Your job contains 1 sequence.
>psy8719
MDRALIFCRTKLDCDNLERYLNSIDRRLIYYFT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8719
(33 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015075 - symbol:Ddx1 "Dead-box-1" species:7227 "D... 102 0.00013 2
UNIPROTKB|Q24731 - symbol:Ddx1 "ATP-dependent RNA helicas... 98 0.00024 1
UNIPROTKB|I3LGP0 - symbol:I3LGP0 "Uncharacterized protein... 98 0.00036 1
UNIPROTKB|F1SCS1 - symbol:F1SCS1 "Uncharacterized protein... 98 0.00051 1
UNIPROTKB|Q0IIK5 - symbol:DDX1 "ATP-dependent RNA helicas... 98 0.00055 1
UNIPROTKB|F6V659 - symbol:DDX1 "Uncharacterized protein" ... 98 0.00055 1
UNIPROTKB|Q92499 - symbol:DDX1 "ATP-dependent RNA helicas... 98 0.00055 1
UNIPROTKB|A2VD92 - symbol:ddx1 "ATP-dependent RNA helicas... 98 0.00055 1
UNIPROTKB|Q4R7L5 - symbol:DDX1 "ATP-dependent RNA helicas... 98 0.00055 1
UNIPROTKB|Q5NVJ8 - symbol:DDX1 "ATP-dependent RNA helicas... 98 0.00055 1
UNIPROTKB|Q5XH91 - symbol:ddx1 "ATP-dependent RNA helicas... 98 0.00055 1
MGI|MGI:2144727 - symbol:Ddx1 "DEAD (Asp-Glu-Ala-Asp) box... 98 0.00055 1
RGD|619903 - symbol:Ddx1 "DEAD (Asp-Glu-Ala-Asp) box heli... 98 0.00055 1
UNIPROTKB|E2QRW3 - symbol:DDX1 "Uncharacterized protein" ... 98 0.00059 1
UNIPROTKB|F1NV49 - symbol:DDX1 "ATP-dependent RNA helicas... 96 0.00090 1
UNIPROTKB|Q90WU3 - symbol:DDX1 "ATP-dependent RNA helicas... 96 0.00090 1
ZFIN|ZDB-GENE-041001-215 - symbol:ddx1 "DEAD (Asp-Glu-Ala... 96 0.00090 1
UNIPROTKB|F1NRD9 - symbol:DDX1 "ATP-dependent RNA helicas... 96 0.00091 1
>FB|FBgn0015075 [details] [associations]
symbol:Ddx1 "Dead-box-1" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006446 "regulation of translational initiation"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0001700 "embryonic development via the syncytial blastoderm"
evidence=IEP] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:AE014296 GO:GO:0001700 GO:GO:0003682 GO:GO:0042254
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0004518 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143 EMBL:AF057167
GeneTree:ENSGT00660000095174 GO:GO:0033677 CTD:1653 KO:K13177
OMA:TLNNVKQ EMBL:U34773 EMBL:AY119661 RefSeq:NP_524212.2
UniGene:Dm.2501 ProteinModelPortal:Q9VNV3 SMR:Q9VNV3 IntAct:Q9VNV3
STRING:Q9VNV3 PaxDb:Q9VNV3 PRIDE:Q9VNV3 EnsemblMetazoa:FBtr0078492
GeneID:40457 KEGG:dme:Dmel_CG9054 UCSC:CG9054-RA
FlyBase:FBgn0015075 InParanoid:Q9VNV3 OrthoDB:EOG43FFBW
PhylomeDB:Q9VNV3 GenomeRNAi:40457 NextBio:818872 Bgee:Q9VNV3
GermOnline:CG9054 Uniprot:Q9VNV3
Length = 727
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 MDRALIFCRTKLDCDNLERYL 21
MDRA+IFCRTK DCDNLER+L
Sbjct: 505 MDRAIIFCRTKQDCDNLERFL 525
Score = 24 (13.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 3/10 (30%), Positives = 7/10 (70%)
Query: 21 LNSIDRRLIY 30
+N D +++Y
Sbjct: 676 VNDFDGKVVY 685
>UNIPROTKB|Q24731 [details] [associations]
symbol:Ddx1 "ATP-dependent RNA helicase Ddx1" species:7244
"Drosophila virilis" [GO:0001700 "embryonic development via the
syncytial blastoderm" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003712 "transcription cofactor activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033677
"DNA/RNA helicase activity" evidence=ISS] [GO:0090305 "nucleic acid
phosphodiester bond hydrolysis" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0001700 GO:GO:0003682 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 PROSITE:PS51192 GO:GO:0004518 GO:GO:0008026
eggNOG:COG0513 GO:GO:0032508 GO:GO:0008143 GO:GO:0033677
OrthoDB:EOG43FFBW EMBL:U34779 ProteinModelPortal:Q24731
STRING:Q24731 FlyBase:FBgn0015207 InParanoid:Q24731 Uniprot:Q24731
Length = 400
Score = 98 (39.6 bits), Expect = 0.00024, P = 0.00024
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDRALIFCRTKLDCDNLERYLN 22
MDRA+IFCRTK DCDNLE++L+
Sbjct: 137 MDRAIIFCRTKQDCDNLEQHLS 158
>UNIPROTKB|I3LGP0 [details] [associations]
symbol:I3LGP0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00660000095174 EMBL:AEMK01181162
EMBL:CU896557 Ensembl:ENSSSCT00000026319 OMA:NREREWH Uniprot:I3LGP0
Length = 524
Score = 98 (39.6 bits), Expect = 0.00036, P = 0.00036
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 290 MDQAIIFCRTKIDCDNLEQY 309
>UNIPROTKB|F1SCS1 [details] [associations]
symbol:F1SCS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003877 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00622 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:TLNNVKQ
EMBL:CU469153 Ensembl:ENSSSCT00000009430 Uniprot:F1SCS1
Length = 689
Score = 98 (39.6 bits), Expect = 0.00051, P = 0.00051
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 502 MDQAIIFCRTKIDCDNLEQY 521
>UNIPROTKB|Q0IIK5 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0033677
"DNA/RNA helicase activity" evidence=ISS] [GO:0008143 "poly(A) RNA
binding" evidence=ISS] [GO:0071920 "cleavage body" evidence=ISS]
[GO:0072669 "tRNA-splicing ligase complex" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=ISS] [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003682 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0003725 GO:GO:0004527 GO:GO:0006302 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0072669
GO:GO:0004518 GO:GO:0010494 GO:GO:0008026 GO:GO:0043330
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0071920 GeneTree:ENSGT00660000095174
GO:GO:0033677 EMBL:BC122599 IPI:IPI00716534 RefSeq:NP_001068936.1
UniGene:Bt.1784 ProteinModelPortal:Q0IIK5 STRING:Q0IIK5
PRIDE:Q0IIK5 Ensembl:ENSBTAT00000013075 GeneID:510816
KEGG:bta:510816 CTD:1653 HOVERGEN:HBG005462 InParanoid:Q0IIK5
KO:K13177 OMA:TLNNVKQ OrthoDB:EOG46HG95 NextBio:20869630
ArrayExpress:Q0IIK5 Uniprot:Q0IIK5
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|F6V659 [details] [associations]
symbol:DDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003877 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00622 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 CTD:1653 KO:K13177
OMA:TLNNVKQ Ensembl:ENSCAFT00000005957 EMBL:AAEX03010740
EMBL:AAEX03010739 RefSeq:XP_848865.1 GeneID:475671 KEGG:cfa:475671
Uniprot:F6V659
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|Q92499 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0006446 "regulation of translational initiation"
evidence=NAS] [GO:0000245 "spliceosomal complex assembly"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0033677
"DNA/RNA helicase activity" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0004518 "nuclease activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008143 "poly(A) RNA binding"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IDA] [GO:0072669 "tRNA-splicing ligase complex"
evidence=IDA] [GO:0071920 "cleavage body" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0006446 GO:GO:0006351
GO:GO:0003682 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0003725 GO:GO:0004527 GO:GO:0006302 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0072669
GO:GO:0004518 GO:GO:0010494 GO:GO:0000245 GO:GO:0008026
GO:GO:0043330 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143 GO:GO:0071920
GO:GO:0033677 CTD:1653 HOVERGEN:HBG005462 KO:K13177 OMA:TLNNVKQ
OrthoDB:EOG46HG95 HOGENOM:HOG000251633 EMBL:X70649 EMBL:BC012132
EMBL:BC053673 IPI:IPI00293655 RefSeq:NP_004930.1 UniGene:Hs.440599
ProteinModelPortal:Q92499 SMR:Q92499 IntAct:Q92499
MINT:MINT-5005493 STRING:Q92499 PhosphoSite:Q92499 DMDM:6919862
REPRODUCTION-2DPAGE:IPI00293655 PaxDb:Q92499 PeptideAtlas:Q92499
PRIDE:Q92499 Ensembl:ENST00000233084 Ensembl:ENST00000381341
GeneID:1653 KEGG:hsa:1653 UCSC:uc002rce.3 GeneCards:GC02P015731
HGNC:HGNC:2734 HPA:CAB012280 HPA:HPA034502 HPA:HPA034503 MIM:601257
neXtProt:NX_Q92499 PharmGKB:PA27199 InParanoid:Q92499
PhylomeDB:Q92499 ChiTaRS:DDX1 GenomeRNAi:1653 NextBio:6806
ArrayExpress:Q92499 Bgee:Q92499 CleanEx:HS_DDX1
Genevestigator:Q92499 GermOnline:ENSG00000079785 Uniprot:Q92499
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|A2VD92 [details] [associations]
symbol:ddx1 "ATP-dependent RNA helicase DDX1" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033677
"DNA/RNA helicase activity" evidence=ISS] [GO:0072669
"tRNA-splicing ligase complex" evidence=ISS] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397
GO:GO:0006351 GO:GO:0003682 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0004527 GO:GO:0006302 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0072669 GO:GO:0004518
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0033677 CTD:1653 HOVERGEN:HBG005462 KO:K13177
EMBL:BC129617 RefSeq:NP_001091352.1 UniGene:Xl.75260
ProteinModelPortal:A2VD92 IntAct:A2VD92 PRIDE:A2VD92
GeneID:100037192 KEGG:xla:100037192 Xenbase:XB-GENE-969102
Uniprot:A2VD92
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTKLDCDN+E+Y
Sbjct: 506 MDQAIIFCRTKLDCDNMEQY 525
>UNIPROTKB|Q4R7L5 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9541
"Macaca fascicularis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0032508
"DNA duplex unwinding" evidence=ISS] [GO:0033677 "DNA/RNA helicase
activity" evidence=ISS] [GO:0071920 "cleavage body" evidence=ISS]
[GO:0072669 "tRNA-splicing ligase complex" evidence=ISS]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003682 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527
GO:GO:0006302 GO:GO:0003712 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0072669 GO:GO:0004518 GO:GO:0010494
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0071920 GO:GO:0033677 HOVERGEN:HBG005462
OrthoDB:EOG46HG95 HSSP:P10081 EMBL:AB168800
ProteinModelPortal:Q4R7L5 PRIDE:Q4R7L5 Uniprot:Q4R7L5
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|Q5NVJ8 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9601
"Pongo abelii" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0032508
"DNA duplex unwinding" evidence=ISS] [GO:0033677 "DNA/RNA helicase
activity" evidence=ISS] [GO:0071920 "cleavage body" evidence=ISS]
[GO:0072669 "tRNA-splicing ligase complex" evidence=ISS]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003682 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527
GO:GO:0006302 GO:GO:0003712 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0072669 GO:GO:0004518 GO:GO:0010494
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0071920 GO:GO:0033677 CTD:1653
HOVERGEN:HBG005462 KO:K13177 HSSP:P10081 EMBL:CR926030
RefSeq:NP_001127099.1 UniGene:Pab.18409 ProteinModelPortal:Q5NVJ8
GeneID:100174133 KEGG:pon:100174133 InParanoid:Q5NVJ8
Uniprot:Q5NVJ8
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|Q5XH91 [details] [associations]
symbol:ddx1 "ATP-dependent RNA helicase DDX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003712 "transcription cofactor activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] [GO:0008143 "poly(A) RNA binding"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033677 "DNA/RNA helicase activity" evidence=ISS] [GO:0072669
"tRNA-splicing ligase complex" evidence=ISS] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397
GO:GO:0006351 GO:GO:0003682 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0004527 GO:GO:0006302 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0072669 GO:GO:0004518
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032508 GO:GO:0008143 GeneTree:ENSGT00660000095174
GO:GO:0033677 CTD:1653 HOVERGEN:HBG005462 KO:K13177 OMA:TLNNVKQ
OrthoDB:EOG46HG95 HSSP:P10081 HOGENOM:HOG000251633 EMBL:CR855610
EMBL:BC084181 RefSeq:NP_001011133.1 UniGene:Str.3470
ProteinModelPortal:Q5XH91 STRING:Q5XH91 PRIDE:Q5XH91
Ensembl:ENSXETT00000038646 GeneID:496549 KEGG:xtr:496549
Xenbase:XB-GENE-969096 InParanoid:Q5XH91 Bgee:Q5XH91 Uniprot:Q5XH91
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTKLDCDN+E+Y
Sbjct: 506 MDQAIIFCRTKLDCDNMEQY 525
>MGI|MGI:2144727 [details] [associations]
symbol:Ddx1 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=ISO] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISO] [GO:0008143 "poly(A) RNA binding"
evidence=ISO] [GO:0009615 "response to virus" evidence=IMP]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0033677 "DNA/RNA helicase activity"
evidence=ISO] [GO:0043330 "response to exogenous dsRNA"
evidence=IMP] [GO:0071920 "cleavage body" evidence=ISO] [GO:0072669
"tRNA-splicing ligase complex" evidence=ISO] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2144727 GO:GO:0007275
GO:GO:0005524 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397
GO:GO:0006351 GO:GO:0003682 GO:GO:0009615 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0003725 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0072669 GO:GO:0004518 GO:GO:0010494 GO:GO:0008026
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032508 GO:GO:0008143 GO:GO:0071920
GeneTree:ENSGT00660000095174 GO:GO:0033677 CTD:1653
HOVERGEN:HBG005462 KO:K13177 OMA:TLNNVKQ OrthoDB:EOG46HG95
HOGENOM:HOG000251633 EMBL:AK028341 EMBL:AK153335 EMBL:AK160982
EMBL:BC010624 IPI:IPI00127172 RefSeq:NP_598801.1 UniGene:Mm.251255
ProteinModelPortal:Q91VR5 SMR:Q91VR5 IntAct:Q91VR5 STRING:Q91VR5
PhosphoSite:Q91VR5 REPRODUCTION-2DPAGE:Q91VR5 PaxDb:Q91VR5
PRIDE:Q91VR5 Ensembl:ENSMUST00000071103 GeneID:104721
KEGG:mmu:104721 UCSC:uc007nbh.1 InParanoid:Q91VR5 NextBio:357236
Bgee:Q91VR5 CleanEx:MM_DDX1 Genevestigator:Q91VR5
GermOnline:ENSMUSG00000037149 Uniprot:Q91VR5
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>RGD|619903 [details] [associations]
symbol:Ddx1 "DEAD (Asp-Glu-Ala-Asp) box helicase 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO;ISS] [GO:0003712
"transcription cofactor activity" evidence=ISO;ISS] [GO:0003725
"double-stranded RNA binding" evidence=IEA;ISO] [GO:0004518
"nuclease activity" evidence=ISO;ISS] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISO;ISS] [GO:0008143 "poly(A) RNA binding"
evidence=ISO;ISS] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0032508
"DNA duplex unwinding" evidence=ISO;ISS] [GO:0033677 "DNA/RNA
helicase activity" evidence=ISO;ISS] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA;ISO] [GO:0071920 "cleavage body"
evidence=ISO;ISS] [GO:0072669 "tRNA-splicing ligase complex"
evidence=ISO;ISS] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:619903 GO:GO:0007275
GO:GO:0005524 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397
GO:GO:0006351 GO:GO:0003682 GO:GO:0009615 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0003725 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0072669 GO:GO:0004518 GO:GO:0010494 GO:GO:0008026
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032508 GO:GO:0008143 GO:GO:0071920
GeneTree:ENSGT00660000095174 GO:GO:0033677 CTD:1653
HOVERGEN:HBG005462 KO:K13177 OMA:TLNNVKQ OrthoDB:EOG46HG95
HOGENOM:HOG000251633 EMBL:BC082049 IPI:IPI00555314
RefSeq:NP_445866.1 UniGene:Rn.65536 ProteinModelPortal:Q641Y8
IntAct:Q641Y8 STRING:Q641Y8 PRIDE:Q641Y8 Ensembl:ENSRNOT00000009100
GeneID:84474 KEGG:rno:84474 InParanoid:Q641Y8 NextBio:616970
ArrayExpress:Q641Y8 Genevestigator:Q641Y8
GermOnline:ENSRNOG00000006652 Uniprot:Q641Y8
Length = 740
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 506 MDQAIIFCRTKIDCDNLEQY 525
>UNIPROTKB|E2QRW3 [details] [associations]
symbol:DDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003877 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00622 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 Ensembl:ENSCAFT00000005957 Uniprot:E2QRW3
Length = 785
Score = 98 (39.6 bits), Expect = 0.00059, P = 0.00059
Identities = 16/20 (80%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDNLE+Y
Sbjct: 551 MDQAIIFCRTKIDCDNLEQY 570
>UNIPROTKB|F1NV49 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003877 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00622 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 IPI:IPI00585086
EMBL:AADN02018635 EMBL:AADN02018636 Ensembl:ENSGALT00000026560
ArrayExpress:F1NV49 Uniprot:F1NV49
Length = 740
Score = 96 (38.9 bits), Expect = 0.00090, P = 0.00090
Identities = 15/20 (75%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDN+E+Y
Sbjct: 506 MDQAIIFCRTKIDCDNMEQY 525
>UNIPROTKB|Q90WU3 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0003712 "transcription
cofactor activity" evidence=ISS] [GO:0006302 "double-strand break
repair" evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0033677
"DNA/RNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0072669 "tRNA-splicing ligase complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006397 GO:GO:0006351 GO:GO:0003682 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0004527 GO:GO:0006302 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0072669
GO:GO:0004518 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143 GO:GO:0033677 CTD:1653
HOVERGEN:HBG005462 KO:K13177 OrthoDB:EOG46HG95 EMBL:AY057383
IPI:IPI00585086 RefSeq:NP_989894.1 UniGene:Gga.14606 HSSP:P10081
ProteinModelPortal:Q90WU3 STRING:Q90WU3 PRIDE:Q90WU3 GeneID:395249
KEGG:gga:395249 HOGENOM:HOG000251633 NextBio:20815338
Uniprot:Q90WU3
Length = 740
Score = 96 (38.9 bits), Expect = 0.00090, P = 0.00090
Identities = 15/20 (75%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDN+E+Y
Sbjct: 506 MDQAIIFCRTKIDCDNMEQY 525
>ZFIN|ZDB-GENE-041001-215 [details] [associations]
symbol:ddx1 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-041001-215
GO:GO:0005524 GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
CTD:1653 KO:K13177 EMBL:BX649472 EMBL:BX005358 IPI:IPI00511501
RefSeq:NP_001184253.1 UniGene:Dr.19466 ProteinModelPortal:F1R2L8
Ensembl:ENSDART00000023963 GeneID:556790 KEGG:dre:556790
NextBio:20881663 ArrayExpress:F1R2L8 Bgee:F1R2L8 Uniprot:F1R2L8
Length = 740
Score = 96 (38.9 bits), Expect = 0.00090, P = 0.00090
Identities = 15/20 (75%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDN+E+Y
Sbjct: 506 MDQAIIFCRTKIDCDNMEQY 525
>UNIPROTKB|F1NRD9 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0071920 "cleavage
body" evidence=IEA] [GO:0072669 "tRNA-splicing ligase complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0032508
"DNA duplex unwinding" evidence=IEA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003877
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003682
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0003725 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0072669 GO:GO:0004518 GO:GO:0010494 GO:GO:0008026
GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0071920 GeneTree:ENSGT00660000095174
GO:GO:0033677 OMA:TLNNVKQ EMBL:AADN02018635 EMBL:AADN02018636
IPI:IPI00819903 ProteinModelPortal:F1NRD9
Ensembl:ENSGALT00000036885 ArrayExpress:F1NRD9 Uniprot:F1NRD9
Length = 742
Score = 96 (38.9 bits), Expect = 0.00091, P = 0.00091
Identities = 15/20 (75%), Positives = 20/20 (100%)
Query: 1 MDRALIFCRTKLDCDNLERY 20
MD+A+IFCRTK+DCDN+E+Y
Sbjct: 508 MDQAIIFCRTKIDCDNMEQY 527
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.337 0.149 0.473 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 33 33 0.00091 102 3 11 21 0.42 24
29 0.44 22
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 328 (35 KB)
Total size of DFA: 56 KB (2059 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 4.73u 0.16s 4.89t Elapsed: 00:00:01
Total cpu time: 4.73u 0.16s 4.89t Elapsed: 00:00:01
Start: Thu Aug 15 11:56:20 2013 End: Thu Aug 15 11:56:21 2013