BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8717
(69 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156551898|ref|XP_001606777.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Nasonia vitripennis]
Length = 852
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 47/48 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLDASLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDASLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|383857261|ref|XP_003704123.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Megachile rotundata]
Length = 851
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 47/48 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLDASLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDASLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|328697671|ref|XP_003240406.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 853
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD+SLISYGPCQTPTLGFCV+RHD+IR FKPEPYW++ +T+
Sbjct: 198 FQGKYGDLDSSLISYGPCQTPTLGFCVQRHDEIRRFKPEPYWVIQVTI 245
>gi|307184245|gb|EFN70718.1| DNA topoisomerase 3-beta-1 [Camponotus floridanus]
Length = 851
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTI 245
>gi|332027377|gb|EGI67460.1| DNA topoisomerase 3-beta-1 [Acromyrmex echinatior]
Length = 848
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 195 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 242
>gi|350424370|ref|XP_003493773.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Bombus impatiens]
Length = 851
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|307203099|gb|EFN82279.1| DNA topoisomerase 3-beta-1 [Harpegnathos saltator]
Length = 851
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTI 245
>gi|340722711|ref|XP_003399746.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Bombus terrestris]
Length = 851
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|66509929|ref|XP_625165.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform 2 [Apis
mellifera]
Length = 851
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|380025214|ref|XP_003696372.1| PREDICTED: DNA topoisomerase 3-beta-1 [Apis florea]
Length = 851
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD SLISYGPCQTPTLGFCV+RHD+I+TFKP+PYW+L +T+
Sbjct: 198 FQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWVLQVTV 245
>gi|291406914|ref|XP_002719771.1| PREDICTED: topoisomerase (DNA) III beta [Oryctolagus cuniculus]
Length = 863
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N++
Sbjct: 201 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEAYWVLQAKVNVD 251
>gi|432094881|gb|ELK26289.1| DNA topoisomerase 3-beta-1 [Myotis davidii]
Length = 836
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N++
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNVD 250
>gi|357611732|gb|EHJ67631.1| putative prokaryotic DNA topoisomerase [Danaus plexippus]
Length = 848
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+QG+YGDLDASLISYGPCQTPTLGFCV+RHD I+TFKPE YW+L +T
Sbjct: 199 FQGRYGDLDASLISYGPCQTPTLGFCVQRHDDIQTFKPETYWVLRVT 245
>gi|444732291|gb|ELW72593.1| DNA topoisomerase 3-beta-1 [Tupaia chinensis]
Length = 946
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 249 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVN 297
>gi|441620017|ref|XP_004088632.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1
[Nomascus leucogenys]
Length = 803
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 156 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 206
>gi|335301482|ref|XP_003359220.1| PREDICTED: DNA topoisomerase 3-beta-1 [Sus scrofa]
Length = 859
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|348585379|ref|XP_003478449.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cavia porcellus]
Length = 862
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 46/50 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N+
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNV 249
>gi|344295392|ref|XP_003419396.1| PREDICTED: DNA topoisomerase 3-beta-1 [Loxodonta africana]
Length = 862
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVN 248
>gi|119579893|gb|EAW59489.1| topoisomerase (DNA) III beta, isoform CRA_b [Homo sapiens]
Length = 516
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 64 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 114
>gi|395862158|ref|XP_003803330.1| PREDICTED: DNA topoisomerase 3-beta-1 [Otolemur garnettii]
Length = 862
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|403309311|ref|XP_003945052.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Saimiri boliviensis
boliviensis]
Length = 586
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 289 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 339
>gi|198435562|ref|XP_002121520.1| PREDICTED: similar to topoisomerase (DNA) III beta, partial [Ciona
intestinalis]
Length = 827
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 48/48 (100%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD+SLISYGPCQTPTLGFCV+RHDKI++FKPEP+W++D+++
Sbjct: 172 FQGKYGDLDSSLISYGPCQTPTLGFCVDRHDKIQSFKPEPFWMIDVSV 219
>gi|296191436|ref|XP_002743624.1| PREDICTED: DNA topoisomerase 3-beta-1 [Callithrix jacchus]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|12803239|gb|AAH02432.1| Topoisomerase (DNA) III beta [Homo sapiens]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|332859251|ref|XP_515006.3| PREDICTED: DNA topoisomerase 3-beta-1 isoform 2 [Pan troglodytes]
gi|332859253|ref|XP_003317172.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 1 [Pan troglodytes]
gi|410207778|gb|JAA01108.1| topoisomerase (DNA) III beta [Pan troglodytes]
gi|410256630|gb|JAA16282.1| topoisomerase (DNA) III beta [Pan troglodytes]
gi|410290228|gb|JAA23714.1| topoisomerase (DNA) III beta [Pan troglodytes]
gi|410350957|gb|JAA42082.1| topoisomerase (DNA) III beta [Pan troglodytes]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|4507635|ref|NP_003926.1| DNA topoisomerase 3-beta-1 [Homo sapiens]
gi|6686033|sp|O95985.1|TOP3B_HUMAN RecName: Full=DNA topoisomerase 3-beta-1; AltName: Full=DNA
topoisomerase III beta-1
gi|4768877|gb|AAD29670.1|AF125216_1 DNA topoisomerase III beta [Homo sapiens]
gi|4102879|gb|AAD01614.1| DNA topoisomerase III beta [Homo sapiens]
gi|4321652|gb|AAD15791.1| DNA topoisomerase III beta [Homo sapiens]
gi|47678723|emb|CAG30482.1| TOP3B [Homo sapiens]
gi|109451532|emb|CAK54627.1| TOP3B [synthetic construct]
gi|109452128|emb|CAK54926.1| TOP3B [synthetic construct]
gi|119579891|gb|EAW59487.1| topoisomerase (DNA) III beta, isoform CRA_a [Homo sapiens]
gi|119579892|gb|EAW59488.1| topoisomerase (DNA) III beta, isoform CRA_a [Homo sapiens]
gi|119579894|gb|EAW59490.1| topoisomerase (DNA) III beta, isoform CRA_a [Homo sapiens]
gi|119579895|gb|EAW59491.1| topoisomerase (DNA) III beta, isoform CRA_a [Homo sapiens]
gi|208965626|dbj|BAG72827.1| topoisomerase (DNA) III beta [synthetic construct]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|397472510|ref|XP_003807785.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 1 [Pan paniscus]
gi|397472512|ref|XP_003807786.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 2 [Pan paniscus]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|158255430|dbj|BAF83686.1| unnamed protein product [Homo sapiens]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|380787141|gb|AFE65446.1| DNA topoisomerase 3-beta-1 [Macaca mulatta]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|297716768|ref|XP_002834672.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 2 [Pongo abelii]
gi|297716770|ref|XP_002834673.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 3 [Pongo abelii]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|402883653|ref|XP_003905324.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 1 [Papio anubis]
gi|402883655|ref|XP_003905325.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 2 [Papio anubis]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|355570227|gb|EHH25612.1| hypothetical protein EGK_21503 [Macaca mulatta]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|388454142|ref|NP_001253336.1| DNA topoisomerase 3-beta-1 [Macaca mulatta]
gi|355784822|gb|EHH65673.1| hypothetical protein EGM_02484 [Macaca fascicularis]
gi|383412047|gb|AFH29237.1| DNA topoisomerase 3-beta-1 [Macaca mulatta]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|390351189|ref|XP_795949.3| PREDICTED: DNA topoisomerase 3-beta-1 [Strongylocentrotus
purpuratus]
Length = 954
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 6/60 (10%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN------LNGEW 67
+QGKYGDLD++LISYGPCQTPTLGFCV RHDKI++FKPEP+W++ + + LN +W
Sbjct: 293 FQGKYGDLDSTLISYGPCQTPTLGFCVNRHDKIQSFKPEPFWVIQIQVTHESGRKLNLDW 352
>gi|351706851|gb|EHB09770.1| DNA topoisomerase 3-beta-1 [Heterocephalus glaber]
Length = 862
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVN 248
>gi|426393714|ref|XP_004063158.1| PREDICTED: DNA topoisomerase 3-beta-1 [Gorilla gorilla gorilla]
Length = 653
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|148665015|gb|EDK97431.1| topoisomerase (DNA) III beta, isoform CRA_b [Mus musculus]
Length = 469
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++ + E
Sbjct: 205 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVHTDKE 257
>gi|157786738|ref|NP_001099331.1| DNA topoisomerase 3-beta-1 [Rattus norvegicus]
gi|149019716|gb|EDL77864.1| topoisomerase (DNA) III beta (predicted) [Rattus norvegicus]
Length = 862
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++ + E
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVHTDKE 252
>gi|8918930|dbj|BAA97984.1| unnamed protein product [Mus musculus]
Length = 464
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++ + E
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVHTDKE 252
>gi|148665014|gb|EDK97430.1| topoisomerase (DNA) III beta, isoform CRA_a [Mus musculus]
Length = 867
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++ + E
Sbjct: 205 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVHTDKE 257
>gi|417405013|gb|JAA49232.1| Putative dna topoisomerase iii alpha [Desmodus rotundus]
Length = 862
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHD+I++FKPE YW+L +N
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDRIQSFKPETYWVLQAKVN 248
>gi|355725619|gb|AES08614.1| topoisomerase III beta [Mustela putorius furo]
Length = 861
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNVD 250
>gi|301792373|ref|XP_002931153.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Ailuropoda melanoleuca]
Length = 862
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNVD 250
>gi|6755851|ref|NP_035754.1| DNA topoisomerase 3-beta-1 [Mus musculus]
gi|6686042|sp|Q9Z321.1|TOP3B_MOUSE RecName: Full=DNA topoisomerase 3-beta-1; AltName: Full=DNA
topoisomerase III beta-1
gi|3868800|dbj|BAA34227.1| topoisomerase III beta [Mus musculus]
gi|21594767|gb|AAH31723.1| Topoisomerase (DNA) III beta [Mus musculus]
gi|74138777|dbj|BAE27200.1| unnamed protein product [Mus musculus]
gi|74194881|dbj|BAE26026.1| unnamed protein product [Mus musculus]
gi|148665016|gb|EDK97432.1| topoisomerase (DNA) III beta, isoform CRA_c [Mus musculus]
Length = 862
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++ + E
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVHTDKE 252
>gi|47212929|emb|CAF90301.1| unnamed protein product [Tetraodon nigroviridis]
Length = 241
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 192 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWILQAKVN 240
>gi|195996011|ref|XP_002107874.1| hypothetical protein TRIADDRAFT_49643 [Trichoplax adhaerens]
gi|190588650|gb|EDV28672.1| hypothetical protein TRIADDRAFT_49643 [Trichoplax adhaerens]
Length = 841
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 45/51 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLISYGPCQTPTLGFCVERHDKI +F+PE YW +D+ + N
Sbjct: 197 FQGKYGDLDSSLISYGPCQTPTLGFCVERHDKINSFEPEKYWKIDVKVRHN 247
>gi|281337636|gb|EFB13220.1| hypothetical protein PANDA_021957 [Ailuropoda melanoleuca]
Length = 839
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N++
Sbjct: 177 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNVD 227
>gi|312375379|gb|EFR22766.1| hypothetical protein AND_14242 [Anopheles darlingi]
Length = 752
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKY DLDASLISYGPCQTPTLGFCV+RHD+I+TFKPE +W + +T+ N E
Sbjct: 198 FQGKYADLDASLISYGPCQTPTLGFCVQRHDEIQTFKPETFWYVQVTVGENPE 250
>gi|157129809|ref|XP_001655482.1| prokaryotic DNA topoisomerase [Aedes aegypti]
gi|108872077|gb|EAT36302.1| AAEL011603-PA [Aedes aegypti]
Length = 856
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKY DLDASLISYGPCQTPTLGFCV+RHD+I+TFKPE +W + +T+ N E
Sbjct: 198 FQGKYADLDASLISYGPCQTPTLGFCVQRHDEIQTFKPESFWYVQVTVGENPE 250
>gi|91081101|ref|XP_975504.1| PREDICTED: similar to prokaryotic DNA topoisomerase [Tribolium
castaneum]
gi|270005298|gb|EFA01746.1| hypothetical protein TcasGA2_TC007344 [Tribolium castaneum]
Length = 852
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/48 (75%), Positives = 45/48 (93%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QG+YGDLD+SLISYGPCQTPTLGFCV+RHD+I+TFKPE YW++ T+
Sbjct: 199 FQGRYGDLDSSLISYGPCQTPTLGFCVQRHDQIQTFKPEAYWVIKATI 246
>gi|149720154|ref|XP_001493576.1| PREDICTED: DNA topoisomerase 3-beta-1 [Equus caballus]
Length = 862
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 250
>gi|449281995|gb|EMC88926.1| DNA topoisomerase 3-beta-1 [Columba livia]
Length = 862
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N E
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKE 252
>gi|57525152|ref|NP_001006181.1| DNA topoisomerase 3-beta-1 [Gallus gallus]
gi|53132094|emb|CAG31872.1| hypothetical protein RCJMB04_12m15 [Gallus gallus]
gi|66796187|dbj|BAD99111.1| topoisomerase III beta [Gallus gallus]
Length = 862
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N E
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKE 252
>gi|326929518|ref|XP_003210910.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Meleagris gallopavo]
Length = 862
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N E
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKE 252
>gi|410977257|ref|XP_003995024.1| PREDICTED: DNA topoisomerase 3-beta-1 [Felis catus]
Length = 862
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVN 248
>gi|73995957|ref|XP_534771.2| PREDICTED: DNA topoisomerase 3-beta-1 isoform 1 [Canis lupus
familiaris]
Length = 862
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVN 248
>gi|449477313|ref|XP_002199057.2| PREDICTED: DNA topoisomerase 3-beta-1 [Taeniopygia guttata]
Length = 1002
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N E
Sbjct: 340 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKE 392
>gi|307219265|ref|NP_001182501.1| topoisomerase (DNA) III beta isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 858
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L + ++ E
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVSRGQE 252
>gi|348543167|ref|XP_003459055.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 2 [Oreochromis
niloticus]
Length = 858
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW++ +N
Sbjct: 198 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVIQTKVN 246
>gi|307133770|ref|NP_001120391.2| topoisomerase (DNA) III beta isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 845
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L + ++ E
Sbjct: 187 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVSRGQE 239
>gi|111120268|gb|ABH06319.1| topoisomerase (DNA) III beta [Bos taurus]
Length = 295
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVDVD 250
>gi|170285121|gb|AAI61096.1| LOC100145467 protein [Xenopus (Silurana) tropicalis]
Length = 482
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L + ++ E
Sbjct: 187 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVSRGQE 239
>gi|148228452|ref|NP_001082554.1| topoisomerase (DNA) III beta [Xenopus laevis]
gi|28422192|gb|AAH46848.1| MGC53016 protein [Xenopus laevis]
Length = 858
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L + ++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVS 248
>gi|193591899|ref|XP_001951574.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 854
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 44/46 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+QGKYGDLD+SLISYGPCQTPTLGFCV+RHD+IR FKPEPYW++ +
Sbjct: 198 FQGKYGDLDSSLISYGPCQTPTLGFCVQRHDEIRRFKPEPYWVIQV 243
>gi|126324756|ref|XP_001363870.1| PREDICTED: DNA topoisomerase 3-beta-1 [Monodelphis domestica]
Length = 862
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPELYWVLQAKIN 248
>gi|296478358|tpg|DAA20473.1| TPA: topoisomerase (DNA) III beta [Bos taurus]
Length = 734
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVDVD 250
>gi|440895796|gb|ELR47898.1| DNA topoisomerase 3-beta-1, partial [Bos grunniens mutus]
Length = 816
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVDVD 250
>gi|332000010|ref|NP_001193635.1| DNA topoisomerase 3-beta-1 [Bos taurus]
Length = 861
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L ++++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVDVD 250
>gi|27882184|gb|AAH43953.1| MGC53016 protein, partial [Xenopus laevis]
Length = 698
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L + ++
Sbjct: 40 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVS 88
>gi|432876346|ref|XP_004073003.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like
[Oryzias latipes]
Length = 751
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L
Sbjct: 170 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWIL 213
>gi|354481406|ref|XP_003502892.1| PREDICTED: DNA topoisomerase 3-beta-1 [Cricetulus griseus]
gi|344253468|gb|EGW09572.1| DNA topoisomerase 3-beta-1 [Cricetulus griseus]
Length = 862
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FK E YW+L ++ N E
Sbjct: 200 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKSETYWVLQAKVHNNKE 252
>gi|242006813|ref|XP_002424239.1| DNA topoisomerase 3-beta, putative [Pediculus humanus corporis]
gi|212507608|gb|EEB11501.1| DNA topoisomerase 3-beta, putative [Pediculus humanus corporis]
Length = 852
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ KYGDLDA+LISYGPCQ PTLGFCV+RHD+I+TFKPEPYW+L +++
Sbjct: 199 FHDKYGDLDAALISYGPCQIPTLGFCVQRHDEIQTFKPEPYWVLQMSV 246
>gi|431914329|gb|ELK15587.1| DNA topoisomerase 3-beta-1 [Pteropus alecto]
Length = 779
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 46/51 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 147 FQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 197
>gi|426247933|ref|XP_004017724.1| PREDICTED: DNA topoisomerase 3-beta-1 [Ovis aries]
Length = 709
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVL 243
>gi|195399043|ref|XP_002058130.1| GJ15664 [Drosophila virilis]
gi|194150554|gb|EDW66238.1| GJ15664 [Drosophila virilis]
Length = 858
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+QG+YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 198 FQGRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPETFWYLQL 243
>gi|195041892|ref|XP_001991334.1| GH12112 [Drosophila grimshawi]
gi|193901092|gb|EDV99958.1| GH12112 [Drosophila grimshawi]
Length = 862
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+QG+YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQGRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPETFWYLQL 244
>gi|327280846|ref|XP_003225162.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform 2 [Anolis
carolinensis]
Length = 851
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L
Sbjct: 189 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEMYWVL 232
>gi|327280844|ref|XP_003225161.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform 1 [Anolis
carolinensis]
Length = 862
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEMYWVL 243
>gi|348543165|ref|XP_003459054.1| PREDICTED: DNA topoisomerase 3-beta-1 isoform 1 [Oreochromis
niloticus]
Length = 856
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW++
Sbjct: 198 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVI 241
>gi|291190792|ref|NP_001167403.1| DNA topoisomerase 3-beta-1 [Salmo salar]
gi|223648214|gb|ACN10865.1| DNA topoisomerase 3-beta-1 [Salmo salar]
Length = 857
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVI 243
>gi|391327272|ref|XP_003738127.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Metaseiulus
occidentalis]
Length = 851
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 45/50 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+Q KYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L+ + L
Sbjct: 198 FQNKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPENYWVLNAQIKL 247
>gi|326667668|ref|XP_003198651.1| PREDICTED: DNA topoisomerase 3-beta-1 [Danio rerio]
Length = 861
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW++
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEAYWVV 243
>gi|291227018|ref|XP_002733487.1| PREDICTED: topoisomerase (DNA) III beta-like [Saccoglossus
kowalevskii]
Length = 3134
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 42/44 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKY DLD++LISYGPCQTPTLGFCV+RHDKI++FKPE YW+L
Sbjct: 199 FQGKYADLDSTLISYGPCQTPTLGFCVDRHDKIQSFKPETYWVL 242
>gi|260805074|ref|XP_002597412.1| hypothetical protein BRAFLDRAFT_80591 [Branchiostoma floridae]
gi|229282677|gb|EEN53424.1| hypothetical protein BRAFLDRAFT_80591 [Branchiostoma floridae]
Length = 858
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 43/44 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+SLIS+GPCQTPTLGFCV+RHD+I++FKPE YW++
Sbjct: 199 FQGKYGDLDSSLISFGPCQTPTLGFCVDRHDQIQSFKPETYWVI 242
>gi|443731127|gb|ELU16364.1| hypothetical protein CAPTEDRAFT_182010 [Capitella teleta]
Length = 856
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 45/48 (93%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD++LISYGPCQTPTLGFCV+RHD+I++FKPE +W++ + +
Sbjct: 195 FQGKYGDLDSTLISYGPCQTPTLGFCVDRHDRIQSFKPETFWVIQMQV 242
>gi|395517223|ref|XP_003762778.1| PREDICTED: DNA topoisomerase 3-beta-1 [Sarcophilus harrisii]
Length = 801
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N + E
Sbjct: 139 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPELYWVLQAKINPDKE 191
>gi|341892314|gb|EGT48249.1| hypothetical protein CAEBREN_32330 [Caenorhabditis brenneri]
Length = 1276
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L T + + + S
Sbjct: 746 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEAYWVLKTTFSCDSQTFS 801
>gi|241721971|ref|XP_002404156.1| topoisomerase I, putative [Ixodes scapularis]
gi|215505336|gb|EEC14830.1| topoisomerase I, putative [Ixodes scapularis]
Length = 857
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 45/49 (91%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+QGKYG+LD+S IS+GPCQTPTLGFCV+RHDKI++FKPE YW+L + ++
Sbjct: 200 FQGKYGNLDSSFISFGPCQTPTLGFCVDRHDKIQSFKPEAYWVLQVKVS 248
>gi|308480547|ref|XP_003102480.1| hypothetical protein CRE_04022 [Caenorhabditis remanei]
gi|308261212|gb|EFP05165.1| hypothetical protein CRE_04022 [Caenorhabditis remanei]
Length = 867
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L T + + + S
Sbjct: 201 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEAYWVLKTTFSCDSQTFS 256
>gi|341886419|gb|EGT42354.1| hypothetical protein CAEBREN_30446, partial [Caenorhabditis
brenneri]
Length = 671
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L T + + + S
Sbjct: 2 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEAYWVLKTTFSCDSQTFS 57
>gi|195133228|ref|XP_002011041.1| GI16324 [Drosophila mojavensis]
gi|193907016|gb|EDW05883.1| GI16324 [Drosophila mojavensis]
Length = 858
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+QG+YGDLD+SLISYGPCQTPTLGFCV+RHD I+ FKPE +W L L
Sbjct: 198 FQGRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQLFKPETFWYLQL 243
>gi|156393418|ref|XP_001636325.1| predicted protein [Nematostella vectensis]
gi|156223427|gb|EDO44262.1| predicted protein [Nematostella vectensis]
Length = 856
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 42/44 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+Q KYGDLD++LISYGPCQTPTLGFCVERHD+I++FKPE YW++
Sbjct: 198 FQNKYGDLDSALISYGPCQTPTLGFCVERHDQIQSFKPEAYWVI 241
>gi|324504807|gb|ADY42072.1| DNA topoisomerase 3-beta-1 [Ascaris suum]
Length = 858
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD++ IS+GPCQTPTLGFCV RHD I FKPEPYWL+ + L
Sbjct: 201 FQGKYGDLDSTCISFGPCQTPTLGFCVTRHDLITQFKPEPYWLVQVVL 248
>gi|422293447|gb|EKU20747.1| DNA topoisomerase III [Nannochloropsis gaditana CCMP526]
Length = 870
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYGDLDA+L+SYGPCQTPTLGFCV+RHD+I++F PE +W L + +G EW
Sbjct: 186 FQGKYGDLDATLVSYGPCQTPTLGFCVQRHDEIQSFSPEKFWYLAAAVAKDGANVALEW 244
>gi|410928142|ref|XP_003977460.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Takifugu rubripes]
Length = 713
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 42/44 (95%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+SLIS+GPCQTPTLGFCVERHDKI++FK E YW+L
Sbjct: 200 FQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKAETYWIL 243
>gi|170047094|ref|XP_001851071.1| DNA topoisomerase 3-beta [Culex quinquefasciatus]
gi|167869634|gb|EDS33017.1| DNA topoisomerase 3-beta [Culex quinquefasciatus]
Length = 855
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 44/53 (83%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+QGKY DLDASLISYGPCQTPTL CV+RHD+I+TFKPE +W + +T+ N E
Sbjct: 198 FQGKYADLDASLISYGPCQTPTLTLCVQRHDEIQTFKPESFWYVQVTVGENPE 250
>gi|195448334|ref|XP_002071612.1| GK10076 [Drosophila willistoni]
gi|194167697|gb|EDW82598.1| GK10076 [Drosophila willistoni]
Length = 884
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWYLQL 244
>gi|342186003|emb|CCC95488.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 838
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EWV 68
+QGKYGDLDA+++SYGPCQTPTL FCV+RHD+I FKPE YW L T N G EWV
Sbjct: 191 FQGKYGDLDANVVSYGPCQTPTLAFCVQRHDEILNFKPENYWKLVPTTNRFGAPVTFEWV 250
>gi|194762590|ref|XP_001963417.1| GF20299 [Drosophila ananassae]
gi|190629076|gb|EDV44493.1| GF20299 [Drosophila ananassae]
Length = 878
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWYLQL 244
>gi|405959918|gb|EKC25894.1| DNA topoisomerase 3-beta-1 [Crassostrea gigas]
Length = 851
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 42/43 (97%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWL 56
+QGKYGDLD++LISYGPCQTPTLG CV+RHDKI++FKPEPYWL
Sbjct: 199 FQGKYGDLDSTLISYGPCQTPTLGLCVDRHDKIQSFKPEPYWL 241
>gi|24640096|ref|NP_511059.2| topoisomerase 3beta [Drosophila melanogaster]
gi|14286175|sp|O96651.2|TOP3B_DROME RecName: Full=DNA topoisomerase 3-beta; AltName: Full=DNA
topoisomerase III beta
gi|7290697|gb|AAF46144.1| topoisomerase 3beta [Drosophila melanogaster]
gi|54650844|gb|AAV37001.1| LD10035p [Drosophila melanogaster]
gi|220950396|gb|ACL87741.1| Top3beta-PA [synthetic construct]
Length = 875
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 244
>gi|398018216|ref|XP_003862289.1| DNA topoisomerase III, putative [Leishmania donovani]
gi|322500518|emb|CBZ35595.1| DNA topoisomerase III, putative [Leishmania donovani]
Length = 867
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS+ISYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVISYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|401425068|ref|XP_003877019.1| putative DNA topoisomerase III [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493263|emb|CBZ28548.1| putative DNA topoisomerase III [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 866
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS+ISYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVISYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|260101066|gb|ACX31684.1| DNA topoisomerase III beta [Leishmania donovani]
Length = 866
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS+ISYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVISYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|146092141|ref|XP_001470217.1| putative DNA topoisomerase III [Leishmania infantum JPCM5]
gi|134085011|emb|CAM69411.1| putative DNA topoisomerase III [Leishmania infantum JPCM5]
Length = 867
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS+ISYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVISYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|157871822|ref|XP_001684460.1| putative DNA topoisomerase III [Leishmania major strain Friedlin]
gi|68127529|emb|CAJ05541.1| putative DNA topoisomerase III [Leishmania major strain Friedlin]
Length = 866
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS+ISYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVISYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|4235475|gb|AAD13219.1| topoisomerase III [Drosophila melanogaster]
Length = 875
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 244
>gi|194896190|ref|XP_001978430.1| GG17682 [Drosophila erecta]
gi|190650079|gb|EDV47357.1| GG17682 [Drosophila erecta]
Length = 878
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 244
>gi|195469926|ref|XP_002099887.1| GE16470 [Drosophila yakuba]
gi|194187411|gb|EDX00995.1| GE16470 [Drosophila yakuba]
Length = 878
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 244
>gi|313229708|emb|CBY18523.1| unnamed protein product [Oikopleura dioica]
Length = 856
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 6/60 (10%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL------NLNGEW 67
+QG+YGDLD++ ISYGPCQTPTLGFCVERHD+I FKPE +W + L + NL +W
Sbjct: 194 FQGQYGDLDSNCISYGPCQTPTLGFCVERHDQITKFKPEKFWRMSLAVQTENSGNLYADW 253
>gi|313224215|emb|CBY32300.1| unnamed protein product [Oikopleura dioica]
Length = 856
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 6/60 (10%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL------NLNGEW 67
+QG+YGDLD++ ISYGPCQTPTLGFCVERHD+I FKPE +W + L + NL +W
Sbjct: 194 FQGQYGDLDSNCISYGPCQTPTLGFCVERHDQITKFKPEKFWRMSLAVQTENSGNLYADW 253
>gi|313239950|emb|CBY32313.1| unnamed protein product [Oikopleura dioica]
Length = 856
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 6/60 (10%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL------NLNGEW 67
+QG+YGDLD++ ISYGPCQTPTLGFCVERHD+I FKPE +W + L + NL +W
Sbjct: 194 FQGQYGDLDSNCISYGPCQTPTLGFCVERHDQITKFKPEKFWRMSLAVQTENSGNLYADW 253
>gi|195164959|ref|XP_002023313.1| GL20281 [Drosophila persimilis]
gi|198468405|ref|XP_001354695.2| GA17464 [Drosophila pseudoobscura pseudoobscura]
gi|194105418|gb|EDW27461.1| GL20281 [Drosophila persimilis]
gi|198146398|gb|EAL31750.2| GA17464 [Drosophila pseudoobscura pseudoobscura]
Length = 875
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L +
Sbjct: 199 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWYLQM 244
>gi|195565409|ref|XP_002106294.1| GD16199 [Drosophila simulans]
gi|194203668|gb|EDX17244.1| GD16199 [Drosophila simulans]
Length = 821
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 145 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 190
>gi|389601917|ref|XP_001566225.2| putative DNA topoisomerase III [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505240|emb|CAM39725.2| putative DNA topoisomerase III [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 866
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLDAS++SYGPCQTPTLGFCV+RHD+I FKPE +W L
Sbjct: 191 FQGKYGDLDASVVSYGPCQTPTLGFCVQRHDEILNFKPENFWRL 234
>gi|195340394|ref|XP_002036798.1| GM12581 [Drosophila sechellia]
gi|194130914|gb|EDW52957.1| GM12581 [Drosophila sechellia]
Length = 921
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+Q +YGDLD+SLISYGPCQTPTLGFCV+RHD I+TFKPE +W L L
Sbjct: 245 FQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQL 290
>gi|7510001|pir||T31599 hypothetical protein Y48C3A.q - Caenorhabditis elegans
Length = 646
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L
Sbjct: 201 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEQYWVL 244
>gi|392892251|ref|NP_001254382.1| Protein Y48C3A.14, isoform c [Caenorhabditis elegans]
gi|371571202|emb|CCF23413.1| Protein Y48C3A.14, isoform c [Caenorhabditis elegans]
Length = 733
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L
Sbjct: 65 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEQYWVL 108
>gi|219111227|ref|XP_002177365.1| DNA topoisomerase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411900|gb|EEC51828.1| DNA topoisomerase, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 868
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 46/52 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QG+YGDL+++++SYGPCQTPTLGFCV+R+ I+TFKPEPYW+L+L + G
Sbjct: 205 FQGRYGDLNSAVLSYGPCQTPTLGFCVQRYIDIQTFKPEPYWVLELAVMKRG 256
>gi|71756135|ref|XP_828982.1| DNA topoisomerase III [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834368|gb|EAN79870.1| DNA topoisomerase III, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|144583730|gb|ABP01567.1| topoisomerase IIIbeta [Trypanosoma brucei brucei]
gi|261334912|emb|CBH17906.1| DNA topoisomerase III, putative [Trypanosoma brucei gambiense
DAL972]
Length = 841
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYG+LDAS++SYGPCQTPTL FCV+RHD+I FKPE YW L T N G EW
Sbjct: 191 FQGKYGNLDASVVSYGPCQTPTLAFCVQRHDEILNFKPENYWKLVPTCNRYGSPITFEW 249
>gi|392892249|ref|NP_001254381.1| Protein Y48C3A.14, isoform a [Caenorhabditis elegans]
gi|371571205|emb|CCF23416.1| Protein Y48C3A.14, isoform a [Caenorhabditis elegans]
Length = 869
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L
Sbjct: 201 FQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQFKPEQYWVL 244
>gi|358334208|dbj|GAA52642.1| DNA topoisomerase III [Clonorchis sinensis]
Length = 887
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 47/52 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKYG+L+++L+S+GPCQTPTLGFCV+RHD+I++FKPE +W + +L++ G
Sbjct: 93 FQGKYGNLNSNLVSFGPCQTPTLGFCVKRHDRIQSFKPESFWRIKASLSVKG 144
>gi|170583127|ref|XP_001896443.1| DNA topoisomerase III beta-1 [Brugia malayi]
gi|158596370|gb|EDP34727.1| DNA topoisomerase III beta-1, putative [Brugia malayi]
Length = 858
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD++ IS+GPCQTPTLGFCV RHD I FKPEPYW+L
Sbjct: 203 FQGKYGNLDSTTISFGPCQTPTLGFCVTRHDLITQFKPEPYWIL 246
>gi|325189814|emb|CCA24294.1| PREDICTED: DNA topoisomerase 3beta1like isoform 1 putative [Albugo
laibachii Nc14]
Length = 928
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 47/55 (85%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+QG+YGDLD++L+SYGPCQTPTLGFCV+R D+I+ F+PEP+W +++ + + + +
Sbjct: 198 FQGRYGDLDSNLVSYGPCQTPTLGFCVDRFDQIQQFQPEPFWTIEVGITKDNQTI 252
>gi|407420057|gb|EKF38435.1| DNA topoisomerase III, putative [Trypanosoma cruzi marinkellei]
Length = 851
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+S++SYGPCQTPTL FCV+RHD+I FKPE YW L
Sbjct: 191 FQGKYGDLDSSVVSYGPCQTPTLAFCVQRHDEILNFKPENYWKL 234
>gi|71664077|ref|XP_819023.1| DNA topoisomerase III [Trypanosoma cruzi strain CL Brener]
gi|70884306|gb|EAN97172.1| DNA topoisomerase III, putative [Trypanosoma cruzi]
Length = 852
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+S++SYGPCQTPTL FCV+RHD+I FKPE YW L
Sbjct: 191 FQGKYGDLDSSVVSYGPCQTPTLAFCVQRHDEILNFKPENYWKL 234
>gi|407853208|gb|EKG06290.1| DNA topoisomerase III, putative [Trypanosoma cruzi]
Length = 852
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD+S++SYGPCQTPTL FCV+RHD+I FKPE YW L
Sbjct: 191 FQGKYGDLDSSVVSYGPCQTPTLAFCVQRHDEILNFKPENYWKL 234
>gi|168067110|ref|XP_001785468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662910|gb|EDQ49709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 869
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYG+LD+S+ISYGPCQTPTLGFCVERH +I TF P+P+W++ L+ G EW
Sbjct: 195 FQGKYGNLDSSVISYGPCQTPTLGFCVERHLRITTFVPQPFWVVRPHLSKGGHQLMLEW 253
>gi|428178584|gb|EKX47459.1| hypothetical protein GUITHDRAFT_69656 [Guillardia theta CCMP2712]
Length = 807
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKY DLD+ ++SYGPCQTPTLGFCVERH I+ F PEPYW+L T+ + G
Sbjct: 199 FQGKYSDLDSRIVSYGPCQTPTLGFCVERHILIQNFVPEPYWVLCPTIKIEG 250
>gi|256052775|ref|XP_002569927.1| prokaryotic DNA topoisomerase [Schistosoma mansoni]
gi|360043203|emb|CCD78615.1| putative prokaryotic DNA topoisomerase [Schistosoma mansoni]
Length = 1159
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+QGKYGDL+++L+S+GPCQTPTLGFCV+RHD+I++FKPE +W + L +W+S
Sbjct: 509 FQGKYGDLNSNLVSFGPCQTPTLGFCVKRHDQIQSFKPETFWRIKECL-FAIKWIS 563
>gi|159478116|ref|XP_001697150.1| hypothetical protein CHLREDRAFT_138607 [Chlamydomonas reinhardtii]
gi|158274624|gb|EDP00405.1| predicted protein [Chlamydomonas reinhardtii]
Length = 644
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+QG+YG+LDAS+ISYGPCQTPTL FCVERH I +F+PEP+W
Sbjct: 203 FQGRYGNLDASVISYGPCQTPTLNFCVERHQAITSFQPEPFW 244
>gi|402580660|gb|EJW74609.1| DNA topoisomerase [Wuchereria bancrofti]
Length = 268
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYGDLD++ IS+GPCQTPTLGFCV RHD I FKPEPYW+L
Sbjct: 37 FQGKYGDLDSTTISFGPCQTPTLGFCVTRHDLITQFKPEPYWIL 80
>gi|302765975|ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Selaginella moellendorffii]
gi|300165828|gb|EFJ32435.1| hypothetical protein SELMODRAFT_168492 [Selaginella moellendorffii]
Length = 871
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKYG+LD+S+IS+GPCQTPTLGFCVERH +I TF P+P+W L L+ G
Sbjct: 179 FQGKYGNLDSSVISFGPCQTPTLGFCVERHTQIITFVPKPFWTLHPRLSKGG 230
>gi|302792781|ref|XP_002978156.1| hypothetical protein SELMODRAFT_233065 [Selaginella moellendorffii]
gi|300154177|gb|EFJ20813.1| hypothetical protein SELMODRAFT_233065 [Selaginella moellendorffii]
Length = 877
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKYG+LD+S+IS+GPCQTPTLGFCVERH +I TF P+P+W L L+ G
Sbjct: 204 FQGKYGNLDSSVISFGPCQTPTLGFCVERHTQIITFVPKPFWTLHPRLSKGG 255
>gi|326432311|gb|EGD77881.1| DNA topoisomerase [Salpingoeca sp. ATCC 50818]
Length = 855
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYGDLD+ ++S+GPCQTPTL CV+RHD I+TF+PE YW LD+ +N
Sbjct: 198 FQGKYGDLDSQVLSFGPCQTPTLALCVQRHDLIQTFQPETYWTLDVRALIN 248
>gi|401401464|ref|XP_003881018.1| DNA topoisomerase, related [Neospora caninum Liverpool]
gi|325115430|emb|CBZ50985.1| DNA topoisomerase, related [Neospora caninum Liverpool]
Length = 924
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+QGKYGDLDASL+SYGPCQTPTL FCV+R+D I F+PE ++ LD ++ +
Sbjct: 247 FQGKYGDLDASLVSYGPCQTPTLQFCVQRYDDIHAFQPETFYTLDTSIRV 296
>gi|414886208|tpg|DAA62222.1| TPA: hypothetical protein ZEAMMB73_837809 [Zea mays]
Length = 374
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+ +ISYGPCQTPTLGFCV+RH +I TFKPE +W L
Sbjct: 37 FQGKYGNLDSRVISYGPCQTPTLGFCVQRHQQITTFKPEKFWSL 80
>gi|237838573|ref|XP_002368584.1| DNA topoisomerase III beta-1, putative [Toxoplasma gondii ME49]
gi|211966248|gb|EEB01444.1| DNA topoisomerase III beta-1, putative [Toxoplasma gondii ME49]
Length = 841
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+QGKYGDLDASL+SYGPCQTPTL FCV+R+D I F+PE ++ LD ++ +
Sbjct: 182 FQGKYGDLDASLVSYGPCQTPTLQFCVQRYDDIHAFQPETFYTLDTSIRV 231
>gi|449669651|ref|XP_002153907.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Hydra magnipapillata]
Length = 818
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+QGKYG+LD+SLISYGPCQTPTL FCV RHD I++F+PE YW + +L N
Sbjct: 197 FQGKYGNLDSSLISYGPCQTPTLAFCVARHDIIQSFQPETYWKIQASLKPN 247
>gi|384490193|gb|EIE81415.1| hypothetical protein RO3G_06120 [Rhizopus delemar RA 99-880]
Length = 761
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 43/48 (89%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYG+LD+++ISYGPCQTPTL FCVERHD+I+ F+PE +W + +T+
Sbjct: 182 FQGKYGNLDSTVISYGPCQTPTLSFCVERHDRIQGFQPESFWSIKVTV 229
>gi|296089603|emb|CBI39422.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L + NG EW
Sbjct: 239 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYITHNGYELQLEW 297
>gi|393909566|gb|EFO21893.2| DNA topoisomerase III beta-1 [Loa loa]
Length = 859
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+QGKYG+LD++ IS+GPCQTPTLGFCV RHD I F+PE YW+L+
Sbjct: 201 FQGKYGNLDSTTISFGPCQTPTLGFCVTRHDLITQFEPESYWVLE 245
>gi|312079442|ref|XP_003142175.1| DNA topoisomerase III beta-1 [Loa loa]
Length = 871
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+QGKYG+LD++ IS+GPCQTPTLGFCV RHD I F+PE YW+L+
Sbjct: 201 FQGKYGNLDSTTISFGPCQTPTLGFCVTRHDLITQFEPESYWVLE 245
>gi|357159190|ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Brachypodium
distachyon]
Length = 868
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L
Sbjct: 194 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQINTFKPEKFWSL 237
>gi|294948596|ref|XP_002785799.1| DNA topoisomerase 3-beta-1, putative [Perkinsus marinus ATCC 50983]
gi|239899907|gb|EER17595.1| DNA topoisomerase 3-beta-1, putative [Perkinsus marinus ATCC 50983]
Length = 850
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD+SL+SYGPCQTPTL FCV RH+ I+TF+PE Y+ +D+ L
Sbjct: 196 FQGKYGDLDSSLVSYGPCQTPTLWFCVRRHNDIQTFQPETYYTIDVKL 243
>gi|307105927|gb|EFN54174.1| hypothetical protein CHLNCDRAFT_53167 [Chlorella variabilis]
Length = 860
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN-----LNGEW 67
+Q KYG+LD+++ISYGPCQTPTL FCVERH I +F+PEP+W++ + LN EW
Sbjct: 200 FQAKYGNLDSAVISYGPCQTPTLNFCVERHQAIVSFQPEPFWVVRPRASQAGHALNLEW 258
>gi|294889461|ref|XP_002772824.1| DNA topoisomerase 3-beta-1, putative [Perkinsus marinus ATCC 50983]
gi|239877374|gb|EER04640.1| DNA topoisomerase 3-beta-1, putative [Perkinsus marinus ATCC 50983]
Length = 813
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+QGKYGDLD+SL+SYGPCQTPTL FCV RH+ I+TF+PE Y+ +D+ L
Sbjct: 196 FQGKYGDLDSSLVSYGPCQTPTLWFCVRRHNDIQTFQPETYYTIDVKL 243
>gi|356540116|ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
Length = 863
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L + NG EW
Sbjct: 193 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYIIQNGYEIQLEW 251
>gi|218202402|gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
Length = 866
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L
Sbjct: 194 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSL 237
>gi|115479969|ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa Japonica Group]
gi|215695029|dbj|BAG90220.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 866
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L
Sbjct: 194 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSL 237
>gi|255550676|ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223544485|gb|EEF46004.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
Length = 865
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L L ++G EW
Sbjct: 195 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQIATFKPEKFWSLRPHLIIDGYQLQLEW 253
>gi|323456344|gb|EGB12211.1| hypothetical protein AURANDRAFT_19616, partial [Aureococcus
anophagefferens]
Length = 696
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEW 67
+Q KY LDA +SYGPCQTPTLGF V R D+I TF+PEPYW D L ++G +
Sbjct: 190 FQSKYAGLDARTLSYGPCQTPTLGFVVRREDEIATFEPEPYWFPDAALEVDGAF 243
>gi|449498877|ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 864
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW-----LLDLTLNLNGEW 67
+QGKYG+LD+ LISYGPCQTPTLGFCV+RH +I TFKPE +W +L LN +W
Sbjct: 192 FQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYELNLDW 250
>gi|449459882|ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 867
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW-----LLDLTLNLNGEW 67
+QGKYG+LD+ LISYGPCQTPTLGFCV+RH +I TFKPE +W +L LN +W
Sbjct: 195 FQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYELNLDW 253
>gi|302830151|ref|XP_002946642.1| hypothetical protein VOLCADRAFT_79203 [Volvox carteri f.
nagariensis]
gi|300268388|gb|EFJ52569.1| hypothetical protein VOLCADRAFT_79203 [Volvox carteri f.
nagariensis]
Length = 896
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 36/40 (90%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G+YG+LDAS+ISYGPCQTPTL FCVERH I +F+PEP+W
Sbjct: 203 GRYGNLDASVISYGPCQTPTLNFCVERHQAIVSFQPEPFW 242
>gi|359478029|ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L + NG
Sbjct: 223 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYITHNG 274
>gi|339245323|ref|XP_003378587.1| DNA topoisomerase 3-beta-1 protein [Trichinella spiralis]
gi|316972491|gb|EFV56168.1| DNA topoisomerase 3-beta-1 protein [Trichinella spiralis]
Length = 819
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+ KYG++D+ LISYGPCQTPTLGFCV R D+++ FKPEPYW + + +G
Sbjct: 145 FHEKYGNVDSKLISYGPCQTPTLGFCVARLDEMKNFKPEPYWSMRAVVTSDG 196
>gi|384249381|gb|EIE22863.1| prokaryotic type I DNA topoisomerase [Coccomyxa subellipsoidea
C-169]
Length = 866
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LDAS+ISYGPCQTPTL FCV+RH I F+PE YW +
Sbjct: 198 FQGKYGNLDASVISYGPCQTPTLFFCVQRHQLITAFQPEDYWTI 241
>gi|221505540|gb|EEE31185.1| DNA topoisomerase III beta-1, putative [Toxoplasma gondii VEG]
Length = 842
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+QGKYGDLDASL+SYGPCQTPTL FCV+R+D I F+PE ++
Sbjct: 182 FQGKYGDLDASLVSYGPCQTPTLQFCVQRYDDIHAFQPETFY 223
>gi|242045216|ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
gi|241923856|gb|EER97000.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
Length = 866
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L
Sbjct: 192 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSL 235
>gi|224131522|ref|XP_002321105.1| predicted protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| predicted protein [Populus trichocarpa]
Length = 837
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 43/52 (82%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+QGKYG+LD+ +ISYGPCQTPTLGFCV+R+ +I TFKPE +W L + ++G
Sbjct: 168 FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDG 219
>gi|340372491|ref|XP_003384777.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Amphimedon
queenslandica]
Length = 849
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+Q Y L+ S+ISYGPCQTPTLGFCVERHD+I+ FKPE YW LD +++
Sbjct: 206 FQSLYSGLNNSVISYGPCQTPTLGFCVERHDEIQHFKPEKYWKLDCSVS 254
>gi|62319698|dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
Length = 865
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKY +LD +ISYGPCQTPTLGFCV+R+ I TFKPE +W L + +G EW
Sbjct: 196 FQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPCIRKDGYELQLEW 254
>gi|42569543|ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase III [Arabidopsis thaliana]
Length = 865
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
+QGKY +LD +ISYGPCQTPTLGFCV+R+ I TFKPE +W L + +G EW
Sbjct: 196 FQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRKDGYELQLEW 254
>gi|297826655|ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327049|gb|EFH57469.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKY +LD +ISYGPCQTPTLGFCV+R+ I TFKPE +W L
Sbjct: 196 FQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWAL 239
>gi|79323918|ref|NP_001031463.1| DNA topoisomerase III [Arabidopsis thaliana]
gi|51969720|dbj|BAD43552.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
gi|51969988|dbj|BAD43686.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
gi|330253526|gb|AEC08620.1| DNA topoisomerase III [Arabidopsis thaliana]
Length = 838
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QGKY +LD +ISYGPCQTPTLGFCV+R+ I TFKPE +W L
Sbjct: 169 FQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWAL 212
>gi|2114264|dbj|BAA20009.1| topoisomerase-III [Homo sapiens]
Length = 753
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+SLIS+GPCQTPTLGFCVERHDKI++FKPE YW+L +N +
Sbjct: 194 SSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTD 235
>gi|156084162|ref|XP_001609564.1| DNA topoisomerase [Babesia bovis T2Bo]
gi|154796816|gb|EDO05996.1| DNA topoisomerase, putative [Babesia bovis]
Length = 878
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+QGKYGDLD++ ISYGPCQTPTL FCV+R++ I F+ EPY+ L ++ G+++
Sbjct: 214 FQGKYGDLDSTCISYGPCQTPTLFFCVDRYNAIARFQEEPYYKLICDISYEGQYI 268
>gi|308805316|ref|XP_003079970.1| myosin class 11-1 (ISS) [Ostreococcus tauri]
gi|116058427|emb|CAL53616.1| myosin class 11-1 (ISS) [Ostreococcus tauri]
Length = 2117
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+ KY LDA ++SYGPCQTPTLGFCV+RH +I PEPYW+L+
Sbjct: 1782 FLNKYDRLDARVVSYGPCQTPTLGFCVQRHLEIVRHVPEPYWVLE 1826
>gi|308813033|ref|XP_003083823.1| DNA topoisomerase III alpha (ISS) [Ostreococcus tauri]
gi|116055705|emb|CAL57790.1| DNA topoisomerase III alpha (ISS) [Ostreococcus tauri]
Length = 382
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+ KY LDA ++SYGPCQTPTLGFCV+RH +I PEPYW+L+
Sbjct: 69 FLNKYDRLDARVVSYGPCQTPTLGFCVQRHLEIVRHVPEPYWVLE 113
>gi|268532954|ref|XP_002631605.1| Hypothetical protein CBG20786 [Caenorhabditis briggsae]
Length = 591
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+++ISYGPCQTPTLGFCV RHD+I FKPE YW+L T + + + S
Sbjct: 207 STVISYGPCQTPTLGFCVTRHDQIVQFKPESYWVLKTTFSCDSQTFS 253
>gi|303285318|ref|XP_003061949.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456360|gb|EEH53661.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 862
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++GKY LDAS++SYGPCQTPTL F VERH I PE YW+L +T
Sbjct: 197 FRGKYAALDASVVSYGPCQTPTLNFAVERHLDIAKHVPEDYWVLCVT 243
>gi|393245510|gb|EJD53020.1| prokaryotic type I DNA topoisomerase [Auricularia delicata
TFB-10046 SS5]
Length = 613
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL--NLNGE 66
L+ Q ++ +LD +ISYGPCQ PTLGF V R+++++ F+PEP+W + L + N++GE
Sbjct: 186 LQTLKLQNQFQELDGQVISYGPCQFPTLGFVVSRYEQVQAFRPEPFWYIYLAISPNVDGE 245
>gi|145347645|ref|XP_001418273.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578502|gb|ABO96566.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 863
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+ KY LDA ++SYGPCQTPTLGF V+RH +I PEPYW LD + +
Sbjct: 215 FLNKYDRLDARVVSYGPCQTPTLGFAVQRHLEIIRHVPEPYWALDASFD 263
>gi|395333070|gb|EJF65448.1| prokaryotic type I DNA topoisomerase, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 1032
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L+ + Q +Y L LISYGPCQ PTLGF V R++K++ FKPEP+W + L+L
Sbjct: 186 LQTLNLQRRYEALKKELISYGPCQFPTLGFVVARYNKVKNFKPEPFWYIFLSL 238
>gi|412993300|emb|CCO16833.1| predicted protein [Bathycoccus prasinos]
Length = 949
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+Q K+ D+ +SYGPCQTPTLGFCV+RH +I F PE +W L L L
Sbjct: 231 FQDKFSGFDSRCVSYGPCQTPTLGFCVKRHLEIIRFVPESFWRLKLNL 278
>gi|255073139|ref|XP_002500244.1| predicted protein [Micromonas sp. RCC299]
gi|226515506|gb|ACO61502.1| predicted protein [Micromonas sp. RCC299]
Length = 861
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+QG+Y LDAS+ISYGPCQTPTL F V+RH +I + PE +W L
Sbjct: 197 FQGRYSHLDASVISYGPCQTPTLNFAVQRHLEIVSHTPEDFWSL 240
>gi|308158051|gb|EFO60919.1| DNA topoisomerase III [Giardia lamblia P15]
Length = 973
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ A ++ DL +S+ISYGPCQTPTL FCV RHD+I+ F+P+ + LD+
Sbjct: 185 FQTAHLHAQFADLQSSVISYGPCQTPTLSFCVSRHDEIQRFRPKQIFSLDV 235
>gi|159119151|ref|XP_001709794.1| DNA topoisomerase III [Giardia lamblia ATCC 50803]
gi|157437911|gb|EDO82120.1| DNA topoisomerase III [Giardia lamblia ATCC 50803]
Length = 973
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ A ++ DL +S+ISYGPCQTPTL FCV RHD+I+ F+P+ + LD+
Sbjct: 185 FQTAHLHAQFADLQSSVISYGPCQTPTLSFCVSRHDEIQRFRPKQIFSLDV 235
>gi|399216452|emb|CCF73140.1| unnamed protein product [Babesia microti strain RI]
Length = 810
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+Q K+G+L+ LISYGPCQTPTL FCVER +I++F+P+ Y+
Sbjct: 195 FQDKFGNLNTKLISYGPCQTPTLFFCVERFKQIKSFQPQTYY 236
>gi|392570043|gb|EIW63216.1| prokaryotic type I DNA topoisomerase [Trametes versicolor FP-101664
SS1]
Length = 961
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L+ + Q ++ L LISYGPCQ PTLGF V R++K++ FKPEP+W + L+L
Sbjct: 186 LQTLNLQNRHEALKRELISYGPCQFPTLGFVVARYNKLKNFKPEPFWYIYLSL 238
>gi|146182668|ref|XP_001024996.2| DNA topoisomerase family protein [Tetrahymena thermophila]
gi|146143729|gb|EAS04751.2| DNA topoisomerase family protein [Tetrahymena thermophila SB210]
Length = 858
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 5 LKLNLKEADYQ-----GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
LKL L + +Q KY ISYGPCQTPTL FCVERHD+I FKP+ Y+ +++
Sbjct: 186 LKLGLSFSKFQTRYLQNKYNIQGKKKISYGPCQTPTLAFCVERHDEIENFKPQTYYTVEV 245
Query: 60 TLN 62
L+
Sbjct: 246 NLS 248
>gi|340508777|gb|EGR34411.1| hypothetical protein IMG5_012580 [Ichthyophthirius multifiliis]
Length = 789
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++ KY DL+ +I+YGPCQTPTLGFCV R D+I++FKP+ ++ L
Sbjct: 252 FRKKYPDLNEKMITYGPCQTPTLGFCVRREDEIKSFKPKLFYRL 295
>gi|118385846|ref|XP_001026048.1| DNA topoisomerase family protein [Tetrahymena thermophila]
gi|89307815|gb|EAS05803.1| DNA topoisomerase family protein [Tetrahymena thermophila SB210]
Length = 1374
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ +Y +L+ ++IS+GPCQTPTLGFCVER D+I+ FKP Y+ + T
Sbjct: 732 FRNRYPELNENIISFGPCQTPTLGFCVEREDEIKNFKPRLYFRIRATF 779
>gi|357462899|ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula]
gi|355490779|gb|AES71982.1| DNA topoisomerase [Medicago truncatula]
Length = 1024
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 27/71 (38%)
Query: 14 YQGKYGDLDASLIS---------------------------YGPCQTPTLGFCVERHDKI 46
+QGKYG+LDA +IS YGPCQTPTLGFCV+R+ +I
Sbjct: 317 FQGKYGNLDARVISLVFCSLLSSGGPLVINQLLDWICIANSYGPCQTPTLGFCVQRYLQI 376
Query: 47 RTFKPEPYWLL 57
TFKPE +W L
Sbjct: 377 NTFKPEKFWSL 387
>gi|300175415|emb|CBK20726.2| unnamed protein product [Blastocystis hominis]
Length = 891
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPY 54
++ KY DLD+S+ISYGPCQ PTLGFCV+R D I+ FK E +
Sbjct: 195 FRNKYSDLDSSVISYGPCQIPTLGFCVDRFDLIQNFKGEAF 235
>gi|403352748|gb|EJY75891.1| DNA topoisomerase [Oxytricha trifallax]
Length = 1342
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 5 LKLNLKEADYQGKY------GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
LK+ + + +Q +Y G + +I+YGPCQTPTLGFCV++ +KI+ F PEPYW ++
Sbjct: 697 LKIGVAFSRFQTQYFQYLLRGQHEIRMITYGPCQTPTLGFCVDQAEKIKKFIPEPYWSIE 756
Query: 59 LTL 61
+
Sbjct: 757 TVI 759
>gi|452823186|gb|EME30198.1| DNA topoisomerase III alpha [Galdieria sulphuraria]
Length = 853
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ K+ LD+ L+SYGPCQTPTLGFCV R D+I F PE ++L+ + + N
Sbjct: 202 FHDKFSSLDSKLVSYGPCQTPTLGFCVGRLDEISKFSPETFFLVVVNVRKN 252
>gi|118389870|ref|XP_001027980.1| DNA topoisomerase family protein [Tetrahymena thermophila]
gi|89309750|gb|EAS07738.1| DNA topoisomerase family protein [Tetrahymena thermophila SB210]
Length = 916
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ KY DL+ IS+GPCQTPTLGFCVER D+I+ F P + + LTL
Sbjct: 402 FRNKYPDLNKRTISFGPCQTPTLGFCVEREDQIKKFIPSLLYKVKLTL 449
>gi|353239154|emb|CCA71076.1| related to DNA topoisomerase III alpha [Piriformospora indica DSM
11827]
Length = 632
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 15 QGKYGDL-DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q ++G+L + L+SYGPCQ PTLGF V R+++++ F PE +W + L LN GE
Sbjct: 161 QNRFGNLLEGKLVSYGPCQFPTLGFVVSRYEQVKAFVPETFWYIYLALNRPGE 213
>gi|209878332|ref|XP_002140607.1| DNA topoisomerase family protein [Cryptosporidium muris RN66]
gi|209556213|gb|EEA06258.1| DNA topoisomerase family protein [Cryptosporidium muris RN66]
Length = 857
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
KYGD + S++SYGPCQTPTL F V+R DKI F PE ++ L++T+
Sbjct: 224 KYGDFNNSILSYGPCQTPTLFFVVQRRDKILGFSPEKFYYLNVTI 268
>gi|449678511|ref|XP_002155556.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Hydra magnipapillata]
Length = 843
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 37/48 (77%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
D ++SYGPCQTPTL FCV+RH +I+ FK P++++ + +N+ G+ ++
Sbjct: 242 DQKVVSYGPCQTPTLWFCVQRHKEIQNFKSTPFYVVSVVVNIQGQNIT 289
>gi|443926203|gb|ELU44921.1| DNA topoisomerase type I [Rhizoctonia solani AG-1 IA]
Length = 3005
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
Q ++ L LISYGPCQ PTLGF V R+++++ F PEP+W + L++
Sbjct: 2254 QPRFPQLQEGLISYGPCQFPTLGFVVSRYEQVQAFVPEPFWYIHLSI 2300
>gi|320034640|gb|EFW16583.1| DNA topoisomerase 3-beta [Coccidioides posadasii str. Silveira]
Length = 634
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L LISYG CQ PTLGF V+R+ +++ FKPEPYW + +T +G+ V+
Sbjct: 192 GALSERLISYGSCQFPTLGFVVDRYFRVKNFKPEPYWSIKVTHARDGKTVN 242
>gi|345568376|gb|EGX51270.1| hypothetical protein AOL_s00054g340 [Arthrobotrys oligospora ATCC
24927]
Length = 652
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
QG++G +LISYG CQ PTLGF VER+ +++ F PEP+W L L +G
Sbjct: 196 QGRWGLAGDALISYGSCQFPTLGFVVERYMRVKNFVPEPFWSLKLMHTRDG 246
>gi|402225468|gb|EJU05529.1| prokaryotic type I DNA topoisomerase [Dacryopinax sp. DJM-731 SS1]
Length = 866
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q + DL +ISYGPCQ PTLGF V R+ +++ F PE +W + L++ ++GE
Sbjct: 192 QNQVPDLQRKMISYGPCQFPTLGFVVSRYQQVQAFVPETFWYIYLSIMVDGE 243
>gi|328766432|gb|EGF76486.1| hypothetical protein BATDEDRAFT_14853, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 612
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
QG + +L ++SYGPCQ PTLGF V+R K+++F PE +W + L + NG
Sbjct: 187 QGHFKELSEQILSYGPCQFPTLGFVVDRFRKVQSFIPEKFWSITLEVTRNG 237
>gi|223999503|ref|XP_002289424.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220974632|gb|EED92961.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 672
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ISYGPCQ PTLGF VER +I TF PE +W +++T+ LN
Sbjct: 227 VISYGPCQFPTLGFVVERWARIETFVPEDFWFIEMTIRLN 266
>gi|358057730|dbj|GAA96385.1| hypothetical protein E5Q_03052 [Mixia osmundae IAM 14324]
Length = 882
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L+ ++Q + +L S+ISYGPCQ P LGF VE+++++R F E +W + TL +G V
Sbjct: 191 LQTFNFQAAFPELQGSVISYGPCQFPALGFVVEQYERMRNFVAEAFWSIQSTLRRDGATV 250
Query: 69 S 69
+
Sbjct: 251 T 251
>gi|170093393|ref|XP_001877918.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647777|gb|EDR12021.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 716
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q ++ L+ ++SYGPCQ PTLGF V+R+++++ F+PE +W + L+L +GE
Sbjct: 192 QRQFAQLEG-VLSYGPCQFPTLGFVVQRYNRVKAFRPETFWYIYLSLTRDGE 242
>gi|302497864|ref|XP_003010931.1| hypothetical protein ARB_02829 [Arthroderma benhamiae CBS 112371]
gi|291174477|gb|EFE30291.1| hypothetical protein ARB_02829 [Arthroderma benhamiae CBS 112371]
Length = 563
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 141 LTLSLRPILQRGNLSEA-SQLISYGSCQFPTLGFVVERYWRVRNFIPEPFWSIKLMHQKA 199
Query: 65 GEWVS 69
G WV+
Sbjct: 200 GTWVN 204
>gi|302658516|ref|XP_003020961.1| hypothetical protein TRV_04955 [Trichophyton verrucosum HKI 0517]
gi|291184833|gb|EFE40343.1| hypothetical protein TRV_04955 [Trichophyton verrucosum HKI 0517]
Length = 573
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 141 LTLSLRPLLQRGNLSEA-SQLISYGSCQFPTLGFIVERYWRVRNFIPEPFWSIKLMHQKA 199
Query: 65 GEWVS 69
G WV+
Sbjct: 200 GTWVN 204
>gi|119194847|ref|XP_001248027.1| hypothetical protein CIMG_01798 [Coccidioides immitis RS]
Length = 634
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L LISYG CQ PTLGF V+R+ +++ FKPEP+W + +T +G+ V+
Sbjct: 192 GALSERLISYGSCQFPTLGFVVDRYFRVKNFKPEPFWSIKVTHARDGKTVN 242
>gi|345487699|ref|XP_001605592.2| PREDICTED: DNA topoisomerase 3-alpha-like [Nasonia vitripennis]
Length = 1138
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT-----LNLNGEW 67
+L LISYGPCQ PTLGF VER I F+PEPYW L +T LN+ W
Sbjct: 245 NLADMLISYGPCQFPTLGFVVERFLAIERFEPEPYWKLKVTHLQNELNVEFRW 297
>gi|397641070|gb|EJK74455.1| hypothetical protein THAOC_03864, partial [Thalassiosira oceanica]
Length = 948
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ISYGPCQ PTLGF VER +I+TF E +W L++T+ LN +
Sbjct: 274 VISYGPCQFPTLGFVVERWARIQTFVKEDFWFLEMTIRLNAD 315
>gi|403411970|emb|CCL98670.1| predicted protein [Fibroporia radiculosa]
Length = 929
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L+ + Q ++ +L +ISYGPCQ PTLGF V R++++++F PE +W + L+L
Sbjct: 186 LQTLNLQRRFENLKDDIISYGPCQFPTLGFVVSRYNQVKSFVPETFWYIFLSL 238
>gi|126649305|ref|XP_001388324.1| DNA topoisomerase III beta-1 [Cryptosporidium parvum Iowa II]
gi|32398820|emb|CAD98530.1| DNA topoisomerase III beta-1, probable [Cryptosporidium parvum]
gi|126117418|gb|EAZ51518.1| DNA topoisomerase III beta-1, putative [Cryptosporidium parvum Iowa
II]
Length = 835
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 15 QGKYGDLD-ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ K+GD + +S+ISYGPCQTPTL F V+R D I +F PE Y+ + TL+ + +
Sbjct: 197 KSKFGDFNKSSIISYGPCQTPTLFFTVQRRDSINSFIPEKYYTISATLSKDSQ 249
>gi|260946535|ref|XP_002617565.1| hypothetical protein CLUG_03009 [Clavispora lusitaniae ATCC 42720]
gi|238849419|gb|EEQ38883.1| hypothetical protein CLUG_03009 [Clavispora lusitaniae ATCC 42720]
Length = 627
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
D ++SYG CQ PTL F V+R+ ++R F+PEP+W +DL ++ + VS
Sbjct: 208 DKDVVSYGTCQFPTLSFVVDRYLRVRKFRPEPFWFIDLVVDQKNQKVS 255
>gi|209875815|ref|XP_002139350.1| DNA topoisomerase family protein [Cryptosporidium muris RN66]
gi|209554956|gb|EEA05001.1| DNA topoisomerase family protein [Cryptosporidium muris RN66]
Length = 843
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
S +SYGPCQ PTLGF V+R+ KI +FK EP+W + +TL+ + E
Sbjct: 258 STLSYGPCQFPTLGFVVDRYRKIVSFKSEPFWQISVTLSFHSE 300
>gi|443894350|dbj|GAC71698.1| DNA topoisomerase III alpha [Pseudozyma antarctica T-34]
Length = 1780
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ISYGPCQ PTLGF V+R++K+ F PEP+WLL L
Sbjct: 1013 VISYGPCQFPTLGFVVDRYNKVIEFVPEPFWLLQL 1047
>gi|299752369|ref|XP_001830882.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
gi|298409801|gb|EAU90946.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
Length = 929
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
S++SYGPCQ PTLGF V+R+ K++ F+PE +W + L LN
Sbjct: 200 SVVSYGPCQFPTLGFVVQRYLKVQDFRPETFWYIHLELN 238
>gi|408398943|gb|EKJ78068.1| hypothetical protein FPSE_01529 [Fusarium pseudograminearum CS3096]
Length = 666
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L+ +SYG CQ PTLGF V+R+ +++ F PEP+W + LT N +G+ V
Sbjct: 200 GPLEGLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKLTHNRDGKKV 249
>gi|410082299|ref|XP_003958728.1| hypothetical protein KAFR_0H01830 [Kazachstania africana CBS 2517]
gi|372465317|emb|CCF59593.1| hypothetical protein KAFR_0H01830 [Kazachstania africana CBS 2517]
Length = 656
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+ISYGPCQ PTLGF V+R+++I+ F PE +W + L LN
Sbjct: 228 IISYGPCQFPTLGFVVDRYERIKHFTPEEFWYIQLQLN 265
>gi|321258468|ref|XP_003193955.1| DNA topoisomerase type I [Cryptococcus gattii WM276]
gi|317460425|gb|ADV22168.1| DNA topoisomerase type I, putative [Cryptococcus gattii WM276]
Length = 923
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
QG+ DL LISYGPCQ PTLGF V+++++++ F PE +W + + L E
Sbjct: 199 QGRVPDLAEQLISYGPCQFPTLGFVVDQYNRVQAFVPEMFWYIFVALEREHE 250
>gi|4263718|gb|AAD15404.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
Length = 836
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 28 YGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
YGPCQTPTLGFCV+R+ I TFKPE +W L + +G EW
Sbjct: 229 YGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRKDGYELQLEW 273
>gi|164657941|ref|XP_001730096.1| hypothetical protein MGL_2478 [Malassezia globosa CBS 7966]
gi|159103991|gb|EDP42882.1| hypothetical protein MGL_2478 [Malassezia globosa CBS 7966]
Length = 694
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
LD+ L+SYGPCQ PTLGF V+ + ++ TF PE +W +DL
Sbjct: 110 LDSMLLSYGPCQFPTLGFVVDHYKRVETFVPEEFWSIDL 148
>gi|449546712|gb|EMD37681.1| hypothetical protein CERSUDRAFT_50044 [Ceriporiopsis subvermispora
B]
Length = 1000
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L LNL+E D +ISYGPCQ PTLGF V R+++++ F PEP+W + L+L
Sbjct: 236 LQTLNLQER------FDALKEVISYGPCQFPTLGFVVSRYNQVKAFVPEPFWYIYLSL 287
>gi|403166354|ref|XP_003326221.2| DNA topoisomerase III [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166208|gb|EFP81802.2| DNA topoisomerase III [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1124
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
Q ++ L SLISYGPCQ PTLGF V+++DK++ F E +W + + L
Sbjct: 256 QTRFHQLADSLISYGPCQFPTLGFVVDQYDKVKAFVAEAFWYIHVVL 302
>gi|336371414|gb|EGN99753.1| hypothetical protein SERLA73DRAFT_52441 [Serpula lacrymans var.
lacrymans S7.3]
Length = 875
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+SYGPCQ PTLGF V R++++++F PEP+W + L+L+
Sbjct: 205 VSYGPCQFPTLGFVVSRYNQVKSFLPEPFWYIYLSLS 241
>gi|343429570|emb|CBQ73143.1| related to DNA topoisomerase III alpha [Sporisorium reilianum SRZ2]
Length = 998
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ISYGPCQ PTLGF V+R++K+ F PEP+WLL +
Sbjct: 208 VISYGPCQFPTLGFVVDRYNKVVHFVPEPFWLLQV 242
>gi|358391864|gb|EHK41268.1| hypothetical protein TRIATDRAFT_249816 [Trichoderma atroviride IMI
206040]
Length = 663
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L ++SYG CQ PTLGF V+R+ +++ F PEP+W + LT N +G+ V
Sbjct: 197 GPLAELVLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGISLTHNKDGKQV 246
>gi|222641861|gb|EEE69993.1| hypothetical protein OsJ_29901 [Oryza sativa Japonica Group]
Length = 729
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
I YGPCQTPTLGFCV+R+ +I TFKPE +W L + +G +
Sbjct: 69 IRYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYVIKDGNEI 111
>gi|392578148|gb|EIW71276.1| hypothetical protein TREMEDRAFT_73248 [Tremella mesenterica DSM
1558]
Length = 1002
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Q + +L +ISYGPCQ PTLGF V++++++++F PEP+W +
Sbjct: 199 QNRVPELGQQVISYGPCQFPTLGFVVDQYNRVQSFVPEPFWYI 241
>gi|242785292|ref|XP_002480564.1| DNA topoisomerase III, putative [Talaromyces stipitatus ATCC 10500]
gi|218720711|gb|EED20130.1| DNA topoisomerase III, putative [Talaromyces stipitatus ATCC 10500]
Length = 660
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT-----LNLNGEW 67
LD ISYG CQ PTLGF V+R+ +++ FKPEP+W + + +N+N W
Sbjct: 206 LDQGPISYGSCQFPTLGFVVDRYLRVQNFKPEPFWAIAVVHKRDDINVNFNW 257
>gi|449304688|gb|EMD00695.1| hypothetical protein BAUCODRAFT_60941 [Baudoinia compniacensis UAMH
10762]
Length = 675
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
QG++G + +ISYG CQ PTLGF VER+ ++R F PE +W + +
Sbjct: 206 QGRFGAEERQVISYGSCQFPTLGFVVERYLRVRNFVPETFWTIKV 250
>gi|226293455|gb|EEH48875.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb18]
Length = 632
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPEP+W + ++ +G+ V+
Sbjct: 203 GVLEDRIISYGSCQFPTLGFVVDRYFRVKNFKPEPFWAIKVSHLRDGKTVN 253
>gi|225684061|gb|EEH22345.1| DNA topoisomerase III [Paracoccidioides brasiliensis Pb03]
Length = 710
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPEP+W + ++ +G+ V+
Sbjct: 198 GVLEDRIISYGSCQFPTLGFVVDRYFRVKNFKPEPFWAIKVSHLRDGKTVN 248
>gi|219122509|ref|XP_002181586.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406862|gb|EEC46800.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1009
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
G + +ISYGPCQ PTLGF VER +I TF PE +W L+L ++++
Sbjct: 259 GFAEQGVISYGPCQFPTLGFVVERWARIETFIPEDFWHLELAISVD 304
>gi|340520630|gb|EGR50866.1| DNA topoisomerase [Trichoderma reesei QM6a]
Length = 663
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L ++SYG CQ PTLGF V+R+ +++ F PEP+W + LT N +G+ V
Sbjct: 200 GPLADLVLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGISLTHNKDGKQV 249
>gi|71016361|ref|XP_758895.1| hypothetical protein UM02748.1 [Ustilago maydis 521]
gi|46098326|gb|EAK83559.1| hypothetical protein UM02748.1 [Ustilago maydis 521]
Length = 1325
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ISYGPCQ PTLGF V+R+ K+ F PEP+WLL +
Sbjct: 303 VISYGPCQFPTLGFVVDRYKKVVHFVPEPFWLLQV 337
>gi|212527998|ref|XP_002144156.1| DNA topoisomerase III, putative [Talaromyces marneffei ATCC 18224]
gi|210073554|gb|EEA27641.1| DNA topoisomerase III, putative [Talaromyces marneffei ATCC 18224]
Length = 662
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT-----LNLNGEW 67
LD ISYG CQ PTLGF V+R+ +++ FKPEP+W + + +N+N W
Sbjct: 206 LDQGPISYGSCQFPTLGFVVDRYLRVQNFKPEPFWAIAVIHKRDDINVNFNW 257
>gi|440291485|gb|ELP84754.1| DNA topoisomerase 3-beta-1, putative [Entamoeba invadens IP1]
Length = 853
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
K+ + +L+S+GPCQTPTLGFCV+R+ I F P+ Y+++ + +N
Sbjct: 194 KFPRMGDALVSFGPCQTPTLGFCVQRYKDILNFVPKAYYIVKVNVN 239
>gi|224013088|ref|XP_002295196.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969158|gb|EED87500.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1417
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 32 QTPTLGFCVERHDKIRTFKPEPYWLLDL 59
TPTLGFCV+RH ++ TFKPEPYWL+DL
Sbjct: 781 HTPTLGFCVQRHVEMETFKPEPYWLMDL 808
>gi|389741773|gb|EIM82961.1| prokaryotic type I DNA topoisomerase [Stereum hirsutum FP-91666
SS1]
Length = 637
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+A +ISYGPCQ PTLGF V R++++++F PE +W + L++ N
Sbjct: 200 EAGVISYGPCQFPTLGFVVSRYNQVQSFVPEAFWYIYLSIEPNA 243
>gi|452989907|gb|EME89662.1| hypothetical protein MYCFIDRAFT_193524 [Pseudocercospora fijiensis
CIRAD86]
Length = 773
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
S+ISYGPCQ PTLGF VER+ +++ F PEP+W
Sbjct: 312 GSVISYGPCQFPTLGFVVERYFRVQNFVPEPFW 344
>gi|405122849|gb|AFR97615.1| DNA topoisomerase type I [Cryptococcus neoformans var. grubii H99]
Length = 959
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q + DL LISYGPCQ PTLGF VE++++++ F PE +W + + L E
Sbjct: 199 QVRVPDLAEQLISYGPCQFPTLGFVVEQYNRVQAFVPETFWYIFVALEREHE 250
>gi|154315224|ref|XP_001556935.1| hypothetical protein BC1G_04651 [Botryotinia fuckeliana B05.10]
Length = 647
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
G L ++SYG CQ PTLGF V+R+ K++ F PEP+W + +T N
Sbjct: 136 GPLATKMLSYGSCQFPTLGFVVDRYFKVKNFVPEPFWSIKVTHN 179
>gi|322707318|gb|EFY98897.1| DNA topoisomerase III [Metarhizium anisopliae ARSEF 23]
Length = 680
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G +++ +SYG CQ PTLGF V+R+ +++ F PEP+W + L N +G+ V+
Sbjct: 220 GPMESLTLSYGSCQFPTLGFVVDRYFRVKNFIPEPFWSISLMHNRDGKKVN 270
>gi|402086932|gb|EJT81830.1| DNA topoisomerase III [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 671
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G L ++SYG CQ PTLGF V+R+ +++ F PEP+W + L ++ +G+
Sbjct: 201 GPLAEHMLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWTIKLVVSKDGK 248
>gi|347839519|emb|CCD54091.1| similar to DNA topoisomerase III [Botryotinia fuckeliana]
Length = 665
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
G L ++SYG CQ PTLGF V+R+ K++ F PEP+W + +T N
Sbjct: 203 GPLAKKMLSYGSCQFPTLGFVVDRYFKVKNFVPEPFWSIKVTHN 246
>gi|328860051|gb|EGG09158.1| hypothetical protein MELLADRAFT_34533 [Melampsora larici-populina
98AG31]
Length = 749
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ISYGPCQ PTLGF V+++DK+ F PE +W + +TL
Sbjct: 203 TVISYGPCQFPTLGFVVDQYDKVAAFVPETFWYIHVTL 240
>gi|327353792|gb|EGE82649.1| DNA topoisomerase [Ajellomyces dermatitidis ATCC 18188]
Length = 757
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 197 LTLSLRPVLQRGNLSEA-SQLISYGSCQFPTLGFIVERYWRVRNFIPEPFWSIKL 250
>gi|239608653|gb|EEQ85640.1| DNA topoisomerase III [Ajellomyces dermatitidis ER-3]
Length = 674
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 197 LTLSLRPVLQRGNLSEA-SQLISYGSCQFPTLGFIVERYWRVRNFIPEPFWSIKL 250
>gi|261191759|ref|XP_002622287.1| DNA topoisomerase III [Ajellomyces dermatitidis SLH14081]
gi|239589603|gb|EEQ72246.1| DNA topoisomerase III [Ajellomyces dermatitidis SLH14081]
Length = 649
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 172 LTLSLRPVLQRGNLSEA-SQLISYGSCQFPTLGFIVERYWRVRNFIPEPFWSIKL 225
>gi|46124677|ref|XP_386892.1| hypothetical protein FG06716.1 [Gibberella zeae PH-1]
Length = 695
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L+ +SYG CQ PTLGF V+R+ +++ F PEP+W + LT N + + V
Sbjct: 200 GPLEGLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKLTHNRDSKKV 249
>gi|149241681|ref|XP_001526340.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450463|gb|EDK44719.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 619
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 31/37 (83%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++SYG CQ PTLGF V+R+ ++++FKPEP+W ++ T+
Sbjct: 205 VVSYGTCQFPTLGFVVDRYKRVQSFKPEPFWFIEPTV 241
>gi|358255314|dbj|GAA57027.1| DNA topoisomerase III, partial [Clonorchis sinensis]
Length = 1106
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L LISYG CQ PTLGF VER ++ F PEP+W + +T NG+ V
Sbjct: 174 LSNQLISYGSCQFPTLGFVVERFREVDRFIPEPFWRIVVTAEYNGKAV 221
>gi|58259767|ref|XP_567296.1| DNA topoisomerase type I [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229346|gb|AAW45779.1| DNA topoisomerase type I, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 828
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q + DL LISYGPCQ PTLGF VE++ +++ F PE +W + + L E
Sbjct: 199 QVRVPDLAEQLISYGPCQFPTLGFVVEQYTRVQAFVPETFWYIFVALEREHE 250
>gi|134116726|ref|XP_773035.1| hypothetical protein CNBJ3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255655|gb|EAL18388.1| hypothetical protein CNBJ3110 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
Q + DL LISYGPCQ PTLGF VE++ +++ F PE +W + + L E
Sbjct: 199 QVRVPDLAEQLISYGPCQFPTLGFVVEQYTRVQAFVPETFWYIFVALEREHE 250
>gi|315040584|ref|XP_003169669.1| hypothetical protein MGYG_07839 [Arthroderma gypseum CBS 118893]
gi|311345631|gb|EFR04834.1| hypothetical protein MGYG_07839 [Arthroderma gypseum CBS 118893]
Length = 671
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 211 SQLISYGSCQFPTLGFVVERYLRVRNFIPEPFWSIKL 247
>gi|145527750|ref|XP_001449675.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417263|emb|CAK82278.1| unnamed protein product [Paramecium tetraurelia]
Length = 949
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+Q KY +D ++++GPCQTPTLGFCVERH++I F P ++ + L++
Sbjct: 220 FQKKY-SMD-QMVTFGPCQTPTLGFCVERHEEIVNFVPRAFYTIKLSI 265
>gi|336273746|ref|XP_003351627.1| TOP3 protein [Sordaria macrospora k-hell]
gi|380095906|emb|CCC05953.1| putative TOP3 protein [Sordaria macrospora k-hell]
Length = 603
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G LD ++SYG CQ PTLGF V+R+ ++R F PEP+W
Sbjct: 146 GPLDGLVLSYGSCQFPTLGFVVDRYFRVRNFVPEPFW 182
>gi|428178558|gb|EKX47433.1| hypothetical protein GUITHDRAFT_50898, partial [Guillardia theta
CCMP2712]
Length = 596
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
K+ D L+S+GPCQTPTL FCV R ++IR F P +W +++ + +
Sbjct: 204 KFNDSKLKLLSFGPCQTPTLFFCVRRDEEIRRFVPRKFWRIEVEVEV 250
>gi|406701616|gb|EKD04732.1| hypothetical protein A1Q2_00962 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1818
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 31/39 (79%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
D L+SYGPCQ PTLGF V++++++++F PE +W + +T
Sbjct: 179 DQKLVSYGPCQFPTLGFVVDQYNRVQSFVPEQFWYISVT 217
>gi|401881458|gb|EJT45758.1| DNA topoisomerase 3-beta [Trichosporon asahii var. asahii CBS 2479]
Length = 1049
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 31/39 (79%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
D L+SYGPCQ PTLGF V++++++++F PE +W + +T
Sbjct: 392 DQKLVSYGPCQFPTLGFVVDQYNRVQSFVPEQFWYISVT 430
>gi|296810820|ref|XP_002845748.1| DNA topoisomerase III [Arthroderma otae CBS 113480]
gi|238843136|gb|EEQ32798.1| DNA topoisomerase III [Arthroderma otae CBS 113480]
Length = 637
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 5 LKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
L L+L+ +G + + LISYG CQ PTLGF VER+ ++R F PEP+W + L
Sbjct: 197 LTLSLRPILQRGNLSEA-SQLISYGSCQFPTLGFIVERYWRVRNFIPEPFWSIKLMHRKA 255
Query: 65 GEWVS 69
G+ V+
Sbjct: 256 GKRVN 260
>gi|118383692|ref|XP_001025000.1| DNA topoisomerase family protein [Tetrahymena thermophila]
gi|89306767|gb|EAS04755.1| DNA topoisomerase family protein [Tetrahymena thermophila SB210]
Length = 1386
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL------NGEW 67
KY DL+ I++GPCQTPTL FCV+R D+I+ F +P++ + ++L N EW
Sbjct: 441 KYEDLNNKKITFGPCQTPTLSFCVQRDDEIKDFISKPFYRIIPKISLVPNELINLEW 497
>gi|451997773|gb|EMD90238.1| hypothetical protein COCHEDRAFT_1104554 [Cochliobolus
heterostrophus C5]
Length = 669
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G+ LISYG CQ PTLGF V+R+ ++R F PEP+W + + +G
Sbjct: 203 GEERGKLISYGSCQFPTLGFVVDRYLRVRNFVPEPFWYIKVAHEKDG 249
>gi|169622904|ref|XP_001804860.1| hypothetical protein SNOG_14677 [Phaeosphaeria nodorum SN15]
gi|160704874|gb|EAT77869.2| hypothetical protein SNOG_14677 [Phaeosphaeria nodorum SN15]
Length = 681
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
GD +ISYG CQ PTLGF V+R+ ++R F PEP+W + +
Sbjct: 210 GDERGKVISYGSCQFPTLGFVVDRYLRVRNFVPEPFWYIKV 250
>gi|156087759|ref|XP_001611286.1| DNA topoisomerase family protein [Babesia bovis]
gi|154798540|gb|EDO07718.1| DNA topoisomerase family protein [Babesia bovis]
Length = 633
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
D ++ ++SYGPCQ PTLGF V+R KI +F+PE +W + + + G+
Sbjct: 210 DTESKVLSYGPCQLPTLGFVVDRFFKIESFQPESFWSIQVFIESGGK 256
>gi|340505685|gb|EGR31996.1| hypothetical protein IMG5_098220 [Ichthyophthirius multifiliis]
Length = 482
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 13 DYQGKYGDLDAS--LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ Q K+ L S +ISYGPCQ PTLGF VER+++I+ FK E +W + + N
Sbjct: 198 NLQNKFQSLKQSKEIISYGPCQFPTLGFVVERYNQIQLFKEEKFWYIQGSFTWN 251
>gi|70989103|ref|XP_749401.1| DNA topoisomerase III [Aspergillus fumigatus Af293]
gi|66847032|gb|EAL87363.1| DNA topoisomerase III, putative [Aspergillus fumigatus Af293]
gi|159128816|gb|EDP53930.1| DNA topoisomerase III, putative [Aspergillus fumigatus A1163]
Length = 629
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L+ Q DL LISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 194 LQSLQLQRMCADLSNKLISYGSCQFPTLGFVVDRYLRVKNFKPETFW 240
>gi|393217722|gb|EJD03211.1| prokaryotic type I DNA topoisomerase [Fomitiporia mediterranea
MF3/22]
Length = 1081
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+SYGPCQ PTLGF V R+++++ F PE +W + L+L+ +G V
Sbjct: 205 VSYGPCQFPTLGFVVSRYEQVQAFVPEAFWYIYLSLSRSGASV 247
>gi|378729744|gb|EHY56203.1| DNA topoisomerase III [Exophiala dermatitidis NIH/UT8656]
Length = 625
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT-----LNL 63
L+ + Q +L +ISYG CQ PTLGF V+R++++R FKPE +W + L + +
Sbjct: 193 LQSLELQCLSENLRDKMISYGSCQFPTLGFVVDRYNRVRNFKPELFWSIKLVQVRAGIKV 252
Query: 64 NGEW 67
N W
Sbjct: 253 NFNW 256
>gi|407034342|gb|EKE37171.1| DNA topoisomerase domain containing protein [Entamoeba nuttalli
P19]
Length = 840
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ L SLIS+GPCQTPTLGFCV+R +I F +P++ L + +
Sbjct: 196 RFPKLGDSLISFGPCQTPTLGFCVDRQKEIDNFVSKPFYTLKVII 240
>gi|242220541|ref|XP_002476035.1| predicted protein [Postia placenta Mad-698-R]
gi|220724723|gb|EED78746.1| predicted protein [Postia placenta Mad-698-R]
Length = 707
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+ISYGPCQ PTLGF V R++++++F PE +W + L+L+
Sbjct: 194 VISYGPCQFPTLGFVVSRYNQVKSFVPETFWYIYLSLS 231
>gi|67473767|ref|XP_652633.1| DNA topoisomerase III [Entamoeba histolytica HM-1:IMSS]
gi|56469504|gb|EAL47247.1| DNA topoisomerase III, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707795|gb|EMD47388.1| DNA topoisomerasebeta-1, putative [Entamoeba histolytica KU27]
Length = 840
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ L SLIS+GPCQTPTLGFCV+R +I F +P++ L + +
Sbjct: 196 RFPKLGDSLISFGPCQTPTLGFCVDRQKEIDNFVSKPFYTLKVII 240
>gi|405967245|gb|EKC32429.1| DNA topoisomerase 3-alpha [Crassostrea gigas]
Length = 1950
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER+ +++ F PEP+W + +T
Sbjct: 151 LADKLISYGSCQFPTLGFVVERYKQVQAFIPEPFWKIKVT 190
>gi|383854782|ref|XP_003702899.1| PREDICTED: DNA topoisomerase 3-alpha-like [Megachile rotundata]
Length = 1018
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L LISYG CQ PTLGF VER+ + FKPEPYW
Sbjct: 202 LSDMLISYGSCQFPTLGFVVERYLAVERFKPEPYW 236
>gi|296416297|ref|XP_002837817.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633700|emb|CAZ82008.1| unnamed protein product [Tuber melanosporum]
Length = 616
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
LD ++SYG CQ PTLGF V+R+ +++ F PEP+W
Sbjct: 203 LDEQVVSYGSCQFPTLGFVVDRYKRVKNFVPEPFW 237
>gi|156037882|ref|XP_001586668.1| hypothetical protein SS1G_12655 [Sclerotinia sclerotiorum 1980]
gi|154698063|gb|EDN97801.1| hypothetical protein SS1G_12655 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 670
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G L ++SYG CQ PTLGF V+R+ K++ F PEP+W + +T
Sbjct: 203 GPLADKMLSYGSCQFPTLGFVVDRYFKVKNFVPEPFWSIKIT 244
>gi|167393819|ref|XP_001740725.1| DNA topoisomerase 3-beta-1 [Entamoeba dispar SAW760]
gi|165895052|gb|EDR22857.1| DNA topoisomerase 3-beta-1, putative [Entamoeba dispar SAW760]
Length = 840
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ L SLIS+GPCQTPTLGFCV+R +I F +P++ L + L
Sbjct: 196 RFPKLGDSLISFGPCQTPTLGFCVDRQKEIDNFVSKPFYTLKVIL 240
>gi|50288605|ref|XP_446732.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526040|emb|CAG59659.1| unnamed protein product [Candida glabrata]
Length = 650
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
D +ISYG CQ PTLGF V+R ++IR F PE +W + LN+ GE
Sbjct: 219 DMPVISYGTCQFPTLGFVVDRFERIRHFIPEEFWYIQ--LNIKGE 261
>gi|440636754|gb|ELR06673.1| hypothetical protein GMDG_00290 [Geomyces destructans 20631-21]
Length = 659
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G L + ISYG CQ PTLGF V+R+ K++ F PEP+W + +T
Sbjct: 203 GPLGGAKISYGSCQFPTLGFVVDRYLKVQNFVPEPFWSIKVT 244
>gi|443692088|gb|ELT93762.1| hypothetical protein CAPTEDRAFT_193082 [Capitella teleta]
Length = 934
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
L LISYG CQ PTLGF VER+ +++ F PEP+W + ++ +L +
Sbjct: 202 LADQLISYGSCQFPTLGFVVERYKQVQAFIPEPFWKIKVSHDLQDD 247
>gi|451847298|gb|EMD60606.1| hypothetical protein COCSADRAFT_163916 [Cochliobolus sativus
ND90Pr]
Length = 667
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
G+ LISYG CQ PTLGF V+R+ ++R F PEP+W + +
Sbjct: 203 GEERGKLISYGSCQFPTLGFVVDRYLRVRNFVPEPFWYIKV 243
>gi|50556688|ref|XP_505752.1| YALI0F22495p [Yarrowia lipolytica]
gi|49651622|emb|CAG78563.1| YALI0F22495p [Yarrowia lipolytica CLIB122]
Length = 620
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L+ Q K+ L S+ISYG CQ PTLGF V+R+ F PEP+W + L
Sbjct: 188 LQTLHIQRKFAQLSKSVISYGSCQFPTLGFIVDRYLARENFVPEPFWYMTL 238
>gi|295664843|ref|XP_002792973.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278494|gb|EEH34060.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 632
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPE +W++ ++ +G+ V+
Sbjct: 203 GVLEDRIISYGSCQFPTLGFVVDRYFRVKNFKPETFWVIKVSHLRDGKTVN 253
>gi|396493373|ref|XP_003844019.1| hypothetical protein LEMA_P016700.1 [Leptosphaeria maculans JN3]
gi|312220599|emb|CBY00540.1| hypothetical protein LEMA_P016700.1 [Leptosphaeria maculans JN3]
Length = 736
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G+ LISYG CQ PTLGF V+R+ ++R F PE +WL+ L +G
Sbjct: 203 GEERRKLISYGSCQFPTLGFVVDRYLRVRNFVPESFWLIKLAHKKDG 249
>gi|119498155|ref|XP_001265835.1| DNA topoisomerase III, putative [Neosartorya fischeri NRRL 181]
gi|119413999|gb|EAW23938.1| DNA topoisomerase III, putative [Neosartorya fischeri NRRL 181]
Length = 571
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L+ Q DL LISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 136 LQSLQLQRMCADLANKLISYGSCQFPTLGFVVDRYLRVKNFKPETFW 182
>gi|315427545|dbj|BAJ49146.1| DNA topoisomerase III [Candidatus Caldiarchaeum subterraneum]
Length = 608
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+IS+G CQTPTL F VER +I+ FKP+ YW+++ TL
Sbjct: 189 VISWGSCQTPTLNFVVEREKEIQQFKPQKYWVIEATL 225
>gi|315425546|dbj|BAJ47207.1| DNA topoisomerase III [Candidatus Caldiarchaeum subterraneum]
gi|343484402|dbj|BAJ50056.1| DNA topoisomerase III [Candidatus Caldiarchaeum subterraneum]
Length = 606
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+IS+G CQTPTL F VER +I+ FKP+ YW+++ TL
Sbjct: 189 VISWGSCQTPTLNFVVEREKEIQQFKPQKYWVIEATL 225
>gi|327356144|gb|EGE85001.1| DNA topoisomerase [Ajellomyces dermatitidis ATCC 18188]
Length = 630
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GALEDRVISYGSCQFPTLGFVVDRYFRVKNFKPEKFWSIKVSHARDGKTVN 253
>gi|358378931|gb|EHK16612.1| hypothetical protein TRIVIDRAFT_162256 [Trichoderma virens Gv29-8]
Length = 660
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L ++SYG CQ PTLGF V+R+ +++ F PEP+W + L N G+ V
Sbjct: 197 GPLADLVLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGISLMHNKEGKQV 246
>gi|363751663|ref|XP_003646048.1| hypothetical protein Ecym_4154 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889683|gb|AET39231.1| hypothetical protein Ecym_4154 [Eremothecium cymbalariae
DBVPG#7215]
Length = 638
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+LISYG CQ PTLGF V+R+++I+ F E +WLL TL +G
Sbjct: 215 ALISYGTCQFPTLGFVVDRYERIQRFVTEEFWLLQATLEESG 256
>gi|91089373|ref|XP_973578.1| PREDICTED: similar to topoisomerase (DNA) III alpha [Tribolium
castaneum]
gi|270012533|gb|EFA08981.1| hypothetical protein TcasGA2_TC006688 [Tribolium castaneum]
Length = 951
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
LISYG CQ PTLGF VER+ I+ F PEP+W + + +N
Sbjct: 205 LISYGSCQFPTLGFVVERYQAIQDFIPEPFWKIKMNHTVN 244
>gi|449016179|dbj|BAM79581.1| DNA topoisomerase III alpha [Cyanidioschyzon merolae strain 10D]
Length = 784
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
DA+++SYGPCQ PTLG V+R+ + R F+ +P+W + + + G+ S
Sbjct: 245 DAAVVSYGPCQFPTLGLVVDRYRERREFQTKPFWTIRMRIQTTGDRAS 292
>gi|321463458|gb|EFX74474.1| hypothetical protein DAPPUDRAFT_324341 [Daphnia pulex]
Length = 1025
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G L SLISYG CQ PTLGF VER+ I+ F E +W L + LN E
Sbjct: 202 GSLGQSLISYGSCQFPTLGFIVERYKAIQDFVRENFWKLKVVWELNEE 249
>gi|403364238|gb|EJY81876.1| DNA topoisomerase [Oxytricha trifallax]
Length = 955
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++SYGPCQ PTLGF VER IR FK E +W L+L L
Sbjct: 210 VLSYGPCQFPTLGFIVERFKHIRDFKAEKFWQLNLKL 246
>gi|365759377|gb|EHN01167.1| Top3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 601
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
D+ ++SYG CQ PTLGF V+R ++IR F PE +W + L ++
Sbjct: 168 DSQVVSYGTCQFPTLGFVVDRFERIRNFVPEEFWYIQLVVD 208
>gi|448521188|ref|XP_003868447.1| Top3 protein [Candida orthopsilosis Co 90-125]
gi|380352787|emb|CCG25543.1| Top3 protein [Candida orthopsilosis]
Length = 617
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
LL NLK + K + SYG CQ PTLGF V+R+ ++++FKPEP+W ++ L
Sbjct: 189 LLTDNLKSKNIIDK-----KDIASYGTCQFPTLGFVVDRYKRVKSFKPEPFWYIEPML 241
>gi|281201507|gb|EFA75716.1| DNA topoisomerase III [Polysphondylium pallidum PN500]
Length = 1103
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
D ISYGPCQ PTLGF VER +I F PE +W++D++
Sbjct: 531 DDQPISYGPCQFPTLGFVVERALRIERFVPEDFWVIDVS 569
>gi|190405298|gb|EDV08565.1| DNA topoisomerase III [Saccharomyces cerevisiae RM11-1a]
gi|256271738|gb|EEU06775.1| Top3p [Saccharomyces cerevisiae JAY291]
gi|259148217|emb|CAY81464.1| Top3p [Saccharomyces cerevisiae EC1118]
gi|323332349|gb|EGA73758.1| Top3p [Saccharomyces cerevisiae AWRI796]
gi|323336488|gb|EGA77755.1| Top3p [Saccharomyces cerevisiae Vin13]
gi|323347440|gb|EGA81711.1| Top3p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764070|gb|EHN05595.1| Top3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 656
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D+ ++SYG CQ PTLGF V+R ++IR F PE +W + L +
Sbjct: 225 DSQVVSYGTCQFPTLGFVVDRFERIRNFVPEEFWYIQLVV 264
>gi|151941072|gb|EDN59452.1| DNA topoisomerase III [Saccharomyces cerevisiae YJM789]
gi|349579943|dbj|GAA25104.1| K7_Top3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 656
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D+ ++SYG CQ PTLGF V+R ++IR F PE +W + L +
Sbjct: 225 DSQVVSYGTCQFPTLGFVVDRFERIRNFVPEEFWYIQLVV 264
>gi|6323263|ref|NP_013335.1| DNA topoisomerase 3 [Saccharomyces cerevisiae S288c]
gi|136001|sp|P13099.1|TOP3_YEAST RecName: Full=DNA topoisomerase 3; AltName: Full=DNA topoisomerase
III
gi|173002|gb|AAA35161.1| DNA topoisomerase [Saccharomyces cerevisiae]
gi|609366|gb|AAB67406.1| Top3p: DNA Topoisomerase III [Saccharomyces cerevisiae]
gi|285813654|tpg|DAA09550.1| TPA: DNA topoisomerase 3 [Saccharomyces cerevisiae S288c]
gi|392297742|gb|EIW08841.1| Top3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 656
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D+ ++SYG CQ PTLGF V+R ++IR F PE +W + L +
Sbjct: 225 DSQVVSYGTCQFPTLGFVVDRFERIRNFVPEEFWYIQLVV 264
>gi|330914108|ref|XP_003296497.1| hypothetical protein PTT_06616 [Pyrenophora teres f. teres 0-1]
gi|311331314|gb|EFQ95407.1| hypothetical protein PTT_06616 [Pyrenophora teres f. teres 0-1]
Length = 667
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
G+ +ISYG CQ PTLGF V+R+ ++R F PEP+W + +
Sbjct: 203 GEQRGKIISYGSCQFPTLGFVVDRYLRVRNFVPEPFWYIKV 243
>gi|426192057|gb|EKV41995.1| hypothetical protein AGABI2DRAFT_154568 [Agaricus bisporus var.
bisporus H97]
Length = 703
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Q + L ++SYGPCQ PTLGF V+R+++++ F PE +W + L+
Sbjct: 192 QTQVQQLAEKIVSYGPCQFPTLGFAVQRYNQVKNFIPEDFWYIFLS 237
>gi|166240582|ref|XP_643754.2| DNA topoisomerase III [Dictyostelium discoideum AX4]
gi|74818660|sp|Q8T2T7.1|TOP3_DICDI RecName: Full=DNA topoisomerase 3; AltName: Full=DNA topoisomerase
III
gi|165988670|gb|EAL69909.2| DNA topoisomerase III [Dictyostelium discoideum AX4]
Length = 828
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ISYGPCQ PTLGF VER+ +I FKPE +W L +
Sbjct: 232 IISYGPCQFPTLGFVVERYFRIVNFKPEDFWHLSV 266
>gi|403373519|gb|EJY86679.1| DNA topoisomerase [Oxytricha trifallax]
Length = 1033
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L+ ++ G ++SYGPCQ PTLGF VER K+ F+PE YW + +
Sbjct: 142 LQSMKFKDVIGANQKQVLSYGPCQFPTLGFVVERFTKVSKFEPEKYWTITI 192
>gi|325089089|gb|EGC42399.1| DNA topoisomerase III [Ajellomyces capsulatus H88]
Length = 450
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GVLEDRVISYGSCQFPTLGFVVDRYFRVKNFKPEKFWTIKVSHVRDGKTVN 253
>gi|240280657|gb|EER44161.1| DNA topoisomerase III [Ajellomyces capsulatus H143]
Length = 630
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GVLEDRVISYGSCQFPTLGFVVDRYFRVKNFKPEKFWTIKVSHVRDGKTVN 253
>gi|225560799|gb|EEH09080.1| DNA topoisomerase III [Ajellomyces capsulatus G186AR]
Length = 630
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GVLEDRVISYGSCQFPTLGFVVDRYFRVKNFKPEKFWTIKVSHVRDGKTVN 253
>gi|327308726|ref|XP_003239054.1| DNA topoisomerase III [Trichophyton rubrum CBS 118892]
gi|326459310|gb|EGD84763.1| DNA topoisomerase III [Trichophyton rubrum CBS 118892]
Length = 630
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G L +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G
Sbjct: 203 GALAEKIISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDG 249
>gi|302656146|ref|XP_003019829.1| hypothetical protein TRV_06117 [Trichophyton verrucosum HKI 0517]
gi|291183601|gb|EFE39205.1| hypothetical protein TRV_06117 [Trichophyton verrucosum HKI 0517]
Length = 622
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G L +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G
Sbjct: 199 GALAEKIISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDG 245
>gi|207342920|gb|EDZ70541.1| YLR234Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 478
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D+ ++SYG CQ PTLGF V+R ++IR F PE +W + L +
Sbjct: 47 DSQVVSYGTCQFPTLGFVVDRFERIRNFVPEEFWYIQLVV 86
>gi|409075215|gb|EKM75598.1| hypothetical protein AGABI1DRAFT_46203 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 852
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Q + L ++SYGPCQ PTLGF V+R+++++ F PE +W + L+
Sbjct: 192 QTQVQQLAEKIVSYGPCQFPTLGFAVQRYNQVKNFIPEDFWYIFLS 237
>gi|403369401|gb|EJY84543.1| DNA topoisomerase [Oxytricha trifallax]
Length = 894
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
++SYGPCQ PTLGF VER +KI+ FK E W L+L + N
Sbjct: 155 ILSYGPCQFPTLGFVVERANKIKNFKSEITWRLELVHSYN 194
>gi|328871269|gb|EGG19640.1| DNA topoisomerase III [Dictyostelium fasciculatum]
Length = 812
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT-----LNLNGEW 67
D D ISYGPCQ PTLGF VER+ +I F PE +W +++ L +N W
Sbjct: 231 DEDKQPISYGPCQFPTLGFVVERYLRIENFIPEDFWSMNVKHSKEELTVNFGW 283
>gi|327293864|ref|XP_003231628.1| DNA topoisomerase III [Trichophyton rubrum CBS 118892]
gi|326466256|gb|EGD91709.1| DNA topoisomerase III [Trichophyton rubrum CBS 118892]
Length = 632
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
LISYG CQ PTLGF ER+ ++R F PEP+W + L
Sbjct: 161 LISYGSCQFPTLGFIAERYWRVRNFIPEPFWSIKL 195
>gi|326477792|gb|EGE01802.1| DNA topoisomerase III [Trichophyton equinum CBS 127.97]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G L +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G
Sbjct: 203 GALAERIISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDG 249
>gi|326474803|gb|EGD98812.1| DNA topoisomerase III [Trichophyton tonsurans CBS 112818]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G L +ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G
Sbjct: 203 GALAERIISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDG 249
>gi|189188224|ref|XP_001930451.1| DNA topoisomerase 3-beta [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972057|gb|EDU39556.1| DNA topoisomerase 3-beta [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 665
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
G+ +ISYG CQ PTLGF V+R+ ++R F PEP+W + +
Sbjct: 203 GEERGKVISYGSCQFPTLGFVVDRYLRVRNFVPEPFWYIKV 243
>gi|425769433|gb|EKV07926.1| DNA topoisomerase [Penicillium digitatum Pd1]
gi|425771095|gb|EKV09549.1| DNA topoisomerase [Penicillium digitatum PHI26]
Length = 571
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L+ Q L +ISYG CQ PTLGF V+R+ +++ FKPE +W + + L+ G+ V
Sbjct: 136 LQTLQLQTVVAALKEKVISYGSCQFPTLGFVVDRYLRVQNFKPETFWGIKVILSREGKKV 195
Query: 69 S 69
+
Sbjct: 196 N 196
>gi|255943201|ref|XP_002562369.1| Pc18g05420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587102|emb|CAP94766.1| Pc18g05420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 628
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L+ Q L +ISYG CQ PTLGF V+R+ +++ FKPE +W + + L+ G+ V
Sbjct: 193 LQTLQLQTVVAALKEKVISYGSCQFPTLGFVVDRYLRVQNFKPETFWGIKVILSREGKKV 252
Query: 69 S 69
+
Sbjct: 253 N 253
>gi|255726540|ref|XP_002548196.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134120|gb|EER33675.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 619
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
SYG CQ PTLGF V+R+ +++ FKPEP+W +++
Sbjct: 208 SYGTCQFPTLGFVVDRYKRVKRFKPEPFWYIEV 240
>gi|302916113|ref|XP_003051867.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732806|gb|EEU46154.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 653
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G ++ +SYG CQ PTLGF V+R+ +++ F PEP+W + + N G+ V
Sbjct: 197 GPMEKLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKVMHNREGKKV 246
>gi|19113553|ref|NP_596761.1| DNA topoisomerase III [Schizosaccharomyces pombe 972h-]
gi|6686026|sp|O60126.2|TOP3_SCHPO RecName: Full=DNA topoisomerase 3; AltName: Full=DNA topoisomerase
III
gi|4388617|emb|CAA19038.1| DNA topoisomerase III [Schizosaccharomyces pombe]
gi|5836087|gb|AAD22485.2| topoisomerase 3 [Schizosaccharomyces pombe]
Length = 622
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
L+ Q + L +ISYGPCQ PTLGF V+R ++ F PE YW L
Sbjct: 190 LQTIQLQKSFDILQNKIISYGPCQFPTLGFVVDRWQRVEDFVPETYWHL 238
>gi|403222791|dbj|BAM40922.1| DNA topoisomerase III [Theileria orientalis strain Shintoku]
Length = 619
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
A ++SYG CQ PTLGF VER+ +I F+ EPYW T+N+N
Sbjct: 191 AKILSYGTCQLPTLGFVVERYLQIENFQREPYW----TINVN 228
>gi|68465569|ref|XP_723146.1| likely DNA topoisomerase III [Candida albicans SC5314]
gi|68465862|ref|XP_722999.1| likely DNA topoisomerase III [Candida albicans SC5314]
gi|46445011|gb|EAL04282.1| likely DNA topoisomerase III [Candida albicans SC5314]
gi|46445167|gb|EAL04437.1| likely DNA topoisomerase III [Candida albicans SC5314]
Length = 629
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L SYG CQ PTLGF V+R+ ++++F PEP+W +++
Sbjct: 206 LASYGTCQFPTLGFVVDRYKRVKSFTPEPFWYIEI 240
>gi|238880879|gb|EEQ44517.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 629
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L SYG CQ PTLGF V+R+ ++++F PEP+W +++
Sbjct: 206 LASYGTCQFPTLGFVVDRYKRVKSFTPEPFWYIEI 240
>gi|427782477|gb|JAA56690.1| Putative dna topoisomerase iii beta [Rhipicephalus pulchellus]
Length = 669
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+L L+SYG CQ PTLGF VER+ I F PEP+W +++ + +G
Sbjct: 201 ELGDRLVSYGSCQFPTLGFVVERYRAILNFVPEPFWKIEMNHSKDG 246
>gi|296814980|ref|XP_002847827.1| DNA topoisomerase III [Arthroderma otae CBS 113480]
gi|238840852|gb|EEQ30514.1| DNA topoisomerase III [Arthroderma otae CBS 113480]
Length = 631
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL-----TLNL 63
L+ Q G L +ISYG CQ PTLGF V+R+ +++ FKPE +W + + ++ +
Sbjct: 203 LQTLQLQALGGVLAEKIISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDSITV 262
Query: 64 NGEW 67
N W
Sbjct: 263 NFNW 266
>gi|350420688|ref|XP_003492591.1| PREDICTED: DNA topoisomerase 3-alpha-like [Bombus impatiens]
Length = 1012
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW---LLDLTLNLNGEW 67
LISYG CQ PTLGF VER I+ FK EPYW ++D+ N++ E+
Sbjct: 206 LISYGSCQFPTLGFVVERFLAIKRFKSEPYWKIKVMDIRDNISVEF 251
>gi|340724036|ref|XP_003400391.1| PREDICTED: DNA topoisomerase 3-alpha-like [Bombus terrestris]
Length = 1043
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW---LLDLTLNLNGEW 67
LISYG CQ PTLGF VER I+ FK EPYW ++D+ N++ E+
Sbjct: 239 LISYGSCQFPTLGFVVERFLAIKRFKSEPYWKIKVMDIRDNISVEF 284
>gi|298709983|emb|CBJ31703.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 759
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++ +L +ISYGPCQ PTLGF V+R+ +I+ F+ E +W + +
Sbjct: 4 RFDELQEGVISYGPCQFPTLGFIVDRYKRIQAFQSEAFWSIKM 46
>gi|342885903|gb|EGU85855.1| hypothetical protein FOXB_03703 [Fusarium oxysporum Fo5176]
Length = 656
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G ++ +SYG CQ PTLGF V+R+ +++ F PEP+W + L +G+ V
Sbjct: 200 GPMEKLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKLMHTRDGKKV 249
>gi|336469613|gb|EGO57775.1| hypothetical protein NEUTE1DRAFT_81659 [Neurospora tetrasperma FGSC
2508]
Length = 662
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G DL L+SYG CQ PTLGF V+R+ ++R F PEP+W
Sbjct: 201 GAMADL---LLSYGSCQFPTLGFVVDRYFRVRNFVPEPFW 237
>gi|340376735|ref|XP_003386887.1| PREDICTED: DNA topoisomerase 3-alpha-like [Amphimedon
queenslandica]
Length = 981
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
L L+SYGPCQ PTLGF V+R+ +I+ F PE ++ + +T + E VS
Sbjct: 209 LSDQLVSYGPCQFPTLGFVVDRYKEIQAFVPETFYKITVTHQASNENVS 257
>gi|350290740|gb|EGZ71954.1| prokaryotic type I DNA topoisomerase [Neurospora tetrasperma FGSC
2509]
Length = 654
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G DL L+SYG CQ PTLGF V+R+ ++R F PEP+W
Sbjct: 193 GAMADL---LLSYGSCQFPTLGFVVDRYFRVRNFVPEPFW 229
>gi|401624635|gb|EJS42690.1| top3p [Saccharomyces arboricola H-6]
Length = 655
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
D+ ++SYG CQ PTLGF V+R ++IR F E +W + LT++
Sbjct: 225 DSQVVSYGTCQFPTLGFVVDRFERIRNFIAEEFWYIQLTVD 265
>gi|320166036|gb|EFW42935.1| topoisomerase III [Capsaspora owczarzaki ATCC 30864]
Length = 874
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
S+ISYGPCQ PTLGF V+R+ +++ F PE +W +
Sbjct: 155 SVISYGPCQFPTLGFIVDRYRRVKAFVPEEFWTI 188
>gi|241594082|ref|XP_002404244.1| DNA topoisomerase III, putative [Ixodes scapularis]
gi|215502316|gb|EEC11810.1| DNA topoisomerase III, putative [Ixodes scapularis]
Length = 670
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L L+SYG CQ PTLGF VER+ +I F PEP+W + LT
Sbjct: 248 LHDRLVSYGSCQFPTLGFVVERYRQILNFVPEPFWKIHLT 287
>gi|440475801|gb|ELQ44463.1| DNA topoisomerase 3 [Magnaporthe oryzae Y34]
gi|440487000|gb|ELQ66814.1| DNA topoisomerase 3 [Magnaporthe oryzae P131]
Length = 710
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L +NL+ + G L ++SYG CQ PTLGF V+R+ +++ F PE +W + L++
Sbjct: 191 FLTINLRSLN-----GPLKDLVLSYGSCQFPTLGFVVDRYFRVKNFVPETFWSIKLSIKK 245
Query: 64 NGE 66
+G+
Sbjct: 246 DGK 248
>gi|389632279|ref|XP_003713792.1| DNA topoisomerase III [Magnaporthe oryzae 70-15]
gi|351646125|gb|EHA53985.1| DNA topoisomerase III [Magnaporthe oryzae 70-15]
Length = 669
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L +NL+ + G L ++SYG CQ PTLGF V+R+ +++ F PE +W + L++
Sbjct: 191 FLTINLRSLN-----GPLKDLVLSYGSCQFPTLGFVVDRYFRVKNFVPETFWSIKLSIKK 245
Query: 64 NGE 66
+G+
Sbjct: 246 DGK 248
>gi|400597476|gb|EJP65209.1| DNA topoisomerase [Beauveria bassiana ARSEF 2860]
Length = 667
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G ++ +SYG CQ PTLGF V+R+ +++ F PEP+W + +T + G+
Sbjct: 200 GPMENLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGIKVTHSREGK 247
>gi|302497521|ref|XP_003010761.1| hypothetical protein ARB_03463 [Arthroderma benhamiae CBS 112371]
gi|291174304|gb|EFE30121.1| hypothetical protein ARB_03463 [Arthroderma benhamiae CBS 112371]
Length = 473
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G L ISYG CQ PTLGF V+R+ +++ FKPE +W + ++ +G
Sbjct: 66 GALAERTISYGSCQFPTLGFVVDRYMRVKNFKPEAFWSIKVSHTRDG 112
>gi|290980003|ref|XP_002672722.1| predicted protein [Naegleria gruberi]
gi|284086301|gb|EFC39978.1| predicted protein [Naegleria gruberi]
Length = 1015
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
K+ + A ISYGPCQ PTLGF V+R I+ F+ E +W L+ T ++ E
Sbjct: 224 KFQGITADYISYGPCQFPTLGFVVKRDLIIKNFESESFWTLNCTHDMGEE 273
>gi|453089198|gb|EMF17238.1| DNA topoisomerase [Mycosphaerella populorum SO2202]
Length = 679
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+ISYG CQ PTLGF VER+ ++R F PE +W + +T
Sbjct: 215 IISYGSCQFPTLGFVVERYMRVRNFVPETFWSIKVT 250
>gi|255716548|ref|XP_002554555.1| KLTH0F08118p [Lachancea thermotolerans]
gi|238935938|emb|CAR24118.1| KLTH0F08118p [Lachancea thermotolerans CBS 6340]
Length = 627
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ISYG CQ PTLGF V+R ++IR F PE +W + +++ + E
Sbjct: 213 IISYGTCQFPTLGFVVDRFERIRKFVPEKFWFIQISIPNDSE 254
>gi|397627399|gb|EJK68461.1| hypothetical protein THAOC_10357, partial [Thalassiosira oceanica]
Length = 1051
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+ISYGPCQTP L FC++R +I F P+ YW L + +
Sbjct: 516 MISYGPCQTPALSFCIDRMREIEGFTPQVYWKLSCSAKM 554
>gi|346327587|gb|EGX97183.1| DNA topoisomerase III [Cordyceps militaris CM01]
Length = 612
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G ++ +SYG CQ PTLGF V+R+ +++ F PEP+W + +T
Sbjct: 146 GPMENLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKVT 187
>gi|414864982|tpg|DAA43539.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
Length = 329
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD + ++SYGPCQ PTLGF VER +I+ +PE +W ++ T
Sbjct: 201 LKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCT 252
>gi|258568124|ref|XP_002584806.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906252|gb|EEP80653.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 587
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 19 GDLDASLISY--GPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G L LISY G CQ PTLGF V+R+ +++ FKPEP+W + ++
Sbjct: 176 GALAERLISYALGSCQFPTLGFVVDRYFRVKNFKPEPFWSIKVS 219
>gi|332019151|gb|EGI59663.1| DNA topoisomerase 3-alpha [Acromyrmex echinatior]
Length = 1005
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
GDL LISYG CQ PTLGF VER I FK EPYW L +
Sbjct: 153 GDL---LISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLKV 190
>gi|67536770|ref|XP_662159.1| hypothetical protein AN4555.2 [Aspergillus nidulans FGSC A4]
gi|40741708|gb|EAA60898.1| hypothetical protein AN4555.2 [Aspergillus nidulans FGSC A4]
gi|259482615|tpe|CBF77265.1| TPA: DNA topoisomerase III (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 629
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
LL L L Q + L +ISYG CQ PTLGF V+R+ +++ FKPE +W + +
Sbjct: 194 LLTLQL-----QNLHATLTQKVISYGSCQFPTLGFVVDRYLRVKRFKPETFWGIKVMHTR 248
Query: 64 NGEWVS 69
+G VS
Sbjct: 249 DGIKVS 254
>gi|354545471|emb|CCE42199.1| hypothetical protein CPAR2_807480 [Candida parapsilosis]
Length = 615
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+ SYG CQ PTLGF V+R+ +++ FKPEP+W ++
Sbjct: 205 IASYGTCQFPTLGFVVDRYKRVKNFKPEPFWYIE 238
>gi|115386112|ref|XP_001209597.1| DNA topoisomerase III [Aspergillus terreus NIH2624]
gi|114190595|gb|EAU32295.1| DNA topoisomerase III [Aspergillus terreus NIH2624]
Length = 588
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L +LISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 148 LADTLISYGSCQFPTLGFVVDRYLRVKNFKPETFW 182
>gi|390601900|gb|EIN11293.1| prokaryotic type I DNA topoisomerase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 708
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+SYGPCQ PTLGF V R+ +++ F PE +W + L G+
Sbjct: 199 VSYGPCQFPTLGFVVARYKQVKAFVPETFWYIYFALRREGD 239
>gi|414864981|tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
Length = 915
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD + ++SYGPCQ PTLGF VER +I+ +PE +W ++ T
Sbjct: 201 LKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCT 252
>gi|358368744|dbj|GAA85360.1| DNA topoisomerase III [Aspergillus kawachii IFO 4308]
Length = 629
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L ++ISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 206 LQDTIISYGSCQFPTLGFVVDRYLRVKNFKPETFW 240
>gi|350635779|gb|EHA24140.1| hypothetical protein ASPNIDRAFT_48367 [Aspergillus niger ATCC 1015]
Length = 629
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L ++ISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 206 LQDTIISYGSCQFPTLGFVVDRYLRVKNFKPETFW 240
>gi|145238250|ref|XP_001391772.1| DNA topoisomerase 3 [Aspergillus niger CBS 513.88]
gi|134076254|emb|CAK39540.1| unnamed protein product [Aspergillus niger]
Length = 629
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L ++ISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 206 LQDTIISYGSCQFPTLGFVVDRYLRVKNFKPETFW 240
>gi|307596564|ref|YP_003902881.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
gi|307551765|gb|ADN51830.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
Length = 618
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
S +SYGPCQTP L V+R + FKPE Y+ L + +N+NG V+
Sbjct: 200 GSFLSYGPCQTPVLNLVVQRALERENFKPEKYYTLHIIVNVNGVRVT 246
>gi|367016122|ref|XP_003682560.1| hypothetical protein TDEL_0F05380 [Torulaspora delbrueckii]
gi|359750222|emb|CCE93349.1| hypothetical protein TDEL_0F05380 [Torulaspora delbrueckii]
Length = 652
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D+++ISYG CQ PTLGF V+R ++IR F E +W + L +
Sbjct: 225 DSTVISYGTCQFPTLGFVVDRFERIRNFVSEEFWYIQLQV 264
>gi|401409598|ref|XP_003884247.1| putative DNA topoisomerase III alpha [Neospora caninum Liverpool]
gi|325118665|emb|CBZ54216.1| putative DNA topoisomerase III alpha [Neospora caninum Liverpool]
Length = 870
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L + ISYGPCQ+PTLGF V R ++ F E YW + +T+N
Sbjct: 203 LPSPTISYGPCQSPTLGFVVSRFVEVENFVREAYWTIRVTIN 244
>gi|367006322|ref|XP_003687892.1| hypothetical protein TPHA_0L01010 [Tetrapisispora phaffii CBS 4417]
gi|357526198|emb|CCE65458.1| hypothetical protein TPHA_0L01010 [Tetrapisispora phaffii CBS 4417]
Length = 651
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ISYG CQ PTLGF V+R ++IR F PE +W + L +
Sbjct: 221 VISYGTCQFPTLGFVVDRFERIRNFIPEEFWYIQLQI 257
>gi|322801677|gb|EFZ22300.1| hypothetical protein SINV_07705 [Solenopsis invicta]
Length = 1052
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 27/41 (65%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
LISYG CQ PTLGF VER I FK EPYW L + + +G
Sbjct: 206 LISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLRIIDDRDG 246
>gi|392593523|gb|EIW82848.1| prokaryotic type I DNA topoisomerase [Coniophora puteana RWD-64-598
SS2]
Length = 717
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++SYGPCQ PTLGF V R+ + R F EP+W + L L
Sbjct: 200 VVSYGPCQFPTLGFVVARYCEARAFTEEPFWYITLLL 236
>gi|164428822|ref|XP_956391.2| hypothetical protein NCU00081 [Neurospora crassa OR74A]
gi|157072295|gb|EAA27155.2| hypothetical protein NCU00081 [Neurospora crassa OR74A]
Length = 638
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G DL ++SYG CQ PTLGF V+R+ ++R F PEP+W
Sbjct: 172 GAMADL---VLSYGSCQFPTLGFVVDRYFRVRNFVPEPFW 208
>gi|297793983|ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
lyrata]
gi|297310711|gb|EFH41135.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
lyrata]
Length = 923
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G+ + +ISYGPCQ PTLGF VER+ +I+ +PE +W ++ +
Sbjct: 211 GEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFWTINCS 252
>gi|15237561|ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana]
gi|8777305|dbj|BAA96895.1| DNA topoisomerase III [Arabidopsis thaliana]
gi|169218912|gb|ACA50279.1| topoisomerase 3 alpha [Arabidopsis thaliana]
gi|332010433|gb|AED97816.1| DNA topoisomerase III [Arabidopsis thaliana]
Length = 926
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G+ + +ISYGPCQ PTLGF VER+ +I+ +PE +W ++ +
Sbjct: 211 GEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFWTINCS 252
>gi|344301281|gb|EGW31593.1| DNA topoisomerase [Spathaspora passalidarum NRRL Y-27907]
Length = 613
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
SYG CQ PTLGF V+R+ ++++F PE +W +D+ + +G
Sbjct: 207 SYGTCQFPTLGFIVDRYKRVKSFVPEAFWFIDVEVMKDG 245
>gi|328710041|ref|XP_001950527.2| PREDICTED: DNA topoisomerase 3-alpha-like [Acyrthosiphon pisum]
Length = 915
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L SLISYG CQ PTLGF VER+ I+ F PE +W
Sbjct: 234 LAKSLISYGSCQFPTLGFVVERYKDIQNFIPENFW 268
>gi|284043264|ref|YP_003393604.1| DNA topoisomerase III [Conexibacter woesei DSM 14684]
gi|283947485|gb|ADB50229.1| DNA topoisomerase III [Conexibacter woesei DSM 14684]
Length = 754
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+S G QTPTL R ++IR F+PEPYW +D T +GE V
Sbjct: 192 VSLGRVQTPTLAILARREEEIRAFRPEPYWTVDATFAASGERV 234
>gi|156836960|ref|XP_001642518.1| hypothetical protein Kpol_340p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113057|gb|EDO14660.1| hypothetical protein Kpol_340p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 650
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ISYG CQ PTLGF V+R+++IR F PE +W + L +
Sbjct: 222 VISYGTCQFPTLGFVVDRYERIRHFIPEEFWHIQLQI 258
>gi|340959518|gb|EGS20699.1| DNA topoisomerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 625
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L LNL+ G + ISYG CQ PTLGF V+R+ +++ F PEP+W + +
Sbjct: 191 FLTLNLRTLG-----GPMSQLTISYGSCQFPTLGFVVDRYFRVKNFIPEPFWSIKVMHER 245
Query: 64 NG 65
+G
Sbjct: 246 DG 247
>gi|448115381|ref|XP_004202802.1| Piso0_001663 [Millerozyma farinosa CBS 7064]
gi|359383670|emb|CCE79586.1| Piso0_001663 [Millerozyma farinosa CBS 7064]
Length = 620
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
ISYG CQ PTLGF V+R+++++ F PE +W + +T+
Sbjct: 207 FISYGTCQFPTLGFVVDRYNRVKRFIPEKFWYISITV 243
>gi|448112756|ref|XP_004202179.1| Piso0_001663 [Millerozyma farinosa CBS 7064]
gi|359465168|emb|CCE88873.1| Piso0_001663 [Millerozyma farinosa CBS 7064]
Length = 620
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
ISYG CQ PTLGF V+R+++++ F PE +W + +T+
Sbjct: 207 FISYGTCQFPTLGFVVDRYNRVKRFIPEKFWYISITV 243
>gi|158299059|ref|XP_319175.3| AGAP010028-PA [Anopheles gambiae str. PEST]
gi|157014186|gb|EAA13910.3| AGAP010028-PA [Anopheles gambiae str. PEST]
Length = 1025
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
D+ +L+SYG CQ PTLGF +R+ +I F P+ +W + LT
Sbjct: 228 DISNNLVSYGSCQIPTLGFVAQRYKEIENFIPQTFWKIKLT 268
>gi|171686712|ref|XP_001908297.1| hypothetical protein [Podospora anserina S mat+]
gi|170943317|emb|CAP68970.1| unnamed protein product [Podospora anserina S mat+]
Length = 751
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 13 DYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+ +G G + +ISYG CQ PTLGF V+R+ +++ F PE +W + L G VS
Sbjct: 280 NLRGLGGPMGELMISYGSCQFPTLGFVVDRYFRVKNFVPEAFWSIKLVHEREGMKVS 336
>gi|328786138|ref|XP_394050.4| PREDICTED: DNA topoisomerase 3-alpha-like [Apis mellifera]
Length = 1012
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW---LLDLTLNLNGEW 67
LISYG CQ PTLGF VER I FK EPYW ++D+ N++ E+
Sbjct: 206 LISYGSCQFPTLGFVVERFLAIEEFKIEPYWKIKVMDIRDNISVEF 251
>gi|449437640|ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
Length = 925
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
++SYGPCQ PTLGF VER+ +I++ +PE +W ++ + N
Sbjct: 216 VLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCSHN 253
>gi|169775139|ref|XP_001822037.1| DNA topoisomerase 3 [Aspergillus oryzae RIB40]
gi|238496239|ref|XP_002379355.1| DNA topoisomerase III, putative [Aspergillus flavus NRRL3357]
gi|83769900|dbj|BAE60035.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694235|gb|EED50579.1| DNA topoisomerase III, putative [Aspergillus flavus NRRL3357]
gi|391872962|gb|EIT82037.1| DNA topoisomerase III alpha [Aspergillus oryzae 3.042]
Length = 629
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L +ISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 206 LSEKIISYGSCQFPTLGFVVDRYLRVKNFKPENFW 240
>gi|242014828|ref|XP_002428087.1| DNA topoisomerase 3-alpha, putative [Pediculus humanus corporis]
gi|212512606|gb|EEB15349.1| DNA topoisomerase 3-alpha, putative [Pediculus humanus corporis]
Length = 901
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 15 QGKYGD-LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
Q K+ D ++++SYG CQ PTLGF VER I F EP+W +++ N N
Sbjct: 194 QKKFPDNFKSTVVSYGSCQFPTLGFVVERFKNISQFISEPFWRIEVKDNSN 244
>gi|398398505|ref|XP_003852710.1| DNA topoisomerase 3 [Zymoseptoria tritici IPO323]
gi|339472591|gb|EGP87686.1| hypothetical protein MYCGRDRAFT_71866 [Zymoseptoria tritici IPO323]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+ S+ISYG CQ PTLGF VER+ +++ F PE +W
Sbjct: 209 EGSVISYGSCQFPTLGFVVERYFRVKNFLPETFW 242
>gi|224083488|ref|XP_002307047.1| predicted protein [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| predicted protein [Populus trichocarpa]
Length = 910
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 29/36 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++SYGPCQ PTLGF VER+ +I++ +PE +W ++ T
Sbjct: 210 VLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCT 245
>gi|195031343|ref|XP_001988332.1| GH11108 [Drosophila grimshawi]
gi|193904332|gb|EDW03199.1| GH11108 [Drosophila grimshawi]
Length = 1269
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
+LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 204 NLISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIRVLHTIEDLTVEFN 251
>gi|307201913|gb|EFN81542.1| DNA topoisomerase 3-alpha [Harpegnathos saltator]
Length = 1049
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L LISYG CQ PTLGF VER I FK EPYW + + +G +V
Sbjct: 202 LSNMLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKIKVIDEHDGIFV 249
>gi|407924030|gb|EKG17090.1| DNA topoisomerase type IA [Macrophomina phaseolina MS6]
Length = 671
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+ISYG CQ PTLGF V+R+ +++ F PEP+W
Sbjct: 206 VISYGSCQFPTLGFVVDRYFRVKNFVPEPFW 236
>gi|254565565|ref|XP_002489893.1| DNA Topoisomerase III, conserved protein that functions in a
complex with Sgs1p and Rmi1p [Komagataella pastoris
GS115]
gi|238029689|emb|CAY67612.1| DNA Topoisomerase III, conserved protein that functions in a
complex with Sgs1p and Rmi1p [Komagataella pastoris
GS115]
gi|328350304|emb|CCA36704.1| DNA topoisomerase III [Komagataella pastoris CBS 7435]
Length = 628
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+ DL K N +E + + LISYG CQ PTLGF V+R+ +++ F PE +W + +
Sbjct: 194 LTDLFKTNFQEIKEERR-------LISYGGCQFPTLGFVVDRYMRVKEFVPEEFWYISIE 246
Query: 61 L 61
+
Sbjct: 247 V 247
>gi|198413663|ref|XP_002126376.1| PREDICTED: similar to topoisomerase (DNA) III alpha, partial [Ciona
intestinalis]
Length = 571
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER+ F+PE +W +++T
Sbjct: 208 LSDKLISYGSCQFPTLGFVVERYKAREQFQPEDFWKIEVT 247
>gi|449521062|ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
Length = 607
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
++SYGPCQ PTLGF VER+ +I++ +PE +W ++ + N
Sbjct: 216 VLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCSHN 253
>gi|429861174|gb|ELA35874.1| DNA topoisomerase [Colletotrichum gloeosporioides Nara gc5]
Length = 673
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G L ISYG CQ PTLGF V+R+ +++ F PE +W + + N G+
Sbjct: 200 GALQEKTISYGSCQFPTLGFVVDRYFRVQNFVPEQFWSIKVMHNREGK 247
>gi|242036831|ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
gi|241919664|gb|EER92808.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
Length = 860
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ T
Sbjct: 201 LKDAFVINVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCT 252
>gi|121710650|ref|XP_001272941.1| DNA topoisomerase III, putative [Aspergillus clavatus NRRL 1]
gi|119401091|gb|EAW11515.1| DNA topoisomerase III, putative [Aspergillus clavatus NRRL 1]
Length = 629
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L +ISYG CQ PTLGF V+R+ +++ FKPE +W
Sbjct: 206 LTDKIISYGSCQFPTLGFVVDRYLRVKNFKPETFW 240
>gi|195119033|ref|XP_002004036.1| GI18230 [Drosophila mojavensis]
gi|193914611|gb|EDW13478.1| GI18230 [Drosophila mojavensis]
Length = 1279
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIRVLHTIEDLTVEFN 251
>gi|367027160|ref|XP_003662864.1| hypothetical protein MYCTH_2303986 [Myceliophthora thermophila ATCC
42464]
gi|347010133|gb|AEO57619.1| hypothetical protein MYCTH_2303986 [Myceliophthora thermophila ATCC
42464]
Length = 668
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L LNL+ G L +SYG CQ PTLGF V+R+ +++ F PEP+W
Sbjct: 191 FLTLNLRPLG-----GPLSNLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFW 237
>gi|307184421|gb|EFN70830.1| DNA topoisomerase 3-alpha [Camponotus floridanus]
Length = 1044
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
GD+ LISYG CQ PTLGF VER I FK EPYW
Sbjct: 203 GDM---LISYGSCQFPTLGFVVERFLAIDRFKSEPYW 236
>gi|406606993|emb|CCH41611.1| DNA topoisomerase III [Wickerhamomyces ciferrii]
Length = 623
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++SYG CQ PT+GF V+R +I+ F PE +W LD+++
Sbjct: 207 VVSYGSCQFPTVGFVVDRFKRIKNFVPEEFWYLDISV 243
>gi|213410242|ref|XP_002175891.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
gi|212003938|gb|EEB09598.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
Length = 621
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
Q + L +ISYGPCQ PTLGF V+R ++ F PE +W + L
Sbjct: 196 QKAFEILKKRVISYGPCQFPTLGFVVDRWQRVEDFLPEQFWSIKL 240
>gi|195397674|ref|XP_002057453.1| GJ18138 [Drosophila virilis]
gi|194141107|gb|EDW57526.1| GJ18138 [Drosophila virilis]
Length = 1355
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIRVLHTIEDLTVEFN 251
>gi|218201738|gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
Length = 897
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 204 LKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 255
>gi|344229989|gb|EGV61874.1| hypothetical protein CANTEDRAFT_108430 [Candida tenuis ATCC 10573]
Length = 616
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++SYG CQ PTLGF V+R+ +++ F PE +W + ++ + + VS
Sbjct: 205 IVSYGTCQFPTLGFVVDRYKRVKNFVPEKFWYISTSVEKSNQTVS 249
>gi|301092946|ref|XP_002997323.1| DNA topoisomerase, putative [Phytophthora infestans T30-4]
gi|262110843|gb|EEY68895.1| DNA topoisomerase, putative [Phytophthora infestans T30-4]
Length = 907
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+ ++ISYGPCQ PTLGF VER KIR F+ E ++ + +T
Sbjct: 207 EKNVISYGPCQFPTLGFVVERFLKIRNFEREAFYYISVT 245
>gi|241953321|ref|XP_002419382.1| DNA topoisomerase III, putative [Candida dubliniensis CD36]
gi|223642722|emb|CAX42976.1| DNA topoisomerase III, putative [Candida dubliniensis CD36]
Length = 630
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 19 GDLDASLI-SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
G +D + + SYG CQ PTLGF V+R+ +++ F PEP+W +++
Sbjct: 199 GIIDGTQVASYGTCQFPTLGFVVDRYKRVKNFIPEPFWHIEV 240
>gi|198473327|ref|XP_001356254.2| GA10090 [Drosophila pseudoobscura pseudoobscura]
gi|198139406|gb|EAL33317.2| GA10090 [Drosophila pseudoobscura pseudoobscura]
Length = 1178
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIRVLHTIEDLTVEFN 251
>gi|195164694|ref|XP_002023181.1| GL21219 [Drosophila persimilis]
gi|194105266|gb|EDW27309.1| GL21219 [Drosophila persimilis]
Length = 1178
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIRVLHTIEDLTVEFN 251
>gi|218192151|gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
Length = 981
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 302 LKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 353
>gi|124513658|ref|XP_001350185.1| DNA topoisomerase III, putative [Plasmodium falciparum 3D7]
gi|23615602|emb|CAD52594.1| DNA topoisomerase III, putative [Plasmodium falciparum 3D7]
Length = 710
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+ S+ISYGPCQ PTLGF V R+ I+ FK E YW + + N + ++
Sbjct: 203 ETSIISYGPCQFPTLGFVVNRYLDIKNFKNEYYWSIKMKYVYNNDEIN 250
>gi|297721829|ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa Japonica Group]
Length = 928
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 204 LKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 255
>gi|222624247|gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
Length = 983
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 302 LKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 353
>gi|357464743|ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula]
gi|355491701|gb|AES72904.1| DNA topoisomerase [Medicago truncatula]
Length = 587
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+++SYGPCQ PTLGF VER+ +I+ +PE +WL+
Sbjct: 214 TVLSYGPCQFPTLGFVVERYWEIQAHEPEEFWLI 247
>gi|406867141|gb|EKD20180.1| DNA topoisomerase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 671
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+ISYG CQ PTLGF V+R+ ++R F PE +W + +T
Sbjct: 217 VISYGSCQFPTLGFVVDRYFRVRNFVPETFWSIKVT 252
>gi|20219039|gb|AAM15783.1|AC104428_4 Putative DNA topoisomerase III [Oryza sativa Japonica Group]
gi|108706350|gb|ABF94145.1| DNA topoisomerase family protein, expressed [Oryza sativa Japonica
Group]
Length = 912
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A GD ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 302 LKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 353
>gi|313245530|emb|CBY40233.1| unnamed protein product [Oikopleura dioica]
Length = 914
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
Q ++ L + L+S+G CQ PTLGF VER I F+PE +W +++
Sbjct: 194 QRRFPALASRLVSFGSCQFPTLGFVVERWRSIEEFQPEKFWKIEV 238
>gi|313216789|emb|CBY38031.1| unnamed protein product [Oikopleura dioica]
gi|313233526|emb|CBY09698.1| unnamed protein product [Oikopleura dioica]
Length = 933
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
Q ++ L + L+S+G CQ PTLGF VER I F+PE +W +++
Sbjct: 194 QRRFPALASRLVSFGSCQFPTLGFVVERWRSIEEFQPEKFWKIEV 238
>gi|313212908|emb|CBY36814.1| unnamed protein product [Oikopleura dioica]
Length = 929
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
Q ++ L + L+S+G CQ PTLGF VER I F+PE +W +++
Sbjct: 194 QRRFPALASRLVSFGSCQFPTLGFVVERWRSIEEFQPEKFWKIEV 238
>gi|195484485|ref|XP_002090715.1| GE13263 [Drosophila yakuba]
gi|194176816|gb|EDW90427.1| GE13263 [Drosophila yakuba]
Length = 1229
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIKVLHTIDDLTVEFN 251
>gi|340349339|ref|ZP_08672359.1| DNA topoisomerase TopB [Prevotella nigrescens ATCC 33563]
gi|339612076|gb|EGQ16891.1| DNA topoisomerase TopB [Prevotella nigrescens ATCC 33563]
Length = 619
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNRFGKNAQVLSIGRVQTPTLALIVERQKEIDNFKPEPYWVL 223
>gi|392862729|gb|EAS36605.2| DNA topoisomerase III [Coccidioides immitis RS]
Length = 645
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 29 GPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G CQ PTLGF V+R+ +++ FKPEP+W + +T +G+ V+
Sbjct: 230 GSCQFPTLGFVVDRYFRVKNFKPEPFWSIKVTHARDGKTVN 270
>gi|388853372|emb|CCF52992.1| related to DNA topoisomerase III alpha [Ustilago hordei]
Length = 986
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 22 DAS-LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
DAS +ISYGPCQ PTLGF V+R++K+ F E +W L +
Sbjct: 204 DASQVISYGPCQFPTLGFVVDRYNKVVHFVAEAFWYLQV 242
>gi|387133416|ref|YP_006299388.1| DNA topoisomerase III [Prevotella intermedia 17]
gi|386376264|gb|AFJ07934.1| DNA topoisomerase III [Prevotella intermedia 17]
Length = 619
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNRFGKNAQVLSIGRVQTPTLALIVERQKEIDNFKPEPYWVL 223
>gi|340352611|ref|ZP_08675467.1| DNA topoisomerase TopB [Prevotella pallens ATCC 700821]
gi|339613366|gb|EGQ18130.1| DNA topoisomerase TopB [Prevotella pallens ATCC 700821]
Length = 619
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNRFGKNAQVLSIGRVQTPTLALIVERQKEIDNFKPEPYWVL 223
>gi|348689657|gb|EGZ29471.1| hypothetical protein PHYSODRAFT_470148 [Phytophthora sojae]
Length = 916
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
+ S+ISYGPCQ PTLGF VER KI+ F+ E ++ + +T
Sbjct: 207 EKSVISYGPCQFPTLGFVVERFLKIQNFEREAFYYISVT 245
>gi|7960302|gb|AAF71288.1|AF255733_1 DNA topoisomerase III alpha [Drosophila melanogaster]
Length = 1250
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 230 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIKVLHTIDDLTVEFN 276
>gi|24585251|ref|NP_523602.2| topoisomerase 3alpha [Drosophila melanogaster]
gi|33860232|sp|Q9NG98.2|TOP3A_DROME RecName: Full=DNA topoisomerase 3-alpha; AltName: Full=DNA
topoisomerase III alpha
gi|22946848|gb|AAF53813.2| topoisomerase 3alpha [Drosophila melanogaster]
gi|51092196|gb|AAT94511.1| LD04601p [Drosophila melanogaster]
gi|220950368|gb|ACL87727.1| Top3alpha-PA [synthetic construct]
Length = 1250
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 230 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIKVLHTIDDLTVEFN 276
>gi|445112858|ref|ZP_21377317.1| DNA topoisomerase III [Prevotella nigrescens F0103]
gi|444841352|gb|ELX68368.1| DNA topoisomerase III [Prevotella nigrescens F0103]
Length = 619
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNRFGKNAQVLSIGRVQTPTLALIVERQKEIDNFKPEPYWVL 223
>gi|195580189|ref|XP_002079938.1| GD24215 [Drosophila simulans]
gi|194191947|gb|EDX05523.1| GD24215 [Drosophila simulans]
Length = 857
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIKVLHTIDDLTVEFN 251
>gi|444322976|ref|XP_004182129.1| hypothetical protein TBLA_0H03290 [Tetrapisispora blattae CBS 6284]
gi|387515175|emb|CCH62610.1| hypothetical protein TBLA_0H03290 [Tetrapisispora blattae CBS 6284]
Length = 659
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D+ +ISYG CQ PTLGF V+R ++IR F E +W + L
Sbjct: 231 DSVVISYGTCQFPTLGFVVDRFERIRNFISEEFWTIQL 268
>gi|238578791|ref|XP_002388836.1| hypothetical protein MPER_12103 [Moniliophthora perniciosa FA553]
gi|215450488|gb|EEB89766.1| hypothetical protein MPER_12103 [Moniliophthora perniciosa FA553]
Length = 421
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L L SYGPCQ P LGF V R ++ F+P+P+W + L +
Sbjct: 197 LSDGLYSYGPCQFPCLGFVVARFKDVQNFRPDPFWYIYLAV 237
>gi|195345123|ref|XP_002039125.1| GM17356 [Drosophila sechellia]
gi|194134255|gb|EDW55771.1| GM17356 [Drosophila sechellia]
Length = 1251
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ +I F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEIEAFVSEPFWKIKVLHTIDDLTVEFN 251
>gi|429725339|ref|ZP_19260175.1| DNA topoisomerase [Prevotella sp. oral taxon 473 str. F0040]
gi|429150197|gb|EKX93141.1| DNA topoisomerase [Prevotella sp. oral taxon 473 str. F0040]
Length = 811
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGDLD----ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYGD + A +S G QTPTL VER +I+ F+PEPYW+L
Sbjct: 179 YTLKYGDNNRRRGAQPLSIGRVQTPTLAMIVERQHEIQNFQPEPYWVL 226
>gi|45200996|ref|NP_986566.1| AGL101Cp [Ashbya gossypii ATCC 10895]
gi|44985766|gb|AAS54390.1| AGL101Cp [Ashbya gossypii ATCC 10895]
gi|374109812|gb|AEY98717.1| FAGL101Cp [Ashbya gossypii FDAG1]
Length = 631
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+LISYG CQ PTLGF V+R+++I+ F E +W L L +
Sbjct: 213 ALISYGTCQFPTLGFVVDRYERIQNFVSEGFWYLQLLI 250
>gi|315230416|ref|YP_004070852.1| DNA topoisomerase I [Thermococcus barophilus MP]
gi|315183444|gb|ADT83629.1| DNA topoisomerase I [Thermococcus barophilus MP]
Length = 719
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I FKP PYW++ +TL NG+
Sbjct: 195 ILSTGRVQGPTLKFLVEREKEIANFKPTPYWVIKMTLEKNGK 236
>gi|225431699|ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
Length = 914
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++SYGPCQ PTLGF VER+ +I++ +PE +W ++ +
Sbjct: 210 VLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCS 245
>gi|303237307|ref|ZP_07323877.1| DNA topoisomerase [Prevotella disiens FB035-09AN]
gi|302482694|gb|EFL45719.1| DNA topoisomerase [Prevotella disiens FB035-09AN]
Length = 619
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNRYGRNAQVLSIGRVQTPTLALIVERQREIDNFKPEPYWVL 223
>gi|374327011|ref|YP_005085211.1| DNA topoisomerase [Pyrobaculum sp. 1860]
gi|356642280|gb|AET32959.1| DNA topoisomerase (topA) [Pyrobaculum sp. 1860]
Length = 598
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++E +G++ +SYGPCQTP LG V R + R FKPE Y++L + +
Sbjct: 180 FLTLAVREHLERGRF-------LSYGPCQTPVLGMVVTRELQRRNFKPEKYYILKALVEV 232
Query: 64 NG 65
G
Sbjct: 233 EG 234
>gi|452846702|gb|EME48634.1| hypothetical protein DOTSEDRAFT_67618 [Dothistroma septosporum
NZE10]
Length = 675
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
ISYG CQ PTLGF VER+ ++R F PE +W
Sbjct: 212 ISYGSCQFPTLGFVVERYLRVRNFVPETFW 241
>gi|145535065|ref|XP_001453271.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420982|emb|CAK85874.1| unnamed protein product [Paramecium tetraurelia]
Length = 895
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S++SYGPCQ PTLGF V+R +I +F E +W +
Sbjct: 212 SSIVSYGPCQIPTLGFVVQRQKEIDSFVKEKFWFI 246
>gi|145511830|ref|XP_001441837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409098|emb|CAK74440.1| unnamed protein product [Paramecium tetraurelia]
Length = 947
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
S+ISYGPCQ PTLGF V+R +I +F E +W +
Sbjct: 213 SVISYGPCQIPTLGFVVQRQKEIDSFVKEKFWFI 246
>gi|68075963|ref|XP_679901.1| DNA topoisomerase III [Plasmodium berghei strain ANKA]
gi|56500744|emb|CAH93722.1| DNA topoisomerase III, putative [Plasmodium berghei]
Length = 674
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +ISYGPCQ PTLGF V R+ +I+ F E YW + +
Sbjct: 202 DTKIISYGPCQFPTLGFVVNRYLQIKNFNNEYYWTIKM 239
>gi|70952526|ref|XP_745425.1| DNA topoisomerase III [Plasmodium chabaudi chabaudi]
gi|56525744|emb|CAH76018.1| DNA topoisomerase III, putative [Plasmodium chabaudi chabaudi]
Length = 675
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +ISYGPCQ PTLGF V R+ +I+ F E YW + +
Sbjct: 203 DTKIISYGPCQFPTLGFVVNRYLQIKNFNNEYYWTIKM 240
>gi|296088524|emb|CBI37515.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++SYGPCQ PTLGF VER+ +I++ +PE +W ++ +
Sbjct: 210 VLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCS 245
>gi|258648091|ref|ZP_05735560.1| DNA topoisomerase III [Prevotella tannerae ATCC 51259]
gi|260851955|gb|EEX71824.1| DNA topoisomerase III [Prevotella tannerae ATCC 51259]
Length = 670
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG ++ +S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQRGSTPLSIGRVQTPTLALIVRRQAEIEHFKPEPYWVL 219
>gi|82914812|ref|XP_728858.1| DNA topoisomerase III [Plasmodium yoelii yoelii 17XNL]
gi|23485425|gb|EAA20423.1| DNA topoisomerase iii [Plasmodium yoelii yoelii]
Length = 677
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +ISYGPCQ PTLGF V R+ +I+ F E YW + +
Sbjct: 203 DTKIISYGPCQFPTLGFVVNRYLQIKNFNNEYYWTIKM 240
>gi|195436636|ref|XP_002066263.1| GK18189 [Drosophila willistoni]
gi|194162348|gb|EDW77249.1| GK18189 [Drosophila willistoni]
Length = 1234
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW-------LLDLTLNLN 64
LISYG CQ PTLGF ER+ ++ F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEVEAFVSEPFWKVKVLHTIEDLTVEFN 251
>gi|239608834|gb|EEQ85821.1| DNA topoisomerase III [Ajellomyces dermatitidis ER-3]
Length = 632
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 19 GDLDASLISY--GPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISY G CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GALEDRVISYVSGSCQFPTLGFVVDRYFRVKNFKPEKFWSIKVSHARDGKTVN 255
>gi|261203873|ref|XP_002629150.1| DNA topoisomerase III [Ajellomyces dermatitidis SLH14081]
gi|239586935|gb|EEQ69578.1| DNA topoisomerase III [Ajellomyces dermatitidis SLH14081]
Length = 632
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 19 GDLDASLISY--GPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISY G CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GALEDRVISYVSGSCQFPTLGFVVDRYFRVKNFKPEKFWSIKVSHARDGKTVN 255
>gi|254579749|ref|XP_002495860.1| ZYRO0C04642p [Zygosaccharomyces rouxii]
gi|238938751|emb|CAR26927.1| ZYRO0C04642p [Zygosaccharomyces rouxii]
Length = 650
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+++ISYG CQ PTLGF V+R ++IR F E +W + L +
Sbjct: 225 STVISYGTCQFPTLGFVVDRFERIRNFIAEEFWYIQLEI 263
>gi|145526124|ref|XP_001448873.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416439|emb|CAK81476.1| unnamed protein product [Paramecium tetraurelia]
Length = 859
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S++SYGPCQ PTLGF V+R +I +F E +W +
Sbjct: 212 SSIVSYGPCQIPTLGFVVQRQKEIDSFVKEQFWFI 246
>gi|194761190|ref|XP_001962812.1| GF14242 [Drosophila ananassae]
gi|190616509|gb|EDV32033.1| GF14242 [Drosophila ananassae]
Length = 1209
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL-------DLTLNLN 64
LISYG CQ PTLGF ER+ ++ F EP+W + DLT+ N
Sbjct: 205 LISYGSCQIPTLGFVAERYKEVEAFVSEPFWKVKVIHTIDDLTVEFN 251
>gi|302774743|ref|XP_002970788.1| hypothetical protein SELMODRAFT_94303 [Selaginella moellendorffii]
gi|300161499|gb|EFJ28114.1| hypothetical protein SELMODRAFT_94303 [Selaginella moellendorffii]
Length = 794
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 31/41 (75%)
Query: 18 YGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+ + + +++SYGPCQ PTLGF VER+ +++ +PE +W ++
Sbjct: 203 FDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFWTIN 243
>gi|302806755|ref|XP_002985109.1| hypothetical protein SELMODRAFT_121488 [Selaginella moellendorffii]
gi|300147319|gb|EFJ13984.1| hypothetical protein SELMODRAFT_121488 [Selaginella moellendorffii]
Length = 791
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 31/41 (75%)
Query: 18 YGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+ + + +++SYGPCQ PTLGF VER+ +++ +PE +W ++
Sbjct: 203 FDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFWTIN 243
>gi|291224920|ref|XP_002732450.1| PREDICTED: MGC80537 protein-like [Saccoglossus kowalevskii]
Length = 916
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L SLIS+G CQ PTLGF VER+ ++++F PE ++ + +T
Sbjct: 205 LADSLISFGSCQFPTLGFVVERYKQVKSFIPETFYRIKVT 244
>gi|16081238|ref|NP_393542.1| DNA topoisomerase I [Thermoplasma acidophilum DSM 1728]
gi|14423969|sp|Q9HM08.1|TOP1_THEAC RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Omega-protein; AltName: Full=Relaxing
enzyme; AltName: Full=Swivelase; AltName:
Full=Untwisting enzyme
gi|10639209|emb|CAC11211.1| DNA topoisomerase III beta related protein [Thermoplasma
acidophilum]
Length = 770
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEW 67
G L S +S G QTPTL V+R +I++F+PE YW + +T + +G++
Sbjct: 186 GRLGKSFLSAGRVQTPTLAIVVDREREIQSFRPERYWTISITFDKDGQF 234
>gi|294495508|ref|YP_003542001.1| DNA topoisomerase [Methanohalophilus mahii DSM 5219]
gi|292666507|gb|ADE36356.1| DNA topoisomerase [Methanohalophilus mahii DSM 5219]
Length = 776
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+++S GPCQTPT GF ER IR F+PE +W ++
Sbjct: 192 NILSIGPCQTPTCGFVYEREKTIRDFQPEDFWKIE 226
>gi|221486524|gb|EEE24785.1| DNA topoisomerase III alpha, putative [Toxoplasma gondii GT1]
Length = 677
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L + ISYGPCQ+PTLGF V R ++ F E YW + +T++
Sbjct: 203 LPSPTISYGPCQSPTLGFVVSRFVEVENFVREAYWTIRVTIS 244
>gi|237834007|ref|XP_002366301.1| DNA topoisomerase III alpha, putative [Toxoplasma gondii ME49]
gi|211963965|gb|EEA99160.1| DNA topoisomerase III alpha, putative [Toxoplasma gondii ME49]
Length = 677
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L + ISYGPCQ+PTLGF V R ++ F E YW + +T++
Sbjct: 203 LPSPTISYGPCQSPTLGFVVSRFVEVENFVREAYWTIRVTIS 244
>gi|353233151|emb|CCD80506.1| putative prokaryotic DNA topoisomerase [Schistosoma mansoni]
Length = 1058
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L LISYG CQ PTLGF VER ++ F EP+W + +T++
Sbjct: 226 LSDQLISYGSCQFPTLGFVVERFREVDQFVSEPFWRIVVTVS 267
>gi|396081254|gb|AFN82872.1| DNA topoisomerase II [Encephalitozoon romaleae SJ-2008]
Length = 622
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
GK G + ++S+GPCQ PTLGF VER + +F PE +W L
Sbjct: 85 GKVGQ-EKKILSFGPCQVPTLGFVVERARERESFVPEMFWTL 125
>gi|154278056|ref|XP_001539853.1| DNA topoisomerase III [Ajellomyces capsulatus NAm1]
gi|150413438|gb|EDN08821.1| DNA topoisomerase III [Ajellomyces capsulatus NAm1]
Length = 632
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 19 GDLDASLISY--GPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L+ +ISY G CQ PTLGF V+R+ +++ FKPE +W + ++ +G+ V+
Sbjct: 203 GVLEDRVISYVPGSCQFPTLGFVVDRYFRVKNFKPEKFWTIKVSHVRDGKTVN 255
>gi|310791677|gb|EFQ27204.1| DNA topoisomerase [Glomerella graminicola M1.001]
Length = 664
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L ISYG CQ PTLGF V+R+ +++ F PE +W + + + G+ V+
Sbjct: 200 GPLQERTISYGSCQFPTLGFVVDRYFRVQNFVPEQFWSIKVMHSREGKKVN 250
>gi|380486032|emb|CCF38971.1| DNA topoisomerase, partial [Colletotrichum higginsianum]
Length = 462
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L ISYG CQ PTLGF V+R+ +++ F PE +W + + + G+ V+
Sbjct: 200 GPLQERTISYGSCQFPTLGFVVDRYFRVQNFVPEQFWSIKVMHSREGKKVN 250
>gi|50311957|ref|XP_456010.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645146|emb|CAG98718.1| KLLA0F20724p [Kluyveromyces lactis]
Length = 659
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-NLNG 65
D +ISYG CQ PTLGF V+R++++ F PE +W + L++ +L+G
Sbjct: 216 DKPVISYGTCQFPTLGFVVDRYERVINFIPEQFWHILLSVKDLDG 260
>gi|171186180|ref|YP_001795099.1| DNA topoisomerase type IA central domain-containing protein
[Pyrobaculum neutrophilum V24Sta]
gi|170935392|gb|ACB40653.1| DNA topoisomerase type IA central domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 604
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++ + +G++ +SYGPCQTP LG V R + R FKPE Y+++ + +
Sbjct: 180 FLTLTVRNSLERGRF-------LSYGPCQTPVLGIVVTRELQRRNFKPEKYYVIKALVEI 232
Query: 64 NGEWV 68
G V
Sbjct: 233 GGHAV 237
>gi|282858543|ref|ZP_06267714.1| DNA topoisomerase [Prevotella bivia JCVIHMP010]
gi|424899437|ref|ZP_18322979.1| DNA topoisomerase III [Prevotella bivia DSM 20514]
gi|282588668|gb|EFB93802.1| DNA topoisomerase [Prevotella bivia JCVIHMP010]
gi|388591637|gb|EIM31876.1| DNA topoisomerase III [Prevotella bivia DSM 20514]
Length = 616
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ +A ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNGFGKNAQVLSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 223
>gi|256052304|ref|XP_002569713.1| prokaryotic DNA topoisomerase [Schistosoma mansoni]
Length = 1165
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L LISYG CQ PTLGF VER ++ F EP+W + +T++
Sbjct: 226 LSDQLISYGSCQFPTLGFVVERFREVDQFVSEPFWRIVVTVS 267
>gi|119871906|ref|YP_929913.1| DNA topoisomerase [Pyrobaculum islandicum DSM 4184]
gi|119673314|gb|ABL87570.1| DNA topoisomerase [Pyrobaculum islandicum DSM 4184]
Length = 604
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+SYGPCQTP LG V R + R FKPE Y+++ + + G
Sbjct: 192 GQFLSYGPCQTPVLGIVVTRELQRRNFKPEKYYVIKAVVEIRG 234
>gi|341581825|ref|YP_004762317.1| DNA topoisomerase I [Thermococcus sp. 4557]
gi|340809483|gb|AEK72640.1| DNA topoisomerase I [Thermococcus sp. 4557]
Length = 719
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I+ FKP PYW++ + L NGE
Sbjct: 195 VLSTGRVQGPTLKFLVDREKEIQNFKPTPYWVIKMLLEKNGE 236
>gi|384486567|gb|EIE78747.1| DNA topoisomerase [Rhizopus delemar RA 99-880]
Length = 480
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++SYG CQ PTLGF V+R+ +++ F PE +W + +T
Sbjct: 113 MLSYGSCQFPTLGFVVDRYQQVKNFIPEEFWKITMT 148
>gi|365992220|ref|XP_003672938.1| hypothetical protein NDAI_0L02110 [Naumovozyma dairenensis CBS 421]
gi|410730103|ref|XP_003671229.2| hypothetical protein NDAI_0G02110 [Naumovozyma dairenensis CBS 421]
gi|401780049|emb|CCD25986.2| hypothetical protein NDAI_0G02110 [Naumovozyma dairenensis CBS 421]
Length = 656
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++ISYG CQ PTLGF V+R+++I+ F E +W + L +
Sbjct: 229 TIISYGACQFPTLGFVVDRYERIKHFVSEEFWYIQLVI 266
>gi|379003817|ref|YP_005259489.1| Topoisomerase IA [Pyrobaculum oguniense TE7]
gi|375159270|gb|AFA38882.1| Topoisomerase IA [Pyrobaculum oguniense TE7]
Length = 602
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+SYGPCQTP LG V R + R FKPE Y+++ + ++G
Sbjct: 192 GQFLSYGPCQTPVLGIVVTRELQRRNFKPEKYYVVKALVEIDG 234
>gi|374711034|ref|ZP_09715468.1| DNA topoisomerase III [Sporolactobacillus inulinus CASD]
Length = 700
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
L+ LN+ A KY D +S G QTPTL +ER + IRTFKP+PYW+L
Sbjct: 169 LIGLNVSRA-LTVKYNDS----LSAGRVQTPTLSMLLERENAIRTFKPKPYWIL 217
>gi|346971576|gb|EGY15028.1| DNA topoisomerase [Verticillium dahliae VdLs.17]
Length = 760
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
G L +ISYG CQ PTLGF V+R+ +++ F PE +W + + G+ V
Sbjct: 200 GPLVEMIISYGSCQFPTLGFVVDRYFRVKNFVPEQFWSIHVNHTQEGKKV 249
>gi|428672326|gb|EKX73240.1| DNA topoisomerase III, putative [Babesia equi]
Length = 622
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++++SYGPCQ PTLGF V+R +I F E YW +++ + L VS
Sbjct: 202 SNVLSYGPCQLPTLGFVVDRFKRIENFVREEYWSINVEVVLEETPVS 248
>gi|156096432|ref|XP_001614250.1| DNA topoisomerase III alpha [Plasmodium vivax Sal-1]
gi|148803124|gb|EDL44523.1| DNA topoisomerase III alpha, putative [Plasmodium vivax]
Length = 666
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+ S+ISYGPCQ PTLGF V R+ I+ F E YW + +
Sbjct: 203 ETSIISYGPCQFPTLGFVVNRYMDIKNFVNEYYWSIKM 240
>gi|85001333|ref|XP_955385.1| DNA topoisomerase iii [Theileria annulata strain Ankara]
gi|65303531|emb|CAI75909.1| DNA topoisomerase iii, putative [Theileria annulata]
Length = 607
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D A+++SYG CQ PTLGF VER I F EP+W + +
Sbjct: 202 DTKAAILSYGTCQLPTLGFVVERFILIENFVSEPFWTIQV 241
>gi|357113918|ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
Length = 924
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 LKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LK+A G+ ++SYGPCQ PTLGF VER +I+ +PE +W ++ +
Sbjct: 203 LKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCS 254
>gi|159040701|ref|YP_001539953.1| DNA topoisomerase type IA central domain-containing protein
[Caldivirga maquilingensis IC-167]
gi|157919536|gb|ABW00963.1| DNA topoisomerase type IA central domain protein [Caldivirga
maquilingensis IC-167]
Length = 610
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+SYGPCQTP L V+R + FKPE Y+ + L + NGE +
Sbjct: 197 GEFLSYGPCQTPVLNLVVQRALERENFKPEVYYKIKLIIEANGELI 242
>gi|170039894|ref|XP_001847754.1| DNA topoisomerase 3-alpha [Culex quinquefasciatus]
gi|167863475|gb|EDS26858.1| DNA topoisomerase 3-alpha [Culex quinquefasciatus]
Length = 992
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
SL+SYG CQ PTLGF +R+ +I F P+ +W + L
Sbjct: 204 SLVSYGSCQIPTLGFVAQRYKEIENFIPQAFWKIKL 239
>gi|431799126|ref|YP_007226030.1| DNA topoisomerase III [Echinicola vietnamensis DSM 17526]
gi|430789891|gb|AGA80020.1| DNA topoisomerase III [Echinicola vietnamensis DSM 17526]
Length = 780
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Y KYG ++S G QTPTL V RH +I FKPEPYW L T
Sbjct: 176 YTLKYGGYK-QVLSIGRVQTPTLAMLVNRHQEIEQFKPEPYWELQTT 221
>gi|308198103|ref|XP_001386841.2| DNA topoisomerase [Scheffersomyces stipitis CBS 6054]
gi|149388862|gb|EAZ62818.2| DNA topoisomerase [Scheffersomyces stipitis CBS 6054]
Length = 616
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
L SYG CQ PTLGF V+R+ ++++F PE +W +
Sbjct: 205 LASYGTCQFPTLGFVVDRYKRVKSFIPEKFWYI 237
>gi|119896387|ref|YP_931600.1| DNA topoisomerase III [Azoarcus sp. BH72]
gi|119668800|emb|CAL92713.1| DNA topoisomerase III [Azoarcus sp. BH72]
Length = 857
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-----NLNGEWV 68
L + G QTPTL VER DKIR FKP YW L+ T G W+
Sbjct: 190 LTTVGRVQTPTLAIVVEREDKIRKFKPRDYWELEATFGCAAGEYTGRWL 238
>gi|389584867|dbj|GAB67598.1| DNA topoisomerase III alpha [Plasmodium cynomolgi strain B]
Length = 646
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
S+ISYGPCQ PTLGF V R+ I+ F E YW + +
Sbjct: 205 SIISYGPCQFPTLGFVVNRYMDIKNFVSEYYWSIKM 240
>gi|145591572|ref|YP_001153574.1| DNA topoisomerase [Pyrobaculum arsenaticum DSM 13514]
gi|145283340|gb|ABP50922.1| DNA topoisomerase [Pyrobaculum arsenaticum DSM 13514]
Length = 602
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+SYGPCQTP LG V R + R FKPE Y+++ + + G
Sbjct: 192 GQFLSYGPCQTPVLGIVVTRELQRRNFKPEKYYVVKALVEIGG 234
>gi|325191461|emb|CCA26234.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2356
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191460|emb|CCA26233.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2385
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191459|emb|CCA26232.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2392
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191458|emb|CCA26231.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2417
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191457|emb|CCA26230.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2383
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191456|emb|CCA26229.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2387
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191455|emb|CCA26228.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2390
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191454|emb|CCA26227.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2412
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191453|emb|CCA26226.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2414
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|325191452|emb|CCA26225.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 2419
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYGPCQ PTLGF VERH +I F E ++
Sbjct: 230 DRGVISYGPCQFPTLGFVVERHLEIENFVREEFY 263
>gi|452822724|gb|EME29741.1| DNA topoisomerase III alpha [Galdieria sulphuraria]
Length = 646
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+++SYGPCQ PTLG V+R IR F+P ++ L+LT++
Sbjct: 233 AILSYGPCQFPTLGLVVDRLLTIRAFQPRLFYYLELTIS 271
>gi|212223461|ref|YP_002306697.1| topA [Thermococcus onnurineus NA1]
gi|212008418|gb|ACJ15800.1| topA [Thermococcus onnurineus NA1]
Length = 717
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I+ FKP PYW++ + L NG+
Sbjct: 195 VLSTGRVQGPTLKFLVDREKEIQNFKPTPYWVIKMVLEKNGQ 236
>gi|312072253|ref|XP_003138981.1| DNA topoisomerase III [Loa loa]
gi|307765852|gb|EFO25086.1| DNA topoisomerase III [Loa loa]
Length = 800
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +++SYG CQ PTLGF VER+ I+ F E +W + +
Sbjct: 230 DKNIVSYGSCQFPTLGFIVERYQAIKEFISETFWKISM 267
>gi|402593065|gb|EJW86992.1| DNA topoisomerase [Wuchereria bancrofti]
Length = 795
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 LKEADYQGKYGDL--DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
L+ + +G++ D +++SYG CQ PTLGF VER+ I+ F E +W + +
Sbjct: 210 LQTLHLRNNFGNIFRDKNIVSYGSCQFPTLGFIVERYKAIKEFISETFWKISM 262
>gi|116192151|ref|XP_001221888.1| hypothetical protein CHGG_05793 [Chaetomium globosum CBS 148.51]
gi|88181706|gb|EAQ89174.1| hypothetical protein CHGG_05793 [Chaetomium globosum CBS 148.51]
Length = 680
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 12/68 (17%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL------ 57
L LNL+ G L +SYG CQ PTLGF V+R+ +++ F PE +W +
Sbjct: 178 FLTLNLRPLG-----GPLSKLTLSYGSCQFPTLGFVVDRYFRVKNFVPETFWGIKMMHER 232
Query: 58 -DLTLNLN 64
D+ +N N
Sbjct: 233 DDIKVNFN 240
>gi|156381054|ref|XP_001632081.1| predicted protein [Nematostella vectensis]
gi|156219132|gb|EDO40018.1| predicted protein [Nematostella vectensis]
Length = 940
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
G L LISYG CQ PTLGF VER+ +++ F PE ++ + ++
Sbjct: 199 GFLSDQLISYGSCQFPTLGFVVERYKQVQQFVPEQFFKIKVS 240
>gi|428186174|gb|EKX55025.1| hypothetical protein GUITHDRAFT_156833 [Guillardia theta CCMP2712]
Length = 652
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++ L L+S+GPCQ TLGF V+R KI F PE +W L+ +G+
Sbjct: 201 RFEQLSDKLLSWGPCQFATLGFIVDRAWKIERFVPEDFWSFRCNLSRDGK 250
>gi|323456520|gb|EGB12387.1| hypothetical protein AURANDRAFT_20044, partial [Aureococcus
anophagefferens]
Length = 627
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 15 QGKY-GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
QGKY G + ++SYGPCQ PTLGF V R +I +W +D+
Sbjct: 206 QGKYAGVAEEGVVSYGPCQFPTLGFIVARQQEIDAHDARDFWRVDM 251
>gi|367050678|ref|XP_003655718.1| hypothetical protein THITE_2119715 [Thielavia terrestris NRRL 8126]
gi|347002982|gb|AEO69382.1| hypothetical protein THITE_2119715 [Thielavia terrestris NRRL 8126]
Length = 667
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L LNL+ G + ISYG CQ PTLGF V+R+ +++ F PE +W + +
Sbjct: 191 FLTLNLRPLG-----GPMSNLTISYGSCQFPTLGFVVDRYFRVKNFVPEAFWGIKMMHER 245
Query: 64 NG 65
+G
Sbjct: 246 DG 247
>gi|336476470|ref|YP_004615611.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
gi|335929851|gb|AEH60392.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
Length = 772
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S GPCQ+PT GF ER IR FKP +W ++ N +GE
Sbjct: 193 ILSVGPCQSPTCGFVYERERTIRDFKPTDFWKIEALFN-SGE 233
>gi|170596371|ref|XP_001902741.1| DNA topoisomerase III [Brugia malayi]
gi|158589402|gb|EDP28410.1| DNA topoisomerase III, putative [Brugia malayi]
Length = 718
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +++SYG CQ PTLGF VER+ I+ F E +W + +
Sbjct: 151 DKNIVSYGSCQFPTLGFIVERYKAIKEFISETFWKISM 188
>gi|301612786|ref|XP_002935889.1| PREDICTED: DNA topoisomerase 3-alpha [Xenopus (Silurana)
tropicalis]
Length = 1021
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 239 LSNQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVT 278
>gi|294659706|ref|XP_002770630.1| DEHA2G13376p [Debaryomyces hansenii CBS767]
gi|199434172|emb|CAR65964.1| DEHA2G13376p [Debaryomyces hansenii CBS767]
Length = 624
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
S ISYG CQ PTLGF V+R++++++F E +W + + + + + V
Sbjct: 205 GSFISYGTCQFPTLGFIVDRYNRVKSFIAEDFWYISVEVKKDNQNV 250
>gi|190347906|gb|EDK40263.2| hypothetical protein PGUG_04361 [Meyerozyma guilliermondii ATCC
6260]
Length = 616
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++SYG CQ PTLGF V+R+ +++ F EP+W
Sbjct: 205 GQVVSYGTCQFPTLGFVVDRYTRVKNFISEPFW 237
>gi|147906574|ref|NP_001085699.1| topoisomerase (DNA) III alpha [Xenopus laevis]
gi|49115195|gb|AAH73221.1| MGC80537 protein [Xenopus laevis]
Length = 1022
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 239 LSNQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVT 278
>gi|357043015|ref|ZP_09104714.1| hypothetical protein HMPREF9138_01186 [Prevotella histicola F0411]
gi|355368611|gb|EHG16024.1| hypothetical protein HMPREF9138_01186 [Prevotella histicola F0411]
Length = 634
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ + ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNNYGKGQVLSIGRVQTPTLALIVQRQKEINNFKPEPYWVL 222
>gi|294673968|ref|YP_003574584.1| DNA topoisomerase III [Prevotella ruminicola 23]
gi|294471772|gb|ADE81161.1| DNA topoisomerase III [Prevotella ruminicola 23]
Length = 702
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIENFKPEPYWVL 218
>gi|380021980|ref|XP_003694833.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
[Apis florea]
Length = 1011
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW---LLDLTLNLNGEW 67
LISYG CQ PTLGF VER I FK EP W ++D+ N++ E+
Sbjct: 206 LISYGSCQFPTLGFVVERFLAIEEFKIEPCWKIKVMDIRDNISVEF 251
>gi|449328939|gb|AGE95214.1| DNA topoisomerase III [Encephalitozoon cuniculi]
Length = 621
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S+GPCQ PTLGF VER + +F PE +W L + G
Sbjct: 93 ILSFGPCQVPTLGFVVERARERESFVPEIFWTLKFKVMHKG 133
>gi|325968322|ref|YP_004244514.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707525|gb|ADY01012.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
Length = 618
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
S +SYGPCQTP L V+R + FKPE Y+ L + ++ +G+
Sbjct: 200 GSFLSYGPCQTPVLNLVVQRALERENFKPEKYYTLHIIVDADGK 243
>gi|19074185|ref|NP_584791.1| DNA TOPOISOMERASE III [Encephalitozoon cuniculi GB-M1]
Length = 621
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF VER + +F PE +W L
Sbjct: 93 ILSFGPCQVPTLGFVVERARERESFVPEIFWTL 125
>gi|392512614|emb|CAD25295.2| DNA TOPOISOMERASE III [Encephalitozoon cuniculi GB-M1]
Length = 722
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF VER + +F PE +W L
Sbjct: 194 ILSFGPCQVPTLGFVVERARERESFVPEIFWTL 226
>gi|345285958|gb|AEN79294.1| DNA topoisomerase 3-beta-1 [Acanthisitta chloris]
gi|345285996|gb|AEN79313.1| DNA topoisomerase 3-beta-1 [Apus apus]
Length = 63
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 23/23 (100%)
Query: 14 YQGKYGDLDASLISYGPCQTPTL 36
+QGKYG+LD+SLIS+GPCQTPTL
Sbjct: 41 FQGKYGNLDSSLISFGPCQTPTL 63
>gi|223476951|ref|YP_002581633.1| DNA topoisomerase I [Thermococcus sp. AM4]
gi|214032177|gb|EEB73007.1| DNA topoisomerase I [Thermococcus sp. AM4]
Length = 719
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I++FKP+PYW++ + L G+
Sbjct: 195 VLSTGRVQGPTLKFLVEREKEIQSFKPKPYWVIKMILEKEGK 236
>gi|71026270|ref|XP_762816.1| DNA topoisomerase III [Theileria parva strain Muguga]
gi|68349768|gb|EAN30533.1| DNA topoisomerase III, putative [Theileria parva]
Length = 531
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
A+++SYG CQ PTLGF VER I F EP+W +++
Sbjct: 158 AAILSYGTCQLPTLGFVVERFILIENFISEPFWTINV 194
>gi|345882165|ref|ZP_08833671.1| hypothetical protein HMPREF9431_02335 [Prevotella oulorum F0390]
gi|343918128|gb|EGV28898.1| hypothetical protein HMPREF9431_02335 [Prevotella oulorum F0390]
Length = 684
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKPEPYWVL 218
>gi|14521628|ref|NP_127104.1| DNA topoisomerase I [Pyrococcus abyssi GE5]
gi|14423980|sp|Q9UYS8.1|TOP1_PYRAB RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Omega-protein; AltName: Full=Relaxing
enzyme; AltName: Full=Swivelase; AltName:
Full=Untwisting enzyme
gi|5458847|emb|CAB50334.1| topA DNA topoisomerase I [Pyrococcus abyssi GE5]
gi|380742240|tpe|CCE70874.1| TPA: DNA topoisomerase I [Pyrococcus abyssi GE5]
Length = 685
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I++F P+PYW++ L + NG+
Sbjct: 194 VLSTGRVQGPTLKFLVEREREIQSFVPKPYWVIKLVIEKNGQ 235
>gi|317503689|ref|ZP_07961706.1| DNA topoisomerase TopB [Prevotella salivae DSM 15606]
gi|315665210|gb|EFV04860.1| DNA topoisomerase TopB [Prevotella salivae DSM 15606]
Length = 704
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NKQVLSIGRVQTPTLALIVNRQKEIDNFKPEPYWVL 218
>gi|401826074|ref|XP_003887131.1| topoisomerase IA [Encephalitozoon hellem ATCC 50504]
gi|392998289|gb|AFM98150.1| topoisomerase IA [Encephalitozoon hellem ATCC 50504]
Length = 723
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+ ++S+GPCQ PTLGF VER + F PE +W L
Sbjct: 191 EKKIVSFGPCQVPTLGFVVERAKERERFVPEMFWTL 226
>gi|71894753|ref|NP_001025807.1| DNA topoisomerase 3-alpha isoform 1 [Gallus gallus]
gi|66796185|dbj|BAD99110.1| topoisomerase III alpha [Gallus gallus]
Length = 1020
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 236 LADQLISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVT 275
>gi|326929014|ref|XP_003210667.1| PREDICTED: DNA topoisomerase 3-alpha-like [Meleagris gallopavo]
Length = 1020
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 236 LADQLISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVT 275
>gi|449281375|gb|EMC88455.1| DNA topoisomerase 3-alpha [Columba livia]
Length = 1016
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 234 LADQLISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVT 273
>gi|393201313|ref|YP_006463155.1| topoisomerase IA [Solibacillus silvestris StLB046]
gi|327440644|dbj|BAK17009.1| topoisomerase IA [Solibacillus silvestris StLB046]
Length = 724
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FKPEP+W ++ N NG+
Sbjct: 194 VFSIGRVQTPTLALIVKREHEIANFKPEPFWEVEAEFNFNGK 235
>gi|406667948|ref|ZP_11075698.1| DNA topoisomerase 3 [Bacillus isronensis B3W22]
gi|405384251|gb|EKB43700.1| DNA topoisomerase 3 [Bacillus isronensis B3W22]
Length = 724
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FKPEP+W ++ N NG+
Sbjct: 194 VFSIGRVQTPTLALIVKREHEIANFKPEPFWEVEAEFNFNGK 235
>gi|325856637|ref|ZP_08172275.1| DNA topoisomerase [Prevotella denticola CRIS 18C-A]
gi|325483351|gb|EGC86326.1| DNA topoisomerase [Prevotella denticola CRIS 18C-A]
Length = 620
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNSYGKGQILSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 222
>gi|255072381|ref|XP_002499865.1| predicted protein [Micromonas sp. RCC299]
gi|226515127|gb|ACO61123.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 639
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LL+ + A G D +++SYGPCQ PTLGF V+R I PE +W + L+
Sbjct: 196 LLQRSGVAARLPGADADGKGNIVSYGPCQFPTLGFIVQRKWDIDAHVPENFWKIKLS 252
>gi|224070273|ref|XP_002189800.1| PREDICTED: DNA topoisomerase 3-alpha [Taeniopygia guttata]
Length = 1009
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE ++ + +T
Sbjct: 234 LADQLISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVT 273
>gi|345883323|ref|ZP_08834767.1| hypothetical protein HMPREF0666_00943 [Prevotella sp. C561]
gi|345043798|gb|EGW47850.1| hypothetical protein HMPREF0666_00943 [Prevotella sp. C561]
Length = 622
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL VER +I FKPEPYW+L
Sbjct: 176 YTLKYGNNSYGRGQVLSIGRVQTPTLALIVERQKEIDNFKPEPYWVL 222
>gi|327313416|ref|YP_004328853.1| DNA topoisomerase [Prevotella denticola F0289]
gi|326945173|gb|AEA21058.1| DNA topoisomerase [Prevotella denticola F0289]
Length = 620
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNSYGKGQILSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 222
>gi|374386691|ref|ZP_09644189.1| DNA topoisomerase III [Odoribacter laneus YIT 12061]
gi|373223641|gb|EHP45989.1| DNA topoisomerase III [Odoribacter laneus YIT 12061]
Length = 707
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
LL +N A Y KYGD +++S G QTPTL VER I FKPE YW ++ N
Sbjct: 167 LLGMNATRA-YTLKYGD-GKNVLSIGRVQTPTLALVVERQKAIENFKPETYW--EIRTNY 222
Query: 64 NG 65
G
Sbjct: 223 RG 224
>gi|356516381|ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
Length = 913
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++SYGPCQ PTLGF VER +I+ +PE +W
Sbjct: 211 VLSYGPCQFPTLGFVVERFWEIQAHEPEEFW 241
>gi|357613303|gb|EHJ68426.1| prokaryotic DNA topoisomerase [Danaus plexippus]
Length = 734
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++ ++S+G CQ PTLGF VER I F PE +W L + L E
Sbjct: 202 NVSNKIVSFGSCQFPTLGFVVERWRAIENFIPEKFWKLQVNHTLGNE 248
>gi|390341006|ref|XP_782119.2| PREDICTED: DNA topoisomerase 3-alpha [Strongylocentrotus
purpuratus]
Length = 1058
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LIS+G CQ PTLGF VER+ ++ F PE ++ + +T
Sbjct: 224 LQNQLISFGSCQFPTLGFVVERYKQVEAFIPETFYKIKVT 263
>gi|303389042|ref|XP_003072754.1| DNA topoisomerase III [Encephalitozoon intestinalis ATCC 50506]
gi|303301896|gb|ADM11394.1| DNA topoisomerase III [Encephalitozoon intestinalis ATCC 50506]
Length = 622
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+ ++S+GPCQ PTLGF VER + +F PE +W L
Sbjct: 90 EKRVLSFGPCQVPTLGFVVERARERESFVPEMFWTL 125
>gi|57641026|ref|YP_183504.1| DNA topoisomerase I [Thermococcus kodakarensis KOD1]
gi|57159350|dbj|BAD85280.1| DNA topoisomerase I [Thermococcus kodakarensis KOD1]
Length = 1229
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G Q PTL F VER +I+ F+P+PYW++ + L NG
Sbjct: 195 VLSTGRVQGPTLKFLVEREKEIQNFEPKPYWVIKMLLEKNG 235
>gi|118374593|ref|XP_001020484.1| DNA topoisomerase family protein [Tetrahymena thermophila]
gi|89302251|gb|EAS00239.1| DNA topoisomerase family protein [Tetrahymena thermophila SB210]
Length = 1049
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+ISYGPCQ PTLGF V+R+++I F+ E +W +
Sbjct: 194 VISYGPCQFPTLGFVVDRYNQILKFQDEKFWYI 226
>gi|330804855|ref|XP_003290405.1| hypothetical protein DICPUDRAFT_37309 [Dictyostelium purpureum]
gi|325079456|gb|EGC33055.1| hypothetical protein DICPUDRAFT_37309 [Dictyostelium purpureum]
Length = 831
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
S+ISYGPCQ PTLGF VER+ + F E +W +++ N
Sbjct: 212 SIISYGPCQFPTLGFVVERYFRKTNFVREDFWTVNVYDN 250
>gi|294880144|ref|XP_002768906.1| prokaryotic dna topoisomerase, putative [Perkinsus marinus ATCC
50983]
gi|239871904|gb|EER01624.1| prokaryotic dna topoisomerase, putative [Perkinsus marinus ATCC
50983]
Length = 605
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
++SYGPCQ PTLGF V+R R F EP+W + T+ +
Sbjct: 200 ILSYGPCQFPTLGFVVQRWLLQRNFIREPFWTIKCTVRV 238
>gi|219851924|ref|YP_002466356.1| DNA topoisomerase type IA central domain-containing protein
[Methanosphaerula palustris E1-9c]
gi|219546183|gb|ACL16633.1| DNA topoisomerase type IA central domain protein [Methanosphaerula
palustris E1-9c]
Length = 938
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+++S G Q+PTL V+R +I F PEPYW+L + N +GE V
Sbjct: 189 NILSVGRVQSPTLAMMVDREKEIEAFVPEPYWVLTVDSNKDGEPV 233
>gi|146415324|ref|XP_001483632.1| hypothetical protein PGUG_04361 [Meyerozyma guilliermondii ATCC
6260]
Length = 616
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++SYG CQ PTLGF V+R+ +++ F EP+W
Sbjct: 205 GQVVSYGTCQFPTLGFVVDRYTRVKNFILEPFW 237
>gi|435851915|ref|YP_007313501.1| topoisomerase IA [Methanomethylovorans hollandica DSM 15978]
gi|433662545|gb|AGB49971.1| topoisomerase IA [Methanomethylovorans hollandica DSM 15978]
Length = 791
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
++S GPCQTPT GF ER I+ F PE +W ++
Sbjct: 206 ILSIGPCQTPTCGFVYERDKAIKEFNPEDFWKIE 239
>gi|373499716|ref|ZP_09590119.1| hypothetical protein HMPREF9140_00237 [Prevotella micans F0438]
gi|371956803|gb|EHO74583.1| hypothetical protein HMPREF9140_00237 [Prevotella micans F0438]
Length = 604
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KY + ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYAT-NKQVLSIGRVQTPTLALIVQRQKEIDNFKPEPYWML 218
>gi|333378766|ref|ZP_08470493.1| hypothetical protein HMPREF9456_02088 [Dysgonomonas mossii DSM
22836]
gi|332885578|gb|EGK05824.1| hypothetical protein HMPREF9456_02088 [Dysgonomonas mossii DSM
22836]
Length = 694
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + S++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTVKYGQ-NRSVLSIGRVQTPTLALIVNRQLEIENFKPEPYWEL 218
>gi|189462548|ref|ZP_03011333.1| hypothetical protein BACCOP_03238 [Bacteroides coprocola DSM 17136]
gi|189430709|gb|EDU99693.1| DNA topoisomerase [Bacteroides coprocola DSM 17136]
Length = 703
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I FKPEPYW L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVKRQQEIENFKPEPYWEL 218
>gi|18313747|ref|NP_560414.1| DNA topoisomerase (topA) [Pyrobaculum aerophilum str. IM2]
gi|18161303|gb|AAL64596.1| DNA topoisomerase (topA) [Pyrobaculum aerophilum str. IM2]
Length = 602
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+SYGPCQTP LG V R + R FKPE Y+++
Sbjct: 192 GQFLSYGPCQTPVLGIVVTRELQRRNFKPEKYYVI 226
>gi|240103365|ref|YP_002959674.1| DNA topoisomerase I (topA) [Thermococcus gammatolerans EJ3]
gi|239910919|gb|ACS33810.1| DNA topoisomerase I (topA) [Thermococcus gammatolerans EJ3]
Length = 712
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
++S G Q PTL F VER +I+ FKP+PYW++ + L N
Sbjct: 195 VLSTGRVQGPTLKFLVEREKEIQNFKPKPYWVIKMILEKN 234
>gi|333381946|ref|ZP_08473624.1| hypothetical protein HMPREF9455_01790 [Dysgonomonas gadei ATCC
BAA-286]
gi|332829507|gb|EGK02156.1| hypothetical protein HMPREF9455_01790 [Dysgonomonas gadei ATCC
BAA-286]
Length = 700
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + S++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTVKYGQ-NRSVLSIGRVQTPTLALIVNRQLEIENFKPEPYWEL 218
>gi|325269023|ref|ZP_08135644.1| DNA topoisomerase TopB [Prevotella multiformis DSM 16608]
gi|324988644|gb|EGC20606.1| DNA topoisomerase TopB [Prevotella multiformis DSM 16608]
Length = 714
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 268 YTLKYGNNSYGRGQVLSIGRVQTPTLALIVQRQKEIDHFKPEPYWVL 314
>gi|308483746|ref|XP_003104074.1| CRE-TOP-3 protein [Caenorhabditis remanei]
gi|308258382|gb|EFP02335.1| CRE-TOP-3 protein [Caenorhabditis remanei]
Length = 780
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
++ +ISYG CQ PTLGF +R+ I F EP+W L + + G V
Sbjct: 207 NSKVISYGSCQFPTLGFVTDRYKLIENFISEPFWKLSVEHSREGHKV 253
>gi|390960560|ref|YP_006424394.1| DNA topoisomerase, type IA [Thermococcus sp. CL1]
gi|390518868|gb|AFL94600.1| DNA topoisomerase, type IA [Thermococcus sp. CL1]
Length = 716
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I F+P+PYW++ +TL N +
Sbjct: 195 VLSTGRVQGPTLKFLVEREREIANFQPKPYWVIKMTLEKNSK 236
>gi|288803569|ref|ZP_06409000.1| DNA topoisomerase III [Prevotella melaninogenica D18]
gi|288333992|gb|EFC72436.1| DNA topoisomerase III [Prevotella melaninogenica D18]
Length = 622
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNSYGRGQVLSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 222
>gi|341880276|gb|EGT36211.1| CBN-TOP-3 protein [Caenorhabditis brenneri]
Length = 763
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++ +ISYG CQ PTLGF +R+ I F EP+W L
Sbjct: 207 NSKVISYGSCQFPTLGFVTDRYKMIENFISEPFWKL 242
>gi|221058465|ref|XP_002259878.1| DNA topoisomerase III [Plasmodium knowlesi strain H]
gi|193809951|emb|CAQ41145.1| DNA topoisomerase III, putative [Plasmodium knowlesi strain H]
Length = 661
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++ISYGPCQ PTLGF V R+ I+ F E YW + +
Sbjct: 205 NIISYGPCQFPTLGFVVNRYMDIKNFVNEYYWSIKM 240
>gi|302345509|ref|YP_003813862.1| DNA topoisomerase [Prevotella melaninogenica ATCC 25845]
gi|302150215|gb|ADK96477.1| DNA topoisomerase [Prevotella melaninogenica ATCC 25845]
Length = 622
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLKYGNNSYGRGQVLSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 222
>gi|367471250|ref|ZP_09470901.1| DNA topoisomerase III [Patulibacter sp. I11]
gi|365813678|gb|EHN08925.1| DNA topoisomerase III [Patulibacter sp. I11]
Length = 789
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+S G QTPTL R ++IR F PEPYWL+D
Sbjct: 199 VSLGRVQTPTLAILARREEEIRAFVPEPYWLVD 231
>gi|14590513|ref|NP_142581.1| DNA topoisomerase I [Pyrococcus horikoshii OT3]
gi|14423960|sp|O58356.1|TOP1_PYRHO RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Omega-protein; AltName: Full=Relaxing
enzyme; AltName: Full=Swivelase; AltName:
Full=Untwisting enzyme
gi|3257028|dbj|BAA29711.1| 686aa long hypothetical DNA topoisomerase I [Pyrococcus horikoshii
OT3]
Length = 686
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I++F P PYW++ L NG+
Sbjct: 194 VLSTGRVQGPTLKFLVEREREIQSFVPRPYWVIKLIFEKNGQ 235
>gi|126459728|ref|YP_001056006.1| DNA topoisomerase [Pyrobaculum calidifontis JCM 11548]
gi|126249449|gb|ABO08540.1| DNA topoisomerase [Pyrobaculum calidifontis JCM 11548]
Length = 596
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+SYGPCQTP LG V R + FKPE Y+++ +++ G V
Sbjct: 191 GQFLSYGPCQTPVLGIVVNRELERINFKPEKYYVIKAVVDIGGHRV 236
>gi|17555378|ref|NP_499558.1| Protein TOP-3 [Caenorhabditis elegans]
gi|6686028|sp|O61660.1|TOP3_CAEEL RecName: Full=DNA topoisomerase 3; AltName: Full=DNA topoisomerase
III
gi|3047013|gb|AAC13567.1| DNA topoisomerase III [Caenorhabditis elegans]
gi|14530655|emb|CAB60518.2| Protein TOP-3 [Caenorhabditis elegans]
Length = 759
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+ +ISYG CQ PTLGF +R+ I F EP+W L
Sbjct: 208 SQVISYGSCQFPTLGFVTDRYKMIENFVSEPFWKL 242
>gi|294892870|ref|XP_002774271.1| prokaryotic dna topoisomerase, putative [Perkinsus marinus ATCC
50983]
gi|239879497|gb|EER06087.1| prokaryotic dna topoisomerase, putative [Perkinsus marinus ATCC
50983]
Length = 956
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
++SYGPCQ PTLGF V+R R F EP+W + T++
Sbjct: 433 ILSYGPCQFPTLGFVVQRWLLQRNFIREPFWTIKCTVS 470
>gi|430813900|emb|CCJ28786.1| unnamed protein product [Pneumocystis jirovecii]
Length = 597
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L ++SYG CQ PTLGF V+R +I F PE +W
Sbjct: 215 LAKEIVSYGSCQFPTLGFVVDRWKRIENFVPEKFW 249
>gi|255572920|ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
Length = 833
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++SYGPCQ PTLGF VER+ +I++ + E +W ++ +
Sbjct: 213 VLSYGPCQFPTLGFIVERYWEIQSHESEEFWTINCS 248
>gi|292611936|ref|XP_688695.4| PREDICTED: DNA topoisomerase 3-alpha [Danio rerio]
Length = 998
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
L LISYG CQ PTLGF VER I+ F PE ++ + + N E
Sbjct: 231 LSDQLISYGSCQFPTLGFVVERFKAIQAFIPETFFKIKVVHEPNEE 276
>gi|373461140|ref|ZP_09552886.1| DNA topoisomerase III [Prevotella maculosa OT 289]
gi|371953470|gb|EHO71294.1| DNA topoisomerase III [Prevotella maculosa OT 289]
Length = 704
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKPEPYWVL 218
>gi|300706240|ref|XP_002995407.1| hypothetical protein NCER_101713 [Nosema ceranae BRL01]
gi|239604490|gb|EEQ81736.1| hypothetical protein NCER_101713 [Nosema ceranae BRL01]
Length = 805
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+IS+GPCQ PTLGF +ER +I FK E ++ L++ +
Sbjct: 195 VISFGPCQIPTLGFVIERFFQIEKFKEEDFYSLEINI 231
>gi|383811530|ref|ZP_09966995.1| DNA topoisomerase III [Prevotella sp. oral taxon 306 str. F0472]
gi|383355929|gb|EID33448.1| DNA topoisomerase III [Prevotella sp. oral taxon 306 str. F0472]
Length = 635
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 14 YQGKYGDLD---ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG ++S G QTPTL V+R ++I FKPEPYW+L
Sbjct: 176 YTLKYGRNSYGKGQILSIGRVQTPTLALIVKRQEEIDNFKPEPYWVL 222
>gi|339481941|ref|YP_004693727.1| DNA topoisomerase III [Nitrosomonas sp. Is79A3]
gi|338804086|gb|AEJ00328.1| DNA topoisomerase III [Nitrosomonas sp. Is79A3]
Length = 836
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-----NLNGEW 67
+ G QTPTL VER +KI+ F+P+ YW + T N NG+W
Sbjct: 192 TVGRVQTPTLAILVEREEKIKKFRPQDYWEIHATFAASNGNYNGKW 237
>gi|389852119|ref|YP_006354353.1| DNA topoisomerase I [Pyrococcus sp. ST04]
gi|388249425|gb|AFK22278.1| DNA topoisomerase I [Pyrococcus sp. ST04]
Length = 691
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I+ F P+PYW++ L NG+
Sbjct: 194 VLSTGRVQGPTLKFLVEREREIQNFVPKPYWIIKLVFEKNGK 235
>gi|410902017|ref|XP_003964491.1| PREDICTED: DNA topoisomerase 3-alpha-like [Takifugu rubripes]
Length = 967
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L LISYG CQ PTLGF VER I++F PE ++
Sbjct: 209 LANQLISYGSCQFPTLGFVVERFKAIQSFIPETFY 243
>gi|302687094|ref|XP_003033227.1| hypothetical protein SCHCODRAFT_54192 [Schizophyllum commune H4-8]
gi|300106921|gb|EFI98324.1| hypothetical protein SCHCODRAFT_54192 [Schizophyllum commune H4-8]
Length = 611
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+ +ISYG CQ PTLGF V R ++++F PE + + LT+ G
Sbjct: 202 SHVISYGSCQFPTLGFVVNRFKQVKSFVPEDFSYIHLTIKAPG 244
>gi|325958291|ref|YP_004289757.1| DNA topoisomerase i [Methanobacterium sp. AL-21]
gi|325329723|gb|ADZ08785.1| DNA topoisomerase I [Methanobacterium sp. AL-21]
Length = 775
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+S G QTPTL VER +I+ F PEPYW++ L++ G
Sbjct: 194 LSAGRVQTPTLAILVEREKEIQKFIPEPYWMIKADLDVPG 233
>gi|168067139|ref|XP_001785482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662889|gb|EDQ49689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 915
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 18 YGDLDASLI-SYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+G+ D L+ SYGPCQ PTLGF VER+ +I+ E +W +
Sbjct: 205 FGEDDKKLVLSYGPCQFPTLGFVVERYWQIQAHVAEDFWAI 245
>gi|157116652|ref|XP_001658595.1| prokaryotic DNA topoisomerase [Aedes aegypti]
gi|108876378|gb|EAT40603.1| AAEL007683-PA [Aedes aegypti]
Length = 1021
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+L+SYG CQ PTLGF R+ +I F P+ +W + L
Sbjct: 228 NLVSYGSCQIPTLGFVAHRYKEIEKFIPQEFWKIKL 263
>gi|268572957|ref|XP_002641457.1| C. briggsae CBR-TOP-3 protein [Caenorhabditis briggsae]
Length = 753
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 19 GDLDAS-LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
G D+S +ISYG CQ PTLGF +R+ I F EP+W L
Sbjct: 203 GQSDSSKVISYGSCQFPTLGFVTDRYKLIENFISEPFWKL 242
>gi|366991737|ref|XP_003675634.1| hypothetical protein NCAS_0C02780 [Naumovozyma castellii CBS 4309]
gi|342301499|emb|CCC69268.1| hypothetical protein NCAS_0C02780 [Naumovozyma castellii CBS 4309]
Length = 663
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++SYG CQ PTLGF V+R ++I F E +W + L +
Sbjct: 236 IVSYGACQFPTLGFVVDRFERIENFVSEEFWYIQLQI 272
>gi|13540850|ref|NP_110538.1| DNA topoisomerase I [Thermoplasma volcanium GSS1]
gi|14324233|dbj|BAB59161.1| DNA topoisomerase 1 [Thermoplasma volcanium GSS1]
Length = 770
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEW 67
G L +S G QTPTL VER +I FKP+ +W + +T GE+
Sbjct: 187 GRLGRYFLSAGRVQTPTLAIVVEREREIENFKPQTFWTISITFQKEGEF 235
>gi|56477104|ref|YP_158693.1| DNA topoisomerase III [Aromatoleum aromaticum EbN1]
gi|56313147|emb|CAI07792.1| DNA topoisomerase III [Aromatoleum aromaticum EbN1]
Length = 857
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L + G QTPTL VER +KIR FKP YW L+ T
Sbjct: 190 LTTVGRVQTPTLAIVVEREEKIRRFKPRDYWELEATF 226
>gi|88802811|ref|ZP_01118338.1| DNA topoisomerase III [Polaribacter irgensii 23-P]
gi|88781669|gb|EAR12847.1| DNA topoisomerase III [Polaribacter irgensii 23-P]
Length = 781
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
LL LN Y K+G ++S G QTPTL V RH +I FKP+PYW L T
Sbjct: 167 LLGLNATRL-YTVKFGGYK-QVLSVGRVQTPTLAMIVNRHLEINDFKPQPYWELQTT 221
>gi|340356193|ref|ZP_08678850.1| DNA topoisomerase TopB [Sporosarcina newyorkensis 2681]
gi|339621644|gb|EGQ26194.1| DNA topoisomerase TopB [Sporosarcina newyorkensis 2681]
Length = 722
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
+ S G QTPTL V+R +I FK EP+W ++ NLNG+ ++
Sbjct: 194 VFSVGRVQTPTLALIVKREHEIANFKSEPFWEVEANFNLNGKTIT 238
>gi|336398367|ref|ZP_08579167.1| DNA topoisomerase III [Prevotella multisaccharivorax DSM 17128]
gi|336068103|gb|EGN56737.1| DNA topoisomerase III [Prevotella multisaccharivorax DSM 17128]
Length = 663
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y Y ++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 176 YTLMYRQQRGQVLSIGRVQTPTLALLVKRQKEIDNFKPEPYWML 219
>gi|298674695|ref|YP_003726445.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
gi|298287683|gb|ADI73649.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
Length = 772
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
++S GPCQTPT GF ER I+ F+P +W ++ N
Sbjct: 193 VLSIGPCQTPTCGFVYEREKAIKEFEPRDFWKIEAVFTHN 232
>gi|334332664|ref|XP_003341626.1| PREDICTED: DNA topoisomerase 3-alpha [Monodelphis domestica]
Length = 976
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 223 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPETFHKIKVT 262
>gi|88602302|ref|YP_502480.1| DNA topoisomerase [Methanospirillum hungatei JF-1]
gi|88187764|gb|ABD40761.1| DNA topoisomerase I [Methanospirillum hungatei JF-1]
Length = 931
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+++S G Q+PTL V+R +I +F PEPYW + LT +G+
Sbjct: 188 GNILSVGRVQSPTLAMIVDREKEIESFIPEPYWEISLTTEKDGQ 231
>gi|375255251|ref|YP_005014418.1| DNA topoisomerase [Tannerella forsythia ATCC 43037]
gi|363406232|gb|AEW19918.1| DNA topoisomerase [Tannerella forsythia ATCC 43037]
Length = 699
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V+R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVKRQKEIEAFKPEPYWEL 218
>gi|340346191|ref|ZP_08669317.1| DNA topoisomerase TopB [Prevotella dentalis DSM 3688]
gi|339612139|gb|EGQ16953.1| DNA topoisomerase TopB [Prevotella dentalis DSM 3688]
Length = 725
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +Y ++S G QTPTL V R +I F+PEPYW+L
Sbjct: 211 YTLRYRQQQGQVLSIGRVQTPTLALIVNRQKEIDQFRPEPYWVL 254
>gi|299141416|ref|ZP_07034553.1| DNA topoisomerase III [Prevotella oris C735]
gi|298577376|gb|EFI49245.1| DNA topoisomerase III [Prevotella oris C735]
Length = 704
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NKQVLSIGRVQTPTLALIVNRQKEIDHFKPEPYWVL 218
>gi|345305221|ref|XP_001510142.2| PREDICTED: DNA topoisomerase 3-alpha [Ornithorhynchus anatinus]
Length = 994
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 229 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPESFHKIKVT 268
>gi|429961669|gb|ELA41214.1| hypothetical protein VICG_01703 [Vittaforma corneae ATCC 50505]
Length = 791
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ ++IS+GPCQ PTL F V+RH +I F E Y+ L T+
Sbjct: 192 NGNVISFGPCQIPTLNFVVQRHIQIENFISEKYFSLQNTV 231
>gi|378755338|gb|EHY65365.1| hypothetical protein NERG_01811 [Nematocida sp. 1 ERTm2]
Length = 772
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
S+ISYG CQ PTLGF R + I F E W + + NGE
Sbjct: 198 SVISYGSCQIPTLGFICAREESIENFVEEKNWTIQADVQHNGE 240
>gi|281423522|ref|ZP_06254435.1| DNA topoisomerase III [Prevotella oris F0302]
gi|281402342|gb|EFB33173.1| DNA topoisomerase III [Prevotella oris F0302]
Length = 704
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLKYGQ-NKQVLSIGRVQTPTLALIVNRQKEIDHFKPEPYWVL 218
>gi|433651480|ref|YP_007277859.1| DNA topoisomerase III [Prevotella dentalis DSM 3688]
gi|433302013|gb|AGB27829.1| DNA topoisomerase III [Prevotella dentalis DSM 3688]
Length = 690
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +Y ++S G QTPTL V R +I F+PEPYW+L
Sbjct: 176 YTLRYRQQQGQVLSIGRVQTPTLALIVNRQKEIDQFRPEPYWVL 219
>gi|395517927|ref|XP_003763121.1| PREDICTED: DNA topoisomerase 3-alpha, partial [Sarcophilus
harrisii]
Length = 888
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 129 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPETFHKIKVT 168
>gi|333979815|ref|YP_004517760.1| DNA topoisomerase III [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823296|gb|AEG15959.1| DNA topoisomerase III [Desulfotomaculum kuznetsovii DSM 6115]
Length = 796
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+L+S G QTPTL V+R +IR FKPE YW + T +G
Sbjct: 183 TLLSVGRVQTPTLALVVQREREIRDFKPETYWEVRATFQKSG 224
>gi|337283960|ref|YP_004623434.1| DNA topoisomerase I [Pyrococcus yayanosii CH1]
gi|334899894|gb|AEH24162.1| DNA topoisomerase I [Pyrococcus yayanosii CH1]
Length = 1156
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G Q PTL F V+R +I+ F P+PYW++ L L NG
Sbjct: 194 VLSTGRVQGPTLKFLVDREREIQNFVPKPYWIIKLILEKNG 234
>gi|20090640|ref|NP_616715.1| DNA topoisomerase [Methanosarcina acetivorans C2A]
gi|19915684|gb|AAM05195.1| DNA topoisomerase, type I [Methanosarcina acetivorans C2A]
Length = 843
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++S GPCQTPT GF ER IR FK + +W
Sbjct: 193 ILSIGPCQTPTCGFVYEREKAIRAFKAKDFW 223
>gi|352682630|ref|YP_004893154.1| topoisomerase (DNA) III alpha [Thermoproteus tenax Kra 1]
gi|350275429|emb|CCC82076.1| topoisomerase (DNA) III alpha [Thermoproteus tenax Kra 1]
Length = 606
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 4 LLKLNLKEADYQG-KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
LL L ++E D + +G +SYGPCQTP LG V R + FKPE Y+++
Sbjct: 179 LLTLAVREVDNKALPFG----KFLSYGPCQTPVLGLVVSRELERLNFKPEEYYVV 229
>gi|344298058|ref|XP_003420711.1| PREDICTED: DNA topoisomerase 3-alpha [Loxodonta africana]
Length = 1006
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPETFHRIKVT 273
>gi|296201147|ref|XP_002747908.1| PREDICTED: DNA topoisomerase 3-alpha [Callithrix jacchus]
Length = 931
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LSEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|242398970|ref|YP_002994394.1| DNA topoisomerase I [Thermococcus sibiricus MM 739]
gi|242265363|gb|ACS90045.1| DNA topoisomerase I [Thermococcus sibiricus MM 739]
Length = 1228
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I F P PYW++ + L NGE
Sbjct: 195 VLSTGRVQGPTLKFLVDREKEIENFVPTPYWVIKMILEKNGE 236
>gi|407695967|ref|YP_006820755.1| DNA topoisomerase III [Alcanivorax dieselolei B5]
gi|407253305|gb|AFT70412.1| DNA topoisomerase III [Alcanivorax dieselolei B5]
Length = 711
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+ A YQG ++S G QTPTL V+R I FKP PYW + TL+ G
Sbjct: 182 RNAGYQG--------VLSVGRVQTPTLRLVVDRDRAIEAFKPSPYWTITSTLSAQG 229
>gi|431914498|gb|ELK15748.1| DNA topoisomerase 3-alpha [Pteropus alecto]
Length = 1007
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I++F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQSFVPEIFHKIKVT 273
>gi|74140438|dbj|BAE42369.1| unnamed protein product [Mus musculus]
gi|74213102|dbj|BAE41691.1| unnamed protein product [Mus musculus]
Length = 773
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 209 LAGQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 248
>gi|393785201|ref|ZP_10373354.1| DNA topoisomerase III [Bacteroides salyersiae CL02T12C01]
gi|392662904|gb|EIY56459.1| DNA topoisomerase III [Bacteroides salyersiae CL02T12C01]
Length = 687
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTIKYGQ-NKQVLSIGRVQTPTLALIVNRQLEIENFKPEPYWEL 218
>gi|348511454|ref|XP_003443259.1| PREDICTED: DNA topoisomerase 3-alpha [Oreochromis niloticus]
Length = 1054
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L LISYG CQ PTLGF VER I+ F PE ++
Sbjct: 251 LANQLISYGSCQFPTLGFVVERFKAIQAFIPETFY 285
>gi|392351278|ref|XP_002742497.2| PREDICTED: DNA topoisomerase 3-alpha [Rattus norvegicus]
Length = 977
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVT 273
>gi|109490882|ref|XP_001077625.1| PREDICTED: DNA topoisomerase 3-alpha [Rattus norvegicus]
Length = 735
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVT 273
>gi|432871570|ref|XP_004071982.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryzias latipes]
Length = 987
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
L L+SYG CQ PTLGF VER I+ F PE ++ + + L + V
Sbjct: 252 LANQLVSYGSCQFPTLGFVVERFKAIKAFIPETFYKIKVLHTLEDDTV 299
>gi|430743386|ref|YP_007202515.1| DNA topoisomerase III [Singulisphaera acidiphila DSM 18658]
gi|430015106|gb|AGA26820.1| DNA topoisomerase III [Singulisphaera acidiphila DSM 18658]
Length = 808
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L S G QTP L V R D+IRTFKPEP+W
Sbjct: 187 LWSVGRVQTPVLAMIVRRDDEIRTFKPEPFW 217
>gi|330998296|ref|ZP_08322121.1| DNA topoisomerase [Paraprevotella xylaniphila YIT 11841]
gi|329568685|gb|EGG50486.1| DNA topoisomerase [Paraprevotella xylaniphila YIT 11841]
Length = 768
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V R +I FKPEPYW+L
Sbjct: 219 VLSIGRVQTPTLALIVNRQQEIENFKPEPYWVL 251
>gi|444525410|gb|ELV14017.1| DNA topoisomerase 3-alpha [Tupaia chinensis]
Length = 967
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPY 54
L LISYG CQ PTLGF VER I+ F PE +
Sbjct: 214 LTEQLISYGSCQFPTLGFVVERFKAIQAFVPETF 247
>gi|307103756|gb|EFN52014.1| hypothetical protein CHLNCDRAFT_27302 [Chlorella variabilis]
Length = 307
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 13 DYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D+ GD L+SYGPCQ PTLG V+R +I+ PE +W + +
Sbjct: 196 DWGEMAGDNGRVLLSYGPCQFPTLGLIVQRAWEIQAHIPENFWYIQV 242
>gi|354467838|ref|XP_003496375.1| PREDICTED: DNA topoisomerase 3-alpha [Cricetulus griseus]
gi|344245173|gb|EGW01277.1| DNA topoisomerase 3-alpha [Cricetulus griseus]
Length = 1004
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVT 273
>gi|325281597|ref|YP_004254139.1| DNA topoisomerase III [Odoribacter splanchnicus DSM 20712]
gi|324313406|gb|ADY33959.1| DNA topoisomerase III [Odoribacter splanchnicus DSM 20712]
Length = 709
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
LL +N A Y KYG +++S G QTPTL VER I FKPE YW
Sbjct: 167 LLGMNATRA-YTLKYGT-GKNVLSIGRVQTPTLALVVERQKAIENFKPETYW 216
>gi|409045159|gb|EKM54640.1| hypothetical protein PHACADRAFT_97897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 705
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
GD+ + + GPCQ PTLGF V R++++++F E +W + L L
Sbjct: 200 GDVISYGSTIGPCQFPTLGFVVSRYNQVKSFVSETFWHIYLAL 242
>gi|6678403|ref|NP_033436.1| DNA topoisomerase 3-alpha [Mus musculus]
gi|6686029|sp|O70157.1|TOP3A_MOUSE RecName: Full=DNA topoisomerase 3-alpha; AltName: Full=DNA
topoisomerase III alpha
gi|3061308|dbj|BAA25662.1| topoisomerase III [Mus musculus]
gi|71043442|gb|AAH99689.1| Topoisomerase (DNA) III alpha [Mus musculus]
Length = 1003
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 273
>gi|74186931|dbj|BAE20515.1| unnamed protein product [Mus musculus]
Length = 954
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 273
>gi|424513003|emb|CCO66587.1| predicted protein [Bathycoccus prasinos]
Length = 751
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++ISYGPCQ PTLGF V+R + PE +W + +
Sbjct: 268 TVISYGPCQFPTLGFIVQRKWDVDAHVPEKFWTISI 303
>gi|26325928|dbj|BAC26718.1| unnamed protein product [Mus musculus]
Length = 839
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 119 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 158
>gi|74216779|dbj|BAE37792.1| unnamed protein product [Mus musculus]
Length = 694
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 273
>gi|417405552|gb|JAA49485.1| Putative dna topoisomerase iii beta [Desmodus rotundus]
Length = 999
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 273
>gi|296109817|ref|YP_003616766.1| DNA topoisomerase I [methanocaldococcus infernus ME]
gi|295434631|gb|ADG13802.1| DNA topoisomerase I [Methanocaldococcus infernus ME]
Length = 776
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D ++S G Q PTL F ER +I+ FKP+PYW+L+ L
Sbjct: 184 DWKILSIGRVQGPTLYFLAEREKEIKEFKPKPYWILEAYL 223
>gi|18976866|ref|NP_578223.1| DNA topoisomerase I [Pyrococcus furiosus DSM 3638]
gi|397650999|ref|YP_006491580.1| DNA topoisomerase I [Pyrococcus furiosus COM1]
gi|18266792|sp|O73954.2|TOP1_PYRFU RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Omega-protein; AltName: Full=Relaxing
enzyme; AltName: Full=Swivelase; AltName:
Full=Untwisting enzyme; Contains: RecName:
Full=Endonuclease PI-PfuI; AltName: Full=Pfu topA intein
gi|18892473|gb|AAL80618.1| DNA topoisomerase I [Pyrococcus furiosus DSM 3638]
gi|393188590|gb|AFN03288.1| DNA topoisomerase I [Pyrococcus furiosus COM1]
Length = 1060
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I++F P+PYW++ L NG+
Sbjct: 194 VLSTGRVQGPTLKFLVDREREIQSFVPQPYWVIKLIFEKNGK 235
>gi|395836299|ref|XP_003791095.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha [Otolemur
garnettii]
Length = 1008
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPY 54
L LISYG CQ PTLGF VER I+ F PE +
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEAF 267
>gi|359406719|ref|ZP_09199384.1| DNA topoisomerase [Prevotella stercorea DSM 18206]
gi|357555235|gb|EHJ36908.1| DNA topoisomerase [Prevotella stercorea DSM 18206]
Length = 702
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I +F PEPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDSFVPEPYWVL 218
>gi|402898997|ref|XP_003912493.1| PREDICTED: DNA topoisomerase 3-alpha [Papio anubis]
Length = 998
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|375013063|ref|YP_004990051.1| DNA topoisomerase III [Owenweeksia hongkongensis DSM 17368]
gi|359348987|gb|AEV33406.1| DNA topoisomerase III [Owenweeksia hongkongensis DSM 17368]
Length = 771
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
KYG ++S G QTPTL V RH +I FKP+PYW L
Sbjct: 179 KYG-APKQVLSIGRVQTPTLAMLVNRHHEIENFKPQPYWELQ 219
>gi|73956193|ref|XP_546656.2| PREDICTED: DNA topoisomerase 3-alpha [Canis lupus familiaris]
Length = 989
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVT 273
>gi|351707720|gb|EHB10639.1| DNA topoisomerase 3-alpha [Heterocephalus glaber]
Length = 991
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|338711250|ref|XP_001918241.2| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
[Equus caballus]
Length = 987
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 214 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVT 253
>gi|15679619|ref|NP_276736.1| DNA topoisomerase I [Methanothermobacter thermautotrophicus str.
Delta H]
gi|14423958|sp|O27661.1|TOP1_METTH RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Omega-protein; AltName: Full=Relaxing
enzyme; AltName: Full=Swivelase; AltName:
Full=Untwisting enzyme
gi|2622750|gb|AAB86097.1| DNA topoisomerase I [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 718
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL VER +IR FKP PYW++
Sbjct: 201 LSAGRVQTPTLAILVEREKEIRDFKPVPYWII 232
>gi|426237677|ref|XP_004012784.1| PREDICTED: DNA topoisomerase 3-alpha [Ovis aries]
Length = 1002
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVT 273
>gi|410980097|ref|XP_003996416.1| PREDICTED: DNA topoisomerase 3-alpha [Felis catus]
Length = 987
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVT 273
>gi|301775497|ref|XP_002923167.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
[Ailuropoda melanoleuca]
Length = 959
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVT 273
>gi|297272081|ref|XP_001095437.2| PREDICTED: DNA topoisomerase 3-alpha [Macaca mulatta]
Length = 976
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|260801483|ref|XP_002595625.1| hypothetical protein BRAFLDRAFT_56938 [Branchiostoma floridae]
gi|229280872|gb|EEN51637.1| hypothetical protein BRAFLDRAFT_56938 [Branchiostoma floridae]
Length = 346
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L +ISYG CQ PTLGF VER+ I+ F PE + L ++
Sbjct: 206 LSDQVISYGSCQFPTLGFVVERYKAIQNFIPEMFHKLKVS 245
>gi|348560295|ref|XP_003465949.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cavia porcellus]
Length = 1002
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|397476895|ref|XP_003809826.1| PREDICTED: DNA topoisomerase 3-alpha isoform 1 [Pan paniscus]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|417412874|gb|JAA52796.1| Putative dna topoisomerase iii alpha, partial [Desmodus rotundus]
Length = 837
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 72 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVT 111
>gi|383412619|gb|AFH29523.1| DNA topoisomerase 3-alpha [Macaca mulatta]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|426349252|ref|XP_004042226.1| PREDICTED: DNA topoisomerase 3-alpha [Gorilla gorilla gorilla]
Length = 976
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|10835218|ref|NP_004609.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|2501242|sp|Q13472.1|TOP3A_HUMAN RecName: Full=DNA topoisomerase 3-alpha; AltName: Full=DNA
topoisomerase III alpha
gi|1292912|gb|AAB03694.1| DNA topoisomerase III [Homo sapiens]
gi|30353789|gb|AAH51748.1| Topoisomerase (DNA) III alpha [Homo sapiens]
gi|119576050|gb|EAW55646.1| topoisomerase (DNA) III alpha, isoform CRA_a [Homo sapiens]
gi|119576052|gb|EAW55648.1| topoisomerase (DNA) III alpha, isoform CRA_a [Homo sapiens]
gi|119576053|gb|EAW55649.1| topoisomerase (DNA) III alpha, isoform CRA_a [Homo sapiens]
gi|158259313|dbj|BAF85615.1| unnamed protein product [Homo sapiens]
gi|311347058|gb|ADP90454.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347060|gb|ADP90455.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347062|gb|ADP90456.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347064|gb|ADP90457.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347066|gb|ADP90458.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347068|gb|ADP90459.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347070|gb|ADP90460.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347072|gb|ADP90461.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347074|gb|ADP90462.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347076|gb|ADP90463.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347078|gb|ADP90464.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347080|gb|ADP90465.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347082|gb|ADP90466.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347084|gb|ADP90467.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347086|gb|ADP90468.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347088|gb|ADP90469.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347090|gb|ADP90470.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347092|gb|ADP90471.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347094|gb|ADP90472.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347096|gb|ADP90473.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347098|gb|ADP90474.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347100|gb|ADP90475.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347102|gb|ADP90476.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347104|gb|ADP90477.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347106|gb|ADP90478.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347108|gb|ADP90479.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347110|gb|ADP90480.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347112|gb|ADP90481.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347114|gb|ADP90482.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347116|gb|ADP90483.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347118|gb|ADP90484.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347120|gb|ADP90485.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347122|gb|ADP90486.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347124|gb|ADP90487.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347126|gb|ADP90488.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347128|gb|ADP90489.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347130|gb|ADP90490.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347132|gb|ADP90491.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347134|gb|ADP90492.1| DNA topoisomerase 3-alpha [Homo sapiens]
gi|311347136|gb|ADP90493.1| DNA topoisomerase 3-alpha [Homo sapiens]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|380789899|gb|AFE66825.1| DNA topoisomerase 3-alpha [Macaca mulatta]
gi|380789901|gb|AFE66826.1| DNA topoisomerase 3-alpha [Macaca mulatta]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|355568310|gb|EHH24591.1| DNA topoisomerase 3-alpha [Macaca mulatta]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|332261726|ref|XP_003279918.1| PREDICTED: DNA topoisomerase 3-alpha isoform 1 [Nomascus
leucogenys]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|114668853|ref|XP_511323.2| PREDICTED: DNA topoisomerase 3-alpha isoform 3 [Pan troglodytes]
gi|410209052|gb|JAA01745.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410209054|gb|JAA01746.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410209056|gb|JAA01747.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410258364|gb|JAA17149.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410258366|gb|JAA17150.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410258368|gb|JAA17151.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410258370|gb|JAA17152.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410293004|gb|JAA25102.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410293006|gb|JAA25103.1| topoisomerase (DNA) III alpha [Pan troglodytes]
gi|410341687|gb|JAA39790.1| topoisomerase (DNA) III alpha [Pan troglodytes]
Length = 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|440913082|gb|ELR62586.1| DNA topoisomerase 3-alpha [Bos grunniens mutus]
Length = 1002
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVT 273
>gi|1292913|gb|AAB03695.1| DNA topoisomerase III [Homo sapiens]
Length = 976
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 209 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 248
>gi|410722055|ref|ZP_11361370.1| DNA topoisomerase I, archaeal [Methanobacterium sp. Maddingley
MBC34]
gi|410597861|gb|EKQ52468.1| DNA topoisomerase I, archaeal [Methanobacterium sp. Maddingley
MBC34]
Length = 718
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL VER +I++F PEPYWL+
Sbjct: 194 LSAGRVQTPTLAILVEREKEIQSFIPEPYWLI 225
>gi|397476897|ref|XP_003809827.1| PREDICTED: DNA topoisomerase 3-alpha isoform 2 [Pan paniscus]
Length = 906
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 139 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 178
>gi|288931982|ref|YP_003436042.1| DNA topoisomerase I [Ferroglobus placidus DSM 10642]
gi|288894230|gb|ADC65767.1| DNA topoisomerase I [Ferroglobus placidus DSM 10642]
Length = 653
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G L +S G Q+PTL V+R +IR FKPEPYW
Sbjct: 180 GRLGRDFLSAGRVQSPTLRIIVDREKEIREFKPEPYW 216
>gi|408382419|ref|ZP_11179963.1| DNA topoisomerase I [Methanobacterium formicicum DSM 3637]
gi|407814774|gb|EKF85397.1| DNA topoisomerase I [Methanobacterium formicicum DSM 3637]
Length = 718
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL VER +I++F PEPYWL+
Sbjct: 194 LSAGRVQTPTLAILVEREKEIQSFIPEPYWLI 225
>gi|410051780|ref|XP_003953166.1| PREDICTED: DNA topoisomerase 3-alpha [Pan troglodytes]
Length = 906
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 139 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 178
>gi|296476590|tpg|DAA18705.1| TPA: topoisomerase (DNA) III alpha [Bos taurus]
Length = 1002
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVT 273
>gi|355753822|gb|EHH57787.1| DNA topoisomerase 3-alpha, partial [Macaca fascicularis]
Length = 839
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 72 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 111
>gi|332261728|ref|XP_003279919.1| PREDICTED: DNA topoisomerase 3-alpha isoform 2 [Nomascus
leucogenys]
Length = 906
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 139 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 178
>gi|194383072|dbj|BAG59092.1| unnamed protein product [Homo sapiens]
Length = 906
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 139 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 178
>gi|375082250|ref|ZP_09729318.1| DNA topoisomerase I [Thermococcus litoralis DSM 5473]
gi|374743138|gb|EHR79508.1| DNA topoisomerase I [Thermococcus litoralis DSM 5473]
Length = 840
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I F P PYW++ + L NG+
Sbjct: 195 VLSTGRVQGPTLKFLVEREREIANFVPTPYWVIKMILEKNGQ 236
>gi|118151044|ref|NP_001071443.1| DNA topoisomerase 3-alpha [Bos taurus]
gi|117306502|gb|AAI26548.1| Topoisomerase (DNA) III alpha [Bos taurus]
Length = 1002
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVT 273
>gi|357060489|ref|ZP_09121257.1| hypothetical protein HMPREF9332_00814 [Alloprevotella rava F0323]
gi|355375794|gb|EHG23062.1| hypothetical protein HMPREF9332_00814 [Alloprevotella rava F0323]
Length = 727
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 14 YQGKYG--DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + A+ +S G QTPTL V R +I F PEPYW+L
Sbjct: 213 YTLKYGRRERGATPLSIGRVQTPTLALIVNRQHEIDNFTPEPYWVL 258
>gi|343420008|emb|CCD19226.1| DNA topoisomerase III, putative, (fragment) [Trypanosoma vivax
Y486]
Length = 601
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R + R F PE Y+ L L
Sbjct: 153 VLSFGPCQIPTLGFVVRRSWEQREFVPEEYFTLAL 187
>gi|372210297|ref|ZP_09498099.1| DNA topoisomerase III [Flavobacteriaceae bacterium S85]
Length = 771
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
Y KYG D ++S G QTPTL V+R +I+ FKP+PYW
Sbjct: 176 YTLKYGR-DKQVLSVGRVQTPTLAMVVKRFLEIQNFKPQPYW 216
>gi|169806308|ref|XP_001827899.1| DNA topoisomerase III [Enterocytozoon bieneusi H348]
gi|161779347|gb|EDQ31370.1| DNA topoisomerase III [Enterocytozoon bieneusi H348]
Length = 722
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+ISYG CQ PTL F V+RH +I +F PE ++ + + +N + E++
Sbjct: 198 IISYGQCQIPTLNFVVQRHKEIVSFIPEKFYSISI-INKSNEFL 240
>gi|403275443|ref|XP_003929454.1| PREDICTED: DNA topoisomerase 3-alpha [Saimiri boliviensis
boliviensis]
Length = 923
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F PE + + +T
Sbjct: 234 LAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVT 273
>gi|423720138|ref|ZP_17694320.1| DNA topoisomerase III [Geobacillus thermoglucosidans TNO-09.020]
gi|383366900|gb|EID44185.1| DNA topoisomerase III [Geobacillus thermoglucosidans TNO-09.020]
Length = 718
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL F V+R +I F+PEP+W + +NG+
Sbjct: 194 VFSVGRVQTPTLAFIVKREKEIEQFRPEPFWEVVAAFAVNGK 235
>gi|355572493|ref|ZP_09043605.1| DNA topoisomerase [Methanolinea tarda NOBI-1]
gi|354824533|gb|EHF08778.1| DNA topoisomerase [Methanolinea tarda NOBI-1]
Length = 946
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
A+++S G Q+PTL V+R +I FKPE YW L L GE
Sbjct: 188 ANILSVGRVQSPTLAMIVDREREIEAFKPEKYWQLRLLTGKGGE 231
>gi|332877827|ref|ZP_08445565.1| DNA topoisomerase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357045479|ref|ZP_09107115.1| DNA topoisomerase [Paraprevotella clara YIT 11840]
gi|332684122|gb|EGJ56981.1| DNA topoisomerase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355531677|gb|EHH01074.1| DNA topoisomerase [Paraprevotella clara YIT 11840]
Length = 735
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V R +I+ FKPEPYW+L
Sbjct: 186 VLSIGRVQTPTLALIVNRQLEIKNFKPEPYWVL 218
>gi|312111139|ref|YP_003989455.1| DNA topoisomerase III [Geobacillus sp. Y4.1MC1]
gi|336235587|ref|YP_004588203.1| DNA topoisomerase III [Geobacillus thermoglucosidasius C56-YS93]
gi|311216240|gb|ADP74844.1| DNA topoisomerase III [Geobacillus sp. Y4.1MC1]
gi|335362442|gb|AEH48122.1| DNA topoisomerase III [Geobacillus thermoglucosidasius C56-YS93]
Length = 718
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL F V+R +I F+PEP+W + +NG+
Sbjct: 194 VFSVGRVQTPTLAFIVKREKEIEQFRPEPFWEVVAAFAVNGK 235
>gi|402301393|ref|ZP_10820747.1| DNA topoisomerase III [Bacillus alcalophilus ATCC 27647]
gi|401723507|gb|EJS96975.1| DNA topoisomerase III [Bacillus alcalophilus ATCC 27647]
Length = 235
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL +R + IR FKP+PYWLL
Sbjct: 186 LSCGRVQTPTLAMIAKREEDIRQFKPKPYWLL 217
>gi|260590777|ref|ZP_05856235.1| DNA topoisomerase III [Prevotella veroralis F0319]
gi|260537263|gb|EEX19880.1| DNA topoisomerase III [Prevotella veroralis F0319]
Length = 635
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V+R +I FKPEPYW+L
Sbjct: 188 GQVLSIGRVQTPTLALIVQRQKEIDNFKPEPYWVL 222
>gi|86133349|ref|ZP_01051931.1| DNA topoisomerase III [Polaribacter sp. MED152]
gi|85820212|gb|EAQ41359.1| DNA topoisomerase III [Polaribacter sp. MED152]
Length = 771
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Y K+G ++S G QTPTL V R+ +I+ FKP+PYW L T
Sbjct: 176 YTVKFGGY-KQVLSVGRVQTPTLAMLVNRYHEIQNFKPQPYWELQTT 221
>gi|343424117|emb|CCD17943.1| DNA topoisomerase III, putative [Trypanosoma vivax Y486]
Length = 726
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R + R F PE Y+ L L
Sbjct: 90 VLSFGPCQIPTLGFVVRRSWEQRGFVPEEYFTLAL 124
>gi|261879241|ref|ZP_06005668.1| DNA topoisomerase TopB [Prevotella bergensis DSM 17361]
gi|270334070|gb|EFA44856.1| DNA topoisomerase TopB [Prevotella bergensis DSM 17361]
Length = 688
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y YG + ++S G QTPTL V R +I FKPEPYW+L
Sbjct: 176 YTLMYGR-NRQVLSVGRVQTPTLALIVNRQKEIDNFKPEPYWVL 218
>gi|3309559|gb|AAC26106.1| DNA topoisomerase I [Pyrococcus furiosus]
Length = 934
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I++ P+PYW++ L NGE
Sbjct: 68 VLSTGRVQGPTLKFLVDREREIQSLVPQPYWVIKLIFEKNGE 109
>gi|307565560|ref|ZP_07628040.1| DNA topoisomerase [Prevotella amnii CRIS 21A-A]
gi|307345719|gb|EFN91076.1| DNA topoisomerase [Prevotella amnii CRIS 21A-A]
Length = 621
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 14 YQGKYGD----LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG+ ++S G QTPTL V+R +I FKP+P+W+L
Sbjct: 176 YTIKYGNNQYGKKPQVLSIGRVQTPTLALIVQRQKEINNFKPQPFWVL 223
>gi|300726776|ref|ZP_07060206.1| DNA topoisomerase III [Prevotella bryantii B14]
gi|299775889|gb|EFI72469.1| DNA topoisomerase III [Prevotella bryantii B14]
Length = 694
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I F+PEPYW+L
Sbjct: 176 YTLKYG-RNQQVLSIGRVQTPTLALIVNRQKEIDNFEPEPYWVL 218
>gi|257075816|ref|ZP_05570177.1| DNA topoisomerase I [Ferroplasma acidarmanus fer1]
Length = 748
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
IS G QTPTL VER ++I++F PE Y+++++T N
Sbjct: 180 FISVGRVQTPTLALIVEREEEIKSFVPEKYFVINVTFN 217
>gi|73669624|ref|YP_305639.1| DNA topoisomerase, type I [Methanosarcina barkeri str. Fusaro]
gi|72396786|gb|AAZ71059.1| DNA topoisomerase, type I [Methanosarcina barkeri str. Fusaro]
Length = 855
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++S GPCQTPT GF ER IR F+ + +W
Sbjct: 193 ILSIGPCQTPTCGFVYEREKAIRAFQAKDFW 223
>gi|51892810|ref|YP_075501.1| DNA topoisomerase III [Symbiobacterium thermophilum IAM 14863]
gi|51856499|dbj|BAD40657.1| DNA topoisomerase III [Symbiobacterium thermophilum IAM 14863]
Length = 783
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L+ +N A + K+G+L +S G QTPTL V R +I +F+PEPYW
Sbjct: 168 LVGINATRA-FTVKFGEL----LSAGRVQTPTLAMVVRREREIESFRPEPYW 214
>gi|327287266|ref|XP_003228350.1| PREDICTED: DNA topoisomerase 3-alpha-like [Anolis carolinensis]
Length = 997
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
L LISYG CQ PTLGF VER I+ F E ++ + +T
Sbjct: 238 LAEQLISYGSCQFPTLGFVVERFKAIQAFVAETFYKIKVT 277
>gi|358635107|dbj|BAL22404.1| DNA topoisomerase III [Azoarcus sp. KH32C]
Length = 877
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L + G QTPTL VER KIR FKP YW L+ +
Sbjct: 199 LTTVGRVQTPTLAIVVEREQKIRQFKPRDYWELEASF 235
>gi|410100631|ref|ZP_11295589.1| DNA topoisomerase III [Parabacteroides goldsteinii CL02T12C30]
gi|409215197|gb|EKN08202.1| DNA topoisomerase III [Parabacteroides goldsteinii CL02T12C30]
Length = 690
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTIRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|167390327|ref|XP_001739303.1| DNA topoisomerase 3-alpha [Entamoeba dispar SAW760]
gi|165897077|gb|EDR24345.1| DNA topoisomerase 3-alpha, putative [Entamoeba dispar SAW760]
Length = 607
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ K L+ ++SYG CQ PTLGF V+R+ +I+ F E ++ ++ + N
Sbjct: 196 KNKSKALEGKVLSYGACQFPTLGFVVDRYYQIKAFTKETFYKINCVVEKN 245
>gi|304313985|ref|YP_003849132.1| DNA topoisomerase I [Methanothermobacter marburgensis str. Marburg]
gi|302587444|gb|ADL57819.1| DNA topoisomerase I [Methanothermobacter marburgensis str. Marburg]
Length = 711
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+S G QTPTL VER +IR F+P PYW++ L
Sbjct: 194 LSAGRVQTPTLAILVEREKEIREFEPVPYWIIQAEL 229
>gi|288927281|ref|ZP_06421128.1| DNA topoisomerase III [Prevotella sp. oral taxon 317 str. F0108]
gi|288330115|gb|EFC68699.1| DNA topoisomerase III [Prevotella sp. oral taxon 317 str. F0108]
Length = 693
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPE YW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKPEAYWVL 218
>gi|260911183|ref|ZP_05917787.1| DNA topoisomerase TopB [Prevotella sp. oral taxon 472 str. F0295]
gi|260634713|gb|EEX52799.1| DNA topoisomerase TopB [Prevotella sp. oral taxon 472 str. F0295]
Length = 684
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPE YW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKPEAYWVL 218
>gi|298375104|ref|ZP_06985061.1| DNA topoisomerase III [Bacteroides sp. 3_1_19]
gi|298267604|gb|EFI09260.1| DNA topoisomerase III [Bacteroides sp. 3_1_19]
Length = 689
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 166 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 208
>gi|67624339|ref|XP_668452.1| DNA topoisomerase III [Cryptosporidium hominis TU502]
gi|54659676|gb|EAL38243.1| DNA topoisomerase III [Cryptosporidium hominis]
Length = 498
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+SYG CQ PTLGF V R+ KI F+ E W + L + +
Sbjct: 253 LSYGTCQFPTLGFVVSRYKKIINFREEDEWTITLEVKM 290
>gi|126649179|ref|XP_001388262.1| DNA topoisomerase III [Cryptosporidium parvum Iowa II]
gi|126117184|gb|EAZ51284.1| DNA topoisomerase III, putative [Cryptosporidium parvum Iowa II]
Length = 814
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
+SYG CQ PTLGF V R+ KI F+ E W + L + +
Sbjct: 252 LSYGTCQFPTLGFVVSRYKKIINFREEDEWTITLEVKM 289
>gi|256839395|ref|ZP_05544904.1| DNA topoisomerase I [Parabacteroides sp. D13]
gi|256738325|gb|EEU51650.1| DNA topoisomerase I [Parabacteroides sp. D13]
Length = 712
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 187 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 229
>gi|407035752|gb|EKE37830.1| DNA topoisomerase domain containing protein [Entamoeba nuttalli
P19]
Length = 607
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ K L+ ++SYG CQ PTLGF V+R+ +I+ F E ++ ++ + N
Sbjct: 196 KNKSKALEGKVLSYGACQFPTLGFVVDRYYQIKAFTKETFYKINCVVEKN 245
>gi|372487504|ref|YP_005027069.1| DNA topoisomerase III [Dechlorosoma suillum PS]
gi|359354057|gb|AEV25228.1| DNA topoisomerase III [Dechlorosoma suillum PS]
Length = 861
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-----NLNGEW 67
L + G QTPTL VER KIR FK PYW ++ T G+W
Sbjct: 190 LTTVGRVQTPTLSLVVERERKIREFKARPYWEVEATFAAAAGEYKGKW 237
>gi|67483198|ref|XP_656880.1| DNA topoisomerase III [Entamoeba histolytica HM-1:IMSS]
gi|56474106|gb|EAL51494.1| DNA topoisomerase III, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704214|gb|EMD44500.1| DNA topoisomerase alpha, putative [Entamoeba histolytica KU27]
Length = 607
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 15 QGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+ K L+ ++SYG CQ PTLGF V+R+ +I+ F E ++ ++ + N
Sbjct: 196 KNKSKALEGKVLSYGACQFPTLGFVVDRYYQIKAFTKETFYKINCVVEKN 245
>gi|449664549|ref|XP_004205945.1| PREDICTED: DNA topoisomerase 3-alpha-like [Hydra magnipapillata]
Length = 277
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L LISYG CQ PTLGF VER+ +++ F E ++
Sbjct: 209 LADQLISYGSCQFPTLGFVVERYKQVKEFLSEEFY 243
>gi|423332440|ref|ZP_17310224.1| DNA topoisomerase III [Parabacteroides distasonis CL03T12C09]
gi|409229189|gb|EKN22069.1| DNA topoisomerase III [Parabacteroides distasonis CL03T12C09]
Length = 697
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|255015472|ref|ZP_05287598.1| putative DNA topoisomerase [Bacteroides sp. 2_1_7]
gi|410101499|ref|ZP_11296427.1| DNA topoisomerase III [Parabacteroides sp. D25]
gi|409239297|gb|EKN32081.1| DNA topoisomerase III [Parabacteroides sp. D25]
Length = 697
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|150008318|ref|YP_001303061.1| DNA topoisomerase [Parabacteroides distasonis ATCC 8503]
gi|149936742|gb|ABR43439.1| putative DNA topoisomerase [Parabacteroides distasonis ATCC 8503]
Length = 698
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 177 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 219
>gi|452208804|ref|YP_007488918.1| DNA topoisomerase I [Methanosarcina mazei Tuc01]
gi|452098706|gb|AGF95646.1| DNA topoisomerase I [Methanosarcina mazei Tuc01]
Length = 832
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++S GPCQTPT GF ER IR F+ + +W
Sbjct: 193 VLSIGPCQTPTCGFVYEREKAIRAFEAKDFW 223
>gi|21226285|ref|NP_632207.1| DNA topoisomerase III [Methanosarcina mazei Go1]
gi|20904529|gb|AAM29879.1| DNA topoisomerase III [Methanosarcina mazei Go1]
Length = 832
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
++S GPCQTPT GF ER IR F+ + +W
Sbjct: 193 VLSIGPCQTPTCGFVYEREKAIRAFEAKDFW 223
>gi|315608877|ref|ZP_07883850.1| DNA topoisomerase TopB [Prevotella buccae ATCC 33574]
gi|315249404|gb|EFU29420.1| DNA topoisomerase TopB [Prevotella buccae ATCC 33574]
Length = 698
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FK EPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKSEPYWVL 218
>gi|301309174|ref|ZP_07215118.1| DNA topoisomerase III [Bacteroides sp. 20_3]
gi|423338905|ref|ZP_17316647.1| DNA topoisomerase III [Parabacteroides distasonis CL09T03C24]
gi|300832856|gb|EFK63482.1| DNA topoisomerase III [Bacteroides sp. 20_3]
gi|409233030|gb|EKN25871.1| DNA topoisomerase III [Parabacteroides distasonis CL09T03C24]
Length = 701
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|402307927|ref|ZP_10826944.1| DNA topoisomerase III [Prevotella sp. MSX73]
gi|400377533|gb|EJP30408.1| DNA topoisomerase III [Prevotella sp. MSX73]
Length = 698
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FK EPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKSEPYWVL 218
>gi|262384562|ref|ZP_06077696.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293855|gb|EEY81789.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 699
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|288926162|ref|ZP_06420089.1| DNA topoisomerase III [Prevotella buccae D17]
gi|288337054|gb|EFC75413.1| DNA topoisomerase III [Prevotella buccae D17]
Length = 702
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FK EPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFKSEPYWVL 218
>gi|386001200|ref|YP_005919499.1| DNA topoisomerase I [Methanosaeta harundinacea 6Ac]
gi|357209256|gb|AET63876.1| DNA topoisomerase I [Methanosaeta harundinacea 6Ac]
Length = 738
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G L +S G Q+PTL V+R +I FKP+PYW
Sbjct: 181 GRLGKGFLSVGRVQSPTLALIVDREKEIEAFKPQPYW 217
>gi|327310010|ref|YP_004336907.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
gi|326946489|gb|AEA11595.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
Length = 602
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 4 LLKLNLKEADYQG-KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
LL L+++ D +G +SYGPCQTP LG V R + FKPE Y+++ +
Sbjct: 179 LLTLSVRREDSSALPFG----KFLSYGPCQTPVLGLVVSRELERLNFKPEEYFVVRAVVG 234
Query: 63 LNG 65
G
Sbjct: 235 TGG 237
>gi|154492552|ref|ZP_02032178.1| hypothetical protein PARMER_02186 [Parabacteroides merdae ATCC
43184]
gi|423721994|ref|ZP_17696170.1| DNA topoisomerase III [Parabacteroides merdae CL09T00C40]
gi|154087777|gb|EDN86822.1| DNA topoisomerase [Parabacteroides merdae ATCC 43184]
gi|409243007|gb|EKN35766.1| DNA topoisomerase III [Parabacteroides merdae CL09T00C40]
Length = 692
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|218260005|ref|ZP_03475484.1| hypothetical protein PRABACTJOHN_01145 [Parabacteroides johnsonii
DSM 18315]
gi|423344374|ref|ZP_17322086.1| DNA topoisomerase III [Parabacteroides johnsonii CL02T12C29]
gi|218224788|gb|EEC97438.1| hypothetical protein PRABACTJOHN_01145 [Parabacteroides johnsonii
DSM 18315]
gi|409212772|gb|EKN05806.1| DNA topoisomerase III [Parabacteroides johnsonii CL02T12C29]
Length = 691
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEPYW L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWEL 218
>gi|196002305|ref|XP_002111020.1| hypothetical protein TRIADDRAFT_22834 [Trichoplax adhaerens]
gi|190586971|gb|EDV27024.1| hypothetical protein TRIADDRAFT_22834 [Trichoplax adhaerens]
Length = 625
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
L LISYG CQ PTLGF V R +I F E ++ + +TL+
Sbjct: 203 LKDQLISYGSCQFPTLGFVVSRFKEIDAFISEDFYKIKVTLD 244
>gi|282881632|ref|ZP_06290295.1| DNA topoisomerase [Prevotella timonensis CRIS 5C-B1]
gi|281304391|gb|EFA96488.1| DNA topoisomerase [Prevotella timonensis CRIS 5C-B1]
Length = 605
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPE YW+L
Sbjct: 176 YTLKYGK-NRQVLSIGRVQTPTLALIVNRQKEIDNFKPETYWVL 218
>gi|222445728|ref|ZP_03608243.1| hypothetical protein METSMIALI_01370 [Methanobrevibacter smithii
DSM 2375]
gi|261349724|ref|ZP_05975141.1| DNA topoisomerase [Methanobrevibacter smithii DSM 2374]
gi|222435293|gb|EEE42458.1| DNA topoisomerase I [Methanobrevibacter smithii DSM 2375]
gi|288861679|gb|EFC93977.1| DNA topoisomerase [Methanobrevibacter smithii DSM 2374]
Length = 716
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL V+R +I+ F PEPYWL+ L+
Sbjct: 196 LSAGRVQTPTLSILVDREKEIKKFVPEPYWLIKALLD 232
>gi|424939746|ref|ZP_18355509.1| DNA topoisomerase III [Pseudomonas aeruginosa NCMG1179]
gi|346056192|dbj|GAA16075.1| DNA topoisomerase III [Pseudomonas aeruginosa NCMG1179]
gi|453044625|gb|EME92348.1| DNA topoisomerase III [Pseudomonas aeruginosa PA21_ST175]
Length = 674
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I FK P+W +D++L+
Sbjct: 173 LFTLLGRQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSAPFWAIDVSLST 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 EGQAFSAQWVA 235
>gi|410669965|ref|YP_006922336.1| DNA topoisomerase [Methanolobus psychrophilus R15]
gi|409169093|gb|AFV22968.1| DNA topoisomerase [Methanolobus psychrophilus R15]
Length = 774
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+IS GPCQTPT GF ER I FK + +W ++ T +
Sbjct: 193 IISIGPCQTPTCGFVYEREKLILDFKSKDFWKIEGTFS 230
>gi|307354072|ref|YP_003895123.1| DNA topoisomerase I [Methanoplanus petrolearius DSM 11571]
gi|307157305|gb|ADN36685.1| DNA topoisomerase I [Methanoplanus petrolearius DSM 11571]
Length = 932
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
+++S G Q+PTL V+R +I F PEPYW++ L
Sbjct: 189 NILSVGRVQSPTLAMIVDREKEIEAFVPEPYWMISL 224
>gi|357037445|ref|ZP_09099245.1| DNA topoisomerase III [Desulfotomaculum gibsoniae DSM 7213]
gi|355361610|gb|EHG09365.1| DNA topoisomerase III [Desulfotomaculum gibsoniae DSM 7213]
Length = 791
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+L+S G QTPTL V R +I+ F PEPYW L
Sbjct: 183 TLLSIGRVQTPTLALIVNREREIKNFVPEPYWEL 216
>gi|160899584|ref|YP_001565166.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
gi|163858623|ref|YP_001632921.1| DNA topoisomerase III [Bordetella petrii DSM 12804]
gi|386019907|ref|YP_005937931.1| DNA topoisomerase III [Pseudomonas stutzeri DSM 4166]
gi|160365168|gb|ABX36781.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
gi|163262351|emb|CAP44654.1| DNA topoisomerase III [Bordetella petrii]
gi|327479879|gb|AEA83189.1| DNA topoisomerase III [Pseudomonas stutzeri DSM 4166]
Length = 670
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I FK P+W +D++L+
Sbjct: 173 LFTLLGRQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSAPFWAIDVSLST 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 EGQAFSAQWVA 235
>gi|409095789|ref|ZP_11215813.1| DNA topoisomerase I [Thermococcus zilligii AN1]
Length = 1233
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F VER +I++F P PY ++ + L NGE
Sbjct: 195 VLSTGRVQGPTLKFLVEREKEIQSFTPTPYGVIKMLLEKNGE 236
>gi|399218372|emb|CCF75259.1| unnamed protein product [Babesia microti strain RI]
Length = 603
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
D +ISYGPCQ PTLGF +R + F E +W + +
Sbjct: 202 DTKVISYGPCQLPTLGFVADRFFERENFVSEKFWYISV 239
>gi|441499377|ref|ZP_20981563.1| DNA topoisomerase III [Fulvivirga imtechensis AK7]
gi|441436910|gb|ELR70268.1| DNA topoisomerase III [Fulvivirga imtechensis AK7]
Length = 768
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG ++S G QTPTL V RH +I F P+PYW L
Sbjct: 176 YTLKYGGYK-QVLSIGRVQTPTLAMLVNRHYEIENFVPQPYWEL 218
>gi|225685385|ref|YP_002729787.1| DNA topoisomerase 1 (DNA topoisomerase I) (Omega-protein) (Relaxing
enzyme) (Untwisting enzyme) (Swivelase) [Persephonella
marina EX-H1]
gi|225646805|gb|ACO04990.1| DNA topoisomerase 1 (DNA topoisomerase I) (Omega-protein) (Relaxing
enzyme) (Untwisting enzyme) (Swivelase) [Persephonella
marina EX-H1]
Length = 834
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
D S+ S G QTP L VER +I+ FKP+PYW L+
Sbjct: 180 DGSVWSIGRVQTPVLKLIVERDLEIKNFKPKPYWQLE 216
>gi|145345003|ref|XP_001417013.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577239|gb|ABO95306.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 641
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EW 67
D S++SYGPCQ PTLGF V+R I E +W + + + G EW
Sbjct: 217 DKGKSIVSYGPCQFPTLGFIVQRKWDIDAHVSEDFWAIKCSHSREGTTTQFEW 269
>gi|300724460|ref|YP_003713781.1| DNA topoisomerase III [Xenorhabdus nematophila ATCC 19061]
gi|297630998|emb|CBJ91680.1| DNA topoisomerase III [Xenorhabdus nematophila ATCC 19061]
Length = 664
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 2 LDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++L +L +A QG +G++ +S G QTPTL V R + I F+P+PYW + TL
Sbjct: 169 INLTRLYTLKAQAQG-FGEV----LSIGRVQTPTLALVVNRDNDIARFEPKPYWQVVATL 223
Query: 62 NLNG 65
+G
Sbjct: 224 QKDG 227
>gi|333901948|ref|YP_004475821.1| DNA topoisomerase III [Pseudomonas fulva 12-X]
gi|333117213|gb|AEF23727.1| DNA topoisomerase III [Pseudomonas fulva 12-X]
Length = 649
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P P+W +D+T
Sbjct: 170 MSRLFTLLGRKSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVT 221
Query: 61 LNLNG 65
L+ NG
Sbjct: 222 LDGNG 226
>gi|282879245|ref|ZP_06287995.1| DNA topoisomerase [Prevotella buccalis ATCC 35310]
gi|281298638|gb|EFA91057.1| DNA topoisomerase [Prevotella buccalis ATCC 35310]
Length = 613
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPE YW+L
Sbjct: 176 YTLKYGR-NRQVLSIGRVQTPTLALIVSRQKEIDNFKPETYWVL 218
>gi|429738393|ref|ZP_19272203.1| DNA topoisomerase [Prevotella saccharolytica F0055]
gi|429160364|gb|EKY02832.1| DNA topoisomerase [Prevotella saccharolytica F0055]
Length = 701
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
Y KYG + ++S G QTPTL V R +I FKPE YW+L
Sbjct: 198 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQHEIDHFKPEAYWVLS 241
>gi|440300574|gb|ELP93021.1| DNA topoisomerase 3-alpha, putative [Entamoeba invadens IP1]
Length = 611
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D +ISYG CQ PTLGF ++R+ +I++F E ++
Sbjct: 205 DLKVISYGACQFPTLGFVIDRYYQIKSFTKEKFY 238
>gi|376262438|ref|YP_005149158.1| DNA topoisomerase III [Clostridium sp. BNL1100]
gi|373946432|gb|AEY67353.1| DNA topoisomerase III [Clostridium sp. BNL1100]
Length = 722
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL VER ++IR F+P+ YW + N
Sbjct: 186 LSAGRVQTPTLAMIVEREEEIRKFRPKDYWTISAQFN 222
>gi|326203772|ref|ZP_08193635.1| DNA topoisomerase III [Clostridium papyrosolvens DSM 2782]
gi|325986212|gb|EGD47045.1| DNA topoisomerase III [Clostridium papyrosolvens DSM 2782]
Length = 722
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL VER ++IR F+P+ YW + N
Sbjct: 186 LSAGRVQTPTLAMIVEREEEIRKFRPKDYWTISAQFN 222
>gi|325285855|ref|YP_004261645.1| DNA topoisomerase III [Cellulophaga lytica DSM 7489]
gi|324321309|gb|ADY28774.1| DNA topoisomerase III [Cellulophaga lytica DSM 7489]
Length = 766
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V R+ +I FKP+PYW L
Sbjct: 176 YTVKHGGYK-QMLSVGRVQTPTLAMIVNRYHEIENFKPQPYWEL 218
>gi|391328844|ref|XP_003738893.1| PREDICTED: DNA topoisomerase 3-alpha [Metaseiulus occidentalis]
Length = 689
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++ ++++SYG CQ PTLGF VER+ +I F+ E ++ +++
Sbjct: 199 RFSATRSNVLSYGSCQFPTLGFVVERYKEIDEFRAERFYKIEV 241
>gi|342186042|emb|CCC95527.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 913
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
++S+GPCQ PTLGF V R + + F PE Y+ L L N
Sbjct: 200 VLSFGPCQIPTLGFVVRRSWERKGFVPEDYFTLVLRHN 237
>gi|402468347|gb|EJW03513.1| hypothetical protein EDEG_00195 [Edhazardia aedis USNM 41457]
Length = 1086
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
S+ISYGPCQ PTLGF V+R + F E ++ L+L +
Sbjct: 190 GSVISYGPCQIPTLGFVVDRMLEKENFIGENFFTLNLII 228
>gi|220928360|ref|YP_002505269.1| DNA topoisomerase III [Clostridium cellulolyticum H10]
gi|219998688|gb|ACL75289.1| DNA topoisomerase III [Clostridium cellulolyticum H10]
Length = 722
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL VER ++IR F+P+ YW + N
Sbjct: 186 LSAGRVQTPTLAMIVEREEEIRKFRPKDYWTISAQFN 222
>gi|288801513|ref|ZP_06406965.1| DNA topoisomerase III [Prevotella sp. oral taxon 299 str. F0039]
gi|288331594|gb|EFC70080.1| DNA topoisomerase III [Prevotella sp. oral taxon 299 str. F0039]
Length = 676
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I +F EPYW+L
Sbjct: 176 YTLKYGQ-NKQVLSVGRVQTPTLALIVNRQKEIESFVSEPYWVL 218
>gi|282165112|ref|YP_003357497.1| DNA topoisomerase I [Methanocella paludicola SANAE]
gi|282157426|dbj|BAI62514.1| DNA topoisomerase I [Methanocella paludicola SANAE]
Length = 704
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G L S +S G QTP L V+R I+ F P PYW + T NGE
Sbjct: 180 GRLGNSFLSVGRVQTPLLALIVDREKDIKAFTPTPYWEIYATFT-NGE 226
>gi|403381286|ref|ZP_10923343.1| DNA topoisomerase III [Paenibacillus sp. JC66]
Length = 711
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-NLNGEW 67
+S G QTPTLG +E+ IR FKP YWLL + +W
Sbjct: 185 LSAGRVQTPTLGMIIEKEKAIRAFKPVDYWLLQADIGTFQAQW 227
>gi|288559648|ref|YP_003423134.1| DNA topoisomerase I TopA [Methanobrevibacter ruminantium M1]
gi|288542358|gb|ADC46242.1| DNA topoisomerase I TopA [Methanobrevibacter ruminantium M1]
Length = 741
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL V+R +I++F PEPYW++
Sbjct: 194 LSAGRVQTPTLSILVDREKEIQSFVPEPYWMI 225
>gi|333988062|ref|YP_004520669.1| DNA topoisomerase I [Methanobacterium sp. SWAN-1]
gi|333826206|gb|AEG18868.1| DNA topoisomerase I [Methanobacterium sp. SWAN-1]
Length = 787
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+S G QTPTL V+R +I+ F P PYWL+ L++ G
Sbjct: 194 LSAGRVQTPTLSILVDREKEIKEFIPVPYWLIKADLDVTG 233
>gi|254522475|ref|ZP_05134530.1| DNA topoisomerase III subfamily [Stenotrophomonas sp. SKA14]
gi|386064388|ref|YP_005979692.1| DNA topoisomerase III [Pseudomonas aeruginosa NCGM2.S1]
gi|219720066|gb|EED38591.1| DNA topoisomerase III subfamily [Stenotrophomonas sp. SKA14]
gi|348032947|dbj|BAK88307.1| DNA topoisomerase III [Pseudomonas aeruginosa NCGM2.S1]
Length = 670
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I FK P+W +D++L+
Sbjct: 173 LFTLLGRQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSA 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 EGQAFAAQWVA 235
>gi|71756203|ref|XP_829016.1| DNA topoisomerase III [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834402|gb|EAN79904.1| DNA topoisomerase III, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|144583728|gb|ABP01566.1| topoisomerase IIIalpha [Trypanosoma brucei brucei]
gi|261334956|emb|CBH17950.1| DNA topoisomerase III, putative [Trypanosoma brucei gambiense
DAL972]
Length = 918
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V+R + + F PE Y+ L L
Sbjct: 200 VLSFGPCQFPTLGFLVQRGWEQKGFVPEDYFTLTL 234
>gi|89101030|ref|ZP_01173872.1| DNA topoisomerase III [Bacillus sp. NRRL B-14911]
gi|89084262|gb|EAR63421.1| DNA topoisomerase III [Bacillus sp. NRRL B-14911]
Length = 579
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 196 VFSTGRVQTPTLALIVKREKEIENFKSEPFWEVMATFNMEGK 237
>gi|308801985|ref|XP_003078306.1| DNA topoisomerase III alpha, putative (ISS) [Ostreococcus tauri]
gi|116056757|emb|CAL53046.1| DNA topoisomerase III alpha, putative (ISS) [Ostreococcus tauri]
Length = 842
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 20 DLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
D S++SYGPCQ PTLGF V+R I E +W
Sbjct: 210 DKGKSIVSYGPCQFPTLGFIVQRKWDIDAHVSEDFW 245
>gi|261819943|ref|YP_003258049.1| DNA topoisomerase III [Pectobacterium wasabiae WPP163]
gi|261603956|gb|ACX86442.1| DNA topoisomerase III [Pectobacterium wasabiae WPP163]
Length = 669
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EWV 68
L+S G QTP L V R +I TF P+PYW + + L NG +WV
Sbjct: 187 LLSVGRVQTPVLAMVVNREREIATFVPKPYWQVWVALQSNGVRFSAQWV 235
>gi|116753908|ref|YP_843026.1| DNA topoisomerase I [Methanosaeta thermophila PT]
gi|116665359|gb|ABK14386.1| DNA topoisomerase I [Methanosaeta thermophila PT]
Length = 744
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G L +S G Q+PTL V+R +I +F+P+PYW
Sbjct: 181 GRLGKEFLSVGRVQSPTLALIVDREKEIESFQPKPYW 217
>gi|398870336|ref|ZP_10625677.1| DNA topoisomerase III [Pseudomonas sp. GM74]
gi|398208780|gb|EJM95482.1| DNA topoisomerase III [Pseudomonas sp. GM74]
Length = 651
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 173 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQ 224
Query: 61 LNLNG 65
L NG
Sbjct: 225 LQHNG 229
>gi|83589217|ref|YP_429226.1| DNA topoisomerase [Moorella thermoacetica ATCC 39073]
gi|83572131|gb|ABC18683.1| DNA topoisomerase [Moorella thermoacetica ATCC 39073]
Length = 689
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L+S G QTPTL V R +IR FKPEPY+
Sbjct: 86 LLSVGRVQTPTLALVVAREREIRAFKPEPYF 116
>gi|254198020|ref|ZP_04904442.1| DNA topoisomerase III [Burkholderia pseudomallei S13]
gi|169654761|gb|EDS87454.1| DNA topoisomerase III [Burkholderia pseudomallei S13]
Length = 676
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F P P+W ++L L+ NG+
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLRLVVDRDREIARFVPVPFWAVELALSSNGQ 227
>gi|384254048|gb|EIE27522.1| prokaryotic type I DNA topoisomerase [Coccomyxa subellipsoidea
C-169]
Length = 919
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+ SYGPCQ PTLG V+R +I+ EP+W +
Sbjct: 214 IFSYGPCQFPTLGLIVQRQWEIQAHVAEPFWYI 246
>gi|163855342|ref|YP_001629640.1| DNA topoisomerase III [Bordetella petrii DSM 12804]
gi|163259070|emb|CAP41369.1| DNA topoisomerase III [Bordetella petrii]
Length = 673
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F+ PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFESVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|84489180|ref|YP_447412.1| hypothetical protein Msp_0366 [Methanosphaera stadtmanae DSM 3091]
gi|84372499|gb|ABC56769.1| TopA [Methanosphaera stadtmanae DSM 3091]
Length = 722
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+S G QTPTL ER +I+ F PEPYWL+ L
Sbjct: 197 LSAGRVQTPTLAILTEREKEIQKFIPEPYWLIKAKL 232
>gi|420139701|ref|ZP_14647522.1| DNA topoisomerase III [Pseudomonas aeruginosa CIG1]
gi|421159958|ref|ZP_15619061.1| DNA topoisomerase III [Pseudomonas aeruginosa ATCC 25324]
gi|403247549|gb|EJY61184.1| DNA topoisomerase III [Pseudomonas aeruginosa CIG1]
gi|404545691|gb|EKA54762.1| DNA topoisomerase III [Pseudomonas aeruginosa ATCC 25324]
Length = 670
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F+ PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFESVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|399030439|ref|ZP_10730909.1| DNA topoisomerase III [Flavobacterium sp. CF136]
gi|398071576|gb|EJL62828.1| DNA topoisomerase III [Flavobacterium sp. CF136]
Length = 763
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V+R +I FKP+PYW L
Sbjct: 176 YTVKHGGYK-QVLSIGRVQTPTLAMVVDRFKEIENFKPQPYWEL 218
>gi|343420183|emb|CCD19182.1| DNA topoisomerase, putative [Trypanosoma vivax Y486]
Length = 803
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++++GPCQ PTLGF V R R F PE Y+ L L
Sbjct: 153 VLNFGPCQIPTLGFVVRRSWDQRGFVPEEYFTLAL 187
>gi|126178720|ref|YP_001046685.1| DNA topoisomerase [Methanoculleus marisnigri JR1]
gi|125861514|gb|ABN56703.1| DNA topoisomerase I [Methanoculleus marisnigri JR1]
Length = 931
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
+++S G Q+PTL VER +I +F P+ YW+L L +G
Sbjct: 189 NILSVGRVQSPTLAMIVEREREIESFVPQTYWMLSLATEKDG 230
>gi|146300044|ref|YP_001194635.1| DNA topoisomerase III [Flavobacterium johnsoniae UW101]
gi|146154462|gb|ABQ05316.1| DNA topoisomerase III [Flavobacterium johnsoniae UW101]
Length = 768
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V+R +I FKP+PYW L
Sbjct: 176 YTVKHGGYK-QVLSIGRVQTPTLAMVVDRFKEIENFKPQPYWEL 218
>gi|332158871|ref|YP_004424150.1| DNA topoisomerase I [Pyrococcus sp. NA2]
gi|331034334|gb|AEC52146.1| DNA topoisomerase I [Pyrococcus sp. NA2]
Length = 1051
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G Q PTL F V+R +I++F P+PYW++ + + G+
Sbjct: 194 ILSTGRVQGPTLKFLVDREREIQSFVPKPYWVIKMVIEKGGK 235
>gi|423345843|ref|ZP_17323532.1| DNA topoisomerase III [Parabacteroides merdae CL03T12C32]
gi|409221578|gb|EKN14527.1| DNA topoisomerase III [Parabacteroides merdae CL03T12C32]
Length = 692
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + ++S G QTPTL V R +I FKPEP+W L
Sbjct: 176 YTLRYGQ-NRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPFWEL 218
>gi|406896416|gb|EKD40701.1| hypothetical protein ACD_74C00239G0001 [uncultured bacterium]
Length = 787
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN-LNGEWVS 69
+++S G QTPTL V R +I F P+PYW+L T++ + G++V+
Sbjct: 186 TVLSAGRVQTPTLALVVGRDREIEQFTPKPYWVLRATVDHVAGQFVA 232
>gi|402495207|ref|ZP_10841939.1| DNA topoisomerase III [Aquimarina agarilytica ZC1]
Length = 751
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V+R+ +I FKP PYW L
Sbjct: 186 VLSVGRVQTPTLAMLVQRYKEIENFKPTPYWEL 218
>gi|429966189|gb|ELA48186.1| hypothetical protein VCUG_00424 [Vavraia culicis 'floridensis']
Length = 849
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
D ++ISYG CQ PTLGF VER + + F E ++ L +++
Sbjct: 185 DKNVISYGSCQIPTLGFVVERALERKDFVAEKFFTLKISI 224
>gi|346226277|ref|ZP_08847419.1| DNA topoisomerase III [Anaerophaga thermohalophila DSM 12881]
Length = 795
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Y KYG ++S G QTPTL VER +I F P+P+W L T
Sbjct: 176 YTLKYGQ-HGQVLSIGRVQTPTLALIVERQKEIDHFVPQPFWELKTT 221
>gi|403213445|emb|CCK67947.1| hypothetical protein KNAG_0A02580 [Kazachstania naganishii CBS
8797]
Length = 650
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGF-CVERHDKIRTFKPEPYWLLDLTL 61
+Q + D +ISYGPCQ P G R ++IR F PE +W + L L
Sbjct: 214 HQSQNRKKDKVVISYGPCQFPHFGVRGGRRFERIRNFIPEEFWYIQLQL 262
>gi|389603297|ref|XP_001568961.2| putative DNA topoisomerase III [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505799|emb|CAM44094.2| putative DNA topoisomerase III [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 951
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R+ K + F PE ++ L +
Sbjct: 200 VLSFGPCQFPTLGFVVRRYWKQQGFVPEDFFTLQV 234
>gi|163939745|ref|YP_001644629.1| DNA topoisomerase III [Bacillus weihenstephanensis KBAB4]
gi|163861942|gb|ABY43001.1| DNA topoisomerase III [Bacillus weihenstephanensis KBAB4]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|48477819|ref|YP_023525.1| DNA topoisomerase I [Picrophilus torridus DSM 9790]
gi|48430467|gb|AAT43332.1| DNA topoisomerase I [Picrophilus torridus DSM 9790]
Length = 753
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEW 67
IS G QTPTLG +R +IR+F PE Y+ + +T N N ++
Sbjct: 188 FISVGRVQTPTLGLIYKREMEIRSFVPEKYYKIKITFNKNRDF 230
>gi|427818587|ref|ZP_18985650.1| dna topoisomerase ec=5.99.1.2 [Bordetella bronchiseptica D445]
gi|410569587|emb|CCN17695.1| dna topoisomerase ec=5.99.1.2 [Bordetella bronchiseptica D445]
Length = 670
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++A Y G ++S G QTPTL V+R +I FK P+W +D++L+ G+ S
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFS 230
>gi|423617890|ref|ZP_17593724.1| DNA topoisomerase III [Bacillus cereus VD115]
gi|401254655|gb|EJR60882.1| DNA topoisomerase III [Bacillus cereus VD115]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423481806|ref|ZP_17458496.1| DNA topoisomerase III [Bacillus cereus BAG6X1-2]
gi|401145014|gb|EJQ52541.1| DNA topoisomerase III [Bacillus cereus BAG6X1-2]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423460161|ref|ZP_17436958.1| DNA topoisomerase III [Bacillus cereus BAG5X2-1]
gi|401140214|gb|EJQ47770.1| DNA topoisomerase III [Bacillus cereus BAG5X2-1]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423391779|ref|ZP_17369005.1| DNA topoisomerase III [Bacillus cereus BAG1X1-3]
gi|423420099|ref|ZP_17397188.1| DNA topoisomerase III [Bacillus cereus BAG3X2-1]
gi|401102008|gb|EJQ09995.1| DNA topoisomerase III [Bacillus cereus BAG3X2-1]
gi|401637612|gb|EJS55365.1| DNA topoisomerase III [Bacillus cereus BAG1X1-3]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423366314|ref|ZP_17343747.1| DNA topoisomerase III [Bacillus cereus VD142]
gi|401088227|gb|EJP96419.1| DNA topoisomerase III [Bacillus cereus VD142]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229059600|ref|ZP_04196979.1| DNA topoisomerase III [Bacillus cereus AH603]
gi|229132767|ref|ZP_04261612.1| DNA topoisomerase III [Bacillus cereus BDRD-ST196]
gi|229166806|ref|ZP_04294555.1| DNA topoisomerase III [Bacillus cereus AH621]
gi|423487056|ref|ZP_17463738.1| DNA topoisomerase III [Bacillus cereus BtB2-4]
gi|423492780|ref|ZP_17469424.1| DNA topoisomerase III [Bacillus cereus CER057]
gi|423500428|ref|ZP_17477045.1| DNA topoisomerase III [Bacillus cereus CER074]
gi|423516611|ref|ZP_17493092.1| DNA topoisomerase III [Bacillus cereus HuA2-4]
gi|423594116|ref|ZP_17570147.1| DNA topoisomerase III [Bacillus cereus VD048]
gi|423600719|ref|ZP_17576719.1| DNA topoisomerase III [Bacillus cereus VD078]
gi|423663213|ref|ZP_17638382.1| DNA topoisomerase III [Bacillus cereus VDM022]
gi|423667596|ref|ZP_17642625.1| DNA topoisomerase III [Bacillus cereus VDM034]
gi|423676338|ref|ZP_17651277.1| DNA topoisomerase III [Bacillus cereus VDM062]
gi|228616664|gb|EEK73740.1| DNA topoisomerase III [Bacillus cereus AH621]
gi|228650594|gb|EEL06584.1| DNA topoisomerase III [Bacillus cereus BDRD-ST196]
gi|228719734|gb|EEL71331.1| DNA topoisomerase III [Bacillus cereus AH603]
gi|401154714|gb|EJQ62128.1| DNA topoisomerase III [Bacillus cereus CER074]
gi|401156264|gb|EJQ63671.1| DNA topoisomerase III [Bacillus cereus CER057]
gi|401165517|gb|EJQ72836.1| DNA topoisomerase III [Bacillus cereus HuA2-4]
gi|401224917|gb|EJR31469.1| DNA topoisomerase III [Bacillus cereus VD048]
gi|401231265|gb|EJR37768.1| DNA topoisomerase III [Bacillus cereus VD078]
gi|401296412|gb|EJS02031.1| DNA topoisomerase III [Bacillus cereus VDM022]
gi|401303261|gb|EJS08823.1| DNA topoisomerase III [Bacillus cereus VDM034]
gi|401307459|gb|EJS12884.1| DNA topoisomerase III [Bacillus cereus VDM062]
gi|402438933|gb|EJV70942.1| DNA topoisomerase III [Bacillus cereus BtB2-4]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229190033|ref|ZP_04317041.1| DNA topoisomerase III [Bacillus cereus ATCC 10876]
gi|228593525|gb|EEK51336.1| DNA topoisomerase III [Bacillus cereus ATCC 10876]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|134299706|ref|YP_001113202.1| DNA topoisomerase III [Desulfotomaculum reducens MI-1]
gi|134052406|gb|ABO50377.1| DNA topoisomerase III [Desulfotomaculum reducens MI-1]
Length = 695
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
L+ +N A + K+GDL S G QTPTLG V R +I+TF P YW L
Sbjct: 168 LIGINATRA-FTKKHGDL----FSIGRVQTPTLGLIVAREKEIKTFIPAHYWEL 216
>gi|423555329|ref|ZP_17531632.1| DNA topoisomerase III [Bacillus cereus MC67]
gi|401196733|gb|EJR03671.1| DNA topoisomerase III [Bacillus cereus MC67]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228990943|ref|ZP_04150906.1| DNA topoisomerase III [Bacillus pseudomycoides DSM 12442]
gi|228768723|gb|EEM17323.1| DNA topoisomerase III [Bacillus pseudomycoides DSM 12442]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229011236|ref|ZP_04168429.1| DNA topoisomerase III [Bacillus mycoides DSM 2048]
gi|228750119|gb|EEL99951.1| DNA topoisomerase III [Bacillus mycoides DSM 2048]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229017236|ref|ZP_04174143.1| DNA topoisomerase III [Bacillus cereus AH1273]
gi|229023410|ref|ZP_04179912.1| DNA topoisomerase III [Bacillus cereus AH1272]
gi|228737884|gb|EEL88378.1| DNA topoisomerase III [Bacillus cereus AH1272]
gi|228744064|gb|EEL94159.1| DNA topoisomerase III [Bacillus cereus AH1273]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229029631|ref|ZP_04185708.1| DNA topoisomerase III [Bacillus cereus AH1271]
gi|228731691|gb|EEL82596.1| DNA topoisomerase III [Bacillus cereus AH1271]
Length = 714
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|30019974|ref|NP_831605.1| DNA topoisomerase III [Bacillus cereus ATCC 14579]
gi|29895519|gb|AAP08806.1| DNA topoisomerase I [Bacillus cereus ATCC 14579]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|427825570|ref|ZP_18992632.1| dna topoisomerase ec=5.99.1.2 [Bordetella bronchiseptica Bbr77]
gi|410590835|emb|CCN05928.1| dna topoisomerase ec=5.99.1.2 [Bordetella bronchiseptica Bbr77]
Length = 674
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++A Y G ++S G QTPTL V+R +I FK P+W +D++L+ G+ S
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFS 230
>gi|423475851|ref|ZP_17452566.1| DNA topoisomerase III [Bacillus cereus BAG6X1-1]
gi|402434683|gb|EJV66720.1| DNA topoisomerase III [Bacillus cereus BAG6X1-1]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423403502|ref|ZP_17380675.1| DNA topoisomerase III [Bacillus cereus BAG2X1-2]
gi|401648599|gb|EJS66194.1| DNA topoisomerase III [Bacillus cereus BAG2X1-2]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423383336|ref|ZP_17360592.1| DNA topoisomerase III [Bacillus cereus BAG1X1-2]
gi|401644196|gb|EJS61890.1| DNA topoisomerase III [Bacillus cereus BAG1X1-2]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423454595|ref|ZP_17431448.1| DNA topoisomerase III [Bacillus cereus BAG5X1-1]
gi|401135564|gb|EJQ43161.1| DNA topoisomerase III [Bacillus cereus BAG5X1-1]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|395800464|ref|ZP_10479739.1| DNA topoisomerase III [Flavobacterium sp. F52]
gi|395437395|gb|EJG03314.1| DNA topoisomerase III [Flavobacterium sp. F52]
Length = 769
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V+R +I FKP+PYW L
Sbjct: 176 YTVKHGGYK-QVLSIGRVQTPTLAMVVDRFREIENFKPQPYWEL 218
>gi|340619183|ref|YP_004737636.1| DNA topoisomerase III [Zobellia galactanivorans]
gi|339733980|emb|CAZ97357.1| DNA topoisomerase III [Zobellia galactanivorans]
Length = 766
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V+R +I FKP+PYW L
Sbjct: 186 VLSVGRVQTPTLAMLVDRFKEIENFKPQPYWEL 218
>gi|229172609|ref|ZP_04300168.1| DNA topoisomerase III [Bacillus cereus MM3]
gi|228611080|gb|EEK68343.1| DNA topoisomerase III [Bacillus cereus MM3]
Length = 714
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|398024578|ref|XP_003865450.1| DNA topoisomerase III, putative [Leishmania donovani]
gi|322503687|emb|CBZ38773.1| DNA topoisomerase III, putative [Leishmania donovani]
Length = 947
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R+ + + F PE ++ L L
Sbjct: 200 VLSFGPCQFPTLGFVVRRYWQQQGFVPEDFFTLQL 234
>gi|401420366|ref|XP_003874672.1| putative DNA topoisomerase III [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490908|emb|CBZ26172.1| putative DNA topoisomerase III [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 948
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R+ + + F PE ++ L L
Sbjct: 200 VLSFGPCQFPTLGFVVRRYWQQQGFVPEDFFTLQL 234
>gi|146104103|ref|XP_001469727.1| putative DNA topoisomerase III [Leishmania infantum JPCM5]
gi|134074097|emb|CAM72839.1| putative DNA topoisomerase III [Leishmania infantum JPCM5]
Length = 947
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R+ + + F PE ++ L L
Sbjct: 200 VLSFGPCQFPTLGFVVRRYWQQQGFVPEDFFTLQL 234
>gi|157877136|ref|XP_001686899.1| putative DNA topoisomerase III [Leishmania major strain Friedlin]
gi|68129974|emb|CAJ09282.1| putative DNA topoisomerase III [Leishmania major strain Friedlin]
Length = 947
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDL 59
++S+GPCQ PTLGF V R+ + + F PE ++ L L
Sbjct: 200 VLSFGPCQFPTLGFVVRRYWQQQGFVPEDFFTLQL 234
>gi|217968561|ref|YP_002353795.1| DNA topoisomerase III [Thauera sp. MZ1T]
gi|217505888|gb|ACK52899.1| DNA topoisomerase III [Thauera sp. MZ1T]
Length = 854
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
L + G QTPTL VER D+IR FK YW L+
Sbjct: 190 LTTVGRVQTPTLAMVVEREDRIRKFKSRDYWELE 223
>gi|229196148|ref|ZP_04322898.1| DNA topoisomerase III [Bacillus cereus m1293]
gi|423576334|ref|ZP_17552453.1| DNA topoisomerase III [Bacillus cereus MSX-D12]
gi|228587306|gb|EEK45374.1| DNA topoisomerase III [Bacillus cereus m1293]
gi|401207330|gb|EJR14109.1| DNA topoisomerase III [Bacillus cereus MSX-D12]
Length = 714
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423524220|ref|ZP_17500693.1| DNA topoisomerase III [Bacillus cereus HuA4-10]
gi|401170063|gb|EJQ77304.1| DNA topoisomerase III [Bacillus cereus HuA4-10]
Length = 714
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228958218|ref|ZP_04119948.1| DNA topoisomerase III [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423629205|ref|ZP_17604953.1| DNA topoisomerase III [Bacillus cereus VD154]
gi|228801489|gb|EEM48376.1| DNA topoisomerase III [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401267960|gb|EJR74015.1| DNA topoisomerase III [Bacillus cereus VD154]
Length = 714
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|206970776|ref|ZP_03231728.1| DNA topoisomerase III [Bacillus cereus AH1134]
gi|206734412|gb|EDZ51582.1| DNA topoisomerase III [Bacillus cereus AH1134]
Length = 714
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|218903057|ref|YP_002450891.1| DNA topoisomerase III [Bacillus cereus AH820]
gi|218539730|gb|ACK92128.1| DNA topoisomerase III [Bacillus cereus AH820]
Length = 714
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|402557824|ref|YP_006599095.1| DNA topoisomerase III [Bacillus cereus FRI-35]
gi|401799034|gb|AFQ12893.1| DNA topoisomerase III [Bacillus cereus FRI-35]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423408244|ref|ZP_17385393.1| DNA topoisomerase III [Bacillus cereus BAG2X1-3]
gi|401657923|gb|EJS75427.1| DNA topoisomerase III [Bacillus cereus BAG2X1-3]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423397387|ref|ZP_17374588.1| DNA topoisomerase III [Bacillus cereus BAG2X1-1]
gi|401649433|gb|EJS67011.1| DNA topoisomerase III [Bacillus cereus BAG2X1-1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423647856|ref|ZP_17623426.1| DNA topoisomerase III [Bacillus cereus VD169]
gi|401285810|gb|EJR91649.1| DNA topoisomerase III [Bacillus cereus VD169]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423637351|ref|ZP_17613004.1| DNA topoisomerase III [Bacillus cereus VD156]
gi|401273294|gb|EJR79279.1| DNA topoisomerase III [Bacillus cereus VD156]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423606305|ref|ZP_17582198.1| DNA topoisomerase III [Bacillus cereus VD102]
gi|401241861|gb|EJR48239.1| DNA topoisomerase III [Bacillus cereus VD102]
Length = 715
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 195 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 236
>gi|423587630|ref|ZP_17563717.1| DNA topoisomerase III [Bacillus cereus VD045]
gi|401227367|gb|EJR33896.1| DNA topoisomerase III [Bacillus cereus VD045]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423580126|ref|ZP_17556237.1| DNA topoisomerase III [Bacillus cereus VD014]
gi|401217581|gb|EJR24275.1| DNA topoisomerase III [Bacillus cereus VD014]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423563747|ref|ZP_17540023.1| DNA topoisomerase III [Bacillus cereus MSX-A1]
gi|401198241|gb|EJR05161.1| DNA topoisomerase III [Bacillus cereus MSX-A1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423435407|ref|ZP_17412388.1| DNA topoisomerase III [Bacillus cereus BAG4X12-1]
gi|401125645|gb|EJQ33405.1| DNA topoisomerase III [Bacillus cereus BAG4X12-1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423361946|ref|ZP_17339448.1| DNA topoisomerase III [Bacillus cereus VD022]
gi|401078837|gb|EJP87142.1| DNA topoisomerase III [Bacillus cereus VD022]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|384179882|ref|YP_005565644.1| DNA topoisomerase III [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325966|gb|ADY21226.1| DNA topoisomerase III [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228914526|ref|ZP_04078135.1| DNA topoisomerase III [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228844845|gb|EEM89887.1| DNA topoisomerase III [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228985033|ref|ZP_04145201.1| DNA topoisomerase III [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774721|gb|EEM23119.1| DNA topoisomerase III [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229079113|ref|ZP_04211663.1| DNA topoisomerase III [Bacillus cereus Rock4-2]
gi|423414385|ref|ZP_17391505.1| DNA topoisomerase III [Bacillus cereus BAG3O-2]
gi|423429831|ref|ZP_17406835.1| DNA topoisomerase III [Bacillus cereus BAG4O-1]
gi|228704203|gb|EEL56639.1| DNA topoisomerase III [Bacillus cereus Rock4-2]
gi|401097978|gb|EJQ05997.1| DNA topoisomerase III [Bacillus cereus BAG3O-2]
gi|401122137|gb|EJQ29926.1| DNA topoisomerase III [Bacillus cereus BAG4O-1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229109396|ref|ZP_04238992.1| DNA topoisomerase III [Bacillus cereus Rock1-15]
gi|228674086|gb|EEL29334.1| DNA topoisomerase III [Bacillus cereus Rock1-15]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229127261|ref|ZP_04256257.1| DNA topoisomerase III [Bacillus cereus BDRD-Cer4]
gi|228656094|gb|EEL11936.1| DNA topoisomerase III [Bacillus cereus BDRD-Cer4]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229150148|ref|ZP_04278370.1| DNA topoisomerase III [Bacillus cereus m1550]
gi|228633267|gb|EEK89874.1| DNA topoisomerase III [Bacillus cereus m1550]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229155518|ref|ZP_04283626.1| DNA topoisomerase III [Bacillus cereus ATCC 4342]
gi|228627836|gb|EEK84555.1| DNA topoisomerase III [Bacillus cereus ATCC 4342]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229160906|ref|ZP_04288895.1| DNA topoisomerase III [Bacillus cereus R309803]
gi|228622474|gb|EEK79311.1| DNA topoisomerase III [Bacillus cereus R309803]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228907633|ref|ZP_04071490.1| DNA topoisomerase III [Bacillus thuringiensis IBL 200]
gi|229178338|ref|ZP_04305708.1| DNA topoisomerase III [Bacillus cereus 172560W]
gi|228605217|gb|EEK62668.1| DNA topoisomerase III [Bacillus cereus 172560W]
gi|228852125|gb|EEM96922.1| DNA topoisomerase III [Bacillus thuringiensis IBL 200]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|225863868|ref|YP_002749246.1| DNA topoisomerase III [Bacillus cereus 03BB102]
gi|229184145|ref|ZP_04311354.1| DNA topoisomerase III [Bacillus cereus BGSC 6E1]
gi|376265800|ref|YP_005118512.1| DNA topoisomerase III [Bacillus cereus F837/76]
gi|225786890|gb|ACO27107.1| DNA topoisomerase III [Bacillus cereus 03BB102]
gi|228599260|gb|EEK56871.1| DNA topoisomerase III [Bacillus cereus BGSC 6E1]
gi|364511600|gb|AEW54999.1| DNA topoisomerase III [Bacillus cereus F837/76]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|196041899|ref|ZP_03109187.1| DNA topoisomerase III [Bacillus cereus NVH0597-99]
gi|196027271|gb|EDX65890.1| DNA topoisomerase III [Bacillus cereus NVH0597-99]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|218896877|ref|YP_002445288.1| DNA topoisomerase III [Bacillus cereus G9842]
gi|228939060|ref|ZP_04101658.1| DNA topoisomerase III [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228952311|ref|ZP_04114400.1| DNA topoisomerase III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228971940|ref|ZP_04132561.1| DNA topoisomerase III [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228978547|ref|ZP_04138923.1| DNA topoisomerase III [Bacillus thuringiensis Bt407]
gi|229043696|ref|ZP_04191401.1| DNA topoisomerase III [Bacillus cereus AH676]
gi|229144550|ref|ZP_04272953.1| DNA topoisomerase III [Bacillus cereus BDRD-ST24]
gi|296502531|ref|YP_003664231.1| DNA topoisomerase III [Bacillus thuringiensis BMB171]
gi|365160271|ref|ZP_09356440.1| DNA topoisomerase III [Bacillus sp. 7_6_55CFAA_CT2]
gi|384185850|ref|YP_005571746.1| DNA topoisomerase III [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410674144|ref|YP_006926515.1| DNA topoisomerase 1 [Bacillus thuringiensis Bt407]
gi|423423992|ref|ZP_17401023.1| DNA topoisomerase III [Bacillus cereus BAG3X2-2]
gi|423504478|ref|ZP_17481069.1| DNA topoisomerase III [Bacillus cereus HD73]
gi|423530212|ref|ZP_17506657.1| DNA topoisomerase III [Bacillus cereus HuB1-1]
gi|423643029|ref|ZP_17618647.1| DNA topoisomerase III [Bacillus cereus VD166]
gi|423654724|ref|ZP_17630023.1| DNA topoisomerase III [Bacillus cereus VD200]
gi|449088730|ref|YP_007421171.1| DNA topoisomerase III [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452198178|ref|YP_007478259.1| DNA topoisomerase III [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|218544343|gb|ACK96737.1| DNA topoisomerase III [Bacillus cereus G9842]
gi|228638963|gb|EEK95390.1| DNA topoisomerase III [Bacillus cereus BDRD-ST24]
gi|228725646|gb|EEL76898.1| DNA topoisomerase III [Bacillus cereus AH676]
gi|228781201|gb|EEM29403.1| DNA topoisomerase III [Bacillus thuringiensis Bt407]
gi|228788030|gb|EEM35988.1| DNA topoisomerase III [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228807439|gb|EEM53969.1| DNA topoisomerase III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228820635|gb|EEM66662.1| DNA topoisomerase III [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|296323583|gb|ADH06511.1| DNA topoisomerase III [Bacillus thuringiensis BMB171]
gi|326939559|gb|AEA15455.1| DNA topoisomerase III [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363623750|gb|EHL74855.1| DNA topoisomerase III [Bacillus sp. 7_6_55CFAA_CT2]
gi|401114820|gb|EJQ22678.1| DNA topoisomerase III [Bacillus cereus BAG3X2-2]
gi|401275033|gb|EJR81000.1| DNA topoisomerase III [Bacillus cereus VD166]
gi|401294861|gb|EJS00487.1| DNA topoisomerase III [Bacillus cereus VD200]
gi|402446727|gb|EJV78585.1| DNA topoisomerase III [Bacillus cereus HuB1-1]
gi|402456347|gb|EJV88121.1| DNA topoisomerase III [Bacillus cereus HD73]
gi|409173273|gb|AFV17578.1| DNA topoisomerase 1 [Bacillus thuringiensis Bt407]
gi|449022487|gb|AGE77650.1| DNA topoisomerase III [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452103571|gb|AGG00511.1| DNA topoisomerase III [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|196036741|ref|ZP_03104132.1| DNA topoisomerase III [Bacillus cereus W]
gi|228927001|ref|ZP_04090067.1| DNA topoisomerase III [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229121487|ref|ZP_04250714.1| DNA topoisomerase III [Bacillus cereus 95/8201]
gi|301053471|ref|YP_003791682.1| DNA topoisomerase III [Bacillus cereus biovar anthracis str. CI]
gi|423552332|ref|ZP_17528659.1| DNA topoisomerase III [Bacillus cereus ISP3191]
gi|195990624|gb|EDX54601.1| DNA topoisomerase III [Bacillus cereus W]
gi|228661951|gb|EEL17564.1| DNA topoisomerase III [Bacillus cereus 95/8201]
gi|228832736|gb|EEM78307.1| DNA topoisomerase III [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|300375640|gb|ADK04544.1| DNA topoisomerase III [Bacillus cereus biovar anthracis str. CI]
gi|401186274|gb|EJQ93362.1| DNA topoisomerase III [Bacillus cereus ISP3191]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|217959416|ref|YP_002337964.1| DNA topoisomerase III [Bacillus cereus AH187]
gi|222095556|ref|YP_002529616.1| DNA topoisomerase iii [Bacillus cereus Q1]
gi|229138637|ref|ZP_04267220.1| DNA topoisomerase III [Bacillus cereus BDRD-ST26]
gi|375283918|ref|YP_005104356.1| DNA topoisomerase III [Bacillus cereus NC7401]
gi|423356191|ref|ZP_17333814.1| DNA topoisomerase III [Bacillus cereus IS075]
gi|423371914|ref|ZP_17349254.1| DNA topoisomerase III [Bacillus cereus AND1407]
gi|423569150|ref|ZP_17545396.1| DNA topoisomerase III [Bacillus cereus MSX-A12]
gi|217064217|gb|ACJ78467.1| DNA topoisomerase III [Bacillus cereus AH187]
gi|221239614|gb|ACM12324.1| dna topoisomerase iii [Bacillus cereus Q1]
gi|228644837|gb|EEL01086.1| DNA topoisomerase III [Bacillus cereus BDRD-ST26]
gi|358352444|dbj|BAL17616.1| DNA topoisomerase III [Bacillus cereus NC7401]
gi|401079899|gb|EJP88192.1| DNA topoisomerase III [Bacillus cereus IS075]
gi|401100998|gb|EJQ08991.1| DNA topoisomerase III [Bacillus cereus AND1407]
gi|401207934|gb|EJR14712.1| DNA topoisomerase III [Bacillus cereus MSX-A12]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|118477367|ref|YP_894518.1| DNA topoisomerase III [Bacillus thuringiensis str. Al Hakam]
gi|196047022|ref|ZP_03114241.1| DNA topoisomerase III [Bacillus cereus 03BB108]
gi|118416592|gb|ABK85011.1| DNA topoisomerase III [Bacillus thuringiensis str. Al Hakam]
gi|196022126|gb|EDX60814.1| DNA topoisomerase III [Bacillus cereus 03BB108]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|30261939|ref|NP_844316.1| DNA topoisomerase III [Bacillus anthracis str. Ames]
gi|47527199|ref|YP_018548.1| DNA topoisomerase III [Bacillus anthracis str. 'Ames Ancestor']
gi|49184779|ref|YP_028031.1| DNA topoisomerase III [Bacillus anthracis str. Sterne]
gi|65319222|ref|ZP_00392181.1| COG0550: Topoisomerase IA [Bacillus anthracis str. A2012]
gi|165873295|ref|ZP_02217902.1| DNA topoisomerase III [Bacillus anthracis str. A0488]
gi|167636673|ref|ZP_02394962.1| DNA topoisomerase III [Bacillus anthracis str. A0442]
gi|167642006|ref|ZP_02400238.1| DNA topoisomerase III [Bacillus anthracis str. A0193]
gi|170686444|ref|ZP_02877665.1| DNA topoisomerase III [Bacillus anthracis str. A0465]
gi|170705978|ref|ZP_02896440.1| DNA topoisomerase III [Bacillus anthracis str. A0389]
gi|177655931|ref|ZP_02937105.1| DNA topoisomerase III [Bacillus anthracis str. A0174]
gi|190566487|ref|ZP_03019405.1| DNA topoisomerase III [Bacillus anthracis str. Tsiankovskii-I]
gi|227815275|ref|YP_002815284.1| DNA topoisomerase III [Bacillus anthracis str. CDC 684]
gi|228933242|ref|ZP_04096098.1| DNA topoisomerase III [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229090919|ref|ZP_04222144.1| DNA topoisomerase III [Bacillus cereus Rock3-42]
gi|229600581|ref|YP_002866311.1| DNA topoisomerase III [Bacillus anthracis str. A0248]
gi|254684501|ref|ZP_05148361.1| DNA topoisomerase III [Bacillus anthracis str. CNEVA-9066]
gi|254721205|ref|ZP_05182995.1| DNA topoisomerase III [Bacillus anthracis str. A1055]
gi|254734804|ref|ZP_05192516.1| DNA topoisomerase III [Bacillus anthracis str. Western North
America USA6153]
gi|254741206|ref|ZP_05198894.1| DNA topoisomerase III [Bacillus anthracis str. Kruger B]
gi|254755459|ref|ZP_05207493.1| DNA topoisomerase III [Bacillus anthracis str. Vollum]
gi|254759995|ref|ZP_05212019.1| DNA topoisomerase III [Bacillus anthracis str. Australia 94]
gi|386735675|ref|YP_006208856.1| DNA topoisomerase III [Bacillus anthracis str. H9401]
gi|421508830|ref|ZP_15955741.1| DNA topoisomerase III [Bacillus anthracis str. UR-1]
gi|421635731|ref|ZP_16076330.1| DNA topoisomerase III [Bacillus anthracis str. BF1]
gi|30256565|gb|AAP25802.1| DNA topoisomerase III [Bacillus anthracis str. Ames]
gi|47502347|gb|AAT31023.1| DNA topoisomerase III [Bacillus anthracis str. 'Ames Ancestor']
gi|49178706|gb|AAT54082.1| DNA topoisomerase III [Bacillus anthracis str. Sterne]
gi|164710960|gb|EDR16530.1| DNA topoisomerase III [Bacillus anthracis str. A0488]
gi|167510025|gb|EDR85439.1| DNA topoisomerase III [Bacillus anthracis str. A0193]
gi|167527900|gb|EDR90719.1| DNA topoisomerase III [Bacillus anthracis str. A0442]
gi|170128980|gb|EDS97845.1| DNA topoisomerase III [Bacillus anthracis str. A0389]
gi|170669520|gb|EDT20262.1| DNA topoisomerase III [Bacillus anthracis str. A0465]
gi|172079916|gb|EDT65022.1| DNA topoisomerase III [Bacillus anthracis str. A0174]
gi|190562622|gb|EDV16589.1| DNA topoisomerase III [Bacillus anthracis str. Tsiankovskii-I]
gi|227007799|gb|ACP17542.1| DNA topoisomerase III [Bacillus anthracis str. CDC 684]
gi|228692425|gb|EEL46159.1| DNA topoisomerase III [Bacillus cereus Rock3-42]
gi|228826403|gb|EEM72180.1| DNA topoisomerase III [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229264989|gb|ACQ46626.1| DNA topoisomerase III [Bacillus anthracis str. A0248]
gi|384385527|gb|AFH83188.1| DNA topoisomerase III [Bacillus anthracis str. H9401]
gi|401821226|gb|EJT20385.1| DNA topoisomerase III [Bacillus anthracis str. UR-1]
gi|403396259|gb|EJY93496.1| DNA topoisomerase III [Bacillus anthracis str. BF1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|433676136|ref|ZP_20508286.1| DNA topoisomerase III [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818733|emb|CCP38554.1| DNA topoisomerase III [Xanthomonas translucens pv. translucens DSM
18974]
Length = 670
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D+ L+ +G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVALSTSGHPFT 230
Query: 66 -EWVS 69
+WVS
Sbjct: 231 AQWVS 235
>gi|52143516|ref|YP_083320.1| DNA topoisomerase III [Bacillus cereus E33L]
gi|51976985|gb|AAU18535.1| DNA topoisomerase I [Bacillus cereus E33L]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|42781053|ref|NP_978300.1| DNA topoisomerase III [Bacillus cereus ATCC 10987]
gi|42736974|gb|AAS40908.1| DNA topoisomerase III [Bacillus cereus ATCC 10987]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423472184|ref|ZP_17448927.1| DNA topoisomerase III [Bacillus cereus BAG6O-2]
gi|402429039|gb|EJV61129.1| DNA topoisomerase III [Bacillus cereus BAG6O-2]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|325983537|ref|YP_004295939.1| DNA topoisomerase III [Nitrosomonas sp. AL212]
gi|325533056|gb|ADZ27777.1| DNA topoisomerase III [Nitrosomonas sp. AL212]
Length = 838
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL-NGEW 67
+ G QTPTL VER +KI+ F+P+ YW + T NG++
Sbjct: 192 TVGRVQTPTLAILVEREEKIKKFRPQDYWEIHATFTTSNGDY 233
>gi|228900526|ref|ZP_04064750.1| DNA topoisomerase III [Bacillus thuringiensis IBL 4222]
gi|434374875|ref|YP_006609519.1| DNA topoisomerase III [Bacillus thuringiensis HD-789]
gi|228859131|gb|EEN03567.1| DNA topoisomerase III [Bacillus thuringiensis IBL 4222]
gi|401873432|gb|AFQ25599.1| DNA topoisomerase III [Bacillus thuringiensis HD-789]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228945551|ref|ZP_04107901.1| DNA topoisomerase III [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228814069|gb|EEM60340.1| DNA topoisomerase III [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229004681|ref|ZP_04162418.1| DNA topoisomerase III [Bacillus mycoides Rock1-4]
gi|228756569|gb|EEM05877.1| DNA topoisomerase III [Bacillus mycoides Rock1-4]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|218230874|ref|YP_002366628.1| DNA topoisomerase III [Bacillus cereus B4264]
gi|218158831|gb|ACK58823.1| DNA topoisomerase III [Bacillus cereus B4264]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423509791|ref|ZP_17486322.1| DNA topoisomerase III [Bacillus cereus HuA2-1]
gi|402456023|gb|EJV87801.1| DNA topoisomerase III [Bacillus cereus HuA2-1]
Length = 525
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|423610290|ref|ZP_17586151.1| DNA topoisomerase III [Bacillus cereus VD107]
gi|401249607|gb|EJR55913.1| DNA topoisomerase III [Bacillus cereus VD107]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228920641|ref|ZP_04083985.1| DNA topoisomerase III [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839006|gb|EEM84303.1| DNA topoisomerase III [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 716
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 196 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 237
>gi|229069482|ref|ZP_04202771.1| DNA topoisomerase III [Bacillus cereus F65185]
gi|228713621|gb|EEL65507.1| DNA topoisomerase III [Bacillus cereus F65185]
Length = 714
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|49481155|ref|YP_036076.1| DNA topoisomerase III [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49332711|gb|AAT63357.1| DNA topoisomerase I [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 714
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|241763152|ref|ZP_04761212.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
gi|241367777|gb|EER62031.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
Length = 670
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++A Y G ++S G QTPTL V+R +I FK P+W +D+TL G+ S
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVTLFAGGQAFS 230
>gi|189218917|ref|YP_001939558.1| Topoisomerase IA [Methylacidiphilum infernorum V4]
gi|189185775|gb|ACD82960.1| Topoisomerase IA [Methylacidiphilum infernorum V4]
Length = 855
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L S G QTPTL VER +I +F+P+PYW
Sbjct: 191 LTSVGRVQTPTLALVVERDKEILSFQPKPYW 221
>gi|228964932|ref|ZP_04126036.1| DNA topoisomerase III [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402561025|ref|YP_006603749.1| DNA topoisomerase III [Bacillus thuringiensis HD-771]
gi|228794773|gb|EEM42275.1| DNA topoisomerase III [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401789677|gb|AFQ15716.1| DNA topoisomerase III [Bacillus thuringiensis HD-771]
Length = 525
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|228997017|ref|ZP_04156649.1| DNA topoisomerase III [Bacillus mycoides Rock3-17]
gi|228762758|gb|EEM11673.1| DNA topoisomerase III [Bacillus mycoides Rock3-17]
Length = 525
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|78047962|ref|YP_364137.1| DNA topoisomerase III [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036392|emb|CAJ24083.1| DNA topoisomerase III [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 670
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++A Y G ++S G QTPTL V+R +I FK P+W +D++L+ G+ S
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFS 230
>gi|152975267|ref|YP_001374784.1| DNA topoisomerase III [Bacillus cytotoxicus NVH 391-98]
gi|152024019|gb|ABS21789.1| DNA topoisomerase III [Bacillus cytotoxicus NVH 391-98]
Length = 714
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|363581226|ref|ZP_09314036.1| DNA topoisomerase III [Flavobacteriaceae bacterium HQM9]
Length = 746
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++S G QTPTL V R +I+ FKP PYW L T
Sbjct: 186 VLSVGRVQTPTLAMLVHRFKEIKHFKPTPYWELQTT 221
>gi|398950018|ref|ZP_10673562.1| DNA topoisomerase III [Pseudomonas sp. GM33]
gi|398158565|gb|EJM46907.1| DNA topoisomerase III [Pseudomonas sp. GM33]
Length = 651
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 173 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPAPYWAIDVQ 224
Query: 61 LNLNG 65
L NG
Sbjct: 225 LLHNG 229
>gi|383320621|ref|YP_005381462.1| DNA topoisomerase I [Methanocella conradii HZ254]
gi|379321991|gb|AFD00944.1| DNA topoisomerase I [Methanocella conradii HZ254]
Length = 706
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
G L S +S G QTP L V+R I++F P PYW L T + E+ +
Sbjct: 180 GRLGNSFLSVGRVQTPLLALIVDREKDIKSFVPTPYWELYATFSDGEEFTA 230
>gi|75764272|ref|ZP_00743817.1| DNA topoisomerase III [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488239|gb|EAO51910.1| DNA topoisomerase III [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 410
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|229125375|ref|ZP_04254462.1| DNA topoisomerase III [Bacillus cereus 95/8201]
gi|228658082|gb|EEL13835.1| DNA topoisomerase III [Bacillus cereus 95/8201]
Length = 756
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL + S G CQ+PTL +R +I PEP+W L T
Sbjct: 180 LRMQSEFASRNSENGDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLSGTF 239
Query: 62 NLNGE 66
++G+
Sbjct: 240 EVDGK 244
>gi|386081062|ref|YP_005994587.1| DNA topoisomerase III [Pantoea ananatis PA13]
gi|354990243|gb|AER34367.1| DNA topoisomerase III [Pantoea ananatis PA13]
Length = 672
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L EA ++G ++S G QTPTL R +I F P+PYW + TL+
Sbjct: 174 LYTLRAAEAGFEG--------VVSVGRVQTPTLALVARRDREIAAFVPKPYWQVKATLSA 225
Query: 64 NG 65
+G
Sbjct: 226 SG 227
>gi|227499982|ref|ZP_03930069.1| conserved hypothetical protein, partial [Anaerococcus tetradius
ATCC 35098]
gi|227217925|gb|EEI83208.1| conserved hypothetical protein [Anaerococcus tetradius ATCC
35098]
Length = 106
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
S G QTPTL V R D+I +FK E Y+ +++++N
Sbjct: 61 SVGRVQTPTLSMIVNRDDEINSFKKEKYYTVEISMN 96
>gi|423242328|ref|ZP_17223437.1| DNA topoisomerase III [Bacteroides dorei CL03T12C01]
gi|392639614|gb|EIY33430.1| DNA topoisomerase III [Bacteroides dorei CL03T12C01]
Length = 713
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|345513471|ref|ZP_08792992.1| DNA topoisomerase III [Bacteroides dorei 5_1_36/D4]
gi|229437378|gb|EEO47455.1| DNA topoisomerase III [Bacteroides dorei 5_1_36/D4]
Length = 713
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|212693590|ref|ZP_03301718.1| hypothetical protein BACDOR_03107 [Bacteroides dorei DSM 17855]
gi|212663843|gb|EEB24417.1| DNA topoisomerase [Bacteroides dorei DSM 17855]
Length = 713
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|15838376|ref|NP_299064.1| DNA topoisomerase I [Xylella fastidiosa 9a5c]
gi|9106851|gb|AAF84584.1|AE004000_1 DNA topoisomerase III [Xylella fastidiosa 9a5c]
Length = 619
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWVS 69
++S G QTPTL V+R +I FK P+W +D++L+ G+ S
Sbjct: 135 VLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFS 179
>gi|423228839|ref|ZP_17215245.1| DNA topoisomerase III [Bacteroides dorei CL02T00C15]
gi|423247651|ref|ZP_17228699.1| DNA topoisomerase III [Bacteroides dorei CL02T12C06]
gi|392631544|gb|EIY25515.1| DNA topoisomerase III [Bacteroides dorei CL02T12C06]
gi|392635578|gb|EIY29477.1| DNA topoisomerase III [Bacteroides dorei CL02T00C15]
Length = 713
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|237708749|ref|ZP_04539230.1| DNA topoisomerase III [Bacteroides sp. 9_1_42FAA]
gi|229457175|gb|EEO62896.1| DNA topoisomerase III [Bacteroides sp. 9_1_42FAA]
Length = 713
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|265755984|ref|ZP_06090451.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263234062|gb|EEZ19663.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 724
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 187 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 229
>gi|229051628|ref|ZP_04195098.1| DNA topoisomerase III [Bacillus cereus AH676]
gi|228721739|gb|EEL73213.1| DNA topoisomerase III [Bacillus cereus AH676]
Length = 756
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL + S G CQ+PTL +R +I PEP+W L T
Sbjct: 180 LRMQSEFASRNSENGDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLSGTF 239
Query: 62 NLNGE 66
++G+
Sbjct: 240 EVDGK 244
>gi|423608883|ref|ZP_17584774.1| DNA topoisomerase III [Bacillus cereus VD102]
gi|401236486|gb|EJR42945.1| DNA topoisomerase III [Bacillus cereus VD102]
Length = 760
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL + S G CQ+PTL +R +I PEP+W L T
Sbjct: 184 LRMQSEFASRNSENGDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLSGTF 243
Query: 62 NLNGE 66
++G+
Sbjct: 244 EVDGK 248
>gi|373857756|ref|ZP_09600496.1| DNA topoisomerase III [Bacillus sp. 1NLA3E]
gi|372452427|gb|EHP25898.1| DNA topoisomerase III [Bacillus sp. 1NLA3E]
Length = 697
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN-LNGEWVS 69
+S G QTPTL +E+ + I+ F P+PYW +D + L +W S
Sbjct: 185 LSAGRVQTPTLAMVIEQENTIQKFVPKPYWTIDSQVGPLKADWES 229
>gi|47568294|ref|ZP_00238996.1| DNA topoisomerase III [Bacillus cereus G9241]
gi|47554987|gb|EAL13336.1| DNA topoisomerase III [Bacillus cereus G9241]
Length = 375
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIENFKSEPFWEVFATFNIEGK 235
>gi|294778264|ref|ZP_06743690.1| DNA topoisomerase [Bacteroides vulgatus PC510]
gi|423312490|ref|ZP_17290427.1| DNA topoisomerase III [Bacteroides vulgatus CL09T03C04]
gi|294447892|gb|EFG16466.1| DNA topoisomerase [Bacteroides vulgatus PC510]
gi|392688178|gb|EIY81467.1| DNA topoisomerase III [Bacteroides vulgatus CL09T03C04]
Length = 713
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|150004505|ref|YP_001299249.1| DNA topoisomerase [Bacteroides vulgatus ATCC 8482]
gi|149932929|gb|ABR39627.1| putative DNA topoisomerase [Bacteroides vulgatus ATCC 8482]
Length = 713
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIENFTPQQYWVL 218
>gi|381187693|ref|ZP_09895256.1| DNA topoisomerase III [Flavobacterium frigoris PS1]
gi|379650439|gb|EIA09011.1| DNA topoisomerase III [Flavobacterium frigoris PS1]
Length = 779
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V+R I FKP+PYW L
Sbjct: 185 YTVKHGGYK-QVLSIGRVQTPTLAMVVDRFTAIENFKPQPYWEL 227
>gi|229116004|ref|ZP_04245399.1| DNA topoisomerase III [Bacillus cereus Rock1-3]
gi|228667498|gb|EEL22945.1| DNA topoisomerase III [Bacillus cereus Rock1-3]
Length = 756
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL + S G CQ+PTL +R +I PEP+W L T
Sbjct: 180 LRMQSEFASRNSENGDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLTGTF 239
Query: 62 NLNGE 66
++G+
Sbjct: 240 EMDGK 244
>gi|148642777|ref|YP_001273290.1| DNA topoisomerase I, TopA [Methanobrevibacter smithii ATCC 35061]
gi|148551794|gb|ABQ86922.1| DNA topoisomerase I, TopA [Methanobrevibacter smithii ATCC 35061]
Length = 716
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL V+R +I+ F P+PYWL+ L+
Sbjct: 196 LSAGRVQTPTLSILVDREKEIKKFVPKPYWLIKALLD 232
>gi|407704349|ref|YP_006827934.1| hypothetical protein MC28_1113 [Bacillus thuringiensis MC28]
gi|407382034|gb|AFU12535.1| DNA topoisomerase III [Bacillus thuringiensis MC28]
Length = 714
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIEDFKSEPFWEVFATFNIEGK 235
>gi|229115356|ref|ZP_04244764.1| DNA topoisomerase III [Bacillus cereus Rock1-3]
gi|423380246|ref|ZP_17357530.1| DNA topoisomerase III [Bacillus cereus BAG1O-2]
gi|423545226|ref|ZP_17521584.1| DNA topoisomerase III [Bacillus cereus HuB5-5]
gi|228668076|gb|EEL23510.1| DNA topoisomerase III [Bacillus cereus Rock1-3]
gi|401182694|gb|EJQ89824.1| DNA topoisomerase III [Bacillus cereus HuB5-5]
gi|401630998|gb|EJS48795.1| DNA topoisomerase III [Bacillus cereus BAG1O-2]
Length = 714
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIEDFKSEPFWEVFATFNIEGK 235
>gi|345866182|ref|ZP_08818210.1| DNA topoisomerase III family protein [Bizionia argentinensis JUB59]
gi|344049232|gb|EGV44828.1| DNA topoisomerase III family protein [Bizionia argentinensis JUB59]
Length = 770
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S G QTPTL V R +I FKP+PYW L
Sbjct: 186 VLSVGRVQTPTLAMVVNRFKEIENFKPQPYWEL 218
>gi|229096450|ref|ZP_04227422.1| DNA topoisomerase III [Bacillus cereus Rock3-29]
gi|423443276|ref|ZP_17420182.1| DNA topoisomerase III [Bacillus cereus BAG4X2-1]
gi|423446476|ref|ZP_17423355.1| DNA topoisomerase III [Bacillus cereus BAG5O-1]
gi|423466361|ref|ZP_17443129.1| DNA topoisomerase III [Bacillus cereus BAG6O-1]
gi|423535764|ref|ZP_17512182.1| DNA topoisomerase III [Bacillus cereus HuB2-9]
gi|423538997|ref|ZP_17515388.1| DNA topoisomerase III [Bacillus cereus HuB4-10]
gi|423625058|ref|ZP_17600836.1| DNA topoisomerase III [Bacillus cereus VD148]
gi|228687012|gb|EEL40918.1| DNA topoisomerase III [Bacillus cereus Rock3-29]
gi|401131848|gb|EJQ39496.1| DNA topoisomerase III [Bacillus cereus BAG5O-1]
gi|401176145|gb|EJQ83342.1| DNA topoisomerase III [Bacillus cereus HuB4-10]
gi|401255428|gb|EJR61649.1| DNA topoisomerase III [Bacillus cereus VD148]
gi|402413085|gb|EJV45434.1| DNA topoisomerase III [Bacillus cereus BAG4X2-1]
gi|402415793|gb|EJV48114.1| DNA topoisomerase III [Bacillus cereus BAG6O-1]
gi|402461817|gb|EJV93529.1| DNA topoisomerase III [Bacillus cereus HuB2-9]
Length = 714
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIEDFKSEPFWEVFATFNIEGK 235
>gi|229102543|ref|ZP_04233248.1| DNA topoisomerase III [Bacillus cereus Rock3-28]
gi|228680865|gb|EEL35037.1| DNA topoisomerase III [Bacillus cereus Rock3-28]
Length = 714
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ S G QTPTL V+R +I FK EP+W + T N+ G+
Sbjct: 194 VFSAGRVQTPTLALIVKREKEIEDFKSEPFWEVFATFNIEGK 235
>gi|91772728|ref|YP_565420.1| DNA topoisomerase [Methanococcoides burtonii DSM 6242]
gi|91711743|gb|ABE51670.1| DNA topoisomerase [Methanococcoides burtonii DSM 6242]
Length = 780
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
++S GPCQTPT GF ER IR F +W ++
Sbjct: 193 VLSIGPCQTPTCGFVYERELAIRKFDSRDFWKIE 226
>gi|371777547|ref|ZP_09483869.1| DNA topoisomerase III [Anaerophaga sp. HS1]
Length = 791
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG ++S G QTPTL V+R +I F P+PYW L
Sbjct: 176 YTLKYGQ-QGQVLSIGRVQTPTLALIVQRQKEIDNFVPQPYWEL 218
>gi|330506959|ref|YP_004383387.1| DNA topoisomerase I [Methanosaeta concilii GP6]
gi|328927767|gb|AEB67569.1| DNA topoisomerase I [Methanosaeta concilii GP6]
Length = 766
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G L +S G Q+PTL V+R +I++F P+PYW
Sbjct: 181 GRLGKEFLSVGRVQSPTLALIVDREKEIQSFVPKPYW 217
>gi|323344508|ref|ZP_08084733.1| DNA topoisomerase TopB [Prevotella oralis ATCC 33269]
gi|323094635|gb|EFZ37211.1| DNA topoisomerase TopB [Prevotella oralis ATCC 33269]
Length = 681
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I F PE YW+L
Sbjct: 176 YTLKYGK-NRQVLSIGRVQTPTLALIVNRQKEIDQFTPEAYWVL 218
>gi|154412191|ref|XP_001579129.1| DNA topoisomerase family protein [Trichomonas vaginalis G3]
gi|121913332|gb|EAY18143.1| DNA topoisomerase family protein [Trichomonas vaginalis G3]
Length = 662
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
+A LIS+GPCQ PTLGF VE PE +W ++
Sbjct: 200 NAELISFGPCQFPTLGFVVEAFFNHIKHVPESFWKIE 236
>gi|388581731|gb|EIM22038.1| prokaryotic type I DNA topoisomerase [Wallemia sebi CBS 633.66]
Length = 797
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L+ +NL + + +LD + GPCQ PTLGF V+++ +I+ F E +W + +++
Sbjct: 193 LMTMNLSK-----QIAELD---VHTGPCQFPTLGFVVDQYQRIKDFISEAFWYIFVSI 242
>gi|359781901|ref|ZP_09285124.1| DNA topoisomerase III [Pseudomonas psychrotolerans L19]
gi|359370271|gb|EHK70839.1| DNA topoisomerase III [Pseudomonas psychrotolerans L19]
Length = 672
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P P+W L++ L
Sbjct: 173 LFTLLGRQAGYSG--------VLSVGRVQTPTLRLVVDRDREIAHFVPVPFWSLEVLLAA 224
Query: 64 NGE 66
NG+
Sbjct: 225 NGQ 227
>gi|319954761|ref|YP_004166028.1| DNA topoisomerase iii [Cellulophaga algicola DSM 14237]
gi|319423421|gb|ADV50530.1| DNA topoisomerase III [Cellulophaga algicola DSM 14237]
Length = 773
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
Y K+G ++S G QTPTL V R+ +I +FK EPYW L
Sbjct: 176 YTVKHGGYK-QMLSVGRVQTPTLAMIVNRYKEIESFKSEPYWELQ 219
>gi|432331507|ref|YP_007249650.1| topoisomerase IA [Methanoregula formicicum SMSP]
gi|432138216|gb|AGB03143.1| topoisomerase IA [Methanoregula formicicum SMSP]
Length = 942
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+++S G QTPTL V+R +I F PE YW L L GE
Sbjct: 189 NILSVGRVQTPTLSMIVDREKEIVAFVPEKYWQLALDFEKRGE 231
>gi|336173660|ref|YP_004580798.1| DNA topoisomerase III [Lacinutrix sp. 5H-3-7-4]
gi|334728232|gb|AEH02370.1| DNA topoisomerase III [Lacinutrix sp. 5H-3-7-4]
Length = 765
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V R +I FKP+PYW L
Sbjct: 176 YTVKHGGYK-QVLSVGRVQTPTLAMLVNRFKEIENFKPQPYWEL 218
>gi|295112569|emb|CBL31206.1| DNA topoisomerase III, bacteria and conjugative plasmid
[Enterococcus sp. 7L76]
Length = 714
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L LNL++ QG + S G QTPTL +R + I FK EP++ ++ ++N+
Sbjct: 183 LYTLNLQQKGVQGTF--------SLGRVQTPTLYLIFQRQEAIENFKKEPFFEVEASINV 234
Query: 64 N 64
N
Sbjct: 235 N 235
>gi|304382211|ref|ZP_07364718.1| DNA topoisomerase TopB [Prevotella marshii DSM 16973]
gi|304336568|gb|EFM02797.1| DNA topoisomerase TopB [Prevotella marshii DSM 16973]
Length = 669
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
Y KYG ++S G QTPTL V R +I F+PE YW+L
Sbjct: 176 YTLKYGS-GRQVLSIGRVQTPTLALIVARQKEIENFQPEAYWVLS 219
>gi|300724290|ref|YP_003713608.1| DNA topoisomerase III [Xenorhabdus nematophila ATCC 19061]
gi|297630825|emb|CBJ91494.1| DNA topoisomerase III [Xenorhabdus nematophila ATCC 19061]
Length = 664
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 2 LDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
++L +L +A QG +G++ +S G QTPTL V R + I F+P+PYW + TL
Sbjct: 169 INLTRLYTLKAQAQG-FGEV----LSIGRVQTPTLALVVNRDNDIARFEPKPYWQVMATL 223
>gi|319643931|ref|ZP_07998506.1| DNA topoisomerase [Bacteroides sp. 3_1_40A]
gi|345518259|ref|ZP_08797713.1| DNA topoisomerase III [Bacteroides sp. 4_3_47FAA]
gi|254835554|gb|EET15863.1| DNA topoisomerase III [Bacteroides sp. 4_3_47FAA]
gi|317384455|gb|EFV65422.1| DNA topoisomerase [Bacteroides sp. 3_1_40A]
Length = 713
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V+R +I F P+ YW+L
Sbjct: 176 YTLKYGQ-NRQILSIGRVQTPTLALIVKRQQEIEHFTPQQYWIL 218
>gi|134287914|ref|YP_001110078.1| DNA topoisomerase [Burkholderia vietnamiensis G4]
gi|134132564|gb|ABO60190.1| DNA topoisomerase [Burkholderia vietnamiensis G4]
Length = 814
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
Y + GDLD S G Q PTL V+R DKIRTF + YW
Sbjct: 182 YTRETGDLDKH--STGRVQGPTLAIIVDREDKIRTFVSKDYW 221
>gi|333031500|ref|ZP_08459561.1| DNA topoisomerase III [Bacteroides coprosuis DSM 18011]
gi|332742097|gb|EGJ72579.1| DNA topoisomerase III [Bacteroides coprosuis DSM 18011]
Length = 629
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KY + + ++S G QTPTL V R ++I FKPE YW L
Sbjct: 176 YTLKYAN-NKQVLSVGRVQTPTLALIVNRQEEIDNFKPESYWEL 218
>gi|433545659|ref|ZP_20502009.1| DNA topoisomerase III [Brevibacillus agri BAB-2500]
gi|432183057|gb|ELK40608.1| DNA topoisomerase III [Brevibacillus agri BAB-2500]
Length = 726
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ S G QTPTL V+R +I FKPEP+W + T
Sbjct: 194 VFSAGRVQTPTLALVVKREKEIAAFKPEPFWEVKATF 230
>gi|399052184|ref|ZP_10741749.1| DNA topoisomerase III [Brevibacillus sp. CF112]
gi|398050050|gb|EJL42440.1| DNA topoisomerase III [Brevibacillus sp. CF112]
Length = 726
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ S G QTPTL V+R +I FKPEP+W + T
Sbjct: 194 VFSAGRVQTPTLALVVKREKEIAAFKPEPFWEVKATF 230
>gi|288553428|ref|YP_003425363.1| DNA topoisomerase III [Bacillus pseudofirmus OF4]
gi|288544588|gb|ADC48471.1| DNA topoisomerase III [Bacillus pseudofirmus OF4]
Length = 723
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+ S G QTPTL V+R +I FKPEP+W
Sbjct: 194 VFSTGRVQTPTLALIVKREKEIEAFKPEPFW 224
>gi|258515068|ref|YP_003191290.1| DNA topoisomerase III [Desulfotomaculum acetoxidans DSM 771]
gi|257778773|gb|ACV62667.1| DNA topoisomerase III [Desulfotomaculum acetoxidans DSM 771]
Length = 746
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW-LLDLTLNLNGE 66
L+S G QTPTL V R +IR F PE YW L L NG+
Sbjct: 184 LLSVGRVQTPTLALIVNREQEIRAFVPEKYWELFALFTKENGQ 226
>gi|374854996|dbj|BAL57864.1| DNA topoisomerase III [uncultured beta proteobacterium]
Length = 837
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 17/31 (54%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L G QTPTL VER IR F P PYW
Sbjct: 197 LTPVGRVQTPTLAMVVEREKAIRAFTPRPYW 227
>gi|91784576|ref|YP_559782.1| DNA topoisomerase III [Burkholderia xenovorans LB400]
gi|163855755|ref|YP_001630053.1| DNA topoisomerase III [Bordetella petrii DSM 12804]
gi|40019223|emb|CAE92947.1| putative DNA topoisomerase III [Pseudomonas putida]
gi|91688530|gb|ABE31730.1| DNA topoisomerase III [Burkholderia xenovorans LB400]
gi|163259483|emb|CAP41783.1| DNA topoisomerase III [Bordetella petrii]
Length = 670
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ +G+
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSASGQ 227
>gi|221064781|ref|ZP_03540886.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
gi|220709804|gb|EED65172.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
Length = 677
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|433185993|ref|ZP_20370217.1| DNA topoisomerase III [Escherichia coli KTE85]
gi|431700314|gb|ELJ65295.1| DNA topoisomerase III [Escherichia coli KTE85]
Length = 669
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
+ ++S G QTPTL V R +I+ F P PYW L+L L
Sbjct: 185 SGVLSIGRVQTPTLAMVVRRDAEIKNFIPVPYWQLNLWL 223
>gi|311104266|ref|YP_003977119.1| DNA topoisomerase III 1 [Achromobacter xylosoxidans A8]
gi|310758955|gb|ADP14404.1| DNA topoisomerase III 1 [Achromobacter xylosoxidans A8]
Length = 676
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|395444048|ref|YP_006384301.1| DNA topoisomerase III [Pseudomonas putida ND6]
gi|388558045|gb|AFK67186.1| DNA topoisomerase III [Pseudomonas putida ND6]
Length = 655
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
G+ D L+ G QTPTL VER I +F P+P+W +D L +G
Sbjct: 177 GRRAGFDG-LLPVGRVQTPTLRLVVERDRAIASFVPQPFWTVDAHLEQDG 225
>gi|298674647|ref|YP_003726397.1| DNA topoisomerase I [Methanohalobium evestigatum Z-7303]
gi|298287635|gb|ADI73601.1| DNA topoisomerase I [Methanohalobium evestigatum Z-7303]
Length = 742
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-NLNGE 66
G L +S G Q+PTL V+R + F P+PYW + TL N NGE
Sbjct: 185 GRLGKMFLSVGRVQSPTLALIVDREKEREAFVPDPYWEVYATLANSNGE 233
>gi|218133652|ref|ZP_03462456.1| hypothetical protein BACPEC_01521 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991027|gb|EEC57033.1| toprim domain protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 219
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+S G Q+ L +R D+I +F PE YW LD LN+ GE
Sbjct: 162 LSAGRVQSVALRIICDREDEINSFIPEEYWTLDAVLNVKGE 202
>gi|429741431|ref|ZP_19275091.1| DNA topoisomerase [Porphyromonas catoniae F0037]
gi|429158731|gb|EKY01263.1| DNA topoisomerase [Porphyromonas catoniae F0037]
Length = 684
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLD-ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG + +S G QTPTL VER I FKPE YW L
Sbjct: 180 YTLRYGQRERKQPLSIGRVQTPTLALIVERQQAIEQFKPETYWEL 224
>gi|254297110|ref|ZP_04964563.1| DNA topoisomerase III [Burkholderia pseudomallei 406e]
gi|157807142|gb|EDO84312.1| DNA topoisomerase III [Burkholderia pseudomallei 406e]
Length = 676
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F P P+W ++L L NG+
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLRLVVDRDREITRFVPVPFWAIELVLISNGQ 227
>gi|300118097|ref|ZP_07055845.1| DNA topoisomerase III [Bacillus cereus SJ1]
gi|298724408|gb|EFI65102.1| DNA topoisomerase III [Bacillus cereus SJ1]
Length = 443
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL + S G CQ+PTL +R +I PEP+W L T
Sbjct: 184 LRMQSEFASRNSENGDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLSGTF 243
Query: 62 NLNGE 66
++G+
Sbjct: 244 EVDGK 248
>gi|269986154|gb|EEZ92467.1| DNA topoisomerase type IA central domain protein [Candidatus
Parvarchaeum acidiphilum ARMAN-4]
Length = 703
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L S +S G QTPTL V R + R FKPE YW T+
Sbjct: 208 LGNSFLSIGRVQTPTLAIIVARDSERRAFKPEKYWRFTATI 248
>gi|196233437|ref|ZP_03132281.1| DNA topoisomerase III [Chthoniobacter flavus Ellin428]
gi|196222577|gb|EDY17103.1| DNA topoisomerase III [Chthoniobacter flavus Ellin428]
Length = 648
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
S + G QTPTL VER +KIR F+P YW
Sbjct: 187 SKTTAGRVQTPTLAILVEREEKIRAFEPRAYW 218
>gi|426409915|ref|YP_007030014.1| DNA topoisomerase III [Pseudomonas sp. UW4]
gi|426268132|gb|AFY20209.1| DNA topoisomerase III [Pseudomonas sp. UW4]
Length = 648
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQ 221
Query: 61 LNLNG 65
L NG
Sbjct: 222 LLHNG 226
>gi|66768382|ref|YP_243144.1| DNA topoisomerase III [Xanthomonas campestris pv. campestris str.
8004]
gi|66573714|gb|AAY49124.1| putative DNA topoisomerase III [Xanthomonas campestris pv.
campestris str. 8004]
Length = 670
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D+ L +G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFT 230
Query: 66 -EWVS 69
+WVS
Sbjct: 231 AQWVS 235
>gi|313203751|ref|YP_004042408.1| DNA topoisomerase iii [Paludibacter propionicigenes WB4]
gi|312443067|gb|ADQ79423.1| DNA topoisomerase III [Paludibacter propionicigenes WB4]
Length = 639
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I FKPE YW L
Sbjct: 176 YTLKYGK-NRQVLSIGRVQTPTLALIVNRQLEIENFKPEAYWEL 218
>gi|313107506|ref|ZP_07793693.1| DNA topoisomerase III [Pseudomonas aeruginosa 39016]
gi|310880195|gb|EFQ38789.1| DNA topoisomerase III [Pseudomonas aeruginosa 39016]
Length = 677
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQAFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|188991807|ref|YP_001903817.1| DNA topoisomerase III [Xanthomonas campestris pv. campestris str.
B100]
gi|167733567|emb|CAP51772.1| DNA topoisomerase III [Xanthomonas campestris pv. campestris]
Length = 670
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D+ L +G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFT 230
Query: 66 -EWVS 69
+WVS
Sbjct: 231 AQWVS 235
>gi|164686199|ref|ZP_02210229.1| hypothetical protein CLOBAR_02637 [Clostridium bartlettii DSM
16795]
gi|164601801|gb|EDQ95266.1| DNA topoisomerase [Clostridium bartlettii DSM 16795]
Length = 704
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGEWV 68
+ASL S G QTPTL +R D+IR FKP+ Y+ LD+ G ++
Sbjct: 183 NASL-SCGRVQTPTLAIISKREDEIRNFKPKDYYTLDVLTEKGGSYL 228
>gi|163788498|ref|ZP_02182944.1| DNA topoisomerase III [Flavobacteriales bacterium ALC-1]
gi|159876818|gb|EDP70876.1| DNA topoisomerase III [Flavobacteriales bacterium ALC-1]
Length = 741
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y K+G ++S G QTPTL V R +I FKP+PYW L
Sbjct: 176 YTVKHGGY-KQVLSVGRVQTPTLAMLVNRFKEIENFKPQPYWEL 218
>gi|399520318|ref|ZP_10761094.1| DNA topoisomerase III [Pseudomonas pseudoalcaligenes CECT 5344]
gi|419955430|ref|ZP_14471558.1| DNA topoisomerase III [Pseudomonas stutzeri TS44]
gi|387967741|gb|EIK52038.1| DNA topoisomerase III [Pseudomonas stutzeri TS44]
gi|399111759|emb|CCH37653.1| DNA topoisomerase III [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 670
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ +G+
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSASGQ 227
>gi|345861856|ref|ZP_08814105.1| DNA topoisomerase III family protein [Desulfosporosinus sp. OT]
gi|344325051|gb|EGW36580.1| DNA topoisomerase III family protein [Desulfosporosinus sp. OT]
Length = 725
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLN 62
+S G QTPTL VER ++IR F P+ YW + + +N
Sbjct: 186 LSAGRVQTPTLAMVVERENEIRQFVPKDYWSIKVLVN 222
>gi|398914365|ref|ZP_10656879.1| DNA topoisomerase III [Pseudomonas sp. GM49]
gi|398178506|gb|EJM66153.1| DNA topoisomerase III [Pseudomonas sp. GM49]
Length = 651
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 173 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQ 224
Query: 61 LNLNG 65
L NG
Sbjct: 225 LLHNG 229
>gi|323482877|ref|ZP_08088278.1| DNA topoisomerase 3 [Clostridium symbiosum WAL-14163]
gi|323403802|gb|EGA96099.1| DNA topoisomerase 3 [Clostridium symbiosum WAL-14163]
Length = 693
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
++I YG CQTP L +R D+I+ F P PY+ ++++
Sbjct: 192 AIIHYGRCQTPLLKLISDREDEIKKFVPTPYYEVEIS 228
>gi|297530124|ref|YP_003671399.1| DNA topoisomerase III [Geobacillus sp. C56-T3]
gi|297253376|gb|ADI26822.1| DNA topoisomerase III [Geobacillus sp. C56-T3]
Length = 697
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-N 62
L+ LN+ A KY D +S G QTPTL +ER +I++F P PYW + + +
Sbjct: 168 LIGLNVSRA-LTTKYNDP----LSAGRVQTPTLAMIIEREREIQSFVPVPYWTIRAKIGS 222
Query: 63 LNGEW 67
+ G W
Sbjct: 223 ITGVW 227
>gi|398894760|ref|ZP_10646833.1| DNA topoisomerase III [Pseudomonas sp. GM55]
gi|398181904|gb|EJM69446.1| DNA topoisomerase III [Pseudomonas sp. GM55]
Length = 649
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQ 221
Query: 61 LNLNG 65
L NG
Sbjct: 222 LLHNG 226
>gi|398932365|ref|ZP_10665608.1| DNA topoisomerase III [Pseudomonas sp. GM48]
gi|398162137|gb|EJM50344.1| DNA topoisomerase III [Pseudomonas sp. GM48]
Length = 648
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQ 221
Query: 61 LNLNG 65
L NG
Sbjct: 222 LLHNG 226
>gi|238892823|ref|YP_002917557.1| putative DNA topoisomerase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238545139|dbj|BAH61490.1| putative DNA topoisomerase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 563
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G QTPTL VER +I F P P+W +D L+ G
Sbjct: 139 VLSVGRVQTPTLRLVVERDREISRFTPRPWWRVDARLHAEG 179
>gi|402782673|ref|YP_006638219.1| DNA topoisomerase III [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402543522|gb|AFQ67671.1| DNA topoisomerase III [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 608
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G QTPTL VER +I F P P+W +D L+ G
Sbjct: 184 VLSVGRVQTPTLRLVVERDREISRFTPRPWWRVDARLHAEG 224
>gi|281421187|ref|ZP_06252186.1| DNA topoisomerase III [Prevotella copri DSM 18205]
gi|281404722|gb|EFB35402.1| DNA topoisomerase III [Prevotella copri DSM 18205]
Length = 714
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I F EPYW+L
Sbjct: 176 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQKEIDNFVSEPYWVL 218
>gi|289628770|ref|ZP_06461724.1| DNA topoisomerase III [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|422579889|ref|ZP_16655405.1| DNA topoisomerase III [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330870237|gb|EGH04946.1| DNA topoisomerase III [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 673
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 173 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPQPFWNLDVQLCT 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 AGHSFLAKWVA 235
>gi|121593711|ref|YP_985607.1| DNA topoisomerase III [Acidovorax sp. JS42]
gi|120605791|gb|ABM41531.1| DNA topoisomerase III [Acidovorax sp. JS42]
Length = 670
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|402844700|ref|ZP_10893051.1| DNA topoisomerase III [Klebsiella sp. OBRC7]
gi|402273433|gb|EJU22634.1| DNA topoisomerase III [Klebsiella sp. OBRC7]
Length = 608
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G QTPTL VER +I F P P+W +D L+ G
Sbjct: 184 VLSVGRVQTPTLRLVVERDREISRFTPRPWWRVDARLHTGG 224
>gi|422407903|ref|ZP_16484866.1| DNA topoisomerase III, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330885773|gb|EGH19922.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. race
4]
Length = 601
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 173 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPQPFWNLDVQLCT 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 AGHSFLAKWVA 235
>gi|290559067|gb|EFD92440.1| DNA topoisomerase I [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 263
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L S +S G QTPTL VER + R FKPE +W
Sbjct: 187 LGNSFLSIGRVQTPTLALIVERDAERRAFKPEKFW 221
>gi|121593835|ref|YP_985731.1| DNA topoisomerase III [Acidovorax sp. JS42]
gi|120605915|gb|ABM41655.1| DNA topoisomerase III [Acidovorax sp. JS42]
Length = 670
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|444379664|ref|ZP_21178840.1| DNA topoisomerase III [Enterovibrio sp. AK16]
gi|443676253|gb|ELT82958.1| DNA topoisomerase III [Enterovibrio sp. AK16]
Length = 647
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
K+A YQG ++S G QTP LG V R +I F P+P++ LD + G
Sbjct: 186 KQAGYQG--------VLSVGRVQTPVLGLVVRRDREIEAFIPKPFYQLDAVIPYQG 233
>gi|430837767|ref|ZP_19455723.1| hypothetical protein OGK_05295, partial [Enterococcus faecium
E0680]
gi|430487002|gb|ELA63791.1| hypothetical protein OGK_05295, partial [Enterococcus faecium
E0680]
Length = 137
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 7 LNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
LNL++ QG + S G QTPTL +R + I FK EP++ ++ ++ +N
Sbjct: 4 LNLQQKGVQGTF--------SLGRVQTPTLYLIFQRQEAIENFKKEPFFEVEASIKVN 53
>gi|301386283|ref|ZP_07234701.1| DNA topoisomerase III [Pseudomonas syringae pv. tomato Max13]
Length = 565
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 65 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDIQLCT 116
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 117 AGHSFLAKWVA 127
>gi|220935984|ref|YP_002514883.1| DNA topoisomerase III [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997294|gb|ACL73896.1| DNA topoisomerase III [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 671
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ + YQG ++S G QTPTL V+R +I F PYW +D+TL+ G+
Sbjct: 179 RRSGYQG--------VLSVGRVQTPTLKLVVDRDREIARFVSVPYWTIDVTLSHAGQ 227
>gi|182414813|ref|YP_001819879.1| DNA topoisomerase III [Opitutus terrae PB90-1]
gi|177842027|gb|ACB76279.1| DNA topoisomerase III [Opitutus terrae PB90-1]
Length = 939
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L+ +N A + +G ++ S G QTPTL R +IR FKP YW + T +
Sbjct: 169 LIGINGTRALTKRMFGSRAGNVASVGRVQTPTLAIVYSRELEIRNFKPRAYWQITATFEV 228
Query: 64 -NGEW 67
NG +
Sbjct: 229 TNGRY 233
>gi|334341061|ref|YP_004546041.1| DNA topoisomerase III [Desulfotomaculum ruminis DSM 2154]
gi|334092415|gb|AEG60755.1| DNA topoisomerase III [Desulfotomaculum ruminis DSM 2154]
Length = 804
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+++S G QTPTL V R +I+ FKP PYW
Sbjct: 182 GTVLSVGRVQTPTLNLMVVREREIKNFKPSPYW 214
>gi|422623256|ref|ZP_16691109.1| DNA topoisomerase III, partial [Pseudomonas syringae pv. pisi str.
1704B]
gi|330946885|gb|EGH47726.1| DNA topoisomerase III [Pseudomonas syringae pv. pisi str. 1704B]
Length = 176
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L G
Sbjct: 96 RQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDVQLCAAGHSFL 147
Query: 66 -EWVS 69
+WV+
Sbjct: 148 AKWVA 152
>gi|291286769|ref|YP_003503585.1| DNA topoisomerase I [Denitrovibrio acetiphilus DSM 12809]
gi|290883929|gb|ADD67629.1| DNA topoisomerase I [Denitrovibrio acetiphilus DSM 12809]
Length = 782
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 17 KYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
KYG +S G Q+ L VER ++I FKPE YWL+D+T
Sbjct: 160 KYG------LSAGRVQSVALRLLVEREEEIEKFKPEEYWLIDVTF 198
>gi|437836587|ref|ZP_20845686.1| putative DNA topoisomerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435299217|gb|ELO75381.1| putative DNA topoisomerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 608
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G QTPTL VER +I F P P+W +D L+ G
Sbjct: 184 VLSVGRVQTPTLRLVVERDREIARFTPRPWWRVDARLHAEG 224
>gi|229113207|ref|ZP_04242702.1| DNA topoisomerase III [Bacillus cereus Rock1-15]
gi|228670233|gb|EEL25581.1| DNA topoisomerase III [Bacillus cereus Rock1-15]
Length = 756
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 LKLNLKEADYQGKYGDLDA---SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL 61
L++ + A + GDL+ + S G CQ+PTL +R +I PEP+W L
Sbjct: 180 LRMQSEFASRNAENGDLNGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLSGIF 239
Query: 62 NLNGE 66
++G+
Sbjct: 240 EIDGK 244
>gi|407801483|ref|ZP_11148327.1| DNA topoisomerase III [Alcanivorax sp. W11-5]
gi|407024920|gb|EKE36663.1| DNA topoisomerase III [Alcanivorax sp. W11-5]
Length = 671
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ + YQG ++S G QTPTL V+R +I F PYW +D+TL+ G+
Sbjct: 179 RRSGYQG--------VLSVGRVQTPTLKLVVDRDREIARFVSVPYWTIDVTLSHAGQ 227
>gi|339245545|ref|XP_003378698.1| DNA topoisomerase 3-alpha [Trichinella spiralis]
gi|316972379|gb|EFV56057.1| DNA topoisomerase 3-alpha [Trichinella spiralis]
Length = 870
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
L LISYG CQ PTLG V+R+ + + F E +W L
Sbjct: 202 LGDKLISYGSCQFPTLGLVVDRYKQNQAFICETFWKL 238
>gi|123431134|ref|XP_001308043.1| DNA topoisomerase family protein [Trichomonas vaginalis G3]
gi|121889702|gb|EAX95113.1| DNA topoisomerase family protein [Trichomonas vaginalis G3]
Length = 644
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 22 DASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
DA LIS+G CQ PTLGF VE PE +W +D
Sbjct: 200 DADLISFGSCQFPTLGFVVEAFLNHIKHVPEYFWKID 236
>gi|387929442|ref|ZP_10132119.1| DNA topoisomerase III [Bacillus methanolicus PB1]
gi|387586260|gb|EIJ78584.1| DNA topoisomerase III [Bacillus methanolicus PB1]
Length = 723
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
+ + S G QTPTL V+R +I F+ EPYW ++NG+
Sbjct: 192 SDVFSTGRVQTPTLALIVKREKEIENFQSEPYWEAAAIFHMNGK 235
>gi|161617488|ref|YP_001591453.1| DNA topoisomerase III [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161366852|gb|ABX70620.1| hypothetical protein SPAB_05347 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 669
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EWV 68
+IS G QTPTL V R +I TF P+P+W + L+ G +WV
Sbjct: 187 VISVGRVQTPTLALVVRRDREIATFVPKPFWQVKALLSAGGRTFPAQWV 235
>gi|156341490|ref|XP_001620777.1| hypothetical protein NEMVEDRAFT_v1g222712 [Nematostella vectensis]
gi|156206103|gb|EDO28677.1| predicted protein [Nematostella vectensis]
Length = 231
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Y K+G ++S G QTPTL V R+ +I F P+PYW L T
Sbjct: 176 YTVKFGGYK-QVLSIGRVQTPTLAMLVNRYKEIEHFTPKPYWELQTT 221
>gi|404330510|ref|ZP_10970958.1| DNA topoisomerase III [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 701
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTL-N 62
L+ LN+ A KY D +S G QTPTL ++R +IR+F+P P+W + + +
Sbjct: 169 LVGLNVSRA-LTTKYNDS----LSAGRVQTPTLAMILKRDQEIRSFRPVPFWTIHVQAGS 223
Query: 63 LNGEW 67
++ +W
Sbjct: 224 ISADW 228
>gi|444921087|ref|ZP_21240925.1| DNA topoisomerase 1 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507823|gb|ELV07997.1| DNA topoisomerase 1 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 827
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
+S G QTP L ER D I FKPE YW ++ L N
Sbjct: 166 LSAGRVQTPALRMICEREDAIEAFKPEEYWTIESQLKHN 204
>gi|262274572|ref|ZP_06052383.1| DNA topoisomerase III [Grimontia hollisae CIP 101886]
gi|262221135|gb|EEY72449.1| DNA topoisomerase III [Grimontia hollisae CIP 101886]
Length = 661
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
K+A YQG ++S G QTP LG V R +I F P+P++ LD + G
Sbjct: 207 KQAGYQG--------VLSVGRVQTPVLGLVVRRDREIEAFVPKPFYQLDAVIPYQG 254
>gi|77459223|ref|YP_348730.1| DNA topoisomerase III [Pseudomonas fluorescens Pf0-1]
gi|77383226|gb|ABA74739.1| DNA topoisomerase III [Pseudomonas fluorescens Pf0-1]
Length = 655
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++S G QTPTL V+R I +F P PYW +D+ L+ G+
Sbjct: 186 VLSVGRVQTPTLRLVVDRDRAIASFVPVPYWTVDVHLSSMGQ 227
>gi|336113968|ref|YP_004568735.1| DNA topoisomerase III [Bacillus coagulans 2-6]
gi|335367398|gb|AEH53349.1| DNA topoisomerase III [Bacillus coagulans 2-6]
Length = 721
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN-----GEWV 68
+ S G QTPTL V+R +I FKPEP+W + + G+WV
Sbjct: 196 VFSVGRVQTPTLALIVKRELEIEHFKPEPFWEVTAMFQFDDKQYEGKWV 244
>gi|424777948|ref|ZP_18204906.1| DNA topoisomerase III [Alcaligenes sp. HPC1271]
gi|422887287|gb|EKU29693.1| DNA topoisomerase III [Alcaligenes sp. HPC1271]
Length = 670
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G+
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQ 227
>gi|331001054|ref|ZP_08324685.1| DNA topoisomerase [Parasutterella excrementihominis YIT 11859]
gi|329569359|gb|EGG51137.1| DNA topoisomerase [Parasutterella excrementihominis YIT 11859]
Length = 615
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
LL +NL A K + +LI+ G QTPTL +R IR FKP P++ + T++
Sbjct: 178 LLGMNLTRALTLKKALSGERTLIAVGRVQTPTLSLVAKRDQDIRNFKPIPFFTIKCTVS- 236
Query: 64 NG 65
NG
Sbjct: 237 NG 238
>gi|347753624|ref|YP_004861189.1| DNA topoisomerase III [Bacillus coagulans 36D1]
gi|347586142|gb|AEP02409.1| DNA topoisomerase III [Bacillus coagulans 36D1]
Length = 721
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN-----GEWV 68
+ S G QTPTL V+R +I FKPEP+W + + G+WV
Sbjct: 196 VFSVGRVQTPTLALIVKRELEIEHFKPEPFWEVTAMFQFDDKQYEGKWV 244
>gi|421483626|ref|ZP_15931199.1| DNA topoisomerase [Achromobacter piechaudii HLE]
gi|400197909|gb|EJO30872.1| DNA topoisomerase [Achromobacter piechaudii HLE]
Length = 848
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN-GEWVS 69
S G QTPTL V + IR+F P PYW L T + GE+V+
Sbjct: 190 SLGRVQTPTLAIVVHQELAIRSFVPRPYWELHATFAVQAGEYVA 233
>gi|395645621|ref|ZP_10433481.1| DNA topoisomerase type IA central domain protein [Methanofollis
liminatans DSM 4140]
gi|395442361|gb|EJG07118.1| DNA topoisomerase type IA central domain protein [Methanofollis
liminatans DSM 4140]
Length = 942
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 23 ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
A+++S G Q+PTL +R +I +F P+ YW+L L +G
Sbjct: 188 ANILSVGRVQSPTLAMIADREKEIESFVPQKYWMLTLDTKKDG 230
>gi|422669301|ref|ZP_16729149.1| DNA topoisomerase III, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330981658|gb|EGH79761.1| DNA topoisomerase III [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 330
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 98 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 149
Query: 61 L 61
L
Sbjct: 150 L 150
>gi|257486056|ref|ZP_05640097.1| DNA topoisomerase III, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 527
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 40 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 91
Query: 61 L 61
L
Sbjct: 92 L 92
>gi|78047843|ref|YP_364018.1| DNA topoisomerase III [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036273|emb|CAJ23964.1| DNA topoisomerase III [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 670
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D+ L +G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFT 230
Query: 66 -EWVS 69
+W+S
Sbjct: 231 AQWIS 235
>gi|404485896|ref|ZP_11021092.1| DNA topoisomerase III [Barnesiella intestinihominis YIT 11860]
gi|404337807|gb|EJZ64257.1| DNA topoisomerase III [Barnesiella intestinihominis YIT 11860]
Length = 717
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y KYG + ++S G QTPTL V R +I F P+PYW L
Sbjct: 206 YTLKYGQ-NRQVLSIGRVQTPTLALIVNRQLEIEHFVPQPYWEL 248
>gi|294495850|ref|YP_003542343.1| DNA topoisomerase I [Methanohalophilus mahii DSM 5219]
gi|292666849|gb|ADE36698.1| DNA topoisomerase I [Methanohalophilus mahii DSM 5219]
Length = 737
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 21 LDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
L +S G Q+PTL V+R + F P PYW + + L+ NGE
Sbjct: 186 LGKQFLSVGRVQSPTLALIVDREKEREAFVPTPYWEIYVDLSKNGE 231
>gi|213971943|ref|ZP_03400042.1| DNA topoisomerase III [Pseudomonas syringae pv. tomato T1]
gi|302131388|ref|ZP_07257378.1| DNA topoisomerase III [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213923314|gb|EEB56910.1| DNA topoisomerase III [Pseudomonas syringae pv. tomato T1]
Length = 673
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 173 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDIQLCT 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 AGHSFLAKWVA 235
>gi|289673400|ref|ZP_06494290.1| DNA topoisomerase III, partial [Pseudomonas syringae pv. syringae
FF5]
Length = 168
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 16 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 67
Query: 61 L 61
L
Sbjct: 68 L 68
>gi|327400378|ref|YP_004341217.1| DNA topoisomerase I [Archaeoglobus veneficus SNP6]
gi|327315886|gb|AEA46502.1| DNA topoisomerase I [Archaeoglobus veneficus SNP6]
Length = 667
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
G + +S G Q+PTL VER +I F+P PYW
Sbjct: 183 GRMGRDFLSVGRVQSPTLRLIVEREKEIENFRPTPYW 219
>gi|319764660|ref|YP_004128597.1| DNA topoisomerase [Alicycliphilus denitrificans BC]
gi|317119221|gb|ADV01710.1| DNA topoisomerase [Alicycliphilus denitrificans BC]
Length = 390
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F PYW +D++L+ G
Sbjct: 179 RQAGYDG--------VLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFT 230
Query: 66 -EWVS 69
+WV+
Sbjct: 231 AQWVA 235
>gi|343087120|ref|YP_004776415.1| DNA topoisomerase III [Cyclobacterium marinum DSM 745]
gi|342355654|gb|AEL28184.1| DNA topoisomerase III [Cyclobacterium marinum DSM 745]
Length = 767
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLD 58
Y K+G ++S G QTPTL V R +I+ F+P+PYW L
Sbjct: 176 YTVKHGGYK-QVLSIGRVQTPTLAMIVNRFKEIQNFQPQPYWELQ 219
>gi|296506524|ref|YP_003667758.1| DNA topoisomerase III [Bacillus thuringiensis BMB171]
gi|296327111|gb|ADH10038.1| DNA topoisomerase III [Bacillus thuringiensis BMB171]
Length = 760
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 16 GKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
G L + S G CQ+PTL +R +I PEP+W L T ++G+
Sbjct: 198 GDLSGLKREVFSIGRCQSPTLRLVYDRIKQIEAHVPEPFWTLTGTFEVDGK 248
>gi|433445475|ref|ZP_20409861.1| DNA topoisomerase III [Anoxybacillus flavithermus TNO-09.006]
gi|432001025|gb|ELK21911.1| DNA topoisomerase III [Anoxybacillus flavithermus TNO-09.006]
Length = 411
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 26 ISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
+S G QTPTL +ER +I++F+P PYW +
Sbjct: 185 LSAGRVQTPTLAMIIEREKEIQSFQPVPYWTI 216
>gi|385873094|gb|AFI91614.1| DNA topoisomerase [Pectobacterium sp. SCC3193]
Length = 670
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG-----EWV 68
L+S G QTP L V R +I F P+PYW + + L NG +WV
Sbjct: 187 LLSVGRVQTPVLAMVVNREREIAAFVPKPYWQVWVALQSNGVRFSAQWV 235
>gi|385208335|ref|ZP_10035203.1| DNA topoisomerase III [Burkholderia sp. Ch1-1]
gi|385180673|gb|EIF29949.1| DNA topoisomerase III [Burkholderia sp. Ch1-1]
Length = 671
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNGE 66
++A Y G ++S G QTPTL V+R +I F PYW +++TL+ +G+
Sbjct: 179 RQAGYSG--------VLSVGRVQTPTLKLVVDRDREITRFVAVPYWAIEVTLSASGQ 227
>gi|448310602|ref|ZP_21500418.1| DNA topoisomerase I [Natronolimnobius innermongolicus JCM 12255]
gi|445607749|gb|ELY61625.1| DNA topoisomerase I [Natronolimnobius innermongolicus JCM 12255]
Length = 827
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 19 GDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL--DLT 60
G L IS G Q+PTL V+R +I+ F PE YW L DLT
Sbjct: 181 GQLGNDFISVGRVQSPTLKLIVDREREIQAFDPETYWELFADLT 224
>gi|359780948|ref|ZP_09284173.1| DNA topoisomerase III [Pseudomonas psychrotolerans L19]
gi|359371008|gb|EHK71574.1| DNA topoisomerase III [Pseudomonas psychrotolerans L19]
Length = 652
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L + + YQG ++S G QTPTL V+R I F P P+W ++ T
Sbjct: 170 MSRLFTLLGRRSGYQG--------VLSVGRVQTPTLRLVVDRDRAIAAFVPVPFWTVEAT 221
Query: 61 LNLNG 65
L+ +G
Sbjct: 222 LDASG 226
>gi|422609173|ref|ZP_16681127.1| DNA topoisomerase III [Pseudomonas syringae pv. mori str. 301020]
gi|330894800|gb|EGH27461.1| DNA topoisomerase III [Pseudomonas syringae pv. mori str. 301020]
Length = 501
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 10 KEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG---- 65
++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L G
Sbjct: 7 RQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDVQLCAAGHSFL 58
Query: 66 -EWVS 69
+WV+
Sbjct: 59 AKWVA 63
>gi|317128730|ref|YP_004095012.1| DNA topoisomerase III [Bacillus cellulosilyticus DSM 2522]
gi|315473678|gb|ADU30281.1| DNA topoisomerase III [Bacillus cellulosilyticus DSM 2522]
Length = 723
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN-----GEW 67
+ S G QTPTL V+R +I TFK E +W + T ++N G+W
Sbjct: 194 IFSIGRVQTPTLALIVQREKEIETFKQEEFWEVVATFHMNNNQYKGKW 241
>gi|423344840|ref|ZP_17322529.1| DNA topoisomerase III [Parabacteroides merdae CL03T12C32]
gi|409224431|gb|EKN17364.1| DNA topoisomerase III [Parabacteroides merdae CL03T12C32]
Length = 697
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
S G QTPTLG ER+ + R F PE +W L + +N N
Sbjct: 193 SVGRVQTPTLGMVCERYWENRRFTPEAFWQLHIAVNGN 230
>gi|409196177|ref|ZP_11224840.1| DNA topoisomerase III [Marinilabilia salmonicolor JCM 21150]
Length = 793
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 14 YQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
Y KYG ++S G QTPTL V+R+ +I F P+ YW L T
Sbjct: 176 YTLKYGQ-QGQVLSIGRVQTPTLALIVDRYKEIENFVPQTYWELKTT 221
>gi|317481283|ref|ZP_07940354.1| DNA topoisomerase III [Bacteroides sp. 4_1_36]
gi|316902616|gb|EFV24499.1| DNA topoisomerase III [Bacteroides sp. 4_1_36]
Length = 697
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
S G QTPTLG ER+ + R F PE +W L + +N N
Sbjct: 193 SVGRVQTPTLGMVCERYWENRRFTPEAFWQLHIAVNGN 230
>gi|432614691|ref|ZP_19850829.1| DNA topoisomerase III [Escherichia coli KTE75]
gi|431158883|gb|ELE59474.1| DNA topoisomerase III [Escherichia coli KTE75]
Length = 465
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
++S G QTPTL VER +I F P P+W +D L+ G
Sbjct: 184 VLSVGRVQTPTLRLVVERDREIARFTPRPWWRVDARLHAEG 224
>gi|402847498|ref|ZP_10895782.1| DNA topoisomerase III [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266356|gb|EJU15795.1| DNA topoisomerase III [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 679
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 YQGKYGDLD-ASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
Y +YG D +S G QTPTL VER + I FK E YW L
Sbjct: 180 YTLRYGGSDRKQPLSIGRVQTPTLALIVERQEAIENFKSETYWEL 224
>gi|293602302|ref|ZP_06684748.1| DNA topoisomerase TopB [Achromobacter piechaudii ATCC 43553]
gi|292819064|gb|EFF78099.1| DNA topoisomerase TopB [Achromobacter piechaudii ATCC 43553]
Length = 848
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN-GEWVS 69
S G QTPTL V + IR+F P PYW L T + GE+V+
Sbjct: 189 SVGRVQTPTLAIVVHQELAIRSFIPRPYWELHATFAVQAGEYVA 232
>gi|407399794|gb|EKF28434.1| DNA topoisomerase III, putative [Trypanosoma cruzi marinkellei]
Length = 917
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF V RH + F E ++ L
Sbjct: 200 VLSFGPCQIPTLGFVVRRHREREGFVQEDFFTL 232
>gi|422591275|ref|ZP_16665921.1| DNA topoisomerase III [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330878671|gb|EGH12820.1| DNA topoisomerase III [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 673
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 173 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDVQLCA 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 AGHSFLAKWVA 235
>gi|416014141|ref|ZP_11562039.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. B076]
gi|320326200|gb|EFW82255.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. B076]
Length = 673
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L ++A Y G ++S G QTPTL V+R +I F P+P+W LD+ L
Sbjct: 173 LFTLLGRQAGYTG--------VLSVGRVQTPTLRLVVDRDREIANFIPKPFWNLDVQLCA 224
Query: 64 NG-----EWVS 69
G +WV+
Sbjct: 225 AGHSFLAKWVA 235
>gi|56900852|gb|AAW31721.1| DNA topoisomerase III alpha [Trypanosoma cruzi]
Length = 921
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF V RH + F E ++ L
Sbjct: 200 VLSFGPCQIPTLGFVVRRHREREGFVQEDFFTL 232
>gi|71654804|ref|XP_816014.1| DNA topoisomerase III [Trypanosoma cruzi strain CL Brener]
gi|70881114|gb|EAN94163.1| DNA topoisomerase III, putative [Trypanosoma cruzi]
Length = 921
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF V RH + F E ++ L
Sbjct: 200 VLSFGPCQIPTLGFVVRRHREREGFVQEDFFTL 232
>gi|71651605|ref|XP_814477.1| DNA topoisomerase III [Trypanosoma cruzi strain CL Brener]
gi|70879452|gb|EAN92626.1| DNA topoisomerase III, putative [Trypanosoma cruzi]
Length = 921
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYWLL 57
++S+GPCQ PTLGF V RH + F E ++ L
Sbjct: 200 VLSFGPCQIPTLGFVVRRHREREGFVQEDFFTL 232
>gi|76579672|gb|ABA49147.1| DNA topoisomerase III [Burkholderia pseudomallei 1710b]
Length = 905
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 226 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 256
>gi|312797606|ref|YP_004030528.1| DNA topoisomerase III [Burkholderia rhizoxinica HKI 454]
gi|312169381|emb|CBW76384.1| DNA topoisomerase III (EC 5.99.1.2) [Burkholderia rhizoxinica HKI
454]
Length = 913
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 211 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 241
>gi|170697719|ref|ZP_02888806.1| DNA topoisomerase III [Burkholderia ambifaria IOP40-10]
gi|170137334|gb|EDT05575.1| DNA topoisomerase III [Burkholderia ambifaria IOP40-10]
Length = 865
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|126453699|ref|YP_001064439.1| DNA topoisomerase III [Burkholderia pseudomallei 1106a]
gi|242315546|ref|ZP_04814562.1| DNA topoisomerase III [Burkholderia pseudomallei 1106b]
gi|386860237|ref|YP_006273186.1| DNA topoisomerase III [Burkholderia pseudomallei 1026b]
gi|403516811|ref|YP_006650944.1| DNA topoisomerase III [Burkholderia pseudomallei BPC006]
gi|418375555|ref|ZP_12965629.1| DNA topoisomerase III [Burkholderia pseudomallei 354a]
gi|418537464|ref|ZP_13103104.1| DNA topoisomerase III [Burkholderia pseudomallei 1026a]
gi|418545229|ref|ZP_13110489.1| DNA topoisomerase III [Burkholderia pseudomallei 1258a]
gi|418551621|ref|ZP_13116531.1| DNA topoisomerase III [Burkholderia pseudomallei 1258b]
gi|418552166|ref|ZP_13117056.1| DNA topoisomerase III [Burkholderia pseudomallei 354e]
gi|126227341|gb|ABN90881.1| DNA topoisomerase III [Burkholderia pseudomallei 1106a]
gi|242138785|gb|EES25187.1| DNA topoisomerase III [Burkholderia pseudomallei 1106b]
gi|385346520|gb|EIF53196.1| DNA topoisomerase III [Burkholderia pseudomallei 1258a]
gi|385347340|gb|EIF53997.1| DNA topoisomerase III [Burkholderia pseudomallei 1258b]
gi|385350173|gb|EIF56725.1| DNA topoisomerase III [Burkholderia pseudomallei 1026a]
gi|385373563|gb|EIF78583.1| DNA topoisomerase III [Burkholderia pseudomallei 354e]
gi|385378252|gb|EIF82733.1| DNA topoisomerase III [Burkholderia pseudomallei 354a]
gi|385657365|gb|AFI64788.1| DNA topoisomerase III [Burkholderia pseudomallei 1026b]
gi|403072455|gb|AFR14035.1| DNA topoisomerase III [Burkholderia pseudomallei BPC006]
Length = 906
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 227 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 257
>gi|115353236|ref|YP_775075.1| DNA topoisomerase III [Burkholderia ambifaria AMMD]
gi|115283224|gb|ABI88741.1| DNA topoisomerase III [Burkholderia ambifaria AMMD]
Length = 865
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|402565106|ref|YP_006614451.1| DNA topoisomerase III [Burkholderia cepacia GG4]
gi|402246303|gb|AFQ46757.1| DNA topoisomerase III [Burkholderia cepacia GG4]
Length = 865
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|413963946|ref|ZP_11403173.1| DNA topoisomerase III [Burkholderia sp. SJ98]
gi|413929778|gb|EKS69066.1| DNA topoisomerase III [Burkholderia sp. SJ98]
Length = 881
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|378768969|ref|YP_005197444.1| DNA topoisomerase III [Pantoea ananatis LMG 5342]
gi|365188457|emb|CCF11407.1| DNA topoisomerase III [Pantoea ananatis LMG 5342]
Length = 672
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L L EA ++G ++S G QTPTL V R +I F P+P+W + L+
Sbjct: 174 LYTLRAAEAGFEG--------VVSVGRVQTPTLALVVRRDREIAAFVPKPFWQVKAVLSA 225
Query: 64 NG 65
+G
Sbjct: 226 SG 227
>gi|422681063|ref|ZP_16739333.1| DNA topoisomerase III [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|331010407|gb|EGH90463.1| DNA topoisomerase III [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 657
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 221
Query: 61 L 61
L
Sbjct: 222 L 222
>gi|294776309|ref|ZP_06741792.1| DNA topoisomerase [Bacteroides vulgatus PC510]
gi|294449849|gb|EFG18366.1| DNA topoisomerase [Bacteroides vulgatus PC510]
Length = 521
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 27 SYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLN 64
S G QTPTLG ER+ + R F PE +W L + +N N
Sbjct: 17 SVGRVQTPTLGMVCERYWENRRFTPEAFWQLHIAVNGN 54
>gi|124485959|ref|YP_001030575.1| hypothetical protein Mlab_1139 [Methanocorpusculum labreanum Z]
gi|124363500|gb|ABN07308.1| DNA topoisomerase, type IA, central domain protein
[Methanocorpusculum labreanum Z]
Length = 935
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNLNG 65
S++S G Q+PTL V+R +I F P YW+L L +G
Sbjct: 189 SILSVGRVQSPTLAMIVDREREIEAFVPTKYWMLSLATEKSG 230
>gi|172062108|ref|YP_001809760.1| DNA topoisomerase III [Burkholderia ambifaria MC40-6]
gi|171994625|gb|ACB65544.1| DNA topoisomerase III [Burkholderia ambifaria MC40-6]
Length = 865
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|418453243|ref|ZP_13024557.1| hypothetical protein MQS_02423 [Staphylococcus aureus subsp.
aureus VRS10]
gi|387741110|gb|EIK27981.1| hypothetical protein MQS_02423 [Staphylococcus aureus subsp.
aureus VRS10]
Length = 150
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 4 LLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLTLNL 63
L LNL++ QG + S G QTPTL +R + I FK EP++ ++ ++ +
Sbjct: 39 LYTLNLQQKGVQGTF--------SLGRVQTPTLYLIFQRQEAIENFKKEPFFEVEASIKV 90
Query: 64 N 64
N
Sbjct: 91 N 91
>gi|422595795|ref|ZP_16670081.1| DNA topoisomerase III [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330986098|gb|EGH84201.1| DNA topoisomerase III [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 657
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 221
Query: 61 L 61
L
Sbjct: 222 L 222
>gi|422404826|ref|ZP_16481876.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. race
4]
gi|330878693|gb|EGH12842.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. race
4]
Length = 657
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 221
Query: 61 L 61
L
Sbjct: 222 L 222
>gi|416017156|ref|ZP_11564275.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. B076]
gi|416027609|ref|ZP_11570813.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. race
4]
gi|320323618|gb|EFW79702.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. B076]
gi|320328254|gb|EFW84258.1| DNA topoisomerase III [Pseudomonas syringae pv. glycinea str. race
4]
Length = 657
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1 MLDLLKLNLKEADYQGKYGDLDASLISYGPCQTPTLGFCVERHDKIRTFKPEPYWLLDLT 60
M L L +++ YQG ++ G QTPTL V+R I F P PYW +D+
Sbjct: 170 MSRLFTLLGRQSGYQG--------VLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVR 221
Query: 61 L 61
L
Sbjct: 222 L 222
>gi|254197083|ref|ZP_04903506.1| DNA topoisomerase III [Burkholderia pseudomallei S13]
gi|169653825|gb|EDS86518.1| DNA topoisomerase III [Burkholderia pseudomallei S13]
Length = 906
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 227 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 257
>gi|134297379|ref|YP_001121114.1| DNA topoisomerase III [Burkholderia vietnamiensis G4]
gi|387903644|ref|YP_006333983.1| DNA topoisomerase III [Burkholderia sp. KJ006]
gi|134140536|gb|ABO56279.1| DNA topoisomerase III [Burkholderia vietnamiensis G4]
gi|387578536|gb|AFJ87252.1| DNA topoisomerase III [Burkholderia sp. KJ006]
Length = 865
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|456013664|gb|EMF47301.1| DNA topoisomerase III [Planococcus halocryophilus Or1]
Length = 719
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 24 SLISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
+ +S G QTPTL ER ++IR F+P+PY+
Sbjct: 183 AQLSTGRVQTPTLAMIAERENQIRNFQPKPYY 214
>gi|221201854|ref|ZP_03574891.1| DNA topoisomerase III [Burkholderia multivorans CGD2M]
gi|221207640|ref|ZP_03580648.1| DNA topoisomerase III subfamily [Burkholderia multivorans CGD2]
gi|221214664|ref|ZP_03587634.1| DNA topoisomerase III [Burkholderia multivorans CGD1]
gi|221165554|gb|EED98030.1| DNA topoisomerase III [Burkholderia multivorans CGD1]
gi|221172486|gb|EEE04925.1| DNA topoisomerase III subfamily [Burkholderia multivorans CGD2]
gi|221178274|gb|EEE10684.1| DNA topoisomerase III [Burkholderia multivorans CGD2M]
Length = 865
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
>gi|167585073|ref|ZP_02377461.1| DNA topoisomerase III [Burkholderia ubonensis Bu]
Length = 865
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 25 LISYGPCQTPTLGFCVERHDKIRTFKPEPYW 55
L + G QTPTL VER +KIR F P YW
Sbjct: 190 LTTVGRVQTPTLSIVVEREEKIRRFVPRDYW 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.142 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,261,215,059
Number of Sequences: 23463169
Number of extensions: 42449507
Number of successful extensions: 67650
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1913
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 65730
Number of HSP's gapped (non-prelim): 2111
length of query: 69
length of database: 8,064,228,071
effective HSP length: 41
effective length of query: 28
effective length of database: 7,102,238,142
effective search space: 198862667976
effective search space used: 198862667976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)