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSL 216 (309)
Q Consensus 139 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~-~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~ 216 (309)
+|+......|..... ...+.+.. +.++ .++++||++|+++|||+|+|.++++|+.|++|||..
T Consensus 179 yPY~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y~~Gvy~~---------- 243 (310)
T 2o6x_A 179 YPYTAVEGQCRYNKQ-----LGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGIYQS---------- 243 (310)
T ss_dssp SCCCSSCCCCCCCGG-----GCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTEEEEEECC----------
T ss_pred CCCCCCCCCccCCCC-----CCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhCCCceecC----------
Confidence 555544445642211 11223333 3565 389999999999999999999988999999999984
Q ss_pred hhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC-Ccc
Q psy8713 217 IKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK-DEC 295 (309)
Q Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~-n~c 295 (309)
..|+...++|||+|||||++ ++++|||||||||++|||+|||||+|+. |.|
T Consensus 244 --------------------------~~c~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~C 295 (310)
T 2o6x_A 244 --------------------------QTCSPLRVNHAVLAVGYGTQ--GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMC 295 (310)
T ss_dssp --------------------------SSCCTTCCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECSSSSGG
T ss_pred --------------------------CCCCCCCCCEEEEEEEEecc--CCceEEEEEeCCCCccCCCcEEEEEcCCCCcC
Confidence 24665567999999999998 7899999999999999999999999998 899
Q ss_pred ccCcceEEEee
Q psy8713 296 GIESSITAGVP 306 (309)
Q Consensus 296 gi~~~~~~~~~ 306 (309)
||++.+++++.
T Consensus 296 gi~~~~~~p~~ 306 (310)
T 2o6x_A 296 GIASLASLPMV 306 (310)
T ss_dssp GTTTSEEEEEE
T ss_pred CccceeeEEEe
Confidence 99999887653
No 7
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=3.4e-50 Score=377.69 Aligned_cols=237 Identities=20% Similarity=0.367 Sum_probs=170.3
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHH-HhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKS-WMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWP 95 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~ 95 (309)
++....++|.+||...+.+-.+|++|+|+|+|++.|||++ ++|.++.. +... ..... .....+||++||||++
T Consensus 35 iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~--~~~~-~~~~~-~~~~~~lP~~~DwR~~-- 108 (315)
T 2c0y_A 35 IWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPS--QWQR-NITYK-SNPNRILPDSVDWREK-- 108 (315)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCC--GGGS-CBCC-------CCCSCEETTTT--
T ss_pred HHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCc--cccC-Ccccc-CcccCCCCCeEecCCC--
Confidence 4677888999999865444579999999999999988855 55654322 1100 01111 1123479999999999
Q ss_pred CCCCCccccCccCCCCCc--------------------CCCccccCCCC----------CCCCC--------CCCCCCCC
Q psy8713 96 NCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE----------HHVNG--------TRPSCDAS 137 (309)
Q Consensus 96 ~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~----------~~~~g--------~~~~C~~~ 137 (309)
|+|+||||||.||||| ..|++++.+|. ++... ..+.+.+.
T Consensus 109 --g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~ 186 (315)
T 2c0y_A 109 --GCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDA 186 (315)
T ss_dssp --TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTT
T ss_pred --CCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCCCCHHHHHHHHHHhCCcCchh
Confidence 8999999999999999 34555555554 22100 01223333
Q ss_pred CCCCcccccccccCccccccccccceeee-eeecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCceEeCCCCcchhh
Q psy8713 138 KGHTPKCVRECQENYDVPYKKDLNFGAKS-YSVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRFFVPGNETTAM 214 (309)
Q Consensus 138 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy~~~~~~~~~~ 214 (309)
.+|+......|...... ..+.+.. +.++. ++++||++|+++|||+|+|+++ ++|+.|++|||..|
T Consensus 187 ~yPY~~~~~~C~~~~~~-----~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~------- 254 (315)
T 2c0y_A 187 SYPYKAMDQKCQYDSKY-----RAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP------- 254 (315)
T ss_dssp TSCCCSSCCCCCCCGGG-----EEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCT-------
T ss_pred cCCCccCCCCcccCCcc-----cccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcccCC-------
Confidence 45554444456422110 1122223 35654 8899999999999999999998 68999999999842
Q ss_pred hhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC-C
Q psy8713 215 SLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK-D 293 (309)
Q Consensus 215 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~-n 293 (309)
.|+. .++|||+|||||++ ++++|||||||||++|||+|||||+|+. |
T Consensus 255 -----------------------------~c~~-~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~n 302 (315)
T 2c0y_A 255 -----------------------------SCTQ-NVNHGVLVVGYGDL--NGKEYWLVKNSWGHNFGEEGYIRMARNKGN 302 (315)
T ss_dssp -----------------------------TCCS-CCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECSSSS
T ss_pred -----------------------------CCCC-cCCEEEEEEEEeec--CCCcEEEEEcCCCCCcCCCcEEEEEcCCCC
Confidence 3665 67999999999998 8899999999999999999999999995 9
Q ss_pred ccccCcceEEEe
Q psy8713 294 ECGIESSITAGV 305 (309)
Q Consensus 294 ~cgi~~~~~~~~ 305 (309)
.|||++.+++++
T Consensus 303 ~CgI~~~~~~p~ 314 (315)
T 2c0y_A 303 HCGIASFPSYPE 314 (315)
T ss_dssp GGGTTTSCEEEE
T ss_pred ccCcCceeEEee
Confidence 999999988764
No 8
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=6.8e-50 Score=375.78 Aligned_cols=238 Identities=20% Similarity=0.403 Sum_probs=171.8
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHH-HhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKS-WMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWP 95 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~ 95 (309)
++....++|.+||...+.+-.+|++|+|+|+|++.|||++ ++|.++.. +. ...... .....+||++||||++
T Consensus 34 iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~--~~--~~~~~~-~~~~~~lP~~~DwR~~-- 106 (316)
T 1cs8_A 34 VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRK--PR--KGKVFQ-EPLFYEAPRSVDWREK-- 106 (316)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCC--CS--CCEECC-CCTTCCCCSCEEGGGG--
T ss_pred HHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCc--cc--cCcccc-CccccCCCCcEecCCC--
Confidence 4677788999999765444469999999999999988875 55554322 11 111111 1224579999999999
Q ss_pred CCCCCccccCccCCCCCc--------------------CCCccccCCCC---------CCCCC--------CCCCCCCCC
Q psy8713 96 NCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE---------HHVNG--------TRPSCDASK 138 (309)
Q Consensus 96 ~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~---------~~~~g--------~~~~C~~~~ 138 (309)
|+|+||||||.||||| ..|++++.+|. ++... ..+.+.+..
T Consensus 107 --g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~a~~yi~~~~Gi~~e~~ 184 (316)
T 1cs8_A 107 --GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEES 184 (316)
T ss_dssp --TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTTT
T ss_pred --CCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCcCchhc
Confidence 8999999999999999 34555555554 22100 112233334
Q ss_pred CCCcccccccccCccccccccccceee-eeeecchHHHHHHHHHhcCCEEEEEecc-cccccCCCceEeCCCCcchhhhh
Q psy8713 139 GHTPKCVRECQENYDVPYKKDLNFGAK-SYSVSSNEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRFFVPGNETTAMSL 216 (309)
Q Consensus 139 ~~~~~~~~~c~~~~~~~~~~~~~~~~~-~~~v~~~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy~~~~~~~~~~~~ 216 (309)
+|+......|...... ..+.+. .+.++.++++||++|+++|||+|+|.++ ++|+.|++|||..|
T Consensus 185 yPY~~~~~~C~~~~~~-----~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~--------- 250 (316)
T 1cs8_A 185 YPYEATEESCKYNPKY-----SVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP--------- 250 (316)
T ss_dssp SCCCSSCCCCCCCGGG-----EEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEECCT---------
T ss_pred cCCCCCCCCcCCCCcc-----ceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCChhhccccCceECCC---------
Confidence 5554444556422110 112222 3356668999999999999999999997 58999999999842
Q ss_pred hhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEee---ccCCCCccEEEEEcCCCCCCCCCceEEEEccC-
Q psy8713 217 IKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWG---EDEKSKEKYWLIANSWNTDWGDNGLFKILRGK- 292 (309)
Q Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg---~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~- 292 (309)
.|+...++|||+||||| ++ .++++|||||||||++|||+|||||+|+.
T Consensus 251 ---------------------------~c~~~~~~HaV~iVGygd~~~~-~~g~~yWivkNSWG~~WGe~GY~~i~r~~~ 302 (316)
T 1cs8_A 251 ---------------------------DCSSEDMDHGVLVVGYGFESTE-SDNNKYWLVKNSWGEEWGMGGYVKMAKDRR 302 (316)
T ss_dssp ---------------------------TCCSSCCCEEEEEEEEEEECCS-SCCEEEEEEECSBCTTSTBTTEEEEECSSS
T ss_pred ---------------------------CCCCCCCCEEEEEEEecCCccc-CCCCcEEEEEcCCCCCcccCCEEEEECCCC
Confidence 36666689999999999 44 26889999999999999999999999997
Q ss_pred CccccCcceEEEe
Q psy8713 293 DECGIESSITAGV 305 (309)
Q Consensus 293 n~cgi~~~~~~~~ 305 (309)
|.|||++.+++++
T Consensus 303 n~CgI~~~~~~p~ 315 (316)
T 1cs8_A 303 NHCGIASAASYPT 315 (316)
T ss_dssp SGGGTTTSCEEEC
T ss_pred CccCccceeeEee
Confidence 8999999988764
No 9
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=2.3e-49 Score=377.32 Aligned_cols=232 Identities=24% Similarity=0.380 Sum_probs=159.3
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHH-hCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSW-MGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWP 95 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~ 95 (309)
+|....++|.+||.. ..+|++|+|+|+|++.|||+++ +|..+... ................+||++||||++
T Consensus 89 iF~~Nl~~I~~~N~~----~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lP~s~DWR~~-- 161 (363)
T 3tnx_A 89 IFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKYTGSIAGNY-TTTELSYEEVLNDGDVNIPEYVDWRQK-- 161 (363)
T ss_dssp HHHHHHHHHHHHTTS----CCSEEECSCTTTTSCHHHHHHHHSCSSCSCC-CCSSSSSSCCCCCSCCCCCSCEEGGGG--
T ss_pred HHHHHHHHHHHHHcC----CCCeEEeccccccCCHHHHHHHhcccccccc-cccccccccccCcccCCCCcceecccC--
Confidence 466778899999853 3699999999999988888765 45443321 111111111122335689999999999
Q ss_pred CCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCC--------------CCCCCCCCCCCC
Q psy8713 96 NCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNG--------------TRPSCDASKGHT 141 (309)
Q Consensus 96 ~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g--------------~~~~C~~~~~~~ 141 (309)
|+|+||||||.||||| ..|+|++.+|.....| ..+.+.+..+|+
T Consensus 162 --g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY 239 (363)
T 3tnx_A 162 --GAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPY 239 (363)
T ss_dssp --TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHTCBCBTTTSCC
T ss_pred --CCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCCCCCCCCCChHHHHhHHHhcCccccccCCC
Confidence 9999999999999999 4456666666542211 111222333555
Q ss_pred cccccccccCccccccccccceee-eeeecchHHHHHHHHHhcCCEEEEEecc-cccccCCCceEeCCCCcchhhhhhhh
Q psy8713 142 PKCVRECQENYDVPYKKDLNFGAK-SYSVSSNEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRFFVPGNETTAMSLIKW 219 (309)
Q Consensus 142 ~~~~~~c~~~~~~~~~~~~~~~~~-~~~v~~~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy~~~~~~~~~~~~~~~ 219 (309)
..+...|......+ ...... ...+++..+.+++++..+|||+|++++. ++|++|++|||.
T Consensus 240 ~~~~~~c~~~~~~~----~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~-------------- 301 (363)
T 3tnx_A 240 EGVQRYCRSREKGP----YAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFV-------------- 301 (363)
T ss_dssp CSSCCCCCGGGGCS----CSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHTEEEEEEC--------------
T ss_pred cCcCCCcccCCCCC----ceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhhhCCCCCEEC--------------
Confidence 55544443211111 111222 2244444444445555679999999874 789999999998
Q ss_pred hhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCC----cc
Q psy8713 220 TIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKD----EC 295 (309)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n----~c 295 (309)
..|+.. .||||+|||||++ |||||||||++|||+|||||+||.| .|
T Consensus 302 -----------------------~~~~~~-lnHaV~iVGyG~~------YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~C 351 (363)
T 3tnx_A 302 -----------------------GPCGNK-VDHAVAAVGYGPN------YILIRNSWGTGWGENGYIRIKRGTGNSYGVC 351 (363)
T ss_dssp -----------------------CCCCSC-CCEEEEEEEEETT------EEEEECSBCTTSTBTTEEEEECCSCCSSCGG
T ss_pred -----------------------CCCCCC-CCeEEEEEEcCCC------cEEEEeCCCCccccCcEEEEEcCCCCCCCcC
Confidence 346554 5999999999975 9999999999999999999999874 59
Q ss_pred ccCcceEEEe
Q psy8713 296 GIESSITAGV 305 (309)
Q Consensus 296 gi~~~~~~~~ 305 (309)
||++.+++++
T Consensus 352 GI~~~a~yPi 361 (363)
T 3tnx_A 352 GLYTSSFYPV 361 (363)
T ss_dssp GTTSCEEEEE
T ss_pred Cccceeeecc
Confidence 9999998876
No 10
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=5.2e-49 Score=359.20 Aligned_cols=186 Identities=51% Similarity=1.065 Sum_probs=146.2
Q ss_pred CCCCceecCCCCCCCCCCccccCccCCCCCc----------------------CCCccccCC--------CCCCC-----
Q psy8713 83 DLPANFDSRTKWPNCPTIREIRDQGSCGSCW----------------------GCRPYEIAP--------CEHHV----- 127 (309)
Q Consensus 83 ~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW----------------------~cs~~~~~~--------C~~~~----- 127 (309)
+||++||||++||+|++|+||||||.||||| ..|++++.+ |.++.
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 6899999999999999999999999999999 234444444 33331
Q ss_pred -----CC--------CCCCCCCCC-------------------CCCcccccccccCccccccccccceeeeeeecchHHH
Q psy8713 128 -----NG--------TRPSCDASK-------------------GHTPKCVRECQENYDVPYKKDLNFGAKSYSVSSNEKS 175 (309)
Q Consensus 128 -----~g--------~~~~C~~~~-------------------~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~ 175 (309)
+| ....|.++. .+.+.|...|...+...+..+..+....|.++.++++
T Consensus 82 ~yi~~~Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (254)
T 3qsd_A 82 DYWVKEGIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEKA 161 (254)
T ss_dssp HHHHHTCBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHHH
T ss_pred HHHHHcCCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHHH
Confidence 00 001122221 1122344555555555556666666666777779999
Q ss_pred HHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEE
Q psy8713 176 IMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIR 255 (309)
Q Consensus 176 ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~ 255 (309)
||++|+++|||+++|.++++|+.|++|||.. .+....++|||+
T Consensus 162 i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~-------------------------------------~~~~~~~~Hav~ 204 (254)
T 3qsd_A 162 IQKEIMKYGPVEAGFTVYEDFLNYKSGIYKH-------------------------------------ITGETLGGHAIR 204 (254)
T ss_dssp HHHHHHHHCCEEEEEEEEGGGGGCCSSEECC-------------------------------------CSSCEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEeccccccccCCeecc-------------------------------------CCCCCCCCeEEE
Confidence 9999999999999999999999999999983 344556799999
Q ss_pred EEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCCccccCcceEEEeec
Q psy8713 256 ILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKDECGIESSITAGVPK 307 (309)
Q Consensus 256 iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n~cgi~~~~~~~~~~ 307 (309)
|||||++ ++++|||||||||++|||+|||||+|+.|+|||++.+++++|.
T Consensus 205 iVGyg~~--~g~~ywivkNSWG~~WG~~Gy~~i~rg~n~CgI~~~~~~~~p~ 254 (254)
T 3qsd_A 205 IIGWGVE--NKAPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVTAGRIN 254 (254)
T ss_dssp EEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSSEEEEECC
T ss_pred EEEEeec--CCeeEEEEEeCCCCCcccCCeEEEEcCCCeecCCCceEeeccC
Confidence 9999998 8899999999999999999999999999999999999999984
No 11
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=7e-49 Score=360.66 Aligned_cols=190 Identities=56% Similarity=1.123 Sum_probs=146.2
Q ss_pred CCCCCCceecCCCCCCCCCCccccCccCCCCCc----------------------CCCccccC---------CCCCCC--
Q psy8713 81 DEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW----------------------GCRPYEIA---------PCEHHV-- 127 (309)
Q Consensus 81 ~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW----------------------~cs~~~~~---------~C~~~~-- 127 (309)
..+||++||||++||+|+.|+||||||.||||| ..|++++. .|.++.
T Consensus 4 ~~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~ 83 (266)
T 3cbj_A 4 DLKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPA 83 (266)
T ss_dssp CCCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHH
T ss_pred CCCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHH
Confidence 457999999999999999999999999999999 23344444 444331
Q ss_pred --------CC-CC-------CCCCCCCC------------------CCcccccccccCccccccccccceeeeeeecchH
Q psy8713 128 --------NG-TR-------PSCDASKG------------------HTPKCVRECQENYDVPYKKDLNFGAKSYSVSSNE 173 (309)
Q Consensus 128 --------~g-~~-------~~C~~~~~------------------~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~~ 173 (309)
+| .. ..|.++.. +.+.|...|..++...+..+..+....|.++.++
T Consensus 84 ~a~~y~~~~Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (266)
T 3cbj_A 84 EAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSE 163 (266)
T ss_dssp HHHHHHHHTCBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCH
T ss_pred HHHHHHHHhCcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCH
Confidence 01 00 12222210 0112223343333334445555555567777789
Q ss_pred HHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCce
Q psy8713 174 KSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHA 253 (309)
Q Consensus 174 ~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ha 253 (309)
++||++|+++|||+++|.++++|+.|++|||. ..|+...++||
T Consensus 164 ~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~-------------------------------------~~~~~~~~~Ha 206 (266)
T 3cbj_A 164 KDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ-------------------------------------HVTGEMMGGHA 206 (266)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEEC-------------------------------------CCSSCEEEEEE
T ss_pred HHHHHHHHhcCCEEEEEEeccchhhcCCeEEe-------------------------------------cCCCCccCCeE
Confidence 99999999999999999999899999999998 33555567999
Q ss_pred EEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCCccccCcceEEEeecCC
Q psy8713 254 IRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKDECGIESSITAGVPKLD 309 (309)
Q Consensus 254 V~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n~cgi~~~~~~~~~~~~ 309 (309)
|+|||||++ ++++|||||||||++|||+|||||+|+.|.|||++.+++++|++|
T Consensus 207 V~iVGyg~~--~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgI~~~~~~~~p~~~ 260 (266)
T 3cbj_A 207 IRILGWGVE--NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTD 260 (266)
T ss_dssp EEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCCC
T ss_pred EEEEEeccc--CCceEEEEEcCCCCccCCCCEEEEEcCCCcccccCceEEEEeecc
Confidence 999999998 889999999999999999999999999999999999999999986
No 12
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=5.6e-49 Score=383.42 Aligned_cols=245 Identities=28% Similarity=0.483 Sum_probs=136.1
Q ss_pred cchHHHHHHHHhccccCCCCCCcccc-cccCCCCcHHHHHHHhCCCCCCCCCCC-CCCcccccCCCCCCCCCceecCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAE-KNSLSNIPRAHLKSWMGVHPDYNLPAN-RLPELIGYSEVDEDLPANFDSRTKW 94 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g-~Nf~~~~~~e~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~lP~~~DwR~~~ 94 (309)
++....++|.+||.. + .+|+++ +|+|+|++.|||+++++...... +.. ..+..........+||++||||++
T Consensus 143 if~~N~~~I~~~N~~---~-~~~~~~~~n~faDlT~eEf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lP~s~DwR~~- 216 (441)
T 3pdf_A 143 LYKYDHNFVKAINAI---Q-KSWTATTYMEYETLTLGDMIRRSGGHSRKI-PRPKPAPLTAEIQQKILFLPTSWDWRNV- 216 (441)
T ss_dssp --------------------------------------------------------------------CCCSCEETTCB-
T ss_pred HHHHHHHHHHHHHcc---C-CceEeecccccccCCHHHHHHHhCCCcccc-cccccCccccccccccccCCCCEECCcC-
Confidence 455677788888854 2 589998 79999999999888776532211 110 001101111224679999999997
Q ss_pred CCCCCCccccCccCCCCCc----------------------CCCccccCCCCCCCCCCCCCCCCCC--------------
Q psy8713 95 PNCPTIREIRDQGSCGSCW----------------------GCRPYEIAPCEHHVNGTRPSCDASK-------------- 138 (309)
Q Consensus 95 ~~cg~vtpVkdQg~CGSCW----------------------~cs~~~~~~C~~~~~g~~~~C~~~~-------------- 138 (309)
+++++|+||||||.||||| ..|++++.+|... ...|.++.
T Consensus 217 ~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~----~~GC~GG~~~~aa~~yi~~~Gi 292 (441)
T 3pdf_A 217 HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY----AQGCEGGFPYLIAGKYAQDFGL 292 (441)
T ss_dssp TTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT----SCTTBCCCHHHHTTHHHHHTCB
T ss_pred CCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC----CCCCCCCchhHHHHHHHHhcCC
Confidence 2345899999999999999 2566666677532 22354443
Q ss_pred -----CCCcccccccccCccccccccccceeeee-ee-----cchHHHHHHHHHhcCCEEEEEecccccccCCCceEeCC
Q psy8713 139 -----GHTPKCVRECQENYDVPYKKDLNFGAKSY-SV-----SSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVP 207 (309)
Q Consensus 139 -----~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v-----~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~ 207 (309)
+|+......|..... ...+.+..| .+ ..++++||++|+++|||+|+|+++++|++|++|||..+
T Consensus 293 ~tE~~yPY~~~~~~C~~~~~-----~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~ 367 (441)
T 3pdf_A 293 VEEACFPYTGTDSPCKMKED-----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT 367 (441)
T ss_dssp CBGGGSCCCSSCCCSCCCSS-----CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC
T ss_pred CcHHHeeecccCCCCCCccc-----cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEecC
Confidence 343333334432110 111112222 22 24789999999999999999999999999999999854
Q ss_pred CCcchhhhhhhhhhcccCcccCcCCcceeccccccccCC-CccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceE
Q psy8713 208 GNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSG-KALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLF 286 (309)
Q Consensus 208 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~ 286 (309)
.+. ..+. ...++|||+|||||++..+|++|||||||||++|||+|||
T Consensus 368 ~~~--------------------------------~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYf 415 (441)
T 3pdf_A 368 GLR--------------------------------DPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYF 415 (441)
T ss_dssp -----------------------------------CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEE
T ss_pred CCC--------------------------------cccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEE
Confidence 210 0111 2457999999999986447899999999999999999999
Q ss_pred EEEccCCccccCcceEEEeecC
Q psy8713 287 KILRGKDECGIESSITAGVPKL 308 (309)
Q Consensus 287 ~i~~g~n~cgi~~~~~~~~~~~ 308 (309)
||+||.|+|||++.++++.|.+
T Consensus 416 ri~rg~n~CGI~s~~~a~~P~~ 437 (441)
T 3pdf_A 416 RIRRGTDECAIESIAVAATPIP 437 (441)
T ss_dssp EEECSSCGGGTTSCCEEEEECC
T ss_pred EEEcCCCccCCCCceEEeeccC
Confidence 9999999999999999999864
No 13
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.1e-48 Score=366.39 Aligned_cols=233 Identities=25% Similarity=0.368 Sum_probs=167.2
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHHh-CCCCCCCCCCC-CCCcccccCCCCCCCCCceecCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSWM-GVHPDYNLPAN-RLPELIGYSEVDEDLPANFDSRTKW 94 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~l-g~~~~~~~~~~-~~~~~~~~~~~~~~lP~~~DwR~~~ 94 (309)
++....++|.+||.. + .+|++|+|+|+|++.|||++++ |.++.. +.. ....... .....+||++||||++
T Consensus 45 iF~~N~~~I~~~N~~---~-~~~~~g~N~FaDlt~eEf~~~~~g~~~~~--~~~~~~~~~~~-~~~~~~lP~~~DwR~~- 116 (322)
T 1pci_A 45 IFKDNLNYIDETNKK---N-NSYWLGLNEFADLSNDEFNEKYVGSLIDA--TIEQSYDEEFI-NEDIVNLPENVDWRKK- 116 (322)
T ss_dssp HHHHHHHHHHHHHTT---C-CSEEECSCTTTTSCHHHHHHHHCCCBCCC--SSCCCCSEECC-CCCCCCSCSCEETTTT-
T ss_pred HHHHHHHHHHHhhcc---C-CceEEecCccccCCHHHHHHHhcCCCCcc--ccccccccccc-cccccCCCCeEecccC-
Confidence 456677788888864 3 5899999999999988887655 544322 110 0011111 1123579999999999
Q ss_pred CCCCCCccccCccCCCCCc--------------------CCCccccCCCCCC---CCC-----------CCCCCCCCCCC
Q psy8713 95 PNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHH---VNG-----------TRPSCDASKGH 140 (309)
Q Consensus 95 ~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~---~~g-----------~~~~C~~~~~~ 140 (309)
|+|+||||||.||||| ..|++++.+|... .+| ..+.+.+..+|
T Consensus 117 ---g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~yP 193 (322)
T 1pci_A 117 ---GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYP 193 (322)
T ss_dssp ---TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCTTSCGGGCBCHHHHHHHHHHHCBCBTTTSC
T ss_pred ---CCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhCCCchhhCC
Confidence 8999999999999999 4456666666531 111 01133334456
Q ss_pred CcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCceEeCCCCcchhhhhh
Q psy8713 141 TPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRFFVPGNETTAMSLI 217 (309)
Q Consensus 141 ~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy~~~~~~~~~~~~~ 217 (309)
+......|..... ....+.+..| .++. ++++||++|+. |||+|+|.++ ++|+.|++|||.
T Consensus 194 Y~~~~~~C~~~~~----~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~------------ 256 (322)
T 1pci_A 194 YKAKQGTCRAKQV----GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFE------------ 256 (322)
T ss_dssp CCSSCCCCTTTTC----CSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEEEC------------
T ss_pred CCCCCCCCCCCCC----CCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeEeC------------
Confidence 6555556653211 0012223333 5554 78899999986 9999999997 789999999998
Q ss_pred hhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC----C
Q psy8713 218 KWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK----D 293 (309)
Q Consensus 218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~----n 293 (309)
..|+.. .+|||+|||||++ +|++|||||||||++|||+|||||+|+. |
T Consensus 257 -------------------------~~c~~~-~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n 308 (322)
T 1pci_A 257 -------------------------GPCGTK-VDGAVTAVGYGKS--GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPG 308 (322)
T ss_dssp -------------------------CSCCSC-CCEEEEEEEEEEE--TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSC
T ss_pred -------------------------CCCCCC-CCEEEEEEEEecc--CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCC
Confidence 346654 5999999999998 7899999999999999999999999996 8
Q ss_pred ccccCcceEEEe
Q psy8713 294 ECGIESSITAGV 305 (309)
Q Consensus 294 ~cgi~~~~~~~~ 305 (309)
.|||++.+++++
T Consensus 309 ~CgI~~~~~yp~ 320 (322)
T 1pci_A 309 VCGLYKSSYYPT 320 (322)
T ss_dssp GGGGGGCCEEEC
T ss_pred cCCcccceeEEE
Confidence 999999988765
No 14
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-47 Score=359.28 Aligned_cols=225 Identities=22% Similarity=0.392 Sum_probs=163.6
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHH-HhCCCCCCCCCCCCCCcccccC----CCCCCCCCceecC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKS-WMGVHPDYNLPANRLPELIGYS----EVDEDLPANFDSR 91 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~-~lg~~~~~~~~~~~~~~~~~~~----~~~~~lP~~~DwR 91 (309)
++....++|.+ |. + |+|+|+|++.|||++ ++|..... +........... ....+||++||||
T Consensus 31 iF~~N~~~I~~-N~------~----g~N~F~Dlt~eEf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lP~~~DwR 97 (312)
T 1xkg_A 31 NFLESVKYVQS-NG------G----AINHLSDLSLDEFKNRFLMSAEAF--EHLKTQFDLNAETNACSINGNAPAEIDLR 97 (312)
T ss_dssp HHHHHHHHHHH-HC------C----CCCTTTTSCHHHHHHHHSBCHHHH--HHHHHHHC-----CBCCCCSCCCSCEETT
T ss_pred HHHHHHHHHHh-cc------C----CCCcccCCCHHHHHHHhcCCCCcc--ccccCCcccccccccccccccCCCccccc
Confidence 45566667777 31 1 999999999999988 67632111 000000000000 0123799999999
Q ss_pred CCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCCCC-------------
Q psy8713 92 TKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDASK------------- 138 (309)
Q Consensus 92 ~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~~~------------- 138 (309)
++ |+|+||||||.||||| ..|++++.+|.. ...|.++.
T Consensus 98 ~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~-----~~GC~GG~~~~a~~yi~~~Gi 168 (312)
T 1xkg_A 98 QM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS-----QHGCHGDTIPRGIEYIQHNGV 168 (312)
T ss_dssp TT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-----SSTTBCCCHHHHHHHHHHHCE
T ss_pred cC----CCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC-----CCCCCCCCHHHHHHHHHHcCC
Confidence 99 8999999999999999 456677777751 02355443
Q ss_pred -----CCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHh-cCCEEEEEeccc--ccccCCCceEeCCC
Q psy8713 139 -----GHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYE-HGPVEGAFTVFD--DLILYKSGRFFVPG 208 (309)
Q Consensus 139 -----~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~-~GPv~v~~~~~~--~f~~Y~sGiy~~~~ 208 (309)
+|+......|. .. ....+.+..| .++. ++++||++|++ +|||+|+|.++. +|+.|++|||..|
T Consensus 169 ~~e~~yPY~~~~~~C~-~~-----~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~- 241 (312)
T 1xkg_A 169 VQESYYRYVAREQSCR-RP-----NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQR- 241 (312)
T ss_dssp EBGGGSCCCSSCCCCC-CC-----SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCC-
T ss_pred CccccCCccCCCCCCC-CC-----CCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcCC-
Confidence 35444344554 11 1122333344 5653 89999999999 999999999987 8999999999852
Q ss_pred CcchhhhhhhhhhcccCcccCcCCcceeccccccccCC-CccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEE
Q psy8713 209 NETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSG-KALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFK 287 (309)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~ 287 (309)
.|+ ... +|||+|||||++ +|++|||||||||++|||+||||
T Consensus 242 -----------------------------------~c~~~~~-~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~~ 283 (312)
T 1xkg_A 242 -----------------------------------DNGYQPN-YHAVNIVGYSNA--QGVDYWIVRNSWDTNWGDNGYGY 283 (312)
T ss_dssp -----------------------------------CCSSCCE-EEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEE
T ss_pred -----------------------------------CCCCCcC-ceEEEEEEEecc--CCceEEEEEeCCCCcccCCcEEE
Confidence 365 446 999999999998 88999999999999999999999
Q ss_pred EEccCCccccCcceEEEeecC
Q psy8713 288 ILRGKDECGIESSITAGVPKL 308 (309)
Q Consensus 288 i~~g~n~cgi~~~~~~~~~~~ 308 (309)
|+|+.|.|||++.+++++|..
T Consensus 284 i~r~~n~CgI~~~~~~~~~~~ 304 (312)
T 1xkg_A 284 FAANIDLMMIEEYPYVVILGQ 304 (312)
T ss_dssp EECSSCGGGTTTCCEEEECTT
T ss_pred EEcCCCcccccceeEEeeccC
Confidence 999999999999999998864
No 15
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2.3e-45 Score=327.09 Aligned_cols=179 Identities=27% Similarity=0.554 Sum_probs=135.7
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCC---CC-----------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHV---NG----------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~---~g----------- 129 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|.... ++
T Consensus 1 lP~~~DwR~~----~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~ 76 (214)
T 1m6d_A 1 APPEWDWRSK----GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIK 76 (214)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 7999999999 9999999999999999 44556555564310 01
Q ss_pred C-CCCCCCCCCCCcccccccccCccccccccccceeeeeeecchHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCC
Q psy8713 130 T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSYSVSSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPG 208 (309)
Q Consensus 130 ~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~ 208 (309)
. .+.+.+..+|+......|..... +...+....+.++.++++||++|+++|||+++|.++ .|++|++|||..+.
T Consensus 77 ~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~-~f~~Y~~Giy~~~~ 151 (214)
T 1m6d_A 77 NLGGLETEDDYSYQGHMQSCQFSAE----KAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLR 151 (214)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCCCGG----GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTH-HHHHCCSSEECCCG
T ss_pred HhcCcccccCcCcCCCCCcCCCCcc----cceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEec-hhhhcCCceecCCC
Confidence 0 12233334455444445542211 112223334466678999999999999999999997 59999999998421
Q ss_pred CcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEE
Q psy8713 209 NETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKI 288 (309)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i 288 (309)
..|+...++|||+|||||++ ++++|||||||||++|||+|||||
T Consensus 152 ----------------------------------~~c~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~Gy~~i 195 (214)
T 1m6d_A 152 ----------------------------------PLCSPWLIDHAVLLVGYGQR--SDVPFWAIKNSWGTDWGEKGYYYL 195 (214)
T ss_dssp ----------------------------------GGSCTTCCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTEEEE
T ss_pred ----------------------------------CcCCCCcCCEEEEEEEEeec--CCcEEEEEEeCCCCCcccCcEEEE
Confidence 23666678999999999998 789999999999999999999999
Q ss_pred EccCCccccCcceEEEeec
Q psy8713 289 LRGKDECGIESSITAGVPK 307 (309)
Q Consensus 289 ~~g~n~cgi~~~~~~~~~~ 307 (309)
+|+.|.|||++.+++++++
T Consensus 196 ~r~~n~Cgi~~~~~~~~~~ 214 (214)
T 1m6d_A 196 HRGSGACGVNTMASSAVVD 214 (214)
T ss_dssp ESSSCGGGTTTTCEEEECC
T ss_pred EcCCCccccCceeEEEEeC
Confidence 9999999999999987753
No 16
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=9.6e-45 Score=323.30 Aligned_cols=173 Identities=23% Similarity=0.511 Sum_probs=130.1
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCC--------------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNG-------------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g-------------- 129 (309)
||++||||++ |+|+||||||.||||| ..|++++.+|.....+
T Consensus 1 lP~~~Dwr~~----g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~ 76 (215)
T 3i06_A 1 APAAVDWRAR----GAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIV 76 (215)
T ss_dssp CCSEEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHH
T ss_pred CCCcccCCcC----CCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHH
Confidence 7999999999 9999999999999999 4556666666432110
Q ss_pred C--C-CCCCCCCCCCccccc---ccccCcccccccccccee-eeeeecchHHHHHHHHHhcCCEEEEEecccccccCCCc
Q psy8713 130 T--R-PSCDASKGHTPKCVR---ECQENYDVPYKKDLNFGA-KSYSVSSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSG 202 (309)
Q Consensus 130 ~--~-~~C~~~~~~~~~~~~---~c~~~~~~~~~~~~~~~~-~~~~v~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sG 202 (309)
. . +.+.+..+|+..... .|..... ...+.+ ..+.++.++++||++|+++|||+++|++ ++|+.|++|
T Consensus 77 ~~~~gGi~~e~~yPY~~~~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~-~~f~~Y~~G 150 (215)
T 3i06_A 77 QENNGAVYTEDSYPYASGEGISPPCTTSGH-----TVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDA-SSWMTYTGG 150 (215)
T ss_dssp HHSTTEEEC-CCSCCCCTTSCCCCCCCSSC-----CEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECC-TTGGGCCSS
T ss_pred HhccccccccCccCCcCCCCCCCccccCCc-----ccceEecceEEeCChHHHHHHHHHHCCCEEEEEEc-hHHhcCCCC
Confidence 0 0 122233344433221 3332111 111222 3346677899999999999999999999 789999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCC
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGD 282 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~ 282 (309)
||. . |....++|||+|||||++ ++++|||||||||++|||
T Consensus 151 iy~-------------------------------------~-~~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe 190 (215)
T 3i06_A 151 VMT-------------------------------------S-CVSEQLDHGVLLVGYNDS--AAVPYWIIKNSWTTQWGE 190 (215)
T ss_dssp EEC-------------------------------------S-CCCSCCCEEEEEEEEESS--SSSCEEEEECSBCTTSTB
T ss_pred ccc-------------------------------------C-CCCCccCcEEEEEEEecc--CCcEEEEEECCCCCCccc
Confidence 997 2 444456999999999988 789999999999999999
Q ss_pred CceEEEEccCCccccCcceEEEee
Q psy8713 283 NGLFKILRGKDECGIESSITAGVP 306 (309)
Q Consensus 283 ~Gy~~i~~g~n~cgi~~~~~~~~~ 306 (309)
+|||||+|+.|+|||++.+++++.
T Consensus 191 ~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 191 EGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp TTEEEEESSSCGGGTTSSEEEEEE
T ss_pred CceEEEecCCCeecCCCceeEEec
Confidence 999999999999999999998764
No 17
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.6e-44 Score=321.51 Aligned_cols=171 Identities=25% Similarity=0.535 Sum_probs=132.9
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDA------- 136 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~------- 136 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|... ...|.+
T Consensus 1 lP~~~Dwr~~----~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~----~~gC~GG~~~~a~ 72 (215)
T 3kwz_A 1 APDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE----NDGCGGGYMTNAF 72 (215)
T ss_dssp CTTCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT----SCTTBCCCHHHHH
T ss_pred CCCCCccCcC----CCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC----CCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 4566666666531 223443
Q ss_pred ------------CCCCCcccccccccCccccccccccceeee-eeecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCC
Q psy8713 137 ------------SKGHTPKCVRECQENYDVPYKKDLNFGAKS-YSVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKS 201 (309)
Q Consensus 137 ------------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~s 201 (309)
..+|+......|...... ..+.+.. +.++. ++++||++|+++|||+++|.++ ++|+.|++
T Consensus 73 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~-----~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~ 147 (215)
T 3kwz_A 73 QYVQKNRGIDSEDAYPYVGQEESCMYNPTG-----KAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 147 (215)
T ss_dssp HHHHHHTCEEBTTTSCCCSSCCCCCCCGGG-----EEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCS
T ss_pred HHHHHhCCccccccCCCccCCCccccCCCC-----ceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccC
Confidence 334554444455421111 1122222 34554 7899999999999999999997 68999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWG 281 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG 281 (309)
|||..+ .|+...++|||+|||||++ ++.+|||||||||++||
T Consensus 148 Giy~~~------------------------------------~~~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WG 189 (215)
T 3kwz_A 148 GVYYDE------------------------------------SCNSDNLNHAVLAVGYGIQ--KGNKHWIIKNSWGENWG 189 (215)
T ss_dssp SEECCT------------------------------------TCCTTCCCEEEEEEEEEEE--TTEEEEEEECSBCTTST
T ss_pred CeECCC------------------------------------CCCCChhhCEEEEEEEecc--CCceEEEEECCcCcccc
Confidence 999853 3555668999999999998 78999999999999999
Q ss_pred CCceEEEEccC-CccccCcceEEEe
Q psy8713 282 DNGLFKILRGK-DECGIESSITAGV 305 (309)
Q Consensus 282 ~~Gy~~i~~g~-n~cgi~~~~~~~~ 305 (309)
|+|||||+|+. |+|||++.+++++
T Consensus 190 ~~Gy~~i~r~~~n~Cgi~~~~~~p~ 214 (215)
T 3kwz_A 190 NKGYILMARNKNNACGIANLASFPK 214 (215)
T ss_dssp BTTEEEEESSSSSGGGTTSSCEEEC
T ss_pred cCCEEEEecCCCCccCcCCceeeee
Confidence 99999999998 8999999888764
No 18
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=9.1e-45 Score=324.23 Aligned_cols=175 Identities=28% Similarity=0.599 Sum_probs=134.2
Q ss_pred CCCceecCCCCCCCC-CCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCC------
Q psy8713 84 LPANFDSRTKWPNCP-TIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDA------ 136 (309)
Q Consensus 84 lP~~~DwR~~~~~cg-~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~------ 136 (309)
||++||||++ + +|+||||||.||||| ..|++++.+|.... ....|.+
T Consensus 1 lP~~~DwR~~----~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~--~~~gC~GG~~~~a 74 (220)
T 8pch_A 1 YPPSMDWRKK----GNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNF--NNHGCQGGLPSQA 74 (220)
T ss_dssp CCSCEEHHHH----SSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGG--TCCGGGCCCHHHH
T ss_pred CCCCEecCcC----CCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCcc--CCCCCCCCCHHHH
Confidence 7999999999 7 799999999999999 45566665664310 1122333
Q ss_pred -------------CCCCCcccccccccCccccccccccceee-eeeec-chHHHHHHHHHhcCCEEEEEecccccccCCC
Q psy8713 137 -------------SKGHTPKCVRECQENYDVPYKKDLNFGAK-SYSVS-SNEKSIMKEIYEHGPVEGAFTVFDDLILYKS 201 (309)
Q Consensus 137 -------------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~-~~~v~-~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~s 201 (309)
..+|+......|..... ...+.+. .+.++ .++++||++|+++|||+++|.++++|+.|++
T Consensus 75 ~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~ 149 (220)
T 8pch_A 75 FEYIRYNKGIMGEDTYPYKGQDDHCKFQPD-----KAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRK 149 (220)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSCCCCCCCGG-----GEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCS
T ss_pred HHHHHHcCCcCcccccCccCCCCCCCCCCC-----cceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCC
Confidence 33454443444532111 1112222 23454 3789999999999999999999989999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCC--ccCCceEEEEEeeccCCCCccEEEEEcCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGK--ALGGHAIRILGWGEDEKSKEKYWLIANSWNTD 279 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~ 279 (309)
|||..+ .|.. ..++|||+|||||++ ++++|||||||||++
T Consensus 150 Giy~~~------------------------------------~~~~~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~ 191 (220)
T 8pch_A 150 GIYSST------------------------------------SCHKTPDKVNHAVLAVGYGEE--NGIPYWIVKNSWGPQ 191 (220)
T ss_dssp SEECCS------------------------------------SCCCSTTTCCEEEEEEEEEEE--TTEEEEEEECSBCTT
T ss_pred CcccCC------------------------------------cCCCCCCcCCcEEEEEEEEcc--CCeeEEEEECCCCcC
Confidence 999853 2333 257999999999998 789999999999999
Q ss_pred CCCCceEEEEccCCccccCcceEEEeec
Q psy8713 280 WGDNGLFKILRGKDECGIESSITAGVPK 307 (309)
Q Consensus 280 WG~~Gy~~i~~g~n~cgi~~~~~~~~~~ 307 (309)
|||+|||||+|+.|+|||++.+++++|.
T Consensus 192 WGe~Gy~~i~r~~n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 192 WGMNGYFLIERGKNMCGLAACASYPIPL 219 (220)
T ss_dssp STBTTEEEEECSSCGGGTTTSCEEEEEC
T ss_pred cccCCEEEEEcCCCccccCCCceeEeec
Confidence 9999999999999999999999999996
No 19
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=5.3e-44 Score=319.50 Aligned_cols=175 Identities=26% Similarity=0.588 Sum_probs=132.2
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCCC------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDAS------ 137 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~~------ 137 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|.... ....|.++
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~--g~~gC~GG~~~~a~ 74 (220)
T 2xu3_A 1 APRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ--GNEGCNGGLMDYAF 74 (220)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTT--TCCTTBCCCHHHHH
T ss_pred CCCcEeCCCC----CCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCC--CCCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 44566666665310 12234443
Q ss_pred -------------CCCCcccccccccCccccccccccceeee-eeecchHHHHHHHHHhcCCEEEEEecc-cccccCCCc
Q psy8713 138 -------------KGHTPKCVRECQENYDVPYKKDLNFGAKS-YSVSSNEKSIMKEIYEHGPVEGAFTVF-DDLILYKSG 202 (309)
Q Consensus 138 -------------~~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~~~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sG 202 (309)
.+|+......|..... ...+.+.. +.++.++++||++|+++|||+++|.++ ++|+.|++|
T Consensus 75 ~y~~~~~Gi~~e~~yPY~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~G 149 (220)
T 2xu3_A 75 QYVQDNGGLDSEESYPYEATEESCKYNPK-----YSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEG 149 (220)
T ss_dssp HHHHHHTCEEBTTTSCCCSSCCCCCCCGG-----GEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSS
T ss_pred HHHHHhCCcccccccCCcccCcCccCCCC-----CcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccce
Confidence 3444444444542211 11222223 355558899999999999999999998 589999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccC--CCCccEEEEEcCCCCCC
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDE--KSKEKYWLIANSWNTDW 280 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~--~~g~~YWiikNSWG~~W 280 (309)
||..| .|+...++|||+|||||++. .++++|||||||||++|
T Consensus 150 vy~~~------------------------------------~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~W 193 (220)
T 2xu3_A 150 IYFEP------------------------------------DCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEW 193 (220)
T ss_dssp EECCT------------------------------------TCCSSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTS
T ss_pred EEcCC------------------------------------CCCCCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCc
Confidence 99842 36666689999999999421 16889999999999999
Q ss_pred CCCceEEEEccC-CccccCcceEEEe
Q psy8713 281 GDNGLFKILRGK-DECGIESSITAGV 305 (309)
Q Consensus 281 G~~Gy~~i~~g~-n~cgi~~~~~~~~ 305 (309)
||+|||||+|+. |.|||++.+++++
T Consensus 194 G~~Gy~~i~~~~~n~Cgi~~~~~~p~ 219 (220)
T 2xu3_A 194 GMGGYVKMAKDRRNHCGIASAASYPT 219 (220)
T ss_dssp TBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred ccCcEEEEecCCCCcCCccccceeee
Confidence 999999999997 8999999988765
No 20
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.9e-43 Score=315.87 Aligned_cols=175 Identities=29% Similarity=0.581 Sum_probs=132.9
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCC--------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCD-------- 135 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~-------- 135 (309)
||++||||++ +.|+||||||.||||| ..|++++.+|.... ....|.
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~--~~~gC~GG~~~~a~ 74 (220)
T 3p5u_A 1 LPDYVDWRSS----GAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ--NTRGCDGGFMTDGF 74 (220)
T ss_dssp CCSCEETTTT----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCS--SCCTTBCCCHHHHH
T ss_pred CCCCCcCCcC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCC--CCCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 45566655564321 122333
Q ss_pred -----------CCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCC
Q psy8713 136 -----------ASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKS 201 (309)
Q Consensus 136 -----------~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~s 201 (309)
+..+|+......|..... ....+.+..| .++. ++++||++| ++|||+++|.++ ++|+.|++
T Consensus 75 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~ 149 (220)
T 3p5u_A 75 QFIINNGGINTEANYPYTAEEGQCNLDLQ----QEKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSS 149 (220)
T ss_dssp HHHHHHTCBCBTTTSCCCSSCCCCCHHHH----TCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCS
T ss_pred HHHHHhCCcCcccccccccCCCCcCcCCC----CCceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccC
Confidence 334555544445542111 0112333333 4543 677888877 789999999996 78999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWG 281 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG 281 (309)
|||. ..|+.. .+|||+|||||++ ++++|||||||||++||
T Consensus 150 Giy~-------------------------------------~~~~~~-~~HaV~iVGyg~~--~g~~yWivkNSWG~~WG 189 (220)
T 3p5u_A 150 GIFT-------------------------------------GPCGTA-VDHAVTIVGYGTE--GGIDYWIVKNSWGTTWG 189 (220)
T ss_dssp SEEC-------------------------------------CCCCCS-CCEEEEEEEEEEE--TTEEEEEEECSBCTTST
T ss_pred ceEC-------------------------------------CCCCCc-cceEEEEEEEecC--CCceEEEEECCCCCCcc
Confidence 9998 346554 5999999999988 88999999999999999
Q ss_pred CCceEEEEccCC---ccccCcceEEEeecCC
Q psy8713 282 DNGLFKILRGKD---ECGIESSITAGVPKLD 309 (309)
Q Consensus 282 ~~Gy~~i~~g~n---~cgi~~~~~~~~~~~~ 309 (309)
|+|||||+|+.| .|||++.++++++..|
T Consensus 190 e~Gy~~i~r~~~~~~~Cgi~~~~~~p~~~~~ 220 (220)
T 3p5u_A 190 EEGYMRIQRNVGGVGQCGIAKKASYPVKYYN 220 (220)
T ss_dssp BTTEEEEECCCCTTCGGGTTSSCEEEECSCC
T ss_pred cCCEEEEECCCCCCCccCcccccceEEEecC
Confidence 999999999986 9999999999988765
No 21
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.1e-43 Score=317.73 Aligned_cols=172 Identities=26% Similarity=0.513 Sum_probs=134.8
Q ss_pred CCCCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCCCC--
Q psy8713 81 DEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDASK-- 138 (309)
Q Consensus 81 ~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~~~-- 138 (309)
..+||++||||++ ++|+||||||.||||| ..|++++.+|.. ...|.++.
T Consensus 7 ~~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-----~~gC~GG~~~ 77 (222)
T 3f5v_A 7 NGNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS-----QHGCHGDTIP 77 (222)
T ss_dssp CCCCCSCEEHHHH----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-----SSTTBCCCHH
T ss_pred ccCCCCCCCCccC----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC-----CCCCCCCCHH
Confidence 4579999999999 9999999999999999 556677777754 22355443
Q ss_pred ----------------CCCcccccccccCccccccccccceeeee-ee-cchHHHHHHHHHh-cCCEEEEEec--ccccc
Q psy8713 139 ----------------GHTPKCVRECQENYDVPYKKDLNFGAKSY-SV-SSNEKSIMKEIYE-HGPVEGAFTV--FDDLI 197 (309)
Q Consensus 139 ----------------~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v-~~~~~~ik~~l~~-~GPv~v~~~~--~~~f~ 197 (309)
+|+......|... ....+.+..| .+ +.++++||++|++ +|||+++|.+ .++|+
T Consensus 78 ~a~~~~~~~Gi~~e~~yPY~~~~~~C~~~------~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~ 151 (222)
T 3f5v_A 78 RGIEYIQHNGVVQESYYRYVAREQSCRRP------NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFR 151 (222)
T ss_dssp HHHHHHHHHCEEBGGGSCCCSSCCCCCCC------SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHH
T ss_pred HHHHHHHHcCCCchhhCCCcccCCCccCC------cCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhh
Confidence 4544444445411 1122333333 44 3588999999999 8999999998 46899
Q ss_pred cCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCC
Q psy8713 198 LYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWN 277 (309)
Q Consensus 198 ~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG 277 (309)
.|++|+|.. ..+....++|||+|||||++ ++++|||||||||
T Consensus 152 ~Y~~gi~~~------------------------------------~~~~~~~~~HaV~iVGyg~~--~g~~ywivkNSWG 193 (222)
T 3f5v_A 152 HYDGRTIIQ------------------------------------RDNGYQPNYHAVNIVGYSNA--QGVDYWIVRNSWD 193 (222)
T ss_dssp TCCSSSCBC------------------------------------CCCSSSCEEEEEEEEEEEEE--TTEEEEEEECSBC
T ss_pred ccCCCceec------------------------------------CCCCCCccCcEEEEEEEecc--CCCEEEEEEcCCC
Confidence 999998863 23445667999999999998 8899999999999
Q ss_pred CCCCCCceEEEEccCCccccCcceEEEe
Q psy8713 278 TDWGDNGLFKILRGKDECGIESSITAGV 305 (309)
Q Consensus 278 ~~WG~~Gy~~i~~g~n~cgi~~~~~~~~ 305 (309)
++|||+|||||+|+.|.|||++.+++++
T Consensus 194 ~~WGe~Gy~~i~r~~n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 194 TNWGDNGYGYFAANIDLMMIEEYPYVVI 221 (222)
T ss_dssp TTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCcccCCEEEEEcCCCeecCCCceeEEe
Confidence 9999999999999999999999998875
No 22
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.4e-43 Score=316.07 Aligned_cols=173 Identities=25% Similarity=0.581 Sum_probs=131.4
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDA------- 136 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~------- 136 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|..... ....|.+
T Consensus 2 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~-~~~gC~GG~~~~a~ 76 (218)
T 3ovx_A 2 LPDSVDWREK----GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY-GNKGCNGGFMTTAF 76 (218)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG-TCCGGGCCCHHHHH
T ss_pred CCCCCCcccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcC-CCCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 455666666651100 1222333
Q ss_pred ------------CCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCC
Q psy8713 137 ------------SKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKS 201 (309)
Q Consensus 137 ------------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~s 201 (309)
..+|+......|...... ..+.+..| .++. ++++||++|+++|||+++|++. ++|+.|++
T Consensus 77 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~-----~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~ 151 (218)
T 3ovx_A 77 QYIIDNKGIDSDASYPYKAMDQKCQYDSKY-----RAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRS 151 (218)
T ss_dssp HHHHHHTCEEBTTTSCCCSSCCCCCCCGGG-----EEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCS
T ss_pred HHHHHhCCcCcccccCccCCCCcccCCCcc-----ceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccC
Confidence 334554444455422111 11222223 4443 7889999999999999999997 58999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWG 281 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG 281 (309)
|||..+ .| ...++|||+|||||++ ++++|||||||||++||
T Consensus 152 Giy~~~------------------------------------~~-~~~~~HaV~iVGyg~~--~g~~ywivkNSWG~~WG 192 (218)
T 3ovx_A 152 GVYYEP------------------------------------SC-TQNVNHGVLVVGYGDL--NGKEYWLVKNSWGHNFG 192 (218)
T ss_dssp SEECCT------------------------------------TC-CSCCCEEEEEEEEEEE--TTEEEEEEECSBCTTST
T ss_pred ceecCC------------------------------------CC-CcccCcEEEEEEEecc--CCceEEEEECCCCCccc
Confidence 999853 34 4457999999999998 78999999999999999
Q ss_pred CCceEEEEccC-CccccCcceEEEe
Q psy8713 282 DNGLFKILRGK-DECGIESSITAGV 305 (309)
Q Consensus 282 ~~Gy~~i~~g~-n~cgi~~~~~~~~ 305 (309)
|+|||||+|+. |.|||++.+++++
T Consensus 193 ~~Gy~~i~~~~~n~cgi~~~~~~p~ 217 (218)
T 3ovx_A 193 EEGYIRMARNKGNHCGIASFPSYPE 217 (218)
T ss_dssp BTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred cCCEEEEecCCCCcccccCceeeee
Confidence 99999999998 9999999988765
No 23
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=5.6e-43 Score=318.03 Aligned_cols=176 Identities=21% Similarity=0.411 Sum_probs=133.0
Q ss_pred CCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCC-------CCCCC------
Q psy8713 83 DLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE-------HHVNG------ 129 (309)
Q Consensus 83 ~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~-------~~~~g------ 129 (309)
+||++||||++ ++|+||||||.||||| ..|++++.+|. ++...
T Consensus 1 ~lP~~~DwR~~----g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~ 76 (246)
T 2b1m_A 1 DAPESWDWSKK----GVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWV 76 (246)
T ss_dssp -CCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHH
T ss_pred CCCCcCCCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHH
Confidence 48999999999 8999999999999999 34555555554 32100
Q ss_pred -CC-CCCCCCCCCCcccccccccCccccccccccceeee----eeecc-hHHHHHHHHHh---cCCEEEEEecccccccC
Q psy8713 130 -TR-PSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKS----YSVSS-NEKSIMKEIYE---HGPVEGAFTVFDDLILY 199 (309)
Q Consensus 130 -~~-~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~----~~v~~-~~~~ik~~l~~---~GPv~v~~~~~~~f~~Y 199 (309)
.. +.+.+..+|+......|..... ...+.+.. +.++. ++++||++|++ +|||+++|.+ ++|+.|
T Consensus 77 ~~~~Gi~~e~~yPY~~~~~~C~~~~~-----~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~-~~f~~Y 150 (246)
T 2b1m_A 77 VKHGGIASEADYPYKARDGKCKANEI-----QDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA-KDFHFY 150 (246)
T ss_dssp HHTTCBCBTTTSCCCSSCCCCCGGGC-----CCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC-TTGGGC
T ss_pred HHhCCcCccccccccCCCCcCcCCCC-----CCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc-chhhcc
Confidence 11 3344444565544455643211 11222333 34553 78899999999 6999999999 899999
Q ss_pred CCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCcc-CCceEEEEEeeccCCCCccEEEEEcCCCC
Q psy8713 200 KSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKAL-GGHAIRILGWGEDEKSKEKYWLIANSWNT 278 (309)
Q Consensus 200 ~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~HaV~iVGyg~~~~~g~~YWiikNSWG~ 278 (309)
++|||..+ .|+... ++|||+|||||++ ++++|||||||||+
T Consensus 151 ~~Giy~~~------------------------------------~c~~~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~ 192 (246)
T 2b1m_A 151 SGGIYDGG------------------------------------NCSSPYGINHFVLIVGYGSE--DGVDYWIAKNSWGE 192 (246)
T ss_dssp CSSEECCT------------------------------------TCCSSCCCCEEEEEEEEEEE--TTEEEEEEECSBCT
T ss_pred cceeecCC------------------------------------CCCCCCcCceEEEEEEEecc--CCceEEEEEeCCCC
Confidence 99999842 465553 7999999999998 78999999999999
Q ss_pred CCCCCceEEEEccC----CccccCcceEEEee
Q psy8713 279 DWGDNGLFKILRGK----DECGIESSITAGVP 306 (309)
Q Consensus 279 ~WG~~Gy~~i~~g~----n~cgi~~~~~~~~~ 306 (309)
+|||+|||||+|+. |.|||++.+++++.
T Consensus 193 ~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 193 DWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp TSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred cccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 99999999999997 89999999887764
No 24
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=7.1e-43 Score=311.48 Aligned_cols=169 Identities=31% Similarity=0.549 Sum_probs=129.8
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDA------- 136 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~------- 136 (309)
||++||||++ +.|+||||||.||||| ..|++++.+|... ...|.+
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~----~~gC~GG~~~~a~ 72 (216)
T 1ppo_A 1 LPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR----SHGCKGGYPPYAL 72 (216)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS----SCTTBCCCHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCC----CCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 4556666666531 122433
Q ss_pred -----------CCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCc
Q psy8713 137 -----------SKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSG 202 (309)
Q Consensus 137 -----------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sG 202 (309)
..+|+......|..... ....+.+..| .++. ++++||++|++ |||+++|.++ ++|+.|++|
T Consensus 73 ~yi~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~G 147 (216)
T 1ppo_A 73 EYVAKNGIHLRSKYPYKAKQGTCRAKQV----GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGG 147 (216)
T ss_dssp HHHHHHCBCBTTTSCCCSSCCCCCGGGC----CSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSS
T ss_pred HHHHHhCcCccccCCccCCCCCcCCCCC----CCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCc
Confidence 33454443444542211 1123344444 4554 78899999986 9999999996 789999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCC
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGD 282 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~ 282 (309)
||. ..|+.. .+|||+|||||++ ++++|||||||||++|||
T Consensus 148 iy~-------------------------------------~~~~~~-~~HaV~iVGyg~~--~g~~ywivkNSWG~~WG~ 187 (216)
T 1ppo_A 148 IFE-------------------------------------GPCGTK-VDHAVTAVGYGKS--GGKGYILIKNSWGTAWGE 187 (216)
T ss_dssp EEC-------------------------------------CSCCSC-CCEEEEEEEEEEE--TTEEEEEEECSBCSSSTB
T ss_pred eEC-------------------------------------CCCCCC-CCEEEEEEEeecc--CCccEEEEEeCCCCCccc
Confidence 998 346554 5999999999998 789999999999999999
Q ss_pred CceEEEEccC----CccccCcceEEEe
Q psy8713 283 NGLFKILRGK----DECGIESSITAGV 305 (309)
Q Consensus 283 ~Gy~~i~~g~----n~cgi~~~~~~~~ 305 (309)
+|||||+|+. |.|||++.+++++
T Consensus 188 ~Gy~~i~~~~~~~~n~Cgi~~~~~~p~ 214 (216)
T 1ppo_A 188 KGYIRIKRAPGNSPGVCGLYKSSYYPT 214 (216)
T ss_dssp TTEEEEECCCSSSSCGGGTTSCCEEEE
T ss_pred CcEEEEEcCCCCCCCcCccccceeeEe
Confidence 9999999985 8999999988765
No 25
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=5.3e-43 Score=313.48 Aligned_cols=174 Identities=25% Similarity=0.545 Sum_probs=131.2
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCC---CC-----------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHV---NG----------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~---~g----------- 129 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|.... .|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~ 76 (222)
T 3u8e_A 1 APASIDWRKK----GAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVI 76 (222)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHH
T ss_pred CCCcCcCCcC----CCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHH
Confidence 7999999999 8999999999999999 44555555554310 01
Q ss_pred CC-CCCCCCCCCCcccccccccCccccccccccceeeee-eecchHHHHHHHHHhcCCEEEEEeccc-ccccCCC-ceEe
Q psy8713 130 TR-PSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSSNEKSIMKEIYEHGPVEGAFTVFD-DLILYKS-GRFF 205 (309)
Q Consensus 130 ~~-~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~~~~~ik~~l~~~GPv~v~~~~~~-~f~~Y~s-Giy~ 205 (309)
.. +.+.+..+|+......|..... ..+.+..| .++.++++||++| ++|||+++|.++. +|+.|++ |||.
T Consensus 77 ~~~Gi~~e~~yPY~~~~~~C~~~~~------~~~~i~~~~~v~~~~~~i~~~l-~~GPV~v~i~~~~~~f~~Y~~~Giy~ 149 (222)
T 3u8e_A 77 TNGGIASDANYPYTGVDGTCDLNKP------IAARIDGYTNVPNSSSALLDAV-AKQPVSVNIYTSSTSFQLYTGPGIFA 149 (222)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCCCSC------CCBCCCEEEECCSCHHHHHHHH-HHSCEEEEECCCSHHHHTCCCSSCBC
T ss_pred HcCCccchhcCCCcccCCccccCCC------CeEEEccEEEeCCcHHHHHHHH-hCCCEEEEEEecChhhhcEeCCceEC
Confidence 11 3344444555544455543221 12333333 5556888999999 5799999999984 8999999 9998
Q ss_pred CCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCC--ccCCceEEEEEeeccCCC-CccEEEEEcCCCCCCCC
Q psy8713 206 VPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGK--ALGGHAIRILGWGEDEKS-KEKYWLIANSWNTDWGD 282 (309)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~HaV~iVGyg~~~~~-g~~YWiikNSWG~~WG~ 282 (309)
.+ .|+. ..++|||+|||||++ . +++|||||||||++|||
T Consensus 150 ~~------------------------------------~~~~~~~~~~HaV~iVGyg~~--~~g~~yWivkNSWG~~WGe 191 (222)
T 3u8e_A 150 GS------------------------------------SCSDDPATVDHTVLIVGYGSN--GTNADYWIVKNSWGTEWGI 191 (222)
T ss_dssp CT------------------------------------TCCCCGGGCCEEEEEEEEEES--STTCEEEEEECSBCTTSTB
T ss_pred CC------------------------------------cccCCCCcCCEEEEEEEEeec--CCCCcEEEEECCCCCCccc
Confidence 42 3544 357999999999988 5 89999999999999999
Q ss_pred CceEEEEccCC----ccccCcceEEEee
Q psy8713 283 NGLFKILRGKD----ECGIESSITAGVP 306 (309)
Q Consensus 283 ~Gy~~i~~g~n----~cgi~~~~~~~~~ 306 (309)
+|||||+|+.| .|||++.+++++.
T Consensus 192 ~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 192 DGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp TTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 99999999987 9999999987653
No 26
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=9.7e-43 Score=311.64 Aligned_cols=174 Identities=27% Similarity=0.571 Sum_probs=130.6
Q ss_pred CCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCC---CCC----------
Q psy8713 83 DLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHH---VNG---------- 129 (309)
Q Consensus 83 ~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~---~~g---------- 129 (309)
+||++||||++ +.|+||||||.||||| ..|++++.+|... ..+
T Consensus 2 ~lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~ 77 (221)
T 1cqd_A 2 DLPDSIDWREN----GAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFI 77 (221)
T ss_dssp -CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHH
T ss_pred CCCCcCcCCCC----CCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHH
Confidence 58999999999 8999999999999999 4456665556431 001
Q ss_pred -C-CCCCCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCceE
Q psy8713 130 -T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGRF 204 (309)
Q Consensus 130 -~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGiy 204 (309)
. .+.+.+..+|+......|..... ...+.+..| .++. ++++||++|++ |||+++|.++ ++|+.|++|||
T Consensus 78 ~~~~Gi~~e~~yPY~~~~~~C~~~~~-----~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy 151 (221)
T 1cqd_A 78 VNNGGINSEETYPYRGQDGICNSTVN-----APVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIF 151 (221)
T ss_dssp HHHTSBCBTTTSCCCSSCCCCCSSSC-----CCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEE
T ss_pred HHhCCccccccCCccCCCCCcCCCCC-----CceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccc
Confidence 0 12333334555444445542211 123344444 3554 68899999875 9999999998 78999999999
Q ss_pred eCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCc
Q psy8713 205 FVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNG 284 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~G 284 (309)
. ..|+. .++|||+|||||++ ++++|||||||||++|||+|
T Consensus 152 ~-------------------------------------~~~~~-~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~G 191 (221)
T 1cqd_A 152 T-------------------------------------GSCNI-SANHALTVVGYGTE--NDKDFWIVKNSWGKNWGESG 191 (221)
T ss_dssp C-------------------------------------CCCCC-CCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTT
T ss_pred c-------------------------------------CCCCC-cCCeEEEEEEEccc--CCCcEEEEEeCCCCCcccCC
Confidence 8 34655 47999999999998 78999999999999999999
Q ss_pred eEEEEccC----CccccCcceEEEee
Q psy8713 285 LFKILRGK----DECGIESSITAGVP 306 (309)
Q Consensus 285 y~~i~~g~----n~cgi~~~~~~~~~ 306 (309)
||||+|+. |.|||++.+++++.
T Consensus 192 y~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 192 YIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999973 89999999987653
No 27
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=5.5e-43 Score=323.24 Aligned_cols=188 Identities=25% Similarity=0.491 Sum_probs=135.5
Q ss_pred CCCCCCceecCCCCCCCCCCccccCcc---CCCCCc-----------------------CCCccccCCCCCC--CCC---
Q psy8713 81 DEDLPANFDSRTKWPNCPTIREIRDQG---SCGSCW-----------------------GCRPYEIAPCEHH--VNG--- 129 (309)
Q Consensus 81 ~~~lP~~~DwR~~~~~cg~vtpVkdQg---~CGSCW-----------------------~cs~~~~~~C~~~--~~g--- 129 (309)
..+||++||||++. .+++|+|||||| .||||| ..|++++.+|... .+|
T Consensus 33 ~~~lP~~~DwR~~~-~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~~~gC~GG~~ 111 (277)
T 1deu_A 33 PADLPKSWDWRNVD-GVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGND 111 (277)
T ss_dssp GGGSCSCEETTSBT-TBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSSSEETBEECH
T ss_pred cccCCCceecccCC-CCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcCCCCCCCCCH
Confidence 45799999999982 235799999999 999999 2345555566431 000
Q ss_pred --------CCCCCCCCCCCCccccccccc-C---------ccccccccccceeeeeeecchHHHHHHHHHhcCCEEEEEe
Q psy8713 130 --------TRPSCDASKGHTPKCVRECQE-N---------YDVPYKKDLNFGAKSYSVSSNEKSIMKEIYEHGPVEGAFT 191 (309)
Q Consensus 130 --------~~~~C~~~~~~~~~~~~~c~~-~---------~~~~~~~~~~~~~~~~~v~~~~~~ik~~l~~~GPv~v~~~ 191 (309)
..+.+.+..+|+......|.. . ..........+.+..|...+++++||++|+++|||+++|.
T Consensus 112 ~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~~~~~i~~~i~~~GPV~v~i~ 191 (277)
T 1deu_A 112 LSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIM 191 (277)
T ss_dssp HHHHHHHHHTCBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEECSHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHHcCCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecCCHHHHHHHHHHcCCEEEEEe
Confidence 011222222344332233431 0 0001111122344444322468899999999999999999
Q ss_pred cccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEE
Q psy8713 192 VFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWL 271 (309)
Q Consensus 192 ~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWi 271 (309)
++++|+.|++|||.. .+....++|||+|||||++ ++++|||
T Consensus 192 ~~~~f~~Y~~GIy~~-------------------------------------~~~~~~~~HaV~iVGyg~~--~g~~YWi 232 (277)
T 1deu_A 192 ATERLANYTGGIYAE-------------------------------------YQDTTYINHVVSVAGWGIS--DGTEYWI 232 (277)
T ss_dssp CCHHHHTCCSSEECB-------------------------------------CCSCCCCCEEEEEEEEEEE--TTEEEEE
T ss_pred cccccccCcCcEECC-------------------------------------CCCCCcCCeEEEEEEeccc--CCccEEE
Confidence 998999999999984 2334467999999999998 8899999
Q ss_pred EEcCCCCCCCCCceEEEEccCC--------ccccCcceEEEeecC
Q psy8713 272 IANSWNTDWGDNGLFKILRGKD--------ECGIESSITAGVPKL 308 (309)
Q Consensus 272 ikNSWG~~WG~~Gy~~i~~g~n--------~cgi~~~~~~~~~~~ 308 (309)
||||||++|||+|||||+|+.| .||||+.+++++|++
T Consensus 233 vkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe~~~~~~~p~~ 277 (277)
T 1deu_A 233 VRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV 277 (277)
T ss_dssp EECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTTSCEEEEEECC
T ss_pred EEeCCCCccCCCcEEEEEcCCCcccccccccceeccccEeecccC
Confidence 9999999999999999999998 999999999999985
No 28
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.1e-42 Score=310.55 Aligned_cols=170 Identities=26% Similarity=0.522 Sum_probs=129.8
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDA------- 136 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~------- 136 (309)
||++||||++ +.|+||||||.||||| ..|++++.+|.. ....|.+
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~----~~~gC~GG~~~~a~ 72 (218)
T 1yal_A 1 YPQSIDWRAK----GAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK----HSYGCKGGYQTTSL 72 (218)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT----TSCTTBCCCHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC----CCCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 445666666652 1122433
Q ss_pred -----------CCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCc
Q psy8713 137 -----------SKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSG 202 (309)
Q Consensus 137 -----------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sG 202 (309)
..+|+......|..... ....+.+..| .++. ++++||++|++ |||+++|.++ ++|+.|++|
T Consensus 73 ~~~~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~G 147 (218)
T 1yal_A 73 QYVANNGVHTSKVYPYQAKQYKCRATDK----PGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSG 147 (218)
T ss_dssp HHHHHHCBCBTTTSCCCSSCCCCCGGGC----CSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSS
T ss_pred HHHHHcCCCccccccccCCCCCcccCcC----CCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCc
Confidence 33454443444542211 1122334444 4554 78889999876 9999999996 789999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCC
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGD 282 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~ 282 (309)
||. ..|+.. .+|||+|||||++ ++++|||||||||++|||
T Consensus 148 iy~-------------------------------------~~~~~~-~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe 187 (218)
T 1yal_A 148 VFD-------------------------------------GPCGTK-LDHAVTAVGYGTS--DGKNYIIIKNSWGPNWGE 187 (218)
T ss_dssp EEC-------------------------------------CSCCSC-CCEEEEEEEEEEE--TTEEEEEEECSBCTTSTB
T ss_pred eEC-------------------------------------CCCCCC-CCEEEEEEEeecc--CCccEEEEEeCCCCCccc
Confidence 998 346554 6999999999998 789999999999999999
Q ss_pred CceEEEEccC----CccccCcceEEEee
Q psy8713 283 NGLFKILRGK----DECGIESSITAGVP 306 (309)
Q Consensus 283 ~Gy~~i~~g~----n~cgi~~~~~~~~~ 306 (309)
+|||||+|+. |.|||++.+++++.
T Consensus 188 ~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 188 KGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp TTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred CcEEEEECCCCCCCCccccccceeeEEE
Confidence 9999999985 89999999888763
No 29
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=1e-42 Score=310.35 Aligned_cols=171 Identities=25% Similarity=0.489 Sum_probs=129.9
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCC-------CCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH-------HVNG------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~-------~~~g------- 129 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|.. +...
T Consensus 1 lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~ 76 (215)
T 1iwd_A 1 LPSFVDWRSK----GAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYII 76 (215)
T ss_dssp CCSCEEGGGG----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHH
Confidence 7999999999 8999999999999999 345565555542 2100
Q ss_pred C-CCCCCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEeccc-ccccCCCceEe
Q psy8713 130 T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFD-DLILYKSGRFF 205 (309)
Q Consensus 130 ~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~-~f~~Y~sGiy~ 205 (309)
. .+.+.+..+|+......|..... ..+.+..| .++. ++++||++|.+ |||+++|.+++ +|+.|++|||.
T Consensus 77 ~~~Gi~~e~~yPY~~~~~~C~~~~~------~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~ 149 (215)
T 1iwd_A 77 TNGGIDTQQNYPYSAVQGSCKPYRL------RVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFT 149 (215)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCTTCC------CCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEEC
T ss_pred HhCCcccccccCccCCCCCCCCCCC------ceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceEC
Confidence 0 12333444555444445543211 22333344 4544 67889999875 99999999986 79999999998
Q ss_pred CCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCce
Q psy8713 206 VPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGL 285 (309)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy 285 (309)
..|+. .++|||+|||||++ ++++|||||||||++|||+||
T Consensus 150 -------------------------------------~~c~~-~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~Gy 189 (215)
T 1iwd_A 150 -------------------------------------GPCGT-AQNHGVVIVGYGTQ--SGKNYWIVRNSWGQNWGNQGY 189 (215)
T ss_dssp -------------------------------------CCCCC-CCCEEEEEEEEEEE--TTEEEEEEECSBCTTSTBTTE
T ss_pred -------------------------------------CCCCC-cCCEEEEEEEEecc--CCccEEEEEeCCCCCcCCCcE
Confidence 34654 46999999999998 889999999999999999999
Q ss_pred EEEEccC----CccccCcceEEEe
Q psy8713 286 FKILRGK----DECGIESSITAGV 305 (309)
Q Consensus 286 ~~i~~g~----n~cgi~~~~~~~~ 305 (309)
|||+|+. |.|||++.+++++
T Consensus 190 ~~i~~~~~~~~~~Cgi~~~~~~p~ 213 (215)
T 1iwd_A 190 IWMERNVASSAGLCGIAQLPSYPT 213 (215)
T ss_dssp EEEECSCSSTTCGGGTTSSCEEEE
T ss_pred EEEEcCCCCCCCCCCccccceeee
Confidence 9999987 8999999988765
No 30
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=2.8e-42 Score=312.51 Aligned_cols=176 Identities=27% Similarity=0.533 Sum_probs=131.4
Q ss_pred CCCCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCC-------CCCCC----
Q psy8713 81 DEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE-------HHVNG---- 129 (309)
Q Consensus 81 ~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~-------~~~~g---- 129 (309)
..+||++||||++ ++|+||||||.||||| ..|++++.+|. ++...
T Consensus 15 ~~~lP~~~DwR~~----~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~ 90 (241)
T 2oul_A 15 ENFDHAAYDWRLH----SGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFE 90 (241)
T ss_dssp CCCCSSCEEGGGT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHH
T ss_pred cccCCCccccCcC----CCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHH
Confidence 4568999999999 8999999999999999 44555555554 32100
Q ss_pred ----CCCCCCCCCCCCcccccc-cccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecccccccCCCc
Q psy8713 130 ----TRPSCDASKGHTPKCVRE-CQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFDDLILYKSG 202 (309)
Q Consensus 130 ----~~~~C~~~~~~~~~~~~~-c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sG 202 (309)
..+.+.+..+|+...... |..... ...+.+..| .++. ++++||++| |||+++|.++++|+.|++|
T Consensus 91 yi~~~~Gi~~e~~yPY~~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~G 162 (241)
T 2oul_A 91 DMIELGGICPDGDYPYVSDAPNLCNIDRC-----TEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEG 162 (241)
T ss_dssp HHHHTTSBCBTTSSCCCTTSCCCCCTTSS-----SCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSS
T ss_pred HHHHhCCcCccccCCCcCCCCCcCCCCCC-----ccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCc
Confidence 123444444555443344 542211 122334344 5554 788999999 9999999998899999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccC--------CCCccEEEEEc
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDE--------KSKEKYWLIAN 274 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~--------~~g~~YWiikN 274 (309)
||. ..|+.. ++|||+|||||++. +.+.+||||||
T Consensus 163 iy~-------------------------------------~~c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkN 204 (241)
T 2oul_A 163 IFD-------------------------------------GECGDQ-LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKN 204 (241)
T ss_dssp BCC-------------------------------------SCBCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEEC
T ss_pred EEc-------------------------------------CcCCCC-CCEEEEEEEeccccccccccccCCCCCEEEEEe
Confidence 998 346555 79999999999872 02789999999
Q ss_pred CCCCCCCCCceEEEEccCCc----cccCcceEEEee
Q psy8713 275 SWNTDWGDNGLFKILRGKDE----CGIESSITAGVP 306 (309)
Q Consensus 275 SWG~~WG~~Gy~~i~~g~n~----cgi~~~~~~~~~ 306 (309)
|||++|||+|||||+|+.|. |||++.+++++.
T Consensus 205 SWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 205 SWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 99999999999999999877 999999988763
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=3.9e-42 Score=311.94 Aligned_cols=176 Identities=24% Similarity=0.493 Sum_probs=131.3
Q ss_pred CCCCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCC-------CCCCC----
Q psy8713 81 DEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCE-------HHVNG---- 129 (309)
Q Consensus 81 ~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~-------~~~~g---- 129 (309)
..+||++||||++ ++|+||||||.||||| ..|++++.+|. ++...
T Consensus 17 ~~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~ 92 (243)
T 3bwk_A 17 AKLDRIAYDWRLH----GGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFD 92 (243)
T ss_dssp CCCCCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHH
T ss_pred cccCCCceecCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 4569999999999 8999999999999999 44555555554 22100
Q ss_pred ----CCCCCCCCCCCCcccccc-cccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecccccccCCCc
Q psy8713 130 ----TRPSCDASKGHTPKCVRE-CQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFDDLILYKSG 202 (309)
Q Consensus 130 ----~~~~C~~~~~~~~~~~~~-c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sG 202 (309)
..+.+.+..+|+...... |..... ...+.+..| .++. ++++||++| |||+++|.++++|+.|++|
T Consensus 93 y~~~~~Gi~~e~~yPY~~~~~~~C~~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~G 164 (243)
T 3bwk_A 93 DMIDLGGLCSQDDYPYVSNLPETCNLKRC-----NERYTIKSYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGG 164 (243)
T ss_dssp HHHHTTSBCBTTTSCCCTTSCCCCCGGGC-----SSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSS
T ss_pred HHHHhCCcccccccCCcCCCCCcCCCCCC-----ccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCc
Confidence 123444444555443333 542111 122334344 5554 788999999 9999999998899999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccC--------CCCccEEEEEc
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDE--------KSKEKYWLIAN 274 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~--------~~g~~YWiikN 274 (309)
||. ..|+.. ++|||+|||||++. +.+.+||||||
T Consensus 165 iy~-------------------------------------~~c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkN 206 (243)
T 3bwk_A 165 FYD-------------------------------------GECGAA-PNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKN 206 (243)
T ss_dssp SCC-------------------------------------CCCCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEEC
T ss_pred eec-------------------------------------CCCCCc-CCeEEEEEEecCccccccccccCCCCCEEEEEe
Confidence 998 346655 79999999999872 02789999999
Q ss_pred CCCCCCCCCceEEEEccCCc----cccCcceEEEee
Q psy8713 275 SWNTDWGDNGLFKILRGKDE----CGIESSITAGVP 306 (309)
Q Consensus 275 SWG~~WG~~Gy~~i~~g~n~----cgi~~~~~~~~~ 306 (309)
|||++|||+|||||+|+.|. |||++.+++++.
T Consensus 207 SWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 207 SWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp SBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 99999999999999999877 999999988763
No 32
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=5e-42 Score=305.33 Aligned_cols=166 Identities=28% Similarity=0.542 Sum_probs=126.5
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCCCC-----
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDASK----- 138 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~~~----- 138 (309)
||++||||++ |+|+||||||.||||| ..|++++.+|... ...|.++.
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~----~~gC~GG~~~~a~ 72 (213)
T 3ioq_A 1 IPTSIDWRQK----GAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERR----SYGCRGGFPLYAL 72 (213)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT----SCTTBCCCHHHHH
T ss_pred CCCCCCcccC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCC----CCCCCCCCHHHHH
Confidence 7999999999 9999999999999999 5567777777642 23355543
Q ss_pred -------------CCCcccccccccCccccccccccceeee-eeecchHHHHHHHHHhcCCEEEEEecc-cccccCCCce
Q psy8713 139 -------------GHTPKCVRECQENYDVPYKKDLNFGAKS-YSVSSNEKSIMKEIYEHGPVEGAFTVF-DDLILYKSGR 203 (309)
Q Consensus 139 -------------~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~v~~~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sGi 203 (309)
+|+......|..... ....+.+.. +.++.++++++++++++|||+++|+++ ++|+.|++||
T Consensus 73 ~~~~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Gi 148 (213)
T 3ioq_A 73 QYVANSGIHLRQYYPYEGVQRQCRASQA----KGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGI 148 (213)
T ss_dssp HHHHHHCEEBGGGSCCCSSCCCCCGGGC----CSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHcCCCchhccCcCCCCCCCCCCcc----CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCe
Confidence 344443444532111 111222333 356666666777777889999999998 7999999999
Q ss_pred EeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCC
Q psy8713 204 FFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDN 283 (309)
Q Consensus 204 y~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~ 283 (309)
|. ..|+. .++|||+|||||+ +|||||||||++|||+
T Consensus 149 y~-------------------------------------~~~~~-~~~HaV~iVGyg~------~yWivkNSWG~~WGe~ 184 (213)
T 3ioq_A 149 FA-------------------------------------GPCGT-SIDHAVAAVGYGN------DYILIKNSWGTGWGEG 184 (213)
T ss_dssp EC-------------------------------------CSCCS-CCCEEEEEEEEET------TEEEEECSBCTTSTBT
T ss_pred Ec-------------------------------------CCCCC-ccCceEEEEecCC------CeEEEECCCCCCcccC
Confidence 98 33444 4699999999996 5999999999999999
Q ss_pred ceEEEEccC----CccccCcceEEEe
Q psy8713 284 GLFKILRGK----DECGIESSITAGV 305 (309)
Q Consensus 284 Gy~~i~~g~----n~cgi~~~~~~~~ 305 (309)
|||||+|+. |.|||++.+++++
T Consensus 185 Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 210 (213)
T 3ioq_A 185 GYIRIKRGSGNPQGACGVLSDSVFPT 210 (213)
T ss_dssp TEEEEESSCSSTTCGGGTTSCCEEEE
T ss_pred CeEEEEcCCCCCCCcccccCcceEeE
Confidence 999999987 8999999988765
No 33
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=4.3e-42 Score=309.04 Aligned_cols=176 Identities=26% Similarity=0.548 Sum_probs=130.1
Q ss_pred CCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCC--------CCCC-----
Q psy8713 83 DLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH--------HVNG----- 129 (309)
Q Consensus 83 ~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~--------~~~g----- 129 (309)
+||++||||++ +.|+||||||.||||| ..|++++.+|.. +...
T Consensus 1 ~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y 76 (229)
T 1s4v_A 1 TVPASVDWRKK----GAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEF 76 (229)
T ss_dssp CCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHH
T ss_pred CCCCCEeCCCC----CCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHH
Confidence 48999999999 8999999999999999 345555555542 2100
Q ss_pred --C-CCCCCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEec-ccccccCCCce
Q psy8713 130 --T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTV-FDDLILYKSGR 203 (309)
Q Consensus 130 --~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~-~~~f~~Y~sGi 203 (309)
. .+.+.+..+|+......|..... ....+.+..| .++. +++.||++|.+ |||+++|.+ .++|+.|++||
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gi 151 (229)
T 1s4v_A 77 IKQRGGITTEANYPYEAYDGTCDVSKE----NAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGV 151 (229)
T ss_dssp HHHHTCBCBTTTSCCCSSCCCCCHHHH----TCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSE
T ss_pred HHHhCCccccccCCccCCCCCCCCCCC----CCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcE
Confidence 0 12334444555544455542110 1122333334 4554 67788888875 999999999 57899999999
Q ss_pred EeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCC
Q psy8713 204 FFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDN 283 (309)
Q Consensus 204 y~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~ 283 (309)
|. ..|+.. .+|||+|||||++. ++++|||||||||++|||+
T Consensus 152 y~-------------------------------------~~c~~~-~~HaV~iVGyg~~~-~g~~yWivkNSWG~~WGe~ 192 (229)
T 1s4v_A 152 FT-------------------------------------GSCGTE-LDHGVAIVGYGTTI-DGTKYWTVKNSWGPEWGEK 192 (229)
T ss_dssp EC-------------------------------------CCCCCC-CCEEEEEEEEEECT-TSCEEEEEECSBCTTSTBT
T ss_pred EC-------------------------------------CCCCCC-CCeEEEEEEecccc-CCCCEEEEEeCCCCCccCC
Confidence 98 346554 59999999999882 3899999999999999999
Q ss_pred ceEEEEccC----CccccCcceEEEee
Q psy8713 284 GLFKILRGK----DECGIESSITAGVP 306 (309)
Q Consensus 284 Gy~~i~~g~----n~cgi~~~~~~~~~ 306 (309)
|||||+|+. |.|||++.+++++.
T Consensus 193 Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 193 GYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp TEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred cEEEEEcCCCCCCCcCcccccceeeEe
Confidence 999999985 89999999888764
No 34
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.1e-41 Score=302.88 Aligned_cols=169 Identities=31% Similarity=0.567 Sum_probs=125.7
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCC---CCC-----------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHH---VNG----------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~---~~g----------- 129 (309)
||++||||++ +.|+||||||.||||| ..|++++.+|... ..|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~ 76 (212)
T 2cio_A 1 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVA 76 (212)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHH
T ss_pred CCCcccCCCC----CCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 7999999999 8999999999999999 4455655556421 001
Q ss_pred CCCCCCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEeccc-ccccCCCceEeC
Q psy8713 130 TRPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFD-DLILYKSGRFFV 206 (309)
Q Consensus 130 ~~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~-~f~~Y~sGiy~~ 206 (309)
..+.+.+..+|+......|..... ....+.+..| .++. ++++||++|.+ |||+++|.++. +|+.|++|||.
T Consensus 77 ~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~- 150 (212)
T 2cio_A 77 QYGIHYRNTYPYEGVQRYCRSREK----GPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFV- 150 (212)
T ss_dssp HTCBCBTTTSCCCSSCCCCCTTTT----CSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEEC-
T ss_pred HhCcCcccccCCcCCCCCcCCCCC----CCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceec-
Confidence 112333334555444445543211 1122333334 4554 78889999875 99999999975 89999999998
Q ss_pred CCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceE
Q psy8713 207 PGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLF 286 (309)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~ 286 (309)
..|+. .++|||+|||||+ +|||||||||++|||+|||
T Consensus 151 ------------------------------------~~~~~-~~~HaV~iVGyg~------~yWivkNSWG~~WGe~Gy~ 187 (212)
T 2cio_A 151 ------------------------------------GPCGN-KVDHAVAAVGYGP------NYILIKNSWGTGWGENGYI 187 (212)
T ss_dssp ------------------------------------CCCCS-CCCEEEEEEEEET------TEEEEECSBCTTSTBTTEE
T ss_pred ------------------------------------CCCCC-CCCEEEEEEEecC------CeEEEEeCCCCCcccCcEE
Confidence 34655 3699999999997 5999999999999999999
Q ss_pred EEEccC----CccccCcceEEEe
Q psy8713 287 KILRGK----DECGIESSITAGV 305 (309)
Q Consensus 287 ~i~~g~----n~cgi~~~~~~~~ 305 (309)
||+|+. |.|||++.+++++
T Consensus 188 ~i~~~~~~~~~~Cgi~~~~~~p~ 210 (212)
T 2cio_A 188 RIKRGTGNSYGVCGLYTSSFYPV 210 (212)
T ss_dssp EEECSSSCTTCGGGTTSCCEEEE
T ss_pred EEEcCCCCCCCccCcccceeEEE
Confidence 999986 8999999988765
No 35
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=1.1e-41 Score=302.30 Aligned_cols=166 Identities=27% Similarity=0.503 Sum_probs=125.1
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCC-------CCCC-------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH-------HVNG------- 129 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~-------~~~g------- 129 (309)
||++||||++ ++|+||||||.||||| ..|++++.+|.. +...
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~ 76 (208)
T 1o0e_A 1 LPEQIDWRKK----GAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYII 76 (208)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHH
Confidence 7999999999 8999999999999999 445565555642 2100
Q ss_pred C-CCCCCCCCCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEeccc-ccccCCCceEe
Q psy8713 130 T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVFD-DLILYKSGRFF 205 (309)
Q Consensus 130 ~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~~-~f~~Y~sGiy~ 205 (309)
. .+.+.+..+|+......|.. ....+.+..| .++. ++++||++|++ |||+++|.+++ +|+.|++|||.
T Consensus 77 ~~~Gi~~e~~yPY~~~~~~C~~-------~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~ 148 (208)
T 1o0e_A 77 NNGGIDTQANYPYKAVQGPCQA-------ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFS 148 (208)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCC-------CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEEC
T ss_pred HhCCcCcccccCccCCCCcCCC-------CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceEC
Confidence 0 12333334455444445542 1122333333 4554 78889998875 99999999975 89999999998
Q ss_pred CCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCce
Q psy8713 206 VPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGL 285 (309)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy 285 (309)
..|+. ..+|||+|||||+ +|||||||||++|||+||
T Consensus 149 -------------------------------------~~c~~-~~~HaV~iVGyg~------~yWivkNSWG~~WGe~Gy 184 (208)
T 1o0e_A 149 -------------------------------------GPCGT-KLNHGVTIVGYQA------NYWIVRNSWGRYWGEKGY 184 (208)
T ss_dssp -------------------------------------CCCCS-CCCEEEEEEEECS------SEEEEECSBCTTSTBTTE
T ss_pred -------------------------------------CCCCC-cCCEEEEEEEeCC------CeEEEEcCCCCcccCCcE
Confidence 34655 3699999999997 599999999999999999
Q ss_pred EEEEccC--CccccCcceEEEe
Q psy8713 286 FKILRGK--DECGIESSITAGV 305 (309)
Q Consensus 286 ~~i~~g~--n~cgi~~~~~~~~ 305 (309)
|||+|+. |.|||++.+++++
T Consensus 185 ~~i~~~~~~~~Cgi~~~~~~p~ 206 (208)
T 1o0e_A 185 IRMLRVGGCGLCGIARLPYYPT 206 (208)
T ss_dssp EEEECCSTTCGGGTTSSCEEEE
T ss_pred EEEEcCCCCCcCCCcccceeee
Confidence 9999997 8999999988765
No 36
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.9e-41 Score=301.86 Aligned_cols=166 Identities=28% Similarity=0.566 Sum_probs=126.4
Q ss_pred CCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCCCCCCCCCCCCCC------
Q psy8713 84 LPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEHHVNGTRPSCDAS------ 137 (309)
Q Consensus 84 lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~~~~g~~~~C~~~------ 137 (309)
||++||||++ +.|+||||||.||||| ..|++++.+|... ...|.++
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~----~~gC~GG~~~~a~ 72 (214)
T 2bdz_A 1 YPESIDWREK----GAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERR----SHGCDGGYQTTSL 72 (214)
T ss_dssp CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTT----SCTTBCCCHHHHH
T ss_pred CCCcEeCCCC----CCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCC----CCCCCCCCHHHHH
Confidence 7999999999 8999999999999999 4566666666531 1234443
Q ss_pred ------------CCCCcccccccccCccccccccccceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCCc
Q psy8713 138 ------------KGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKSG 202 (309)
Q Consensus 138 ------------~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~sG 202 (309)
.+|+......|..... ....+.+..| .++. ++++||++|++ |||+++|.++ ++|+.|++|
T Consensus 73 ~y~~~~Gi~~e~~yPY~~~~~~C~~~~~----~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~G 147 (214)
T 2bdz_A 73 QYVVDNGVHTEREYPYEKKQGRCRAKDK----KGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGG 147 (214)
T ss_dssp HHHHHHCEEBTTTSCCCSSCCCCCTTTC----CSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSS
T ss_pred HHHHHhCCCccccCCCCCCCCCCCCCCC----CCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCc
Confidence 3454443344542211 0112333334 4543 78899999986 9999999998 789999999
Q ss_pred eEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCC
Q psy8713 203 RFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGD 282 (309)
Q Consensus 203 iy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~ 282 (309)
||. ..|+. .++|||+|||||+ +|||||||||++|||
T Consensus 148 iy~-------------------------------------~~~~~-~~~HaV~iVGyg~------~yWivkNSWG~~WGe 183 (214)
T 2bdz_A 148 IYE-------------------------------------GPCGT-NTDHAVTAVGYGK------TYLLLKNSWGPNWGE 183 (214)
T ss_dssp EEC-------------------------------------CSCCS-CCCEEEEEEEECS------SEEEEECSBCTTSTB
T ss_pred eec-------------------------------------CCCCC-CCCeEEEEEEcCC------CeEEEEeCCCCCccc
Confidence 998 34655 4699999999997 599999999999999
Q ss_pred CceEEEEccC----CccccCcceEEEee
Q psy8713 283 NGLFKILRGK----DECGIESSITAGVP 306 (309)
Q Consensus 283 ~Gy~~i~~g~----n~cgi~~~~~~~~~ 306 (309)
+|||||+|+. |.|||++.+++++.
T Consensus 184 ~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 184 KGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp TTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred CCEEEEEcCCCCCCCcccccccceEEEe
Confidence 9999999986 89999999887764
No 37
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=5.5e-42 Score=306.91 Aligned_cols=176 Identities=25% Similarity=0.508 Sum_probs=131.3
Q ss_pred CCCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCC---------CCCC---
Q psy8713 82 EDLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH---------HVNG--- 129 (309)
Q Consensus 82 ~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~---------~~~g--- 129 (309)
.+||++||||++ ++|+||||||.||||| ..|++++.+|.. +...
T Consensus 5 ~~lP~~~Dwr~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~ 80 (224)
T 3f75_A 5 SELPAGVDWRSR----GCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAF 80 (224)
T ss_dssp GGSCSCEEHHHH----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHH
T ss_pred cCCCCceecccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHH
Confidence 468999999999 8999999999999999 345555555543 2100
Q ss_pred ----C-CCCCCCCCCCCcccccccccCccccccccccceeeee-eec-chHHHHHHHHHhcCCEEEEEeccc-ccccCCC
Q psy8713 130 ----T-RPSCDASKGHTPKCVRECQENYDVPYKKDLNFGAKSY-SVS-SNEKSIMKEIYEHGPVEGAFTVFD-DLILYKS 201 (309)
Q Consensus 130 ----~-~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~v~-~~~~~ik~~l~~~GPv~v~~~~~~-~f~~Y~s 201 (309)
. .+.+.+..+|+......|...... ..+.+..| .++ .++++||++|. +|||+++|.+.. +|+.|++
T Consensus 81 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~-----~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~ 154 (224)
T 3f75_A 81 QYVLDSGGICSEDAYPYLARDEECRAQSCE-----KVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHE 154 (224)
T ss_dssp HHHHHHTCBCBTTTSCCCSSCCCCCGGGSC-----CCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEE
T ss_pred HHHHHhCCccccccCCCcCCCCCCCcCCCC-----ceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCcc
Confidence 1 233444445655444455422111 11222233 444 37889999998 999999999975 8999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWG 281 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG 281 (309)
|||. ..|+ ..++|||+|||||++..++++|||||||||++||
T Consensus 155 Giy~-------------------------------------~~~~-~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG 196 (224)
T 3f75_A 155 GVFD-------------------------------------ASCG-TDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWG 196 (224)
T ss_dssp EEEC-------------------------------------CCCC-CCCCEEEEEEEEEEETTTTEEEEEEECSBCTTST
T ss_pred ceEC-------------------------------------CCCC-CccCeEEEEEEEecccCCCCCEEEEECCcCcchh
Confidence 9998 3354 3569999999999875468899999999999999
Q ss_pred CCceEEEEccC---CccccCcceEEEe
Q psy8713 282 DNGLFKILRGK---DECGIESSITAGV 305 (309)
Q Consensus 282 ~~Gy~~i~~g~---n~cgi~~~~~~~~ 305 (309)
|+|||||+|+. |.|||++.+++++
T Consensus 197 ~~Gy~~i~~~~~~~~~cgi~~~~~~p~ 223 (224)
T 3f75_A 197 RDGYMYMAMHKGEEGQCGLLLDASFPV 223 (224)
T ss_dssp BTTEEEEESCSCTTCGGGTTSSCEEEE
T ss_pred hCCEEEEEcCCCCCCcCcccCceeeee
Confidence 99999999998 9999999988764
No 38
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=8e-42 Score=312.96 Aligned_cols=179 Identities=23% Similarity=0.514 Sum_probs=130.2
Q ss_pred CCCCCceecCCCCCCCCCCccccCccCCCCCc--------------------CCCccccCCCCC--------CCCC----
Q psy8713 82 EDLPANFDSRTKWPNCPTIREIRDQGSCGSCW--------------------GCRPYEIAPCEH--------HVNG---- 129 (309)
Q Consensus 82 ~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW--------------------~cs~~~~~~C~~--------~~~g---- 129 (309)
.+||++||||++ ++|+||||||.||||| ..|++++.+|.. +...
T Consensus 2 ~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~ 77 (262)
T 2fo5_A 2 SDLPPSVDWRQK----GAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFE 77 (262)
T ss_dssp -CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHH
T ss_pred CCCCCcccCCCC----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHH
Confidence 358999999999 8999999999999999 445566556643 2100
Q ss_pred ---CC-CCCCCCCCCCcccccccccCccccccccc-cceeeee-eecc-hHHHHHHHHHhcCCEEEEEecc-cccccCCC
Q psy8713 130 ---TR-PSCDASKGHTPKCVRECQENYDVPYKKDL-NFGAKSY-SVSS-NEKSIMKEIYEHGPVEGAFTVF-DDLILYKS 201 (309)
Q Consensus 130 ---~~-~~C~~~~~~~~~~~~~c~~~~~~~~~~~~-~~~~~~~-~v~~-~~~~ik~~l~~~GPv~v~~~~~-~~f~~Y~s 201 (309)
.. +.+.+..+|+......|..... +.... .+.+..| .++. ++++||++|++ |||+++|.++ ++|+.|++
T Consensus 78 yi~~~~Gi~~e~~yPY~~~~~~C~~~~~--~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~s 154 (262)
T 2fo5_A 78 YIKNNGGLITEAAYPYRAARGTCNVARA--AQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSE 154 (262)
T ss_dssp HHHHTTCEEBTTTSCCCSSCCCCCHHHH--HHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCS
T ss_pred HHHHcCCcCchhcCCCcCccCccCCccc--ccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCC
Confidence 11 2333334455444445542210 00112 2333334 4553 67889988876 9999999997 78999999
Q ss_pred ceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCC
Q psy8713 202 GRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWG 281 (309)
Q Consensus 202 Giy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG 281 (309)
|||. ..|+.. .+|||+|||||++. ++++|||||||||++||
T Consensus 155 GVy~-------------------------------------~~c~~~-~~HaV~IVGyg~~~-~G~~YWivkNSWG~~WG 195 (262)
T 2fo5_A 155 GVFT-------------------------------------GECGTE-LDHGVAVVGYGVAE-DGKAYWTVKNSWGPSWG 195 (262)
T ss_dssp SEEC-------------------------------------CCCCCC-CCEEEEEEEEEECT-TSCEEEEEECSBCTTST
T ss_pred ceEC-------------------------------------CCCCCc-CCEEEEEEEEcccC-CCceEEEEEeCCCCCCC
Confidence 9998 346654 59999999999873 48899999999999999
Q ss_pred CCceEEEEccCC----ccccCcceEEEee
Q psy8713 282 DNGLFKILRGKD----ECGIESSITAGVP 306 (309)
Q Consensus 282 ~~Gy~~i~~g~n----~cgi~~~~~~~~~ 306 (309)
|+|||||+|+.| .|||++.+++++.
T Consensus 196 e~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 196 EQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp BTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 999999999864 5999999887664
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.7e-38 Score=291.08 Aligned_cols=100 Identities=30% Similarity=0.589 Sum_probs=83.5
Q ss_pred HHHHHHHHHhcCCEEEEEecccccccCC-CceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCccCC
Q psy8713 173 EKSIMKEIYEHGPVEGAFTVFDDLILYK-SGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKALGG 251 (309)
Q Consensus 173 ~~~ik~~l~~~GPv~v~~~~~~~f~~Y~-sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (309)
+++||++|+++|||+++|.+. +|+.|+ +|+|.. ..|+...++
T Consensus 157 ~~~ik~~i~~~GPV~v~i~~~-~f~~y~~~g~~~~------------------------------------~~c~~~~~~ 199 (265)
T 2wbf_X 157 VKIIKTEVMNKGSVIAYIKAE-NVMGYEFSGKKVK------------------------------------NLCGDDTAD 199 (265)
T ss_dssp HHHHHHHHHHHSCEEEEECGG-GGCSGGGGSSSEE------------------------------------CCCCCSCCC
T ss_pred HHHHHHHHHhcCCEEEEEEcc-cccccccCCcEEc------------------------------------CCCCCCcCC
Confidence 478999999999999999984 688775 454431 236666789
Q ss_pred ceEEEEEeecc---CCCCccEEEEEcCCCCCCCCCceEEEEc-cCCccccCcceEEEeecCC
Q psy8713 252 HAIRILGWGED---EKSKEKYWLIANSWNTDWGDNGLFKILR-GKDECGIESSITAGVPKLD 309 (309)
Q Consensus 252 HaV~iVGyg~~---~~~g~~YWiikNSWG~~WG~~Gy~~i~~-g~n~cgi~~~~~~~~~~~~ 309 (309)
|||+|||||++ .+.+++|||||||||++|||+|||||+| +.|+|||++.+++++|+||
T Consensus 200 HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 200 HAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCHFNFIHSVVIFNVD 261 (265)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTTCSSCSCCEEEEECEE
T ss_pred EEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCccCcceeEEEEecccc
Confidence 99999999984 2223699999999999999999999986 5799999999999999876
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=9.6e-38 Score=290.08 Aligned_cols=202 Identities=22% Similarity=0.281 Sum_probs=129.3
Q ss_pred ccccCCCCcHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCceecCCCCCCCCCCccccCccCCCCCc--------
Q psy8713 42 EKNSLSNIPRAHLKSWMGVHPDYNLPANRLPELIGYSEVDEDLPANFDSRTKWPNCPTIREIRDQGSCGSCW-------- 113 (309)
Q Consensus 42 g~Nf~~~~~~e~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~~cg~vtpVkdQg~CGSCW-------- 113 (309)
..|++..+++|.++..||.+++. |..+............+||++||||++ + ||||||.|||||
T Consensus 17 ~~~~~~~~~~~~~~~~lG~~p~~--~d~rd~~~~~~~~~~~~lP~s~DwR~~----~---pVkdQG~CGSCWAFAa~~al 87 (291)
T 3ois_A 17 RGSHMQTVLKRRKKSGYGYIPDI--ADIRDFSYTPEKSVIAALPPKVDLTPP----F---QVYDQGRIGSCTANALAAAI 87 (291)
T ss_dssp ------CCCCCCCCTTCCEECCC--CCTTCCBCCCCHHHHHTCCSEEECCCS----S---CCCBCTTSSCHHHHHHHHHH
T ss_pred chhhHhHhhhccccccCCCCCCC--CcccccccCCCccccccCCcceecccC----C---CcccCCCCccHHHHHHHHHH
Confidence 34578888889999999998876 332221111111112479999999998 4 999999999999
Q ss_pred -----------CCCccccC--CCC-------CCCCC-----------CCCCCCCCCCCCcccc---cccccC-------c
Q psy8713 114 -----------GCRPYEIA--PCE-------HHVNG-----------TRPSCDASKGHTPKCV---RECQEN-------Y 152 (309)
Q Consensus 114 -----------~cs~~~~~--~C~-------~~~~g-----------~~~~C~~~~~~~~~~~---~~c~~~-------~ 152 (309)
..+++++. .|. +...| ..+.+.+..+|+.... ..|... .
T Consensus 88 E~~~~~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~ 167 (291)
T 3ois_A 88 QFERIHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADPRTEEFPPGAPASKK 167 (291)
T ss_dssp HHHHHHTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGSCCCCCCCCTTTCSCCTTCGGGSC
T ss_pred HHHHHHhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhCCCCCCccccccccccccccccCC
Confidence 22333222 121 11111 1233333344543321 122210 0
Q ss_pred c--ccccccccceeee-eeecchHHHHHHHHHhcCCEEEEEecccccccCCC--ceEeCCCCcchhhhhhhhhhcccCcc
Q psy8713 153 D--VPYKKDLNFGAKS-YSVSSNEKSIMKEIYEHGPVEGAFTVFDDLILYKS--GRFFVPGNETTAMSLIKWTIRDNTSQ 227 (309)
Q Consensus 153 ~--~~~~~~~~~~~~~-~~v~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~s--Giy~~~~~~~~~~~~~~~~i~~~~~~ 227 (309)
+ .-+.....+.+.. +.++.++++||++|+++|||+++|.++++|+.|++ |||..|.
T Consensus 168 p~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~------------------- 228 (291)
T 3ois_A 168 PSDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPT------------------- 228 (291)
T ss_dssp CCHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCC-------------------
T ss_pred CCHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCC-------------------
Confidence 0 0001112333333 36777899999999999999999999999999998 9998541
Q ss_pred cCcCCcceeccccccccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEcc
Q psy8713 228 LGAEGAFTVFDDLILYKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRG 291 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g 291 (309)
.++...++|||+|||||+ +++|||||||||++||++|||||+|+
T Consensus 229 ----------------~~~~~~~~Hav~iVGy~~----~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 229 ----------------KNDTLEGGHAVLCVGYDD----EIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp ----------------TTSCEEEEEEEEEEEEET----TTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ----------------CCCCCcCCeEEEEEEEeC----CCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 123445699999999984 47899999999999999999999997
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.92 E-value=1.5e-25 Score=217.70 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=68.9
Q ss_pred eecchH--HHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccC
Q psy8713 168 SVSSNE--KSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKS 245 (309)
Q Consensus 168 ~v~~~~--~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
+++.++ +.++.+|.+.|||++++++.+ +.++++|||..+.+.- -.+.+.... ...+ ...+..+
T Consensus 301 Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~--~~~fg~~~~------~m~K------aeRl~~~ 365 (453)
T 2cb5_A 301 NQPIDFLKKMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDH--ELVFGVSLK------NMNK------AERLTFG 365 (453)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCH--HHHHSCCSC------SSCH------HHHHHTT
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccc--hhhcCcccc------ccCH------HHHhhcc
Confidence 444433 456678899999999999975 4455999998432100 000000000 0000 0000112
Q ss_pred CCccCCceEEEEEee--ccCCCCc-cEEEEEcCCCCCCCCCceEEEEcc
Q psy8713 246 GKALGGHAIRILGWG--EDEKSKE-KYWLIANSWNTDWGDNGLFKILRG 291 (309)
Q Consensus 246 ~~~~~~HaV~iVGyg--~~~~~g~-~YWiikNSWG~~WG~~Gy~~i~~g 291 (309)
....+|||+||||| .+. +|+ +|||||||||++||++|||+|+++
T Consensus 366 -~s~~~HAmlivGyg~~~d~-~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 366 -ESLMTHAMTFTAVSEKDDQ-DGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp -SCCCCEEEEEEEEEECTTS-CSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred -CCCCCeEEEEEEecccccc-CCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23569999999999 642 566 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=99.91 E-value=7.4e-25 Score=213.13 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=72.5
Q ss_pred eeeecchH--HHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccc
Q psy8713 166 SYSVSSNE--KSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILY 243 (309)
Q Consensus 166 ~~~v~~~~--~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
.++++.++ +.++++|.++|||++++++.+ |++|++|||..+.+.- + . .+.+ +....... .
T Consensus 303 y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~----------~---~-fg~~--~~m~KaeR-l 364 (457)
T 2e01_A 303 YLNVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNY----------P---A-IGYN--LPQQKASR-I 364 (457)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCG----------G---G-GTCC--CCCCHHHH-H
T ss_pred EEEcCHHHHHHHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccch----------h---h-cCcc--cccCHHHh-h
Confidence 34566543 566778899999999999974 7788999996321000 0 0 0000 00000000 1
Q ss_pred cCCCccCCceEEEEEeeccCCCCc--cEEEEEcCCCCCCCCCceEEEEcc
Q psy8713 244 KSGKALGGHAIRILGWGEDEKSKE--KYWLIANSWNTDWGDNGLFKILRG 291 (309)
Q Consensus 244 ~~~~~~~~HaV~iVGyg~~~~~g~--~YWiikNSWG~~WG~~Gy~~i~~g 291 (309)
.+.....+|||+|||||.+. +|+ +|||||||||++||++|||+|+++
T Consensus 365 ~~~~s~~~HAmlivGyg~d~-~G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 365 RYHESLMTAAMLITGCHVDE-TSKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp HTTSCCCCEEEEEEEEEECT-TTCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred ccCCCCCCeEEEEEEEEecc-CCCccCEEEEEeCccCCcCCCceEEeehh
Confidence 12334569999999999763 566 899999999999999999999996
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.66 E-value=1.4e-17 Score=158.73 Aligned_cols=123 Identities=16% Similarity=0.244 Sum_probs=71.1
Q ss_pred eeeecch--HHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhh-----cccCc---ccCcCCcce
Q psy8713 166 SYSVSSN--EKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTI-----RDNTS---QLGAEGAFT 235 (309)
Q Consensus 166 ~~~v~~~--~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i-----~~~~~---~~~~~~~~~ 235 (309)
.+++|-+ .+.+.++|.+.-||..+-+|.+.++. +.||...|... .+-.+.+..+ .++.. -..+...+.
T Consensus 222 ~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~-~~Gi~~~~~~~-~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~ 299 (383)
T 3pw3_A 222 SYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT-RDGVAVMPDDE-KVQELSGSDMAHWLKLKPEEKKLNTKPQPQKW 299 (383)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC-TTSEECCBCHH-HHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCC
T ss_pred cCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC-CCceeeCcchh-hHHHhcCcchhhhccCCHHHhhhccCCCcccC
Confidence 4677642 23344466667799999999875555 88998643210 0111111100 00000 000011111
Q ss_pred ecccccc--ccCCCccCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEcc
Q psy8713 236 VFDDLIL--YKSGKALGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRG 291 (309)
Q Consensus 236 ~~~~~~~--~~~~~~~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g 291 (309)
+.....+ ........+|||+|||||.+. +|++|||||||||++||++|||+|++.
T Consensus 300 ~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~-~g~~yw~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 300 CTQAERQLAYDNYETTDDHGMQIYGIAKDQ-EGNEYYMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CCHHHHHHHHHTTSSCCEEEEEEEEEEECT-TCCEEEEEECSBCSCSTTTTEEEEEHH
T ss_pred CCHHHHHHHhhhccCcCCeEEEEEEEEEcC-CCceEEEEEeCCCCCCCcCCeEEecHH
Confidence 1111100 112234569999999999753 678999999999999999999999874
No 44
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=97.65 E-value=3.8e-05 Score=57.03 Aligned_cols=46 Identities=7% Similarity=-0.093 Sum_probs=36.9
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHHhCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSWMGVHP 62 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~lg~~~ 62 (309)
++....++|.+||...+.+-.+|++|+|+|+|++.|||+.++|.++
T Consensus 32 iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf~~~~g~~~ 77 (80)
T 2l95_A 32 IYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHHHHHhCCCC
Confidence 5678889999999876555579999999999999888855777543
No 45
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=97.08 E-value=0.0003 Score=55.07 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=33.7
Q ss_pred cchHHHHHHHHhccccCCCCCCcccccccCCCCcHHHHHHH-hCCCCCC
Q psy8713 17 FPGMAWRYWVKSGIVSGGAYGSKQAEKNSLSNIPRAHLKSW-MGVHPDY 64 (309)
Q Consensus 17 ~~~~a~~~~~~~~~~~~~~~~s~~~g~Nf~~~~~~e~~~~~-lg~~~~~ 64 (309)
++..+.++|.+||.. + .+|++|+|.|+|++.|||+++ +|.+...
T Consensus 48 iF~~Nl~~I~~hN~~---~-~sy~lglN~FaDLT~eEF~~~~lg~~~~~ 92 (106)
T 3f75_P 48 IFKNNLVYIHTHNQQ---G-YSYSLKMNHFGDLSRDEFRRKYLGFKKSR 92 (106)
T ss_dssp HHHHHHHHHHHHHTS---C-CSEEECCCTTTTCCHHHHHHHSCCBCC--
T ss_pred HHHHHHHHHHHHHhc---C-CCeeeCCcccccCCHHHHHHHHcCCCCCc
Confidence 467788899999976 3 699999999999999888764 5655443
No 46
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=96.75 E-value=0.00013 Score=69.45 Aligned_cols=14 Identities=36% Similarity=1.170 Sum_probs=13.7
Q ss_pred CccccCccCCCCCc
Q psy8713 100 IREIRDQGSCGSCW 113 (309)
Q Consensus 100 vtpVkdQg~CGSCW 113 (309)
++||||||+|||||
T Consensus 22 vtpVknQg~cGsCW 35 (383)
T 3pw3_A 22 ITSVKNQNRAGTCW 35 (383)
T ss_dssp CCCCCBCCBSSCHH
T ss_pred CCCcccCCCCcHHH
Confidence 89999999999999
No 47
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=93.52 E-value=0.032 Score=51.62 Aligned_cols=31 Identities=58% Similarity=1.480 Sum_probs=28.4
Q ss_pred ccCCCCCCCcchHHHHHHHHhccccCCCCCC
Q psy8713 8 LCGFGCNGGFPGMAWRYWVKSGIVSGGAYGS 38 (309)
Q Consensus 8 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~s 38 (309)
.|++||+||++..||+|+.++||+++..|.+
T Consensus 129 ~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~ 159 (317)
T 3pbh_A 129 MCGDGCNGGYPAEAWNFWTRKGLVSGGLYES 159 (317)
T ss_dssp TTBCGGGCBCHHHHHHHHHHTCEEBBCSTTC
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCCcchhccC
Confidence 4689999999999999999999999999854
No 48
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=91.29 E-value=0.077 Score=47.22 Aligned_cols=30 Identities=57% Similarity=1.352 Sum_probs=27.5
Q ss_pred cCCCCCCCcchHHHHHHHHhccccCCCCCC
Q psy8713 9 CGFGCNGGFPGMAWRYWVKSGIVSGGAYGS 38 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~s 38 (309)
++.||+||.+..||+|+.++||+++..|.+
T Consensus 68 ~~~GC~GG~~~~a~~yi~~~Gi~~e~~y~~ 97 (254)
T 3qsd_A 68 CGLGCEGGILGPAWDYWVKEGIVTGSSKEN 97 (254)
T ss_dssp SBCTTBCBCHHHHHHHHHHTCBCBCCCTTT
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCccccccc
Confidence 578999999999999999999999999853
No 49
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=90.71 E-value=0.1 Score=46.76 Aligned_cols=30 Identities=60% Similarity=1.499 Sum_probs=27.3
Q ss_pred cCCCCCCCcchHHHHHHHHhccccCCCCCC
Q psy8713 9 CGFGCNGGFPGMAWRYWVKSGIVSGGAYGS 38 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~s 38 (309)
++.||+||.+..||+|+.++|++++..|++
T Consensus 73 ~~~gC~GG~~~~a~~y~~~~Gi~~~~~Y~~ 102 (266)
T 3cbj_A 73 CGDGCNGGYPAEAWNFWTRKGLVSGGLYES 102 (266)
T ss_dssp GBCTTBCBCHHHHHHHHHHTCBCBCCSTTC
T ss_pred CCCCCCCCCHHHHHHHHHHhCcCcCccccc
Confidence 578999999999999999999999888854
No 50
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=90.52 E-value=0.13 Score=47.60 Aligned_cols=32 Identities=44% Similarity=0.856 Sum_probs=28.2
Q ss_pred ccCCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 8 LCGFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 8 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
.|+.||+||++..||+|+.++||+++..| .|+
T Consensus 135 ~~~~GC~GG~~~~A~~yi~~~Gi~~e~~y-PY~ 166 (325)
T 3hhi_A 135 DCGDGCNGGDPDRAWAYFSSTGLVSDYCQ-PYP 166 (325)
T ss_dssp GGBCTTBCBCHHHHHHHHHHTCBCBTTTS-CCS
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCCccccc-CCc
Confidence 36799999999999999999999998886 554
No 51
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=88.68 E-value=0.18 Score=43.51 Aligned_cols=36 Identities=33% Similarity=0.696 Sum_probs=29.7
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..||+|+.++|++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 89 (212)
T 2cio_A 51 QELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTY-PYE 89 (212)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHHHHhCcCccccc-CCc
Confidence 455445 689999999999999999999999887 443
No 52
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=87.70 E-value=0.19 Score=46.37 Aligned_cols=36 Identities=36% Similarity=0.746 Sum_probs=30.1
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.| +.||+||.+..||+|+.++||+++..| .|+
T Consensus 157 q~lvdC~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 195 (322)
T 1pci_A 157 QELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKY-PYK 195 (322)
T ss_dssp HHHHHSCTTSCGGGCBCHHHHHHHHHHHCBCBTTTS-CCC
T ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHhCCCchhhC-CCC
Confidence 555555 689999999999999999999999887 443
No 53
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=87.69 E-value=0.18 Score=43.83 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=29.9
Q ss_pred cccccc--CCCCCCCcchHHHHHHHHhccccCCCCCCc
Q psy8713 4 QQIRLC--GFGCNGGFPGMAWRYWVKSGIVSGGAYGSK 39 (309)
Q Consensus 4 ~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~ 39 (309)
||+-.| ..||+||.+..|++|+.++|++++..| .|
T Consensus 60 q~l~dc~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y-PY 96 (222)
T 3f5v_A 60 QELVDCASQHGCHGDTIPRGIEYIQHNGVVQESYY-RY 96 (222)
T ss_dssp HHHHHHTCSSTTBCCCHHHHHHHHHHHCEEBGGGS-CC
T ss_pred HHHHhCcCCCCCCCCCHHHHHHHHHHcCCCchhhC-CC
Confidence 455555 689999999999999999999999988 44
No 54
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=87.66 E-value=0.22 Score=43.04 Aligned_cols=36 Identities=28% Similarity=0.709 Sum_probs=30.1
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++|++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~y~~~~Gi~~e~~y-PY~ 89 (214)
T 2bdz_A 51 QELLDCERRSHGCDGGYQTTSLQYVVDNGVHTEREY-PYE 89 (214)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHHCEEBTTTS-CCC
T ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHhCCCccccC-CCC
Confidence 455445 579999999999999999999999988 453
No 55
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=87.25 E-value=0.26 Score=42.70 Aligned_cols=36 Identities=36% Similarity=0.746 Sum_probs=29.7
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++|++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 89 (216)
T 1ppo_A 51 QELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKY-PYK 89 (216)
T ss_dssp HHHHHHCSSSCTTBCCCHHHHHHHHHHHCBCBTTTS-CCC
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHhCcCccccC-Ccc
Confidence 455445 689999999999999999999999887 443
No 56
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=86.62 E-value=0.29 Score=42.11 Aligned_cols=36 Identities=31% Similarity=0.633 Sum_probs=29.5
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++ |++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 90 (208)
T 1o0e_A 51 QELVDCDKKNHGCLGGAFVFAYQYIINNGGIDTQANY-PYK 90 (208)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred HHhhhhcCCCCCCCCCCHHHHHHHHHHhCCcCccccc-Ccc
Confidence 444444 6899999999999999998 99999987 443
No 57
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=86.27 E-value=0.31 Score=42.22 Aligned_cols=36 Identities=28% Similarity=0.739 Sum_probs=29.7
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++|++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y-PY~ 89 (218)
T 1yal_A 51 QELVDCDKHSYGCKGGYQTTSLQYVANNGVHTSKVY-PYQ 89 (218)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHHCBCBTTTS-CCC
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCccccc-ccc
Confidence 454444 689999999999999999999999887 443
No 58
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=86.23 E-value=0.31 Score=42.13 Aligned_cols=36 Identities=33% Similarity=0.725 Sum_probs=29.9
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++ |++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 90 (215)
T 1iwd_A 51 QELVDCDTASHGCNGGWMNNAFQYIITNGGIDTQQNY-PYS 90 (215)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred hHeEECcCCCCCCCCCCHHHHHHHHHHhCCccccccc-Ccc
Confidence 555555 5799999999999999997 99999987 443
No 59
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=86.20 E-value=0.24 Score=42.79 Aligned_cols=29 Identities=41% Similarity=0.770 Sum_probs=26.8
Q ss_pred CCCCCCCcchHHHHHHHHhccccCCCCCCc
Q psy8713 10 GFGCNGGFPGMAWRYWVKSGIVSGGAYGSK 39 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~ 39 (309)
..||+||.+..||+|+.++|++++..| .|
T Consensus 60 ~~gC~GG~~~~a~~~~~~~Gi~~e~~y-PY 88 (213)
T 3ioq_A 60 SYGCRGGFPLYALQYVANSGIHLRQYY-PY 88 (213)
T ss_dssp SCTTBCCCHHHHHHHHHHHCEEBGGGS-CC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhcc-Cc
Confidence 689999999999999999999999998 44
No 60
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=86.09 E-value=0.32 Score=41.95 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=29.1
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSK 39 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~ 39 (309)
||+-.| ..||+||.+..|++|+.++ |++++..| .|
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~~i~~~~Gi~~e~~y-PY 89 (214)
T 1m6d_A 51 QELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDY-SY 89 (214)
T ss_dssp HHHHHHCSSSCTTBCCCHHHHHHHHHHHTCBCBTTTS-CC
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHhcCcccccCc-Cc
Confidence 555555 5799999999999999997 89999887 44
No 61
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=85.69 E-value=0.33 Score=42.96 Aligned_cols=36 Identities=31% Similarity=0.583 Sum_probs=29.8
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..||+|+.++ |++++..| .|+
T Consensus 52 q~lvdC~~~~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 91 (246)
T 2b1m_A 52 QELIDCVDESEGCYNGWHYQSFEWVVKHGGIASEADY-PYK 91 (246)
T ss_dssp HHHHHHCTTSBTTTBCCHHHHHHHHHHTTCBCBTTTS-CCC
T ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHhCCcCccccc-ccc
Confidence 455444 6899999999999999997 99999987 454
No 62
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=85.25 E-value=0.36 Score=41.58 Aligned_cols=30 Identities=40% Similarity=0.650 Sum_probs=26.9
Q ss_pred CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
..||+||.+..|++|+.++ |++++..| .|+
T Consensus 60 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 90 (215)
T 3kwz_A 60 NDGCGGGYMTNAFQYVQKNRGIDSEDAY-PYV 90 (215)
T ss_dssp SCTTBCCCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCccccccC-CCc
Confidence 6899999999999999998 99999998 443
No 63
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=85.20 E-value=0.36 Score=42.50 Aligned_cols=36 Identities=33% Similarity=0.743 Sum_probs=30.2
Q ss_pred cccccc---CCCCCCCcchHHHHHHHH-hccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVK-SGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~-~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.+ +|++++..| .|+
T Consensus 68 q~l~dC~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~ 107 (241)
T 2oul_A 68 QELVDCSFKNYGCNGGLINNAFEDMIELGGICPDGDY-PYV 107 (241)
T ss_dssp HHHHHHCTTSCTTBCBCHHHHHHHHHHTTSBCBTTSS-CCC
T ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHhCCcCccccC-CCc
Confidence 555556 579999999999999998 799999987 453
No 64
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=85.16 E-value=0.38 Score=41.76 Aligned_cols=36 Identities=36% Similarity=0.721 Sum_probs=30.0
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.++ |++++..| .|+
T Consensus 53 q~l~dC~~~~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 92 (221)
T 1cqd_A 53 QQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETY-PYR 92 (221)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHHHHHHHHTSBCBTTTS-CCC
T ss_pred ceeEECCCCCCCCCCCCHHHHHHHHHHhCCccccccC-Ccc
Confidence 555556 5799999999999999997 99999887 443
No 65
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=84.67 E-value=0.34 Score=42.06 Aligned_cols=36 Identities=33% Similarity=0.508 Sum_probs=25.5
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..||+|+.++ |++++..| .|+
T Consensus 51 q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 90 (222)
T 3u8e_A 51 QQIVDCDTXXXXXXGGDADDAFRWVITNGGIASDANY-PYT 90 (222)
T ss_dssp HHHHHHCC------CCCHHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred HHHHhccCcccccCCCCHHHHHHHHHHcCCccchhcC-CCc
Confidence 444444 5799999999999999999 99999998 454
No 66
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=84.27 E-value=0.34 Score=41.91 Aligned_cols=30 Identities=33% Similarity=0.784 Sum_probs=26.8
Q ss_pred CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
..||+||.+..|++|+.++ |++++..| .|+
T Consensus 63 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 93 (220)
T 8pch_A 63 NHGCQGGLPSQAFEYIRYNKGIMGEDTY-PYK 93 (220)
T ss_dssp CCGGGCCCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHcCCcCccccc-Ccc
Confidence 5799999999999999998 99999988 443
No 67
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=84.24 E-value=0.32 Score=44.71 Aligned_cols=36 Identities=25% Similarity=0.471 Sum_probs=30.4
Q ss_pred ccccccC--CCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLCG--FGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
||+-.|- .||+||.+..||+|+.++||+++..| .|+
T Consensus 140 q~lvdC~~~~GC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 177 (312)
T 1xkg_A 140 QELVDCASQHGCHGDTIPRGIEYIQHNGVVQESYY-RYV 177 (312)
T ss_dssp HHHHHHTCSSTTBCCCHHHHHHHHHHHCEEBGGGS-CCC
T ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHcCCCccccC-Ccc
Confidence 5555663 89999999999999999999999987 553
No 68
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=84.22 E-value=0.42 Score=41.70 Aligned_cols=30 Identities=30% Similarity=0.678 Sum_probs=26.8
Q ss_pred CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
..||+||.+..|++|+.++ |++++..| .|+
T Consensus 62 ~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 92 (229)
T 1s4v_A 62 NQGCNGGLMDYAFEFIKQRGGITTEANY-PYE 92 (229)
T ss_dssp CCTTBCBCHHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCccccccC-Ccc
Confidence 5799999999999999998 99999987 454
No 69
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=84.22 E-value=0.41 Score=41.39 Aligned_cols=30 Identities=33% Similarity=0.661 Sum_probs=26.2
Q ss_pred CCCCCCCcchHHHHHHH-HhccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWV-KSGIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~-~~~~~~~~~~~s~~ 40 (309)
..||+||.+..||+|+. .+|++++..| .|+
T Consensus 62 ~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 92 (220)
T 2xu3_A 62 NEGCNGGLMDYAFQYVQDNGGLDSEESY-PYE 92 (220)
T ss_dssp CCTTBCCCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCccccccc-CCc
Confidence 57999999999999997 7899999987 453
No 70
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=84.08 E-value=0.35 Score=41.88 Aligned_cols=29 Identities=34% Similarity=0.586 Sum_probs=26.4
Q ss_pred CCCCCCCcchHHHHHHHH-hccccCCCCCCc
Q psy8713 10 GFGCNGGFPGMAWRYWVK-SGIVSGGAYGSK 39 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~-~~~~~~~~~~s~ 39 (309)
..||+||.+..|++|+.+ +|++++..| .|
T Consensus 68 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY 97 (224)
T 3f75_A 68 NQSCSGGEMNDAFQYVLDSGGICSEDAY-PY 97 (224)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCBCBTTTS-CC
T ss_pred CCCCCCCCHHHHHHHHHHhCCccccccC-CC
Confidence 689999999999999998 899999998 44
No 71
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=83.86 E-value=0.28 Score=45.02 Aligned_cols=30 Identities=27% Similarity=0.595 Sum_probs=26.9
Q ss_pred CCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
+.||+||.+..||.|+..+||+++..| .|+
T Consensus 153 ~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 182 (310)
T 2o6x_A 153 NNGCGGGLMENAYQYLKQFGLETESSY-PYT 182 (310)
T ss_dssp CCGGGCCCHHHHHHHHTTSCBCBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHCCcCchhcC-CCC
Confidence 689999999999999999999999987 443
No 72
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=83.60 E-value=0.39 Score=42.37 Aligned_cols=36 Identities=28% Similarity=0.556 Sum_probs=30.1
Q ss_pred cccccc---CCCCCCCcchHHHHHHHH-hccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVK-SGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~-~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..|++|+.+ +|++++..| .|+
T Consensus 70 q~lvdC~~~~~gC~GG~~~~a~~y~~~~~Gi~~e~~y-PY~ 109 (243)
T 3bwk_A 70 QELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQDDY-PYV 109 (243)
T ss_dssp HHHHHHCTTSCGGGCCCHHHHHHHHHHTTSBCBTTTS-CCC
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHhCCccccccc-CCc
Confidence 555556 579999999999999998 899999988 453
No 73
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=83.13 E-value=0.52 Score=40.77 Aligned_cols=30 Identities=27% Similarity=0.654 Sum_probs=26.5
Q ss_pred CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
..||+||.+..||+|+.++ |++++..| .|+
T Consensus 62 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 92 (220)
T 3p5u_A 62 TRGCDGGFMTDGFQFIINNGGINTEANY-PYT 92 (220)
T ss_dssp CCTTBCCCHHHHHHHHHHHTCBCBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCccccc-ccc
Confidence 5799999999999999997 89999988 553
No 74
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=82.81 E-value=0.41 Score=44.36 Aligned_cols=36 Identities=42% Similarity=0.800 Sum_probs=30.3
Q ss_pred cccccc---CCCCCCCcchHHHHHHHHh-ccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..||+|+.++ ||+++..| .|+
T Consensus 168 Q~LvdC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~ 207 (331)
T 3qj3_A 168 QQLVDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAY-PYE 207 (331)
T ss_dssp HHHHHHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred HHHhhhccCCCCCCCCCHHHHHHHHHHcCCcCccccc-Ccc
Confidence 555555 6899999999999999998 99999998 443
No 75
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=82.81 E-value=0.5 Score=43.78 Aligned_cols=29 Identities=38% Similarity=0.732 Sum_probs=26.4
Q ss_pred CCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 11 FGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 11 ~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
.||+||.+..||+|+.++||+++..| .|+
T Consensus 177 ~GC~GG~~~~a~~yi~~~Gi~~e~~y-PY~ 205 (329)
T 3qt4_A 177 AGCDGGWMDSAFSYIHDYGIMSESAY-PYE 205 (329)
T ss_dssp CTTBCCCHHHHHHHHHHSCBCBTTTS-CCC
T ss_pred CCCCCCChhHHHHHHHHcCCCcHHHe-eee
Confidence 59999999999999999999999998 454
No 76
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=82.76 E-value=0.4 Score=42.93 Aligned_cols=32 Identities=31% Similarity=0.633 Sum_probs=27.7
Q ss_pred cCCCCCCCcchHHHHHHHHh-ccccCCCCCCccc
Q psy8713 9 CGFGCNGGFPGMAWRYWVKS-GIVSGGAYGSKQA 41 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~s~~~ 41 (309)
+..||+||.+..||+|+.++ |++++..| .|+.
T Consensus 63 ~~~GC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~~ 95 (262)
T 2fo5_A 63 DNDGCQGGLMDNAFEYIKNNGGLITEAAY-PYRA 95 (262)
T ss_dssp SCCGGGCBCHHHHHHHHHHTTCEEBTTTS-CCCS
T ss_pred CCCCCCCCCHHHHHHHHHHcCCcCchhcC-CCcC
Confidence 36799999999999999997 99999988 4543
No 77
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=82.50 E-value=0.47 Score=43.57 Aligned_cols=36 Identities=36% Similarity=0.618 Sum_probs=29.6
Q ss_pred cccccc---CCCCCCCcchHHHHHHH-HhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMAWRYWV-KSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a~~~~~-~~~~~~~~~~~s~~ 40 (309)
||+-.| ..||+||.+..||+|+. .+||+++..| .|+
T Consensus 150 q~lvdC~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~ 189 (314)
T 1by8_A 150 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAY-PYV 189 (314)
T ss_dssp HHHHTTCTTSCGGGCCCSHHHHHHHHHTTCBCBTTTS-CCC
T ss_pred HHHHHhcCCCCCCcCCCHHHHHHHHHHcCCcCcHhhC-CCC
Confidence 555555 68999999999999999 5899999987 453
No 78
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=82.03 E-value=0.44 Score=41.11 Aligned_cols=31 Identities=23% Similarity=0.548 Sum_probs=25.4
Q ss_pred cCCCCCCCcchHHHHHHHHh---ccccCCCCCCcc
Q psy8713 9 CGFGCNGGFPGMAWRYWVKS---GIVSGGAYGSKQ 40 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~s~~ 40 (309)
+..||+||.+..||+|+.++ |+.++..| .|+
T Consensus 59 ~~~gC~GG~~~~a~~y~~~~~~gGi~~e~~y-PY~ 92 (215)
T 3i06_A 59 TDSGCSGGLMNNAFEWIVQENNGAVYTEDSY-PYA 92 (215)
T ss_dssp SSCGGGCCCHHHHHHHHHHHSTTEEEC-CCS-CCC
T ss_pred CCCCCCCCCHHHHHHHHHHhccccccccCcc-CCc
Confidence 36899999999999999997 78888887 443
No 79
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=81.23 E-value=0.47 Score=45.75 Aligned_cols=36 Identities=31% Similarity=0.679 Sum_probs=29.5
Q ss_pred cccccc---CCCCCCCcchHH-HHHHHHhccccCCCCCCcc
Q psy8713 4 QQIRLC---GFGCNGGFPGMA-WRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~a-~~~~~~~~~~~~~~~~s~~ 40 (309)
||+=.| +.||+||++..| |+|+.++||+++..| .|+
T Consensus 262 Q~LvdC~~~~~GC~GG~~~~aa~~yi~~~Gi~tE~~y-PY~ 301 (441)
T 3pdf_A 262 QEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACF-PYT 301 (441)
T ss_dssp HHHHHHCTTSCTTBCCCHHHHTTHHHHHTCBCBGGGS-CCC
T ss_pred HHHHhhccCCCCCCCCchhHHHHHHHHhcCCCcHHHe-eec
Confidence 444444 689999999987 999999999999887 664
No 80
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=80.02 E-value=0.76 Score=42.19 Aligned_cols=31 Identities=39% Similarity=0.747 Sum_probs=26.9
Q ss_pred cCCCCCCCcchHHHHHHHH-hccccCCCCCCcc
Q psy8713 9 CGFGCNGGFPGMAWRYWVK-SGIVSGGAYGSKQ 40 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~s~~ 40 (309)
++.||+||.+..||.|+.+ +||+++..| .|+
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~ 191 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASY-PYK 191 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcC-CCc
Confidence 4689999999999999995 899999987 453
No 81
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=79.81 E-value=0.58 Score=43.00 Aligned_cols=30 Identities=33% Similarity=0.661 Sum_probs=26.2
Q ss_pred CCCCCCCcchHHHHHHH-HhccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWV-KSGIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~-~~~~~~~~~~~s~~ 40 (309)
..||+||.+..||+|+. .+||+++..| .|+
T Consensus 158 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~ 188 (316)
T 1cs8_A 158 NEGCNGGLMDYAFQYVQDNGGLDSEESY-PYE 188 (316)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhcc-CCC
Confidence 48999999999999997 6899999987 453
No 82
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=79.73 E-value=3.3 Score=34.78 Aligned_cols=69 Identities=10% Similarity=0.042 Sum_probs=49.9
Q ss_pred cchHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCcc
Q psy8713 170 SSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKAL 249 (309)
Q Consensus 170 ~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (309)
..+.+++++.|-++-||.+...- ++.. .....
T Consensus 96 ~ls~neV~~~i~~Nk~I~v~~~~----------v~e~--------------------------------------~~~~~ 127 (183)
T 1pxv_A 96 VPSYNQVDQLTKDNVGIMILAQS----------VSQN--------------------------------------PNDPH 127 (183)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEC----------CCSS--------------------------------------TTSCC
T ss_pred CCCHHHHHHHHhcCCcEEEEccc----------cccC--------------------------------------CCCcc
Confidence 45778899999999999986632 1110 11123
Q ss_pred CCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCC
Q psy8713 250 GGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKD 293 (309)
Q Consensus 250 ~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n 293 (309)
.+||++||||-.- ++.+|.+|=|-|- +|++-++..++
T Consensus 128 ~gHA~av~Gya~~--~~~~~y~~WNPW~-----~~~~~~~a~S~ 164 (183)
T 1pxv_A 128 LGHALAVVGNAKI--NDQEKLIYWNPWD-----TELSIQDADSS 164 (183)
T ss_dssp CEEEEEEEEEEEE--TTEEEEEEECTTC-----SSCEEEETTCC
T ss_pred CceeEEEEeeeec--CCCeEEEEeCCcc-----CCcEeecCCCC
Confidence 5999999999987 5788999999984 37887776543
No 83
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=79.72 E-value=0.36 Score=43.53 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=29.4
Q ss_pred ccccccC--CCCCCCcchHHHHHHHHhccccCCCCCCc
Q psy8713 4 QQIRLCG--FGCNGGFPGMAWRYWVKSGIVSGGAYGSK 39 (309)
Q Consensus 4 ~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~s~ 39 (309)
||+-.|. .||+||.+..||+|+.++||+++..| .|
T Consensus 95 Q~lvdC~~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY 131 (277)
T 1deu_A 95 QNVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCN-NY 131 (277)
T ss_dssp HHHHHHSSSEETBEECHHHHHHHHHHTCBCBGGGS-CC
T ss_pred HHHHhCcCCCCCCCCCHHHHHHHHHHcCCCcCccC-CC
Confidence 5666664 69999999999999999999998776 44
No 84
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=78.80 E-value=0.86 Score=42.82 Aligned_cols=28 Identities=36% Similarity=0.720 Sum_probs=25.9
Q ss_pred cCCCCCCCcchHHHHHHHHhccccCCCC
Q psy8713 9 CGFGCNGGFPGMAWRYWVKSGIVSGGAY 36 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 36 (309)
+..||+||.+..||.|+.++||.++..|
T Consensus 210 ~~~GC~GG~~~~a~~yi~~~Gi~~e~~y 237 (363)
T 3tnx_A 210 RSYGCNGGYPWSALQLVAQYGIHYRNTY 237 (363)
T ss_dssp TSCTTBCCCHHHHHHHHHHTCBCBTTTS
T ss_pred CCCCCCCCChHHHHhHHHhcCccccccC
Confidence 3679999999999999999999999887
No 85
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=77.13 E-value=0.83 Score=39.31 Aligned_cols=30 Identities=40% Similarity=0.794 Sum_probs=26.2
Q ss_pred CCCCCCCcchHHHHHHHH-hccccCCCCCCcc
Q psy8713 10 GFGCNGGFPGMAWRYWVK-SGIVSGGAYGSKQ 40 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~-~~~~~~~~~~s~~ 40 (309)
..||+||.+..|++|+.+ +|++++..| .|+
T Consensus 64 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-PY~ 94 (218)
T 3ovx_A 64 NKGCNGGFMTTAFQYIIDNKGIDSDASY-PYK 94 (218)
T ss_dssp CCGGGCCCHHHHHHHHHHHTCEEBTTTS-CCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCccccc-Ccc
Confidence 479999999999999987 899999988 443
No 86
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=76.54 E-value=5.4 Score=37.04 Aligned_cols=69 Identities=12% Similarity=0.099 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHhcCCEEEEEecccccccCCCceEeCCCCcchhhhhhhhhhcccCcccCcCCcceeccccccccCCCcc
Q psy8713 170 SSNEKSIMKEIYEHGPVEGAFTVFDDLILYKSGRFFVPGNETTAMSLIKWTIRDNTSQLGAEGAFTVFDDLILYKSGKAL 249 (309)
Q Consensus 170 ~~~~~~ik~~l~~~GPv~v~~~~~~~f~~Y~sGiy~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (309)
..+.+++++.+-.+-||.+.+...+. ++ ....
T Consensus 272 ~ls~deVk~~id~Nk~I~v~~~~v~~-----~~-------------------------------------------n~~~ 303 (367)
T 1x9y_A 272 VPSYNQVDQLTKDNVGIMILAQSVSQ-----NP-------------------------------------------NDPH 303 (367)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEETTS-----CS-------------------------------------------SSCC
T ss_pred CCCHHHHHHHHhcCCcEEEEcccccc-----CC-------------------------------------------CCcc
Confidence 34677888999999999988754210 11 1113
Q ss_pred CCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccCC
Q psy8713 250 GGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGKD 293 (309)
Q Consensus 250 ~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~n 293 (309)
.+||++||||-.. ++.+|.++=|=|-. +++-++...+
T Consensus 304 ~gHAlavvGyA~~--~~~~~y~~WNPW~~-----~~~~~sa~S~ 340 (367)
T 1x9y_A 304 LGHALAVVGNAKI--NDQEKLIYWNPWDT-----ELSIQDADSS 340 (367)
T ss_dssp CSEEEEEEEEEEE--TTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred CceeEEEEecccc--CCCcEEEEecCccC-----CceeecCCCC
Confidence 4999999999766 57899999998843 3776666433
No 87
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=71.95 E-value=8.1 Score=33.88 Aligned_cols=26 Identities=12% Similarity=0.124 Sum_probs=20.1
Q ss_pred eeecc-hHHHHHHHHHhcCCEEEEEec
Q psy8713 167 YSVSS-NEKSIMKEIYEHGPVEGAFTV 192 (309)
Q Consensus 167 ~~v~~-~~~~ik~~l~~~GPv~v~~~~ 192 (309)
+++.. +.++|+.+|.+.-||.|-...
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~ 151 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNA 151 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEET
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeC
Confidence 34443 789999999998899987654
No 88
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=71.03 E-value=1.4 Score=39.81 Aligned_cols=31 Identities=10% Similarity=-0.036 Sum_probs=26.8
Q ss_pred cCCCCCCCcchHHHHHHHHhccccCCCCCCcc
Q psy8713 9 CGFGCNGGFPGMAWRYWVKSGIVSGGAYGSKQ 40 (309)
Q Consensus 9 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~ 40 (309)
|..+|.||.+..||+|+.++||+++..| .|+
T Consensus 117 ~~~~c~GG~~~~A~~yi~~~Gi~~e~~y-PY~ 147 (291)
T 3ois_A 117 HVNYDSGAMIRDGIKVLHKLGVCPEKEW-PYG 147 (291)
T ss_dssp CTTSCCCEEHHHHHHHHHHTCCCBGGGS-CCC
T ss_pred CCCCCCCcCHHHHHHHHHHhCCCCHhhC-CCC
Confidence 4456899999999999999999999998 554
No 89
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=70.58 E-value=11 Score=31.47 Aligned_cols=38 Identities=24% Similarity=0.465 Sum_probs=28.5
Q ss_pred cCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEccC
Q psy8713 249 LGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILRGK 292 (309)
Q Consensus 249 ~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~g~ 292 (309)
..+||++||||-.-. ++.+|.++=|=|= ++.+-++...
T Consensus 117 ~~gHAlav~Gy~~~~-ng~~~y~~WNPW~-----~~~~~~s~~s 154 (174)
T 1cv8_A 117 HAGHAMAVVGNAKLN-NGQEVIIIWNPWD-----NGFMTQDAKN 154 (174)
T ss_dssp CCEEEEEEEEEEEET-TSCEEEEEECTTC-----SSCEEEETTC
T ss_pred CCceeEEEEeeeeec-CCceEEEEeCCcc-----CCcEEecCCC
Confidence 349999999999753 6679999999984 4466655543
No 90
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=69.43 E-value=2.3 Score=37.58 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=25.8
Q ss_pred cccccc-----CCCCCCCc-chHHHHHHHHhc-cccCCCCCCcc
Q psy8713 4 QQIRLC-----GFGCNGGF-PGMAWRYWVKSG-IVSGGAYGSKQ 40 (309)
Q Consensus 4 ~~~~~~-----~~~~~~~~-~~~a~~~~~~~~-~~~~~~~~s~~ 40 (309)
||+-.| +.||+||. +..+|.|+.++| |.++..| .|+
T Consensus 60 Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~~~Ggi~~e~~y-PY~ 102 (265)
T 2wbf_X 60 LYVANCYKGEHKDRCDEGSSPMEFLQIIEDYGFLPAESNY-PYN 102 (265)
T ss_dssp HHHHHCCSSSCCCTTTCCCCHHHHHHHHHHHCCCCBTTTS-CCC
T ss_pred HHHHHhhcccCCCCCCCCCCHHHHHHHHHHcCCCCCcccc-CCc
Confidence 555555 57999995 556678888888 7777776 554
No 91
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=69.08 E-value=1.7 Score=42.09 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=26.7
Q ss_pred CCCCCCCcchHHHHHHHHhccccCCCCCCc
Q psy8713 10 GFGCNGGFPGMAWRYWVKSGIVSGGAYGSK 39 (309)
Q Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~s~ 39 (309)
..||+||.+.+|+.|+.++||++...| .|
T Consensus 141 ~~gcdGG~~~~a~~~i~kyGivpe~~y-P~ 169 (457)
T 2e01_A 141 APTEDGGQYSMFLNLVKKYGLIPKDLY-GD 169 (457)
T ss_dssp CTTCSCBCHHHHHHHHHHHCCCBGGGS-CS
T ss_pred CCCCCCCCHHHHHHHHHHcCccchhhc-CC
Confidence 479999999999999999999999998 45
No 92
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=68.47 E-value=1.6 Score=42.18 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=27.5
Q ss_pred CCCCCCcchHHHHHHHHhccccCCCCCCccc
Q psy8713 11 FGCNGGFPGMAWRYWVKSGIVSGGAYGSKQA 41 (309)
Q Consensus 11 ~~~~~~~~~~a~~~~~~~~~~~~~~~~s~~~ 41 (309)
.||+||.+.+|+.|+.++||++...| .|+.
T Consensus 139 ~gcdGG~~~~a~~~i~kyGl~p~~~y-P~~~ 168 (453)
T 2cb5_A 139 PANDGGQWDMLVNIVEKYGVIPKKCF-PESY 168 (453)
T ss_dssp TTCSCBCHHHHHHHHHHHCCCBGGGS-CCCT
T ss_pred CCCCCCChHHHHHHHHHcCccchhhc-cccc
Confidence 69999999999999999999999998 5655
No 93
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=29.62 E-value=12 Score=29.41 Aligned_cols=19 Identities=32% Similarity=0.945 Sum_probs=12.6
Q ss_pred CCCCCCcccc--CccCCCCCc
Q psy8713 95 PNCPTIREIR--DQGSCGSCW 113 (309)
Q Consensus 95 ~~cg~vtpVk--dQg~CGSCW 113 (309)
|..|.+..|. |.-+||+||
T Consensus 44 P~IGg~~~i~gwns~~CGtC~ 64 (120)
T 3m3g_A 44 PYIGGAAAVAGWNSASCGTCW 64 (120)
T ss_dssp TSEEEETTCCSTTCTTTTCEE
T ss_pred CccccccccccCCCCCCCceE
Confidence 3334444555 778899999
No 94
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=25.57 E-value=15 Score=29.03 Aligned_cols=17 Identities=29% Similarity=0.745 Sum_probs=11.6
Q ss_pred CCCcccc--CccCCCCCcC
Q psy8713 98 PTIREIR--DQGSCGSCWG 114 (309)
Q Consensus 98 g~vtpVk--dQg~CGSCW~ 114 (309)
|.+.-|. |.-+||+||.
T Consensus 47 Gg~~~i~gwns~~CGtC~~ 65 (127)
T 3suj_A 47 GGSSDIAGYNSPNCGSCYQ 65 (127)
T ss_dssp EEETTCCSTTCTTTTCEEE
T ss_pred ccccccccCCCCCCCceEE
Confidence 4344444 7889999993
No 95
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=24.39 E-value=18 Score=28.97 Aligned_cols=10 Identities=60% Similarity=1.594 Sum_probs=9.4
Q ss_pred cCccCCCCCc
Q psy8713 104 RDQGSCGSCW 113 (309)
Q Consensus 104 kdQg~CGSCW 113 (309)
-|+-+||+||
T Consensus 55 wns~~CGtCw 64 (136)
T 3sum_A 55 EAQTECGSCW 64 (136)
T ss_dssp BTTBCTTCEE
T ss_pred cCCCCCCceE
Confidence 8899999999
No 96
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=21.57 E-value=1.8e+02 Score=25.55 Aligned_cols=53 Identities=23% Similarity=0.432 Sum_probs=33.5
Q ss_pred CCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEc-cCC---------ccccCcceEEEeecCC
Q psy8713 250 GGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILR-GKD---------ECGIESSITAGVPKLD 309 (309)
Q Consensus 250 ~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~-g~n---------~cgi~~~~~~~~~~~~ 309 (309)
+.||.+|=||..+ .|+-|==.||- -.+|||.+.. ++. .-.....++..+|.|+
T Consensus 193 gGHAwViDGY~~~-----~~~H~NwGWgG--~~nGYy~l~~lnp~~~G~g~~~ggf~~~Q~~v~g~~~~~ 255 (261)
T 4d8b_A 193 GGHAFVIDGADGR-----NFYHVNWGWGG--VSDGFFRLDALNPSALGTGGGAGGFNGYQSAVVGIKPLE 255 (261)
T ss_dssp EEEEEEEEEEESS-----SCEEEECSSTT--TTCEEECTTCCCCSSCCTTCTTCCCCEEEEEEECCCBC-
T ss_pred CceEEEEcccccC-----CEEEEEcCCCC--CCCceeeccccCccccccCCCCCCcccccceeecCCccc
Confidence 5999999999854 35555433331 2599999854 332 3445566677777664
No 97
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=21.54 E-value=1.9e+02 Score=26.13 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=25.2
Q ss_pred cCCceEEEEEeeccCCCCccEEEEEcCCCCCCCCCceEEEEc
Q psy8713 249 LGGHAIRILGWGEDEKSKEKYWLIANSWNTDWGDNGLFKILR 290 (309)
Q Consensus 249 ~~~HaV~iVGyg~~~~~g~~YWiikNSWG~~WG~~Gy~~i~~ 290 (309)
.++||.+|=||..+ .||=+==.||-. .+|||.+..
T Consensus 264 ~~GHafV~DGY~~~-----~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 264 DAGHAFVIDGYNKA-----GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp CCCEEEEEEEECTT-----SCEEEECSSTTT--TCEEECCTT
T ss_pred CCceEEEEccccCC-----CeEEEecCCCCC--CCceEeccC
Confidence 46999999999864 466665555522 489999864
Done!