BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8722
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|149898836|gb|ABR27886.1| Ras-related small GTPase [Triatoma infestans]
Length = 218
Score = 355 bits (911), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 195/221 (88%), Gaps = 3/221 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+ L S Y+FKVVLLGEGCVGKTSVVLRYVEDKFNEKH+TTLQA+FLNKKLNI G
Sbjct: 1 MADQLVNGGSGNYNFKVVLLGEGCVGKTSVVLRYVEDKFNEKHLTTLQATFLNKKLNIGG 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
KR+NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSF+KVKNWVKELKKMLG++I
Sbjct: 61 KRINLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFQKVKNWVKELKKMLGSEI 120
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CLTIAGNKIDL+K+R V E AE YA SVGAVHFHTSAK N GIEEMFLEL+QRM+++AQ
Sbjct: 121 CLTIAGNKIDLQKERNVPVETAENYAASVGAVHFHTSAKQNTGIEEMFLELTQRMMQRAQ 180
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLT 222
E ++ +ASEL+R SMRRN+V+V++E+ T+ +KS CC T
Sbjct: 181 EQEIQRASELTRTNSMRRNIVIVDEEE--TAPPSKS-CCGT 218
>gi|307203700|gb|EFN82666.1| Ras-related protein Rab-21 [Harpegnathos saltator]
Length = 243
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 182/207 (87%), Gaps = 3/207 (1%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y+FKVVLLGEGCVGKTSV LRYVEDKFN++HI+T+QASFLNKKLNI GKR+NLAIWDTAG
Sbjct: 12 YNFKVVLLGEGCVGKTSVALRYVEDKFNDRHISTVQASFLNKKLNINGKRVNLAIWDTAG 71
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE+FHALGPIYYRMSNGA+LVYDITDED+F+KVKNWVKELKKMLG++ICL IAGNK+DLE
Sbjct: 72 QEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLAIAGNKVDLE 131
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K R V E+AE+YA+ VGA+HFHTSAK+N+ IEEMFL+L++RM++ A E + + S L+R
Sbjct: 132 KDRNVAIEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMQHADEAE--QKSTLTR 189
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S RRNVVVVEDE + S T+S CC
Sbjct: 190 TNSTRRNVVVVEDE-IEQSQPTRSSCC 215
>gi|332022383|gb|EGI62695.1| Ras-related protein Rab-21 [Acromyrmex echinatior]
Length = 239
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/201 (76%), Positives = 178/201 (88%), Gaps = 2/201 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y+FKVVLLGEGCVGKTSV LRYVEDKFN+KHITTLQASFLNKKLNI GKR+NLAIWDTAG
Sbjct: 10 YNFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAG 69
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE+FHALGPIYYRMSNGA+LVYDITDED+F+KVKNWVKELKKMLG++ICL IAGNK+DLE
Sbjct: 70 QEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVDLE 129
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K R V E+AE+YA+ VGA+HFHTSAK+N+ IEEMFL+L+QRM+++A E + + S L+R
Sbjct: 130 KDRNVATEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQRADEAE--QKSTLTR 187
Query: 194 RGSMRRNVVVVEDEDLPTSSS 214
S RRNVV+VEDE T S
Sbjct: 188 TNSTRRNVVMVEDEAEQTQPS 208
>gi|403272140|ref|XP_003927941.1| PREDICTED: ras-related protein Rab-21 [Saimiri boliviensis
boliviensis]
Length = 338
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 180/211 (85%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 130 TYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 189
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 190 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 249
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 250 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 309
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 310 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 338
>gi|322778765|gb|EFZ09181.1| hypothetical protein SINV_03538 [Solenopsis invicta]
Length = 228
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/201 (76%), Positives = 177/201 (88%), Gaps = 2/201 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y+FKVVLLGEGCVGKTSV LRYVEDKFN+KHITTLQASFLNKKLNI GKR+NLAIWDTAG
Sbjct: 10 YNFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAG 69
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE+FHALGPIYYRMSNGA+LVYDITDED+F+KVKNWVKELKKMLG++ICL IAGNK+DLE
Sbjct: 70 QEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVDLE 129
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K R V E+AE+YA+ VGA+HFHTSAK+N+ IEEMFL+L+QRM++ A E + + S L+R
Sbjct: 130 KDRNVAIEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQHADEAE--QKSTLTR 187
Query: 194 RGSMRRNVVVVEDEDLPTSSS 214
S RRNVV+VEDE T S
Sbjct: 188 TNSTRRNVVMVEDEAEQTQPS 208
>gi|307190847|gb|EFN74693.1| Ras-related protein Rab-21 [Camponotus floridanus]
Length = 224
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 180/204 (88%), Gaps = 2/204 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
+ +Y+FKVVLLGEGCVGKTSV LRYVEDKFN+KHITTLQASFLNKKLNI GKR+NLAIWD
Sbjct: 8 TGSYNFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWD 67
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQE+FHALGPIYYRMSNGA+LVYDITDED+F+KVKNWVKELKKMLG++ICL IAGNK+
Sbjct: 68 TAGQEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKV 127
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLEK R V ++AE+YA+ VGA+HFHTSAK+N+ IEEMFL+L++RM+E+A E + + S
Sbjct: 128 DLEKDRNVAIDEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMERADEAE--QKST 185
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSS 214
L+R S RRNVV+VEDE T S
Sbjct: 186 LTRTNSTRRNVVMVEDESEHTQPS 209
>gi|440905226|gb|ELR55633.1| Ras-related protein Rab-21, partial [Bos grunniens mutus]
Length = 214
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 151/214 (70%), Positives = 180/214 (84%), Gaps = 2/214 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 3 AGRTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 62
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 122
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 123 VDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGN 182
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
S+ G+ RR V +++DE P + S GCC +G
Sbjct: 183 GSSQPGAARRGVQIIDDE--PQAQSVGGGCCSSG 214
>gi|432943838|ref|XP_004083295.1| PREDICTED: ras-related protein Rab-21-like [Oryzias latipes]
Length = 220
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 178/214 (83%), Gaps = 3/214 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 10 SNRTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIW 69
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGAVLVYD+TDEDSF+KVKNWVKEL+KMLGNDICL I GNK
Sbjct: 70 DTAGQERFHALGPIYYRDSNGAVLVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNK 129
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDL+K R V EDAE YA+SVGA H+HTSAK+N+GIEE+FL+L +RM+E A + AK +
Sbjct: 130 IDLDKDRHVSVEDAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAHAEERAKGN 189
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
S+ + RR V +V+DE T + GCC +G
Sbjct: 190 GASQSAATRRGVQIVDDEPQATPA---GGCCSSG 220
>gi|115496760|ref|NP_001068785.1| ras-related protein Rab-21 [Bos taurus]
gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|109658186|gb|AAI18089.1| RAB21, member RAS oncogene family [Bos taurus]
Length = 222
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 14 TYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 73
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK+DL
Sbjct: 74 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDL 133
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 134 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 193
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + S GCC +G
Sbjct: 194 QPGAARRGVQIIDDE--PQAQSVGGGCCSSG 222
>gi|326381131|ref|NP_001191951.1| ras-related protein Rab-21-like [Acyrthosiphon pisum]
Length = 226
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 175/210 (83%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
++ SFKVVLLGEGCVGKTS+VLRY EDKFN+KH++TLQASF+ KKLN+ G+R+NL+IWD
Sbjct: 15 TTAQSFKVVLLGEGCVGKTSLVLRYTEDKFNDKHVSTLQASFVKKKLNLNGRRINLSIWD 74
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYRMSNGA+LVYDITDEDSF+KVKNW+KELKKMLG++ICL IAGNKI
Sbjct: 75 TAGQERFHALGPIYYRMSNGAILVYDITDEDSFQKVKNWIKELKKMLGSEICLVIAGNKI 134
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLEK RTV EDAEKYA SVGAVHFHTSAKMN GIEE+FL L + M+EKA +
Sbjct: 135 DLEKDRTVSLEDAEKYASSVGAVHFHTSAKMNSGIEEIFLSLCRMMIEKADKQTADNLVT 194
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L+R GS RR V+++DED S + CC
Sbjct: 195 LNRSGSTRRRTVIIDDEDDVPSKESSRWCC 224
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/207 (72%), Positives = 179/207 (86%), Gaps = 2/207 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++S Y+FKVVLLGEGCVGKTSVVLRYVEDKFN+KHI+TLQASF KKLNI GKR+NLAIW
Sbjct: 5 NASAYNFKVVLLGEGCVGKTSVVLRYVEDKFNDKHISTLQASFFKKKLNINGKRVNLAIW 64
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE+FHALGPIYYRMSNGA+LVYDITDE++F+KVKNWVKELKKMLG+DICL IAGNK
Sbjct: 65 DTAGQEKFHALGPIYYRMSNGAILVYDITDEETFKKVKNWVKELKKMLGSDICLAIAGNK 124
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DLEK+R V E+AE+YA+ VGAVHFHTSAK N +EEMFL+L++RM++ A + + + S
Sbjct: 125 VDLEKERNVTIEEAEEYAKQVGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQQE--QKS 182
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTK 216
L+R S RRNVVVVEDE + TK
Sbjct: 183 TLTRNNSTRRNVVVVEDESAEQNQPTK 209
>gi|348521238|ref|XP_003448133.1| PREDICTED: ras-related protein Rab-21-like [Oreochromis niloticus]
Length = 216
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 178/215 (82%), Gaps = 3/215 (1%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAI
Sbjct: 5 NSGKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAI 64
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GN
Sbjct: 65 WDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGN 124
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
KIDL+K R V E+AE YA+SVGA H+HTSAK+N+GIEE+FL+L +RM+E AQ + K
Sbjct: 125 KIDLDKDRHVSVEEAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQAEERLKG 184
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ S+ S RR V +V+DE T + GCC +G
Sbjct: 185 NGASQSASSRRGVQIVDDEPQATPA---GGCCSSG 216
>gi|62858707|ref|NP_001016319.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266851|emb|CAJ82566.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624296|gb|AAI70902.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624300|gb|AAI70908.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 179/210 (85%), Gaps = 3/210 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWD
Sbjct: 13 SKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 72
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK+
Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKV 132
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 133 DLEKERHVSVQEAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQTDERAKGNG 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S+ G+ RR V +V+DE P + ST GCC
Sbjct: 193 PSQSGTSRRGVQIVDDE--PQAQST-GGCC 219
>gi|7661922|ref|NP_055814.1| ras-related protein Rab-21 [Homo sapiens]
gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|6002585|gb|AAF00048.1|AF091035_1 GTP-binding protein RAB21 [Homo sapiens]
gi|18255274|gb|AAH21901.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|62203472|gb|AAH92475.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|117646202|emb|CAL38568.1| hypothetical protein [synthetic construct]
gi|119617676|gb|EAW97270.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617677|gb|EAW97271.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|168279117|dbj|BAG11438.1| Ras-related protein Rab-21 [synthetic construct]
Length = 225
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 17 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 76
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 77 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 136
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 137 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 196
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 197 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 225
>gi|402886848|ref|XP_003906828.1| PREDICTED: ras-related protein Rab-21 [Papio anubis]
Length = 223
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 15 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 74
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 75 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 134
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 135 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 194
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 195 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 223
>gi|332220901|ref|XP_003259597.1| PREDICTED: ras-related protein Rab-21 [Nomascus leucogenys]
Length = 225
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 17 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 76
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 77 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 136
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 137 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 196
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 197 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 225
>gi|296212384|ref|XP_002752808.1| PREDICTED: ras-related protein Rab-21 [Callithrix jacchus]
Length = 225
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 17 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 76
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 77 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 136
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 137 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 196
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 197 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 225
>gi|114645863|ref|XP_522469.2| PREDICTED: ras-related protein Rab-21 [Pan troglodytes]
gi|397526055|ref|XP_003832955.1| PREDICTED: ras-related protein Rab-21 [Pan paniscus]
Length = 224
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 16 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 75
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 76 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 135
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 136 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 195
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 196 QPGTARRGVQIIDDE--PQAQTSGGGCCSSG 224
>gi|355564472|gb|EHH20972.1| Ras-related protein Rab-21 [Macaca mulatta]
Length = 223
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 179/210 (85%), Gaps = 2/210 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 75
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 76 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 135
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 136 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 195
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + ++ GCC +G
Sbjct: 196 PGTARRGVQIIDDE--PQAQTSGGGCCSSG 223
>gi|109097798|ref|XP_001117520.1| PREDICTED: ras-related protein Rab-21-like [Macaca mulatta]
Length = 223
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 179/210 (85%), Gaps = 2/210 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 75
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 76 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 135
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 136 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 195
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + ++ GCC +G
Sbjct: 196 PGTARRGVQIIDDE--PQAQTSGGGCCSSG 223
>gi|240849355|ref|NP_001155346.1| ras-related protein Rab-21 [Ovis aries]
gi|238566822|gb|ACR46637.1| RAB21 [Ovis aries]
Length = 222
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 178/210 (84%), Gaps = 2/210 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 74
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK+DLE
Sbjct: 75 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLE 134
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 135 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQMDERAKGNGSSQ 194
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + S GCC +G
Sbjct: 195 PGAARRGVQIIDDE--PQAQSVGGGCCSSG 222
>gi|148230174|ref|NP_001083402.1| RAB21, member RAS oncogene family [Xenopus laevis]
gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenopus laevis]
Length = 221
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 180/210 (85%), Gaps = 3/210 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWD
Sbjct: 13 SKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 72
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK+
Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKV 132
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLEK+R V ++AE+YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 133 DLEKERHVSIQEAEEYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNG 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ G+ RR V +V+DE P + ST GCC
Sbjct: 193 PTQSGTSRRGVQIVDDE--PQAQST-GGCC 219
>gi|47212281|emb|CAF89513.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/214 (70%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S TYSFK VLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 7 SGKTYSFKAVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIW 66
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYD+TDEDSF+KVKNWVKEL+KMLGNDICL I GNK
Sbjct: 67 DTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNK 126
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDL+K R V E+AE YA+SVGA H+HTSAK+N+GIEE+FL+L +RM+E AQ + K +
Sbjct: 127 IDLDKDRHVSVEEAESYAESVGARHYHTSAKLNKGIEELFLDLCKRMMETAQAEERVKGN 186
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
S+ S RR V +V+DE T + GCC +G
Sbjct: 187 GASQAASNRRGVQIVDDEPPATPA---GGCCSSG 217
>gi|297469971|ref|XP_001249324.2| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|297493177|ref|XP_002700179.1| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|296470701|tpg|DAA12816.1| TPA: ras-related protein Rab-21-like [Bos taurus]
Length = 272
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ TYSFKVVLLGEGCVGKTS+VL Y E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 61 AGRTYSFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 120
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK
Sbjct: 121 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 180
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 181 VDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGN 240
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
S+ G+ RR V +++DE P + S GCC +G
Sbjct: 241 GSSQPGAARRGVQIIDDE--PQAQSVGGGCCSSG 272
>gi|242023040|ref|XP_002431944.1| rab21, putative [Pediculus humanus corporis]
gi|212517295|gb|EEB19206.1| rab21, putative [Pediculus humanus corporis]
Length = 218
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 183/221 (82%), Gaps = 4/221 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M + ++ NSS TY+FKVVLLGEGCVGKTSVVLRYVEDKFN HITTLQASF+ KK+NIAG
Sbjct: 1 MTSFVEGNSSPTYNFKVVLLGEGCVGKTSVVLRYVEDKFNSDHITTLQASFVKKKINIAG 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K +NLAIWDTAGQE+FHALGPIYYRMSNGA+LVYDITDEDSF KVKNWVKELKKMLG DI
Sbjct: 61 KAVNLAIWDTAGQEKFHALGPIYYRMSNGAILVYDITDEDSFNKVKNWVKELKKMLGGDI 120
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CLTIAGNKIDLEK R V + AE+Y+ SVGA HF TSAK N I+E+FLEL+QRM+ +
Sbjct: 121 CLTIAGNKIDLEKDRNVPIDVAEEYSSSVGAKHFQTSAKHNLNIDELFLELTQRMISR-- 178
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLT 222
+D +A + S+ G+M++N+VVV+D+ + + K GCC T
Sbjct: 179 -YDQLEAIKSSKGGTMKKNIVVVDDDQIE-NDQKKQGCCGT 217
>gi|115495915|ref|NP_001070133.1| ras-related protein Rab-21 [Danio rerio]
gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio rerio]
gi|182891700|gb|AAI65035.1| Zgc:154045 protein [Danio rerio]
Length = 216
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 8 TYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTA 67
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYD+TDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 68 GQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 127
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V E+AE YA+SVGA H+HTSAK+N+GIEE+FL+L +RM+E AQ + ++ + S
Sbjct: 128 EKERHVSVEEAEGYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQLEERSRGNGAS 187
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ RR V +V+DE P ++ GCC +G
Sbjct: 188 NSSTGRRGVQIVDDE--PQAAVPAGGCCTSG 216
>gi|50510367|dbj|BAD32169.1| mKIAA0118 protein [Mus musculus]
Length = 253
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 177/211 (83%), Gaps = 3/211 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 46 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 105
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYD+TDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 106 GQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 165
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 166 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 225
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE SS GCC +G
Sbjct: 226 QAGAARRGVQIIDDEPQAQSS---GGCCSSG 253
>gi|33859751|ref|NP_077774.1| ras-related protein Rab-21 [Mus musculus]
gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras-related protein Rab-21; AltName: Full=Rab-12;
Flags: Precursor
gi|32822759|gb|AAH55042.1| RAB21, member RAS oncogene family [Mus musculus]
gi|112292999|dbj|BAF02877.1| Rab21 [Mus musculus]
gi|148689817|gb|EDL21764.1| RAB21, member RAS oncogene family [Mus musculus]
Length = 222
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 179/210 (85%), Gaps = 3/210 (1%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 75
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYD+TDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 76 QERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 135
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 136 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 195
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + S+ GCC +G
Sbjct: 196 AGAARRGVQIIDDE--PQAQSS-GGCCSSG 222
>gi|126339429|ref|XP_001370428.1| PREDICTED: ras-related protein Rab-21-like [Monodelphis domestica]
Length = 227
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 177/211 (83%), Gaps = 3/211 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 20 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 79
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 80 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 139
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 140 EKERHVSVQEAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 199
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
++G RR V +++DE SS GCC +G
Sbjct: 200 QQGMARRGVQIIDDEPQGQSS---GGCCSSG 227
>gi|241151857|ref|XP_002406775.1| RAS-related protein, putative [Ixodes scapularis]
gi|215493921|gb|EEC03562.1| RAS-related protein, putative [Ixodes scapularis]
Length = 215
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 176/212 (83%), Gaps = 5/212 (2%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S +YSFKVVLLGEGCVGKTS+VLRYV++KFN+KH +TLQASFL KKLNIAGKR++LAI
Sbjct: 7 SSGRSYSFKVVLLGEGCVGKTSLVLRYVQNKFNDKHFSTLQASFLEKKLNIAGKRVHLAI 66
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQE+FHALGPIYYR SNGA+LVYDITDEDSF+KVKNWV+EL+KMLG D+CLTI GN
Sbjct: 67 WDTAGQEKFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVRELRKMLGGDVCLTIVGN 126
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLEKQR V +AE YA SVGA H TSAK++RGIEE+FL+LS+RM+E A+ D
Sbjct: 127 KTDLEKQRAVPVAEAEAYAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVAEANDEQHR 186
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ L R GS RRNVV+V+DE P K GCC
Sbjct: 187 NSLGRGGSSRRNVVIVDDEPEP-----KRGCC 213
>gi|395541042|ref|XP_003772457.1| PREDICTED: ras-related protein Rab-21-like, partial [Sarcophilus
harrisii]
Length = 223
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 178/212 (83%), Gaps = 3/212 (1%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAI
Sbjct: 13 SSDGAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 72
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GN
Sbjct: 73 WDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGN 132
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
KIDLEK+R V ++AE Y++SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK
Sbjct: 133 KIDLEKERHVSVQEAEMYSESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKG 192
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S++G+ RR V +++DE SS GCC
Sbjct: 193 NGSSQQGAARRGVQIIDDEPQGQSS---GGCC 221
>gi|118082329|ref|XP_001233648.1| PREDICTED: ras-related protein Rab-21 [Gallus gallus]
Length = 220
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 178/211 (84%), Gaps = 3/211 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
++SFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 13 SFSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 72
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 73 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 132
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + A+ + S
Sbjct: 133 EKERHVSVQEAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSS 192
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE SS GCC +G
Sbjct: 193 QSGTARRGVQIIDDEPQVQSS---GGCCSSG 220
>gi|327272884|ref|XP_003221214.1| PREDICTED: ras-related protein Rab-21-like [Anolis carolinensis]
Length = 235
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 178/211 (84%), Gaps = 3/211 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
++SFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 28 SFSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 87
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 88 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 147
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
+K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + A+ + S
Sbjct: 148 DKERHVSIQEAETYAESVGARHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSS 207
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G+ RR V +++DE SS GCC +G
Sbjct: 208 QSGAARRGVQIIDDEPAVQSS---GGCCSSG 235
>gi|355786315|gb|EHH66498.1| Ras-related protein Rab-21, partial [Macaca fascicularis]
Length = 205
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/207 (71%), Positives = 176/207 (85%), Gaps = 2/207 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAGQER
Sbjct: 1 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 60
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
FHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R
Sbjct: 61 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 120
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+ G+
Sbjct: 121 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGT 180
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCCLTG 223
RR V +++DE P + ++ GCC +G
Sbjct: 181 ARRGVQIIDDE--PQAQTSGGGCCSSG 205
>gi|442759105|gb|JAA71711.1| Putative gtpase [Ixodes ricinus]
Length = 215
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 176/212 (83%), Gaps = 5/212 (2%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S ++SFKVVLLGEGCVGKTS+VLRYV++KFN+KH+TTLQASFL K LNIAGKR++LAI
Sbjct: 7 SSGRSFSFKVVLLGEGCVGKTSLVLRYVQNKFNDKHLTTLQASFLQKSLNIAGKRVHLAI 66
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQE+FHALGPIYYR SNGA+LVYDITDEDSF+KVK+WV+EL+KMLG D+CLTI GN
Sbjct: 67 WDTAGQEKFHALGPIYYRDSNGAILVYDITDEDSFQKVKSWVRELRKMLGGDVCLTIVGN 126
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLEKQR V +AE YA SVGA H TSAK++RGIEE+FL+LS+RM+E A+ D
Sbjct: 127 KTDLEKQRAVPVAEAEAYAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVAEANDEQHR 186
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ L R GS RRNVV+V+DE P K GCC
Sbjct: 187 NSLGRGGSSRRNVVIVDDEPEP-----KRGCC 213
>gi|405951631|gb|EKC19528.1| Ras-related protein Rab-21 [Crassostrea gigas]
Length = 208
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 180/219 (82%), Gaps = 11/219 (5%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S RN +SFK VLLGEGCVGKTS+VLRYVE+KFN+KHITTLQASFL KKLNI G
Sbjct: 1 MADSGGRN----FSFKCVLLGEGCVGKTSLVLRYVENKFNDKHITTLQASFLTKKLNIGG 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
KR+NL+IWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGNDI
Sbjct: 57 KRVNLSIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDI 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CL IAGNKIDLEK+R V DAE YA SVGA HFHTSAK+N+GIEEMFL+LS+ M+EKA
Sbjct: 117 CLCIAGNKIDLEKERHVSVADAEAYAASVGAKHFHTSAKLNKGIEEMFLDLSKGMIEKA- 175
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + +++ S R VVV D+D S+ K+GCC
Sbjct: 176 ----GQDNNRNQKDSTNRKSVVVVDDD--PSAQQKTGCC 208
>gi|224094073|ref|XP_002192267.1| PREDICTED: ras-related protein Rab-21 [Taeniopygia guttata]
Length = 220
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 177/211 (83%), Gaps = 3/211 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
++SFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 13 SFSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 72
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 73 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 132
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + A+ + S
Sbjct: 133 EKERHVSVQEAEMYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSS 192
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+ G RR V +++DE SS GCC +G
Sbjct: 193 QSGIARRGVQIIDDEPQVQSS---GGCCSSG 220
>gi|390360094|ref|XP_003729629.1| PREDICTED: ras-related protein Rab-21-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 173/212 (81%), Gaps = 8/212 (3%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S+ +FKVVLLGEGCVGKTS+VLRYVE+KFN+KHITTLQASFLNKKLNI GKR+NL I
Sbjct: 4 SSAGGKNFKVVLLGEGCVGKTSLVLRYVENKFNDKHITTLQASFLNKKLNIGGKRVNLDI 63
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF KVK+WVKELKKMLGNDI L IAGN
Sbjct: 64 WDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFTKVKSWVKELKKMLGNDISLCIAGN 123
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
KIDLEKQR V DAE YA SVGA HFHTSAK+N+GIEEMFL+LS+RMLE D A +
Sbjct: 124 KIDLEKQRNVSVADAEAYAASVGAKHFHTSAKLNKGIEEMFLDLSKRMLESTFLDDGASS 183
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S R S ++V +VED + P S GCC
Sbjct: 184 S----RASKHKSVTIVEDAEEPKS----GGCC 207
>gi|355714869|gb|AES05144.1| ras-related protein Rab-21 [Mustela putorius furo]
Length = 213
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/198 (73%), Positives = 171/198 (86%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 2 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK
Sbjct: 62 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 122 IDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGN 181
Query: 190 ELSRRGSMRRNVVVVEDE 207
S+ GS RR V +++DE
Sbjct: 182 GSSQPGSARRGVQIIDDE 199
>gi|281340633|gb|EFB16217.1| hypothetical protein PANDA_003669 [Ailuropoda melanoleuca]
Length = 221
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/194 (75%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 14 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 73
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 74 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 133
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 134 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 193
Query: 194 RGSMRRNVVVVEDE 207
GS RR V +++DE
Sbjct: 194 PGSARRGVQIIDDE 207
>gi|301759615|ref|XP_002915660.1| PREDICTED: ras-related protein Rab-21-like [Ailuropoda melanoleuca]
Length = 220
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/194 (75%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 13 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 72
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 73 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 132
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 133 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 192
Query: 194 RGSMRRNVVVVEDE 207
GS RR V +++DE
Sbjct: 193 PGSARRGVQIIDDE 206
>gi|359320530|ref|XP_003431485.2| PREDICTED: RAB21, member RAS oncogene family, partial [Canis lupus
familiaris]
Length = 214
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 171/198 (86%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIW
Sbjct: 3 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 62
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 122
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 123 IDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGN 182
Query: 190 ELSRRGSMRRNVVVVEDE 207
S+ G+ RR V +++DE
Sbjct: 183 GSSQPGAARRGVQIIDDE 200
>gi|431892057|gb|ELK02504.1| Ras-related protein Rab-21 [Pteropus alecto]
Length = 227
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/195 (74%), Positives = 170/195 (87%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 19 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 78
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 79 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 138
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 139 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 198
Query: 193 RRGSMRRNVVVVEDE 207
+ G+ RR V +++DE
Sbjct: 199 QPGAARRGVQIIDDE 213
>gi|410965116|ref|XP_003989098.1| PREDICTED: ras-related protein Rab-21 [Felis catus]
Length = 222
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 74
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 75 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 134
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 135 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 194
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 195 PGATRRGVQIIDDE 208
>gi|350584261|ref|XP_003481707.1| PREDICTED: ras-related protein Rab-21-like [Sus scrofa]
Length = 222
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 74
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 75 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 134
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 135 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 194
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 195 PGATRRGVQIIDDE 208
>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-related protein Rab-21; Flags: Precursor
Length = 223
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/195 (74%), Positives = 170/195 (87%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 15 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 74
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDL
Sbjct: 75 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 134
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 135 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 194
Query: 193 RRGSMRRNVVVVEDE 207
+ G+ RR V +++DE
Sbjct: 195 QPGAARRGVQIIDDE 209
>gi|291389571|ref|XP_002711381.1| PREDICTED: RAB21, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 221
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 14 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 73
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 74 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 133
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 134 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 193
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 194 PGAARRGVQIIDDE 207
>gi|291234199|ref|XP_002737035.1| PREDICTED: RAB21, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 216
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 176/211 (83%), Gaps = 5/211 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ +++FKVVLLGEG VGKTSVVLRYVE+KFNEKHI+TLQASFL KKLNI GKR+NLAIW
Sbjct: 8 SAKSFNFKVVLLGEGAVGKTSVVLRYVENKFNEKHISTLQASFLTKKLNIGGKRVNLAIW 67
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGNDI L IAGNK
Sbjct: 68 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDIALCIAGNK 127
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDLEK+R V DAE YA SVGA HFHT+AK+N+GIEEMFL+LS+RM+E+ E D K++
Sbjct: 128 IDLEKERHVPVADAESYAASVGAKHFHTTAKLNKGIEEMFLDLSKRMIERQSE-DTHKST 186
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + + V +V+DE P S GCC
Sbjct: 187 TTSRS-NRTKTVTIVDDE--PEQPSG-GGCC 213
>gi|344266375|ref|XP_003405256.1| PREDICTED: ras-related protein Rab-21-like [Loxodonta africana]
Length = 222
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 74
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 75 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 134
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
++R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 135 RERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 194
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 195 PGTTRRGVQIIDDE 208
>gi|51948448|ref|NP_001004238.1| ras-related protein Rab-21 [Rattus norvegicus]
gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|50927400|gb|AAH79323.1| RAB21, member RAS oncogene family [Rattus norvegicus]
gi|149066960|gb|EDM16693.1| RAB21, member RAS oncogene family [Rattus norvegicus]
Length = 223
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 75
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYD+TDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 76 QERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 135
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 136 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 195
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 196 AGAARRGVQIIDDE 209
>gi|417397373|gb|JAA45720.1| Putative gtpase [Desmodus rotundus]
Length = 221
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAG
Sbjct: 14 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 73
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 74 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 133
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 134 KERHVSIQEAELYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 193
Query: 194 RGSMRRNVVVVEDE 207
G+ RR V +++DE
Sbjct: 194 PGAARRGVQIIDDE 207
>gi|198418761|ref|XP_002119635.1| PREDICTED: similar to Ras-related protein Rab-21 [Ciona
intestinalis]
Length = 218
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 178/216 (82%), Gaps = 7/216 (3%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S T FKVVLLGEGCVGKTS+VLRY EDKFN+KHITTLQASFLNKKLNI GKR+NL+IWD
Sbjct: 3 SRTRQFKVVLLGEGCVGKTSLVLRYCEDKFNDKHITTLQASFLNKKLNIGGKRVNLSIWD 62
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLG DICL IAGNKI
Sbjct: 63 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGQDICLCIAGNKI 122
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK--- 187
DLEK R V ++AE+YA SVGA H HTSAK+N+GI+++FL LS++M++ + E + K
Sbjct: 123 DLEKSRHVSVQEAEEYAASVGAKHVHTSAKLNKGIDDVFLTLSKKMMQVSDEQEAQKSST 182
Query: 188 ---ASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ + RG+ RR VVV+ +E+ +S KSGCC
Sbjct: 183 GGSSTSVPGRGNSRRGVVVISNEE-AAASEQKSGCC 217
>gi|196015793|ref|XP_002117752.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
gi|190579637|gb|EDV19728.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
Length = 209
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 175/212 (82%), Gaps = 8/212 (3%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
++S T FKVVLLGEGCVGKTS+VLRY E+KFNEKH++TLQAS+L KKLNI GKR+NLAI
Sbjct: 3 STSKTSKFKVVLLGEGCVGKTSIVLRYCENKFNEKHLSTLQASYLEKKLNIGGKRINLAI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITDEDSF KVK WVKEL+KMLGN+ICL I GN
Sbjct: 63 WDTAGQERFHALGPIYYRESHGAILVYDITDEDSFMKVKKWVKELRKMLGNEICLCIVGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
KIDLEK RTV AE YAQSVGAVHFHTSAKMN+GIEE+FL L++RML AQ+ + A
Sbjct: 123 KIDLEKDRTVHVTRAEDYAQSVGAVHFHTSAKMNKGIEEVFLNLTKRMLA-AQDDNTNTA 181
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++G R++VV+++DE L S SGCC
Sbjct: 182 ---GKQGGSRKSVVIIDDEPLQQS----SGCC 206
>gi|156366329|ref|XP_001627091.1| predicted protein [Nematostella vectensis]
gi|156213990|gb|EDO34991.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 3/214 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FKVVLLGEGCVGKTS++LRYV+DKFN+KH+TTLQASFLNK+LNI G+R+NLAIW
Sbjct: 4 ASRQNQFKVVLLGEGCVGKTSLMLRYVQDKFNDKHLTTLQASFLNKRLNINGQRVNLAIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF KVKNWV+ELKKMLG+DICL IAGNK
Sbjct: 64 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFLKVKNWVRELKKMLGDDICLCIAGNK 123
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
IDLEK R V DAE YA++VGA HFHTSAK+N+GIEEMF EL++RM+++ ++ +
Sbjct: 124 IDLEKDRHVEASDAEAYAKTVGAKHFHTSAKLNKGIEEMFFELTKRMVDQQEKATTKTNT 183
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
RG+ RR VV+ DE S KSG C G
Sbjct: 184 NSLERGTSRRKNVVIVDEQ---PSKQKSGGCCGG 214
>gi|449266530|gb|EMC77577.1| Ras-related protein Rab-21, partial [Columba livia]
Length = 201
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 3/204 (1%)
Query: 20 LLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHA 79
LLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAGQERFHA
Sbjct: 1 LLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHA 60
Query: 80 LGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVM 139
LGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V
Sbjct: 61 LGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVS 120
Query: 140 QEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRR 199
++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + A+ + S+ G+ RR
Sbjct: 121 VQEAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSSQSGTARR 180
Query: 200 NVVVVEDEDLPTSSSTKSGCCLTG 223
V +++DE SS GCC +G
Sbjct: 181 GVQIIDDEPQVQSS---GGCCSSG 201
>gi|383858269|ref|XP_003704624.1| PREDICTED: ras-related protein Rab-21-like [Megachile rotundata]
Length = 222
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S+ ++ + Y+FKVVLLGEGCVGKTSV LRYVE KFN+KHI+TLQASFLNKKL + G
Sbjct: 1 MASSVS-STGNGYNFKVVLLGEGCVGKTSVALRYVEGKFNDKHISTLQASFLNKKLTVDG 59
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K++NLAIWDTAGQE+FHALGPIYYRMSNGA+LVYDITDED+F+KVKNWVKELKKMLG++I
Sbjct: 60 KKVNLAIWDTAGQEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEI 119
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CL IAGNKIDLEK R+V ++AE+YA+ VGA+H+HTSAK+++ IEEMF++L+QRM++ A
Sbjct: 120 CLAIAGNKIDLEKNRSVSIQEAEEYAKQVGAMHYHTSAKLSQNIEEMFVDLTQRMIQHAD 179
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
E + + S L+R S RRNVVVVE ++ TKS CC
Sbjct: 180 EAE--QKSTLTRTNSTRRNVVVVE-DEAEERQYTKSSCC 215
>gi|443716621|gb|ELU08055.1| hypothetical protein CAPTEDRAFT_163376 [Capitella teleta]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 175/215 (81%), Gaps = 8/215 (3%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
SS ++FKVVLLGEG VGKTS++LR+VE+KFN+KH+TTLQASFLNKK+NI GKR+NLAIW
Sbjct: 3 SSGGHTFKVVLLGEGAVGKTSLLLRFVENKFNDKHLTTLQASFLNKKMNIGGKRVNLAIW 62
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGAVLVYDITDEDSF KVKNWVKEL+KMLGN+I L I GNK
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAVLVYDITDEDSFLKVKNWVKELRKMLGNEISLCIVGNK 122
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA--- 186
+DLE R + +DAE YA SVGA H+HTSAK+N+GIEEMFL+LS+ MLE++ A
Sbjct: 123 VDLENDRHISVQDAESYAASVGARHYHTSAKLNKGIEEMFLDLSKSMLEQSNTHSAASGG 182
Query: 187 KASELSRRGSMRRNVV-VVEDEDLPTSSSTKSGCC 220
++ SR GS RR VV +V+D+D P + GCC
Sbjct: 183 SSAPGSRGGSTRRQVVTIVDDDDRP----ERRGCC 213
>gi|91078236|ref|XP_966494.1| PREDICTED: similar to Ras-related small GTPase isoform 1 [Tribolium
castaneum]
gi|270003941|gb|EFA00389.1| hypothetical protein TcasGA2_TC003235 [Tribolium castaneum]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/199 (72%), Positives = 170/199 (85%), Gaps = 4/199 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MAN+ S ++++FKVVLLGEGCVGKTS+VLRYVEDKFN H+TT+QASFLNKKLNI G
Sbjct: 1 MANN---TSGASHNFKVVLLGEGCVGKTSLVLRYVEDKFNTNHVTTVQASFLNKKLNIDG 57
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
KR+NLAIWDTAGQE+FHALGPIYYR SNGAVLVYDITDEDSF+KVK+WVKEL+KMLG DI
Sbjct: 58 KRINLAIWDTAGQEKFHALGPIYYRSSNGAVLVYDITDEDSFQKVKSWVKELRKMLGADI 117
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CL IAGNK DLEK R V E+AE YA VGA+HF TSAK+N+G+EEMFL L+Q+MLE +
Sbjct: 118 CLVIAGNKTDLEKNRNVSLEEAEAYAIKVGAIHFQTSAKLNKGVEEMFLVLTQKMLETVE 177
Query: 182 EFDLAKASELSRRGSMRRN 200
E + A+ + LSR+ S RRN
Sbjct: 178 EKE-AQNAPLSRQNSQRRN 195
>gi|449677953|ref|XP_002167019.2| PREDICTED: ras-related protein Rab-21-like [Hydra magnipapillata]
Length = 217
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 179/214 (83%), Gaps = 16/214 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+FKVVLLGEGCVGKTS++LRY +DKFN+KH+TTLQA+FLN++LNI KR+NL+IWDTAGQ
Sbjct: 9 NFKVVLLGEGCVGKTSILLRYCQDKFNDKHLTTLQAAFLNRRLNIDSKRINLSIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR S GA+LVYDITDEDSF+KVKNWVKEL+KMLG +ICL IAGNKID+EK
Sbjct: 69 ERFHALGPIYYRDSQGAILVYDITDEDSFQKVKNWVKELRKMLGEEICLCIAGNKIDMEK 128
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA--QEFDL------A 186
+R V+ +AE+YA+SVGA H+HTSAK+NRGIEEMFL+L++ M+EK +E ++ A
Sbjct: 129 ERHVLVSEAEEYAKSVGAKHYHTSAKLNRGIEEMFLDLTKSMVEKQTLEEAEIESNPNSA 188
Query: 187 KASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
KA ELS R ++NVV++E+E KSGCC
Sbjct: 189 KAKELSLR---KKNVVIIEEE-----PQKKSGCC 214
>gi|296488008|tpg|DAA30121.1| TPA: ras-related protein Rab-21 [Bos taurus]
Length = 196
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 162/183 (88%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
TYSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTA
Sbjct: 14 TYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 73
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK+DL
Sbjct: 74 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDL 133
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S
Sbjct: 134 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSS 193
Query: 193 RRG 195
+ G
Sbjct: 194 QPG 196
>gi|297692451|ref|XP_002823570.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-21 [Pongo
abelii]
Length = 345
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQA FL + L + GK + + DTAG
Sbjct: 138 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQAIFLPQPLELGGKNICCFLXDTAG 197
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 198 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 257
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 258 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 317
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + ++ GCC +G
Sbjct: 318 PGTARRGVQIIDDE--PQAQTSGGGCCSSG 345
>gi|357612151|gb|EHJ67842.1| Ras-related small GTPase [Danaus plexippus]
Length = 208
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 172/210 (81%), Gaps = 12/210 (5%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S T++FKVVLLGEGCVGKTS++LRY+EDK+N+KH+TTLQA+FLNKKLNI GKR+NL+IWD
Sbjct: 6 SGTHNFKVVLLGEGCVGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRINLSIWD 65
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQE+FHALGPIYYR SNGA+LVYDITDEDSF KVKNWVKEL+KMLG+DI L IAGNKI
Sbjct: 66 TAGQEKFHALGPIYYRNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVIAGNKI 125
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLE+ RTV E+AE YA VGA HF+TSAKMN+G+EE+FLEL++ M E+ ++ A S
Sbjct: 126 DLEQDRTVPLEEAESYAVMVGARHFNTSAKMNQGVEELFLELTREMTERFEQNSQADVSR 185
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR V+VVEDE + +S CC
Sbjct: 186 TSR-------VLVVEDE-----APQQSSCC 203
>gi|427784931|gb|JAA57917.1| Putative ras-related protein rab-21 [Rhipicephalus pulchellus]
Length = 214
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 175/211 (82%), Gaps = 5/211 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S +Y+FKVVLLGEGCVGKTS+VLRYVE+KFN+KH++TLQAS+L+K+LNIAG+R+ LAIW
Sbjct: 7 SGRSYAFKVVLLGEGCVGKTSLVLRYVENKFNDKHLSTLQASYLDKRLNIAGERVQLAIW 66
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE+FHALGPIYYR SNGAVLVYDITDE SF KV+NWVKEL+KMLG D+CLTIAGNK
Sbjct: 67 DTAGQEKFHALGPIYYRDSNGAVLVYDITDEGSFIKVQNWVKELRKMLGTDVCLTIAGNK 126
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DL+KQR V +AE YA SVGA HFHTSAK+NRGI+++FL+LS+RM++ A D +
Sbjct: 127 VDLDKQRNVSAAEAEAYAASVGATHFHTSAKLNRGIDDLFLDLSKRMMQVANTNDEQHRN 186
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L R G+ RR VV+V+D + K+ CC
Sbjct: 187 SLGRGGNSRRTVVIVDDNPVQ-----KTSCC 212
>gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
gi|73535742|pdb|1YZT|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
Length = 184
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/174 (78%), Positives = 155/174 (89%)
Query: 5 SLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL 64
SL S YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+
Sbjct: 10 SLVPRGSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRV 69
Query: 65 NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLT 124
NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL
Sbjct: 70 NLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLC 129
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E
Sbjct: 130 IVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 183
>gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535744|pdb|1YZU|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535774|pdb|1Z0I|A Chain A, Gdp-Bound Rab21 Gtpase
gi|146387038|pdb|2OT3|B Chain B, Crystal Structure Of Rabex-5 Vps9 Domain In Complex With
Nucleotide Free Rab21
Length = 170
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/168 (80%), Positives = 153/168 (91%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWD
Sbjct: 2 SRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKI
Sbjct: 62 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKI 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E
Sbjct: 122 DLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 169
>gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535748|pdb|1Z08|B Chain B, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535749|pdb|1Z08|C Chain C, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535750|pdb|1Z08|D Chain D, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
Length = 170
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/168 (79%), Positives = 152/168 (90%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTL ASFL KKLNI GKR+NLAIWD
Sbjct: 2 SRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKI
Sbjct: 62 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKI 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E
Sbjct: 122 DLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 169
>gi|320166151|gb|EFW43050.1| Rab21 [Capsaspora owczarzaki ATCC 30864]
Length = 202
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 168/212 (79%), Gaps = 17/212 (8%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+ +FK+VLLGEGCVGKTS+VLRY E++F +KHI+TLQASFL K+LNI GKR+NL IWDTA
Sbjct: 4 SLTFKIVLLGEGCVGKTSLVLRYCENRFVDKHISTLQASFLTKRLNIGGKRVNLNIWDTA 63
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKELKKMLGNDI L IAGNK DL
Sbjct: 64 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELKKMLGNDIALVIAGNKSDL 123
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
EK RTV E AE+YA SVGA HF+TSAK+++GIEE+FL+LS+RM+ +E
Sbjct: 124 EKHRTVSAEAAEQYAASVGARHFYTSAKLSKGIEELFLDLSKRMI-----------TEAD 172
Query: 193 RRGSM----RRNVVVVEDEDLPTSSSTKSGCC 220
+RG R+ +VV+D+ P + S GCC
Sbjct: 173 KRGGTSTVGRKTAIVVDDDVAPKAQS--GGCC 202
>gi|66548006|ref|XP_393353.2| PREDICTED: ras-related protein Rab-21 [Apis mellifera]
Length = 222
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 176/219 (80%), Gaps = 4/219 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S+ N+++ Y+FKVVLLGEGCVGKTSV LRYVE+KFN++HI+TLQASFLNKKL I
Sbjct: 1 MASSIS-NTNNVYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHE 59
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K++NLAIWDTAGQE+FHALGPIYYRMSNGA++VYD+TD D+F +V NWV EL+KMLG+ I
Sbjct: 60 KKVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGI 119
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CL IAGNKIDLEK R V E+AE++A GA+HFH SAK+N IEEMF +L+ RM+E A
Sbjct: 120 CLAIAGNKIDLEKDRRVYIEEAEEFANKAGAMHFHISAKLNENIEEMFFQLTVRMIEHAD 179
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + S LSR S+RRNVVVVEDE S KS CC
Sbjct: 180 LME--QKSTLSRTSSIRRNVVVVEDEG-EESEPIKSSCC 215
>gi|326911580|ref|XP_003202136.1| PREDICTED: ras-related protein Rab-21-like, partial [Meleagris
gallopavo]
Length = 189
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 159/192 (82%), Gaps = 3/192 (1%)
Query: 32 VLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGA 91
VLRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA
Sbjct: 1 VLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGA 60
Query: 92 VLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVG 151
+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVG
Sbjct: 61 ILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESVG 120
Query: 152 AVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPT 211
A H+HTSAK N+GIEE+FL+L +RM+E AQ + A+ + S+ G+ RR V +++DE
Sbjct: 121 AKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSSQSGTARRGVQIIDDEPQVQ 180
Query: 212 SSSTKSGCCLTG 223
SS GCC +G
Sbjct: 181 SS---GGCCSSG 189
>gi|340716929|ref|XP_003396943.1| PREDICTED: ras-related protein Rab-21-like [Bombus terrestris]
gi|350426815|ref|XP_003494550.1| PREDICTED: ras-related protein Rab-21-like [Bombus impatiens]
Length = 225
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/220 (64%), Positives = 176/220 (80%), Gaps = 4/220 (1%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
+MA + ++ + Y+FKVVLLGEGCVGKTSV LRYVE+KFN++HI+TLQASFLNKKL +
Sbjct: 3 IMATPIS-STGNGYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTVH 61
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
GK++NLAIWDTAGQE+FHALGPIYYRMSNGA++VYD+TD D+F++V NWV EL+KMLG+
Sbjct: 62 GKKVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFQRVINWVTELRKMLGSG 121
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
ICL IAGNKIDLEK R V E+AE++A GA+HFH SAK++ IEEMF +L+ RM+E A
Sbjct: 122 ICLAIAGNKIDLEKDRRVCTEEAEEFANKTGAMHFHISAKLSENIEEMFFQLTLRMIEHA 181
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + S L+R S RRNVVVVEDE + TKS CC
Sbjct: 182 DLME--QKSTLTRTSSTRRNVVVVEDEAE-ETEPTKSSCC 218
>gi|380016771|ref|XP_003692346.1| PREDICTED: ras-related protein Rab-21-like [Apis florea]
Length = 222
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 176/219 (80%), Gaps = 4/219 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S+ ++++ Y+FKVVLLGEGCVGKTSV LRYVE+KFN++HI+TLQASFLNKKL I
Sbjct: 1 MASSIS-STNNVYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHE 59
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K++NLAIWDTAGQE+FHALGPIYYRMSNGA++VYD+TD D+F +V NWV EL+KMLG+ I
Sbjct: 60 KKVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGI 119
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
CL IAGNKIDLEK R V E+AE++A GA+HFH SAK+N IEEMF +L+ RM+E A
Sbjct: 120 CLAIAGNKIDLEKDRRVYIEEAEEFANKAGAMHFHISAKLNENIEEMFFQLTVRMIEHAD 179
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + S LSR S+RRNVVVVEDE + KS CC
Sbjct: 180 LME--QKSTLSRTSSIRRNVVVVEDEG-EETEPIKSSCC 215
>gi|326432232|gb|EGD77802.1| rab family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 197
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 165/205 (80%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGEGCVGKTS+VLRY + FNE H++TLQASFL KK+N+ +R+ LAIWDTAGQE
Sbjct: 5 FKIVLLGEGCVGKTSIVLRYCQQTFNENHVSTLQASFLKKKINLNQQRVELAIWDTAGQE 64
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+FHALGPIYYR S+GAVLVYDITD+DSF+KVKNWV+ELKKMLG++I LTI GNK DLE+Q
Sbjct: 65 KFHALGPIYYRNSHGAVLVYDITDQDSFQKVKNWVRELKKMLGSNIALTICGNKSDLERQ 124
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
RTV Q +AE YA SVGA HF TSA++NRGI+EMFL+L++R++++ AKA + R
Sbjct: 125 RTVDQAEAEAYAASVGAKHFQTSARLNRGIDEMFLDLAKRLVQQG-----AKAPKAQSRV 179
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S V+VED+D+ S K GCC
Sbjct: 180 S-----VLVEDDDVQPDS--KGGCC 197
>gi|354474122|ref|XP_003499280.1| PREDICTED: ras-related protein Rab-21-like [Cricetulus griseus]
Length = 289
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/185 (69%), Positives = 153/185 (82%), Gaps = 2/185 (1%)
Query: 25 CVGKTSV--VLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGP 82
C+G+ LRY E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAGQERFHALGP
Sbjct: 91 CIGENQAHRXLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGP 150
Query: 83 IYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQED 142
IYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++
Sbjct: 151 IYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQE 210
Query: 143 AEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVV 202
AE YA SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+ G RR V
Sbjct: 211 AESYADSVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGASQAGPARRGVQ 270
Query: 203 VVEDE 207
+++DE
Sbjct: 271 IIDDE 275
>gi|225710862|gb|ACO11277.1| Ras-related protein Rab-21 [Caligus rogercresseyi]
Length = 217
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M ANS R S Y+FKVVLLGEGCVGKTS VLRYV+D+FN++HITTLQASFLNK+LN+
Sbjct: 1 MPANSASR-SDVNYNFKVVLLGEGCVGKTSCVLRYVDDQFNDRHITTLQASFLNKRLNVR 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
GKR+NL+IWDTAGQERFHALGPIYYR +NGA+LVYDI+D DSF KVK W+KEL+KMLGN
Sbjct: 60 GKRVNLSIWDTAGQERFHALGPIYYRDANGAILVYDISDLDSFRKVKVWIKELRKMLGNK 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I L IAGNKIDLE R V AE+YA+SVGA HFHTSAK N GI+E+FLEL+++M+ A
Sbjct: 120 IVLLIAGNKIDLEDSRQVETGTAEEYAKSVGATHFHTSAKDNTGIDELFLELTRQMISSA 179
>gi|335772958|gb|AEH58231.1| Ras-related protein Rab-21-like protein [Equus caballus]
Length = 186
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 148/171 (86%)
Query: 37 EDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYD 96
E+KFN+KHITTLQASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYD
Sbjct: 2 ENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYD 61
Query: 97 ITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFH 156
ITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVGA H+H
Sbjct: 62 ITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYH 121
Query: 157 TSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDE 207
TSAK N+GIEE+FL+L +RM+E AQ + AK + S+ G+ RR V +++DE
Sbjct: 122 TSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDE 172
>gi|289741547|gb|ADD19521.1| GTPase Rab21 [Glossina morsitans morsitans]
Length = 225
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 166/220 (75%), Gaps = 10/220 (4%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLA 67
NS++ Y+FKVVLLGEGCVGKTS+VLRYVEDKFN +HI+TLQASFL KK+N+ G ++ L
Sbjct: 7 NSTTQYNFKVVLLGEGCVGKTSIVLRYVEDKFNPQHISTLQASFLTKKINLDNGAKVQLN 66
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
IWDTAGQERFHALGPIYYR S+GA+LVYDITDEDSF+KVKNWVKELK+MLG+DI LTIAG
Sbjct: 67 IWDTAGQERFHALGPIYYRGSHGAILVYDITDEDSFQKVKNWVKELKRMLGSDIVLTIAG 126
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
NK DLE +RTV EDA YA SVGA +F TSAK N IE++F EL++ M+E Q+ +
Sbjct: 127 NKTDLENERTVPFEDALDYADSVGAYYFETSAKANENIEKLFTELTEFMIEHVQQ-SNQQ 185
Query: 188 ASELSRRGSMRRNVVVVEDE-------DLPTSSSTKSGCC 220
+ G + ++VED P + +T+S CC
Sbjct: 186 NQRSALNGQFGQRRLIVEDSLDGSDDAGAPVNGTTRS-CC 224
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGEGCVGKTS+VLRYVEDKF+EKH +T+QASFL KK+N+ G+R+ LAIWDTAGQE
Sbjct: 14 FKIVLLGEGCVGKTSLVLRYVEDKFHEKHFSTIQASFLTKKINLEGQRVTLAIWDTAGQE 73
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFHALGPIYYR S+ A+LVYDITD+DSF KV+NWVKEL+++LG+ + L I GNKIDL+K+
Sbjct: 74 RFHALGPIYYRDSHAAILVYDITDQDSFVKVQNWVKELRRILGDKVVLAIVGNKIDLDKE 133
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A +Y++SVGA H+ TSAK NRGIEE+FL+L+Q++L A+ + +S ++
Sbjct: 134 RNVPAEEALEYSKSVGATHYQTSAKTNRGIEELFLDLTQQLLRMAESQNELNSS-INLTS 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ VV+V+D P K CC
Sbjct: 193 NRNPEVVIVDDSLAP-----KKSCC 212
>gi|30580479|sp|Q8WQ53.1|RAB21_GEOCY RecName: Full=Ras-related protein Rab-21
gi|18073931|emb|CAC85935.1| Ras-realted small GTPase [Geodia cydonium]
Length = 229
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 165/229 (72%), Gaps = 11/229 (4%)
Query: 2 MANSLD--RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
MA+ D R +T KVVLLGEG VGKTS+VLRY E+KFN+KH TLQASF+ K+LNI
Sbjct: 1 MASPSDASRRRQATVKAKVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNI 60
Query: 60 AGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
GKR+ LAIWDTAGQER+HALGPIYYR S GA++VYDITDEDSF K +NW+KELK+MLG+
Sbjct: 61 GGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGD 120
Query: 120 DICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ L I GNKIDL++QRTV ++DA +YA+SVGA H++TSAK ++G+ E+FL+L++R+LE
Sbjct: 121 KVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELFLDLAKRILEA 180
Query: 180 AQEFDL--------AKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
A +S + R ++V +D + P S GCC
Sbjct: 181 NPPSSSTPPESQRGAPSSHPPSQPRQRSTLIVTDDSEQP-SPKQGGGCC 228
>gi|14318622|gb|AAH09109.1| KIAA0118 protein, partial [Homo sapiens]
Length = 175
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
Query: 47 TLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKV 106
TLQASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KV
Sbjct: 1 TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKV 60
Query: 107 KNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
KNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N+GIE
Sbjct: 61 KNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 120
Query: 167 EMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
E+FL+L +RM+E AQ + AK + S+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 121 ELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDE--PQAQTSGGGCCSSG 175
>gi|330798937|ref|XP_003287505.1| Rab GTPase [Dictyostelium purpureum]
gi|325082451|gb|EGC35932.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 152/206 (73%), Gaps = 4/206 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
SFKVVLLGEGCVGKTS+VLRY+++ FN+KH+ T A F K +NI GKR+ L IWDTAGQ
Sbjct: 7 SFKVVLLGEGCVGKTSIVLRYIQNTFNDKHLMTQHAGFFQKNININGKRVCLTIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR S GA++VYDITD DSF K KNW+KELK MLGNDI L I GNK DLEK
Sbjct: 67 ERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEK 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R + +AE YA+SVGA+H+ TSAK+N+GIE++FL+L++RML + +S ++
Sbjct: 127 TRVITLAEAEAYAKSVGAIHYSTSAKLNKGIEDLFLDLTRRMLSNVSTSTIPSSSNTAQT 186
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + +V D + PT TK CC
Sbjct: 187 TNRSERIPIVPDNE-PT---TKPVCC 208
>gi|89258431|gb|ABD65439.1| Rab21 [Suberites domuncula]
Length = 222
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
Query: 5 SLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL 64
++ R ST KVVLLGEG VGKTS+VLRYVE+KFN+KH +TLQASFL K LNI +R+
Sbjct: 3 AVHRPRPSTVKAKVVLLGEGAVGKTSIVLRYVENKFNDKHESTLQASFLQKTLNIGPRRI 62
Query: 65 NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLT 124
LAIWDTAGQERFHALGPIYYR + GAV+VYDITD DSF K KNW+KEL++++G++I +
Sbjct: 63 QLAIWDTAGQERFHALGPIYYRDAQGAVVVYDITDVDSFTKAKNWIKELRRIVGDNIAVC 122
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE-KAQEF 183
I GNKIDLEK RTV +AE YA SVGA HF+TSAK N+G++E+FL+LS+ +LE K+
Sbjct: 123 IVGNKIDLEKHRTVSHREAEDYASSVGATHFNTSAKQNKGVQELFLDLSKNILESKSMPH 182
Query: 184 DLAKASELSRRGSMRRNVVVVED 206
+ S RR+++V ED
Sbjct: 183 PSDSGQPFAAPQSGRRSIIVEED 205
>gi|426226572|ref|XP_004007415.1| PREDICTED: ras-related protein Rab-21-like [Ovis aries]
Length = 196
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 144/175 (82%), Gaps = 2/175 (1%)
Query: 49 QASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKN 108
+ASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKN
Sbjct: 24 KASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN 83
Query: 109 WVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEM 168
WVKEL+KMLGN+ICL I GNK+DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+
Sbjct: 84 WVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEEL 143
Query: 169 FLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
FL+L +RM+E AQ + AK + S+ G+ RR V +++DE P + S GCC +G
Sbjct: 144 FLDLCKRMIETAQMDERAKGNGSSQPGAARRGVQIIDDE--PQAQSVGGGCCSSG 196
>gi|66807765|ref|XP_637605.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208512|sp|P34142.2|RAB21_DICDI RecName: Full=Ras-related protein Rab-21; AltName: Full=Ras-related
protein RabB
gi|60465965|gb|EAL64032.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 212
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 152/207 (73%), Gaps = 4/207 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
SFKVVLLGEGCVGKTS+V RY+++ FN+KH+ T A F K +NI GKR+ L IWDTAGQ
Sbjct: 7 SFKVVLLGEGCVGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR S GA++VYDITD DSF K KNW+KELK MLGNDI L I GNK DLEK
Sbjct: 67 ERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEK 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R + DAE YA+SVGA+H+ TSAK+N+GIEE+FL+L++RM+ + + + + +
Sbjct: 127 TRVIPLADAEAYAKSVGAIHYSTSAKLNKGIEELFLDLTRRMILNSSGVVIHSNTNTTGQ 186
Query: 195 GSMR-RNVVVVEDEDLPTSSSTKSGCC 220
+ R + +V D D S + + GCC
Sbjct: 187 TTNRSERIPIVPDSD---SGNKQPGCC 210
>gi|304604|gb|AAC37383.1| RabB [Dictyostelium discoideum]
gi|739977|prf||2004272D rabB gene
Length = 213
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 153/207 (73%), Gaps = 3/207 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
SFKVVLLGEGCVGKTS+V RY+++ FN+KH+ T A F K +NI GKR+ L IWDTAGQ
Sbjct: 7 SFKVVLLGEGCVGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR S GA++VYDITD DSF K KNW+KELK MLGNDI L I GNK DLEK
Sbjct: 67 ERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEK 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R + DAE YA+SVGA+H+ TSAK+N+GIEE+FL+L++RM+ + + + + +
Sbjct: 127 TRVIPLADAEAYAKSVGAIHYSTSAKLNKGIEELFLDLTRRMILNSSGVVIHSNTNTTGQ 186
Query: 195 GSMR-RNVVVVEDEDLPTSSSTKSGCC 220
+ R + +V D D + ++ + GCC
Sbjct: 187 TTNRSERIPIVPDSD--SGNNKQPGCC 211
>gi|395852974|ref|XP_003798999.1| PREDICTED: ras-related protein Rab-21 [Otolemur garnettii]
Length = 265
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 155/237 (65%), Gaps = 43/237 (18%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL--------- 64
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQ + L
Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQVRAPGAGGGASESLLLRAVGTWWP 74
Query: 65 NLAIW----------------------------------DTAGQERFHALGPIYYRMSNG 90
IW DTAGQERFHALGPIYYR SNG
Sbjct: 75 GPGIWTAALRPVTSAFGSPFQIHPGDSPGRGSLSPQGQADTAGQERFHALGPIYYRDSNG 134
Query: 91 AVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSV 150
A+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SV
Sbjct: 135 AILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSTQEAESYAESV 194
Query: 151 GAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDE 207
GA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S G+ RR V +++DE
Sbjct: 195 GAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSPPGTARRGVQIIDDE 251
>gi|328872078|gb|EGG20448.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 153/216 (70%), Gaps = 11/216 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S + SFKVVLLGEGCVGKTS+VLRY+++ F +KH+ T A F K +NIAGKR+ L IW
Sbjct: 2 SEAEKSFKVVLLGEGCVGKTSIVLRYIQNTFVDKHVMTQHAGFFQKNINIAGKRVGLTIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR S GA++VYDITD DS+ K KNW+KELK MLGNDI L + GNK
Sbjct: 62 DTAGQERFHALGPIYYRGSQGAIVVYDITDADSYTKAKNWIKELKAMLGNDIVLCLIGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DLEK R + E++E YA SVGA H+ TSAK+N+G+EE+FL+L++RML K+ S
Sbjct: 122 CDLEKSRVITLEESEAYAASVGAKHYGTSAKLNKGVEELFLDLTKRMLTKSTAIPTISGS 181
Query: 190 ELSRRGSMRRN-----VVVVEDEDLPTSSSTKSGCC 220
S +G+ N +V E+E+ S CC
Sbjct: 182 --SNQGATTSNRQDRIPIVPENEN----SQEGKTCC 211
>gi|345320574|ref|XP_001517415.2| PREDICTED: ras-related protein Rab-21-like [Ornithorhynchus
anatinus]
Length = 184
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 145/176 (82%), Gaps = 3/176 (1%)
Query: 48 LQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVK 107
+QASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVK
Sbjct: 12 VQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVK 71
Query: 108 NWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEE 167
NWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE
Sbjct: 72 NWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAEAYAESVGAKHYHTSAKHNKGIEE 131
Query: 168 MFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+FL+L +RM+E AQ + AK + + G+ RR V +++DE P S++ GCC +G
Sbjct: 132 LFLDLCKRMIETAQVDERAKGNGSGQPGTARRGVQIIDDE--PQVQSSR-GCCSSG 184
>gi|340376053|ref|XP_003386548.1| PREDICTED: ras-related protein Rab-21-like [Amphimedon
queenslandica]
Length = 222
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 139/163 (85%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLGEGCVGKTS+VLRYV+++FN+KHI TLQASFL K L I +RL L IWDTAGQER
Sbjct: 14 KVVLLGEGCVGKTSIVLRYVQNQFNDKHIQTLQASFLQKNLTINRRRLCLNIWDTAGQER 73
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+HALGPIYYR S+ A++VYDITDEDSF K KNWV+EL+KMLG+ L I GNK DLEK +
Sbjct: 74 YHALGPIYYRDSHAAIVVYDITDEDSFTKAKNWVRELRKMLGDSCVLVIVGNKSDLEKNK 133
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ ++DA++YA SVGA HF+TSAK N+GIEEMFL+LS+R+LEK
Sbjct: 134 VIQEKDAQEYAASVGAKHFYTSAKQNKGIEEMFLDLSKRLLEK 176
>gi|428182225|gb|EKX51086.1| hypothetical protein GUITHDRAFT_85102 [Guillardia theta CCMP2712]
Length = 215
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 156/204 (76%), Gaps = 3/204 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
++K+VLLGEG VGKTS+VLRYV + F++K TT+QASFL+K++NI NLAIWDTAGQ
Sbjct: 9 NYKIVLLGEGRVGKTSLVLRYVNNTFSDKQQTTIQASFLSKRINIGENTCNLAIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR ++GA+LVYD TD +SF KVKNWVKEL+KM+G +I L IAGNKIDL+K
Sbjct: 69 ERFHALGPIYYRDADGALLVYDTTDTESFAKVKNWVKELRKMVGQEIVLCIAGNKIDLDK 128
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
+R V + +AE+YA SVGA HF TSAK+ +GIEE FL L+++M+E+ QE D + + +RR
Sbjct: 129 ERQVEKSEAEEYAASVGAYHFQTSAKLGKGIEETFLALAKKMIEQRQEND---SRQSARR 185
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSG 218
++VV D+ S SG
Sbjct: 186 SGGNAPILVVADDTSNGGSGAASG 209
>gi|348580399|ref|XP_003475966.1| PREDICTED: ras-related protein Rab-21-like [Cavia porcellus]
Length = 199
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/165 (70%), Positives = 139/165 (84%), Gaps = 2/165 (1%)
Query: 45 ITTLQ--ASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDS 102
+ TLQ ASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDS
Sbjct: 21 VGTLQGVASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDS 80
Query: 103 FEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMN 162
F+KVKNWVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N
Sbjct: 81 FQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQN 140
Query: 163 RGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDE 207
+GIEE+FL+L +RM+E AQ + AK + S+ G+ RR V +++DE
Sbjct: 141 KGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDE 185
>gi|149743106|ref|XP_001490458.1| PREDICTED: ras-related protein Rab-21-like [Equus caballus]
Length = 181
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/159 (71%), Positives = 136/159 (85%)
Query: 49 QASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKN 108
+ASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKN
Sbjct: 9 RASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN 68
Query: 109 WVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEM 168
WVKEL+KMLGN+ICL I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+
Sbjct: 69 WVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEEL 128
Query: 169 FLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDE 207
FL+L +RM+E AQ + AK + S+ G+ RR V +++DE
Sbjct: 129 FLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDE 167
>gi|402594577|gb|EJW88503.1| Rab21 protein [Wuchereria bancrofti]
Length = 223
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+SS ++FK+VLLGEG VGKTS++LRYVE+KF+ +H++TLQASFL+KKL++ G+ + L IW
Sbjct: 11 NSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQAVVLNIW 70
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEK--VKNWVKELKKMLGNDICLTIAG 127
DTAGQE+FHALGPIYYR S+GA+L+YD+TD +SFEK VK WVKELK+MLG+D+ L I G
Sbjct: 71 DTAGQEKFHALGPIYYRDSHGALLIYDVTDTNSFEKAPVKMWVKELKRMLGDDVYLVIIG 130
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ--EFDL 185
NK+DLE+ R V ++A YA+S+GA HF TSAK N G+ ++F L + ++E+AQ +F
Sbjct: 131 NKVDLERNRNVDTDEAIGYAKSIGAEHFETSAKDNIGVTQVFDYLVKGLVERAQHSKFQG 190
Query: 186 AKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCL 221
+ S G+ RRN +++ D+ P K CC
Sbjct: 191 TAVTSSSHYGASRRNDLLIIDDPPP----VKKSCCF 222
>gi|194768593|ref|XP_001966396.1| GF22152 [Drosophila ananassae]
gi|190617160|gb|EDV32684.1| GF22152 [Drosophila ananassae]
Length = 225
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 141/171 (82%), Gaps = 1/171 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAI 68
S T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+ +K+N+ G++ L I
Sbjct: 9 SGPTLNFKAVLLGEGCVGKTSLVLRYMEDRFNSQHLSTLQASFVTRKVNLEDGRKAQLNI 68
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+EL++M G DI L I GN
Sbjct: 69 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELRQMRGTDIALIIVGN 128
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
K DLE+QR VM ++A +YA++VGA + TSAK N G+ E+F L+Q MLE+
Sbjct: 129 KTDLEEQRAVMHQEAMQYARTVGAQYVETSAKENEGVTELFELLTQLMLEQ 179
>gi|348685093|gb|EGZ24908.1| hypothetical protein PHYSODRAFT_350023 [Phytophthora sojae]
Length = 282
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 146/169 (86%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
ST FKVVLLGEG VGKTS++LRY++ +++E+ ++TLQAS+L+K+L + +R+ L++WDT
Sbjct: 5 STKKFKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD +SF KV+ WV+EL++++G+DI + IAGNK D
Sbjct: 65 AGQERFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
L + R V +++A +YA+SVGA HF TSAK+NRG+E++F+EL++RMLE+A
Sbjct: 125 LHRNRKVPEDEARRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLERA 173
>gi|391331399|ref|XP_003740134.1| PREDICTED: ras-related protein Rab-21-like [Metaseiulus
occidentalis]
Length = 211
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 151/209 (72%), Gaps = 11/209 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+KVVLLGEG VGKTS++LRYV DKFN++ T+ AS+L K + + KR++LAIWDTAGQE
Sbjct: 7 YKVVLLGEGRVGKTSLILRYVHDKFNDRLDRTVNASYLTKTVALGMKRVDLAIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
FHALGP+YYR S GA+LVYDITDEDSF KVKNWVKELKKMLGN++ L + GNK DLE +
Sbjct: 67 MFHALGPLYYRDSQGAILVYDITDEDSFRKVKNWVKELKKMLGNEVVLVVIGNKSDLESE 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R+V +AE YA+SVGA HF TSAK+NRGI E+FL L + M+ K +A + +RR
Sbjct: 127 RSVPLHEAESYAKSVGAAHFLTSAKLNRGITEVFLHLCKEMIMK-------RARDGARRQ 179
Query: 196 SM----RRNVVVVEDEDLPTSSSTKSGCC 220
S +RN + VE D + + CC
Sbjct: 180 STGAGAQRNRLQVETSDDNAEPTRTNKCC 208
>gi|195355659|ref|XP_002044308.1| GM10050 [Drosophila sechellia]
gi|194129619|gb|EDW51662.1| GM10050 [Drosophila sechellia]
Length = 224
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++ RN T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+++K+++
Sbjct: 1 MSSRRTRNGP-TLNFKAVLLGEGCVGKTSLVLRYMEDRFNSQHLSTLQASFVSRKVSLED 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 60 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
I L I GNK DLE+QR V Q+DA +YA++VGA + TSAK N G+ E+F L+Q MLE+
Sbjct: 120 IALIIVGNKTDLEQQRAVTQDDALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQ 178
>gi|576556|dbj|BAA07682.1| KIAA0118 [Homo sapiens]
Length = 161
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 135/163 (82%), Gaps = 2/163 (1%)
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+
Sbjct: 1 GKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNE 60
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
ICL I GNKIDLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E A
Sbjct: 61 ICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETA 120
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
Q + AK + S+ G+ RR V +++DE P + ++ GCC +G
Sbjct: 121 QVDERAKGNGSSQPGTARRGVQIIDDE--PQAQTSGGGCCSSG 161
>gi|324512193|gb|ADY45056.1| Ras-related protein Rab-21 [Ascaris suum]
Length = 239
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 159/219 (72%), Gaps = 4/219 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M + +++++++FKVVLLGEG VGK+S++LRYVE+KFN +HI+T+QASFL KK+ + G
Sbjct: 23 MEAAASTSANTSFTFKVVLLGEGAVGKSSLMLRYVENKFNPRHISTIQASFLCKKIVVDG 82
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ L IWDTAGQE+FHALGPIYYR S+GA+L+YDITD SFEKVK+WVKEL+++LG +
Sbjct: 83 NAVILNIWDTAGQEKFHALGPIYYRDSHGALLIYDITDLHSFEKVKSWVKELRRILGESV 142
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
L I GNK DLE+ R V ++ A +YA+SVGA H TSAK N GI E F L++ M+E+A+
Sbjct: 143 VLLIVGNKTDLERNRNVERQTALEYAKSVGADHCETSAKNNVGINEAFELLTKAMIERAK 202
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ LA R RRN +++ D D PTS CC
Sbjct: 203 KTQLASTDGACGRAPSRRNNLLIVD-DPPTSDKK---CC 237
>gi|198471676|ref|XP_002133801.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
gi|198146025|gb|EDY72428.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
Length = 224
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAI 68
S T +FK VLLGEGCVGKTS+VLRY+EDKFN +H++TLQASF+ KK+ + +R L I
Sbjct: 8 SGPTLNFKAVLLGEGCVGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+M G +I L I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
K DLE+QR + EDA +YAQ+VGA + SAK N G+ E+F L+Q MLE+
Sbjct: 128 KTDLEEQRAIGYEDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLMLER 178
>gi|195164155|ref|XP_002022914.1| GL16463 [Drosophila persimilis]
gi|194104976|gb|EDW27019.1| GL16463 [Drosophila persimilis]
Length = 223
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAI 68
S T +FK VLLGEGCVGKTS+VLRY+EDKFN +H++TLQASF+ KK+ + +R L I
Sbjct: 8 SGPTLNFKAVLLGEGCVGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+M G +I L I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
K DLE+QR + EDA +YAQ+VGA + SAK N G+ E+F L+Q MLE+
Sbjct: 128 KTDLEEQRAIGYEDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLMLER 178
>gi|221500833|ref|NP_001036321.2| Rab21, isoform C [Drosophila melanogaster]
gi|442617211|ref|NP_001259785.1| Rab21, isoform D [Drosophila melanogaster]
gi|220901851|gb|EAA46055.3| Rab21, isoform C [Drosophila melanogaster]
gi|440217029|gb|AGB95623.1| Rab21, isoform D [Drosophila melanogaster]
Length = 222
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 160/222 (72%), Gaps = 5/222 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++S RN T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+++K+++
Sbjct: 1 MSSSRTRNGP-TLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLED 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 60 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I L I GNK DLE+QR V ++A +YA++VGA + TSAK N G+ E+F L+Q MLE+
Sbjct: 120 IALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQL 179
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTS--SSTKSGCC 220
+ AS L + N+ +D + P + + CC
Sbjct: 180 SQRQ-PDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 220
>gi|21429138|gb|AAM50288.1| RE42508p [Drosophila melanogaster]
gi|220948536|gb|ACL86811.1| Rab21-PA [synthetic construct]
gi|220957812|gb|ACL91449.1| Rab21-PA [synthetic construct]
Length = 222
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 160/222 (72%), Gaps = 5/222 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++S RN T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+++K+++
Sbjct: 1 MSSSRARNGP-TLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLED 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 60 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I L I GNK DLE+QR V ++A +YA++VGA + TSAK N G+ E+F L+Q MLE+
Sbjct: 120 IALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQL 179
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTS--SSTKSGCC 220
+ AS L + N+ +D + P + + CC
Sbjct: 180 SQRQ-PDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 220
>gi|223634478|gb|ACN09816.1| GH27649p [Drosophila melanogaster]
Length = 263
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 160/222 (72%), Gaps = 5/222 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++S RN T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+++K+++
Sbjct: 42 MSSSRTRNGP-TLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLED 100
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 101 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 160
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I L I GNK DLE+QR V ++A +YA++VGA + TSAK N G+ E+F L+Q MLE+
Sbjct: 161 IALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQL 220
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTS--SSTKSGCC 220
+ AS L + N+ +D + P + + CC
Sbjct: 221 SQRQ-PDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 261
>gi|301090951|ref|XP_002895671.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097098|gb|EEY55150.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 145/168 (86%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
ST FKVVLLGEG VGKTS++LRY++ +++E+ ++TLQAS+L+K+L + +R+ L++WDT
Sbjct: 5 STKKFKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD +SF KV+ WV+EL++++G+DI + IAGNK D
Sbjct: 65 AGQERFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
L + R V +++A++YA+SVGA HF TSAK+NRG+E++F+EL++RML +
Sbjct: 125 LHRNRKVPEDEAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLNR 172
>gi|195432330|ref|XP_002064176.1| GK20025 [Drosophila willistoni]
gi|194160261|gb|EDW75162.1| GK20025 [Drosophila willistoni]
Length = 230
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAI 68
S +FK VLLGEGCVGKTS+VLRY+EDKFN +H++TLQASF+ KK+ + +R L I
Sbjct: 8 SGPILNFKAVLLGEGCVGKTSLVLRYMEDKFNSQHLSTLQASFVTKKITLPDERRAQLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+MLG+DI L I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMLGSDITLIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
K DLE QR + E A +YA++VGA + TSAK N G+ E+F L+Q ML++ Q+
Sbjct: 128 KTDLEDQRAIDYESAVQYARTVGAQYVETSAKENEGVTELFELLTQLMLDQRQQ 181
>gi|195482441|ref|XP_002102048.1| GE15254 [Drosophila yakuba]
gi|194189572|gb|EDX03156.1| GE15254 [Drosophila yakuba]
Length = 222
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%), Gaps = 5/222 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++S RN T +FK VLLGEGCVGKTS+VLRY+ED+FN +H++TLQASF+ +KL++
Sbjct: 1 MSSSRTRNGP-TLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVTRKLSLED 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 60 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I L I GNK DLE+QR+V ++A YA++VGA + TSAK N G+ E+F L+ MLE+
Sbjct: 120 IALIIVGNKTDLEEQRSVTHDEALPYARTVGAQYVETSAKENEGVAELFDLLTHLMLEQL 179
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTS--SSTKSGCC 220
+ AS L + S ED + P + + CC
Sbjct: 180 SQRQ-PDASPLRLQTSDTDTFNNSEDSEAPDPGDPAGQRSCC 220
>gi|325192953|emb|CCA27337.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 308
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 139/164 (84%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGEG VGKTS++LRY++ ++ ++ ++TLQAS+L+K+L + R+ L+IWDTAGQE
Sbjct: 12 FKIVLLGEGRVGKTSILLRYIKGEYTDQQVSTLQASYLDKRLMVDNTRVQLSIWDTAGQE 71
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFHALGPIYYR ++GAVLVYDITDE+SF KV+ WVKEL++++G++I + IAGNK DL +
Sbjct: 72 RFHALGPIYYRDADGAVLVYDITDEESFRKVRTWVKELRRIVGDEIDILIAGNKSDLHRN 131
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E+A YA SVGA HF TSAK+NRG+EE+F++LS+RML +
Sbjct: 132 RKVNEEEANNYAASVGATHFSTSAKLNRGLEEVFVDLSRRMLRR 175
>gi|195131053|ref|XP_002009965.1| GI14949 [Drosophila mojavensis]
gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mojavensis]
Length = 222
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAI 68
+ T +FK VLLGEGCVGKTS+VLRY+EDKFN +H++TLQASF+ KK+ + +R L I
Sbjct: 8 AGPTLNFKAVLLGEGCVGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDERRAQLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+M G++I L I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLE+QR + E A +YAQ+VGA + TSAK N G+ E+F L+Q M+
Sbjct: 128 KTDLEEQRAISYETALRYAQTVGAQYVETSAKENDGVNELFELLTQLMVAHHGSKQQNDT 187
Query: 189 SELSRRGSMRRNVVVVE-DEDLPTSSSTKSGCC 220
+ L + S+ V + DE++P ++ CC
Sbjct: 188 NALRLQNSISEAGVEPDLDENVPAVAAAHRSCC 220
>gi|426373484|ref|XP_004053632.1| PREDICTED: ras-related protein Rab-21 [Gorilla gorilla gorilla]
Length = 324
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 155/210 (73%), Gaps = 10/210 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTLQ+S L KK+NI R+ + W G
Sbjct: 125 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQSSLL-KKINIGSFRMKIQFW---G 180
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
++RF LG + + G VL+ D+ + +VKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 181 EDRFIFLGVVIVVIPTGFVLICDLL----YIQVKNWVKELRKMLGNEICLCIVGNKIDLE 236
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + S+
Sbjct: 237 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQ 296
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
G+ RR V +++DE P + ++ GCC +G
Sbjct: 297 PGTARRGVQIIDDE--PQAQTSGGGCCSSG 324
>gi|312082931|ref|XP_003143650.1| hypothetical protein LOAG_08070 [Loa loa]
gi|307761187|gb|EFO20421.1| hypothetical protein LOAG_08070 [Loa loa]
Length = 219
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 152/204 (74%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+FK+VLLGEG VGKTS++LRY+E++FN +H++TLQASFL KKL++ G+ + L IWDTAGQ
Sbjct: 16 NFKIVLLGEGAVGKTSLMLRYIENRFNPQHVSTLQASFLCKKLHVDGQTVELNIWDTAGQ 75
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E+FHALGPIYYR S+GA+L+YDITD SFEKVK WVKELK+MLG+D+ L I GNK+DLE+
Sbjct: 76 EKFHALGPIYYRDSHGALLIYDITDTHSFEKVKMWVKELKRMLGDDVYLMIIGNKLDLER 135
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +A YA+ +GA HF TSAK N G+ ++F L + ++E+ + L + +S
Sbjct: 136 NRNVDINEAIGYAKLIGAKHFETSAKDNIGVTQVFDYLVKGLVERTRHSQLWNTNVVSHY 195
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSG 218
+ RRN +++ D+ P S SG
Sbjct: 196 SASRRNDLLIIDDPPPVKKSCCSG 219
>gi|194897947|ref|XP_001978753.1| GG17497 [Drosophila erecta]
gi|190650402|gb|EDV47680.1| GG17497 [Drosophila erecta]
Length = 222
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 143/179 (79%), Gaps = 2/179 (1%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
M++S R S T +FK VLLGEGCVGKTS+VLRY+ED+FN +H+TTLQASF+ +K+++
Sbjct: 1 MSSSRTR-SGPTLNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLTTLQASFVTRKVSLED 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
G+R L IWDTAGQERFHALGPIYYR S+GA+LVYDITD DSF+KVK+WV+EL++M G +
Sbjct: 60 GRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTE 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
I L I GNK DLE+QR V ++A +YA++VGA + TSAK N G+ E+F L+ MLE+
Sbjct: 120 IALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTHLMLEQ 178
>gi|301104324|ref|XP_002901247.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262101181|gb|EEY59233.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 144/168 (85%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
ST FKVVLLGEG VGKTS++LRY++ +++E+ ++TLQAS+L+K+L + R+ L++WDT
Sbjct: 5 STKKFKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNCRVALSLWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD +SF KV+ WV+EL++++G+DI + IAGNK D
Sbjct: 65 AGQERFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
L + R V +++A++YA+SVGA HF TSAK+NRG+E++F+EL++RML +
Sbjct: 125 LHRNRKVPEDEAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLNR 172
>gi|323454773|gb|EGB10642.1| hypothetical protein AURANDRAFT_22182 [Aureococcus anophagefferens]
Length = 210
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 158/210 (75%), Gaps = 10/210 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDK----FNEKHITTLQASFLNKKLNI-AGKRLNLAIWD 70
FKVVLLGEG VGKTS++LRYV+ + ++++ ++TLQAS+L+K+L++ AG+ +L+IWD
Sbjct: 6 FKVVLLGEGRVGKTSILLRYVKGERVPAYSDRQVSTLQASYLDKRLSLRAGQSASLSIWD 65
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR ++GA+LVYDITD +SF+KV+ WV+EL++++G +I +TIAGNK+
Sbjct: 66 TAGQERFHALGPIYYRDADGALLVYDITDFESFQKVRKWVRELRQIVGQEIAITIAGNKV 125
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DLE R V + +A YA SVGA H +TSAK+N+G+E+ F ELS+RM + E A+
Sbjct: 126 DLESSRAVPEAEALDYAASVGATHVYTSAKLNKGLEDAFAELSERMATRRNETRGPGAAG 185
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L G+ R ++ +V+D P + K CC
Sbjct: 186 LP--GAKRSSISIVDD---PVAPKKKDSCC 210
>gi|195393122|ref|XP_002055203.1| GJ18919 [Drosophila virilis]
gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila virilis]
Length = 229
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAI 68
+ T +FK VLLGEGCVGKTS+VLRY+EDKFN +H++TLQASF+ KK+ + +R L I
Sbjct: 8 AGPTLNFKAVLLGEGCVGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDEQRAQLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+M G++I L I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
K DLE QR + E A +YAQ+VGA + TSAK N G+ E+F L+Q M+E
Sbjct: 128 KTDLEDQRAISYETALRYAQTVGAQYVETSAKENEGVNELFELLTQLMVE 177
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 153/206 (74%), Gaps = 4/206 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FKVVLLG+G VGKTS+VLRYV ++F++ T+QAS+L K+L++ G L+IWDTAGQE
Sbjct: 11 FKVVLLGDGRVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLEK 134
RFHALGPIYYR ++GA+LVYDI D DSF +VKNWVKEL+KM N +I LTIAGNK D++K
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDK 130
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +D+E+YA S+GA HF TSAK+N GI+E F++++ R LE+ ++ A ++ +
Sbjct: 131 LRQVDLQDSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCLEQRRKSTAASSNGSTPA 190
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
S R++VV+V+D+ S CC
Sbjct: 191 FSQRKSVVIVDDQ---PPPPPPSRCC 213
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 153/206 (74%), Gaps = 4/206 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FKVVLLG+G VGKTS+VLRYV ++F++ T+QAS+L K+L++ G L+IWDTAGQE
Sbjct: 11 FKVVLLGDGEVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLEK 134
RFHALGPIYYR ++GA+LVYDI D DSF +VKNWVKEL+KM N +I LTIAGNK D++K
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDK 130
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +D+E+YA S+GA HF TSAK+N GI+E F++++ R LE+ ++ A ++ +
Sbjct: 131 LRQVDLQDSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCLEQRRKSTAASSNGSTPA 190
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
S R++VV+V+D+ S CC
Sbjct: 191 FSQRKSVVIVDDQ---PPPPPPSRCC 213
>gi|195044333|ref|XP_001991801.1| GH12858 [Drosophila grimshawi]
gi|193901559|gb|EDW00426.1| GH12858 [Drosophila grimshawi]
Length = 229
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLA 67
++ T +FK VLLGEGCVGKTS+VLRY+EDKFN H++TLQASF+ KK+ + +R L
Sbjct: 7 SAGPTLNFKAVLLGEGCVGKTSLVLRYIEDKFNTHHLSTLQASFVTKKVTLPDERRALLN 66
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
IWDTAGQERFHALGPIYYR S+GA+LVYDITD+DSF+KVK+WV+ELK+M G++I L I G
Sbjct: 67 IWDTAGQERFHALGPIYYRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALVIVG 126
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
NK DLE+QR + E A YAQ+VGA + TSAK N G+ ++F L+Q M+E
Sbjct: 127 NKTDLEEQRAISYETALLYAQTVGAQYVETSAKENEGVHDLFELLTQLMVE 177
>gi|170583481|ref|XP_001896599.1| ras-related protein Rab-21 [Brugia malayi]
gi|158596123|gb|EDP34522.1| ras-related protein Rab-21, putative [Brugia malayi]
Length = 219
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 157/214 (73%), Gaps = 8/214 (3%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
SSS ++FK+VLLGEG VGKTS++LRYVE+KF+ +H++TLQASFL+KKL++ G+ + L IW
Sbjct: 11 SSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQTVVLNIW 70
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE+FHALGPIYYR S+GA+L+YD+TD SFEK + ELK+MLG+D+ L I GNK
Sbjct: 71 DTAGQEKFHALGPIYYRDSHGALLIYDVTDSHSFEKARK--NELKRMLGDDVYLMIIGNK 128
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ--EFDLAK 187
+DLE+ R V ++A YA+S+GA +F TSAK N G+ ++F L + ++E+AQ +F
Sbjct: 129 MDLERNRNVNTDEAIGYAKSIGAKYFETSAKDNIGVTQVFDYLVKGLVERAQHSKFQGID 188
Query: 188 ASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCL 221
+ S G+ RRN +++ D+ P K CC
Sbjct: 189 ITSSSHYGASRRNDLLIIDDPPP----VKKSCCF 218
>gi|195433627|ref|XP_002064811.1| GK15003 [Drosophila willistoni]
gi|194160896|gb|EDW75797.1| GK15003 [Drosophila willistoni]
Length = 223
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA-I 68
+ ++FK VLLGEGCVGKTS+VLRY+EDKFN ++++TLQASF++K + + +R L I
Sbjct: 8 TEPIHNFKAVLLGEGCVGKTSLVLRYMEDKFNSQNLSTLQASFVSKIIIMPDQRQALLNI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERFHALGPIYYR S+GA+LVYDITD +SF KVK WV+ELK+MLGNDICL I GN
Sbjct: 68 WDTAGQERFHALGPIYYRGSDGALLVYDITDHNSFLKVKLWVRELKEMLGNDICLIIVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
KIDL++QR V + A +YAQSVGA + TSAK N G+ E+F L+Q +LE+ + L A
Sbjct: 128 KIDLDEQRVVDYDVAFEYAQSVGARYLETSAKNNEGVTELFELLTQLILEQQTQAPLTSA 187
>gi|168028226|ref|XP_001766629.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682061|gb|EDQ68482.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 222
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 153/211 (72%), Gaps = 5/211 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S + K+VLLG+G VGKTS+ LRYV + F+EK T+QAS+L K+L + G+ +NL IW
Sbjct: 16 SGAPLQIKLVLLGDGRVGKTSLTLRYVNNIFSEKQTATIQASYLTKRLVVDGQAVNLCIW 75
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR ++ A+LVYD+ D+DSF++V++WV+ELKKM I L IAGNK
Sbjct: 76 DTAGQERFHALGPIYYRDADAALLVYDLLDKDSFDRVQSWVRELKKMASKKIVLAIAGNK 135
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
D++K R V ED+ KYA+ +GA HF TSAK+N GIEE F+++++R+ ++ LA+
Sbjct: 136 SDMDKLRQVNMEDSVKYAELIGAKHFVTSAKLNTGIEEAFMDIARRVTQQR----LAEDP 191
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
E GS R++VV+++ T+S T S CC
Sbjct: 192 ESLAGGSRRKSVVIIDKLPQETTSPT-SRCC 221
>gi|294460994|gb|ADE76067.1| unknown [Picea sitchensis]
Length = 209
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 150/206 (72%), Gaps = 8/206 (3%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
FK+VLLG+G VGKTS+VLRYV+D F++ T+QAS+L K+LNI G + L+IWDTAGQ
Sbjct: 11 PFKLVLLGDGRVGKTSLVLRYVDDVFSDSQTATVQASYLTKRLNINGVVVTLSIWDTAGQ 70
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR ++ A+LVYDI D+DSF +V+NWVKEL++M DI L IA NK DL +
Sbjct: 71 ERFHALGPIYYRDADAALLVYDIMDKDSFTRVRNWVKELRQMASKDIILAIAANKSDLVR 130
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
+ + ++AE+YA S+GA HF TSAK+N GIE++FL+++ R LEK ++ + + S + +R
Sbjct: 131 SQKIDLQEAERYAASIGAKHFVTSAKLNTGIEQVFLDITTRALEK-RKSSMEEFSSIQKR 189
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V E + P +S CC
Sbjct: 190 KGM---VIVDEQPESP----PQSKCC 208
>gi|260784384|ref|XP_002587247.1| hypothetical protein BRAFLDRAFT_129905 [Branchiostoma floridae]
gi|229272388|gb|EEN43258.1| hypothetical protein BRAFLDRAFT_129905 [Branchiostoma floridae]
Length = 172
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 138/207 (66%), Gaps = 43/207 (20%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FKVVLLGEGCVGKTS+VLRY EDKFN+KHI+TLQASFL KKLNIAGKR+NLAIW
Sbjct: 9 HQFKVVLLGEGCVGKTSLVLRYCEDKFNDKHISTLQASFLTKKLNIAGKRVNLAIW---- 64
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
VKNWVKEL+KMLG+++ L IAGNKIDLE
Sbjct: 65 --------------------------------VKNWVKELRKMLGSEVTLCIAGNKIDLE 92
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
KQR V ++AE YA SVGA HFHTSAK+N+G+EEMFL+L++RMLEK +K ++
Sbjct: 93 KQRNVPADEAEAYATSVGAKHFHTSAKLNKGVEEMFLDLTKRMLEKDSN---SKPDATAK 149
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
GS RRN+ + EDE KSGCC
Sbjct: 150 PGSTRRNIQITEDE----PQEQKSGCC 172
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 140/181 (77%), Gaps = 3/181 (1%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M+ ++D+ S + FK+VLLGEGCVGK+S+VLR+VE+KF+ KH++T+QASF NK +N+
Sbjct: 1 MLETNVDQKS---FKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVE 57
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
+ +L IWDTAGQE++HALGPIYYR SNG +LV+DITD SFEKVKNWV E+K LGN
Sbjct: 58 DCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNT 117
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
+ I GNKIDLE++R V ++DAE YA+S GA++ TSA+ N GI + F L+ +M+E +
Sbjct: 118 AEILIVGNKIDLEEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHS 177
Query: 181 Q 181
+
Sbjct: 178 R 178
>gi|168021891|ref|XP_001763474.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685267|gb|EDQ71663.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 150/205 (73%), Gaps = 6/205 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+V+LG+G VGKTS+ LRYV + F+EK + T+QASFL K+L + G+ ++L IWDTAGQE
Sbjct: 9 IKLVILGDGRVGKTSLALRYVHNVFSEKQMATIQASFLTKRLTVDGQVVSLCIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFHALGPIYYR ++ A+LVYD+ D+DSF++V++WV+ELKKM +I L+IAGNK D+ K
Sbjct: 69 RFHALGPIYYRDADAALLVYDLLDKDSFDRVQSWVRELKKMASKNIVLSIAGNKSDMAKS 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+DAE YA+S+GA HF TSAK+N GIEE F+++++R++++ A+ + G
Sbjct: 129 LHGNMQDAEMYAESIGATHFVTSAKLNAGIEETFMDIARRVMQQRA----AEGIDNPASG 184
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R++VV+ + E T +++ CC
Sbjct: 185 PRRKSVVIADKETANTPPTSR--CC 207
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 134/169 (79%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
++ FK+VLLGEGCVGK+S+VLR+VE+KF+ KH++T+QASF NK +N+ + +L IWDTA
Sbjct: 9 SFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTA 68
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQE++HALGPIYYR SNG +LV+DITD SFEKVKNWV E+K LGN + I GNKIDL
Sbjct: 69 GQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDL 128
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
E++R V ++DAE YA+S GA++ TSA+ N GI + F L+ +M+E ++
Sbjct: 129 EEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSR 177
>gi|290998075|ref|XP_002681606.1| rab family small GTPase [Naegleria gruberi]
gi|284095231|gb|EFC48862.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
SFK+VLLGEG VGKTS+ LR+++D F++ +T+QA++L K + + +++ L++WDTAGQ
Sbjct: 6 SFKIVLLGEGRVGKTSLTLRFIKDVFDDNQQSTIQATYLQKDIIVGNQQVTLSVWDTAGQ 65
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR ++GA+LVYDITD+D+F++ K WV EL+K+LG+DI +TI GNK D+ K
Sbjct: 66 ERFHALGPIYYRNADGALLVYDITDQDTFDRAKTWVMELRKVLGDDIVITIVGNKCDMIK 125
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +E A +YAQSVGA H SAK N+ + E FL+L++R+LEK + S + R
Sbjct: 126 HRQVSEEQALEYAQSVGANHLLVSAKANKNVAESFLDLTKRILEKKANTPMG-GSPQAHR 184
Query: 195 GSMR 198
S+R
Sbjct: 185 ASVR 188
>gi|268532416|ref|XP_002631336.1| C. briggsae CBR-RAB-21 protein [Caenorhabditis briggsae]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 148/207 (71%), Gaps = 9/207 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FKVVLLGEGCVGK+S+VLR+VE+KF+ +H++T+QASF NK + + + L IWDTAG
Sbjct: 9 FKFKVVLLGEGCVGKSSLVLRFVENKFSTRHLSTIQASFQNKTVQVDDCKAELHIWDTAG 68
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE++HALGPIYYR SNG +LV+DIT++ SF+KVKNWV E+K LG + I GNKIDL+
Sbjct: 69 QEKYHALGPIYYRGSNGVLLVFDITEQRSFKKVKNWVLEIKTCLGKTAEILIVGNKIDLD 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R V +++AE YA+S GA++ TSA+ NRGI E F L+++M++ ++ + LS
Sbjct: 129 DERQVSRQEAESYAESEGALYMETSAQENRGISEAFTALTEKMIQHSR--TATAEAPLS- 185
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R++ ++++E P S + CC
Sbjct: 186 ----NRSIRLIDEE--PLEESRRKKCC 206
>gi|341881170|gb|EGT37105.1| hypothetical protein CAEBREN_13223 [Caenorhabditis brenneri]
Length = 210
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 146/207 (70%), Gaps = 8/207 (3%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK+VLLGEGCVGK+S+VLR+VE+KF+ +H++T+QASF++K ++I + L IWDTAG
Sbjct: 11 FKFKIVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFVSKTIHIDDCKAELHIWDTAG 70
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE++HALGPIYYR SNG +LV+DITD SFE+VKNWV E+K LG + I GNK DLE
Sbjct: 71 QEKYHALGPIYYRGSNGVLLVFDITDRRSFERVKNWVLEIKTCLGKTAEILIVGNKTDLE 130
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R + ++DAE YA S A++ TSA+ N GI E F L+ +M+E A+ S +S
Sbjct: 131 DERLISRQDAEVYADSENALYMETSAQDNIGIPEAFEALTAKMIEHART--APTESPIS- 187
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R++ +++D+D S +K GCC
Sbjct: 188 ----NRSIRLIDDDDEARGSRSK-GCC 209
>gi|168025719|ref|XP_001765381.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162683434|gb|EDQ69844.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 145/203 (71%), Gaps = 6/203 (2%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+VLLG+G VGKTS+ LRY+ + F EK + T+QAS+L K+L++ G+ +N+ IWDT GQERF
Sbjct: 11 LVLLGDGRVGKTSLALRYINNVFFEKQMATIQASYLTKRLSVDGQDVNICIWDTTGQERF 70
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
H LGP YYR ++ A+LVYD+ D+DSF++VK+WV+ELKKM I L IAGNK D+++ R
Sbjct: 71 HGLGPFYYRDADAALLVYDLLDKDSFDRVKSWVRELKKMASKTIVLAIAGNKSDMDQSRH 130
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSM 197
V DA Y++S+GA HF SAK+N GIEE FL+ ++R++++ +A SE + +G
Sbjct: 131 VNMHDA-VYSESIGASHFVASAKLNTGIEEAFLDQARRVIQQR----VAVGSE-NNKGVA 184
Query: 198 RRNVVVVEDEDLPTSSSTKSGCC 220
RR +V+ D+ + + + S CC
Sbjct: 185 RRRSIVIVDKPIAAITPSTSECC 207
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 130/168 (77%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FKVVLLGEGCVGK+S+VLR+VE+KF+ +H++T+QASF +K ++I + L IWDTAG
Sbjct: 11 FKFKVVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFQSKTVHIDDCKAELHIWDTAG 70
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE++HALGPIYYR SNG +LV+DITD SFEKVKNWV E+K LG + I GNKIDLE
Sbjct: 71 QEKYHALGPIYYRGSNGVLLVFDITDRRSFEKVKNWVLEIKTCLGKTAEILIVGNKIDLE 130
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+R V ++DAE YA++ GA++ TSA+ N GI + F L+ +M++ A+
Sbjct: 131 DERQVSRQDAEVYAETEGALYMETSAQENMGISDAFEALTSKMIDHAR 178
>gi|432108534|gb|ELK33248.1| Ras-related protein Rab-21 [Myotis davidii]
Length = 202
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 117/138 (84%)
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNK
Sbjct: 51 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 110
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DLEK+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK +
Sbjct: 111 VDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGN 170
Query: 190 ELSRRGSMRRNVVVVEDE 207
S+ G+ RR V +++DE
Sbjct: 171 GSSQPGAARRGVQIIDDE 188
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 141/209 (67%), Gaps = 8/209 (3%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+ SFK+VLLG+G VGKTS+VLRYV D F++K T+QAS+L K+L + G + L+IWDT
Sbjct: 9 PSVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDT 68
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQE+FHALGPIYYR ++ A+LVYDITD D+F +V WVKELK+M DI + IA NK D
Sbjct: 69 AGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSD 128
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
L + + + +A YA+S+GA F TSAK GI+++F ++++R+LEK + +S+
Sbjct: 129 LVRSKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLEKRKN-----SSDG 183
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ +++V+DE CC
Sbjct: 184 LSLAHPKKGILIVDDE---PEKEPPPKCC 209
>gi|239789806|dbj|BAH71503.1| ACYPI009976 [Acyrthosiphon pisum]
Length = 145
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 110/140 (78%)
Query: 81 GPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQ 140
GPIYYRMSNGA+LVYDITDEDSF+KVKNW+KELKKMLG++ICL IAGNKIDLEK RTV
Sbjct: 4 GPIYYRMSNGAILVYDITDEDSFQKVKNWIKELKKMLGSEICLVIAGNKIDLEKDRTVSL 63
Query: 141 EDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRN 200
EDAEKYA SVGAVHFHTSAKMN GIEE+FL L + M+EKA + L+R GS RR
Sbjct: 64 EDAEKYASSVGAVHFHTSAKMNSGIEEIFLSLCRMMIEKADKQTADNLVTLNRSGSTRRR 123
Query: 201 VVVVEDEDLPTSSSTKSGCC 220
V+++DED S + CC
Sbjct: 124 TVIIDDEDDVPSKESFRWCC 143
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 141/208 (67%), Gaps = 8/208 (3%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+ SFK+VLLG+G VGKTS+VLRYV D F++K T+QAS+L K+L + G + L+IWDTA
Sbjct: 12 SVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTA 71
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQE+FHALGPIYYR ++ A+LVYDITD D+F +V WVKELK+M DI + IA NK DL
Sbjct: 72 GQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDL 131
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
+ + + +A YA+S+GA F TSAK GI+++F ++++R+LE+ + +S+
Sbjct: 132 VRSKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKN-----SSDGL 186
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ +++V+DE CC
Sbjct: 187 SLAHPKKGILIVDDE---PEKEPPPKCC 211
>gi|145347543|ref|XP_001418223.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578452|gb|ABO96516.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 214
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 127/166 (76%), Gaps = 5/166 (3%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKL---NIAGKRLNLA 67
S++ +FKVVLLGEG VGKTS++LRYVE+ F+E T+QA++L+K++ N LN
Sbjct: 6 SASNAFKVVLLGEGRVGKTSLLLRYVENTFSETQTPTVQATYLSKRVALENDGAATLN-- 63
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+WDTAGQERFHALGPIYYR ++ AVLVYDITD DSF++VK+WVKEL+++ G++I L +
Sbjct: 64 VWDTAGQERFHALGPIYYRDADAAVLVYDITDSDSFDRVKSWVKELRQIAGSEISLAVCA 123
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
NK DLE+ R V Q D E YA+S+GA F TSAK ++G+ + F+ ++
Sbjct: 124 NKSDLERARKVSQSDGETYAKSIGAAFFSTSAKADKGVAQAFMSVA 169
>gi|384245047|gb|EIE18543.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 215
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 130/176 (73%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA ++S S K+VLLGEG VGKTS++ R+V + F E T+QA+F++++L I
Sbjct: 1 MARHQLPKAASKQSMKIVLLGEGRVGKTSLMARFVHNSFKEDQQATIQAAFMSRQLQIDS 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+++ +A+WDTAGQERFH+L P+YYR ++ A+LVYDITD D+ E+V++WVKEL+ M+G+DI
Sbjct: 61 QQVEVALWDTAGQERFHSLAPLYYRDADAALLVYDITDRDTLERVRHWVKELRTMVGDDI 120
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
LTI GNK DL ++RTV +E+A ++AQS+GA H SAK +GIE +Q++L
Sbjct: 121 VLTILGNKSDLARERTVPEEEAAEFAQSIGAQHVSVSAKTGQGIETAVSNSAQKVL 176
>gi|116007254|ref|NP_001036322.1| Rab21, isoform A [Drosophila melanogaster]
gi|30923579|gb|EAA46056.1| Rab21, isoform A [Drosophila melanogaster]
Length = 189
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 4/188 (2%)
Query: 36 VEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLV 94
+ED+FN +H++TLQASF+++K+++ G+R L IWDTAGQERFHALGPIYYR S+GA+LV
Sbjct: 1 MEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLV 60
Query: 95 YDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVH 154
YDITD DSF+KVK+WV+EL++M G +I L I GNK DLE+QR V ++A +YA++VGA +
Sbjct: 61 YDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEALQYARTVGAQY 120
Query: 155 FHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTS-- 212
TSAK N G+ E+F L+Q MLE+ + AS L + N+ +D + P
Sbjct: 121 VETSAKENEGVAELFELLTQLMLEQLSQRQ-PDASPLRLQNPDTDNLNNSDDSEAPDPGD 179
Query: 213 SSTKSGCC 220
+ + CC
Sbjct: 180 PAGQRSCC 187
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 121/163 (74%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S +FK+VLLG+G VGKTS+VLRYV + F+EK T+QAS+L K++ I G + LAIWD
Sbjct: 44 PSATTFKLVLLGDGRVGKTSLVLRYVNNVFSEKQQATVQASYLTKRVVIEGVPITLAIWD 103
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFHALGPIYYR ++ A+LVYD+TD DSF +V+ WVKEL++M I + IA NK
Sbjct: 104 TAGQERFHALGPIYYRDADAALLVYDMTDNDSFVRVRKWVKELQQMASKTIIIAIAANKS 163
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
DL + + ++AE YA S+GA F TSAK GI+E+FL+++
Sbjct: 164 DLVRSKKFDIQEAESYAASIGARVFVTSAKSGEGIDEVFLDIA 206
>gi|281210023|gb|EFA84191.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 159
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 120/162 (74%), Gaps = 4/162 (2%)
Query: 59 IAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+AGKR+ L IWDTAGQERFHALGPIYYR S GA++VYDITD DSF K KNW+KELK MLG
Sbjct: 1 MAGKRVCLTIWDTAGQERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKAMLG 60
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
N+I L I GNK DLEK R + E+AE YAQSVGA H+ TSAK+N+G+EE+FL+L++RML
Sbjct: 61 NEIVLCIIGNKCDLEKTRVIPLEEAEAYAQSVGAKHYSTSAKLNKGVEELFLDLTKRMLS 120
Query: 179 KAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
K+ +++ S + + + +V ++ SS+ + GCC
Sbjct: 121 KSTVSTSGSSNQSSTTSNRQERIPIVPED----SSNKQEGCC 158
>gi|342183893|emb|CCC93373.1| putative small GTPase [Trypanosoma congolense IL3000]
Length = 256
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 141/229 (61%), Gaps = 21/229 (9%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF---LNKKLNIAGKRLNLA 67
SST S+KVVLLGEG VGKTS+V R+V D F+ + +T QAS +N L + K +NL
Sbjct: 3 SSTPSYKVVLLGEGRVGKTSLVTRFVNDSFDPQQRSTTQASMYSSVNVPLLNSDKTVNLN 62
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+WDTAGQERFHALGPIYYR +NGA+LVYD+TD D+ EKV+ W++EL+ ++G+ I L +
Sbjct: 63 VWDTAGQERFHALGPIYYRSANGAILVYDVTDGDTLEKVRLWIRELRAVVGDQIQLVVCA 122
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE----- 182
NK DLE++R V +E K+A+S GA HF TSA+ + E F L+ +
Sbjct: 123 NKSDLEQEREVSEEKGRKFAKSHGAQHFSTSARTGMNVAEAFQTLATAIASTGGGGSGGS 182
Query: 183 -------------FDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSG 218
F+ +S + + RR ++ +EDE+ P ++T +G
Sbjct: 183 NITSASGAGGGVVFESEDSSTWAPKRLKRRGLLRIEDEEYPDLTTTDAG 231
>gi|308805074|ref|XP_003079849.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
gi|116058306|emb|CAL53495.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
Length = 221
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 138/206 (66%), Gaps = 7/206 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQE 75
+VVLLGEG VGKTS+++R+V+ F+E T++AS+L K + + + R L +WDTAGQE
Sbjct: 21 QVVLLGEGRVGKTSLLVRFVQSTFDESQAPTVRASYLTKTVRLESDARATLNVWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFHALGPIYYR ++ A++VYDITD DSFE+ K WVKEL+++ G +I + + NK DLE+
Sbjct: 81 RFHALGPIYYRDADAAIVVYDITDADSFERAKAWVKELRRIAGAEISIAVCANKSDLERA 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDLAKASELSRR 194
R V +D E YA+ +GA TSAK ++G+E+ F+ +++ + +++ + A +S + R
Sbjct: 141 RRVSNDDGEAYAKGIGASFHSTSAKTDKGVEQAFMSVARALDMKRGKSPVPAGSSGVLRS 200
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
S++ + E+E P T CC
Sbjct: 201 RSLK---IAAEEETKP--KGTFGDCC 221
>gi|224004870|ref|XP_002296086.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|209586118|gb|ACI64803.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 183
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 127/183 (69%), Gaps = 24/183 (13%)
Query: 16 FKVVLLGEG-CVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI--------------- 59
+KVVLLGEG C GKTS++LRY+E+ + E +TLQAS+L+K + I
Sbjct: 1 YKVVLLGEGKCFGKTSILLRYIENSYVEGRPSTLQASYLDKHIVINDDDNVTASDYQRSS 60
Query: 60 ----AGKR-LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELK 114
G+R L+IWDTAGQER+H+LGPIYYR + GA+LVYDITD SFE+V+NW KEL+
Sbjct: 61 LSPRRGRREAQLSIWDTAGQERYHSLGPIYYRDAKGAILVYDITDRPSFERVRNWTKELR 120
Query: 115 KMLGND--ICLTIAGNKIDLEKQ-RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLE 171
KM+G++ IC+ I GNK+DLE+Q R V ++A YA SVGA SAK G+E++F+E
Sbjct: 121 KMVGDNTKICIVIVGNKLDLERQSRVVDTDEARTYATSVGAGFGEVSAKTGYGVEDVFVE 180
Query: 172 LSQ 174
L++
Sbjct: 181 LTK 183
>gi|407041628|gb|EKE40861.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 203
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 137/206 (66%), Gaps = 8/206 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFN-EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
FKVVLLGEG VGKTS++LRY ++ F E+ T QAS+++K LNI + IWDTAGQ
Sbjct: 5 FKVVLLGEGKVGKTSMILRYTQNFFTPEEGPRTTQASYVSKTLNIDKNDYIINIWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E++ AL PIYYR S GA+LVYDIT+ SF++V+ V ++ MLG++ C+ I GNK+DL +
Sbjct: 65 EKYQALTPIYYRDSQGAILVYDITEPRSFQRVQTEVDNIRDMLGDNCCIVIVGNKMDLVQ 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR + +E+A+KYA+SV A+H+ S GI ++F L+++M++K + EL R
Sbjct: 125 QRKISKEEADKYAESVKAIHYLCSCATGDGISDVFEGLTKQMVDKRKSL---GDDELFDR 181
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
+++ +V +D D + KS CC
Sbjct: 182 ---KKSTLVFQD-DKNNTRQAKSDCC 203
>gi|428182166|gb|EKX51028.1| hypothetical protein GUITHDRAFT_135041 [Guillardia theta CCMP2712]
Length = 210
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 120/163 (73%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG+ VGKT +V R++E KF +T+ ASF+ KK+N+ G RL + IWDTAGQER
Sbjct: 9 KVVVLGDTGVGKTCLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQIWDTAGQER 68
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR + A+LV D T+ DS+EKV++WV+ELK+ +I L +A NK DL ++R
Sbjct: 69 FRSMAPMYYRGAEAAILVLDCTNADSYEKVRSWVEELKRNASGEIFLALACNKCDLVEER 128
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
V QE+AE YA+S+GAV TSAK N+GI+E+F +++ +++K
Sbjct: 129 RVAQEEAEAYAKSIGAVCMETSAKSNKGIDELFGAVAKGLVQK 171
>gi|71746708|ref|XP_822409.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832077|gb|EAN77581.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 269
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF---LNKKLNIAGKRLNLA 67
SS S+KVVLLGEG VGKTS++ R+V D F+ + +T QAS +N L + K +NL
Sbjct: 3 SSVPSYKVVLLGEGRVGKTSLISRFVNDTFDAQQRSTTQASMYSSVNVPLLNSDKTVNLN 62
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+WDTAGQERFHALGPIYYR +NGA+LVYD+TD D+ EKV+ W++EL+ ++G+ I L +
Sbjct: 63 VWDTAGQERFHALGPIYYRNANGAILVYDVTDADTLEKVRLWIRELRAVVGDQIQLVVCA 122
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
NK DLE++R V +E ++A+ GA H TSA+ + E F L+
Sbjct: 123 NKSDLEQEREVSEEKGRRFAKDHGAQHLSTSARTGMNVAEAFQTLA 168
>gi|261332105|emb|CBH15098.1| Ras-related protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 269
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF---LNKKLNIAGKRLNLA 67
SS S+KVVLLGEG VGKTS++ R+V D F+ + +T QAS +N L + K +NL
Sbjct: 3 SSVPSYKVVLLGEGRVGKTSLISRFVNDTFDAQQRSTTQASMYSSVNVPLLNSDKTVNLN 62
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+WDTAGQERFHALGPIYYR +NGA+LVYD+TD D+ EKV+ W++EL+ ++G+ I L +
Sbjct: 63 VWDTAGQERFHALGPIYYRNANGAILVYDVTDADTLEKVRLWIRELRAVVGDQIQLVVCA 122
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
NK DLE++R V +E ++A+ GA H TSA+ + E F L+
Sbjct: 123 NKSDLEQEREVSEEKGRRFAKDHGAQHLSTSARTGMNVAEAFQTLA 168
>gi|67472129|ref|XP_651927.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537435|dbj|BAB40672.1| small GTPase Rab21 [Entamoeba histolytica]
gi|56468719|gb|EAL46541.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449703549|gb|EMD43982.1| small GTPase Rab21, putative [Entamoeba histolytica KU27]
Length = 203
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 136/206 (66%), Gaps = 8/206 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFN-EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
FKVVLLGEG VGKTS++LRY ++ F E+ T QAS+++K LNI + IWDTAGQ
Sbjct: 5 FKVVLLGEGKVGKTSMILRYTQNFFTPEEGPRTTQASYVSKTLNIDKNDYIINIWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E++ AL PIYYR S GA+LVYDIT+ SF++V+ V ++ MLG+ C+ I GNK+DL +
Sbjct: 65 EKYQALTPIYYRDSQGAILVYDITEPRSFQRVQTEVDNIRDMLGDSCCIVIVGNKMDLVQ 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR + +E+A+KYA+SV A+H+ S GI ++F L+++M++K + EL R
Sbjct: 125 QRKISKEEADKYAESVKAIHYLCSCATGDGISDVFEGLTKQMVDKRKSL---GDDELFDR 181
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
+++ +V +D D + KS CC
Sbjct: 182 ---KKSTLVFQD-DKNNTRQAKSDCC 203
>gi|71415848|ref|XP_809976.1| small GTPase [Trypanosoma cruzi strain CL Brener]
gi|70874440|gb|EAN88125.1| small GTPase, putative [Trypanosoma cruzi]
Length = 291
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK----LNIAGKRLNLAIWDT 71
+KVVLLGEG VGKTS+V R+ D F+E +T+QAS L+ +G ++ + +WDT
Sbjct: 5 YKVVLLGEGRVGKTSLVSRFAHDAFDENQSSTIQASMYTSADVPLLDGSGAKVKINVWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD D+ EKV+ W++EL+ ++GN I L I GNK D
Sbjct: 65 AGQERFHALGPIYYRNADGALLVYDITDADTLEKVRLWIRELRAVVGNQIQLVICGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
E++R + +E AE++A+S A+HF TSAK + F L+
Sbjct: 125 REEERDISKEKAEEFAKSHEALHFVTSAKTGENVAVAFQALA 166
>gi|167376950|ref|XP_001734226.1| rab21 [Entamoeba dispar SAW760]
gi|165904413|gb|EDR29637.1| rab21, putative [Entamoeba dispar SAW760]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 138/206 (66%), Gaps = 8/206 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFN-EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
FKVVLLGEG VGKTS++LRY ++ F E+ T QAS+++K L+I + IWDTAGQ
Sbjct: 5 FKVVLLGEGKVGKTSMILRYTQNFFTPEEGPRTTQASYVSKTLSIDKNDYIINIWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E++ AL PIYYR S GA+LVYDIT+ SF++V+ V ++ MLG++ C+ I GNK+DL +
Sbjct: 65 EKYQALTPIYYRDSQGAILVYDITEPRSFQRVQTEVDNIRDMLGDNCCIVIVGNKMDLIQ 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR + +E+A+KYA+SV A+H+ S GI ++F L+++M++K + + EL R
Sbjct: 125 QRKISKEEADKYAESVKAIHYLCSCATGDGISDVFEGLTKQMVDKRKS---SGDDELFDR 181
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
+++ +V +D D + KS CC
Sbjct: 182 ---KKSTLVFQD-DKNNTRQAKSDCC 203
>gi|407842272|gb|EKG01036.1| small GTPase, putative [Trypanosoma cruzi]
Length = 291
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK----LNIAGKRLNLAIWDT 71
+KVVLLGEG VGKTS+V R+ D F+E +T+QAS L+ +G ++ + +WDT
Sbjct: 5 YKVVLLGEGRVGKTSLVSRFAHDAFDENQSSTIQASMYTSADVPLLDGSGAKVKINVWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD D+ EKV+ W++EL+ ++G+ I L I GNK D
Sbjct: 65 AGQERFHALGPIYYRNADGALLVYDITDADTLEKVRLWIRELRAVVGDQIQLVICGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
E++R + +E AE++A+S A+HF TSAK + F L+
Sbjct: 125 REEERDISKEKAEEFAKSHEALHFVTSAKTGENVAVAFQALA 166
>gi|407421038|gb|EKF38784.1| small GTPase, putative [Trypanosoma cruzi marinkellei]
Length = 291
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 114/162 (70%), Gaps = 4/162 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK----LNIAGKRLNLAIWDT 71
+KVVLLGEG VGKTS+V R+ D F+E +T+QAS L+ +G ++ + +WDT
Sbjct: 5 YKVVLLGEGRVGKTSLVSRFAHDIFDENQSSTIQASMYTSADVPLLDGSGAKVKINVWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD D+ EKV+ W++EL+ ++GN I L I GNK D
Sbjct: 65 AGQERFHALGPIYYRNADGALLVYDITDADTLEKVRLWIRELRAVVGNQIQLVICGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
E++R + +E AE +A++ A+HF TSAK + F L+
Sbjct: 125 REEERDITKEKAEAFAKTHEALHFVTSAKTGENVAVAFQALA 166
>gi|71421735|ref|XP_811888.1| small GTPase [Trypanosoma cruzi strain CL Brener]
gi|70876601|gb|EAN90037.1| small GTPase, putative [Trypanosoma cruzi]
Length = 291
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK----LNIAGKRLNLAIWDT 71
+KVVLLGEG VGKTS+V R+ D F+E +T+QAS L+ +G ++ + +WDT
Sbjct: 5 YKVVLLGEGRVGKTSLVSRFAHDAFDENQSSTIQASMYTSADVPLLDGSGAKVKINVWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYDITD D+ EKV+ W++EL+ ++G+ I L I GNK D
Sbjct: 65 AGQERFHALGPIYYRNADGALLVYDITDADTLEKVRLWIRELRAVVGDQIQLVICGNKSD 124
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
E++R + +E AE++A+S A+HF TSAK + F L+
Sbjct: 125 REEERDIRKEKAEEFAKSHEALHFVTSAKTGENVAVAFQALA 166
>gi|145497120|ref|XP_001434549.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401676|emb|CAK67152.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 133/207 (64%), Gaps = 9/207 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAG 73
K+V+LGEG VGKT + LRY +D+FNE +++ A++ +K +++ G K + LAIWDTAG
Sbjct: 4 PIKIVMLGEGQVGKTCLTLRYCQDQFNENQESSVNATYFDKVVDLGGGKDIKLAIWDTAG 63
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE FHAL +YYR + GAVLVYD+T ++SF KV+ WV+EL++ DI + +AGNK D++
Sbjct: 64 QEIFHALTTVYYRDAYGAVLVYDVTYKESFLKVEKWVEELRQFGTKDISIVVAGNKCDMK 123
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
Q + + + E+Y + +GA HF TSAK GI E+F L + + K Q A E
Sbjct: 124 NQMQIDKNEVEEYCKKIGAKHFFTSAKAGLGITELFRALGESISIKVQ------AQE--S 175
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+G ++ + + + +D S+S GCC
Sbjct: 176 KGKKKKGLQIKDVKDTKKSNSKNDGCC 202
>gi|403357746|gb|EJY78504.1| hypothetical protein OXYTRI_24338 [Oxytricha trifallax]
Length = 227
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 116/162 (71%), Gaps = 2/162 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAGQE 75
K+V+LGE VGKTS+ +R+ +F+EK +TL AS L +N+ G +++ L IWDTAGQE
Sbjct: 9 KIVVLGEARVGKTSLTVRFCMGQFDEKQQSTLDASCLENTVNLPGGQQMRLTIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+HAL P+YYR + GA++VYDITD+DSF KV W+KEL+K L ++ + IAGNK D+
Sbjct: 69 RYHALNPVYYRGAEGALIVYDITDQDSFTKVNTWIKELRKYLPSETPIIIAGNKCDMS-N 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
R + E+AE YA+ VG+ H TSAK G+ E+F LS++++
Sbjct: 128 RVIPLEEAENYARGVGSEHISTSAKTGAGVIELFQTLSKKII 169
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 135/220 (61%), Gaps = 8/220 (3%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M ++S++ N+ S FK+VLLGE VGK+S+VLR+V +F E +T+ A+FL + + +
Sbjct: 1 MSSDSVNPNAKSV-PFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVPLG 59
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
+ IWDTAGQER+ +L P+YYR + A++VYDIT DSF++ KNWVKEL++ +
Sbjct: 60 DTIVKFEIWDTAGQERYKSLAPMYYRGAAAAIVVYDITSADSFQRAKNWVKELQRQGTTN 119
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
I + +AGNK+DLE +R V +A+ YA+ G + TSAK + E+F+ +++++ K
Sbjct: 120 IVIALAGNKVDLEDKRQVESAEAKSYAEDNGLLFMETSAKAATNVNELFVAIARKLPSKE 179
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + S+L+ ++ + D P K GCC
Sbjct: 180 TDNNNNVNSDLTP-------AIIPKPGDQPPERKQKGGCC 212
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 1/192 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S Y FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ G + IW
Sbjct: 2 SKQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGSTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK K W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKAKTWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DLE++R V+QE+A+ YA+ G + TSAK G+ ++F EL++++ + A AS
Sbjct: 122 VDLEERRQVLQEEAQNYAKEEGLMWGETSAKTGLGVNDIFTELAKKLPQTAPPPQARGAS 181
Query: 190 ELSRRGSMRRNV 201
G R V
Sbjct: 182 ARGSAGGPRAAV 193
>gi|145541947|ref|XP_001456661.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424474|emb|CAK89264.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 132/206 (64%), Gaps = 9/206 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAGQ 74
K+V+LGEG VGKT + LRY +D+FNE +++ A++ +K +++ G K + LAIWDTAGQ
Sbjct: 5 IKIVMLGEGRVGKTCLTLRYCQDQFNESQESSVNATYFDKAVDLGGGKDIKLAIWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E FHAL +YYR + GAVLVYD+T ++SF KV+ WV+EL++ DI + +AGNK D++
Sbjct: 65 EIFHALTTVYYRDAYGAVLVYDVTYKESFMKVEKWVEELRQFGTKDISIVVAGNKCDMKN 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
Q + + + E+Y + +GA HF TSAK GI E+F L + + K Q A E +
Sbjct: 125 QMQIDKNEVEEYCKKIGAKHFFTSAKAGVGITELFRSLGESISIKVQ------AQE--SK 176
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
G ++ + + + +D S+S CC
Sbjct: 177 GKKKKGLQIKDVKDTKKSNSKNDVCC 202
>gi|71423948|ref|XP_812628.1| ras-related protein Rab21 [Trypanosoma cruzi strain CL Brener]
gi|70877433|gb|EAN90777.1| ras-related protein Rab21, putative [Trypanosoma cruzi]
Length = 232
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 135/193 (69%), Gaps = 5/193 (2%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQAS-FLNKKLNIA-GKRLNLAIWDTA 72
+ K+V+LGEG VGKTS++ R+V D F E+ +T +AS + N + ++ G + L+IWDTA
Sbjct: 7 NMKIVMLGEGRVGKTSLLQRFVSDSFEEECESTTKASMYANVTVTVSDGAKAKLSIWDTA 66
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKID 131
GQER+HALGPIYYR + GA+LVYDITD +SF KVK W+KEL++++GN +I + + GNKID
Sbjct: 67 GQERYHALGPIYYRDAQGAILVYDITDYESFLKVKIWLKELQQVVGNQNISVVVVGNKID 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD--LAKAS 189
LE+QR+V ++AE++A A H++ SAK++ I E F +++ ++ + E D L S
Sbjct: 127 LERQRSVTVKEAEEWANQQNAKHYNVSAKLSIHISEPFNGIAKSVIARINEADRILHPQS 186
Query: 190 ELSRRGSMRRNVV 202
+ G +RN V
Sbjct: 187 GKIKDGVKKRNFV 199
>gi|71404283|ref|XP_804862.1| ras-related protein Rab21 [Trypanosoma cruzi strain CL Brener]
gi|70868037|gb|EAN83011.1| ras-related protein Rab21, putative [Trypanosoma cruzi]
Length = 232
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 137/205 (66%), Gaps = 8/205 (3%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQAS-FLNKKLNIA-GKRLNLAIWDTA 72
+ K+V+LGEG VGKTS++ R+V D F E+ +T +AS + N + ++ G R L+IWDTA
Sbjct: 7 NMKIVMLGEGRVGKTSLLQRFVSDSFEEECESTTKASMYANVTVTVSDGARAKLSIWDTA 66
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKID 131
GQER+HALGPIYYR + GA+LVYDITD +SF KVK W+KEL++++GN +I + + GNKID
Sbjct: 67 GQERYHALGPIYYRDAQGAILVYDITDYESFLKVKIWLKELQQVVGNQNISVVVVGNKID 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD--LAKAS 189
LE+QR V ++AE++A A H++ SAK++ I E F ++ + + E D L S
Sbjct: 127 LERQRRVTVKEAEEWANQQNAKHYNVSAKLSLHISEPFNGIATSVFARINEADRILHPQS 186
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSS 214
+ G +RN V + PT SS
Sbjct: 187 GKIKDGVKKRNFVGL---GPPTQSS 208
>gi|167539657|ref|XP_001751185.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770174|gb|EDQ84003.1| predicted protein [Monosiga brevicollis MX1]
Length = 114
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 89/104 (85%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGEGCVGKTS+V RY E+ F + H TTLQAS L+K +NI KR+ L IWDTAGQE
Sbjct: 5 FKIVLLGEGCVGKTSIVRRYCENVFVDGHQTTLQASCLSKMMNIQAKRVRLNIWDTAGQE 64
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
RFHALGPIYYR S GAVLVYDITD+DSF+KVKNWVKELKKML N
Sbjct: 65 RFHALGPIYYRNSQGAVLVYDITDQDSFKKVKNWVKELKKMLDN 108
>gi|145547898|ref|XP_001459630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834452|emb|CAI44550.1| rab_A63 [Paramecium tetraurelia]
gi|124427456|emb|CAK92233.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAG 73
K+V+LGEG VGKT + L+Y +D+FNE +++ A+F K +++ G K + LAIWDTAG
Sbjct: 4 PIKIVMLGEGRVGKTCLTLKYCKDQFNENQQSSIDATFFEKSVDLGGGKNITLAIWDTAG 63
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE FHAL +YYR + GAVLVYD+T ++SF KV+ WV+EL+ DI + +AGNK D++
Sbjct: 64 QEIFHALTTVYYRDAYGAVLVYDVTYKESFMKVEKWVEELRSFGTKDISIVVAGNKSDMK 123
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
Q + + + E+Y + +GA HF TSAK GI EMF L + + K Q A E
Sbjct: 124 NQMQIDKNEVEEYCKKIGAKHFFTSAKSGIGINEMFKSLGESISIKVQ------AQE--S 175
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+G ++ + + + +D + GCC
Sbjct: 176 KGKKKKGLQIKDVKDPKKQNQKNDGCC 202
>gi|407394036|gb|EKF26771.1| ras-related protein Rab21, putative [Trypanosoma cruzi marinkellei]
Length = 228
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 137/205 (66%), Gaps = 8/205 (3%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQAS-FLNKKLNIA-GKRLNLAIWDTA 72
+ K+V+LGEG VGKTS++ R+V D F E+ +T +AS + N + I G R L+IWDTA
Sbjct: 3 NMKIVMLGEGRVGKTSLLQRFVSDSFEEECESTTKASMYANVTVTIPDGVRAKLSIWDTA 62
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKID 131
GQER+HALGPIYYR + GA+LVYDITD +SF KVK W+KEL++++GN +I + + GNKID
Sbjct: 63 GQERYHALGPIYYRDAQGAILVYDITDYESFLKVKIWLKELQQVVGNQNISVVVVGNKID 122
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD--LAKAS 189
LE QR V ++AE++A A H++ SAK++ I E F ++ ++ + E D L S
Sbjct: 123 LEHQRRVTVKEAEEWANQQNAKHYNVSAKLSLHISEPFNGIATSIIARINEADRVLHPQS 182
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSS 214
+ G +RN++ + PT SS
Sbjct: 183 GKMKDGEKKRNLMGLGP---PTQSS 204
>gi|407867396|gb|EKG08564.1| ras-related protein Rab21, putative [Trypanosoma cruzi]
Length = 232
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 138/205 (67%), Gaps = 8/205 (3%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQAS-FLNKKLNIA-GKRLNLAIWDTA 72
+ KVV+LGEG VGKTS++ R+V D F E+ +T +AS + N + ++ G + L+IWDTA
Sbjct: 7 NMKVVMLGEGRVGKTSLLQRFVSDSFEEECESTTKASMYANVTVTVSDGAKAKLSIWDTA 66
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKID 131
GQER+HALGPIYYR + GA+LVYDITD +SF KVK W+KEL++++GN +I + + GNKID
Sbjct: 67 GQERYHALGPIYYRDAQGAILVYDITDYESFLKVKIWLKELQQVVGNQNISVVVVGNKID 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD--LAKAS 189
LE+QR V ++AE++A A H++ SAK++ I E F ++ ++ + E D L S
Sbjct: 127 LERQRRVTVKEAEEWANQQNAKHYNVSAKLSIHISEPFNGIATSVIARINEADRILHPQS 186
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSS 214
+ G +RN V + PT SS
Sbjct: 187 GKIKDGVKKRNFVGL---GPPTQSS 208
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 129/206 (62%), Gaps = 14/206 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIWDTAGQ 74
FK+VLLGE VGK+SVV R+V+D F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 46 FKLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGAAFLTQTIQLDDTTTIKFEIWDTAGQ 105
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR +N A++VYDIT E S E+ K W KEL++ DI + +AGNK+DLE
Sbjct: 106 ERYKSLAPMYYRNANAAIVVYDITQESSLERAKAWTKELQRQANQDIVIALAGNKVDLES 165
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR V +E AE +A G + F SAK GI+E+F ++++++ ++Q K + L +
Sbjct: 166 QRQVPKEIAETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLPLESQ----LKPNRLQNK 221
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
G D P++++ K+ CC
Sbjct: 222 GV---------DLQRPSTNNQKNSCC 238
>gi|390340630|ref|XP_003725281.1| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 163
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 110/158 (69%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S KV LLG VGKTS+ R+V+ F+EK+++T+ +FL++ L + A+WDTAGQ
Sbjct: 5 SIKVCLLGTTWVGKTSITTRFVQGNFDEKYVSTIGGAFLSRSLYFQNIEYSFALWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF ++ P+ YR + A++VYDIT +DSFE V +W+ EL+ M +I + + GNK+DLE
Sbjct: 65 ERFRSMAPLTYRSAAAALIVYDITKQDSFEDVDSWISELRSMGPEEILIYVIGNKVDLES 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
+R V +E AE+YAQ+ G HFH+SAK +GIE++F +
Sbjct: 125 RRVVDREVAERYAQTKGVFHFHSSAKTGQGIEDIFYHI 162
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 128/205 (62%), Gaps = 17/205 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + KNWVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA G + TSAK + ++FL ++ ++ + SE+S G
Sbjct: 141 RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK----------SEVSSGG 190
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V+ D D P SSS CC
Sbjct: 191 AGTR---VLNDADAPRSSS----CC 208
>gi|123426563|ref|XP_001307064.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736292|gb|AAX97475.1| small Rab GTPase RabE2 [Trichomonas vaginalis]
gi|121888672|gb|EAX94134.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S+KVV LGEG VGKTS+ R+V+ F+ +T+ A+F K +N K++N+ +WDTAGQ
Sbjct: 2 SYKVVFLGEGRVGKTSIGKRWVDGFFDPSMRSTISAAFFQKTVNAGSKKINIQLWDTAGQ 61
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E +H+L PIYY+ + A+LVY +TD SFEK++ W KEL G++I + + GNKIDL
Sbjct: 62 EEYHSLAPIYYKDAVAAILVYSVTDSKSFEKMQQWRKELVSSRGDNIKIILCGNKIDLPS 121
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QRTV + AE A+ G +F SAK +GIE MFL L ++ L
Sbjct: 122 QRTVQYDQAEAIAKQYGCPYFEVSAKTGQGIETMFLRLG----------EILSTIPLQNT 171
Query: 195 GSMRR---NVVVVEDEDLPTSSSTKSGCC 220
G RR ++ VV+ E+ K GCC
Sbjct: 172 GPTRRSHASLQVVDAEE----KKQKGGCC 196
>gi|74831405|emb|CAI39298.1| rab_C61 [Paramecium tetraurelia]
Length = 209
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAGQ 74
K+V+LGEG VGKT + LRY +D+FNE +++ A++ +K +++ G K + LAIWDTAGQ
Sbjct: 5 IKIVMLGEGRVGKTCLTLRYCQDQFNESQESSVNATYFDKAVDLGGGKDIKLAIWDTAGQ 64
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E FHAL +YYR + GAVLVYD+T ++SF KV+ WV+EL++ DI + +AGNK D++
Sbjct: 65 EIFHALTTVYYRDAYGAVLVYDVTYKESFMKVEKWVEELRQFGTKDISIVVAGNKCDMKN 124
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA---KASEL 191
Q + + + E+Y + +GA HF TSAK GI E+F L E +L K
Sbjct: 125 QMQIDKNEVEEYCKKIGAKHFFTSAKAGVGITELFRSLG----ESINSINLGISIKVQAQ 180
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+G ++ + + + +D S+S CC
Sbjct: 181 ESKGKKKKGLQIKDVKDTKKSNSKNDVCC 209
>gi|330822635|ref|XP_003291754.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
gi|325078046|gb|EGC31720.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
Length = 231
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 113/161 (70%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKT+ +RY E F ++ T+ ASFL K +NI G ++ IWDTAGQ+R
Sbjct: 10 KVVLLGSSDVGKTAAAIRYAEGVFPKRPTPTIGASFLTKTINIEGNKIKYLIWDTAGQDR 69
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L P+YYR + A+LV+DIT + SF+ VK+WV+ELK + DI L + GNK+DL+ +R
Sbjct: 70 FRSLTPMYYRGACVAILVFDITHQKSFDTVKDWVEELKSNIQEDIVLVVCGNKLDLQHKR 129
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
V +E A+ YA + A++ SAK N G+E+MFLE++++++
Sbjct: 130 QVKRETAKMYADEIKALYVEISAKENEGVEQMFLEIARKLI 170
>gi|118348924|ref|XP_001007935.1| Ras family protein [Tetrahymena thermophila]
gi|89289702|gb|EAR87690.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777792|dbj|BAJ21292.1| Rab-family small GTPase Rab21B [Tetrahymena thermophila]
Length = 207
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 122/165 (73%), Gaps = 2/165 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQE 75
K+V++GEG VGKTS+ LRY + ++++ +T+ S+L K + + ++N+AIWDTAGQE
Sbjct: 8 KIVIIGEGRVGKTSLTLRYCKGEYSDTQESTINVSYLEKTVQVNETDKVNIAIWDTAGQE 67
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLEK 134
+F ++ P+YY+ + A++VYDIT ++SF+KVK+WV EL ++L N I + IAGNK DLE
Sbjct: 68 KFKSITPMYYQQAVCAIIVYDITYKESFDKVKSWVTELTQILDTNKIVICIAGNKCDLEN 127
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R + ++ AE YA+SVGA HF TSAK NRGI+E+F + Q +L++
Sbjct: 128 NRQIDKQFAEDYAKSVGARHFLTSAKNNRGIDELFQYVGQEILKR 172
>gi|320168533|gb|EFW45432.1| GTP-binding protein rab11 [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 112/162 (69%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTS+VLRYV+ + +T+ ASF+ +K+ + ++ + IWDTAGQER
Sbjct: 31 KVVILGSQGVGKTSLVLRYVQGTYAADITSTIGASFMTRKMTVDRCQVRMQIWDTAGQER 90
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LVYDITDE +F+ +K+WVKEL+ + +DI L + GNK D+ QR
Sbjct: 91 FRSMAPMYYRGANAALLVYDITDEQTFDDIKSWVKELQHNVDSDIVLVLVGNKSDMASQR 150
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V E A YA+ + A+ F TSAK + GI + FL ++ M++
Sbjct: 151 KVSGETAAIYAEEINALFFETSAKADSGISDAFLHAAREMIK 192
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 117/186 (62%), Gaps = 7/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT EDSF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML-------EKAQEFDLAKA 188
R V ++DA+ YA S+ A+ TSAK I E+F+E+S+R+ A+ F L +
Sbjct: 126 REVPEKDAKDYADSIHAIFVETSAKNAININEVFVEISKRIPVVDEAGGSSARGFKLGRQ 185
Query: 189 SELSRR 194
+ SRR
Sbjct: 186 ASESRR 191
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGKTS+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S AV+VYDIT EDSF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDLAKASELSRR 194
R V ++DA+ YA+S+ A+ TSAK I E+F E+S+R+ + A AK+ +L R+
Sbjct: 126 REVSEKDAKDYAESIHAIFVETSAKNAININEVFTEISKRIPVVDAAGGSSAKSIKLGRQ 185
Query: 195 GSMRR 199
S R
Sbjct: 186 VSESR 190
>gi|440791438|gb|ELR12676.1| Rasrelated protein Rab5, putative [Acanthamoeba castellanii str.
Neff]
Length = 218
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 117/164 (71%), Gaps = 1/164 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ VGKTS+ LR+V+D F+ + T+ ASFL K L I+ ++ L IWDTAGQER
Sbjct: 21 KIVLLGDTGVGKTSLALRFVQDAFSSRTAPTVGASFLTKVLLISDCKIKLRIWDTAGQER 80
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L P+YYR + AV+ +DIT E+SF+K+++WVKEL+ L +I L + GNK DLEK R
Sbjct: 81 FRSLAPMYYRGACAAVIAFDITREESFKKMQDWVKELQINLSEEIILVVVGNKADLEKFR 140
Query: 137 TVMQEDAEKYAQSVGAVHF-HTSAKMNRGIEEMFLELSQRMLEK 179
V + AE YA+++GA+ + SAK GIEE+F+ ++ ++ EK
Sbjct: 141 KVSKATAEDYARNIGALGYVEASAKTGDGIEEIFMNIAHKLNEK 184
>gi|340501006|gb|EGR27830.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 190
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 124/174 (71%), Gaps = 5/174 (2%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI--AGKRLNLAIWDTAGQ 74
K+V++GEG VGKTS+ LRY +D+F+E +T+ A +L K +N+ + + +N+AIWDTAGQ
Sbjct: 9 KIVIVGEGRVGKTSITLRYCQDQFSEDQESTINAFYLEKSINLQNSDEVVNIAIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLE 133
E+F A+ P YY + A+LVYDIT ++SF+KVK+W+KEL++ + + + IAGNK DLE
Sbjct: 69 EKFRAIVPTYYHDAVCAILVYDITIKESFDKVKSWIKELQECTDRSKLIVCIAGNKGDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
QR + ++ AE YA+ VGA HF TSAK N GI EMF ++ + + Q F+L K
Sbjct: 129 NQRQITKQSAEDYAKQVGAKHFTTSAKANLGINEMFQFIADEI--QRQGFNLQK 180
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDNFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT EDSF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++DA+ YA S+ A+ TSAK I E+F+E+SQR+
Sbjct: 126 REVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISQRI 166
>gi|328869307|gb|EGG17685.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 244
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 117/163 (71%), Gaps = 2/163 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG VGKT++ +RY E F + ++T+ ASFL K +N+ G R+ IWDTAGQER
Sbjct: 39 KIVLLGSTDVGKTAISVRYAEGIFPMRPLSTVGASFLTKNVNVDGNRIKFQIWDTAGQER 98
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L +YYR ++ A+LV+D++ + SF+K+K WV+ELK + DI + + GNKID K+R
Sbjct: 99 FRSLASMYYRGASVAILVFDVSSQKSFDKIKEWVQELKINIQEDIVMIVCGNKID--KER 156
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
V ++ A+ YA + A+++ TSAKMN GI+ MFLE+++R+L K
Sbjct: 157 VVDRDIAKTYADDIKALYYETSAKMNEGIDVMFLEIAKRLLIK 199
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 116/163 (71%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAG
Sbjct: 24 FQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAG 83
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+H+L P+YYR + A++VYD+T++DSF + KNWVKEL++ +I + +AGNK DL
Sbjct: 84 QERYHSLAPMYYRGAQAAIVVYDVTNQDSFTRAKNWVKELQRQASPNIVIALAGNKNDLT 143
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R VM E+A+ YA+ G + TSAK + ++F+E+++++
Sbjct: 144 TKRLVMYEEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKL 186
>gi|405964669|gb|EKC30126.1| Ras-related protein Rab-21 [Crassostrea gigas]
Length = 293
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 108/154 (70%)
Query: 25 CVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIY 84
VGKTSVV+RYV F++ T+ ASF KL + R+ L +WDTAGQERF ++ P+Y
Sbjct: 90 AVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQVWDTAGQERFRSMAPMY 149
Query: 85 YRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAE 144
YR +N A+LVYDIT EDSF +K+WV ELKK + I + + GNK DLE+ R V +DA+
Sbjct: 150 YRKANAAMLVYDITSEDSFYDIKDWVSELKKNVDTPIVMCLVGNKNDLEESREVNVKDAQ 209
Query: 145 KYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+YA S+GA+ TSA N G+EE FL+++Q++++
Sbjct: 210 EYADSIGALFHETSALKNVGVEEAFLQVAQQLVK 243
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%)
Query: 25 CVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIY 84
VGKTSVV+RYV F++ T+ ASF KL + R+ L +WDTAGQERF ++ P+Y
Sbjct: 3 AVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQVWDTAGQERFRSMAPMY 62
Query: 85 YRMSNGAVLVYDITDEDSFEKVKNWVKELKK 115
YR +N A+LVYDIT EDSF +K+WV + K
Sbjct: 63 YRKANAAMLVYDITSEDSFYDIKDWVSAVGK 93
>gi|145552140|ref|XP_001461746.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834320|emb|CAI44516.1| rab_B63 [Paramecium tetraurelia]
gi|124429582|emb|CAK94373.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAGQE 75
K+V+LGEG VGKT + L+Y +D+F+E +++ A+F K +++ G K + LAIWDTAGQE
Sbjct: 6 KIVMLGEGRVGKTCLTLKYCKDQFDENQQSSIDATFFEKSVDLGGGKNITLAIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
FHAL +YYR + GAVLVYD+T ++SF KV+ WV+EL+ DI + +AGNK D++ Q
Sbjct: 66 IFHALTTVYYRDAYGAVLVYDVTYKESFLKVEKWVEELRSFGTKDISIVVAGNKSDMKNQ 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ + + E+Y + +GA HF TSAK GI+EMF L + + K Q
Sbjct: 126 MQIDKNEVEEYCKKIGAKHFFTSAKSGVGIQEMFKTLGESISIKVQ 171
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 113/161 (70%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + +N+ + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA+ YA+ + TSAK + E+FL +++++
Sbjct: 142 RMVEYDDAQAYAEENSLLFMETSAKTAMNVNEIFLAIAKKL 182
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ DI + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPDIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ AV TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLGE VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT EDSF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLLDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRI 166
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 115/161 (71%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYD+T++DSF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V+ E+A+ YA+ G + TSAK + ++FLE+++++
Sbjct: 142 RLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKL 182
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + + E+F+ +++++ + E A A+ RG
Sbjct: 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKS--EPQAAGANSGRSRG 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
V + E T+ TK+ CC
Sbjct: 200 -----VDLTE-----TAPPTKAPCC 214
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM++DA+ YA S+ AV TSAK I E+F+E+S+R+
Sbjct: 126 REVMEKDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + + E+F+ +++R L K+ + G
Sbjct: 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKR---------LPKSEPQAAGG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCCLT 222
S RN V E + K+ CC T
Sbjct: 193 SSGRNRGVDLTE---AAQPAKAPCCST 216
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK-AQEFDLAKASELSRR 194
R VM++DA+ YA S+ A+ TSAK I E+F+E+S+R+ A K +L R+
Sbjct: 126 REVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSSGKGFKLRRQ 185
Query: 195 GSMRR 199
S+ +
Sbjct: 186 PSVTK 190
>gi|332373994|gb|AEE62138.1| unknown [Dendroctonus ponderosae]
Length = 167
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/101 (77%), Positives = 89/101 (88%), Gaps = 4/101 (3%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MANS S + SFKVVLLG+GCVGKTS+VLRYVEDKFN KHITT+QASFLNKK+NI G
Sbjct: 1 MANS----SIAAVSFKVVLLGKGCVGKTSLVLRYVEDKFNGKHITTIQASFLNKKINIDG 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDS 102
+RL LAIWDTAGQE+FHALGPIYYR +NGAVLVYDIT+ ++
Sbjct: 57 QRLTLAIWDTAGQEKFHALGPIYYRSANGAVLVYDITEGEN 97
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + + E+F+ +++++ + E A A+ RG
Sbjct: 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKS--EPQAAGANSGRSRG 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
V + E T+ TK+ CC
Sbjct: 200 -----VDLTE-----TAQPTKAPCC 214
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLGE VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E+SF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRI 166
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM++DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|432103526|gb|ELK30630.1| Ras-related protein Rab-31 [Myotis davidii]
Length = 665
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM++DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLGSK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA+ + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVDFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAPG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ PTS +S CC
Sbjct: 193 APGRNRGVDLQENSPTS---RSQCC 214
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 7/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E+SF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-------LEKAQEFDLAKA 188
R V ++DA+ YA S+ A+ TSAK I E+F+E+S+R+ + F L +
Sbjct: 126 REVPEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRIPIVDAAGATSGKGFKLGRQ 185
Query: 189 SELSRR 194
+ SRR
Sbjct: 186 ASESRR 191
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 132/211 (62%), Gaps = 19/211 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ G + F TSAK + + E+F +++++ L +A
Sbjct: 138 DSPDKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-------PLDQAGP 190
Query: 191 LSRRGSMRRNVVVVEDEDL-PTSSSTKSGCC 220
+ R S R V DL P S++T++G C
Sbjct: 191 RNLRSSARPGV------DLRPESTNTQAGGC 215
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 126/205 (61%), Gaps = 9/205 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ Y++ G + TSAK + ++FL ++++ L K ++ A S +G
Sbjct: 142 RAVELEEAQAYSEENGLLFMETSAKTAMNVNDIFLAIAKK-LPKTEQGTSAVGGGASGQG 200
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RR V DL GCC
Sbjct: 201 --RRGV------DLSEHPQQSGGCC 217
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R + +DA+ YA + TSAK + + E+F+ +++++ + E A A+ RG
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKLPKN--EPQPAGANTARNRG 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCCLT 222
V + E T+ K CC T
Sbjct: 200 -----VDLTE-----TAQPAKGPCCST 216
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGAN----SVRG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT TKS CC
Sbjct: 197 ---RGVDLTE----PT-QQTKSQCC 213
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 301 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 360
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 361 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 420
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 421 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAPG 471
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ PTS +S CC
Sbjct: 472 APGRNRGVDLQENSPTS---RSQCC 493
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ AV TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 129/205 (62%), Gaps = 15/205 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + +++ + IWDTAGQE
Sbjct: 21 FKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+FE+ KNWVKEL++ I + +AGNK+DL
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAGNKLDLNTM 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R+V ++++ YA G + TSAK + + E+F ++++ L K + G
Sbjct: 141 RSVQTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEK---------LPKNETTNTAG 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RR +VE E ++ + S CC
Sbjct: 192 QGRR---LVESEG---ANKSLSSCC 210
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 REVPMKDAKEYAESIGAVVVETSAKCAINIEELFQGISRQI 167
>gi|390340614|ref|XP_786285.3| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 219
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 8/192 (4%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KV LG CVGKTS+ R+V+ +F+E++ +T+ A+FL++ L A+WDTAGQER
Sbjct: 23 KVCFLGNYCVGKTSITKRFVKGRFDEEYTSTIGAAFLSRSLYSQNIEYRFALWDTAGQER 82
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L P+ YR + A++VYDIT++ SF++V W+ EL++ +I + + GNK+DLE R
Sbjct: 83 FRSLAPLTYRSAAAALIVYDITNQQSFDEVNFWISELRRDGPEEILIYVIGNKVDLESYR 142
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V +E AE YAQ+ G HFH+SAK +G+EE+F + Q D K+S
Sbjct: 143 VVDREVAESYAQTKGVFHFHSSAKTGQGVEEIFYHICQ--------MDSTKSSIKENGCR 194
Query: 197 MRRNVVVVEDED 208
+N V V D D
Sbjct: 195 HHQNTVDVSDSD 206
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 130/205 (63%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A +S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNTGANSS----RG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT TKS CC
Sbjct: 197 ---RGVDLTE----PT-QPTKSQCC 213
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQ----SAGANSARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E P KS CC
Sbjct: 197 ---RGVDLTEPTQPP-----KSQCC 213
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 127/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++F++ K WVKEL++ +I + +AGNK DL ++
Sbjct: 80 RYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + E+FL ++++M + ++ G
Sbjct: 140 RMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPK--------SDAQNPTHG 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V V E P +SGCC
Sbjct: 192 AHNRGVNVQGSEQQP-----RSGCC 211
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAPG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RN VV E +S ++S CC
Sbjct: 193 GPGRNRVVDLQE---SSQPSRSQCC 214
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAPG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RN VV E +S ++S CC
Sbjct: 193 GPGRNRVVDLQE---SSQPSRSQCC 214
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 10/213 (4%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++N+ + + IW
Sbjct: 2 NSNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNK 121
Query: 130 IDL---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
+DL +++R V +E+AE AQ G + F TSAK + E+FL + +++ K QE
Sbjct: 122 LDLLESDEERKVAREEAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQEVQNG 181
Query: 187 KASELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
+ ++ + NV +S + SGC
Sbjct: 182 NGASVNEVSRVDLNVA-------GSSGANSSGC 207
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K S G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQSAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 31 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 90
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 91 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 150
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 151 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 191
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA+ YA + TSAK + + E+F+ +++R+
Sbjct: 142 RAVEFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRL 182
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 115/164 (70%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTA
Sbjct: 16 TCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTA 75
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + A++VYDIT+++SF+K KNWVKEL++ +I + +AGNK D+
Sbjct: 76 GQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADV 135
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+RTV E+A YA+ + TSAK + + ++F+ +++++
Sbjct: 136 ANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 179
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 115/164 (70%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTA
Sbjct: 17 TCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTA 76
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + A++VYDIT+++SF+K KNWVKEL++ +I + +AGNK D+
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADV 136
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+RTV E+A YA+ + TSAK + + ++F+ +++++
Sbjct: 137 ANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 12/217 (5%)
Query: 4 NSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
N + S+ FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + +
Sbjct: 11 NGPNAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTT 70
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQER+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I +
Sbjct: 71 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVI 130
Query: 124 TIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEF 183
+AGNK DL +R + +DA+ YA + TSAK + + E+F+ +++++ + +
Sbjct: 131 ALAGNKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ- 189
Query: 184 DLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
A S R R V + E T+ K CC
Sbjct: 190 --APGSSAGR----NRGVDLAE-----TAQPAKGPCC 215
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APSRNRGVDLQENSPAS---RSQCC 214
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 115/164 (70%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTA
Sbjct: 18 TCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTA 77
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + A++VYDIT+++SF+K KNWVKEL++ +I + +AGNK D+
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADV 137
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+RTV E+A YA+ + TSAK + + ++F+ +++++
Sbjct: 138 ANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 181
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 12/172 (6%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLGE VGK+S+VLR+V+ ++ E T+ A+FLN+K N + + IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSIVLRFVDRQYVENREPTIGAAFLNQKCNFKDRSIKFEIWDTAGQER 82
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL---- 132
FH+L P+YYR S A++VYDIT + +K K+WVKEL++ DI + + GNK+DL
Sbjct: 83 FHSLAPMYYRNSQAAIVVYDITKAATLDKAKSWVKELQRQANTDIVIALVGNKLDLVEGE 142
Query: 133 --------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E +R V +EDA+ YA G + F TSAK + ++ +F ++Q++
Sbjct: 143 DGEPLEDEEHEREVSKEDAQAYADEAGLLFFETSAKSAQNVDNVFSSIAQKI 194
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 131/212 (61%), Gaps = 14/212 (6%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N++ + FK+VLLGE VGK+S+VLR+V F + +T+ A+FL + + + + I
Sbjct: 3 NNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+H L P+YYR + A++VYDI EDSFE+ WVKEL++ +I + +AGN
Sbjct: 63 WDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K+DL +R V +A++YA+ G + TSAK ++ + E+F+E+++++ +
Sbjct: 123 KLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPK---------- 172
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ +R GS R + +++ + + K+ CC
Sbjct: 173 TPTTRPGSGRVAIAPIDNGN----TGKKNKCC 200
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ +I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK---------LPKSE 185
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S G+M RN V E S KS CC
Sbjct: 186 PQSTGGAMGRNRGVDLHEQ---SQQNKSQCC 213
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRL 166
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 114/181 (62%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSTAAIIVYDITKEETFLTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V+++DA+ YA S+ AV TSAK I E+F+E+S+R+ K +L R+
Sbjct: 126 REVLEKDAKDYADSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLRRQS 185
Query: 196 S 196
S
Sbjct: 186 S 186
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA+ + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ----NAGASSARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E P K+ CC
Sbjct: 197 ---RGVDLTEPTQPP-----KTQCC 213
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 127/205 (61%), Gaps = 11/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V EDA+ YA+ G + TSAK + ++FL +++++ + ++S+ ++
Sbjct: 142 RMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTPGGQQSSQRNQGV 201
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R TS GCC
Sbjct: 202 NLRE-----------TSPQHSGGCC 215
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 55 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 114
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 115 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 174
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 175 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 225
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 226 APGRNRGVDLQENNPAS---RSQCC 247
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APSRNRGVDLQENNPAS---RSQCC 214
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|340056761|emb|CCC51099.1| putative small GTPase [Trypanosoma vivax Y486]
Length = 295
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF---LNKKLNIAGKRLNLAIWDT 71
++KVVLLGEG VGKTS+V R++ D F++ +T QAS +N L + ++ IWDT
Sbjct: 7 AYKVVLLGEGRVGKTSLVSRFINDTFDQHQRSTTQASMYSSVNVPLLGGDRSVHFNIWDT 66
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERFHALGPIYYR ++GA+LVYD+TD D+ EKV+ W++EL+ ++G I L + GNK D
Sbjct: 67 AGQERFHALGPIYYRNADGALLVYDVTDADTLEKVRAWIRELRAVVGERIQLVVCGNKSD 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
LE++R V +E ++A+S+GA H TSA+ + E F L+ + A+
Sbjct: 127 LEREREVDEERGAQFAKSLGAQHLSTSARTGMNVSEAFQTLATAIAGGAK 176
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 18/209 (8%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+TY FK+VLLG+ VGK+S+VLR +D++ E T+ A+FL K L + G+ + IWDT
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR SN A++VYDIT + SF + K W+ EL+ GN+ + + GNK D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAIIFLVGNKCD 123
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
L+ R + +E+AE YA+S+ + TSAK N + E+F ++++++
Sbjct: 124 LDNSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPR------------- 170
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ +G + + VV+ + + K GCC
Sbjct: 171 NEKGLIDPDEVVISN----NKNENKKGCC 195
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 92 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 151
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 152 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 211
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 212 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 262
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 263 APGRNRGVDLQENNPAS---RSQCC 284
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 55 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 114
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 115 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 174
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 175 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 225
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 226 APGRNRGVDLQENNPAS---RSQCC 247
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++F++ K WVKEL++ +I + +AGNK DL ++
Sbjct: 80 RYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + E+FL ++++M + D + +R
Sbjct: 140 RMVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKS----DAQNPTHAAR-- 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V V E P +SGCC
Sbjct: 194 --NRGVNVQGSEQQP-----RSGCC 211
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 132/211 (62%), Gaps = 19/211 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ G + F TSAK + + E+F +++++ L +A
Sbjct: 138 DSPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-------PLDQAGP 190
Query: 191 LSRRGSMRRNVVVVEDEDL-PTSSSTKSGCC 220
+ R + R V DL P S++T++G C
Sbjct: 191 RNLRSNPRPGV------DLRPESANTQAGGC 215
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 55 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 114
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 115 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 174
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 175 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 225
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 226 APGRNRGVDLQENNPAS---RSQCC 247
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E P KS CC
Sbjct: 197 ---RGVDLTEPTQPP-----KSQCC 213
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +D+F +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDTFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDT 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA +YA+S+GA+ TSAK +EE+F +S+R+
Sbjct: 126 REVTMKDAREYAESIGAIVVETSAKNAINVEELFQGISRRI 166
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGAS----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E P KS CC
Sbjct: 197 ---RGVDLTEPTQPP-----KSQCC 213
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +N+ G + IW
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVNLDDGMTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK +NW++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
DL +R V QE+A+KYA+ G + TSAK G+ ++F +++++ A
Sbjct: 122 SDLAARRQVTQEEAQKYAEEEGLMWAETSAKSGEGVSDIFTAIAKKLPTTA 172
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E+SF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++DA+ YA S+ A+ TSAK I E+F ++S+R+
Sbjct: 126 REVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 130/210 (61%), Gaps = 13/210 (6%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDT 71
TY FK+VLLGE VGK+S+V+R+V+D F+E +T+ A+FL + +++ + IWDT
Sbjct: 9 TYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDT 68
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L P+YYR +N AV+VYDIT S +K K WV EL++ +I + +AGNK D
Sbjct: 69 AGQERYKSLAPMYYRNANCAVIVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSD 128
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDLAKASE 190
L +R + + A++YA G + F TSAK + ++FL +++RM L++ LA +S
Sbjct: 129 LGARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMPLDQ-----LADSSR 183
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+R G R V DL + + +GC
Sbjct: 184 KNRNGLNSRGV------DLENTGNDANGCA 207
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+DL +R V QE+A+KYA+ G + TSAK G++E+F +++++
Sbjct: 122 LDLAARRQVSQEEAQKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKL 168
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 114/181 (62%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V++++A+ YA S+ AV TSAK I E+F+E+S+R+ K +L R+
Sbjct: 126 REVLEKEAKDYADSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLRRQS 185
Query: 196 S 196
S
Sbjct: 186 S 186
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL + +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELGQHGPPNIVVAIAGNKCDLVDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK-AQEFDLAKASELSRR 194
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+ A K +L R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQ 185
Query: 195 GSMRR 199
S R
Sbjct: 186 PSEPR 190
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAPG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E+SF+ +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDA 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++DA+ YA S+ A+ TSAK I E+F ++S+R+
Sbjct: 126 REVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V++ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVLERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLASK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula]
Length = 235
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 115/186 (61%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTS+VLR+V + F + T+ ASF + + G R+ L +WDTAGQER
Sbjct: 16 KVVVLGSQGVGKTSLVLRHVSNTFTQSVSPTIGASFFTFSMTVTGYRIKLQLWDTAGQER 75
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A++VYDIT E SFE+ + WV+EL+ + +++ L + GNK DL +R
Sbjct: 76 FRSMAPMYYRRANAALIVYDITREKSFEEAQEWVRELESKVDSNLSLCVVGNKCDLSGER 135
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V +E ++A +GA+ TSA N G++E FL+++Q ++ Q L S S
Sbjct: 136 EVSREQGLEFAHQIGAMFTETSAAQNSGVKEAFLKVAQGVISLHQHHQLKSDRSFSHGNS 195
Query: 197 MRRNVV 202
+ V
Sbjct: 196 YTAHTV 201
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 127/212 (59%), Gaps = 15/212 (7%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N++ + FK+VLLGE VGK+S+VLR+V F + +T+ A+FL + + + + I
Sbjct: 3 NNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+H L P+YYR + A++VYDI +DSFE+ WVKEL++ +I + +AGN
Sbjct: 63 WDTAGQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K+DL +R V +A++YA+ G + TSAK + + E+F+E+++++ +
Sbjct: 123 KLDLAAKRKVETAEAQQYAEENGLLFMETSAKTAQNVNELFVEIAKKLPKTPN------- 175
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R GS R + +E+ ++ K CC
Sbjct: 176 ---PRPGSGRLPIPPIEN-----NNQRKKPCC 199
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNATG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 APGRNRGVDLQENNPAS---RSQCC 214
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ + + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENNAMPIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +SQ++
Sbjct: 127 REVPMKDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQI 167
>gi|390604985|gb|EIN14376.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 208
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK-RLNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQATVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
IDL +R V QE+A+KYA+ G + F SAK G+ ++F +++++
Sbjct: 122 IDLAARRQVTQEEAQKYAEEEGLLWFEASAKTGEGVSDVFTAIAKKL 168
>gi|291231118|ref|XP_002735512.1| PREDICTED: low-Mr GTP-binding protein Rab31, putative-like
[Saccoglossus kowalevskii]
Length = 154
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 101/148 (68%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTSVVLRYV F++K T+ ASF KLNI R+ L +WDTAGQER
Sbjct: 7 KVVVLGSQGVGKTSVVLRYVSKHFSQKVTPTIGASFFTIKLNIDEHRVKLQLWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LVYDIT D+F +K+WV EL++ + I L + GNK DL + R
Sbjct: 67 FRSMAPMYYRKANAALLVYDITVPDTFNAIKSWVDELQRNVDEGIILCVLGNKCDLTEHR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRG 164
V +E+ + YA S+GA+ F TSA N G
Sbjct: 127 QVSKEEGQDYATSIGALFFETSALTNEG 154
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLSTK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A AS R
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQ---AGASNTIR-- 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E T+ TKS CC
Sbjct: 197 --GRGVDLTE-----TAQPTKSQCC 214
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+ LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 64 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 123
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R
Sbjct: 124 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 183
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 184 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 222
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 116/176 (65%)
Query: 7 DRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNL 66
D +S KVVLLG+ VGK+S+VLR+V + F +T+ ASF++K + + +
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQE++H+L P+YYR + A++VYDIT + S +KNWVKELK++ ++I + IA
Sbjct: 63 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIA 122
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
GNK DLE++R V A YA+ +GA+ TSAK + + ++F+++SQ + + E
Sbjct: 123 GNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDTNVSDLFIQISQALPTASAE 178
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA+ YA + TSAK + + E+F+ +++R+
Sbjct: 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRL 182
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 125/205 (60%), Gaps = 15/205 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WV+EL++ +I + +AGNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVRELQRQASPNIVIALAGNKADLANK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ + TSAK + ++FL ++++ L K + ++
Sbjct: 140 RMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKK---------LPKNEQAGQQQ 190
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S +R V DL + GCC
Sbjct: 191 SRQRGV------DLSQENQPSGGCC 209
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 110/166 (66%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S+ KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWD
Sbjct: 19 SAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 78
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK
Sbjct: 79 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKC 138
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 139 DLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++FE+ K WVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + E+FL ++++M K +
Sbjct: 141 RLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM---------PKTDTQNPTH 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V ++D P + ST+S CC
Sbjct: 192 AARHRGVNLQD---PDAQSTRS-CC 212
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E P S +S CC
Sbjct: 193 APGRNRGVDLQESNPAS---RSQCC 214
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+TY FK+VLLG+ VGK+S+VLR +D++ E T+ A+FL K L + G + IWDT
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR SN A++VYDIT + SF + K W+ EL+ GN+ + + GNK D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGS-GNEAIIFLVGNKCD 123
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
L R + +E+AE YA+S+ + TSAK N + E+F ++++++
Sbjct: 124 LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 131/205 (63%), Gaps = 11/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALSGNKADLSSK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + ++FL +++++ + + ++ +
Sbjct: 141 RMVDYEEAQTYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPK-------SDNTQGGPQA 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R+ V +++ T+ + SGCC
Sbjct: 194 AQRQRGVDLQE----TNQQSSSGCC 214
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ AV TSAK I E+ +E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAVFVETSAKNAININELLIEISRRI 166
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E P S +S CC
Sbjct: 193 APGRNRGVDLQESNPAS---RSQCC 214
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V E +P S +S CC
Sbjct: 193 APGRTRGVDLQESIPAS---RSQCC 214
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFLRAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +DA+ YA+ + TSAK + E+F+ ++++ L K + ++A G
Sbjct: 142 RAVEFQDAQAYAEDNSLLFMETSAKTAMNVNEVFMAIAKK-LPKNEPQNVA--------G 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E P S + CC
Sbjct: 193 APGRNRGVDLQESSPAS---RGQCC 214
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + + RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ----NPGAIPPRG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+ LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 42 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 101
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R
Sbjct: 102 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 161
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 162 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 200
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ ++F + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADLSSK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + +G
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAQG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 NTGRNRGVDLQENNPPS---RSQCC 214
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 129/210 (61%), Gaps = 13/210 (6%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDT 71
TY FK+VLLGE VGK+S+V+R+V+D F+E +T+ A+FL + +++ + IWDT
Sbjct: 7 TYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDT 66
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L P+YYR +N AV+VYDIT S +K K WV EL++ +I + +AGNK D
Sbjct: 67 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSD 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDLAKASE 190
L +R + + A++YA G + F TSAK + ++FL +++RM L++ LA +S
Sbjct: 127 LGARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMPLDQ-----LADSSR 181
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+R G R V DL S + + C
Sbjct: 182 KTRNGLNSRGV------DLENSGNNANSCA 205
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 114/167 (68%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 PSKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT+++SF K KNWVKEL++ +I + ++GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V E+A+ YA+ + TSAK + ++FL +++++
Sbjct: 135 ADLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 113/161 (70%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 78
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+FE+ KNWVKEL++ +I + ++GNK DL +
Sbjct: 79 RYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQASPNIVIALSGNKADLANK 138
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A+ YA+ + TSAK + ++FL +++++
Sbjct: 139 RMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKL 179
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----STRG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPWGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 140 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 195
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 196 ---RGVDLTE----PT-QPTRSQCC 212
>gi|73535746|pdb|1Z07|A Chain A, Gppnhp-Bound Rab5c G55q Mutant Gtpase
Length = 166
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+QA+FL + + + + IWDTAGQE
Sbjct: 6 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIQAAFLTQTVCLDDTTVKFEIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 66 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 126 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 140 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 195
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 196 ---RGVDLTE----PT-QPTRSQCC 212
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 126/209 (60%), Gaps = 18/209 (8%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+TY FK+VLLG+ VGK+S+VLR +D++ E T+ A+FL K L + G + IWDT
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR SN A++VYDIT + SF + K W+ EL+ GN+ + + GNK D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAVIFLVGNKCD 123
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
L R + +E+AE YA+S+ + TSAK N + E+F ++++++
Sbjct: 124 LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPR------------- 170
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ +G + + VV+ + + K GCC
Sbjct: 171 NEKGLIDPDEVVISN----NKNENKKGCC 195
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 129/205 (62%), Gaps = 14/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 78
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 79 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADLANK 138
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ + TSAK + ++FL +++++ + S+ + G
Sbjct: 139 RMVEYEEAQTYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPK----------SDSTASG 188
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S R +V + ++ P + +GCC
Sbjct: 189 SPRGDVSLSNNQ--PAQGT--AGCC 209
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 127 REVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 167
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEF 183
R V +DA++YA+S+GA+ TSAK IEE+F +S++ KA+ F
Sbjct: 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISEQ--RKARRF 172
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEYGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+++SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R + +DA+ YA + TSAK + + EMF+ +++++ + + + A
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKLPKNEPQAEGAN-------- 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCCLT 222
S R V + + P S S CC T
Sbjct: 194 SGRNRGVDLTEAAQPASRS----CCST 216
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 126 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL +K+ + + I
Sbjct: 2 SSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR + A++VYD+T+++SF K+WVKEL++ ++ + +AGN
Sbjct: 62 WDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLE +R V E+A YA+ G +H TSAK + ++ +F+E++Q+ L KA
Sbjct: 122 KADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQK---------LPKA 172
Query: 189 SELSRRGSMRRNVVVVEDEDLP---TSSSTKSGCC 220
+ V E E P + KSGCC
Sbjct: 173 T------------VQPEREAFPIMRPRTEQKSGCC 195
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNVTG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E P S +S CC
Sbjct: 193 APGRNRGVDLQESNPAS---RSQCC 214
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALAGNKADLSNK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA YA+ G + TSAK + ++FL +++++
Sbjct: 142 RMVEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAEKL 182
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 126/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++F++ K WVKEL++ +I + +AGNK DL ++
Sbjct: 80 RYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + E+FL ++++M + ++
Sbjct: 140 RMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPK--------SDAQNPTHA 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V V E P +SGCC
Sbjct: 192 AHNRGVNVHGSEQQP-----RSGCC 211
>gi|330846456|ref|XP_003295044.1| Rab GTPase [Dictyostelium purpureum]
gi|325074347|gb|EGC28427.1| Rab GTPase [Dictyostelium purpureum]
Length = 199
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 114/168 (67%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N++ + FK+VLLGE VGK+S+VLR+V F + +T+ A+FL + + + + I
Sbjct: 3 NNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+H L P+YYR + A++VYDI EDSFE+ WVKEL++ +I + +AGN
Sbjct: 63 WDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K+DL +R V +A++YA+ G + TSAK ++ + E+F+E+++++
Sbjct: 123 KLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKL 170
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 128/205 (62%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++FE+ K WVKEL++ +I + +AGNK DL ++
Sbjct: 82 RYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLAEK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + E+FL ++++M K +
Sbjct: 142 RLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM---------PKTDTQNPTH 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V ++D P + ST++ CC
Sbjct: 193 AARHRGVNLQD---PDAHSTRA-CC 213
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 123/205 (60%), Gaps = 9/205 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 24 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 83
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F++ KNWVKEL++ +I + +AGNK D+ +
Sbjct: 84 RYHSLAPMYYRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASPNIVIALAGNKADIANK 143
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K+ G
Sbjct: 144 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKSEPQGTAG 194
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V+ E S+ S CC
Sbjct: 195 QGGRTRTGVDLEQTNPQGSSSSRCC 219
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R + +DA+ YA + TSAK + + E+F+ +++++ + E A AS G
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK--NEPAAAGAS-----G 194
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V + E T+ CC
Sbjct: 195 ARNRGVDLTE-----TAQPASRPCC 214
>gi|403358572|gb|EJY78942.1| Ras family GTPase putative [Oxytricha trifallax]
Length = 223
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 111/162 (68%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LGE VGKTS+ R+ FNE +T+ A+ + KK+N+ K + L IWDTAGQER
Sbjct: 9 KIVVLGEARVGKTSLTYRFSSGTFNEHQPSTVDATCIEKKINVNEKSIKLVIWDTAGQER 68
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
++AL +YYR + GA++VYD TD DSF+K+ WV EL+ L ++ + +AGNK DL
Sbjct: 69 YNALNQVYYRGAEGAIVVYDATDLDSFKKMNQWVTELRNYLPAEVPILVAGNKSDLYNNI 128
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ ++ A YA+S + +F TSAK G++E+F+EL++R+++
Sbjct: 129 AISEDQARTYAKSHNSQYFATSAKTGNGVQELFMELAKRIIQ 170
>gi|66817582|ref|XP_642644.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017424|sp|Q8MYF2.1|RABJ_DICDI RecName: Full=Ras-related protein RabJ
gi|60470709|gb|EAL68683.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 256
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKT++ LRYV+ F ++ +T+ ASFL + +NI G ++ IWD+AGQ+R
Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDR 70
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L +YYR + A+LV+DIT + +F+ VK WV+ELK + +I + + GNKIDLE+ R
Sbjct: 71 FRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNR 130
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEF 183
V E A+ YA + A++ TSAK N G+E MFLE+ +++ L K E+
Sbjct: 131 QVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKLILNKHNEY 178
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
F AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 AFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ + +++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWD 75
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQER+H+L P+YYR + A++VYDIT ++SF K KNWVKEL++ +I + ++GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITSQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V E+A+ YA + TSAK + ++FL +++++
Sbjct: 136 DLANKRVVEYEEAQAYADDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|300175989|emb|CBK22206.2| unnamed protein product [Blastocystis hominis]
Length = 364
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA D + + + +K+VLLGE VGK+S+V RYV D+F + +T+ A+FL++ + I
Sbjct: 1 MAAPQDLSGTQLFKYKIVLLGETAVGKSSIVQRYVRDQFLDNQESTIGAAFLSQTIKIDN 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-D 120
+ IWDTAGQER+H+L P+YYR + GA+++YDIT +F + KNWV ELK+ GN D
Sbjct: 61 DIVKFDIWDTAGQERYHSLAPMYYRGAKGALVIYDITSRTTFARAKNWVTELKQNSGNPD 120
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
+ + +AGNK DL R V +E AE+YA+ + SAK I+ +F L++R+
Sbjct: 121 MVIALAGNKCDLAMNREVPKELAEEYAKESNILFMEVSAKTKENIDLIFETLARRL---- 176
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R P + TK GCC
Sbjct: 177 ------------PRTRTPVPSPTTTPVVAPAPAETKKGCC 204
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 115/176 (65%)
Query: 7 DRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNL 66
D +S KVVLLG+ VGK+S+VLR+V + F +T+ ASF++K + + +
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQE++H+L P+YYR + A++VYDIT + S +KNWVKELK++ ++I + IA
Sbjct: 63 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIA 122
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
GNK DLE++R V A YA +GA+ TSAK + + ++F+++SQ + + E
Sbjct: 123 GNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAE 178
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 7/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-------LEKAQEFDLAKA 188
R V ++A+++A+S+ A+ TSA+ IEE+F ++S+++ +E F L +A
Sbjct: 126 REVPMKEAKEFAESIAAIFIETSARNAVNIEELFQKISKQIPPLENPEVESNDSFKLTRA 185
Query: 189 SELSRR 194
S R
Sbjct: 186 PAPSTR 191
>gi|307777794|dbj|BAJ21293.1| Rab-family small GTPase Rab21A [Tetrahymena thermophila]
Length = 201
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 119/165 (72%), Gaps = 2/165 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-KRLNLAIWDTAGQE 75
K+V++GEG VGKTS++LR + ++++ +T+ A +L K + + + LN+ IWDTAGQE
Sbjct: 8 KIVIVGEGRVGKTSLILRCCKGEYSDNQESTINAFYLEKTIQVNDTENLNMYIWDTAGQE 67
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLEK 134
RF ++ P+YY + A++VYDIT ++SF+KVK WV EL ++L + + + I GNK DLE
Sbjct: 68 RFKSITPMYYHDAVCAIIVYDITFKESFDKVKLWVTELTQILDTSKLIICIVGNKCDLEN 127
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R + ++ AE+Y+QSVGA HFHTSAK NRG++E+F + Q + ++
Sbjct: 128 NRQISKQFAEEYSQSVGAHHFHTSAKNNRGVDELFQYIGQEIFKR 172
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E LP ++S CC
Sbjct: 197 ---RGVDLTE-HTLP----SRSQCC 213
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 4 NSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
N + S+ FK+VLLGE VGK+S++LR+V+ +F+E +T+ +FL + + +
Sbjct: 11 NGPNAASNKICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGGAFLTQTVCLDDTT 70
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQER+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I +
Sbjct: 71 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVI 130
Query: 124 TIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEF 183
+AGNK DL +R + +DA+ YA + TSAK + + E+F+ +++++ + +
Sbjct: 131 ALAGNKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ- 189
Query: 184 DLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
A S R R V + E T+ K CC
Sbjct: 190 --APGSSAGR----NRGVDLAE-----TAQPAKGPCC 215
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 128/206 (62%), Gaps = 14/206 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + +E G
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPK----------TEPQAGG 191
Query: 196 SMRRNVVVVEDEDLP-TSSSTKSGCC 220
S N + DL T+ TKS CC
Sbjct: 192 S---NTIRGRGVDLTETAQPTKSQCC 214
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 108/165 (65%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S S K+ L+ + VGK+S+V R+VED F+ T+ ASF+ K + + IWDT
Sbjct: 2 SIKSLKLCLIQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK D
Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD 121
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
L R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 122 LIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 7/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-------LEKAQEFDLAKA 188
R V ++A+++A+S+ A+ TSA+ IEE+F ++S+++ +E F L +A
Sbjct: 126 REVPTKEAKEFAESIAALFIETSARNAVNIEELFQKISKQIPPLENPEVESNDSFKLTRA 185
Query: 189 SELSRR 194
S R
Sbjct: 186 PAPSSR 191
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+ LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 44 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 103
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R
Sbjct: 104 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 163
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 164 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 202
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + G + IW
Sbjct: 2 SKHFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V QE+A+KYA+ G + TSAK G+ ++F +++++
Sbjct: 122 ADLAARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKL 168
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 117/175 (66%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R S+ K+VLLG+ GKTS+VLR+V+ +F E +T+ A+F + L++ +
Sbjct: 1 MARTGSNNIQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + AV+VYDIT DSFE+ K WV EL++ ++ + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
GNK+DL+++R V E+ E+YA+ G V TSAK + + E+F E+++R+ +KA
Sbjct: 121 VGNKVDLQQKRKVGIEEGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRLAKKA 175
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R + +DA+ YA + TSAK + + E+F+ +++++ + E A A+ RG
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN--EPQAAGANSGRNRG 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
V + + PTS + CC
Sbjct: 200 ------VDLTETAQPTSRT----CC 214
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 109/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + IWDTAGQE
Sbjct: 23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQE 82
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + KNWVKEL++ I + +AGNK DL +
Sbjct: 83 RYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAK 142
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A+ YA G + TSAK + ++FL ++ ++
Sbjct: 143 RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 183
>gi|47218775|emb|CAG02761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 228
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 10/210 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ-----RMLEKAQEFDLAKASE 190
R + +DA+ YA + TSAK + + E+F+ + + M+ A++ +
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKIAHCSLMVPPAKKLP-KNEPQ 200
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S GS R V + + PTS + CC
Sbjct: 201 ASGAGSGRNRGVDLTETAQPTSRT----CC 226
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 126/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + KNWVKEL++ +I + +AGNK DL ++
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ + TSAK + ++FL +++++ + + SR G
Sbjct: 141 RMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPK-----NEGGGPAPSRPG 195
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ N + ++ GCC
Sbjct: 196 GVNLNS--------QQTQQSEGGCC 212
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 53 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 112
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 113 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 172
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 173 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGAAAGRSRGV 231
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 232 DLHEQ-----------SQQNKSQCC 245
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 128/211 (60%), Gaps = 13/211 (6%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ +I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK---------LPKSE 185
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S G++ R V + ++ S KS CC
Sbjct: 186 PQSIGGAVGRRGVDLHEQ----SQQNKSQCC 212
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 113/164 (68%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTA
Sbjct: 18 TCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + A++VYDIT+++SF K KNWVKEL++ +I + ++GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V E+A+ YA+ + TSAK + ++FL +++++
Sbjct: 138 ANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 14 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 73
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK D+ +
Sbjct: 74 RYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADITNK 133
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ +++++ + + + G
Sbjct: 134 RAVEHQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQVGPGQG------G 187
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
+R V + E T+ +SG C +G
Sbjct: 188 RVRTGVDLQE-----TAPQGRSGQCCSG 210
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 104/158 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEIS 163
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA + ++ Y FK+VLLGE VGK+S+VLR+V++ F E +T+ A+FL + + +
Sbjct: 1 MAAARPNSTRPAYQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVQLDD 60
Query: 62 KR-LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
+ + IWDTAGQER+ +L P+YYR +N AV+VYDIT S EK KNW++EL++ +
Sbjct: 61 QTTIKYEIWDTAGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKNWIRELQRQADSQ 120
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
I + +AGNK DLE++R V DA ++A+ + F TSAK + E+F +++++
Sbjct: 121 IVIALAGNKADLEERRQVSTADARQFAEEENLLFFETSAKDATNVHEIFQAIAKKL 176
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 115/175 (65%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + + + + IW
Sbjct: 2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR + A++VYDIT+ DSF K+WVKEL++ D+ + +AGNK
Sbjct: 62 DTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
DLE +R V E+A YA+ G +H TSAK ++ +F+E+++R+ + Q+ D
Sbjct: 122 ADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPD 176
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 113/164 (68%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTA
Sbjct: 18 TCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + A++VYDIT+++SF K KNWVKEL++ +I + ++GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V E+A+ YA+ + TSAK + ++FL +++++
Sbjct: 138 ANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T++ CC
Sbjct: 197 ---RGVDLTE----PT-QPTRNQCC 213
>gi|401421663|ref|XP_003875320.1| putative small GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491557|emb|CBZ26828.1| putative small GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 288
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 114/174 (65%), Gaps = 11/174 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF-------LNKKLNIAG--KRLN 65
SFKVVLLGEG VGKTS++ RYV + F+EK +T+QAS +N + G + ++
Sbjct: 9 SFKVVLLGEGRVGKTSLISRYVHNAFDEKEASTVQASMYSSRAVPINDPSSAPGAIREVD 68
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
LA+WDTAGQERFHAL P+YYR ++GA++VYD+TD D+ KV+ W KEL ++G +I L
Sbjct: 69 LALWDTAGQERFHALAPMYYRNADGAIIVYDVTDADTLRKVRTWAKELYAVVGEGNIQLV 128
Query: 125 IAGNKIDLE-KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK D +R V + + A +GA HF SAK + + E+F ++ +++
Sbjct: 129 LCGNKADTPLAEREVSEGEGAAMAAELGASHFFASAKTGQNVAEVFSAMATQVV 182
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ----NPGGNSARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 32 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 91
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ WVKEL K +I + +AGNK DL
Sbjct: 92 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASPNIVIALAGNKADLSNI 151
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A++YA+ G + TSAK + ++FL +++++
Sbjct: 152 RVVEYEEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 192
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 132/212 (62%), Gaps = 19/212 (8%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAI 68
S++T FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + +N++ G + I
Sbjct: 3 SNNTCHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFEI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR + A++VYD+T++DSF K+WVKEL++ +++ + +AGN
Sbjct: 63 WDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDSNVVIALAGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLE +R V E+A +YA+ G +H TSAK + ++ +F+ ++ + +
Sbjct: 123 KADLETRRAVTLEEARQYAEDNGILHLETSAKTSANVKNLFVAIATNLPQ---------- 172
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S S R + + PT+S +K GCC
Sbjct: 173 ---SNTQSNRDTFPLAQ----PTASKSK-GCC 196
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 19/209 (9%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+TY FK+VLLG+ VGK+S+VLR + ++ E T+ A+FL K L + + WDT
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFECWDT 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR SN A++V+DIT + S+ + K WV EL++ ND + + GNK D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVFDITSDSSYAQAKKWVDELRES-ANDTMIFLVGNKCD 123
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
LE R+V +EDAE YA+S+ + TSAK N + E+F +L R L K +
Sbjct: 124 LEGSRSVTKEDAEAYARSISVDYIETSAKSNINVSELF-DLVARKLPKTE---------- 172
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+G + ++ VV+ + + K GCC
Sbjct: 173 --KGLIDQDEVVISNRN-----GQKKGCC 194
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 148
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 149 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|123392739|ref|XP_001300294.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736296|gb|AAX97477.1| small Rab GTPase RabF2 [Trichomonas vaginalis]
gi|121881309|gb|EAX87364.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 106/161 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y KVVL+G GKTS+V RYV +F ++++QA+F K + I GK L IWDTAG
Sbjct: 6 YRNKVVLVGTTHTGKTSIVQRYVNGQFMINSVSSMQAAFFQKNVMIGGKEQTLEIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF +L P+YYR + A++V+DITD +SF K K W+ ELK G+ I L + GNK DLE
Sbjct: 66 QERFRSLTPMYYRDARVAIVVFDITDANSFSKAKQWINELKSSRGDSISLVLVGNKSDLE 125
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
R V +A++YA+ + +F TSAK IEE+F++++Q
Sbjct: 126 FIRVVQMSEAKQYAKLLDIPYFETSAKTGVNIEEVFIQVAQ 166
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
Query: 2 MANSLDRNSS-STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M+N+ NS+ Y FK+VLLGE VGK+S+VLR+V++ F E +T+ A+FL + + I
Sbjct: 1 MSNNPRPNSTRPNYQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVKIN 60
Query: 61 GKR-LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
+ + IWDTAGQER+ +L P+YYR +N AV+VYDIT S EK K W++EL+K
Sbjct: 61 EQTTIKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKVWIRELQKQADA 120
Query: 120 DICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
I + +AGNK DLE++R V E+A+++A+ + F TSAK + + ++F +++++
Sbjct: 121 QIVIALAGNKADLEERRQVPTEEAQRFAEEENLLFFETSAKDSTNVTDIFTAIAKKL 177
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 116/171 (67%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S +FK+VLLGEG VGK+S+VLR+V +F + +T+ A+FL + + + + IWDT
Sbjct: 7 SPLNFKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGAAFLTQTVALNDTTVKFEIWDT 66
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR + A++VYDIT DSF + K+WV+EL++ +I + +AGNK D
Sbjct: 67 AGQERYHSLAPMYYRGAAAAIVVYDITSTDSFARAKSWVRELQRQGNPNIVIALAGNKSD 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
L +R V ++A +YA+ + TSAK + E+F+++++++ ++ Q+
Sbjct: 127 LASKRKVEPDEARQYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQQQ 177
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R + +DA+ YA + TSAK + + E+F+ ++++ L K +
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK---------LPKNEPQATGA 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S RN V E T+ T CC
Sbjct: 193 STGRNRGVDLTE---TAQPTSRPCC 214
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 112/167 (67%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
SS FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 16 SSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + IAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIAIAGNK 135
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 136 ADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+ LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 62 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 121
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R
Sbjct: 122 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 181
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 182 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 220
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 48 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 107
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 108 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 167
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 168 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRSRGV 226
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 227 DLHEQ-----------SQQNKSQCC 240
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 129/205 (62%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++FE+ K WVKEL++ +I + +AGNK DL ++
Sbjct: 82 RYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLAER 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + ++FL ++++M K +
Sbjct: 142 RLVEFEEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKM---------PKTDTQNPTH 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R V ++D P + ST++ CC
Sbjct: 193 AVRHRGVNLQD---PDTHSTRA-CC 213
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 118/182 (64%), Gaps = 2/182 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL-NLAIWDT 71
TY K+VLLG+ VGK+ +V+R+ +D+F+E T+ A+F+ + +NI + IWDT
Sbjct: 11 TYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGAAFMTQSVNIDDDYIVKFEIWDT 70
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L P+YYR + A++VYDIT+ DSF+ K+W+ ELK + NDI + + GNK D
Sbjct: 71 AGQERYRSLAPMYYRGAAAAIVVYDITNSDSFDGAKSWISELKSINNNDIVIALVGNKCD 130
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
LE RTV E A YA+ ++ TSAK ++E+F E++ R L ++ FD + S+
Sbjct: 131 LEGNRTVSSEIARCYAKENDILYLETSAKTGHNVQEIFEEIA-RKLPNSKRFDRSDFSDP 189
Query: 192 SR 193
++
Sbjct: 190 NK 191
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 149
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 150 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 8 LKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 67
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E+SF +KNWVKEL + ++I + IAG+K D+
Sbjct: 68 RFRALAPMYYRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPSNIVVAIAGDKCDVSDA 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQR--MLEKAQ 181
R V+++DA+ YA S+ A+ TSAK I E+F E+SQ+ +LE+++
Sbjct: 128 REVLEKDAKDYADSIHAIFVETSAKNAININEIFTEISQKIPLLERSE 175
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 148
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 149 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 148
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 149 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 129 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 179
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V E P S +S CC
Sbjct: 180 APGRTRGVDLQESNPAS---RSQCC 201
>gi|321262867|ref|XP_003196152.1| GTPase [Cryptococcus gattii WM276]
gi|317462627|gb|ADV24365.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 199
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 115/165 (69%), Gaps = 3/165 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDT 71
T SFK+VLLGE VGK+S+VLR+V ++F++ +T+ A+FL + +N+ + IWDT
Sbjct: 4 TTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVNLDESTTIKFEIWDT 62
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L PIY+R SN AV+VYDIT + SFEK K+WV+EL++ I + + GNK D
Sbjct: 63 AGQERYKSLAPIYFRNSNAAVIVYDIT-QTSFEKAKSWVRELQRQADPSIVIMLVGNKTD 121
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
++ QR +E E+YA+ G + SAK G+EE+F+E+++++
Sbjct: 122 MDSQRKTSREIGEQYAKEEGLLFAEASAKTGEGVEELFMEIAKKL 166
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 17/205 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 26 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQE 85
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF + K WVKEL++ +I + +AGNK DL
Sbjct: 86 RYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 145
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A++YA G + TSAK + ++FL +++++ + +
Sbjct: 146 RVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIAKKLPK-------------NEGT 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++N+ ++E S SGCC
Sbjct: 193 GPQQNIRPTQNEQ----SRQNSGCC 213
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 149
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 150 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRSRGV 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 200 DLHEQ-----------SQQNKSQCC 213
>gi|358055034|dbj|GAA98803.1| hypothetical protein E5Q_05491 [Mixia osmundae IAM 14324]
Length = 198
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAG 73
SFK+VLLGE GK+S+VL++V+ +F+E +T+ A+FL + +++ + IWDTAG
Sbjct: 6 SFKLVLLGESACGKSSLVLQFVKQEFSEYRESTIGAAFLTQIVSLDENTTIKFEIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL- 132
QER+ +L P+YYR + AV+VYDIT E + +K K WVKEL++ I + +AGNK+DL
Sbjct: 66 QERYRSLAPMYYRGAQAAVVVYDITSEGTLDKAKAWVKELQRQADPSIVIALAGNKVDLA 125
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E +R + +E AEKYAQ G + F TSAK + E+F EL+ +M
Sbjct: 126 ETRRAIPRETAEKYAQEEGLLFFETSAKEATNVTELFKELATKM 169
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + G
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAAG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V E P S +S CC
Sbjct: 193 APGRTRGVDLQESNPAS---RSQCC 214
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|427777835|gb|JAA54369.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 272
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 107/166 (64%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKTS++ RY + KF T+ ASF ++N+ ++ + +WDTAGQER
Sbjct: 13 KVVLLGALGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQLWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A++ YDIT SFE +K WV EL++ + I L + GNK DL + R
Sbjct: 73 FRAMAPLYYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGNKCDLMQHR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +E AE+YA+ VGA SA N GI+EMF L+ R++E ++
Sbjct: 133 AVDREMAERYARDVGAYFSECSALSNEGIDEMFRHLALRIIESEEK 178
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK N ++E+F +++++
Sbjct: 138 ENPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKL 183
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRSRGV 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 200 DLHEQ-----------SQQNKSQCC 213
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 129/205 (62%), Gaps = 11/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T++ CC
Sbjct: 197 --RGGVDLTE----PT-QPTRNQCC 214
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 62 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 121
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 122 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 181
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 182 RVVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAACRSRGV 240
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 241 DLHEQ-----------SQQNKSQCC 254
>gi|384493359|gb|EIE83850.1| hypothetical protein RO3G_08555 [Rhizopus delemar RA 99-880]
Length = 238
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 117/189 (61%), Gaps = 17/189 (8%)
Query: 5 SLDRNSSSTYS-----FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
SLD ++S K+VLLGE VGK+S+ LR+V ++ E T+ A+FL +K N+
Sbjct: 10 SLDATTTSAIPGKMKHVKLVLLGESAVGKSSIALRFVNRQYIENREPTIGAAFLTQKCNL 69
Query: 60 AGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
+ + IWDTAGQERFH+L P+YYR + A++VYDIT+ + +K K+WVKEL++
Sbjct: 70 KDRCIKFEIWDTAGQERFHSLAPMYYRNAQAAIVVYDITNASTLDKAKSWVKELQRQANT 129
Query: 120 DICLTIAGNKIDL------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEE 167
DI + + GNK+DL E +R V++EDA+ YA G + F TSAK+ + +++
Sbjct: 130 DIVIALVGNKLDLVEGQDGEPLNDEEHERKVLKEDAQAYADEAGLLFFETSAKLAQNVDQ 189
Query: 168 MFLELSQRM 176
+F + ++
Sbjct: 190 VFGSIGHKI 198
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 149
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 150 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA G + TSAK + ++FL +++++ + Q + S G
Sbjct: 141 RVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQ------SGNASTSG 194
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RR +VE + ++S CC
Sbjct: 195 QGRR---LVESDGQKAATSN---CC 213
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 29 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 88
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 89 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 148
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+
Sbjct: 149 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAA 207
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 208 GRSRGVDLHEQ-----------SQQNKSQCC 227
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 131/198 (66%), Gaps = 18/198 (9%)
Query: 8 RNSSSTYS-FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LN 65
R S + ++ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + +
Sbjct: 10 RPSGTRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDQTTVK 69
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +
Sbjct: 70 FEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIAL 129
Query: 126 AGNKIDLEK----QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKA 180
AGNK+DL + +R + + DAE YA+ G + F TSAK + ++E+F +++++ +E+A
Sbjct: 130 AGNKLDLAESDPSKRAIEKADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKLPIEQA 189
Query: 181 QEFDLAKASELSRRGSMR 198
S+RG MR
Sbjct: 190 -----------SQRGGMR 196
>gi|390335524|ref|XP_788644.2| PREDICTED: ras-related protein RabJ-like [Strongylocentrotus
purpuratus]
Length = 234
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 4/184 (2%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTS+V+RYV F+ + T+ ASF K+N+ R+ L +WDTAGQER
Sbjct: 7 KVVILGNEGVGKTSIVVRYVGKIFSNQVSPTVGASFFTFKMNVDNHRVKLHLWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A +VYDITD +FE +K W +EL++ + I + I GNK DL R
Sbjct: 67 FKAMAPMYYRKANAAFIVYDITDSKTFENMKFWAEELEQNIDGPIVMCILGNKSDLADHR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA----KASELS 192
V E+ YA S+GA+ F TSA + GI E FL ++ ++ A ++ K + S
Sbjct: 127 QVSSEEGLHYAASIGALFFETSALKDEGISEAFLRVALALISLASSTSISGMTVKPYDTS 186
Query: 193 RRGS 196
RR S
Sbjct: 187 RRQS 190
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADIANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R + Q++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAIDQQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]
Length = 211
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T + K+VLLGE VGK+S+VL++V+ +F+E +T+ A+FL + + + K N IWDTA
Sbjct: 13 TTARKLVLLGESAVGKSSIVLQFVKKQFDEWRESTIGAAFLTQTVPV--KSGNF-IWDTA 69
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+ +L P+YYR ++ AV+ +DIT SFEK ++W+ EL++ I + +AGNK+DL
Sbjct: 70 GQERYKSLAPMYYRSAHAAVVAFDITSSASFEKARSWIAELQRQADPGIVIVLAGNKLDL 129
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
QR V DAE++A+ G ++F SAK GIEEMF ++++M
Sbjct: 130 VSQRQVSTADAEQFAREEGLLYFEVSAKTAEGIEEMFQTVAEKM 173
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 133/214 (62%), Gaps = 10/214 (4%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++NI + IW
Sbjct: 2 NSNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD++ SF K ++WVKEL++ +DI + +AGNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVSKPQSFIKARHWVKELQERASSDIIIALAGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDL 185
+D+ + +R V E+ +K A G + F TSAK + + E+FL + +++ ++K E
Sbjct: 122 VDIVEDGGERKVATEEGQKLADEEGLLFFETSAKTGQNVNEVFLAIGEKIPIKKPNE--- 178
Query: 186 AKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
A+ + GS N V + D +++ SGC
Sbjct: 179 -HANNANADGSNDNNRVDITSSD--NNAAAVSGC 209
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 17/205 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQE 84
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF + K WVKEL++ +I + +AGNK DL +
Sbjct: 85 RYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADLVNK 144
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A++YA G + TSAK + ++FL + +++ + +
Sbjct: 145 RMVDYEEAKQYADENGLLFMETSAKTAVNVNDIFLAIGKKLPK-------------NEGA 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++N+ ++E S SGCC
Sbjct: 192 GQQQNIRPTQNEQ----SRQNSGCC 212
>gi|134116396|ref|XP_773152.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255773|gb|EAL18505.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 202
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S T SFK+VLLGE VGK+S+VLR+V ++F++ +T+ A+FL + + ++ + IW
Sbjct: 2 SRTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVKLSESTSIKFEIW 60
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDIT--DEDSFEKVKNWVKELKKMLGNDICLTIAG 127
DTAGQER+ +L PIY+R SN AV+VYDIT E SFEK K+WV+EL++ I + + G
Sbjct: 61 DTAGQERYKSLAPIYFRNSNAAVIVYDITQPPETSFEKAKSWVRELQRQADPSIVIMLVG 120
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
NK D+E QR +E E+YA+ G + SAK G+EE+F+E+
Sbjct: 121 NKTDMESQRKTSREIGEQYAKEEGLLFAEASAKTGEGVEELFMEI 165
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 73 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 132
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 133 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 192
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 193 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRSRGV 251
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 252 DLHEQ-----------SQQNKSQCC 265
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + ++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|398014828|ref|XP_003860604.1| small GTPase, putative [Leishmania donovani]
gi|322498826|emb|CBZ33898.1| small GTPase, putative [Leishmania donovani]
Length = 288
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 11/174 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK---LNIAG------KRLN 65
SFKVVLLGEG VGKTS++ RYV + F+EK +T+QAS + K +N A + ++
Sbjct: 9 SFKVVLLGEGRVGKTSLISRYVHNAFDEKEASTVQASMYSSKAVPINDASSAPGAIREVD 68
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
LA+WDTAGQERFHAL P+YYR ++GA++VYD+TD D+ KV+ W KEL ++G +I L
Sbjct: 69 LALWDTAGQERFHALAPMYYRNADGAIIVYDVTDADTLRKVRTWAKELYAVVGEGNIKLV 128
Query: 125 IAGNKIDLE-KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK D +R V + + A +GA HF SAK + + E+F ++ +++
Sbjct: 129 LCGNKADTPLTEREVSEGEGAAMAAELGASHFFASAKTGQNVAEVFSAMATQVV 182
>gi|146085919|ref|XP_001465392.1| putative small GTPase [Leishmania infantum JPCM5]
gi|134069490|emb|CAM67813.1| putative small GTPase [Leishmania infantum JPCM5]
Length = 288
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 11/174 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK---LNIAG------KRLN 65
SFKVVLLGEG VGKTS++ RYV + F+EK +T+QAS + K +N A + ++
Sbjct: 9 SFKVVLLGEGRVGKTSLISRYVHNAFDEKEASTVQASMYSSKAVPINDASSAPGAIREVD 68
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
LA+WDTAGQERFHAL P+YYR ++GA++VYD+TD D+ KV+ W KEL ++G +I L
Sbjct: 69 LALWDTAGQERFHALAPMYYRNADGAIIVYDVTDADTLRKVRTWAKELYAVVGEGNIKLV 128
Query: 125 IAGNKIDLE-KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK D +R V + + A +GA HF SAK + + E+F ++ +++
Sbjct: 129 LCGNKADTPLTEREVSEGEGAAMAAELGASHFFASAKTGQNVAEVFSAMATQVV 182
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + I + IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++DSF++ K WVKEL K +I + +AGNK DL
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 148
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A++YA+ G + TSAK + ++FL +++++
Sbjct: 149 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 132/217 (60%), Gaps = 19/217 (8%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLA 67
N++ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ +
Sbjct: 12 NNARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKFE 71
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AG
Sbjct: 72 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAG 131
Query: 128 NKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEF 183
NK+DL + +R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 132 NKLDLVTEQQDKRVIQTADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKL------- 184
Query: 184 DLAKASELSRRGSMRRNVVVVEDEDL-PTSSSTKSGC 219
L +A + R R V DL P +++T+ G
Sbjct: 185 PLDQAGPRNPRSGPRPGV------DLRPEAANTQGGA 215
>gi|29841162|gb|AAP06175.1| similar to NM_002868 RAB5B, member RAS oncogene family in Homo
sapiens [Schistosoma japonicum]
Length = 214
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK--LNIAGKRLNLAIWDTAG 73
FK+V+LGE VGK+S+V+R + +F+E T+ A+F+ L + L IWDTAG
Sbjct: 8 FKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+H+L P+YYR + AV+VYD+T++DSF + K+WV EL K + +AGNK+DLE
Sbjct: 68 QERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNKVDLE 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM---LEKAQEFDLAKASE 190
QR V E+A++YA G + TSAK + E+F ++QR+ +E + +
Sbjct: 128 AQRVVSHEEAQEYANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEPPRSSGGSATQP 187
Query: 191 LSRRGSMRRNVVVVEDEDLPTS 212
+ + +R VVV + +PT+
Sbjct: 188 QNDSPAQQRQVVVRLETGVPTA 209
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|427786685|gb|JAA58794.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 231
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 107/166 (64%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKTS++ RY + KF T+ ASF ++N+ ++ + +WDTAGQER
Sbjct: 13 KVVLLGALGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQLWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A++ YDIT SFE +K WV EL++ + I L + GNK DL + R
Sbjct: 73 FRAMAPLYYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGNKCDLMQHR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +E AE+YA+ VGA SA N GI+EMF L+ R++E ++
Sbjct: 133 AVDREMAERYARDVGAYFSECSALSNEGIDEMFRHLALRIIESEEK 178
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V ++A+ YA G + TSAK + ++FL ++++ L K ++ A S RR
Sbjct: 141 RVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKK-LPKNEQSGSASTSGQGRR 198
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 GRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 129/209 (61%), Gaps = 19/209 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE YA+ G + F TSAK + + E+F +++++ L +A
Sbjct: 138 ENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL-------PLDQAGP 190
Query: 191 LSRRGSMRRNVVVVEDEDL-PTSSSTKSG 218
+ R + R V DL P + T+SG
Sbjct: 191 RNMRTAPRPGV------DLRPEAPGTQSG 213
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKQDLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V E+A+ YA G + TSAK + ++FL ++++ L K ++ AS RR
Sbjct: 142 RMVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKK-LPKNEQATAQGASGQGRR 199
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V ++A+ YA G + TSAK + ++FL ++++ L K ++ A S RR
Sbjct: 141 RVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKK-LPKNEQSGSASTSGQGRR 198
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 33 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 92
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 93 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 152
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ +R
Sbjct: 153 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRTRGV 211
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 212 DLHEQ-----------SQQNKSQCC 225
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E + +S CC
Sbjct: 197 ---RGVDLTE-----PAQPARSQCC 213
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 CRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|157128524|ref|XP_001661468.1| low-Mr GTP-binding protein Rab31, putative [Aedes aegypti]
gi|108872544|gb|EAT36769.1| AAEL011171-PA [Aedes aegypti]
Length = 242
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 120/166 (72%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LG VGKTS+V+RYV + + ++ T+ ASF K+N+ ++ + +WDTAGQER
Sbjct: 7 KIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +SF ++K+WV+EL++ + + L++ GNK+DLE++R
Sbjct: 67 FKAMAPLYYRNANAALLVFDLTQYNSFVEIKSWVQELQRNVQEPMVLSLVGNKLDLEEKR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +E+A YA S+G +F TSA ++GIE++F+ ++ +++ + E
Sbjct: 127 AVSREEAALYATSIGGNYFETSALQDQGIEQVFISIAVGLIKLSGE 172
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 107/159 (67%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+ LLG+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 14 ICLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 73
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
H+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R
Sbjct: 74 HSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 133
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 134 VPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 172
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 112/164 (68%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+ LLG+ VGK+S+VLR+V D FNE +T+ ASF++K L + + IWDTAGQE+
Sbjct: 10 KLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDTAGQEK 69
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ L P+YYR + A++VY+IT + SFE +K+WVKEL++ ++I L IAGNK DLE QR
Sbjct: 70 YRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSDLESQR 129
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
V ++A++YA S+ A+ TSA + +F LS+R+ +++
Sbjct: 130 QVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRLPQES 173
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + ++E+F +++++
Sbjct: 138 ESPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKL 183
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
SS SFK+VLLGE VGK+SV LR+V+D+F + +T+ A+FL + + G + L IW
Sbjct: 2 SSVASFKLVLLGESSVGKSSVALRFVKDQFEDYRESTIGAAFLTQTVRRQDGATIKLEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR ++ A++VYDIT+++SFE K+W++EL++ +I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNAHCALVVYDITEQESFENAKSWIRELQRHADANITIALVGNK 121
Query: 130 IDL-EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+DL E RTV ED +KYA S G + TSAK + E+F ++ ++
Sbjct: 122 LDLAETSRTVSAEDGQKYADSEGLMFMETSAKTPTNVTELFTLVANKL 169
>gi|118348926|ref|XP_001007936.1| Ras family protein [Tetrahymena thermophila]
gi|89289703|gb|EAR87691.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 836
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Query: 3 ANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG- 61
++ L++ S + K+V++GEG VGKTS++LR + ++++ +T+ A +L K + +
Sbjct: 198 SSQLNKMMSKGMNNKIVIVGEGRVGKTSLILRCCKGEYSDNQESTINAFYLEKTIQVNDT 257
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-ND 120
+ LN+ IWDTAGQERF ++ P+YY + A++VYDIT ++SF+KVK WV EL ++L +
Sbjct: 258 ENLNMYIWDTAGQERFKSITPMYYHDAVCAIIVYDITFKESFDKVKLWVTELTQILDTSK 317
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ + I GNK DLE R + ++ AE+Y+QSVGA HFHTSAK NRG++E+F + Q ++
Sbjct: 318 LIICIVGNKCDLENNRQISKQFAEEYSQSVGAHHFHTSAKNNRGVDELFQYIGQEKIQ 375
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIW 69
S+ +KVV++GE +RY + ++++K +T+ A L K++ + ++N+AIW
Sbjct: 2 SNDTKYKVVIIGE---------VRYCKGEYSDKQESTINAFCLQKQIQVNETDKVNIAIW 52
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGN 128
DTAGQE++ AL P++Y+ + A++VYDIT ++SF+KVK WV EL K L + I L IAGN
Sbjct: 53 DTAGQEKYKALAPMFYQEAVCAIIVYDITFKESFDKVKMWVTELTKTLDTSQIILCIAGN 112
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF 169
K DLEK R + + AE YA VGA HF TSAK N+GI E+F
Sbjct: 113 KCDLEKDRQIDKYFAESYAYQVGACHFMTSAKNNKGINELF 153
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + G + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDGTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR + A+ VYDIT S EK K+W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRSAACAICVYDITQSASLEKAKSWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
DL +R V QE+A+K+A+ G + TSAK G+ E+F ++ ++ E A
Sbjct: 122 SDLAARRQVSQEEAQKFAEEEGLMWCETSAKTGEGVNEIFDRIAHKLPEVA 172
>gi|328790844|ref|XP_003251474.1| PREDICTED: ras-related protein Rab-5B-like [Apis mellifera]
Length = 221
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE--FDLAKASELSR 193
R V ++A+ YA G + TSAK + ++FL + + +L QE + KA + +
Sbjct: 141 RIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIGKIILMNNQEVQVQVVKAVDWLK 200
Query: 194 RGSMRRNVVVVEDEDLPTSS 213
+ R+ + +V D P S
Sbjct: 201 QKDKRQQLAIVA-SDYPNLS 219
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAVDHQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 16/210 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE YA+ G + F TSAK + + E+F +++++ L +A
Sbjct: 138 ENPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-------PLDQAGP 190
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R + R V D TS + +G C
Sbjct: 191 RNLRTTPRPGV----DLRPETSGTQGAGAC 216
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 115/173 (66%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++ + FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + + + + IW
Sbjct: 10 NARVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFEIW 69
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR ++ A++VYDIT+ DSF K+WVKEL++ ++ + +AGNK
Sbjct: 70 DTAGQERYRSLAPMYYRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNK 129
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
DLE +R V E+A YAQ G +H TSAK ++ +F+E+++ + + A +
Sbjct: 130 ADLETRRAVEFEEANAYAQENGILHLETSAKNANNVKSLFIEIAKTLPKNAPQ 182
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVA 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V DAE YA+ G + F TSAK ++E+F +++++
Sbjct: 139 EQPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+R + S KS CC
Sbjct: 194 GRTRGVDLHEQ-----------SQQNKSQCC 213
>gi|281200509|gb|EFA74727.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 204
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 111/171 (64%), Gaps = 14/171 (8%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGKT++ +RY E F + ++T+ ASFL K + + R+ IWDTAGQ+RF +L P+YY
Sbjct: 14 VGKTAIAIRYSEGVFPTRPLSTVGASFLTKNIYVDNSRIKFQIWDTAGQDRFRSLAPMYY 73
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKK--------------MLGNDICLTIAGNKID 131
R + AVLVYD+T SFEKVK WV+ELK L I L + GNKID
Sbjct: 74 RGACVAVLVYDVTVPLSFEKVKLWVEELKTNIQEEIRCMLLTVIHLRYSIVLIVCGNKID 133
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
L ++R V +E A +YA +GAV+F TSAK N GI++MFLE+++++L+K +
Sbjct: 134 LVEKRQVSREIALQYAGEIGAVYFETSAKNNEGIDQMFLEIAKKLLQKHHQ 184
>gi|170037970|ref|XP_001846827.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
gi|167881359|gb|EDS44742.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
Length = 240
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 118/166 (71%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LG VGKTS+V+RYV + + ++ T+ ASF K+N+ ++ + +WDTAGQER
Sbjct: 7 KIVVLGSQGVGKTSLVVRYVSNVYTKEVSPTIGASFFTCKVNLEDFKVKMQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +SF ++K WV+EL++ + + L++ GNK+DLE +R
Sbjct: 67 FKAMAPLYYRNANAALLVFDLTQYNSFVEIKTWVQELQRNVQEPMVLSLVGNKLDLEAKR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +E+A YA S+G +F TSA ++GIE++F+ ++ +++ + E
Sbjct: 127 AVSREEAALYATSIGGNYFETSALQDQGIEQVFISIAVGLIKMSGE 172
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLG--- 190
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
G+ RN V E S KS CC
Sbjct: 191 -----GAAGRNRGVDLHEQ---SQQNKSQCC 213
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 107/166 (64%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S+ KV LLG+ VGK+S++ R+VED F+ T+ ASF+ K + + IWD
Sbjct: 2 SALRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAG ERF AL P+YYR S A++VYDIT E++F +KNWV+EL++ I + IAGNK
Sbjct: 62 TAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKC 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 122 DLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 167
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 82
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 83 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 142
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 143 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 54 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 113
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 114 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 173
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 174 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 214
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 111/166 (66%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ VGK+S+VLR+V + F +T+ ASF++K + + + IWDTAGQE+
Sbjct: 12 KVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEK 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT + S +KNWVKELK++ +I + IAGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V A+ YA +GA+ TSAK + + ++F+ +S+++ A E
Sbjct: 132 EVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAE 177
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 138 ENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V E+A+ YA G + TSAK + ++FL ++++ L K ++ A S RR
Sbjct: 141 RVVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKK-LPKNEQSGSASTSGQGRR 198
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + ++E+F +++++
Sbjct: 138 EHPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKL 183
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 106/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT ++F ++NWV+EL++ + + + IAGNK DL
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKAETFSTLENWVRELRQHGPHSMVVAIAGNKCDLTDV 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 5/188 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM--LEKAQEFDLAKASELSR 193
R V ++A+++A+S+ A+ TSA+ +EE+F ++S+++ LE + E D + +L+R
Sbjct: 126 REVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLENS-EVDSNDSFKLTR 184
Query: 194 R--GSMRR 199
+ S RR
Sbjct: 185 QPAPSTRR 192
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ ++F + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADLSSK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ ++++ L K + +
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---------LPKNEPQNAQS 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ RN V E+ P S +S CC
Sbjct: 193 TTGRNRGVDLQENNPPS---RSQCC 214
>gi|47229414|emb|CAF99402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 26/219 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASK 141
Query: 136 RTV--------------MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
R V ++DA+ YA + TSAK + + E+F+ +++R
Sbjct: 142 RAVDFQVSADELLLGQKTEQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKR------ 195
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L K+ + GS RN V E + K+ CC
Sbjct: 196 ---LPKSEPQAAGGSSVRNRGVDLTE---AAQPAKASCC 228
>gi|355562999|gb|EHH19561.1| Ras-related protein Rab-22A, partial [Macaca mulatta]
gi|355784359|gb|EHH65210.1| Ras-related protein Rab-22A, partial [Macaca fascicularis]
Length = 188
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
+++L + VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQER
Sbjct: 1 RLILFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 60
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F AL P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R
Sbjct: 61 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 120
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 121 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 160
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 115/174 (66%), Gaps = 5/174 (2%)
Query: 8 RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNL 66
R ++ FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ +
Sbjct: 10 RGNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKF 69
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +A
Sbjct: 70 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALA 129
Query: 127 GNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
GNK+DL +R V DAE YA+ G + F TSAK ++E+F +++++
Sbjct: 130 GNKLDLVADNPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKL 183
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 24 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 83
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 84 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 143
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 144 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 184
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + WVKEL++ I + +AGNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQDTFMRATTWVKELQRQASPSIVIALAGNKADLGNK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA G + TSAK + ++FL +++++ + Q A S G
Sbjct: 140 RVVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQ------AGNASTSG 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RR +VE E ++ CC
Sbjct: 194 QGRR---LVESEGQKPATGN---CC 212
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 4 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 63
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 64 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 123
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 124 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 164
>gi|363730697|ref|XP_428301.3| PREDICTED: ras-related protein Rab-31 [Gallus gallus]
Length = 226
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 48 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 107
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 108 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAKE 167
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +SQ++
Sbjct: 168 YAESIGAIVVETSAKNAVNIEELFQGISQQI 198
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ DI + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 140 EQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ KVV LGE VGK+S+VLR+V D F E T+ A+FL K+ G + IWDTAGQ
Sbjct: 12 TIKVVFLGESAVGKSSIVLRFVSDDFTESREPTIGAAFLTKRTTRDGNTIKFEIWDTAGQ 71
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID-LE 133
ERF L P+YYR + AV+V+DIT+E SF K ++WVKEL + GNDI + + NK+D L
Sbjct: 72 ERFAPLAPMYYRNAQAAVVVFDITNEHSFHKAEDWVKELHEKAGNDIVIALVANKMDLLN 131
Query: 134 KQRTVM-----QEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
Q T++ +E+ + + Q G ++F SAK I E+F + +++ Q
Sbjct: 132 VQGTILDEAVNEEEVDSFCQREGLLYFKASAKTGENIHEIFQTVGEKIPYSKQS------ 185
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
RRGS ++ + +D+ + S+T G TG
Sbjct: 186 ---PRRGS-DHDLTITDDQRIDLQSTTVEGTKETG 216
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 23 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 82
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK D+ +
Sbjct: 83 RYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADIANK 142
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 143 RAVEHQEAQTYADENSLLFMETSAKTAINVNEIFMAIAKKL 183
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + EDA YA+ G + F TSAK + + E+F +++++
Sbjct: 139 EQPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|157868924|ref|XP_001683014.1| putative small GTPase [Leishmania major strain Friedlin]
gi|68223897|emb|CAJ04282.1| putative small GTPase [Leishmania major strain Friedlin]
Length = 288
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 113/173 (65%), Gaps = 11/173 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK---LNIAG------KRLN 65
SFKVVLLGEG VGKTS++ RYV + F+EK +T+QAS + K +N A + ++
Sbjct: 9 SFKVVLLGEGRVGKTSLISRYVHNAFDEKEASTVQASMHSSKAVPINDASSAPGAIREVD 68
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
LA+WDTAGQERFHAL P+YYR ++GA++VYD+TD D+ KV+ W KEL ++G I L
Sbjct: 69 LALWDTAGQERFHALAPMYYRNADGAIIVYDVTDADTLRKVRTWAKELYAVVGEGKIQLV 128
Query: 125 IAGNKIDLE-KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK D +R V + + A +GA HF SAK + + E+F ++ ++
Sbjct: 129 LCGNKADTPLAEREVSEGEGAAMAAELGASHFFASAKTGQNVAEVFSAMATQV 181
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 129/211 (61%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR ++ A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAHAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGA- 192
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V + ++ S KS CC
Sbjct: 193 ------ACRSQGVDLHEQ----SQQNKSQCC 213
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 128 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 168
>gi|269861848|ref|XP_002650604.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
gi|220065897|gb|EED43454.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
Length = 191
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M LD + TY+FK+V+LG VGK+S+VL +++++FN +T+ A+FL K + I G
Sbjct: 1 MTPGLDLD---TYTFKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAAFLTKTVFIDG 57
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+++L P+YYR +N A++VYDIT +SFE+ K W+++LK ++
Sbjct: 58 TAVKFEIWDTAGQERYYSLIPMYYRGANAALVVYDITSAESFERAKRWIEDLKTEKPDNF 117
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ GNK+DL + + +E ++YA+ G + + TSAK GI+++FLEL+ +L K Q
Sbjct: 118 MKVLIGNKVDLSEAAVITEEMGKQYAEQEGLLFYQTSAKTGEGIKDLFLELAT-ILPKDQ 176
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K+ S G
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK---------LPKSEPQSTSG 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R+ V E + KS CC
Sbjct: 192 AAGRSRGVDLHEQ---TQQNKSQCC 213
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|125951222|ref|XP_697248.2| PREDICTED: ras-related protein Rab-31-like [Danio rerio]
Length = 194
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+++A+S+ A+ TSA+ IEE+F ++S+++
Sbjct: 126 REVPTKEAKEFAESIAAIFMETSARNAVNIEELFQKISRQI 166
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+++A+S+ A+ TSA+ +EE+F ++S+++
Sbjct: 126 REVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQI 166
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 58 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 117
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 118 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAKE 177
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +SQ++
Sbjct: 178 YAESIGAIVVETSAKNAVNIEELFQGISQQI 208
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 138 DSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKL 183
>gi|158297331|ref|XP_317585.4| AGAP007901-PA [Anopheles gambiae str. PEST]
gi|157015144|gb|EAA43939.4| AGAP007901-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 106/159 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L I + IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 89
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI + DSF + K WVKEL++ +I + +AGNK DL
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 149
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
R V E+A++YA G + TSAK + ++FL + +
Sbjct: 150 RVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 188
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
F++VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ +L A+ SR
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGAAGRSRGV 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 200 DLHEQ-----------SQQNKSQCC 213
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYD+T++D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDVTNQDTFARAKTWVKELQRQASPNIVIALAGNKADLANK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A+ YA+ + TSAK + ++FL +++++
Sbjct: 140 RMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKL 180
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 126/205 (61%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++F++ K WVKEL++ +I + +AGNK DL ++
Sbjct: 80 RYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ + TSAK + E+FL ++++M + D + +R
Sbjct: 140 RMVEFEEAQAYAEDTSLLFMETSAKTAMNVNELFLAIAKKMPKS----DAQNPTHAAR-- 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + + P +SGCC
Sbjct: 194 --NRGVNLQGSDQQP-----RSGCC 211
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 127/204 (62%), Gaps = 12/204 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++ E+ K WVKEL++ +I + +AGNK DL ++
Sbjct: 82 RYHSLAPMYYRGAQAAIVVFDITKPETLERAKAWVKELQRQASPNIVIALAGNKADLAER 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ G + TSAK + ++FL ++++M K +
Sbjct: 142 RLVEFEEAQTYAEETGLLFMETSAKTAMNVNDLFLAIAKKM---------PKTDTQNPTH 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGC 219
++R V ++D P + ST++ C
Sbjct: 193 AVRHRGVNLQD---PDTHSTRACC 213
>gi|158295454|ref|XP_316217.3| AGAP006159-PA [Anopheles gambiae str. PEST]
gi|157016045|gb|EAA10814.3| AGAP006159-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 118/166 (71%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LG VGKTS+V+RYV + + ++ T+ ASF K+N+ ++ + +WDTAGQER
Sbjct: 7 KIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +SF ++K WV+EL++ + + L++ GNK+DLE +R
Sbjct: 67 FKAMAPLYYRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQEPMVLSLVGNKLDLEAKR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +E+A YA S+G +F TSA ++GIE++F+ ++ +++ + E
Sbjct: 127 AVSREEAMLYANSIGGNYFETSALHDQGIEQVFISIAVGLIKLSGE 172
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 138 DSPDKRAIQTVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|269866354|ref|XP_002652244.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
gi|220062888|gb|EED41812.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M LD + TY+FK+V+LG VGK+S+VL +++++FN +T+ A+FL K + I G
Sbjct: 1 MTPGLDLD---TYTFKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAAFLTKTVFIDG 57
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+++L P+YYR +N A++VYDIT +SFE+ K W+++LK ++
Sbjct: 58 TAVKFEIWDTAGQERYYSLIPMYYRGANAALVVYDITSAESFERAKRWIEDLKTEKPDNF 117
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ GNK+DL + + +E ++YA+ G + + TSAK GI+++FLEL+ +L K Q
Sbjct: 118 MKVLIGNKVDLSEAAVITEEMGKQYAEQEGLLFYQTSAKTGEGIKDLFLELA-TILPKDQ 176
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK--LNIAGKRLNLAIWDTAG 73
FK+V+LGE VGK+S+V+R + +F+E T+ A+F+ L + L IWDTAG
Sbjct: 8 FKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+H+L P+YYR + AV+VYD+T++DSF + K+WV EL K + +AGNK+DLE
Sbjct: 68 QERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNKVDLE 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
QR V E+A++YA G + TSAK + E+F ++QR+ + + A +L++
Sbjct: 128 AQRVVSHEEAQEYANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEPPRSSGAQQLTQ 187
Query: 194 RGS 196
S
Sbjct: 188 NDS 190
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 121/186 (65%), Gaps = 6/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYD+T+ D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDLTNPDTFSRAKTWVKELQRQASPNIVIALAGNKADLASK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML------EKAQEFDLAKAS 189
R V +A+ YA + TSAK + ++FL +++++ ++ Q ++A+++
Sbjct: 141 RAVETAEAQAYADENQLLFMETSAKTATNVNDIFLAIAKKLPKNDAANQQGQRLNVAQSA 200
Query: 190 ELSRRG 195
E ++ G
Sbjct: 201 ESNQSG 206
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 14/206 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ ++I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNMDTFVRAKNWVKELQRQASSNIVIALAGNKADLGSK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E F+ ++++ L K G
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNETFMAIAKK---------LPKNEPQCATG 192
Query: 196 SMRRNVVVVEDEDLPTSSSTKSG-CC 220
+ RN V DL SS G CC
Sbjct: 193 AAGRNRGV----DLQESSQPSKGQCC 214
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ + F + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA+ + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVDFQEAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 10/208 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 23 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 82
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK D+ +
Sbjct: 83 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADIANK 142
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + E+F+ +++++ + + + G
Sbjct: 143 RAVELQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQAGAGQG------G 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
R V + E P S S++ CC G
Sbjct: 197 RTRTGVDL--QEAAPQSRSSQ--CCGGG 220
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma variegatum]
Length = 179
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 107/158 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ I + +AGNK DL Q
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASQ 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
R V E+A+ Y++ G + TSAK ++FL ++
Sbjct: 142 RAVELEEAQAYSEEXGLLFMETSAKTAMKRHDIFLAIA 179
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L +
Sbjct: 135 ADLANKRMVDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGVA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 GRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVT 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + EDA YA+ G + F TSAK + + E+F +++++
Sbjct: 139 EQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVM 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 138 DSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L +
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGTA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 CRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|343427700|emb|CBQ71227.1| probable GTP-binding protein ypt5 [Sporisorium reilianum SRZ2]
Length = 221
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ A + IWDTAGQ
Sbjct: 13 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQ 72
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-E 133
ER+ +L P+YYR +N AV+VYDIT S +K K W++EL++ +I + +AGNK DL
Sbjct: 73 ERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAS 132
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQE 182
+R + E+AEKYAQ G + TSAK + + E+F +++++ LE+A +
Sbjct: 133 TRRAIPTEEAEKYAQEEGLLFLETSAKDSSNVSELFTMIARKLPLEQAAD 182
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL ++++ L K++ + A+ SR
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNPGGAAGRSRGV 199
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S KS CC
Sbjct: 200 DLHEQ-----------SQQNKSQCC 213
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 16/210 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 21 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 80
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 81 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVN 140
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ G + F TSAK ++++F +++++ L +A
Sbjct: 141 EQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKL-------PLDQAGP 193
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R R+ V + + T S SG C
Sbjct: 194 RHARPGQRQGVSLQPE----TPGSNVSGPC 219
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 111/169 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKT +++R+ ED FN +I+T+ F K +++ GK++ L +WDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+R V +E EK A+ G F TSAK + +EE FL L+ +L+K+ +
Sbjct: 127 AKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSK 175
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK ++E+F +++++
Sbjct: 138 ENPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKL 183
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 128/205 (62%), Gaps = 11/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 33 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 92
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + K WVKEL++ +I + +AGNK DL +
Sbjct: 93 RYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKVWVKELQRQASPNIVIALAGNKADLAAK 152
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA+ G + TSAK + ++FL +++++ + + +S RR
Sbjct: 153 RAVEFDEAKGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNDGAGGVGGSSGQGRR- 211
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R ED + P SS CC
Sbjct: 212 -LDR----AEDGNKPASS-----CC 226
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 17/207 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+V R+V+D FN+ +T+ A+FL + +++ + + IWDTAGQ
Sbjct: 15 FKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGAAFLTQTIDLDSDTTVKFEIWDTAGQ 74
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L IYYR + A++VYDIT + S +K K W+KEL+K N+I + + GNK DLE+
Sbjct: 75 ERYRSLASIYYRNAQSALVVYDITQKASLDKAKYWIKELQKQASNNIVIALVGNKTDLEE 134
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDLAKASELSR 193
+R + E+A+ +A G + F SAK +GI++ F E++ +M +E+ L R
Sbjct: 135 ERQIPTEEAQAFANEAGLLFFEVSAKSGKGIKDCFREIALKMPIEET----------LKR 184
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R +R V DL ST C
Sbjct: 185 RRDRKRGTV-----DLNKRPSTNEQQC 206
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLSNK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA G + TSAK + ++FL +++++ + Q + S G
Sbjct: 141 RVVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQ------SGNASTSG 194
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
RR +VE E ++ CC
Sbjct: 195 QGRR---LVETEGQKAATGN---CC 213
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+S+ ++ K+VLLG+ VGK+ +V+R+ +++F E +T+ A+F+ + ++I + I
Sbjct: 21 HSNKIFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEI 80
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR ++ AV+VYDIT++ SFE K W+ ELK + NDI + +AGN
Sbjct: 81 WDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGN 140
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQE 182
K DLEK R V +E AE +A S + TSAK + + E+FL +++++ L+K Q+
Sbjct: 141 KKDLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLQKEQD 195
>gi|291190727|ref|NP_001167048.1| Ras-related protein Rab-31 [Salmo salar]
gi|223647850|gb|ACN10683.1| Ras-related protein Rab-31 [Salmo salar]
Length = 194
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S+V R+V+D F+ T+ ASFL K + + IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH+L P+YYR S AV+VYDIT DSF+ +K WVKELK+ DI + IAGNK DL
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDI 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-------LEKAQEFDLAKA 188
R V ++A+ +A+S+ A+ TSA+ +EE+F ++S+++ LE + F + +
Sbjct: 126 REVPMKEAKDFAESIAAIFMETSARNAVNVEELFQKISKQIPPLENPDLESNESFKIIRQ 185
Query: 189 SELSRR 194
S +
Sbjct: 186 PPPSNK 191
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + IWDTAG
Sbjct: 20 HQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICDDDLTVKFEIWDTAG 79
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+H+L P+YYR + A++VYDI + D+F K K+WVKEL++ +I + +AGNK DL
Sbjct: 80 QERYHSLAPMYYRGAQAAIVVYDIQNMDTFGKAKSWVKELQRHASPNIVIALAGNKADLS 139
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R V ++A+ YAQ G + TSAK + E+FL ++++ L K ++ A S R
Sbjct: 140 DKRMVETDEAQAYAQDHGLLFMETSAKTAMNVNEIFLAIAKK-LPKNEQAGGAGTSGQGR 198
Query: 194 R 194
R
Sbjct: 199 R 199
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 127/205 (61%), Gaps = 10/205 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 79
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ +I + +AGNK DL +
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQETFGRAKTWVKELQRQASPNIVIALAGNKADLANK 139
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA+ + TSAK + ++FL +++++ + D +RG
Sbjct: 140 RMVEFEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKN----DQVGGPTSGQRG 195
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R V + E ++ + GCC
Sbjct: 196 T-NRGVDLTE-----SNQQSSGGCC 214
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ ++ +
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNMGGTA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 GRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|312376181|gb|EFR23347.1| hypothetical protein AND_13023 [Anopheles darlingi]
Length = 183
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 106/159 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L I + IWDTAGQE
Sbjct: 25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI + DS+ + K WVKEL++ +I + +AGNK DL
Sbjct: 85 RYHSLAPMYYRGAQAAIVVYDIQNSDSYARAKTWVKELQRQASPNIVIALAGNKADLANS 144
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
R V E+A++YA G + TSAK + ++FL + +
Sbjct: 145 RVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 183
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+VL + VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 66 LVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 125
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
H+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R
Sbjct: 126 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 185
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 186 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 224
>gi|159477721|ref|XP_001696957.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274869|gb|EDP00649.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 20/206 (9%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA--IWDTAGQ 74
K+VLLGE GK+S+VLRYV+ +F + +T+ A+FL K L LN+ IWDTAGQ
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTL----PELNVKFEIWDTAGQ 70
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+H+L P+YYR + A++VYDIT DSF + K+WV+EL++ ++ + +AGNK DLE
Sbjct: 71 ERYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPNMIMALAGNKADLEG 130
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR V E+A+ YA G + TSAK + + E+F E+++++ + +A+ +
Sbjct: 131 QRAVTVEEAQAYAAENGLFYVETSAKTSANVNELFEEIARKLPKP-------EAAPRPPQ 183
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
G +V+ E++ KS CC
Sbjct: 184 G----GIVLSENQQ---QQPKKSTCC 202
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++N+ + IW
Sbjct: 2 NSALTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL++ DI + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELREQASKDIIIALVGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+D+ + +R V E+AE A G + F TSAK + E+FL + Q++
Sbjct: 122 LDMVETGAERKVALEEAENLASQEGLLFFETSAKTGSNVNEVFLAIGQKI 171
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 110/163 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + +N+ + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + K+WVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNNDTFVRAKSWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
R V E+A YA+ + TSAK + ++FL +++ E
Sbjct: 142 RMVDFEEAHVYAEENSLLFMETSAKTAMNVNDIFLAIAKSYQE 184
>gi|431896339|gb|ELK05755.1| Ras-related protein Rab-31 [Pteropus alecto]
Length = 215
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 109/162 (67%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S+++ L+ + VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQ
Sbjct: 26 SWRMALILDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 85
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFH+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL
Sbjct: 86 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSD 145
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 146 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 187
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK ++E+F +++++
Sbjct: 139 EQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ + A+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNPGGAA 193
Query: 190 ELSR 193
SR
Sbjct: 194 GRSR 197
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 123/205 (60%), Gaps = 17/205 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L I + IWDTAGQE
Sbjct: 25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI + DSF + K WVKEL++ +I + +AGNK DL
Sbjct: 85 RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A++YA + TSAK + ++FL +++++ + +
Sbjct: 145 RVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPK-------------NEGA 191
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++N+ ++E ++ SGCC
Sbjct: 192 GPQQNIRPTQNE----TNRQNSGCC 212
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++D+F + + WVKEL++ I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V ++A+ YA G + TSAK + ++FL ++++ L K ++ A S RR
Sbjct: 141 RIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKK-LPKNEQSGSASTSGQGRR 198
>gi|440901603|gb|ELR52512.1| Ras-related protein Rab-31, partial [Bos grunniens mutus]
Length = 197
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
+VL + VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 11 LVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 70
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
H+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R
Sbjct: 71 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 130
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 131 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 169
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 18/205 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + L + + IWDTAGQE
Sbjct: 26 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQPLRVEDTAVKFEIWDTAGQE 85
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDI ++D+F + KNWVKEL K I + +AGNK DL +
Sbjct: 86 RYHSLAPMYYRGAQAAIVVYDIPNQDTFGRAKNWVKELHKQASPPIVIALAGNKADLANK 145
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A++YA + TSAK + ++FL +++++ + + A+E R G
Sbjct: 146 RVVEFEEAQQYADENRLLIMETSAKTM--VNDIFLAIAKKLPKSEAK---GGAAEEHRVG 200
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
+ +PT SGCC
Sbjct: 201 A------------VPTQQRA-SGCC 212
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFVRAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V E+A+ YA + TSAK + ++FL ++++ L K++ +L +
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK-LPKSEPQNLGGTA 193
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SR + S KS CC
Sbjct: 194 CRSRGVDLHEQ-----------SQQNKSQCC 213
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 115/168 (68%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS+ ++ K+VLLG+ VGK+ +V+R+ +++F E +T+ A+F+ + ++I + I
Sbjct: 21 NSTKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEI 80
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR ++ AV+VYDIT++ SFE K W+ ELK + NDI + +AGN
Sbjct: 81 WDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGN 140
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DLE+ R V +E AE +A S + TSAK + + E+FL +++++
Sbjct: 141 KNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVN 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 139 EHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKL 184
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 124/210 (59%), Gaps = 16/210 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE YA+ G + F TSAK + E+F +++++ L +A
Sbjct: 140 EQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKL-------PLDQAGP 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R R V + + S++ +G C
Sbjct: 193 RHARPGQRPGVSLAPE----NSNTNAAGPC 218
>gi|334325908|ref|XP_001370672.2| PREDICTED: ras-related protein Rab-31-like [Monodelphis domestica]
Length = 221
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 43 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 102
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 103 RGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAKE 162
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GAV TSAK IEE+F +S+++
Sbjct: 163 YAESIGAVVVETSAKCAINIEELFQGISRQI 193
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLA 67
N++ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ +
Sbjct: 13 NNNRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKFE 72
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AG
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALAG 132
Query: 128 NKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
NK+DL +R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 133 NKLDLVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKL 185
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 115/168 (68%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS+ ++ K+VLLG+ VGK+ +V+R+ +++F E +T+ A+F+ + ++I + I
Sbjct: 21 NSTKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEI 80
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR ++ AV+VYDIT++ SFE K W+ ELK + NDI + +AGN
Sbjct: 81 WDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGN 140
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DLE+ R V +E AE +A S + TSAK + + E+FL +++++
Sbjct: 141 KNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
gi|46098290|gb|EAK83523.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
Length = 221
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ A + IWDTAGQ
Sbjct: 13 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQ 72
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-E 133
ER+ +L P+YYR +N AV+VYDIT S +K K W++EL++ +I + +AGNK DL
Sbjct: 73 ERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAS 132
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQE 182
+R + E+AEKYAQ G + TSAK + + E+F +++++ E+A E
Sbjct: 133 TRRAIPTEEAEKYAQEEGLLFLETSAKNSSNVSELFTMIARKLPTEQAAE 182
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 109/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNKADVANK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++N+A + IW
Sbjct: 2 NSNVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIVIALVGNK 121
Query: 130 IDL---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+DL E+ R V +E+AEK +Q + F TSAK + E+FL + +++
Sbjct: 122 MDLLESEEDRKVAKEEAEKLSQEENLLFFETSAKTGDNVNEVFLAIGEKI 171
>gi|440791435|gb|ELR12673.1| Ras subfamily Rab protein [Acanthamoeba castellanii str. Neff]
Length = 256
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS + KVVLLG GKTS+V RYV + F+ TT+ A F NK++ + ++ L I
Sbjct: 18 NSETAIEAKVVLLG---TGKTSLVQRYVNEDFDNTVTTTVGAGFANKRIVMDDVKIKLQI 74
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND-----ICL 123
WDTAGQERF ++ P+YYR + AVLVYDIT SF VK W+KEL + D + +
Sbjct: 75 WDTAGQERFRSMAPMYYRGAVAAVLVYDITSVSSFHAVKGWIKELNEAAMQDGDLRRMAI 134
Query: 124 TIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
IAGNK DLE R V +DA YA S+GA + TSA N G++++F+ L +R+L
Sbjct: 135 GIAGNKKDLEADREVSTKDATAYADSIGAFYIETSALANEGLDDLFMGLCRRIL 188
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|346464805|gb|AEO32247.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 103/162 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKTS++ RY + KF T+ ASF ++N+ R+ + +WDTAGQER
Sbjct: 13 KVVLLGALGVGKTSIITRYSQKKFLGATSPTIGASFTTLRVNVGNDRVKIQLWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+L YDIT S+E +K W EL++ + I L + GNK DL + R
Sbjct: 73 FRAMAPLYYRKANAAILAYDITSSSSYEAMKQWAIELRRNVEEAIVLVLVGNKCDLTQHR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V + A+KYA+ +G F SA N GI+EMF L+ +++E
Sbjct: 133 VVDKAVAQKYARDIGGHFFECSALSNEGIDEMFCHLALQIVE 174
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 112/168 (66%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
++S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + I
Sbjct: 2 SASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGN
Sbjct: 62 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DL +R V E+A+ YA + TSAK + ++FL +++++
Sbjct: 122 KADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 169
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 111/163 (68%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S+TY +K+VLLGE VGK+ + R+ +D F + +T+ A+F+ K +N+ + IWD
Sbjct: 43 SATYQYKLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWD 102
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQER+ +L P+YYR ++ A++VYDIT D+FE+ ++W+ ELK + D+ + +AGNK+
Sbjct: 103 TAGQERYRSLAPMYYRGASAALIVYDITSADTFEQARSWINELKAVSRADVIIALAGNKV 162
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
DLE+ R+V E A+ +A+ + TSAK ++EMF++++
Sbjct: 163 DLERNRSVDIETAQNFAKLNNCLFMETSAKTGHNVQEMFMKIA 205
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLDLVM 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 138 DSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|440912506|gb|ELR62068.1| Ras-related protein Rab-22A, partial [Bos grunniens mutus]
Length = 182
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 101/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 4 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 63
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R VM+ DA+
Sbjct: 64 RGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKD 123
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ AV TSAK I E+F+E+S+R+
Sbjct: 124 YADSIHAVFVETSAKNAININELFIEISRRI 154
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 108/159 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+S+VLR+V+ +F+E TT+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT ++FE+ K WVKEL++ +I + +AGNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
R V E+A+ YA+ G + TSAK + E+FL + +
Sbjct: 141 RLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIGK 179
>gi|281348435|gb|EFB24019.1| hypothetical protein PANDA_003579 [Ailuropoda melanoleuca]
Length = 185
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%)
Query: 20 LLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHA 79
L + VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF A
Sbjct: 1 LFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 60
Query: 80 LGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVM 139
L P+YYR S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R VM
Sbjct: 61 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVM 120
Query: 140 QEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 121 ERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 157
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 7 FKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 6/182 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG VGKTS+VLRYV+D F + +T+ ASF KL + G R+ L +WDTAGQER
Sbjct: 4 KIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQLWDTAGQER 63
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR S+ A++VYD+T S ++VK W+ EL++ + I NK+DL K
Sbjct: 64 FRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVDLLKDD 123
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL------SQRMLEKAQEFDLAKASE 190
+ E YA+ A+ F TSAK GI E F+ + S+R+ A + D K ++
Sbjct: 124 AHLVEKGRSYAKQTNAIFFETSAKTGAGINEAFMAVVRELISSKRLTPAADQADAIKLAQ 183
Query: 191 LS 192
+S
Sbjct: 184 VS 185
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++V+DIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLTNK 141
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 142 RNVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 126/205 (61%), Gaps = 13/205 (6%)
Query: 1 MMANSLDRNSSSTYS-FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
M A R + ++ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + +
Sbjct: 1 MAARQSARPGGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIAL 60
Query: 60 AGKR-LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+ + IWDTAGQER+ +L P+YYR +N AV+VYDIT S EK K WVKEL++
Sbjct: 61 DEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLEKAKAWVKELQRQAN 120
Query: 119 NDICLTIAGNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+I + +AGNK DL +R V DAE YA+ G + F TSAK ++E+F +++
Sbjct: 121 ENIIIALAGNKADLVAEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAK 180
Query: 175 RMLEKAQEFDLAKASELSRRGSMRR 199
++ + +A++ RG+ R
Sbjct: 181 KL-------PIEQATQRGMRGAAGR 198
>gi|410977346|ref|XP_003995067.1| PREDICTED: ras-related protein Rab-31 [Felis catus]
Length = 217
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 106/159 (66%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
++L + VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERF
Sbjct: 31 LILFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 90
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
H+L P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R
Sbjct: 91 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 150
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V +DA++YA+S+GAV TSAK IEE+F +S+++
Sbjct: 151 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 189
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 12/209 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ G + F TSAK + E+F +++++ L +
Sbjct: 140 EQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL-------PLDQVGP 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
R R V + E T ++ C
Sbjct: 193 RHARPGQRPGVNLTSSEGANTQTNGPCAC 221
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 113/166 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 16 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQE 75
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F++ ++WVKEL++ +I + +AGNK DL +
Sbjct: 76 RYHSLAPMYYRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKADLASK 135
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ V +A YA+ G + TSAK + E+F+ +++++ + Q
Sbjct: 136 QQVDTNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKLPKNTQ 181
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE+YA+ G + F TSAK + ++E+F +++++
Sbjct: 140 ESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKL 185
>gi|345328282|ref|XP_001510989.2| PREDICTED: ras-related protein Rab-22A-like [Ornithorhynchus
anatinus]
Length = 241
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 63 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 122
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R VM++DA+
Sbjct: 123 RGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMEKDAKD 182
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 183 YADSIHAIFVETSAKNAININELFIEISRRI 213
>gi|344237137|gb|EGV93240.1| Ras-related protein Rab-22A [Cricetulus griseus]
Length = 254
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 100/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 76 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 135
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL R VM+ DA+
Sbjct: 136 RGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKD 195
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 196 YADSIHAIFVETSAKNAININELFIEISRRI 226
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 80
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 81 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 140
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE+YA+ G + F TSAK + + E+F +++++
Sbjct: 141 ESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKL 186
>gi|50418070|gb|AAH77537.1| LOC445870 protein, partial [Xenopus laevis]
Length = 215
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 108/171 (63%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 38 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMYY 97
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R V++++A+
Sbjct: 98 RGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVLEKEAKD 157
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
YA S+ AV TSAK I E+F+E+S+R+ K +L R+ S
Sbjct: 158 YADSINAVFVETSAKNAININELFIEISKRIPSANAGATSGKGFKLKRQSS 208
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 124/210 (59%), Gaps = 16/210 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE YA+ G + F TSAK ++ +F +++++ L +A
Sbjct: 140 EQPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKL-------PLDQAGP 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R R V + + S++ SG C
Sbjct: 193 RHARPGQRPGVSLAPE----NSNTNVSGPC 218
>gi|291414854|ref|XP_002723671.1| PREDICTED: RAS-related protein RAB-22A, partial [Oryctolagus
cuniculus]
Length = 182
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 4 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 63
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWVKEL++ +I + IAGNK DL R VM+ DA+
Sbjct: 64 RGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKD 123
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 124 YADSIHAIFVETSAKNAININELFIEISRRI 154
>gi|354492620|ref|XP_003508445.1| PREDICTED: ras-related protein Rab-31-like [Cricetulus griseus]
Length = 203
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 104/155 (67%)
Query: 22 GEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALG 81
G+ VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L
Sbjct: 21 GDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 80
Query: 82 PIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQE 141
P+YYR S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +
Sbjct: 81 PMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLK 140
Query: 142 DAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DA++YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 141 DAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 175
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 140 EQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|395857349|ref|XP_003801059.1| PREDICTED: ras-related protein Rab-31 [Otolemur garnettii]
Length = 207
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 29 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 88
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 89 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 148
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +S+R+
Sbjct: 149 YAESIGALVVETSAKNAINIEELFQGISRRI 179
>gi|392578003|gb|EIW71131.1| hypothetical protein TREMEDRAFT_27089 [Tremella mesenterica DSM
1558]
Length = 198
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 112/169 (66%), Gaps = 4/169 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIW 69
S T S K+VLLGE VGK+S+VLR+V ++F++ +T+ A+FL + +++ + IW
Sbjct: 2 SRTTSSKLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQTVSLDENTSIKFEIW 60
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDIT--DEDSFEKVKNWVKELKKMLGNDICLTIAG 127
DTAGQER+ +L PIY+R SN AV+ YDIT E SFEK K WV+EL++ I + + G
Sbjct: 61 DTAGQERYKSLAPIYFRNSNAAVIAYDITQPPETSFEKAKMWVRELQRQADPSIVIMLVG 120
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
NK DLE QR +E EKYAQ G + SAK G+E +F+E+++++
Sbjct: 121 NKTDLENQRKTPREMGEKYAQEEGLLFAEASAKTGEGVEALFMEIARKL 169
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVN 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 140 EQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 68 RYHSLAPXYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F +++++
Sbjct: 128 RAVDFQEAQSYADDNSLLFXETSAKTSXNVNEIFXAIAKKL 168
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVN 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + E+F +++++
Sbjct: 140 EQPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDNTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNKLDLVT 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE+YA+ G + F TSAK + E+F +++++
Sbjct: 139 ENPDKRAIPAADAEQYAREAGLLFFETSAKTAENVRELFTAIAKKL 184
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 4/185 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++S S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++ I + IW
Sbjct: 2 NTSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDL 185
ID+ + +R V +E+ EK A+ G + F TSAK + +FL + +++ L+KA+E +
Sbjct: 122 IDVLQDGGERKVAKEEGEKLAEEKGLLFFETSAKTGENVNNVFLGIGEKIPLKKAEEQNN 181
Query: 186 AKASE 190
A E
Sbjct: 182 ANEGE 186
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 GYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|345490640|ref|XP_001602002.2| PREDICTED: ras-related protein RabJ-like [Nasonia vitripennis]
Length = 219
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 104/154 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKTS++ RY+ + FN ++ T+ ASF K+N+ R+ +WDTAGQER
Sbjct: 7 KVVLLGSQGVGKTSLINRYINNAFNHQNNPTIGASFFTCKINLEDVRIKFQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A LV+DIT +SF +K+WV EL++ + + L + GNK+DL ++R
Sbjct: 67 FRSMAPMYYRNANAAFLVFDITQYNSFTAIKSWVTELQRNVEEPMVLILVGNKVDLSEKR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFL 170
V E+ KYA+S+GA + SA + G+++ FL
Sbjct: 127 KVDSEECRKYAESIGATYHEISALTDEGVDQAFL 160
>gi|429327077|gb|AFZ78867.1| Ras-related protein [Coptotermes formosanus]
Length = 207
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 118/176 (67%), Gaps = 2/176 (1%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YS K++L+G+ VGKTS+++RY++DKF+ +++T+ F K L I G ++ + +WDTAG
Sbjct: 12 YSIKLILIGDSSVGKTSLIMRYIDDKFSPNNLSTIGVDFKTKYLEIDGHQVKVQVWDTAG 71
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE+F A+ YYR SNG ++V+D+T+ ++F +VK W++ + + + + + + GNK+DLE
Sbjct: 72 QEQFRAITRAYYRNSNGILIVFDLTNRETFNQVKVWLQSIHDVSVDAVDVILCGNKVDLE 131
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
R V +E+ E++A +F TS K+N GI EMF+EL+ R L + E + + S
Sbjct: 132 --RAVSREEVEEFASLSSVPYFETSCKLNTGINEMFMELATRALRRKIEGNRMRTS 185
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ A + IWDTAGQ
Sbjct: 12 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQ 71
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-E 133
ER+ +L P+YYR +N AV+VYDIT S +K K W++EL++ +I + +AGNK DL
Sbjct: 72 ERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAS 131
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQE 182
+R V E+AEKYAQ + TSAK + + E+F +++++ LE+A +
Sbjct: 132 TRRAVATEEAEKYAQEENLLFLETSAKDSSNVSELFTMIARKLPLEQAAD 181
>gi|443688646|gb|ELT91271.1| hypothetical protein CAPTEDRAFT_125280 [Capitella teleta]
Length = 161
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LG VGKTSVV+RYV + FN T+ ASF K+ + RL + +WDTAGQER
Sbjct: 7 KLVVLGSQGVGKTSVVVRYVSNTFNGHLSPTIGASFFTCKMMVDNYRLRIQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR SN A+LVYDIT +SF+ +K+WV+EL+K D+ + + GNK DLE QR
Sbjct: 67 FRAMAPMYYRKSNAAILVYDITSLESFDDMKSWVQELQKNTDGDLAMCVFGNKCDLEDQR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
V A ++A S+GA HF SA + G++
Sbjct: 127 EVDNNLALQFAASIGARHFQVSALSSEGLK 156
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 112/167 (67%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ +I + ++GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V E+A+ YA + TSAK + ++FL +++++
Sbjct: 135 ADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 109/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAG E
Sbjct: 6 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 66 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + E+F+ +++++
Sbjct: 126 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
>gi|354468755|ref|XP_003496817.1| PREDICTED: ras-related protein Rab-22A-like [Cricetulus griseus]
Length = 191
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 100/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 13 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 72
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL R VM+ DA+
Sbjct: 73 RGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKD 132
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 133 YADSIHAIFVETSAKNAININELFIEISRRI 163
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 120/191 (62%), Gaps = 11/191 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE+YA+ G + F TSAK ++E+F +++++ D A
Sbjct: 139 ESPDKRAISTADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKL-----PIDQAGPRN 193
Query: 191 LSRRGSMRRNV 201
L R G R+ V
Sbjct: 194 L-RPGQQRQGV 203
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+++F++ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDTAGQ 77
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + F TSAK + + E+F +++++
Sbjct: 138 ENPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKL 183
>gi|384252326|gb|EIE25802.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 199
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 120/204 (58%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F + +T+ A+FL K I K + IWDTAGQER
Sbjct: 11 KLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTK--TIPEKGVKFEIWDTAGQER 68
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + AV+V+DIT+ +SF K KNWVKEL++ ++ + +AGNK DL QR
Sbjct: 69 YHSLAPMYYRGAAAAVVVFDITNAESFAKAKNWVKELQRQGNPNMIMALAGNKADLAAQR 128
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V EDA+ YA + TSAK N + E+F ++++R+ A A+ G
Sbjct: 129 AVTSEDAKAYADENSLFFWETSAKTNVNVAEVFHDIAERLPR-------ASAAPQPPVGG 181
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
+ V E + KS CC
Sbjct: 182 ITLTETVPE-------RAKKSACC 198
>gi|256078263|ref|XP_002575416.1| rab5 [Schistosoma mansoni]
gi|353230409|emb|CCD76580.1| putative rab5 [Schistosoma mansoni]
Length = 198
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK--LNIAGKRLNLAIWDTA 72
S K+V+LGE VGK+S+VLR V+ +F+E T+ A++L + LN + IWDTA
Sbjct: 6 SHKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAAYLTQTIVLNDPPATVKFEIWDTA 65
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + AV+VYDIT+++SFE+ K+W+ EL++ + +AGNK+DL
Sbjct: 66 GQERYHSLAPMYYRGAQAAVVVYDITNQNSFERAKSWINELQEKANTSGVIALAGNKVDL 125
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
E QR V E+A++YA + TSAK++ + E+F +++ +L A+
Sbjct: 126 EGQRAVSFEEAQEYADKNRLLFMETSAKISTNVSELFTAIARELLSHAE 174
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F + +T+ A+FL + + + + IWDTAGQE
Sbjct: 14 FKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGAAFLTQTVCLDDVTVKFEIWDTAGQE 73
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + AV+VYDI D+F + + WVKEL++ DI + +AGNK DL +
Sbjct: 74 RYHSLAPMYYRGAQAAVVVYDIQCPDTFSRAQAWVKELRQQANQDIVIALAGNKADLAAK 133
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R + E+AE YA+ + TSAK + ++FL++++++ +K
Sbjct: 134 REIETEEAEVYAKENNLLFMETSAKTALNVNDLFLQIAKKLPKK 177
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + + + + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVQ 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DA+ YA+ G + F TSAK ++ +F E+++++
Sbjct: 140 EQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 111/161 (68%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAG E
Sbjct: 6 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 66 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ++A+ YA + TSAK + + E+F+ +++++
Sbjct: 126 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 166
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 110/162 (67%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+FK+VLLG+ VGK+S V R+V+++F E T+ A+FL + + + + IWDTAGQ
Sbjct: 8 NFKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAGQ 67
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR + A++VYDITD DSF+ K W++EL++ DI + +AGNK+DL
Sbjct: 68 ERYRSLAPMYYRGAAAALVVYDITDPDSFDGAKTWIQELQRQGAADIVIGLAGNKLDLSS 127
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
QR + ++A+ +A G + + TSAK ++E+F+ ++Q++
Sbjct: 128 QRKIDSKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKL 169
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 108/160 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+D+F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++V+D+T++ SFE+ K WV+EL+ ++ + +AGNK DL R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V EDA+ YAQ G TSAK ++E+F E+++R+
Sbjct: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 126/209 (60%), Gaps = 18/209 (8%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDT 71
T FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + + + G + IWDT
Sbjct: 6 TCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDT 65
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L P+YYR + A++VYD+T++DSF K+WVKEL++ ++ + +AGNK D
Sbjct: 66 AGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKAD 125
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
LE +R V E+A +YA+ +H TSAK ++++F+ +++R+ + + +
Sbjct: 126 LEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPE------- 178
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R + P +S +KSGCC
Sbjct: 179 -------REAFPITP---PQASKSKSGCC 197
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 123/210 (58%), Gaps = 16/210 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R + DAE YA+ G + F TSAK + +F +++++ L +A
Sbjct: 140 EQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKL-------PLDQAGP 192
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R R V + + S++ SG C
Sbjct: 193 RHARPGQRPGVSLAPE----NSNTNISGPC 218
>gi|145488631|ref|XP_001430319.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397416|emb|CAK62921.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ VGK+S+VLR+ D F H +TL A+F+ + + + G IWDTAGQE+
Sbjct: 6 KVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEK 65
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR + A++VYDIT +DSF+ +K+WV ELK I + GNK DL +
Sbjct: 66 YKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIEDE 125
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML-EKAQEFDLAKASELSRRG 195
V ++A YAQ +GA TS K N+GI+E+F+ +++++L E+ + K +E +
Sbjct: 126 KVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKTEKPQNP 185
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S++ V VED++ + GCC
Sbjct: 186 SVK---VTVEDQN--KKKKKEGGCC 205
>gi|332225969|ref|XP_003262160.1| PREDICTED: uncharacterized protein LOC100594346 [Nomascus
leucogenys]
Length = 411
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 233 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 292
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 293 RGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 352
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 353 YAESIGAIVVETSAKNAINIEELFQGISRQI 383
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+++ ++ K+VLLG+ VGK+ +V+R+ +++F E +T+ A+F+ + ++I + I
Sbjct: 21 HANKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEI 80
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR ++ AV+VYDIT++ SFE K W+ ELK + NDI + +AGN
Sbjct: 81 WDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGN 140
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
K DLEK R V +E AE +A S + TSAK + + E+FL +++++ +E D
Sbjct: 141 KKDLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKEQD 196
>gi|281339724|gb|EFB15308.1| hypothetical protein PANDA_010679 [Ailuropoda melanoleuca]
Length = 185
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 7 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 66
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 67 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 126
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GAV TSAK IEE+F +S+++
Sbjct: 127 YAESIGAVVVETSAKNAINIEELFQGISRQI 157
>gi|410953504|ref|XP_003983410.1| PREDICTED: ras-related protein Rab-22A [Felis catus]
Length = 226
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 101/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+VED F+ T+ ASF+ K + + IWDTAGQERF AL P+YY
Sbjct: 48 VGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYY 107
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S A++VYDIT E++F +KNWV+EL++ +I + IAGNK DL R VM+ DA+
Sbjct: 108 RGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKD 167
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 168 YADSIHAIFVETSAKNAININELFIEISRRI 198
>gi|301772696|ref|XP_002921772.1| PREDICTED: ras-related protein Rab-31-like [Ailuropoda melanoleuca]
Length = 197
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 19 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 78
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 79 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 138
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GAV TSAK IEE+F +S+++
Sbjct: 139 YAESIGAVVVETSAKNAINIEELFQGISRQI 169
>gi|223994599|ref|XP_002286983.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220978298|gb|EED96624.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 124/197 (62%), Gaps = 13/197 (6%)
Query: 5 SLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA---- 60
S D + + S KVVLLGE VGK+S+ LR+V +KF T+ ASF+ KK + +
Sbjct: 3 STDGVAGNEQSVKVVLLGESGVGKSSLALRFVTEKFRPYSEATIGASFIPKKQSTSFGTQ 62
Query: 61 -GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
+ + IWDTAGQE++ +L P+YYR ++ A+LVYDIT+ SF +K+W ELK+ +
Sbjct: 63 QQRHIGFKIWDTAGQEKYRSLAPMYYRGASAAILVYDITNPSSFAALKDWASELKQNGPS 122
Query: 120 DICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM--L 177
D+ L + GNK+DL + R+V + E+YA +GA++ SAK +G+E MF ++++R+ L
Sbjct: 123 DLVLVVCGNKLDLIEYRSVGRSVGEEYAAGIGAMYVEASAKDGKGVENMFTDVARRVPPL 182
Query: 178 EKAQEF------DLAKA 188
E ++ DLAK+
Sbjct: 183 ENLDDYLEEDVLDLAKS 199
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 21/188 (11%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S K+VLLGE VGK+SVVLR+V++ F E T+ A+FL +K + K + IW
Sbjct: 4 SQKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + AV+VYDIT SFEK K+WVKEL++ ++ + + GNK
Sbjct: 64 DTAGQERFRSLAPMYYRNALSAVVVYDITSSSSFEKAKSWVKELQRQASPNVIIALVGNK 123
Query: 130 IDL---------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEM 168
+DL ++ R + +++A+ YA+ + F TSAK G+ E+
Sbjct: 124 LDLVEGSQEEEEEERDDATATPNQDQSRAISRDEAQAYAEESNLLFFETSAKTGEGVVEV 183
Query: 169 FLELSQRM 176
F E+++++
Sbjct: 184 FTEIAKKI 191
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 24/208 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + + + + IWDTAGQE
Sbjct: 75 FKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQE 134
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE-K 134
R+ +L P+YYR ++ A++VYDIT+ +SF+ K+WVKEL++ + + +AGNK DL
Sbjct: 135 RYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLAGT 194
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
+R V +DAE+YA+ G +HF TSAK + ++ +F+E+++R L KA
Sbjct: 195 RRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKR---------LPKA------ 239
Query: 195 GSMRRNVVVVEDEDLP--TSSSTKSGCC 220
V VE E P ++K CC
Sbjct: 240 ------VAPVEREAFPIVAPKASKRSCC 261
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 108/160 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+D+F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++V+D+T++ SFE+ K WV+EL+ ++ + +AGNK DL R
Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 133
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V EDA+ YAQ G TSAK ++E+F E+++R+
Sbjct: 134 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 173
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 111/169 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKT +++R+ ED FN +I+T+ F K + + GK++ L +WDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+R V +E EK A+ G F TSAK + +EE FL L++ +L+++ +
Sbjct: 127 AKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILKQSSK 175
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 109/172 (63%), Gaps = 5/172 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+V+R+V + F+E T+ A+FL +++NI + IW
Sbjct: 2 NSNVASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + +AGNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWVKELHEQASGDIVIALAGNK 121
Query: 130 IDL-----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+DL E +R V E+ +K A + F TSAK + E+FL + ++
Sbjct: 122 VDLIEENGENERKVATEEGQKLADEENLLFFETSAKTGYNVNEIFLAVGDKI 173
>gi|123449028|ref|XP_001313237.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736298|gb|AAX97478.1| small Rab GTPase RabF3 [Trichomonas vaginalis]
gi|121895113|gb|EAY00308.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 8/204 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VL+G GKTS+V +YV F ++T Q +F K++N K L+L IWDTAGQER
Sbjct: 5 KIVLVGAAHTGKTSIVNQYVFGSFTHHTVSTTQPAFCQKQVNYQEKDLSLEIWDTAGQER 64
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+HAL P++YR + ++V+D+TD DSF + + W+ ELK+ G+ I + IAGNK DL +R
Sbjct: 65 YHALSPLFYRDAEAGIVVFDLTDADSFTRAQKWINELKQARGDQIHIVIAGNKTDLIDKR 124
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V + DAE+ A A ++ TSAK +E +F + + ++E + A + S S
Sbjct: 125 VVAKGDAEELAAQFKAPYYETSAKTKENLEPLFNSICEHVVEL---INAAGPPKESPGKS 181
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
++ N V E+E + + GCC
Sbjct: 182 LKGN-VAFENE----KQNKEGGCC 200
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 109/167 (65%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V E+A+ YA + TSAK + ++FL + + +
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKNL 181
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 108/161 (67%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+ LLG+ VGK+S+V R+V D + E T+ ASF++K L + K IWDTAGQE
Sbjct: 6 IKLCLLGDSGVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQE 65
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
++ L P+YYR + A++VYDIT + SF KV++W++EL++ +I ++IAGNK DLE
Sbjct: 66 KYRGLAPMYYRGAAAAIVVYDITSQASFSKVRDWIRELRQHGPENIVISIAGNKCDLEDL 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R + + A +YA+ VGAV TSAK I+E+F+ +S+++
Sbjct: 126 REIPVKIAAEYAEEVGAVFTETSAKTAANIKELFIAISKKL 166
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 3/176 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++S S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++ I + IW
Sbjct: 2 NTSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
ID+ + +R V +E+ EK A+ G + F TSAK + ++FL + +++ K E
Sbjct: 122 IDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAE 177
>gi|393246972|gb|EJD54480.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 117/189 (61%), Gaps = 10/189 (5%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SRQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDQTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ A P+YYR +N AV+VYDIT S EK + W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKA--PMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPSIVIALCGNK 119
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V QE+A+KYA+ G + TSAK G+ ++F +++++ L
Sbjct: 120 SDLAARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKL-------PLTAPP 172
Query: 190 ELSRRGSMR 198
SR G R
Sbjct: 173 SASRGGQAR 181
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FKV+L+G+ GK+ +++R+ E+ F++ +I+T+ F K +N+ GK + + +WDTAGQE
Sbjct: 10 FKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQVWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR SNG +LVYD+T+ DSF+ + W+KE+ ++ D+C I GNK DL +
Sbjct: 70 RFRTITASYYRGSNGIILVYDVTNRDSFDHINYWMKEIDRLAAPDVCRLIVGNKSDLSDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V E+ + AQ G TSA N +EEMF +++ M +K
Sbjct: 130 RVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKK 173
>gi|327281988|ref|XP_003225727.1| PREDICTED: ras-related protein Rab-31-like [Anolis carolinensis]
Length = 196
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 18 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 77
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 78 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPTKDAKE 137
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+++GA+ TSAK IEE+F +S+++
Sbjct: 138 YAETIGAIVVETSAKNAINIEELFQGISRQI 168
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K VLLG+ GK+S+VLR+V+ +F E ++T+ A+F ++ L + + IWDTAGQER
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQVSTIGAAFFSQTLAVNDATVKFEIWDTAGQER 67
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 68 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 127
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 128 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 178
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 179 M---VLV----DRPAEGARAASCC 195
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 102/158 (64%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KV LLGE VGK+S+VLR+V D F +T+ ASF+ K+L + IWDTAGQE+
Sbjct: 7 KVCLLGESGVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR ++ A++VYDIT E ++ VK+WV+ELK+ D+ + IAGNK DL R
Sbjct: 67 YRSLAPMYYRGASAAIIVYDITREATYRTVKDWVRELKRNCTADMVIAIAGNKSDLNDLR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
V DAE+YAQS+GA+ TSA + +F + +
Sbjct: 127 EVRARDAEEYAQSIGALFIETSALSAVNVPHLFTAIGK 164
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 119/206 (57%), Gaps = 15/206 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K++L+G+ VGK+ ++LR+V+D FN ITT+ F + + I GK++ L IWDTAGQ
Sbjct: 14 TMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEINGKKVKLQIWDTAGQ 73
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF + YYR + G +LVYD+TDE SF V NW + L + D L + GNK D E+
Sbjct: 74 ERFRTITTAYYRGAMGIILVYDVTDERSFNSVHNWYQTLNQHANEDAQLFLVGNKCDDEE 133
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +E E+ A +G SAK N+ ++ +FLEL++R EK + +++
Sbjct: 134 SRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEKMRN---------TQQ 184
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
G + D+ +S+ TKS CC
Sbjct: 185 GPGSAGI------DVNSSNDTKSSCC 204
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 113/161 (70%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + +N+ + IWDTAGQE
Sbjct: 9 FKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ +L P+YYR + A++VYDIT+++SF K+WVKEL++ ++ + +AGNK DL+ +
Sbjct: 69 RYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A++Y++ G +H TSAK ++++F E+++++
Sbjct: 129 RRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKL 169
>gi|348557346|ref|XP_003464480.1| PREDICTED: ras-related protein Rab-31-like [Cavia porcellus]
Length = 201
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 22 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 81
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA+
Sbjct: 82 RGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKD 141
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 142 YAESIGAIVVETSAKNAINIEELFQGISRQI 172
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 6/187 (3%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T S K+VLLGE VGK+S+VLR+V ++F E T+ A+FL +K N + + IWDTA
Sbjct: 7 TTSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEIWDTA 66
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERF +L P+YYR + A++VYDIT SF K ++WV ELK I + + GNK DL
Sbjct: 67 GQERFASLAPMYYRNAQTALVVYDITKPQSFIKARHWVSELKSQASPGIIIALVGNKRDL 126
Query: 133 ----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE--KAQEFDLA 186
E R V +++ ++ A+ G + F TSAK ++++F+ ++Q++ E KA L
Sbjct: 127 VDDDESARKVAEDEGKQLAEEEGLLFFETSAKTGLNVKDVFMAIAQKIPEEQKAPSGGLR 186
Query: 187 KASELSR 193
A E SR
Sbjct: 187 GAEEDSR 193
>gi|345316408|ref|XP_001509078.2| PREDICTED: ras-related protein Rab-6A-like, partial
[Ornithorhynchus anatinus]
Length = 233
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
Query: 50 ASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNW 109
ASFL KKLNI GKR+NLAIWDTAGQERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNW
Sbjct: 130 ASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNW 189
Query: 110 VKELKKMLGNDICLTIAGNKI-DLEKQRTVMQEDAEKYAQS 149
VKEL+KMLGN+ICL I + I +L ++ M K Q+
Sbjct: 190 VKELRKMLGNEICLCIVYDVILNLTERDPFMNNRGAKVTQN 230
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 122/220 (55%), Gaps = 18/220 (8%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M AN D Y FKV+++G VGK+ ++LR+ ED F++ +I+T+ F +K+ +
Sbjct: 1 MTANDYD------YLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELD 54
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
GK + L IWDTAGQERF + YYR SNG V+VYDIT+ DSFE+V++W+ E+ D
Sbjct: 55 GKSIKLQIWDTAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQHWMSEIDNHASQD 114
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
+C + GNK DL R V E+ E A+ G TSAK + +E MF+ ++ M +
Sbjct: 115 VCRLLVGNKADL-PDRAVKTEEGEALARQFGIPFMETSAKESLNVENMFITMATSMKK-- 171
Query: 181 QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
K ++ GS V + S + KSGCC
Sbjct: 172 ------KVGGMAASGSSNGGQVTIAK---GQSVNQKSGCC 202
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGTRAASCC 199
>gi|116779293|gb|ABK21222.1| unknown [Picea sitchensis]
gi|116790907|gb|ABK25786.1| unknown [Picea sitchensis]
Length = 200
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F + +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGAAFFSQTLAVNEVTVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ DSF + KNWV EL+K ++ + +AGNK D+ +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFVRAKNWVLELQKQGNPNLVMALAGNKADVAAKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+AE YA+ G TSAK + + E+F E+++R L KA+ L+ R +
Sbjct: 132 KVEAEEAETYAKENGLFFMETSAKTAQNVNELFYEIARR-LPKARPVQQPAGMVLTDRPA 190
Query: 197 MR 198
R
Sbjct: 191 ER 192
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 109/164 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V E+A+ YA + TSAK + ++FL + + + K
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKTVWAK 184
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+ LR+V+ +F + +T+ A+FL + L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ DSF + K WV+EL++ ++ + +AGNK DL +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSSKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
+ E+ + YA+ G TSAK ++ + E+F E++ R L KAQ A+AS +S
Sbjct: 132 KIEAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIA-RKLPKAQP---AQASGMS---- 183
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
+ D KS CC
Sbjct: 184 -------LTDGSTSRLGPAKSTCC 200
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P S + CC
Sbjct: 183 M---VLV----DRPAEGSRAASCC 199
>gi|323456390|gb|EGB12257.1| hypothetical protein AURANDRAFT_70056 [Aureococcus anophagefferens]
Length = 221
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAI 68
S Y FK+VLLG+ VGKT +VLR++E +N + +T+ A FL KK+ A G + I
Sbjct: 5 SQKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQI 64
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELK-KMLGNDICLTIAG 127
WDTAGQERF A+ P+YYR + A++ +D+TDE +F +K+WV+ELK ++ ++ + IA
Sbjct: 65 WDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIAC 124
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE-KAQEF 183
NK DL+ R V + AE++A+S+ A+ TSAK N G+ E+F +S+ +++ + QE
Sbjct: 125 NKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQEL 180
>gi|397475954|ref|XP_003809378.1| PREDICTED: ras-related protein Rab-31 [Pan paniscus]
Length = 191
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 13 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 72
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 73 RGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 132
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 133 YAESIGAIVVETSAKNAINIEELFQGISRQI 163
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + +NI GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K AQ G F TSAK + + E F L++ +L K+
Sbjct: 129 RRVQKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLARDILLKS 173
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + + GNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALTGNKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D PT S + CC
Sbjct: 183 M---VLV----DRPTEGSRAASCC 199
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 114/186 (61%), Gaps = 11/186 (5%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++NI + IWDTAGQ
Sbjct: 7 SIKLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + + GNKID+
Sbjct: 67 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLD 126
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V +E+ EK AQ + F TSAK + E+FL++ + + L +A++
Sbjct: 127 EDPTERKVAREEGEKLAQEENLLFFETSAKTGANVNEVFLKIGENV-------PLKQAAD 179
Query: 191 LSRRGS 196
S GS
Sbjct: 180 GSNNGS 185
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 13/198 (6%)
Query: 8 RNSSSTYS-FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LN 65
R S + ++ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + +
Sbjct: 10 RPSGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVK 69
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +
Sbjct: 70 FEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIAL 129
Query: 126 AGNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
AGNK DL +R V DAE YA+ + F TSAK ++E+F +++++
Sbjct: 130 AGNKADLVAEQPDKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIAKKL----- 184
Query: 182 EFDLAKASELSRRGSMRR 199
+ +AS+ RG+ R
Sbjct: 185 --PIEQASQRGMRGAAGR 200
>gi|170084457|ref|XP_001873452.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651004|gb|EDR15244.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 173
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTI-AAFLTQTVTLDDQTTVKFEIW 60
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++ I + + GNK
Sbjct: 61 DTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNK 120
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V +E+A+KYA G + TSAK G+ E+F +++++
Sbjct: 121 SDLAARRQVTEEEAKKYADEEGLMWAETSAKTGEGVSEIFTAIAKKL 167
>gi|281206811|gb|EFA80995.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 122/208 (58%), Gaps = 17/208 (8%)
Query: 15 SFK--VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
SFK +VLLGE VGK+S+VLR+V F + +T+ A+FL + + + + IWDTA
Sbjct: 25 SFKDNLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTA 84
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H L P+YYR + A++VYDI +DSFE+ WVKEL++ +I + +AGNK+DL
Sbjct: 85 GQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKLDL 144
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
+R V +A+ YA+ G + TSAK + + E+F+E+++++ +
Sbjct: 145 AAKRKVETSEAQTYAEENGLLFMETSAKTAQNVNELFVEIAKKLPKTPN----------P 194
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R GS R + +++ + K CC
Sbjct: 195 RPGSGRLPISPIDN-----NPQKKKPCC 217
>gi|403265333|ref|XP_003924897.1| PREDICTED: ras-related protein Rab-31 [Saimiri boliviensis
boliviensis]
Length = 191
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGK+S+V R+V+D F+ T+ ASF+ K + + IWDTAGQERFH+L P+YY
Sbjct: 13 VGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYY 72
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R S AV+VYDIT +DSF +K WVKELK+ +I + IAGNK DL R V +DA++
Sbjct: 73 RGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKE 132
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
YA+S+GA+ TSAK IEE+F +S+++
Sbjct: 133 YAESIGAIVVETSAKNAINIEELFQGISRQI 163
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K++++GE CVGK+S+ LR+ ED F+ +H T+ F K + + G R+ LAIWDTAGQ
Sbjct: 11 SLKLLIIGESCVGKSSLQLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 70
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLE 133
ERF L P YYR GA+LVYD+T+ DSF V+NW+ EL +DI + GNK DLE
Sbjct: 71 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATIHDIVKMLVGNKCDLE 130
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
++R + +E+ +K A+ + SAK G++ F EL + +++ + ++ + + +S
Sbjct: 131 EKRVISKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEASSRNSVS 189
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 109/166 (65%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IWDTAGQ
Sbjct: 16 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 75
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ I + +AGNK+DL
Sbjct: 76 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANESIVIALAGNKLDLAT 135
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R + DAE YA+ G + TSAK ++E+F +++++
Sbjct: 136 ANPSKRAIETADAEAYAKEAGLLFLETSAKTAENVQELFTAIARKL 181
>gi|123508821|ref|XP_001329730.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736290|gb|AAX97474.1| small Rab GTPase RabE1 [Trichomonas vaginalis]
gi|121912777|gb|EAY17595.1| Ras family protein [Trichomonas vaginalis G3]
Length = 201
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S+KVVLLGEG VGK+S+ ++ + F+ + +T+ A+F K + GK +++ +WDTAGQ
Sbjct: 2 SYKVVLLGEGRVGKSSIGNKWQSNTFDPQRRSTIAAAFFQKTVICQGKNVDIQLWDTAGQ 61
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E +H+L PIYY+ + A+LVY + D SFE++ W EL G +I L IA NKID+
Sbjct: 62 EEYHSLAPIYYKDAQAALLVYSVIDSTSFERMMQWKNELVNTRGENIKLIIAANKIDMVS 121
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR + + +A VG F SAK GI+ +F L++ +LE Q K S R
Sbjct: 122 QRVITPQQGLDFANKVGCQIFEVSAKTGEGIDMLFQALAKTLLEIPQ-----KKSATHRS 176
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGC 219
G + V+ +++ ++ST GC
Sbjct: 177 GKVGLQVINGNNQEAEENNSTGCGC 201
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 108/160 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+D+F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++V+D+T++ SFE+ K WV+EL+ ++ + +AGNK DL R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V E+A+ YAQ G TSAK ++E+F E+++R+
Sbjct: 132 KVTAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 127/206 (61%), Gaps = 14/206 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIWDTAGQ 74
FK+VLLGE VGK+S+V R+V D F++ +T+ A+FL + + + + + IWDTAGQ
Sbjct: 14 FKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDERTTIKFEIWDTAGQ 73
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR +N A++ YDIT E S ++ K+W++EL+K DI + + GNK+DLE
Sbjct: 74 ERYKSLAPMYYRNANCALVAYDITQESSLDRAKSWIQELQKQASADIVVALVGNKLDLEA 133
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
+R V ++A++YA +G + SAK GI+++F ++ + L +L+
Sbjct: 134 ERKVSTKEAKEYADELGLIFKEISAKTGEGIKDVFHSIASK---------LPVEEKLNSA 184
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
RRN+ D + P++++ +S C
Sbjct: 185 TKRRRNI----DLNRPSTNNQESCSC 206
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 119/184 (64%), Gaps = 4/184 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+ LLG+ VGK+S+VLR+V D+F+ + T+ ASF++K +++ IWDTAGQE
Sbjct: 9 IKLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
++ +L P+YYR + A++VYD+T E++F+ VK WV+EL+++ + + IAGNK DL+ Q
Sbjct: 69 KYKSLAPMYYRGAAAAIVVYDLTVENTFKSVKTWVRELRELGPPGLVIAIAGNKSDLKDQ 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA----QEFDLAKASEL 191
R V E E YA +GAV SA ++ + +F E+++++ E++ Q FDL +
Sbjct: 129 REVSLEAGENYASEIGAVFAEVSALTSQNVAYIFQEITKKLPEESSQYIQNFDLKNQTIK 188
Query: 192 SRRG 195
S+ G
Sbjct: 189 SKGG 192
>gi|357521023|ref|XP_003630800.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355524822|gb|AET05276.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 190
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 106/158 (67%)
Query: 19 VLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFH 78
VLLG+ GKTS+VLR+V+ +F+E +T+ A+F + L++ + IWDTAGQER+H
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH 64
Query: 79 ALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTV 138
+L P+YYR S A++VYDIT DSF + K WV+E+++ ++ + + NK DLE QR V
Sbjct: 65 SLAPMYYRGSAAAIVVYDITSMDSFVRAKKWVREVQRQANPNLIMLLVANKADLEDQRKV 124
Query: 139 MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E+ E+YA+ G F TSAK + + E+F E+++R+
Sbjct: 125 GNEEGEEYAKENGMSFFETSAKTAQNVNELFYEIAKRL 162
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++S S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++ I + IW
Sbjct: 2 NTSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+D+ + +R V +E+ EK A+ G + F TSAK + ++FL + +++
Sbjct: 122 VDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 171
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 118/179 (65%), Gaps = 8/179 (4%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR---LN 65
N+++ FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + + +
Sbjct: 19 NTATMLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKLEKHPDVTIK 78
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLT 124
IWDTAGQER+ +L P+YYR +N A++VYD+T S K ++WV+ELK +G+ D+ +
Sbjct: 79 FEIWDTAGQERYKSLAPMYYRNANAALIVYDVTQPGSLVKAQSWVEELKNKVGDQDLVIC 138
Query: 125 IAGNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+AGNK+D+ R V +EDA+ YAQ G + + TSAK G+ +F E+ +R+ +K
Sbjct: 139 LAGNKVDICDEDATAREVQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGERVYQK 197
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + +++ + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK+DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V +AE YA+ G + F TSAK + ++F +++++
Sbjct: 140 EQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKL 185
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGTGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVVALAGNKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTPEEARVYAEDNGLFFMGTSAKTAANVNDVFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P S + CC
Sbjct: 183 M---VLV----DRPAEGSRAASCC 199
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K++L+G+ VGK+ +++R+V+DKFN ITT+ F K ++I GK+ L +WDTAGQER
Sbjct: 22 KILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKTKLQLWDTAGQER 81
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F + YYR + G +LVYD+TDE +F ++ W K + + +D L + GNK D++ R
Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIRQWFKTVNEHANDDAQLLLVGNKSDMD-TR 140
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
TV E E A+ +G +SAK + + E+F L++ + EK LA + R G+
Sbjct: 141 TVTYEQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQEKIDNDKLAGGANSGREGN 200
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
+ N S STKSGCC
Sbjct: 201 ININ---------SGSGSTKSGCC 215
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 24/216 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA---GKRLNLAIWDTA 72
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + +A + IWDTA
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLAEYDDTMIKFEIWDTA 63
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND---ICLTIAGNK 129
GQER+ +L P+YYR +N A++VYD+T EDS K ++WV ELK +G+D ICL GNK
Sbjct: 64 GQERYKSLAPMYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDDDLVICLV--GNK 121
Query: 130 IDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
+DL K + + ++DA+ YA+ G + SAK RG+ E+F + +R+ + ++ L
Sbjct: 122 VDLAEEDSKSKVIDEDDAKDYAEQHGLIFHEVSAKSGRGVIEVFQNIGERLYLQRKD-SL 180
Query: 186 AKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCL 221
A S+ ++R PT++ S CC+
Sbjct: 181 AAQSQQPSNIQLQR----------PTTNDATS-CCV 205
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/166 (42%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F+ +T+ A+FL + + + + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +AGNK+DL +
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVQ 139
Query: 135 Q----RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ R + DA+ YA+ G + F TSAK ++ +F E+++++
Sbjct: 140 EQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 119/189 (62%), Gaps = 12/189 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IWDTAGQ
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQ 78
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK DL
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVA 138
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ + F TSAK ++E+F +++++ + +AS+
Sbjct: 139 EQPDKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL-------PIEQASQ 191
Query: 191 LSRRGSMRR 199
RG+ R
Sbjct: 192 RGMRGAAGR 200
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 110/167 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDME 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
+R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 127 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|255546521|ref|XP_002514320.1| protein with unknown function [Ricinus communis]
gi|223546776|gb|EEF48274.1| protein with unknown function [Ricinus communis]
Length = 199
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 114/175 (65%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R ++ K+VLLG+ GKTS+VLR+V+ +F + +T+ A+F + L++ +
Sbjct: 1 MARPNNKNIQAKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEATIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + AV+VYDIT DSFE+ K WV EL++ ++ + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSTDSFERAKRWVLELQRQGNPNLIMFL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
A NK+DL +R V E+ E+YA+ G V TSAK + + E+F E+++++ + A
Sbjct: 121 AANKVDLGDKRKVASEEGEQYAKENGLVFLETSAKTAQNVNELFYEIAKKLAKAA 175
>gi|388858617|emb|CCF47914.1| probable GTP-binding protein ypt5 [Ustilago hordei]
Length = 223
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ A + IWDTAGQ
Sbjct: 12 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQ 71
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-E 133
ER+ +L P+YYR +N AV+VYDIT S +K K W++EL++ +I + +AGNK DL
Sbjct: 72 ERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAS 131
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQE 182
+R + E+A+KYAQ + TSAK + + E+F +++++ LE+A +
Sbjct: 132 TRRAIPTEEADKYAQEEELLFLETSAKDSSNVSELFTMIARKLPLEQAAD 181
>gi|302833012|ref|XP_002948070.1| RabF/Rab5 [Volvox carteri f. nagariensis]
gi|300266872|gb|EFJ51058.1| RabF/Rab5 [Volvox carteri f. nagariensis]
Length = 203
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 19/206 (9%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA--IWDTAGQ 74
K+VLLGE GK+S+VLRYV+ +F + +T+ A+FL K L LN+ IWDTAGQ
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTL----PELNVKFEIWDTAGQ 70
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+H+L P+YYR + A++VYDIT DSF + K+WV+EL++ + + +AGNK DLE
Sbjct: 71 ERYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPVMIMALAGNKADLES 130
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
QR V E+ + YA G + TSAK + E+F E++++ L K R
Sbjct: 131 QRAVSVEEGQAYAAENGLYYLETSAKTAANVNELFEEIARK---------LPKPETAPR- 180
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ +V+E++ KS CC
Sbjct: 181 -PVQGGGIVLENQQ--AQDRKKSSCC 203
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT +SF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + + F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P SS + CC
Sbjct: 183 M---VLV----DRPAESSQAASCC 199
>gi|154414779|ref|XP_001580416.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736294|gb|AAX97476.1| small Rab GTPase RabF1 [Trichomonas vaginalis]
gi|121914633|gb|EAY19430.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 104/153 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VL+G GKTS+V +YV KF + I+T Q K++ +L+L IWDTAGQER
Sbjct: 5 KIVLVGAQHTGKTSIVNKYVLGKFTQHTISTTQPGLAQKQITHRDHQLSLEIWDTAGQER 64
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
++AL P++YR + ++V+D+TD++SF + + W++ELKK G++I + +AGNK+DL +R
Sbjct: 65 YNALSPLFYRDAEAGIVVFDLTDQESFTRAEKWIEELKKARGDNIHIVVAGNKVDLVDKR 124
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF 169
+ DA++ AQSV A +F TSAK IE +F
Sbjct: 125 KISPADAQRIAQSVNAPYFETSAKTAENIEALF 157
>gi|154337122|ref|XP_001564794.1| putative small GTPase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061832|emb|CAM38867.1| putative small GTPase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 286
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 111/174 (63%), Gaps = 11/174 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASF-------LNKKLNIAG--KRLN 65
SFKVVLLGEG VGKTS++ RYV F+EK +T+QAS +N N G + +
Sbjct: 9 SFKVVLLGEGRVGKTSLISRYVYSMFDEKEASTVQASMCSSKAVPINDPSNAPGAIREVE 68
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
LA+WDTAGQERFHAL P+YYR ++GA++VYD+TD D+ KV+ W KEL ++G +I L
Sbjct: 69 LALWDTAGQERFHALAPMYYRNADGAIIVYDVTDADTLRKVRTWAKELYAVVGEGNIQLV 128
Query: 125 IAGNKIDLEK-QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK D +R V + + A + A HF SAK + + E+F ++ +++
Sbjct: 129 LCGNKADASPTEREVSEGEGAAMAAELKAAHFFASAKTGQNVAEVFSAIATQVV 182
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 34 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWDTAGQE 93
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 94 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 153
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
R V +E A+K A+ G F TSAK + ++E F L++ +L K+ L S+ S
Sbjct: 154 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLGNGSKPS 210
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGARAASCC 199
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + + I GKR+ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V++E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKS 173
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 128/219 (58%), Gaps = 20/219 (9%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA + ++N ++ K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L +
Sbjct: 1 MATTGNKNINA----KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++VYDI+++ SFE+ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ +AGNK DL R V E+A+ YAQ G TSAK + ++F E+++R L + Q
Sbjct: 117 VMALAGNKADLLDARKVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKR-LPRVQ 175
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+V++ D PT S+ + CC
Sbjct: 176 P------------APNPSGMVLM---DRPTESTASASCC 199
>gi|255639786|gb|ACU20186.1| unknown [Glycine max]
Length = 233
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S SF VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDT
Sbjct: 40 SPCSFHQVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDT 99
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+H+L P+YYR + A++VY IT DSF + K WV+EL+K ++ + +AGNK D
Sbjct: 100 AGQERYHSLAPMYYRGAAAAIIVYGITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKAD 159
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
LE +R V E+A YA+ G TSAK + ++F E+++R L +AQ
Sbjct: 160 LEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKR-LPRAQP 209
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK-RLNLAIWDT 71
T K+VLLG+ VGK+ +V+R+ +D+F+E T+ A+F+ + +N+ + IWDT
Sbjct: 11 TLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDT 70
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQER+ +L P+YYR + A++VYDIT+ ++F+ K+W+ EL+ + NDI + + GNK D
Sbjct: 71 AGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYD 130
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
LE RTV E A YA+ G + F TSAK ++E+F E+++++
Sbjct: 131 LESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|365758696|gb|EHN00526.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 220
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 131/226 (57%), Gaps = 18/226 (7%)
Query: 6 LDRNSS--STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D N++ T + K+VLLGE VGK+S+VLR++ + F E T+ A+FL K++ K
Sbjct: 1 MDTNTAGIPTLTIKLVLLGESAVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRNDKA 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+DIT+E SF K +NWV+EL + LG++I +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQNWVEELHEKLGDNIII 120
Query: 124 TIAGNKIDLE------KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK+DL R V +++ + Q ++F SAK + I+E+F + +++
Sbjct: 121 ALVGNKMDLLTMQGEISNRAVNEDEIQNLCQQENLLYFEVSAKTGKNIQEVFQAVGEKI- 179
Query: 178 EKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
++ + SE ++ + +D+ + S+T G TG
Sbjct: 180 -PFPTHNVGRTSE--------HDLTITDDQRIDLESTTVEGARETG 216
>gi|145476009|ref|XP_001424027.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391089|emb|CAK56629.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ VGK+S+VLR+ D F H +TL A+F+ + + + G IWDTAGQE+
Sbjct: 6 KVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEK 65
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR + A++VYDIT +DSF+ +K+WV ELK I + GNK DL +
Sbjct: 66 YKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIEDE 125
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML-EKAQEFDLAKASELSRRG 195
V ++A YAQ +GA TS K N+GI+E+F+ +++++L E+ + K + +
Sbjct: 126 KVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKVDKPQNA 185
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S+R V +D GCC
Sbjct: 186 SVR-----VTADDQTKKKKKDGGCC 205
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 123/217 (56%), Gaps = 23/217 (10%)
Query: 8 RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNL 66
R FK+VLLGE VGK+S+VLR+V+ +F E +T+ A+FL + + + G ++
Sbjct: 4 RGGQQMNQFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDGTKVKF 63
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQER+H+L P+YYR + A++VYDIT SF + K+WVKEL+K N + +A
Sbjct: 64 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITSHASFLRAKSWVKELQKQAENVAVIALA 123
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
GNK DL +R V E+ E YAQ + TSAK + E+F ++ + L K Q+
Sbjct: 124 GNKADLAARREVQTEEVEAYAQEEKLLFMETSAKTAFNVVEIFAAIA-KHLPKNQD---- 178
Query: 187 KASELSRRG---SMRRNVVVVEDEDLPTSSSTKSGCC 220
+RRG ++RR + + GCC
Sbjct: 179 -----TRRGDGVNLRR---------AEAAEAKSGGCC 201
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLG+ GK+S+VLR+V +F E +T+ A+F ++ L + + IWDTAGQ
Sbjct: 7 SAKLVLLGDMGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+H+L P+YYR + A++VYDIT DSF + K WV+EL++ ++ +T+AGNK DL
Sbjct: 67 ERYHSLAPMYYRGAAAAIVVYDITSLDSFNRAKKWVQELQRQGNPNMVMTLAGNKADLTA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+R V E+A+ YA G TSAK + + E+F ++++R+L+
Sbjct: 127 KRKVELEEAQAYATENGLFFIETSAKTAQNVNELFYDIAKRVLK 170
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+ +VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSGLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAGGTRAASCC 199
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
Query: 5 SLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL 64
S +R + + K++L+G+ VGK+ ++LR+V+DKFN ITT+ F K ++I GKR+
Sbjct: 2 SANRAKAFDRTMKLLLVGDSGVGKSCLLLRFVDDKFNPSFITTIGIDFKIKTIDINGKRI 61
Query: 65 NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLT 124
L +WDTAGQERF + YYR + G ++VYD+ DE+SFE VK W + + + +D L
Sbjct: 62 KLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVNQHAKDDAQLF 121
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
+ GNK D E+ R V + E AQ +G SAK + + E+F +L+ +LEK D
Sbjct: 122 LVGNKCDDEESRQVSTKQGELLAQELGIPFMEASAKSSVNVSEVFYKLAGLILEKTS--D 179
Query: 185 LAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
ASE S++G++ D + + SGCC
Sbjct: 180 EEAASEQSQKGNV--------DVRQAGHTVSXSGCC 207
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK-RLNLAI 68
+ T K+VLLG+ VGK+ +V+R+ +D+F+E T+ A+F+ + +N+ + I
Sbjct: 8 TPKTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEI 67
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR + A++VYDIT+ ++F+ K+W+ EL+ + NDI + + GN
Sbjct: 68 WDTAGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGN 127
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DLE RTV E A YA+ G + F TSAK ++E+F E+++++
Sbjct: 128 KYDLESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAFAGNKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V ++A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTADEARVYAEENGLFFMETSAKTAANVNDVFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + S CC
Sbjct: 183 M---VLV----DRPAEGARASSCC 199
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGARAASCC 199
>gi|26354324|dbj|BAC40790.1| unnamed protein product [Mus musculus]
Length = 234
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 30/223 (13%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 136 R------------------TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
R T + ++A+ YA + TSAK + E+F+ ++++
Sbjct: 142 RAVEFQPCHLPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK-- 199
Query: 178 EKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L K + G+ R V E P S +S CC
Sbjct: 200 -------LPKNEPQNAAGAPGRTRGVDLQESNPAS---RSQCC 232
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K++++GE VGK+S++LR+ ED F+ H T+ F K L + G R+ LAIWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLE 133
ERF L P YYR GA+LVYD+T+ DSF V+NW+ EL N DI + GNK DLE
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
++R + +E+ +K A+ + +SAK G++ F EL + +++ +
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPE 176
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 116/175 (66%), Gaps = 4/175 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S ++N ++ K+VLLG+ GK+S+VLR+V+D+F E +T+ A+F ++ L +
Sbjct: 1 MASSGNKNINA----KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++V+DIT++ SFE+ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ +AGNK DL R V E+AE YAQ TSAK ++++F E+++R+
Sbjct: 117 VMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRL 171
>gi|409083629|gb|EKM83986.1| hypothetical protein AGABI1DRAFT_110587 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 209
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 3/210 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++ +I +T+ GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL+ +R V QE+A+KYA+ G + TSAK G+ E+F +++++ A A++
Sbjct: 122 SDLDARRQVTQEEAKKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPS--ARSG 179
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
SR G R V ++ + P C
Sbjct: 180 AGSRTGPGARQGVDLDRQANPRGEGEACNC 209
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA S ++N ++ K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L +
Sbjct: 1 MATSGNKNINA----KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++VYDIT++ SF++ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ +AGNK DL R V EDA+ YAQ G TSAK + ++F E+++R+
Sbjct: 117 VMALAGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRL 171
>gi|225445266|ref|XP_002284542.1| PREDICTED: ras-related protein RHN1 isoform 1 [Vitis vinifera]
gi|359484588|ref|XP_003633124.1| PREDICTED: ras-related protein RHN1 isoform 2 [Vitis vinifera]
gi|297738837|emb|CBI28082.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 119/193 (61%), Gaps = 10/193 (5%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R + K+VLLG+ GKTS+VLR+V+ +F + +T+ A+F + L++ +
Sbjct: 1 MARTGNKNIQAKLVLLGDMGTGKTSLVLRFVKGQFYDFQESTIGAAFFTQVLSLNEATIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + AV+VYDIT DSFE+ K WV+EL++ ++ + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLLMIL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
NK DLE +R V E E+YA+ G + F TSAK + + E+F E+++ +L
Sbjct: 121 VANKADLETKREVENEKGEQYAKENGLLFFETSAKTAQNVNELFYEIAK---------NL 171
Query: 186 AKASELSRRGSMR 198
AKA SR G ++
Sbjct: 172 AKACP-SRPGGIK 183
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 109/169 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKT +++R+ ED FN +I+T+ F K + + GK++ L +WDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE S+E ++NW+K +K+ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+R V +E EK A+ G F TSAK + +EE F L++ +L K+ +
Sbjct: 127 AKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDILLKSNK 175
>gi|340383289|ref|XP_003390150.1| PREDICTED: ras-related protein RabJ-like [Amphimedon queenslandica]
Length = 229
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 108/162 (66%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTS+V+R + F+E T+ ASF + ++ +AG R+ L +WDTAGQER
Sbjct: 7 KVVILGAQGVGKTSLVVRNMGGVFSENVSPTIGASFFSLQMILAGFRIKLQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A++VYDIT+E +F++ K WV E++ + + L+I GNK DL K R
Sbjct: 67 FRSMAPMYYRKANAAMIVYDITNEKTFDEAKLWVNEVQSKVDLPMALSIVGNKTDLSKNR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V +A S+GA+ TSA N G++E FL+++Q + E
Sbjct: 127 QVSMNKGTTFAHSLGAMFTETSAAENIGVKEAFLKVAQGITE 168
>gi|148670589|gb|EDL02536.1| RAB5C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 270
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 30/223 (13%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 58 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 117
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+ D+F + KNWVKEL++ +I + +AGNK DL +
Sbjct: 118 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 177
Query: 136 R------------------TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
R T + ++A+ YA + TSAK + E+F+ ++++
Sbjct: 178 RAVEFQPCHLPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK-- 235
Query: 178 EKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L K + G+ R V E P S +S CC
Sbjct: 236 -------LPKNEPQNAAGAPGRTRGVDLQESNPAS---RSQCC 268
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 67
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 68 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 127
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 128 EVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 178
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 179 M---VLV----DRPAEGARAASCC 195
>gi|405966153|gb|EKC31469.1| Ras-related protein Rab-43 [Crassostrea gigas]
Length = 192
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
Query: 7 DRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNL 66
D + + Y FK+VL+G+ VGKT VV R+ + EKH +T+ F K L I GK + L
Sbjct: 8 DSDDTFDYLFKIVLIGDAGVGKTCVVQRFKSGTYVEKHGSTIGVDFTMKTLQIDGKLIKL 67
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQERF + YYR +NG ++ YDIT + SFE V W++++K+ G +I I
Sbjct: 68 QIWDTAGQERFRTITQSYYRSANGVIIAYDITKKGSFESVPRWIEDVKRYAGPNIVQCII 127
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVH-FHTSAKMNRGIEEMFLELSQR 175
GNK D+E R V +A+ +AQ G V TSAK N IEE+F+E+++R
Sbjct: 128 GNKKDMEHLREVNLSEAKAFAQHHGMVDAIETSAKENTNIEELFMEMAKR 177
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 15/213 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I K + IWDTAGQ
Sbjct: 9 AVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKYEIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 69 ERFASLAPMYYRNAQAALVVYDITKPASFLKARHWVKELHEQASKDITIALVGNKYDLVE 128
Query: 133 -----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
+ R V E+ +K A+ G + F TSAK + + E+F+ + ++ E + + +
Sbjct: 129 DENDGDTLRKVSVEEGQKLAEDEGLLFFETSAKTSYNVNEVFVGIGTKIPESSAPTGVQQ 188
Query: 188 ASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
A + R + +++ SGCC
Sbjct: 189 AGNEAGRIDLTTGAA--------STTQQTSGCC 213
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 123/223 (55%), Gaps = 14/223 (6%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA + Y FKV+++G+ VGK+S++LR+ +D F+E +T+ F K L + G
Sbjct: 1 MAAPPPQTFPYDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEG 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML---G 118
KR+ L IWDTAGQERF L YYR ++G VLVYD+T DSFE ++ W+KE++ G
Sbjct: 61 KRVKLTIWDTAGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQWLKEVQMYSPGNG 120
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ + GNK DLE+Q V E+A+ +A+S G + SAK GI ++F E+ ++MLE
Sbjct: 121 ESVVKLLVGNKCDLERQ--VPFEEADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKMLE 178
Query: 179 KAQEFDLAKASELSRRGSMRRNVVVVEDEDLPT-SSSTKSGCC 220
+ A R V + P +SGCC
Sbjct: 179 NPETLATAVPG--------RPKVQIKPQHARPNMMDDEESGCC 213
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AG+K DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGSKSDLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 DVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKR---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P S + CC
Sbjct: 183 M---VLV----DRPAEGSRAASCC 199
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS Y FK++L+G VGK+ ++LR+ +D + +I+T+ F K + + GK + L I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERF + YYR S+G ++VYD+TD+DSF+ VK W++E+ + + + + GN
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYATSTVLKLLVGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLE +R V + A+++A S TSA + +EE FL +++++ E + + +
Sbjct: 122 KCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQIKESMNQQKMEDS 181
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ S+ G NV + + L SS SGCC
Sbjct: 182 NAASKGGDKNSNVNLTGGQSLTNSS---SGCC 210
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K++++GE VGK+S++LR+ ED F+ H T+ F K L + G R+ LAIWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLE 133
ERF L P YYR GA+LVYD+T+ DSF V+NW+ EL N DI + GNK DLE
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
++R + +E+ +K A+ + +SAK G++ F EL + +++ +
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPE 176
>gi|74834519|emb|CAI44571.1| rab_A23 [Paramecium tetraurelia]
Length = 206
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ VGK+S+VLR+ D F H +TL A+F+ + + + G IWDTAGQE+
Sbjct: 6 KVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEK 65
Query: 77 FHALGPIYYR-MSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+ +L P+YYR + A++VYDIT +DSF+ +K+WV ELK I + GNK DL +
Sbjct: 66 YKSLTPLYYRGFAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIED 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML-EKAQEFDLAKASELSRR 194
V ++A YAQ +GA TS K N+GI+E+F+ +++++L E+ + K +E +
Sbjct: 126 EKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKTEKPQN 185
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
S++ V VED++ + GCC
Sbjct: 186 PSVK---VTVEDQN--KKKKKEGGCC 206
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 119/189 (62%), Gaps = 12/189 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IWDTAGQ
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQ 79
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ER+ +L P+YYR +N AV+VYDIT S +K K WVKEL++ +I + +AGNK DL
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKADLVA 139
Query: 133 --EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V DAE YA+ + F TSAK ++E+F +++++ + +A++
Sbjct: 140 EQPDKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL-------PIEQATQ 192
Query: 191 LSRRGSMRR 199
RG+ R
Sbjct: 193 RGMRGAAGR 201
>gi|357153419|ref|XP_003576446.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 206
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 115/182 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 15 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 74
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 75 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALAGNKADMLEAR 134
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ Q + LS+R +
Sbjct: 135 QVPMEEAKTYAQENGLFFMETSAKTATNVNDVFYEIAKRLLQGQQAQNPQAGMVLSQRPT 194
Query: 197 MR 198
R
Sbjct: 195 ER 196
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ + FK+VLLG+ VGK+ +V+R+V D+F T+ A+FL + +N+ + IW
Sbjct: 2 ADQSLHFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR + A++VYDIT +SF K WVKEL++ ++ + +AGNK
Sbjct: 62 DTAGQERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
DLE+ R + +E+AE+YA G + TSAKM + E+F + ++ + A
Sbjct: 122 CDLEENRQIPREEAEEYAVENGLLFMETSAKMALNVREIFESIGHKLPKGA 172
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEVK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E AEK A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLARDILLKS 173
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ ++ + + K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + +
Sbjct: 1 MSQHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQERF +L P+YYR + AV+VYDIT SF K ++WVKEL + DI + +
Sbjct: 61 YEIWDTAGQERFASLAPMYYRNAQAAVVVYDITKPASFIKARHWVKELHEQANRDITIAL 120
Query: 126 AGNKIDL---------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
GNK+DL E R V E+ + A G + F TSAK + E+F+ + ++
Sbjct: 121 VGNKLDLVEDDSAEDGETLRKVSIEEGQTLADEEGLLFFETSAKTGNNVNEVFVGIGSKI 180
Query: 177 LEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
A+ S RR + N +D S++T+S CC
Sbjct: 181 PSVTVAGSEAQESSNGRRIDLTAN---TDD-----SNATRSTCC 216
>gi|353242503|emb|CCA74142.1| probable GTP-binding protein ypt5 [Piriformospora indica DSM 11827]
Length = 204
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 124/192 (64%), Gaps = 5/192 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S Y FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SRQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLDDQTTIRFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK ++W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DLE +R V QE+A+KYA+ G + SAK G++++F+ +++++ A + +A
Sbjct: 122 TDLEARRQVTQEEAKKYAEEEGLMWCEASAKTGEGVQDIFMAIAKKLPLSAPQSQKGQA- 180
Query: 190 ELSRRGSMRRNV 201
R G R V
Sbjct: 181 ---RAGGQPRGV 189
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 1 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 60
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 61 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 120
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 121 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 165
>gi|383857603|ref|XP_003704294.1| PREDICTED: ras-related protein RabJ-like [Megachile rotundata]
Length = 217
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV LG VGKTS+++RYV FNE T+ ASF KLN+ ++ L +WDTAGQER
Sbjct: 7 KVVALGSQGVGKTSMIIRYVGKAFNEHVDPTIGASFFTCKLNVENVKIMLQVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LV+D+T ++F +K WV EL++ + + + L + GNK DL K+R
Sbjct: 67 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKGWVTELRRNVEDAMVLAVIGNKSDLIKER 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
V E+ YA ++GA + TS + GIE +FL++ +L A
Sbjct: 127 QVDAEEGRVYATNIGASYHETSVLQDEGIENVFLDIGMGLLRLA 170
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 132/218 (60%), Gaps = 21/218 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-----LNLAIWD 70
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + + + + IWD
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTIKVESEDQQEVVIKFEIWD 63
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNK 129
TAGQER+ +L P+YYR +N A++VYD+T EDS K K WV+ELK +G+ D+ + + GNK
Sbjct: 64 TAGQERYKSLAPMYYRNANAALVVYDVTQEDSLNKAKAWVEELKNKVGDEDLVIFLVGNK 123
Query: 130 IDL------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEF 183
+DL E +R V A++YA+ G + SAK G++E+F + QR+ + +E
Sbjct: 124 VDLCEGSDNEDKRAVAATLAKQYAEDQGLMFDEVSAKTGHGVKEVFQAIGQRLYDTKKE- 182
Query: 184 DLAKASELSRRGSMRRNVVVVEDEDLP-TSSSTKSGCC 220
EL+ R N V D ++P S++ +GCC
Sbjct: 183 ------ELATRQRGNGNDGQV-DINVPRPSTNDTTGCC 213
>gi|449268714|gb|EMC79563.1| Ras-related protein Rab-17 [Columba livia]
Length = 214
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 14/210 (6%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
TY +KVVLLG VGK+S+ RYV++ F E + T+ SF + LN+ + IWDT
Sbjct: 16 PTYIYKVVLLGNTSVGKSSLAYRYVKNDFKES-LPTVGCSFFTQTLNLEVATVRFEIWDT 74
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKEL-KKMLGNDICLTIAGNKI 130
AGQE++H++ +YYR ++ A+LVYDIT++++ + K W+ +L K+ L ++I + + GNK
Sbjct: 75 AGQEKYHSVCHLYYRGAHAALLVYDITNKETLNRAKLWLTDLEKEFLPDEIVIALVGNKT 134
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DL +R V E+ E++A++ G + TSAK N + ++F+ ++Q +LE+ QE KAS
Sbjct: 135 DLAAKREVATEEGEEFARTKGLLFMETSAKSNHQVNDIFMAIAQELLEREQE----KASN 190
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S S R+ V DL S ++GCC
Sbjct: 191 PS--PSRGRSAV-----DL-GQSRVRTGCC 212
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 115/182 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ Q D L++R +
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPA 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|195347108|ref|XP_002040096.1| GM15536 [Drosophila sechellia]
gi|194135445|gb|EDW56961.1| GM15536 [Drosophila sechellia]
Length = 261
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KV++LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAMAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +E+A +A S+GA +F TS + ++G+E++F+ +Q ++ A E
Sbjct: 127 QRAVSREEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADE 174
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 125/197 (63%), Gaps = 6/197 (3%)
Query: 3 ANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK 62
A++ + S Y FK+V+LG+ VGK+S+V R+V++ F E +T+ A+F+ + +++
Sbjct: 20 ASTDESTGHSFYQFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDC 79
Query: 63 RLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDIC 122
+ IWDTAGQER+ L P+YYR S+ AV+VYDIT +SF++ K W++EL+ +G ++
Sbjct: 80 TVKFEIWDTAGQERYRTLAPMYYRGSSAAVIVYDITMRESFQQAKGWIQELQAHVGPNVV 139
Query: 123 LTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ------RM 176
L +AGNK+DL+ R V +E AE++A + + TSAK ++E+F E+++ R+
Sbjct: 140 LALAGNKVDLDSSREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPKGRRI 199
Query: 177 LEKAQEFDLAKASELSR 193
E + F + S L +
Sbjct: 200 KELHEGFKIDNQSHLPK 216
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 50 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 109
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 110 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 169
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 170 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 214
>gi|443701022|gb|ELT99690.1| hypothetical protein CAPTEDRAFT_6450 [Capitella teleta]
Length = 169
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 99/163 (60%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S + K+ LLG+ VGK+S+V R+V D F +T+ A+FL K + + G IWDT
Sbjct: 2 SVHEVKLCLLGDSGVGKSSIVHRFVYDSFRPAMTSTIGAAFLTKTVIVDGTTYKYQIWDT 61
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQE++ AL P+YYR + A++VYDIT E SF K+W+ EL+K +I L IAGNK+D
Sbjct: 62 AGQEKYRALAPMYYRGAAAAIIVYDITQESSFRATKSWITELQKHASPNIVLAIAGNKLD 121
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
L+ R V A YA G V TSAK I +F+E+S+
Sbjct: 122 LDDLRDVQYSTALSYADKQGTVFVETSAKSAANIPALFMEISE 164
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 11 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 70
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 71 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 130
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 131 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 175
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+V+R+V+ +F E +T+ A+F + L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
V E+A YA+ G TSAK + +F E+++R L +AQ
Sbjct: 132 KVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKR-LPRAQ 175
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 20/224 (8%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M+N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + + G
Sbjct: 1 MSNEFD------YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR ++G ++VYDITD +SF VK W+ E+ + + +
Sbjct: 55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDRYANDSV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
C + GNK DL + RTV A+ YA+ +G TSAK + +EE FL +S +
Sbjct: 115 CKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDLPTSSSTKSGCCLT 222
K S+ + ++ R N+V ++ + + KS CCLT
Sbjct: 170 -----KKSKAGSQAALERKPSNIVQMKGQPI-QQEQQKSRCCLT 207
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+ LR+V +F + +T+ A+FL + L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ DSF + K WV+EL++ ++ + +AGNK DL +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSAKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
V E+ + YA+ G TSAK + + E+F E++ R L KAQ
Sbjct: 132 KVEAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIA-RKLPKAQ 175
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 73 YHGLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ Q D L++R +
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPA 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N++ T FK+VLLGE VGK+S+VLR+ + +F+E +T+ A+FL + + + + I
Sbjct: 29 NANKTCQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGAAFLTQTVCMDDMTVKFEI 88
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQER+ +L P+YYR + A++VYDIT++ SF K KNWV EL++ +I + +AGN
Sbjct: 89 WDTAGQERYQSLAPMYYRAARAAIVVYDITNQKSFTKAKNWVNELQRQALPNIVIALAGN 148
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DL R V +A+ YA+ G + TSAK + ++F +++ +
Sbjct: 149 KADLASSRKVEFNEAQAYAEENGLLFMETSAKTAMNVNDIFWAIAKEL 196
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|17864296|ref|NP_524713.1| RabX1 [Drosophila melanogaster]
gi|6649244|gb|AAF21440.1|AF209706_1 Rab-related GTP-binding protein Chrowded [Drosophila melanogaster]
gi|7291595|gb|AAF47018.1| RabX1 [Drosophila melanogaster]
gi|21483474|gb|AAM52712.1| LD47384p [Drosophila melanogaster]
gi|220946434|gb|ACL85760.1| chrw-PA [synthetic construct]
gi|220956146|gb|ACL90616.1| chrw-PA [synthetic construct]
Length = 261
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KV++LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +E+A +A S+GA +F TS + ++G+E++F+ +Q ++ A E
Sbjct: 127 QRAVSREEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADE 174
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IW
Sbjct: 4 ASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K + WVKEL+ DI + + GNK
Sbjct: 64 DTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNK 123
Query: 130 IDL--------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DL + R V E+ +K A+ G + F TSAK + E+F+++ +++ E
Sbjct: 124 YDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPE 180
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 115/178 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
R V +E A+K A+ G F TSAK + ++E F L++ +L K+ ++ K + S+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGPEIRKRQQASQ 186
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 119/184 (64%), Gaps = 5/184 (2%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLG+ VGK+ +V+R+ +D+F E +T+ A+F+ + +N+ + IWDTA
Sbjct: 42 TLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTA 101
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND---ICLTIAGNK 129
GQER+ +L P+YYR + AV+VYDI++ DSF+ K+WV+EL+ + ND + + +AGNK
Sbjct: 102 GQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSV--NDRSNVVIALAGNK 159
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V +++A++YA G + TSAK + E+F E++ + + +E D
Sbjct: 160 EDLAAERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHAGF 219
Query: 190 ELSR 193
+L++
Sbjct: 220 QLNK 223
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTVEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGARAASCC 199
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+V+R+V+ +F E +T+ A+F + +++ + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT +S + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R+ R
Sbjct: 132 KVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRL----------------PRAQ 175
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
+N + ED P S + CC
Sbjct: 176 PAQNPAGMVLEDKPAQGSQAASCC 199
>gi|194885321|ref|XP_001976418.1| GG20024 [Drosophila erecta]
gi|190659605|gb|EDV56818.1| GG20024 [Drosophila erecta]
Length = 261
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KV++LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKENEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQT 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +E+A +A S+GA +F TS + ++G+E++F+ +Q ++ A E
Sbjct: 127 QRAVSREEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADE 174
>gi|196000895|ref|XP_002110315.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
gi|190586266|gb|EDV26319.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
Length = 229
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 127/218 (58%), Gaps = 23/218 (10%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDVTVKFEIWDTAGQE 80
Query: 76 -------------RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDIC 122
R+H+L P+YYR + A++VYDI++ +SF++ K WVKEL++ +I
Sbjct: 81 NIFLILPSFCRYLRYHSLAPMYYRGAQTAIVVYDISNAESFQRAKAWVKELQRQASPNIV 140
Query: 123 LTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+ +AGNK DL +R V ++A+ YA+ G + TSAK + E+FL +++++ +
Sbjct: 141 IALAGNKADLANKRMVDADEAQVYAEENGLLFMETSAKTAMNVNEIFLAIAKKLPK---- 196
Query: 183 FDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
SE G+ + V D + P ++S GCC
Sbjct: 197 ------SEQGGGGAATQGGARVVDINKPANNSGGGGCC 228
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 128/219 (58%), Gaps = 20/219 (9%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA + ++N ++ K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L +
Sbjct: 1 MATTANKNINA----KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++VYDI+++ SFE+ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ +AGNK DL R V E+A+ +AQ G TSAK + ++F E+++R+
Sbjct: 117 VMALAGNKADLLDARKVAAEEAQVFAQENGLFFMETSAKTATNVNDIFYEIAKRL----- 171
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S++ + V++ D PT + + CC
Sbjct: 172 -------SQVQPAPNPSGMVIM----DRPTERTASAACC 199
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ +D+ I GNK D+E
Sbjct: 67 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
++R V ++ E+ A G TSAK N I+E F L++ + K ++ ++ +S
Sbjct: 127 ERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGSVSN 186
Query: 194 RG 195
G
Sbjct: 187 TG 188
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 115/182 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ Q D L++R +
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPA 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IW
Sbjct: 4 ASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K + WVKEL+ DI + + GNK
Sbjct: 64 DTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNK 123
Query: 130 IDL--------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DL + R V E+ +K A+ G + F TSAK + E+F+++ +++ E
Sbjct: 124 YDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPE 180
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLG+ VGK+ +V+R+ +D+F E +T+ A+F+ + +N+ + IWDTA
Sbjct: 42 TLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTA 101
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND---ICLTIAGNK 129
GQER+ +L P+YYR + AV+VYDI++ DSF+ K+WV+EL+ + ND + + +AGNK
Sbjct: 102 GQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSV--NDRSNVVIALAGNK 159
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
DL +R V +++A++YA G + TSAK + E+F E++ + + +E D
Sbjct: 160 EDLAAERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHD 214
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
Length = 205
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 11/215 (5%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ ++ + S K+VLLGE VGK+S+VLR+V ++F E T+ A+FL +K + + +
Sbjct: 1 MSQHPTPATSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCTVGDRTIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQERF +L P+YYR + AV+VYDIT SF + ++W+KELK I + +
Sbjct: 61 YEIWDTAGQERFASLAPMYYRNAQAAVVVYDITKPSSFIRARHWIKELKDQSPEGIVIAL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
GNK+DLE +R V + E+ A S G + F TSAK G+ E+F + + +
Sbjct: 121 VGNKLDLEDERKVEASEVEEEANSQGLMFFQTSAKTGEGVLEVFEGIGKNI--------- 171
Query: 186 AKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
K + S+ S + + D + ++T +GCC
Sbjct: 172 -KIGDTSQATSNNNGINRI-DLNAEAPANTNTGCC 204
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQE 92
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+VYDIT DSF K + WVKEL+K DI L + GNK DL+++
Sbjct: 93 RYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNKADLQEK 152
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +D +YA+ G TSAK I E+F E+++R+
Sbjct: 153 RKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRL 193
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 6 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ +D+ I GNK D+E
Sbjct: 66 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIE 125
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
++R V ++ E+ A G TSAK N I+E F L++ + K ++ ++ +S
Sbjct: 126 ERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGSVSN 185
Query: 194 RG 195
G
Sbjct: 186 TG 187
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K++++GE VGK+S++LR+ ED F+ +H T+ F K + + G R+ LAIWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLE 133
ERF L P YYR GA+LVYD+T +SF V+NW+ EL N DI + GNK DLE
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTSRESFSNVENWLNELDTYTTNHDIVKMLVGNKCDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+R V +E+ +K A+ + SAK G++ F EL + +++ + ++ A ++
Sbjct: 129 DKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEAANSA 184
>gi|255728925|ref|XP_002549388.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
gi|240133704|gb|EER33260.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
Length = 207
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 112/167 (67%), Gaps = 3/167 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR--LNLAIWDTAG 73
FK+VLLGE VGK+S+V R+V++ F++ +T+ A+FL + + I + + IWDTAG
Sbjct: 13 FKLVLLGESAVGKSSIVHRFVKNSFDDLRESTIGAAFLTQSITIPETQTTIKFEIWDTAG 72
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND-ICLTIAGNKIDL 132
QER+ +L P+YYR S+ A++VYDIT S ++ K+W++EL+K ND I + + GNK+DL
Sbjct: 73 QERYKSLAPMYYRNSHAAIVVYDITKTSSLQRAKDWIEELRKNSSNDGIIIALVGNKLDL 132
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ +R + Q D E+YA + F SAK G+ ++F +++++ +K
Sbjct: 133 QDEREIEQSDVEEYATEQNLLSFECSAKSGEGVHDIFDAIARKLSDK 179
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++ W+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKERADKLAREHGIRFFETSAKSSTNVDEAFSSLARDILHKS 173
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLG+ VGK+ +V+R+ +D+F E +T+ A+F+ + +N+ + IWDTA
Sbjct: 42 TLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTA 101
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND---ICLTIAGNK 129
GQER+ +L P+YYR + AV+VYDI++ DSF+ K+WV+EL+ + ND + + +AGNK
Sbjct: 102 GQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSV--NDRSNVVIALAGNK 159
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V ++A++YA G + TSAK + E+F E++ + + +E D
Sbjct: 160 EDLAAERQVPNQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHAGF 219
Query: 190 ELSR 193
+L++
Sbjct: 220 QLNK 223
>gi|332215306|ref|XP_003256782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Nomascus
leucogenys]
gi|395734106|ref|XP_003776358.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pongo abelii]
Length = 201
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 26/205 (12%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ F IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGVKF--------------EIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 182
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 183 ---RGVDLTE----PT-QPTRSQCC 199
>gi|380022458|ref|XP_003695062.1| PREDICTED: ras-related protein RabJ-like isoform 1 [Apis florea]
Length = 221
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV LG VGKTS+++RY+ NE T+ ASF KLN+ R+ L +WDTAGQER
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLSPTIGASFFTCKLNLENARIMLRVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LV+D+T ++F +K WV EL++ + + L + GNK DL K+R
Sbjct: 67 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKER 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V E+ YA +GA ++ TS N GI+ +FL + +L+
Sbjct: 127 QVDAEEGRVYATKIGASYYETSVLQNEGIKNVFLAIGNGLLK 168
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVQRLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A++ A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RRVRKEQADQLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKS 173
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 116/182 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L ++ + + IWDTAGQER
Sbjct: 13 KVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDI+++ SF + K WV+EL+ + + +AGNK DL + R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDISNQASFIRAKKWVQELQAQGNPNTVVALAGNKADLLETR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ + LS+R +
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQAGMVLSQRPN 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|395816588|ref|XP_003781782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Otolemur
garnettii]
gi|410971501|ref|XP_003992207.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Felis catus]
Length = 201
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 26/205 (12%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ F IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGVKF--------------EIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 182
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 183 ---RGVDLTE----PT-QPTRSQCC 199
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A K AQ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVRKEQATKLAQEHGIRFFETSAKSSVNVDEAFSCLARDILLKS 173
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 1837 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 1896
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 1897 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 1956
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 1957 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKS 2001
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|356511351|ref|XP_003524390.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R + + K+VLLG+ GKTS+VLR+V+ +F+E +T+ A+F L++ +
Sbjct: 1 MARTRNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQESTIGAAFFTHVLSLNEATVK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + A++VYDIT DSF + K WV+E+++ + + + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANSSLTMFL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
NK DLE +R V E+ E+YA+ G TSAK + + E+F E+++R++ KA
Sbjct: 121 VANKADLEDERKVRYEEGEEYAKENGLSFLETSAKTAQNVNELFYEIAKRLV-KANPSRQ 179
Query: 186 AKASELSRRGSMRRNVV 202
+ +R G RR +
Sbjct: 180 SGMKLHTRPGETRRGFL 196
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 107/164 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GKR+ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E AEK A+ F TSAK + ++E F L++ +L K
Sbjct: 129 RQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|340500224|gb|EGR27119.1| hypothetical protein IMG5_201440 [Ichthyophthirius multifiliis]
Length = 261
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 114/172 (66%), Gaps = 19/172 (11%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL-NLAIWDTAGQE 75
KVVL+GEG VGKTS+ LRY ++++ ++ TT+ AS+L K++ + + N+AIWDTAGQE
Sbjct: 9 KVVLVGEGRVGKTSIALRYCKNEYTDQQDTTINASYLEKQIVLPDDEIINIAIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKV------------------KNWVKELKKML 117
+F A+ +YY + A++VYDI+ ++SF+KV K+WVKEL++
Sbjct: 69 KFRAIASMYYNDAECAIIVYDISYKESFDKVDFLFKIKKIILIKFQNQVKSWVKELQEYA 128
Query: 118 GNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF 169
+ I + IAGNK DLE R + ++ AE++A+S+G HF SAK N GI+EMF
Sbjct: 129 NDKIIICIAGNKSDLEGIRQIDKKQAEEFAKSIGGYHFSVSAKANIGIKEMF 180
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 107/164 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GKR+ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E AEK A+ F TSAK + ++E F L++ +L K
Sbjct: 129 RQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|195489180|ref|XP_002092628.1| GE11561 [Drosophila yakuba]
gi|194178729|gb|EDW92340.1| GE11561 [Drosophila yakuba]
Length = 261
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KV++LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFAEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +E+A +A S+GA +F TS + ++G+E++F+ +Q ++ A E
Sbjct: 127 QRAVSREEAFVFATSIGASYFETSTETDQGLEQVFISTAQGLVRLADE 174
>gi|125809197|ref|XP_001361028.1| GA17740 [Drosophila pseudoobscura pseudoobscura]
gi|54636201|gb|EAL25604.1| GA17740 [Drosophila pseudoobscura pseudoobscura]
Length = 261
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KVV+LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVVVLGSRGVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +++A +A S+GA +F TS + ++G+E++FL + M+ A E
Sbjct: 127 QRAVSRDEAFLFATSIGATYFETSTETDQGLEQVFLSTALGMVRLADE 174
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 9/207 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED+FN I+T+ F K + + K++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT E SF+ +K W++ +++ +D+ I GNK D+E
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIEQNASSDVERMILGNKCDME 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R V E EK A G F TSAK +EE F +++ + +K + E+S
Sbjct: 127 DKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMD------SKEVST 180
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++++ +++ P S GCC
Sbjct: 181 PHEHEKDIIKPDNKPEPKSG---GGCC 204
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F +T+ A+F ++ L + + L IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ DSF + K WV+EL+K ++ + +AGNK D+ ++
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMALAGNKSDMIEKS 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + + E+F E+++R L KA+ L+ R +
Sbjct: 132 KVSPEEAKVYAQENGLFFMETSAKTAQNVNELFYEIARR-LPKAEPVQHPAGMVLADRSA 190
Query: 197 MR 198
R
Sbjct: 191 ER 192
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 133/219 (60%), Gaps = 19/219 (8%)
Query: 8 RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNL 66
R S+ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ +
Sbjct: 9 RTSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKF 68
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +A
Sbjct: 69 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALA 128
Query: 127 GNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
GNK+DL +R + DA YA+ G + F TSAK + + E+F +++++
Sbjct: 129 GNKLDLVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKL------ 182
Query: 183 FDLAKASELSRRGSMRRNVVVVEDEDL-PTSSSTKSGCC 220
L +A + R + R V DL P S++T+ G C
Sbjct: 183 -PLDQAGPRNLRANPRPGV------DLRPESANTQGGAC 214
>gi|195154485|ref|XP_002018152.1| GL17555 [Drosophila persimilis]
gi|194113948|gb|EDW35991.1| GL17555 [Drosophila persimilis]
Length = 261
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KVV+LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVVVLGSRGVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +++A +A S+GA +F TS + ++G+E++FL + M+ A E
Sbjct: 127 QRAVSRDEAFLFATSIGATYFETSTETDQGLEQVFLSTALGMVRLADE 174
>gi|4741844|gb|AAD28731.1|AF112964_1 small GTP-binding protein [Triticum aestivum]
Length = 209
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 113/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 18 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 77
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 78 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALAGNKADMLEAR 137
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YAQ G TSAK + ++F EL++R+L Q + LS+R +
Sbjct: 138 QVPVEEATTYAQGNGLFFIETSAKTAINVNDVFYELAKRLLAGQQAQNPQAGMVLSQRPA 197
Query: 197 MR 198
R
Sbjct: 198 ER 199
>gi|91085709|ref|XP_972846.1| PREDICTED: similar to AGAP006159-PA [Tribolium castaneum]
Length = 224
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGKTS V+RYVE+ F++ T+ ASF + KL I + L IWDTAGQER
Sbjct: 7 KVVVLGHQGVGKTSTVIRYVENSFSQHITPTVGASFFSCKLLIDDITVKLQIWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P++YR +N A++V+DIT SFE ++ WV ELK+ + N + L + GNK DL K R
Sbjct: 67 FKAMAPMFYRNANAALIVFDITLRQSFESMQGWVFELKQNVDNPMVLCVVGNKSDLAKNR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ---RMLEKAQEFDL 185
V +++A +YA+S+GA + SA ++G+ +F ++++ R+L + + +L
Sbjct: 127 QVNRDEAIQYAKSIGATYHECSAMHDQGVGLVFDDVARGLIRLLGNSSDHNL 178
>gi|109131470|ref|XP_001086669.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Macaca mulatta]
gi|355704975|gb|EHH30900.1| hypothetical protein EGK_20720 [Macaca mulatta]
gi|355757526|gb|EHH61051.1| hypothetical protein EGM_18978 [Macaca fascicularis]
Length = 215
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 126/205 (61%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + I DTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIRDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + ++VYDIT+E+SF + KNWVKEL++ + + +AGNK +L +
Sbjct: 81 RYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNTVIALAGNKANLANK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ +A + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 141 RAVNFQEAQSFADDNSLLFMETSAKTSMDVNEIFMAIAKKLPKDEPQNPGAN----SARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-RPTRSQCC 213
>gi|156553809|ref|XP_001603302.1| PREDICTED: ras-related protein Rab-35-like [Nasonia vitripennis]
Length = 202
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 118/184 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + +++ G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGNYITTIGVDFKIRTVDVDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T DSF VK W+ E++ + + GNK D Q
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEHNCDVVVNRILVGNKNDAPNQ 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N +EEMF+ +++ +L +E +A++ +
Sbjct: 129 KVVLTEDAQRFANQMGIKLFETSAKDNTNVEEMFMAITREVLRTKKESKERQATKTNETV 188
Query: 196 SMRR 199
++R+
Sbjct: 189 NLRK 192
>gi|193603506|ref|XP_001944237.1| PREDICTED: ras-related protein Rab-5B-like isoform 1 [Acyrthosiphon
pisum]
Length = 204
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V +G VGK+S++ RY++ F ++ T+ ASF+ K+ + ++ L +WDTAGQER
Sbjct: 7 KLVFMGSQGVGKSSIITRYIKGDFKKECEATIGASFMYAKVTLRDYQITLKVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L P+YYR S+ +++D++D DSF +VKNW+ E++K + + GNK DL R
Sbjct: 67 FRSLVPMYYRNSDAVAIIFDVSDRDSFNQVKNWINEVRKNTDTPVVYYVVGNKTDLIDTR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+M E+AE++A SV A ++ TS N GI+++F + + ++E
Sbjct: 127 VIMYEEAEEFANSVNARYWETSVYSNTGIQDLFTNIGRNLIE 168
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 111/171 (64%), Gaps = 4/171 (2%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
++ KVV++G+ VGKT++V R+V +KF +KH +T+ A+F+ K L G + L +WDTAG
Sbjct: 8 FTVKVVIVGDCGVGKTALVQRFVFNKF-DKHDSTIGAAFVTKDLLADGVLIKLEMWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+ +L P+Y+R ++ ++VYD+T SF ++ W E + M G + + + GNK+DL+
Sbjct: 67 QERYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEFRSMAGAAVPMVVVGNKMDLQ 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
R V DAE+++ HF SAK N G++E+F EL++R A ++D
Sbjct: 127 TTRQVNARDAEEWSHGADCAHFVASAKDNTGVDEVFAELARR---AAHDYD 174
>gi|195455294|ref|XP_002074654.1| GK23050 [Drosophila willistoni]
gi|194170739|gb|EDW85640.1| GK23050 [Drosophila willistoni]
Length = 262
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKF--NEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KVV+LG VGKT +V++Y+++ NE + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVVVLGSRGVGKTRLVIKYMKNSLHRNESEVPTIAVSFFTCNIVLDQVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++
Sbjct: 67 ERFRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +++A +A S+GA +F TS++ +G+E++FL + ++ A E
Sbjct: 127 QRAVSRDEAYLFATSIGATYFETSSETEQGLEQVFLTTALGLVRLADE 174
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L + + IWDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQE 92
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+VYDIT +SF K + WVKEL+K D+ + + GNK DL ++
Sbjct: 93 RYAALAPLYYRGAGAAVVVYDITSAESFSKAQYWVKELQKHGSQDMVMALVGNKADLHEK 152
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
RTV +DA++YA+ TSAK I ++F E+++R+
Sbjct: 153 RTVSSQDAQEYAERNSMFFVETSAKTADNINQLFEEIAKRL 193
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 122/209 (58%), Gaps = 9/209 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTA 72
Y FK++L+G+ VGK+ ++LR+ E F++ ++T+ F K L GK + L IWDTA
Sbjct: 8 YLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQIWDTA 67
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERF + YYR ++G ++V+D+TDE+SF+ V +W+ E++ +C + GNK DL
Sbjct: 68 GQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTSWISEIENYASESVCKLLVGNKTDL 127
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
+QR V ++ AE+ AQ +G + TSAK +EE F+ +++ + + LAK S
Sbjct: 128 TEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEAFVMMTKEIRNRTGNLALAKG---S 184
Query: 193 RRGSMRRNV-VVVEDEDLPTSSSTKSGCC 220
G+ R V V E E + S GCC
Sbjct: 185 GAGTSRSGVDVRAETEQVSQS----GGCC 209
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++ I + IWDTAGQ
Sbjct: 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 62
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF +L P YYR + A++VYD+T SF K ++WVKEL + DI + + GNKID +
Sbjct: 63 ERFASLAPXYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDXLQ 122
Query: 135 ---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V +E+ EK A+ G + F TSAK + ++FL + +++
Sbjct: 123 EGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 23/228 (10%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + I G
Sbjct: 1 MGNEFD------YLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR +NG ++VYDITD +SF VK W+ E+ K + +
Sbjct: 55 KTIKLQIWDTAGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQWLSEIDKYANDSV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
C + GNK DL + R V A+ YA +G TSAK + +EE FL +S+ +
Sbjct: 115 CKLLVGNKCDLAESRVVDTSVAQAYADEIGIPFLETSAKDSINVEEAFLAMSEAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDL----PTSSSTKSGCCLT 222
K S+ +G++ R N+V ++ + + KS CC T
Sbjct: 170 -----KKSKAGSQGALERKASNLVQMKGQLIQQQQQQQQQNKSSCCST 212
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 133/219 (60%), Gaps = 19/219 (8%)
Query: 8 RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-AGKRLNL 66
R S+ FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + +++ +
Sbjct: 9 RPSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKF 68
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++ +I + +A
Sbjct: 69 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALA 128
Query: 127 GNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
GNK+DL +R + DA YA+ G + F TSAK + + E+F +++++
Sbjct: 129 GNKLDLVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKL------ 182
Query: 183 FDLAKASELSRRGSMRRNVVVVEDEDL-PTSSSTKSGCC 220
L +A + R + R V DL P S++T+ G C
Sbjct: 183 -PLDQAGPRNLRANPRPGV------DLRPESANTQGGAC 214
>gi|195026226|ref|XP_001986210.1| GH20651 [Drosophila grimshawi]
gi|193902210|gb|EDW01077.1| GH20651 [Drosophila grimshawi]
Length = 259
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 112/166 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGK+ +V++Y+++ + T+ SF + + ++ L IWDTAGQER
Sbjct: 7 KVVVLGSRGVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIILENVKIKLQIWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++ QR
Sbjct: 67 FRAVAPMYYRNANAAILVFDMTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQSQR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +++A +A S+GA +F TS + ++G+E++FL + ++ A E
Sbjct: 127 AVSRDEAYLFASSIGATYFETSTETDQGLEQVFLSTAMGLVRLADE 172
>gi|407407389|gb|EKF31210.1| ras-related protein rab-5, putative [Trypanosoma cruzi marinkellei]
Length = 226
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI- 59
M+A++ + T + K+VLLGE VGK+S+ LR+ ++F TT+ A+FL++ +N+
Sbjct: 1 MLASATPQAGCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVNVP 60
Query: 60 ----------AGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNW 109
A + IWDTAGQER+ +L PIYYR + GA++VYDIT DS +K + W
Sbjct: 61 NSSSSTQDSTACGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTW 120
Query: 110 VKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGA-VHFHTSAKMNRGIEEM 168
++EL+ + + + GNK DLE R V ED + AQ G F TSAK N IE +
Sbjct: 121 LRELRANADPTLAIFLLGNKKDLESLRQVSHEDGKALAQEEGVNGFFETSAKENENIELV 180
Query: 169 FLELSQRMLE 178
F+EL++ +LE
Sbjct: 181 FVELARTLLE 190
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 10/221 (4%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA S D Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + G
Sbjct: 1 MAKSYD------YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K++ L IWDTAGQERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+
Sbjct: 55 KKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM---LE 178
I GNK D+E++R V +E E+ A G TSAK N +EE F L++ + E
Sbjct: 115 DRMIIGNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTE 174
Query: 179 KA-QEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSG 218
+A QE ++ + R++ + D ++++ +G
Sbjct: 175 RASQEHTTQNTGRITVHQTPRKSSSLFSDRQSSSATTNDAG 215
>gi|74834410|emb|CAI44538.1| rab_B23 [Paramecium tetraurelia]
Length = 206
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 7/206 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG+ VGK+S+VLR+ D F H +TL A+F+ + + + G IWDTAGQE+
Sbjct: 6 KVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEK 65
Query: 77 FHALGPIYYR-MSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+ +L P+YYR ++ A++VYDIT +DSF+ +K+WV ELK I + GNK DL +
Sbjct: 66 YKSLTPLYYRGLAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIED 125
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML-EKAQEFDLAKASELSRR 194
V ++A YAQ +GA TS K N+GI+E+F+ +++++L E+ + K + +
Sbjct: 126 EKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKVDKPQN 185
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
S+R V +D GCC
Sbjct: 186 ASVR-----VTADDQTKKKKKDGGCC 206
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 20/224 (8%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M+N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + + G
Sbjct: 1 MSNEFD------YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR ++G ++VYDITD +SF K W+ E+ + + +
Sbjct: 55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNAKQWLSEIDRYANDSV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
C + GNK DL + RTV A+ YA+ +G TSAK + +EE FL +S +
Sbjct: 115 CKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDLPTSSSTKSGCCLT 222
K S+ + ++ R N+V ++ + + KS CCLT
Sbjct: 170 -----KKSKAGSQAALERKPSNIVQMKGQPI-QQEQQKSRCCLT 207
>gi|392597767|gb|EIW87089.1| GTP-binding protein RAB5 [Coniophora puteana RWD-64-598 SS2]
Length = 224
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 17/182 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW----- 69
FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIWYVSNK 66
Query: 70 -----------DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
DTAGQER+ +L P+YYR +N AV+VYDIT S EK + W++EL++
Sbjct: 67 SPATYSSIFDRDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQAD 126
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
I + + GNK DL +R V QE+A+KYA+ G + TSAK G+ E+F +++++
Sbjct: 127 PSIVIALCGNKTDLSARRQVTQEEAQKYAEEEGLMWGETSAKSGEGVSEIFTAIAKKLPT 186
Query: 179 KA 180
A
Sbjct: 187 TA 188
>gi|340380299|ref|XP_003388660.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 163
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KV LLG+ VGKTS+V R+V D F++ TTL ASF++K L + + IWDTAGQER
Sbjct: 7 KVCLLGDVGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQIWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR + A++VYDIT+E SF +++W+ EL ++ +I L IAGNK DLE +R
Sbjct: 67 YRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDWIAELHRLGPPNIVLAIAGNKCDLEDKR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+ + YA V A+ TSA R +EEMF+E+S+
Sbjct: 127 E-LNKVRLIYASEVNAIFGETSALTARNVEEMFIEISE 163
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK DL + R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ + LS+R +
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQAGMVLSQRPN 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|299117133|emb|CBN75097.1| Rab50, RAB family GTPase [Ectocarpus siliculosus]
Length = 226
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWD 70
++ FKVV+LG+ VGKT +VLR++E F K +T+ A FL K++ G + IWD
Sbjct: 9 TSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWD 68
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNK 129
TAGQERF A+ P+YYR + AV+ +DI DE+SF+K+K+WV+EL+ + + L IA K
Sbjct: 69 TAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTK 128
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
D+E +R V + AE +A VG + TSAK N G+ E+F + R +E
Sbjct: 129 TDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAME 177
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ +D+ I GNK D+E
Sbjct: 67 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
++R V ++ E+ A G TSAK N I+E F L++ + K ++ ++ A+
Sbjct: 127 ERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAAT 182
>gi|401837860|gb|EJT41716.1| YPT53-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 220
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 130/226 (57%), Gaps = 18/226 (7%)
Query: 6 LDRNSS--STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D N++ T + K+VLLGE VGK+S+VLR++ + F E T+ A+FL K++ K
Sbjct: 1 MDTNTAGIPTLTIKLVLLGESAVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRDDKA 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+DIT+E SF K ++WV+EL + LG++I +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQDWVEELHEKLGDNIII 120
Query: 124 TIAGNKIDLE------KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ GNK+DL R V +++ + Q ++F SAK + I E+F + +++
Sbjct: 121 ALVGNKMDLLTMQGEISNRAVNEDEIQNLCQQENLLYFEVSAKTGKNIHEVFQAVGEKI- 179
Query: 178 EKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCLTG 223
++ + SE ++ + +D+ + S+T G TG
Sbjct: 180 -PFPTHNVGRTSE--------HDLTITDDQRIDLESTTVEGARETG 216
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+GE VGKT V+ R+ +D FN I+T+ F + + + K++ L IWDTAG
Sbjct: 8 YLFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKIKLQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G ++VYDIT+ SF+ VKNW+K +++ D+ L + GNK D+E
Sbjct: 68 QERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIEENASEDVELMLLGNKCDME 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+ R V +E EK A G TSAK N +EE F +L++ + +K + L R
Sbjct: 128 ESRAVSKEQGEKLASDYGIPFLETSAKANINVEEAFFQLARNIKKKMDSKRRGEVLRLYR 187
Query: 194 R 194
R
Sbjct: 188 R 188
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 24/230 (10%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R+ + + K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + +
Sbjct: 1 MSRHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + +
Sbjct: 61 YEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDIIIAL 120
Query: 126 AGNKIDLEKQ---------------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFL 170
GNK DL + R V +E+ + A G + F TSAK + + ++F+
Sbjct: 121 VGNKYDLVEDEPELESAAEGNTDLLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFV 180
Query: 171 ELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ ++ E +L++ ++ S R ++ P + +T+S CC
Sbjct: 181 AIGGKI----PETNLSRGAQESTNEGGR-----IDLSTNPNAGATRSTCC 221
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + +++ GK++ L +WDTAGQE
Sbjct: 99 FKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQE 158
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 159 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 218
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 219 RKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKS 263
>gi|256078265|ref|XP_002575417.1| rab5 [Schistosoma mansoni]
gi|353230408|emb|CCD76579.1| putative rab5 [Schistosoma mansoni]
Length = 179
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKK--LNIAGKRLNLAIWDTA 72
S K+V+LGE VGK+S+VLR V+ +F+E T+ A++L + LN + IWDTA
Sbjct: 6 SHKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAAYLTQTIVLNDPPATVKFEIWDTA 65
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+H+L P+YYR + AV+VYDIT+++SFE+ K+W+ EL++ + +AGNK+DL
Sbjct: 66 GQERYHSLAPMYYRGAQAAVVVYDITNQNSFERAKSWINELQEKANTSGVIALAGNKVDL 125
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF 169
E QR V E+A++YA + TSAK++ + E+F
Sbjct: 126 EGQRAVSFEEAQEYADKNRLLFMETSAKISTNVSELF 162
>gi|348678129|gb|EGZ17946.1| hypothetical protein PHYSODRAFT_545378 [Phytophthora sojae]
Length = 224
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 16/218 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI-----AGKRLNLAIWDT 71
K+V++G VGKTS+ +RY F+ T+ ASFL K++ + A ++L L IWDT
Sbjct: 9 KLVIIGPTDVGKTSITMRYCHGSFSTPTSATIGASFLQKRVIVGDDAGARRKLTLQIWDT 68
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF ++ P+YYR + A+LV+D+ E SFEK+K W+++L+ +G+DI L + GNK D
Sbjct: 69 AGQERFRSMAPMYYRNAKAAILVFDLQSEASFEKIKEWLQDLQHHVGDDIVLAVVGNKSD 128
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE- 190
+ T A+++A +GA+ F TSAK G++ +F L+ ++L+K + +A +
Sbjct: 129 VPS--TFDFSKAQQFADEIGALVFRTSAKSGEGVQALFESLAVQLLKKHDQEQRTRARDG 186
Query: 191 --------LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
G ++ V++ + + ++K GCC
Sbjct: 187 SRAGSSAGAGSYGYGGQSPVILSQANASGNKASKGGCC 224
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VL +V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E+++R L +A
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKR---------LPRAQPTQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGARAASCC 199
>gi|71665955|ref|XP_819942.1| ras-related protein rab-5 [Trypanosoma cruzi strain CL Brener]
gi|58198651|gb|AAW65974.1| Rab GTPase protein 5 [Trypanosoma cruzi]
gi|70885265|gb|EAN98091.1| ras-related protein rab-5, putative [Trypanosoma cruzi]
Length = 226
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 20/232 (8%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M+A++ T + K+VLLGE VGK+S+ LR+ ++F TT+ A+FL++ +++
Sbjct: 1 MIASATPHAGCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVSVP 60
Query: 61 GKR-----------LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNW 109
+ IWDTAGQER+ +L PIYYR + GA++VYDIT DS +K + W
Sbjct: 61 NSSSSTQDSTAFGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTW 120
Query: 110 VKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGA-VHFHTSAKMNRGIEEM 168
++EL+ + + + GNK DLE R V ED + AQ G F TSAK N IE +
Sbjct: 121 LRELRANADPTLAIFLLGNKKDLESLRQVSHEDGKALAQEEGVNGFFETSAKENENIELV 180
Query: 169 FLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
F+EL++ +LE + RG+ R + P+ S SG C
Sbjct: 181 FVELARTLLEHGLASSSSAGGVGGTRGAKRL--------EPPSRPSKTSGTC 224
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 4 NSLDRNSSSTYS----FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
N++ ++S+T S K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L +
Sbjct: 16 NNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLAL 75
Query: 60 AGKRL-NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+ IWDTAGQER+ AL P+YYR + AV+VYDIT +SF K + WVKEL+K
Sbjct: 76 EDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGS 135
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DI + + GNK DL K R V ++A++YA+ V TSAK I ++F E+++R+
Sbjct: 136 PDIIMVLVGNKADLHKNRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRL 193
>gi|224054094|ref|XP_002191412.1| PREDICTED: ras-related protein Rab-17 [Taeniopygia guttata]
Length = 213
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 126/210 (60%), Gaps = 15/210 (7%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+Y +KVVLLG VGK+S+ RYV+ F E + T+ SF + LN+ + IWDT
Sbjct: 16 PSYMYKVVLLGSMSVGKSSLAYRYVKSDFREL-LPTVGCSFFTQILNLEEATVKFEIWDT 74
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKEL-KKMLGNDICLTIAGNKI 130
AGQE++ ++ +YYR ++ A+LVYDI ++ +F + K W++EL KK L ++I + + GNK
Sbjct: 75 AGQEKYQSVCHLYYRDAHAALLVYDIANKQTFSRAKLWLEELEKKFLPDEIVIALVGNKT 134
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DL +R V E+ E +A++ G + TSAK N + ++F+ + Q +L + +E KAS+
Sbjct: 135 DLAAEREVTTEEGEDFARTKGLLFMETSAKSNHQVNDLFMAIVQELLRREKE----KASK 190
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S G + ++ +SST +GCC
Sbjct: 191 PSPHGKVTVDL---------RASSTSTGCC 211
>gi|323303236|gb|EGA57034.1| Ypt53p [Saccharomyces cerevisiae FostersB]
Length = 220
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 114/179 (63%), Gaps = 8/179 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+T+E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK+DL E + M+ A + + ++F SAK I ++F L +++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKV 179
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 108/165 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + +++ GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKS 173
>gi|195122072|ref|XP_002005536.1| GI19016 [Drosophila mojavensis]
gi|193910604|gb|EDW09471.1| GI19016 [Drosophila mojavensis]
Length = 259
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 112/166 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGK+ +V++Y+++ + T+ SF + + ++ L IWDTAGQER
Sbjct: 7 KVVVLGSRGVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIMLDDVKIKLQIWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+DL+ QR
Sbjct: 67 FRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDLQSQR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +++A +A S+GA +F TS + ++G+E++FL + ++ A E
Sbjct: 127 AVSRDEAYLFASSIGATYFETSTETDQGLEQVFLSTALGLVRLADE 172
>gi|45184648|ref|NP_982366.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|44979994|gb|AAS50190.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|374105564|gb|AEY94475.1| FAAL176Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 130/214 (60%), Gaps = 20/214 (9%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR---LNLAIWDTA 72
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + +A + IWDTA
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLADHDDAMIKFEIWDTA 63
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKID 131
GQER+ +L P+YYR +N A++VYD+T EDS K ++WV ELK +G+ D+ + + GNK+D
Sbjct: 64 GQERYKSLAPMYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDEDLVIFLVGNKLD 123
Query: 132 LE----KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
L K R + E+A+ YA++ G + SAK GI ++F + ++ E+ +E LA
Sbjct: 124 LVDEDCKPRVIDSEEAQAYAEAHGLMFHEVSAKTGTGILDVFQGIGGKLYEQRRE-SLAA 182
Query: 188 ASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCCL 221
+ S ++R PT++ S CC+
Sbjct: 183 QPQHSSSIQLQR----------PTTNDATS-CCV 205
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 17/204 (8%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F + +T+ A+FL + L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ +SF + K WV+EL++ ++ + +AGNK DL +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANLVMALAGNKADLAAKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
+ ++ + YA G TSAK + E+F E++ R L KAQ +
Sbjct: 132 KIETQEGQSYADENGLFFMETSAKTAENVNELFYEIA-RKLPKAQP-------------A 177
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
+ +V+ D + T KS CC
Sbjct: 178 QQNTGMVLTDRPIETK---KSACC 198
>gi|224070895|ref|XP_002303285.1| predicted protein [Populus trichocarpa]
gi|222840717|gb|EEE78264.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 18/207 (8%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GKTS+VLR+V+ +F + T+ A+F + L++ + IWDTAGQER
Sbjct: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVKFDIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + AV+VYDI+ D+F + K WV+EL++ + + + NK+DL+ +R
Sbjct: 72 YHSLAPMYYRGAAAAVIVYDISSMDTFVRAKRWVQELQRQGNPKMVMALVANKLDLDSKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V ED E+++Q G TSAK + I E+F E+++R LAKA G
Sbjct: 132 EVQNEDGEQFSQENGMFFMETSAKTAQNINELFYEIAKR---------LAKAYPSKSTG- 181
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCCLTG 223
V + DE T S T++ C +G
Sbjct: 182 -----VNLNDE---TESRTRNLFCCSG 200
>gi|194381626|dbj|BAG58767.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 122/205 (59%), Gaps = 26/205 (12%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ F IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGVKF--------------EIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 182
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T++ CC
Sbjct: 183 ---RGVDLTE----PT-QPTRNQCC 199
>gi|401841965|gb|EJT44266.1| YPT52-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 234
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 122/201 (60%), Gaps = 29/201 (14%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA-------- 67
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I N A
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNGAKDVVIKFE 63
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIA 126
IWDTAGQER+ +L P+YYR +N A++VYDIT EDS +K +NWV ELK +G +D+ + +
Sbjct: 64 IWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLL 123
Query: 127 GNKIDL--------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
GNK+DL +K R + E+A++YAQ G + SAK GI+
Sbjct: 124 GNKVDLCQDMPGSETIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIK 183
Query: 167 EMFLELSQRMLEKAQEFDLAK 187
E+F E+ +++ + ++ L+K
Sbjct: 184 EIFQEIGEKLYDSKKDEILSK 204
>gi|398364899|ref|NP_014306.3| Ypt53p [Saccharomyces cerevisiae S288c]
gi|549797|sp|P36019.1|YPT53_YEAST RecName: Full=GTP-binding protein YPT53
gi|19880864|gb|AAM00516.1|AF458969_1 YPT53 [Saccharomyces cerevisiae]
gi|19880871|gb|AAM00522.1|AF458970_1 YPT53 [Saccharomyces cerevisiae]
gi|19880878|gb|AAM00528.1|AF458971_1 YPT53 [Saccharomyces cerevisiae]
gi|19880885|gb|AAM00534.1|AF458972_1 YPT53 [Saccharomyces cerevisiae]
gi|19880906|gb|AAM00552.1|AF458975_1 YPT53 [Saccharomyces cerevisiae]
gi|19880913|gb|AAM00558.1|AF458976_1 YPT53 [Saccharomyces cerevisiae]
gi|19880920|gb|AAM00564.1|AF458977_1 YPT53 [Saccharomyces cerevisiae]
gi|19880927|gb|AAM00570.1|AF458978_1 YPT53 [Saccharomyces cerevisiae]
gi|19880934|gb|AAM00576.1|AF458979_1 YPT53 [Saccharomyces cerevisiae]
gi|19880941|gb|AAM00582.1|AF458980_1 YPT53 [Saccharomyces cerevisiae]
gi|19880948|gb|AAM00588.1|AF458981_1 YPT53 [Saccharomyces cerevisiae]
gi|483436|emb|CAA53771.1| ypt53p [Saccharomyces cerevisiae]
gi|758295|emb|CAA59824.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1301998|emb|CAA95969.1| YPT53 [Saccharomyces cerevisiae]
gi|45270730|gb|AAS56746.1| YNL093W [Saccharomyces cerevisiae]
gi|71064107|gb|AAZ22515.1| Ypt53p [Saccharomyces cerevisiae]
gi|151944442|gb|EDN62720.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190409081|gb|EDV12346.1| GTP-binding protein YPT53 [Saccharomyces cerevisiae RM11-1a]
gi|207341718|gb|EDZ69697.1| YNL093Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149269|emb|CAY82511.1| Ypt53p [Saccharomyces cerevisiae EC1118]
gi|285814559|tpg|DAA10453.1| TPA: Ypt53p [Saccharomyces cerevisiae S288c]
gi|323335804|gb|EGA77083.1| Ypt53p [Saccharomyces cerevisiae Vin13]
gi|365763318|gb|EHN04847.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296898|gb|EIW07999.1| Ypt53p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 220
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 114/179 (63%), Gaps = 8/179 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+T+E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK+DL E + M+ A + + ++F SAK I ++F L +++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKV 179
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 116/213 (54%), Gaps = 16/213 (7%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S KV LLG+ VGK+ +V R+V D FN T+ A+F+ K + + K IWDT
Sbjct: 9 SIRELKVCLLGDAGVGKSCLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAYKFNIWDT 68
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF +L P+YYR + A+LVYDIT E +F ++ W++EL++ DI + +AGNK D
Sbjct: 69 AGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCD 128
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
QR V +DA+ +A SV A+ TSA ++ + +F EL +++ + E
Sbjct: 129 KADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELCKKLPHENMEVPY----HH 184
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSG-CCLTG 223
+ G+ R P KSG CC +G
Sbjct: 185 KKIGTFR-----------PEERPNKSGNCCSSG 206
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 106/164 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + + I GKR+ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E AE+ A+ F TSAK + ++E F L++ +L K
Sbjct: 129 RKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ +SF + K WV+EL+K ++ + AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G TSAK + ++F E++++ L +A
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKK---------LPRAQPAQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P + + CC
Sbjct: 183 M---VLV----DRPAEGTRAASCC 199
>gi|328766761|gb|EGF76814.1| hypothetical protein BATDEDRAFT_37534 [Batrachochytrium
dendrobatidis JAM81]
Length = 245
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLGE VGK+S+VLR+V ++F E T+ A+FL +K + K + IWDTAGQER
Sbjct: 38 KLVLLGEAAVGKSSLVLRFVNNEFQENKEPTIGAAFLTQKCRLDDKIIKFEIWDTAGQER 97
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK-Q 135
FH+L P+YYR + AV+ YDIT S EK K WVKEL++ +I + + GNK+DL
Sbjct: 98 FHSLAPMYYRNAQAAVVAYDITKPASLEKAKAWVKELQRQANPNIVIALVGNKLDLAATA 157
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+A YA G + SAK + ++F ++++++
Sbjct: 158 RGVSTEEARAYATEGGLLFLEASAKTGEFVMDIFTDIAKKI 198
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 114/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ + R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMIEAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YAQ G TSAK + ++F E+++R+L+ Q + L++R +
Sbjct: 133 QVPAEEARTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQNTPAGMVLNQRPA 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 104/158 (65%)
Query: 19 VLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFH 78
VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER+H
Sbjct: 1 VLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 60
Query: 79 ALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTV 138
+L P+YYR + A++VYDIT++ SF++ K WV+EL+ ++ + +AGNK DL R V
Sbjct: 61 SLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKV 120
Query: 139 MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
EDA+ YAQ G TSAK + ++F E+++R+
Sbjct: 121 AAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRL 158
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT DSF + K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
V E+A YA+ G TSAK + ++F E++ + ++AQ
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIA-KSYQRAQ 175
>gi|410083613|ref|XP_003959384.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
gi|372465975|emb|CCF60249.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
Length = 209
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 111/171 (64%), Gaps = 4/171 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++NI + IW
Sbjct: 2 SNPITSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINNNTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKDIIIALVGNK 121
Query: 130 IDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+D+ E +R V +E+ E+ A+ G + F TSAK + ++FL + +++
Sbjct: 122 VDIIENDESERKVAREEGERLAEEEGLIFFETSAKTAENVNDVFLNIGEKI 172
>gi|6322866|ref|NP_012939.1| Ypt52p [Saccharomyces cerevisiae S288c]
gi|549796|sp|P36018.1|YPT52_YEAST RecName: Full=GTP-binding protein YPT52
gi|483599|emb|CAA53770.1| ypt52p [Saccharomyces cerevisiae]
gi|486429|emb|CAA82086.1| YPT52 [Saccharomyces cerevisiae]
gi|151941558|gb|EDN59921.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409836|gb|EDV13101.1| GTP-binding protein YPT52 [Saccharomyces cerevisiae RM11-1a]
gi|207343416|gb|EDZ70879.1| YKR014Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272630|gb|EEU07608.1| Ypt52p [Saccharomyces cerevisiae JAY291]
gi|259147845|emb|CAY81095.1| Ypt52p [Saccharomyces cerevisiae EC1118]
gi|285813272|tpg|DAA09169.1| TPA: Ypt52p [Saccharomyces cerevisiae S288c]
gi|323304136|gb|EGA57914.1| Ypt52p [Saccharomyces cerevisiae FostersB]
gi|323308216|gb|EGA61465.1| Ypt52p [Saccharomyces cerevisiae FostersO]
gi|323332610|gb|EGA74016.1| Ypt52p [Saccharomyces cerevisiae AWRI796]
gi|323336757|gb|EGA78021.1| Ypt52p [Saccharomyces cerevisiae Vin13]
gi|323347623|gb|EGA81888.1| Ypt52p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579576|dbj|GAA24738.1| K7_Ypt52p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764667|gb|EHN06189.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298155|gb|EIW09253.1| Ypt52p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 234
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 35/208 (16%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN--------LA 67
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I N
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFE 63
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIA 126
IWDTAGQER+ +L P+YYR +N A++VYDIT EDS +K +NWV ELK +G +D+ + +
Sbjct: 64 IWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLL 123
Query: 127 GNKIDL--------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
GNK+DL +K R + E+A++YAQ G + SAK G++
Sbjct: 124 GNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVK 183
Query: 167 EMFLELSQRMLEKAQEFDLAKASELSRR 194
E+F ++ +++ +DL K LS++
Sbjct: 184 EIFQDIGEKL------YDLKKDEILSKQ 205
>gi|449664040|ref|XP_002167518.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Hydra magnipapillata]
Length = 225
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 118/204 (57%), Gaps = 13/204 (6%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
+V+ LGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + IWDTAGQER
Sbjct: 34 QVIFLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCFDDTTVKFEIWDTAGQER 93
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR S A++VYDIT+ D F +V + L +I +++AGNK DL +R
Sbjct: 94 YHSLAPMYYRGSQAAIVVYDITNTDLFAQVLHXAGCLAXXXXCNIVISLAGNKADLGNKR 153
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YA+ G + TSAK + E+FL +++++ + + G
Sbjct: 154 MVDYEEAHAYAEENGLLFMETSAKTASNVNELFLAIAKKLPK--------NTDQPGPGGP 205
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
RR + + E+ + P KSGCC
Sbjct: 206 SRRGIELTENPEPP-----KSGCC 224
>gi|323346892|gb|EGA81171.1| Ypt53p [Saccharomyces cerevisiae Lalvin QA23]
Length = 182
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 8/178 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+T+E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQR 175
+ GNK+DL E + M+ A + + ++F SAK I ++F L ++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEK 178
>gi|301097172|ref|XP_002897681.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262106702|gb|EEY64754.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 224
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 30/225 (13%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-----KRLNLAIWDT 71
K+V++G VGKTS+ +RY F+ T+ ASFL K++ + ++L L IWDT
Sbjct: 9 KLVIIGPTDVGKTSITMRYCHGSFSTPTSATIGASFLQKRVIVGDDSGTRRKLTLQIWDT 68
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF ++ P+YYR + A+LV+D+ E SFEK+K W+++L+ +G+DI L + GNK D
Sbjct: 69 AGQERFRSMAPMYYRNAKAAILVFDLQSEASFEKIKEWLQDLQHHVGDDIVLAVVGNKSD 128
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
+ + A+++A +GA+ F TSAK G++ +F L+ ++L+K + E
Sbjct: 129 VTSNFDFAK--AQQFADEIGALVFRTSAKTGEGVQSLFESLAVQLLKKHDQ-------EQ 179
Query: 192 SRRG----------------SMRRNVVVVEDEDLPTSSSTKSGCC 220
RRG ++ V++ + + S+K GCC
Sbjct: 180 RRRGRDGSRAGSAAGAGSYGYGGQSPVILSHTNTTGNKSSKGGCC 224
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Query: 8 RNSSSTYS--FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
R S Y K++L+G+ VGK+ ++LR+VEDKFN ITT+ F + + I GKR+
Sbjct: 4 RTPSRAYDSILKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRIK 63
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
L +WDTAGQERF + YYR + G +LVYD+TDE +FE V+NW + + + D L +
Sbjct: 64 LQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHANEDTQLIL 123
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
GNK D + R V E E AQ +G SAK N ++E+F +L++ + E
Sbjct: 124 VGNKNDEKDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQE 176
>gi|395334748|gb|EJF67124.1| GTP-binding protein RAB5 [Dichomitus squalens LYAD-421 SS1]
Length = 209
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 122/192 (63%), Gaps = 10/192 (5%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK K+W++EL++ +I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPNIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
+DL +R V QE+A+KYA+ G + TSAK G+ ++F ++++ L +
Sbjct: 122 LDLSARRQVSQEEAKKYAEEEGLMWGETSAKTGEGVSDIFTSIAKK---------LPLTA 172
Query: 190 ELSRRGSMRRNV 201
S RG R V
Sbjct: 173 PPSARGGTRPGV 184
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S KVV+LG+ VGKTS++ R+ F+E TTL ASF+ K L K IWD
Sbjct: 2 SKARDIKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQE++ +L P+YYR ++ A++VYDIT+ SF+ +K WV+EL++ +I + + GNK+
Sbjct: 62 TAGQEKYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKV 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
DL + V ++A++YA + A+ +TSAK N+ IE +F++++ EK ++ D+
Sbjct: 122 DLIDREDVKYDEAKQYANELNAIFQYTSAKENQNIESLFIQIA----EKEEQKDINPTKP 177
Query: 191 LSRRG 195
S +G
Sbjct: 178 QSNKG 182
>gi|397511745|ref|XP_003826227.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pan paniscus]
Length = 202
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 122/205 (59%), Gaps = 25/205 (12%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ F IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGVKF--------------EIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ YA + TSAK + + E+F+ +++++ + + A S RG
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGAN----SARG 182
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T++ CC
Sbjct: 183 --RGGVDLTE----PT-QPTRNQCC 200
>gi|307177872|gb|EFN66832.1| Ras-related protein RabJ [Camponotus floridanus]
Length = 217
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVVLLG VGKTS++ RY+ + N T+ ASF N KLN+ ++ L +WDTAGQER
Sbjct: 7 KVVLLGSQGVGKTSLIGRYIGNFDNVS--PTIGASFFNCKLNLGDMKIKLHVWDTAGQER 64
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LV+D+T +SF +K WVKEL++ + + + L + GNK DL QR
Sbjct: 65 FRSMAPMYYRNANAAMLVFDLTQYNSFAAIKGWVKELQQNVEDTMVLAVIGNKSDLH-QR 123
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
V E+ +KYA S+GA + S N G+E +FL +++ +L
Sbjct: 124 QVDGEEGQKYATSIGATYHEISVLHNEGVETVFLAIAKGLL 164
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 14/211 (6%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y K++L+G+ VGK+ ++LR+ +D F ITT+ F + + GKR+ L IWDTAG
Sbjct: 14 YLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQIWDTAG 73
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL- 132
QERF + YYR + G +LVYD+TDE SF ++NW+K +++ +++ + GNK D+
Sbjct: 74 QERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQHASDNVNKILVGNKADMD 133
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
E +R V ++ A G F TSAK N +E+ F +++ ++++ E D A +
Sbjct: 134 ESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKRLSETDFRPAPQ-- 191
Query: 193 RRGSMRRNVVVVEDEDL---PTSSSTKSGCC 220
+ + + + P S+S+KS CC
Sbjct: 192 --------TITINNPNTAEGPASASSKSRCC 214
>gi|367012131|ref|XP_003680566.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
gi|359748225|emb|CCE91355.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
Length = 211
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 134/219 (61%), Gaps = 20/219 (9%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+SS S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++NI + + IW
Sbjct: 2 NSSITSVKLVLLGEAAVGKSSIVLRFVSNDFTENKEPTIGAAFLTQRVNIGDETVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL + I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIIIALVGNK 121
Query: 130 IDL---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM-LEKAQEFDL 185
ID+ ++R V +E+AEK A+ ++F TSAK + E+FL + +++ L+KA++
Sbjct: 122 IDVLESGEERKVAREEAEKLAEEENLLYFETSAKTGENVNEVFLAIGEKIPLKKAED--- 178
Query: 186 AKASELSRRGSMRRNVVVVEDEDLPTSSSTK-----SGC 219
+ + + + + +D+ + +SST SGC
Sbjct: 179 --------QANQQHGLRITDDQRIDLASSTNGPVKASGC 209
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA S D Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + G
Sbjct: 1 MAKSYD------YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K++ L IWDTAGQERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+
Sbjct: 55 KKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
I GNK D+E++R V +E E+ A G TSAK N +EE F L++
Sbjct: 115 DRMIIGNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLAR 167
>gi|349580845|dbj|GAA26004.1| K7_Ypt53p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 220
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+T+E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK+DL E + M+ A + ++F SAK I ++F L +++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMEAPAVQNLCDRENLLYFEASAKTGENIYQIFQTLGEKV 179
>gi|409051991|gb|EKM61467.1| hypothetical protein PHACADRAFT_248102 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + G + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVALEDGTSVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ + P+YYR +N AV+VYDIT S EK ++W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSSAPMYYRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V QE+A+KYA+ G + TSAK G+ E+F E+++++ + A A
Sbjct: 122 SDLAVRRQVSQEEAKKYAEEEGLMWGETSAKSGEGVNEIFTEIAKKLPKTAPPSARAGG- 180
Query: 190 ELSRRGSMRRNV 201
+R G+ R V
Sbjct: 181 --ARTGAARTGV 190
>gi|196003396|ref|XP_002111565.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
gi|190585464|gb|EDV25532.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
Length = 163
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 106/157 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+ LLG+ VGK+S+VLR+V D FN +T+ ASF++K + + + IWDTAGQE+
Sbjct: 7 KLCLLGDAGVGKSSLVLRFVCDTFNACSESTIGASFMSKTIEVNEQSYKYQIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ L P+YYR + A++V+DIT E+SF +K+WVKEL+++ ++ + IAGNK DL++ R
Sbjct: 67 YRGLAPMYYRGAAAAIVVFDITREESFHTLKDWVKELQQLGPPNLVMAIAGNKSDLDEMR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
V DA +A SV A+ TSA + + E+F+E+S
Sbjct: 127 EVSSHDARTFADSVDALFAETSALTAKNVLELFVEIS 163
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 119/184 (64%), Gaps = 5/184 (2%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
T FK+VLLG+ VGK+ +V+R+ +D+F E +T+ A+F+ + +++ + IWDTA
Sbjct: 41 TLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDTA 100
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND---ICLTIAGNK 129
GQER+ +L P+YYR + AV+VYDI++ DSF+ K+WV+EL+ + ND + + +AGNK
Sbjct: 101 GQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQTV--NDRSNVVIALAGNK 158
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V +++A++YA G + TSAK + E+F E++ + + +E D
Sbjct: 159 EDLGAERQVPKQEAQQYADEHGILFIETSAKTGHNVNELFYEIAAALPKSRKEHDPHAGF 218
Query: 190 ELSR 193
+L++
Sbjct: 219 QLNK 222
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 97/156 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+ LLG+ VGK+S+V R+V D FN T+ ASF++K L + + IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ L P+YYR + A++VYDIT E SF VK WV+EL++ D+ L IAGNK DL QR
Sbjct: 67 YRGLAPMYYRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKADLVDQR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
V ++A KYA + A TSAK + ++F +
Sbjct: 127 EVTYDEAHKYADQINATFVETSAKTAVNVTQLFTAI 162
>gi|110761970|ref|XP_001122072.1| PREDICTED: ras-related protein RabJ-like [Apis mellifera]
Length = 221
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 102/162 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV LG VGKTS+++RY+ NE T+ ASF KLN+ R+ L +WDTAGQER
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLNPTIGASFFTCKLNVENARIMLRVWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LV+D+T ++F +K WV EL++ + + L + GNK DL K+R
Sbjct: 67 FKSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKER 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V E+ YA +GA + TS N GI+ +FL + +L+
Sbjct: 127 QVDAEEGRVYATKIGASYHETSVLQNEGIKNVFLAIGSGLLK 168
>gi|195384265|ref|XP_002050838.1| GJ19978 [Drosophila virilis]
gi|194145635|gb|EDW62031.1| GJ19978 [Drosophila virilis]
Length = 260
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 112/166 (67%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGK+ +V++Y+++ + T+ SF + + ++ L IWDTAGQER
Sbjct: 7 KVVVLGSRGVGKSRLVIKYIKNALHRTEEPTIAVSFFTCNIILDDVKIKLQIWDTAGQER 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + LT+ GNK+D++ QR
Sbjct: 67 FRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQSQR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
V +++A +A S+GA +F TS + ++G+E++FL + ++ A E
Sbjct: 127 AVSRDEAHLFAISIGATYFETSTETDQGLEQVFLSTALGLVRLADE 172
>gi|168014172|ref|XP_001759627.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162689166|gb|EDQ75539.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|167832326|dbj|BAG09233.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 208
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQ 74
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQ
Sbjct: 33 IKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTITLKDSTSVKFEIWDTAGQ 92
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR + AV+VYDIT+ ++F K + WVKEL+K DI + + GNK DLE
Sbjct: 93 ERYASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLEY 152
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
QR V +E+A+ YA S G + TSAK + + ++F +L ++
Sbjct: 153 QREVTREEAQTYADSNGMFYIETSAKTSDNVNQLFEQLHGKL 194
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKADMLDAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ Q L++R +
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKSAINVNDIFYEIAKRLLQGQQAPSPQAGMVLNQRPN 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 103/166 (62%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
++T KV LLG+ VGK+S++ R+V + FN +T+ ASF+ K L + + IWD
Sbjct: 5 NTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWD 64
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQER+ AL P+YYR + AV+VYDIT DSF V++WV+EL+ +I L IAGNK
Sbjct: 65 TAGQERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSWVRELQLHGEQNIALGIAGNKC 124
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DLE R V E YA GAV TSA I+E+F+ ++ ++
Sbjct: 125 DLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKV 170
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ ++ + + K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + +
Sbjct: 1 MSQHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + +
Sbjct: 61 YEIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIAL 120
Query: 126 AGNKIDL---------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
GNK+DL E R V E+ + A G + F TSAK + E+F+ + ++
Sbjct: 121 VGNKLDLVEDDSAEDGETLRKVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKI 180
Query: 177 LEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ ++ GS R + + + D +++ +S CC
Sbjct: 181 P------SVTVTGGEAQEGSNGRRIDLTANTD--NANAPRSTCC 216
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLGE VGK+S+VLR+V + F E T+ A+FL ++ I K + IWDTAGQER
Sbjct: 10 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEIWDTAGQER 69
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL---- 132
F +L P+YYR + A++VYDIT SF K ++W+KEL + DI + + GNK+D+
Sbjct: 70 FASLAPMYYRNAQAALVVYDITKPASFIKARHWIKELHEQASKDIIIALVGNKLDVVEED 129
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E R V E+ E A G + TSAK + ++E+F+ + Q++
Sbjct: 130 ESNRKVAYEEGETLANEEGLIFLETSAKTSFNVKEVFMNIGQKI 173
>gi|224134314|ref|XP_002321789.1| predicted protein [Populus trichocarpa]
gi|222868785|gb|EEF05916.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 20/219 (9%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA + ++N ++ K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L +
Sbjct: 1 MATTANKNINA----KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++VYDI+++ SFE+ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ +AGNK DL R V E + +AQ G TSAK + ++F E+++R+
Sbjct: 117 VMALAGNKADLLDARKVAAEATQVFAQENGLFFMETSAKTATNVNDIFYEIAKRL----- 171
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
S++ + V++ D PT + + CC
Sbjct: 172 -------SQVQPAPNPSGMVIM----DRPTERTASAACC 199
>gi|194755088|ref|XP_001959824.1| GF11842 [Drosophila ananassae]
gi|190621122|gb|EDV36646.1| GF11842 [Drosophila ananassae]
Length = 261
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFN--EKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KVV+LG VGKT +V+RY+++ + E + T+ SF + + ++ L IWDTAGQ
Sbjct: 7 KVVVLGSRGVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIFLDEVKIKLQIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ A+ P+YYR +N A+LV+D+T +F ++K+W++EL + + + + T+ GNK+D++
Sbjct: 67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMIFTLVGNKMDMQA 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
QR V +++A +A S+GA +F TS + ++G+E++FL + ++ A E
Sbjct: 127 QRAVSRDEAFVFATSIGATYFETSTETDQGLEQVFLSTALGLVRLADE 174
>gi|28866038|emb|CAD26971.1| Rab-related small GTP-binding protein [Simmondsia chinensis]
Length = 200
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 114/204 (55%), Gaps = 16/204 (7%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S++L +V+ F E +T+ A+F + L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLLLLFVKGHFLEFQESTIGAAFFSHTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H L P+YYR + A++VYDIT DSF K WV+EL+K ++ + +AGNK DLE +R
Sbjct: 72 YHILAPMYYRGAAAAIIVYDITSADSFALAKKWVQELQKQGNPNMVMALAGNKADLEDRR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
+V E+A YA+ G TSAK + E+F E+++R L +A
Sbjct: 132 SVPAEEARIYAEDNGLFFMETSAKTALNVNEIFYEIAKR---------LPRAQPPQNPAG 182
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
M V+V D P S S CC
Sbjct: 183 M---VLV----DRPPEGSRASTCC 199
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + IWDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ +SF + K WV+EL+K ++ + AGNK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
V E+A YA+ G TSAK + ++F E++++ L +AQ
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKK-LPRAQ 175
>gi|365759643|gb|EHN01421.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 234
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 29/201 (14%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA-------- 67
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I N A
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNGAKDVVIKFE 63
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIA 126
IWDTAGQER+ +L P+YYR +N A++VYDIT EDS +K +NWV ELK +G +D+ + +
Sbjct: 64 IWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLL 123
Query: 127 GNKIDL--------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
GNK+DL +K R + E+A++YAQ G + SAK GI+
Sbjct: 124 GNKVDLCQDMPGSETIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIK 183
Query: 167 EMFLELSQRMLEKAQEFDLAK 187
E+F ++ +++ + ++ L+K
Sbjct: 184 EIFQDIGEKLYDSKKDEILSK 204
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 69 ERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLVE 128
Query: 133 -----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
E R V E+ + A+ G + F TSAK + + ++F+ + ++ E A
Sbjct: 129 DDTEEESLRKVSVEEGKGLAEEEGLLFFETSAKTSYNVNDVFIGIGSKIPEAA 181
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 109/169 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G VGKT +V R+ + F T+ F+ K + I G+++ L IWDTAG
Sbjct: 8 YLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR +N +L YDIT EDSF + W++E+++ N + + GNKIDL
Sbjct: 68 QERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLA 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
++R V+++ AE +AQS ++ TSAK + +E++FL+L+ ++ +A++
Sbjct: 128 EKREVVRQRAEDFAQSQSMLYLETSAKESDNVEKLFLDLACELIREAKQ 176
>gi|407846705|gb|EKG02711.1| small G-protein, putative [Trypanosoma cruzi]
Length = 226
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 20/232 (8%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
M+A++ T + K+VLLGE VGK+S+ LR+ ++F TT+ A+FL++ +++
Sbjct: 1 MIASATPHAGCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVSVP 60
Query: 61 GKR-----------LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNW 109
+ IWDTAGQER+ +L PIYYR + GA++VYDIT DS +K + W
Sbjct: 61 NSSSSTQDSTAFGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTW 120
Query: 110 VKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGA-VHFHTSAKMNRGIEEM 168
++EL+ + + + GNK DLE R V +D + AQ G F TSAK N IE +
Sbjct: 121 LRELRANADPTLAIFLLGNKKDLESLRQVSHDDGKALAQEEGVNGFFETSAKENENIELV 180
Query: 169 FLELSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
F+EL++ +LE + RG+ R + P+ S SG C
Sbjct: 181 FVELARTLLEHGLASSSSAGGVGGTRGAKRL--------EPPSRPSKTSGTC 224
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 14/204 (6%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK+D+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++R+L+ + L++R
Sbjct: 133 HVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQAGIVLNQR-- 190
Query: 197 MRRNVVVVEDEDLPTSSSTKSGCC 220
DE + ++SS CC
Sbjct: 191 --------PDERMVSTSS----CC 202
>gi|358398111|gb|EHK47469.1| hypothetical protein TRIATDRAFT_298602 [Trichoderma atroviride IMI
206040]
Length = 229
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K N+ + + IWDTAGQ
Sbjct: 10 SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQ 69
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT S K ++WV EL++ I + + GNK+DL
Sbjct: 70 ERFASLAPMYYRNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIALVGNKLDLAG 129
Query: 133 EKQ--------------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
E Q R V E+A+ YA+ G + F TSAK + E+F ++ + E
Sbjct: 130 ESQSTSEEGDGEDGGDARKVPTEEAQSYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPE 189
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 15/210 (7%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S Y FK++L+G+ VGKT ++ R+ +D FN I+T+ F K + + GK++ L IWD
Sbjct: 5 SYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWD 64
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQERFH + YYR + G +LVYDIT E +F+ + W++ +++ D+ I GNK
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKC 124
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
D++ +R V +E E+ A+ G TSAK N IE+ F L+Q +L+K E
Sbjct: 125 DMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKK----------E 174
Query: 191 LSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
L++ N + V D+ K GCC
Sbjct: 175 LNKDSEEPSNNIHVHDQ-----KDKKGGCC 199
>gi|425765692|gb|EKV04360.1| RAB GTPase Ypt5, putative [Penicillium digitatum Pd1]
gi|425779183|gb|EKV17266.1| RAB GTPase Ypt5, putative [Penicillium digitatum PHI26]
Length = 242
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 115/186 (61%), Gaps = 25/186 (13%)
Query: 16 FKVVLLGEGCVGK--------------------TSVVLRYVEDKFNEKHITTLQASFLNK 55
FK+VLLGE VGK +S+VLR+V+D+F++ +T+ A+FL +
Sbjct: 18 FKLVLLGESAVGKVWDTTCDLLLSAADLTAIFQSSLVLRFVKDQFDDYRESTIGAAFLTQ 77
Query: 56 KLNIAGKR-LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELK 114
+++ + IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL+
Sbjct: 78 TISLDDTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQ 137
Query: 115 KMLGNDICLTIAGNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFL 170
+ +I + +AGNK+DL +R + + DAE YA+ G + F TSAK + ++E+F
Sbjct: 138 RQANENIVIALAGNKLDLVTESPDKRAIQEADAEAYAREAGLLFFETSAKSSTNVKELFT 197
Query: 171 ELSQRM 176
+++++
Sbjct: 198 AIAKKL 203
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 4 NSLDRNSSSTYS----FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
N++ ++S+T S K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L +
Sbjct: 16 NNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLAL 75
Query: 60 AGKRL-NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+ IWDTAGQER+ AL P+YYR + AV+VYDIT +SF K + WVKEL+K
Sbjct: 76 EDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGS 135
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DI + + GNK DL + R V ++A++YA+ V TSAK I ++F E+++R+
Sbjct: 136 PDIIMVLVGNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRL 193
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 119/203 (58%), Gaps = 8/203 (3%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLGE GKTS+V R+V D F + T+ FL+K + GK + L +WDTAGQER
Sbjct: 14 KIVLLGEQSAGKTSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQLWDTAGQER 73
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F +L P Y R S+ A++VYDIT+ DSF + K WV+E+K M G+ + I GNK DL +R
Sbjct: 74 FRSLMPSYIRDSSAAIVVYDITNRDSFTRTKQWVQEIKDMRGDKAVIVIVGNKTDLLDKR 133
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA-KASELSRRG 195
V E+ E +A+ + + TSAK + E+F ++ ++L+ + ++ K ++ +
Sbjct: 134 KVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKLLKTTEPEPVSDKLVDIDLKP 193
Query: 196 SMRRNVVVVEDEDLPTSSSTKSG 218
S V ED+ + TK+G
Sbjct: 194 S-------VPSEDVTCTGRTKAG 209
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 120/193 (62%), Gaps = 10/193 (5%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA S D + FK++L+G+ VGKT +++R+ ED F+ +I+T+ F + + + G
Sbjct: 1 MAKSYD------HLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
KR+ L +WDTAGQERF + YYR + G +LVYDITDE SFE ++NW+K +K+ +
Sbjct: 55 KRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ GNK D+E +R V ++ AEK + G F TSAK + +EE F L++ +L ++
Sbjct: 115 ERLLLGNKCDMEVKRKVSRDQAEKLCREHGIRFFETSAKSSLNVEEAFNTLARDILLRS- 173
Query: 182 EFDLAKASELSRR 194
+ K+++L +R
Sbjct: 174 ---IKKSAQLPKR 183
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
+MA + D Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + +
Sbjct: 14 VMAKTYD------YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVD 67
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
GK++ L IWDTAGQERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D
Sbjct: 68 GKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSD 127
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+ I GNK D+E++R V +E E+ A G TSAK N +EE F L++
Sbjct: 128 VDRMIIGNKCDVEERRQVSRERGEQLAIEYGTKFLETSAKANINVEEAFFTLAR 181
>gi|322795122|gb|EFZ17962.1| hypothetical protein SINV_05258 [Solenopsis invicta]
Length = 219
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 126/203 (62%), Gaps = 10/203 (4%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHIT-TLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KVV+LG VGKTS++ RY+ N +H + T+ ASF N K+N+ ++ L +WDTAGQE
Sbjct: 7 KVVMLGSQGVGKTSLIGRYLG---NFEHASPTIGASFFNCKINLDDMKIKLQVWDTAGQE 63
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF ++ P+YYR SN A+LV+D+T ++F +K+WVKEL++ + + L + GNK DL +Q
Sbjct: 64 RFRSMAPMYYRNSNAAMLVFDLTQYNTFAAIKSWVKELQQNVEETMVLALIGNKSDLVQQ 123
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE-FDLAKASELSRR 194
R V E+ ++YA ++GA + S N G+E +FL ++ + A + DL ++S
Sbjct: 124 RQVDGEEGQRYATTIGATYHEISVLHNEGVESVFLAIAMSLRRMASDNNDLNTTLKISDS 183
Query: 195 GSMRRNVVVVEDEDLPTSSSTKS 217
+ R+ D+ LP+ S +S
Sbjct: 184 NNFLRS-----DDMLPSPSVEES 201
>gi|326491951|dbj|BAJ98200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 18 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 77
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ F + K WV+EL+ + + +AGNK D+ + R
Sbjct: 78 YHSLAPMYYRGAAAAIVVYDITNAAPFTRAKKWVQELQAQGNPNTVMALAGNKADMLEAR 137
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A YAQ G TSAK + ++F E+++R+L Q + LS+R +
Sbjct: 138 QVPVEEATTYAQENGLFFMETSAKTAINVNDVFYEIAKRLLAGQQAQNPQAGMVLSQRPA 197
Query: 197 MR 198
R
Sbjct: 198 ER 199
>gi|323352564|gb|EGA85063.1| Ypt53p [Saccharomyces cerevisiae VL3]
Length = 220
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGEXAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+T+E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK+DL E + M+ A + ++F SAK I ++F L +++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMKAPAVQNLCXRENLLYFEASAKTGENIYQIFQTLGEKV 179
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA S ++N ++ K+VLLG+ GK+S++LR+V+ +F E +T+ A+F ++ + +
Sbjct: 1 MATSGNKNMNA----KLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGAAFFSQTVAVND 56
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ IWDTAGQER+H+L P+YYR + A++V+DIT++ SF++ K WV+EL+ ++
Sbjct: 57 ATVKFEIWDTAGQERYHSLPPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNM 116
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM--LEK 179
+ +AGNK DL R V E+A+ YAQ G TSAK + ++F E++ R+ L+
Sbjct: 117 VMALAGNKADLLDARKVAAEEAQTYAQENGLFFMETSAKTASNVNDIFYEIANRLPRLQP 176
Query: 180 AQ 181
AQ
Sbjct: 177 AQ 178
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 107/163 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FKV+L+G+ VGK+ ++LR+ ED + E +I+T+ F K + + GK + IWDTAG
Sbjct: 8 YLFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G ++VYDITD DSF+ VK+W+ E+++ +++ + + GNK DL
Sbjct: 68 QERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLTEIERYTSDNVNMILVGNKCDLA 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
++R V Q+ A+ +A VG TSAK +E+ FL +++ +
Sbjct: 128 EKRAVEQQMAKAFANDVGIPFLETSAKDATNVEQAFLTMAREI 170
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 58 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 117
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK+D+ R
Sbjct: 118 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDAR 177
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
V E+A+ YAQ G TSAK + ++F E+++R+L+
Sbjct: 178 HVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQ 219
>gi|123492550|ref|XP_001326088.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121908997|gb|EAY13865.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 100/165 (60%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
ST KVVLLG VGKT +V R + F+ + ++T+ ASF K L I + L IWDT
Sbjct: 2 STIEAKVVLLGATSVGKTCIVTRATSNFFDPEQVSTVGASFSAKTLQIDDTTVTLRIWDT 61
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF AL P+YY+ S A++V+ + DSFE WV EL L + GNK D
Sbjct: 62 AGQERFRALAPMYYQGSQAAIIVFSLDSTDSFEDANQWVDELGPHFDQMPLLYLVGNKAD 121
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
L RTV E+A++ A +GA++F TSAK + I+E+F +++R+
Sbjct: 122 LVDNRTVKLEEAQERADKMGALYFETSAKTGQNIDELFASIAERI 166
>gi|354548327|emb|CCE45063.1| hypothetical protein CPAR2_700670 [Candida parapsilosis]
Length = 231
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 12/214 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR--LNLAIWDTAG 73
FK+VLLGE VGK+S+V R+V++ F++ +T+ A+FL + + I + + IWDTAG
Sbjct: 20 FKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGAAFLTQSITIPETQTTIKFEIWDTAG 79
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+ +L P+YYR +N A+ VYDIT +SF K ++W+KELKK +DI + + GNK+DLE
Sbjct: 80 QERYKSLAPMYYRNANAALCVYDITSRNSFAKAQDWIKELKKQAPSDIVVALVGNKLDLE 139
Query: 134 KQRTVMQEDAEKYAQSVGAVHF-----HTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
R V E+ ++Y + F SAK G+ E+F + + + E LA
Sbjct: 140 DNREVQSEEVDEYISELQTDGFKIIKAECSAKNGDGVVELFEAIGRAL---PVEEVLAAN 196
Query: 189 SELSRRGSMRRNVVVVEDEDL--PTSSSTKSGCC 220
+ SR+G DL P + +S C
Sbjct: 197 ANRSRQGDAAGGGRRPGGVDLNRPKRAQAQSSSC 230
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDSTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK K+W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+DL +R V QE+A+KYA+ G + TSAK G+ E+F +++++
Sbjct: 122 LDLAARRQVSQEEAKKYAEEEGLMWGETSAKSGEGVSEIFNAIAKKL 168
>gi|327260890|ref|XP_003215266.1| PREDICTED: ras-related protein Rab-17-like [Anolis carolinensis]
Length = 324
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 6 LDRNSSS-TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL 64
LD +SS +Y FK+VLLG VGK+S+ RYV+ F + + T+ SF + L + +
Sbjct: 15 LDAHSSKDSYVFKIVLLGSSSVGKSSLAYRYVKKDFRDS-LPTVGCSFFTQTLRLDNSTI 73
Query: 65 NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKEL-KKMLGNDICL 123
L IWDTAGQE++H++ +YYR +N A+LVYDIT ++S EK K W++EL K+ L ++I +
Sbjct: 74 KLEIWDTAGQEKYHSVCHLYYRGANAAILVYDITKKESLEKAKVWLRELEKEFLQDEIII 133
Query: 124 TIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
+ GNK+DL +R V ++AE +A + ++ TSAK N + E+F L
Sbjct: 134 VLVGNKVDLSPEREVTLQEAEDFANTKSMLYMETSAKTNHQVTELFTAL 182
>gi|351713433|gb|EHB16352.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 221
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VL +V+ +F+E +T A+FL + + + + IWD AGQE
Sbjct: 21 FKLVLLGESVVGKSSLVLHFVKGQFHEFQESTTGAAFLTQTMCLDDTTVKFEIWDIAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P++YR + +++VYDIT+E+SF + KNWVKEL++ +I + + GN DL +
Sbjct: 81 RYHSLAPMHYRGAQASIVVYDITNEESFARAKNWVKELQRQASPNIAIALLGNTADLANR 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V ++A+ A + TSAK + + E+F+ +++++ + + E S RG
Sbjct: 141 RAVDFQEAQSCADDNSFLFLETSAKTSMNVNEIFMAIAKKLSKNEPQ----NPGENSARG 196
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V + E PT T+S CC
Sbjct: 197 ---RGVDLTE----PT-QPTRSQCC 213
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 123/197 (62%), Gaps = 6/197 (3%)
Query: 3 ANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK 62
A++ + S Y F++V+LG+ VGK+S+ R+V + F E +T+ A+F+ + +++
Sbjct: 6 ASTDESTGHSFYQFELVILGDTSVGKSSLDGRFVRNTFLEFQESTIGAAFMTQSVSLDDC 65
Query: 63 RLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDIC 122
+ IWDTAGQER+ L P+YYR S+ AV+VYDIT +SF++ K W++EL+ +G ++
Sbjct: 66 TVKFEIWDTAGQERYRTLAPMYYRGSSAAVIVYDITMHESFQQAKGWIQELQAHVGPNVV 125
Query: 123 LTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ------RM 176
L +AGNK+DL+ R V +E AE++A + + TSAK ++E+F E+++ R+
Sbjct: 126 LALAGNKVDLDSSREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPKGRRI 185
Query: 177 LEKAQEFDLAKASELSR 193
E + F + S L +
Sbjct: 186 KELHEGFKIDNQSHLPK 202
>gi|406693962|gb|EKC97301.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 241
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 26/230 (11%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNK----KLNIAGKRLNLAIWDTA 72
K+VLLGE VGK+S+VLR+V++ FNE T+ A+FL + + + + + IWDTA
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGAAFLTQTDLPECRLENRVVKFEIWDTA 71
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERFH+L P+YYR + AV+VYDIT S EK K WVKEL++ +I + + GNK+DL
Sbjct: 72 GQERFHSLAPMYYRNAAAAVVVYDITKAASLEKAKAWVKELQRQANPNIVIALVGNKLDL 131
Query: 133 ---------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLE 171
E R V +A+ YA G + F SAK ++E+F E
Sbjct: 132 VEGSSASESADAEADTPADDEETARQVPTSEAQAYATESGLLFFEASAKTGTNVQEVFTE 191
Query: 172 LSQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDL-PTSSSTKSGCC 220
+++ + + A ++ RR + DL + + K GCC
Sbjct: 192 IAKTIPLDSIAPKPAAGAQQGRRSAANAAAGDQARVDLGEGAQAKKGGCC 241
>gi|340723572|ref|XP_003400163.1| PREDICTED: ras-related protein RabJ-like [Bombus terrestris]
Length = 220
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V+LG VGKTS+++RY+ +N + T+ ASF N KLNI + L +WDTAGQER
Sbjct: 6 KIVVLGSQGVGKTSMIMRYIGKTYNSQVNPTIGASFFNCKLNIQDTGIMLRVWDTAGQER 65
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
F ++ P+YYR +N A+LV+D+T ++F +K WV EL++ + + L + GNK DL ++R
Sbjct: 66 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEETLVLVVIGNKSDLIEKR 125
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
V E+ YA +GA + TS GIE +FL +++ +L
Sbjct: 126 QVNAEEGRLYATKIGASYHETSVLQGEGIENVFLTVARGLL 166
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 113/182 (62%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ + + +AGNK D+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGS 196
V E+A+ YAQ G TSAK + ++F E+++++L+ Q L++R +
Sbjct: 133 QVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIAKKLLQGQQAPSPQAGMVLNQRPN 192
Query: 197 MR 198
R
Sbjct: 193 ER 194
>gi|19880892|gb|AAM00540.1|AF458973_1 YPT53 [Saccharomyces cerevisiae]
gi|19880899|gb|AAM00546.1|AF458974_1 YPT53 [Saccharomyces cerevisiae]
gi|256270260|gb|EEU05478.1| Ypt53p [Saccharomyces cerevisiae JAY291]
Length = 220
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 6 LDRNSSS--TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR 63
+D+++++ T + KVVLLGE VGK+S+VLR+V D F E T+ A+FL K++ GK
Sbjct: 1 MDKHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV 60
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ IWDTAGQERF L P+YYR + A++V+D+++E SF K +NWV+EL + +G+DI +
Sbjct: 61 IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVSNEGSFYKAQNWVEELHEKVGHDIVI 120
Query: 124 TIAGNKIDL-----EKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ GNK+DL E + M+ A + ++F SAK I ++F L +++
Sbjct: 121 ALVGNKMDLLNNDDENENRAMEAPAVQNLCDRENLLYFEASAKTGENIYQIFQTLGEKV 179
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 119/214 (55%), Gaps = 11/214 (5%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ ++NW++ +++ D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA------- 186
+R V +E EK A G TSAK N +E F L++ + K + LA
Sbjct: 127 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK-KLATAPRGVT 185
Query: 187 ---KASELSRRGSMRRNVVVVEDEDLPTSSSTKS 217
K+ + SRRG+ +V E L S + S
Sbjct: 186 RESKSHQTSRRGAAFSDVFFCEGHRLTLSLAQPS 219
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G VGK+S++LR+ ++ FNE + T+ F + ++ GK + L IWDTAG
Sbjct: 9 YLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDTAG 68
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YY+ ++G +LVYD+TD+ SF+ V+NW+ E++K ++ + GNK+DLE
Sbjct: 69 QERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNKVDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R V E+ ++ A S+ TSAK + +E+ F+ L+ + K +AK+SE
Sbjct: 129 SKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAK-----VAKSSEAIP 183
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R + D+ T T GCC
Sbjct: 184 VKTGPR---ITPDQQQNTVKDT--GCC 205
>gi|401624887|gb|EJS42926.1| ypt52p [Saccharomyces arboricola H-6]
Length = 236
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 123/210 (58%), Gaps = 37/210 (17%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA-------- 67
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I N A
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNEANPKDVVIK 63
Query: 68 --IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLT 124
IWDTAGQER+ +L P+YYR +N A++VYDIT EDS +K +NWV ELK +G +D+ +
Sbjct: 64 FEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIY 123
Query: 125 IAGNKIDL--------------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRG 164
+ GNK+D+ +K R + E+A +YAQ G + SAK G
Sbjct: 124 LLGNKVDICQETPVVETSPESNEAGNDEQKVRAISTEEAGQYAQDQGLLFREVSAKTGEG 183
Query: 165 IEEMFLELSQRMLEKAQEFDLAKASELSRR 194
I+E+F ++ +++ +DL K LS++
Sbjct: 184 IKEIFQDIGEKL------YDLKKDEFLSKQ 207
>gi|151337003|gb|ABS00941.1| GTP-binding protein RAB5 [Lentinula edodes]
Length = 207
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ +L P+YYR +N AV+VYDIT S EK +NW++EL++ I + + GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL +R V +E+A+KYA+ G + TSAK G+ E+F +++++
Sbjct: 122 SDLSARRQVSEEEAKKYAEEEGLMWAETSAKTGEGVSEIFTAIAKKL 168
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 4 NSLDRNSSSTYSFKV--VLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA- 60
NS + +S + KV VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + +
Sbjct: 20 NSANEGASDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQD 79
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
+ IWDTAGQER+ AL P+YYR + AV+VYDIT +SF K + WVKEL+K D
Sbjct: 80 SSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYWVKELQKHGSPD 139
Query: 121 ICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
I + + GNK DL+++R V +D +YA+ G TSAK I ++F E+++R+
Sbjct: 140 IIMALVGNKADLQERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 195
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 20/224 (8%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + + G
Sbjct: 1 MGNEFD------YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR ++G ++VYDITD +SF VK W+ E+ + + +
Sbjct: 55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDRYANDTV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
C + GNK DL + RTV A+ YA+ +G TSAK + +EE FL +S +
Sbjct: 115 CKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDLPTSSSTKSGCCLT 222
K S+ + ++ R N+V ++ + + KS CC T
Sbjct: 170 -----KNSKARSQAALERKPSNIVQMKGQPIQ-QEQQKSRCCST 207
>gi|167518440|ref|XP_001743560.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777522|gb|EDQ91138.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+ LLG+ GK+S+ YV + T+ ASFL K + + + L L+IWDTAGQE+
Sbjct: 7 KLCLLGDAGCGKSSLAQLYVYGSCPPRLEPTIGASFLTKMITLDNRELKLSIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKM-LGNDICLTIAGNKIDLEKQ 135
+ L P+YYR + AV+VYDIT +F+ V++WV EL + G + L IAGNK DL++Q
Sbjct: 67 YRGLAPMYYRDAEAAVIVYDITKASTFQNVRSWVSELTAINPGQRLALAIAGNKADLDEQ 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
R V +DA KYA+SVGA+ F TSA + E+F +L+
Sbjct: 127 RQVAYQDASKYAESVGAIFFETSAIQGINVHELFDQLA 164
>gi|45185604|ref|NP_983320.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|44981322|gb|AAS51144.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|374106525|gb|AEY95434.1| FACL084Cp [Ashbya gossypii FDAG1]
Length = 207
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++N+ K + IW
Sbjct: 2 NSNVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMDSKTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNK 121
Query: 130 IDL---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
+DL + R V +E+AEK A+ G + F TSAK I E+FL + +++ LA
Sbjct: 122 LDLLENGEARKVSREEAEKLAEEEGLLFFETSAKTGDKINEVFLAIGEKI-------PLA 174
Query: 187 KASELSRRGS 196
K E G
Sbjct: 175 KVGEQPASGP 184
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 107/165 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + ++I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +L YDITDE SFE ++NW+K + + + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V +E A+K A+ G F TSAK + ++E F L++ +L K+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 107/167 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKT +++R+ ED +N +I+T+ F K + + GK++ L +WDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE SFE ++NW+K +++ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLLGNKCDVE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
+R V +E E A+ F TSAK + +EE F L++ +L+K+
Sbjct: 127 AKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQKS 173
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ T S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IW
Sbjct: 4 APPTTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK
Sbjct: 64 DTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNK 123
Query: 130 IDLEKQ---------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DL + R V E+ +K A G + F TSAK + E+F+ + ++ E
Sbjct: 124 HDLVEDDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPE 181
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 199
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 4 NSLDRNSSSTYS----FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
N+++ NS++T S K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L +
Sbjct: 16 NNINDNSTATDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLAL 75
Query: 60 AGKRL-NLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+ IWDTAGQER+ AL P+YYR + A++VYDIT +SF+K + WVKEL+K
Sbjct: 76 EDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESFKKAQYWVKELQKHGN 135
Query: 119 NDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
I + + GNK DL + R+V ++A++YA+ TSAK I ++F E+++R+
Sbjct: 136 PGIIMVLVGNKADLHESRSVPTQEAQEYAEKNSMFFMETSAKTADNINQLFEEIAKRL 193
>gi|340500975|gb|EGR27802.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 254
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 8 RNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA 67
+N Y FK V++G VGK+S+++R+ +D+FNE ++TT+ F K LNI K + L
Sbjct: 2 QNREYDYLFKFVIIGNSNVGKSSILMRFSDDQFNESYLTTIGVDFRFKTLNIDQKLIKLQ 61
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKV-KNWVKELKKMLGNDICLTIA 126
IWDTAGQERF + YY+ ++ VLVYDI++ +SF+ + K W+KE++ D+ L +
Sbjct: 62 IWDTAGQERFRTITNAYYKGADVIVLVYDISNNESFQDIEKFWLKEVENYAEKDVELILL 121
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
GNK DL+ QRT+ ++YA+ G + TSAK N IE+ F+ + ++++ K
Sbjct: 122 GNKCDLDAQRTIDTIQVQEYAEKKGMEFYETSAKTNESIEKAFVNIGKKLIAK 174
>gi|397483947|ref|XP_003813150.1| PREDICTED: ras-related protein Rab-17 [Pan paniscus]
Length = 211
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S FK+VLLG G VGK+S+ LRYV++ F + T+ +F K +++ L L IW
Sbjct: 14 PSQPRVFKLVLLGSGSVGKSSLALRYVKNNFKSI-LPTVGCAFFTKVVDVGAASLKLEIW 72
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE++H++ +Y+R +N A+LVYDIT +DSF K + W+K+L++ L ++ + + GNK
Sbjct: 73 DTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPEVLVMLVGNK 132
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
DL ++R V ++ +++A S + TSAK+N + E+F ++Q +L++ E
Sbjct: 133 TDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRGDE 185
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 101/154 (65%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKT +++R+ ED FN +I+T+ F K +++ GK++ L +WDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDITDE SFE ++NW+K +K+ + + GNK D+E
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIE 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEE 167
+R V +E EK A+ G F TSAK + +EE
Sbjct: 127 AKRKVSRETGEKLAKDHGIKFFETSAKSSINVEE 160
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 115/188 (61%), Gaps = 12/188 (6%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
++S FK+VLLG+ VGK+ +V+R+V D+F E T+ A+FL + + + + I
Sbjct: 2 SNSRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI--- 125
WDTAGQER+ +L P+YYR + A++VYDIT+ DSF K+WVKEL++ ++ + +
Sbjct: 62 WDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDQNVVIAMLTG 121
Query: 126 ---------AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
AGNK DLE +R V +A YA+ G +H TSAK ++ +F+E+++++
Sbjct: 122 SESDLITRQAGNKADLEARRKVDFNEANDYAEENGILHMETSAKNANNVKSLFVEIAKKL 181
Query: 177 LEKAQEFD 184
+ Q+ D
Sbjct: 182 PKAQQQPD 189
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 108/165 (65%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GK+S+VLR+V+ +F E +T+ A+F ++ L + + + IWDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 73
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDIT+ SF + K WV+EL+ ++ + +AGNK DL R
Sbjct: 74 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLLDTR 133
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
V ++A+ YAQ G TSAK + ++F E+++++L+ Q
Sbjct: 134 QVSADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKLLQGQQ 178
>gi|118093304|ref|XP_421874.2| PREDICTED: ras-related protein Rab-17 [Gallus gallus]
Length = 213
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 127/213 (59%), Gaps = 15/213 (7%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N+ TY +K+VLLG VGK+S+ RYV++ F E + T+ SF + + + + L I
Sbjct: 13 NNRPTYIYKMVLLGSTSVGKSSLAYRYVKNDFKES-LPTVGCSFFTQTIQLETATIKLEI 71
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKEL-KKMLGNDICLTIAG 127
WDTAGQE++H++ +YYR ++ A+LVYD+T++++ + K W+ EL K+ L ++I + + G
Sbjct: 72 WDTAGQEKYHSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVG 131
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
NK DL +R V ED E++A+S + TSAK N + ++F+ ++Q +L + K
Sbjct: 132 NKTDLADEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAVAQELLRRE-----GK 186
Query: 188 ASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ + G +R DL +S T+ GCC
Sbjct: 187 KAAVPSTGDRQR-------LDL-QASRTRRGCC 211
>gi|156088339|ref|XP_001611576.1| Ras family protein [Babesia bovis]
gi|154798830|gb|EDO08008.1| Ras family protein [Babesia bovis]
Length = 227
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 107/169 (63%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S S+ K+VLLGE GKTS+V R+V D F + T+ FL+K + + GK + L +W
Sbjct: 15 SVSSQRIKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLW 74
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF L P Y R S+ A++VYDIT +SFEKVK+W+K++K++ G+ + I GNK
Sbjct: 75 DTAGQERFRTLMPSYIRDSSAAIVVYDITSPESFEKVKDWIKDIKELRGDKAIIMIVGNK 134
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DL +R V ++ E+ A+ + + TSAK I ++F +S +++
Sbjct: 135 TDLLDKRKVSYDEGEEEAKKLECLFCETSAKNGDNINDLFNTVSTELMK 183
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+ T S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IW
Sbjct: 4 APPTTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK
Sbjct: 64 DTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNK 123
Query: 130 IDLEKQ---------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
DL + R V E+ +K A G + F TSAK + E+F+ + ++ E
Sbjct: 124 HDLVEDDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPE 181
>gi|146183318|ref|XP_001025858.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|146143634|gb|EAS05613.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777784|dbj|BAJ21288.1| Rab-family small GTPase Rab5A [Tetrahymena thermophila]
Length = 199
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 107/160 (66%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
KVV+LG VGK+S+++R+V+D+F+ TT+ A+F++K + + IWDTAGQE+
Sbjct: 7 KVVILGNSGVGKSSIMMRFVKDEFSATQPTTMGAAFMSKIIKTNDNQFKFQIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR + ++VYDIT SF +K W+ EL+K ++ L I GNK DL+ ++
Sbjct: 67 YKSLAPLYYREARIGIVVYDITSLASFGVLKTWITELQKQGPENLILAIVGNKSDLQDKQ 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V EDA +A+ V A+ TSAK NRGI ++F++L+ ++
Sbjct: 127 EVPYEDAMNFAKQVDALFELTSAKENRGINDLFMKLASKI 166
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 8/208 (3%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y K++L+G+ VGK+ ++LR+ +D F ITT+ F + +++ GKR+ L IWDTAG
Sbjct: 14 YLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKRIKLQIWDTAG 73
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL- 132
QERF + YYR + G +LVYD+TDE SF ++NW++ +++ +++ + GNK D+
Sbjct: 74 QERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
E +R V E + A G F TSAK N +E++F ++ + + E D S
Sbjct: 134 ESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRRLAETD-------S 186
Query: 193 RRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R R N +V++ S KS CC
Sbjct: 187 RPEPPRINNIVLDPSKDQGSDKAKSTCC 214
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 19/194 (9%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S SS S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K N+
Sbjct: 1 MADSGAPKPSS--SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPT 58
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ + IWDTAGQERF +L P+YYR + A++VYD+T S K K+WV EL++ I
Sbjct: 59 RTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGI 118
Query: 122 CLTIAGNKIDLEKQ-----------------RTVMQEDAEKYAQSVGAVHFHTSAKMNRG 164
+ + GNK+DL R V E+A+ YA+ G + F TSAK
Sbjct: 119 VIALVGNKLDLTNDSAGGDGEGAGVGDGEDARKVTTEEAKSYAEEEGLLFFETSAKTGYN 178
Query: 165 IEEMFLELSQRMLE 178
+ E+F ++ + E
Sbjct: 179 VTEVFTAIANAIPE 192
>gi|388520843|gb|AFK48483.1| unknown [Lotus japonicus]
Length = 210
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 104/160 (65%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+VLLG+ GKTS+ LR+V+ +F T+ A+F + L+++ + IWDTAGQER
Sbjct: 12 KLVLLGDMGTGKTSLALRFVKGQFYPNQEPTVGAAFFTQILSLSEATVKFDIWDTAGQER 71
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+H+L P+YYR + A++VYDI+ D+F + + WV+EL++ + + +A NK DLE +R
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDISSIDTFVQAEKWVQELQRHGNQKLVMALAANKSDLEPKR 131
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V E+ EK+AQ G + TSAK I E+F E+++R+
Sbjct: 132 EVETEEGEKFAQENGMFYMETSAKTAENINELFYEIAKRL 171
>gi|332815792|ref|XP_003309588.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-17 [Pan
troglodytes]
Length = 211
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S FK+VLLG G VGK+S+ LRYV++ F + T+ +F K +++ L L IW
Sbjct: 14 PSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSI-LPTVGCAFFTKVVDVGAASLKLEIW 72
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE++H++ +Y+R +N A+LVYDIT +DSF K + W+K+L++ L ++ + + GNK
Sbjct: 73 DTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPEVLVMLVGNK 132
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
DL ++R V ++ +++A S + TSAK+N + E+F ++Q +L++ E
Sbjct: 133 TDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRGDE 185
>gi|254580657|ref|XP_002496314.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
gi|238939205|emb|CAR27381.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
Length = 211
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+SS S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++NI + + IW
Sbjct: 2 NSSVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGEQTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYDIT SF K ++WVKEL + I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNK 121
Query: 130 IDLEK---QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+D+ + +R V +E+AEK A+ G + F TSAK + E+FL + +++
Sbjct: 122 LDMIENGGERKVAKEEAEKLAEEEGLLFFETSAKSGENVNEVFLGIGEKI 171
>gi|426201327|gb|EKV51250.1| GTP-binding protein RAB5 [Agaricus bisporus var. bisporus H97]
Length = 207
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIW 69
S + FK+VLLGE VGK+S+VLR+V+D+F++ +T+ A+FL + + + + + IW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ A P+YYR +N AV+VYDIT S EK + W++EL++ +I +T+ GNK
Sbjct: 62 DTAGQERYKA--PMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNK 119
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL+ +R V QE+A+KYA+ G + TSAK G+ E+F +++++ A A++
Sbjct: 120 SDLDARRQVTQEEAKKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPS--ARSG 177
Query: 190 ELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
SR G R V ++ + P C
Sbjct: 178 AGSRTGPGARQGVDLDRQANPRGEGEACNC 207
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 113/169 (66%), Gaps = 6/169 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR-LNLAIWDTAGQ 74
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + + K + IWDTAGQ
Sbjct: 4 FKLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGAAFLSQTITLKNKTVIKFEIWDTAGQ 63
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND-ICLTIAGNKIDL- 132
ER+ +L P+YYR +N A++VYDIT+ DS K ++WV ELK +G++ + + + GNKIDL
Sbjct: 64 ERYKSLAPMYYRNANAALVVYDITENDSLMKAQSWVDELKSKVGDENLVICLVGNKIDLC 123
Query: 133 ---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
E +R V+ +DA+ YA + + SAK ++E+F + +++ E
Sbjct: 124 DEDESKRVVLTKDAKDYADEQNLMFYEVSAKSGENVKEVFQVIGEKLYE 172
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 98/161 (60%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT + R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE ++NWV+ +++ D+ I GNK D
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDAN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+R V +E EK A S G TSAK N IE F L++
Sbjct: 127 DKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
>gi|403223777|dbj|BAM41907.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 210
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 102/164 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G+ VGK+ ++LR+ +D F + +ITT+ F + + + KR+ L IWDTAG
Sbjct: 11 YLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVIVNNKRIKLQIWDTAG 70
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G ++VYD+TD+ SFE + +W+ E+ K D C + GNK D+E
Sbjct: 71 QERFRTITSTYYRGADGIIMVYDVTDKASFEHINDWLNEVNKYASEDTCKLLLGNKCDIE 130
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
R V D E+ ++ + SAK I++ FL ++++++
Sbjct: 131 DNRDVASTDVERLSEVIEVPAMEVSAKTGHNIDKAFLSITEKLV 174
>gi|448535786|ref|XP_003871017.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis Co 90-125]
gi|380355373|emb|CCG24891.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis]
Length = 223
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 23/221 (10%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IWDTAGQ
Sbjct: 11 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQ 70
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 71 ERFASLAPMYYRNAQAAIVVYDITKPASFVKARHWVKELHEQASKDITIALVGNKYDLVE 130
Query: 133 -------------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
E R V +E+ + A G + F SAK + + E+F+ + +++ +
Sbjct: 131 DEPEDGNTGEGDQELLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKIPDN 190
Query: 180 AQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ S + G + N + + E+ +SSS CC
Sbjct: 191 NKQ----GGSAATNNGEVNENRIDLSVENRKSSSS----CC 223
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 103/166 (62%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
++T KV LLG+ VGK+S++ R+V + FN +T+ ASF+ K L + + IWD
Sbjct: 2 NTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQER+ AL P+YYR + AV+VYDIT +SF V++WV+EL+ +I L IAGNK
Sbjct: 62 TAGQERYRALAPMYYRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDPNIVLGIAGNKC 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DLE R V E YA GAV TSA I+E+F+ ++ ++
Sbjct: 122 DLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKV 167
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 98/161 (60%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT + R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE ++NWV+ +++ D+ I GNK D
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDAN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+R V +E EK A S G TSAK N IE F L++
Sbjct: 127 DKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
Length = 212
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 111/171 (64%), Gaps = 4/171 (2%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++NI + IW
Sbjct: 2 NSAVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINDNTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++W+KEL + D+ + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWIKELHEQANKDMIIALVGNK 121
Query: 130 IDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+D+ E +R V +E+ EK A+ G + F TSAK + E F+ + +++
Sbjct: 122 VDVLENNEDERKVAREEGEKLAEEEGLLFFETSAKTGLNVTETFVAIGEKI 172
>gi|340506579|gb|EGR32688.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 193
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KVV+LG+ VGKTS+V R+V DKF ++ T ASF+ K K L IWDTAGQE
Sbjct: 7 LKVVVLGDSGVGKTSIVNRFVLDKFEQRQQITQGASFVQKDFKKGNKIFKLQIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
++ LGP+YYR S A++VYDIT+++SF+ ++ W+K+LK +I + + GNK DL +Q
Sbjct: 67 KYRTLGPLYYRDSEAAIVVYDITNKNSFQTLQQWIKDLKDYASENINIVLVGNKTDLIEQ 126
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
V ++A+ YA+++ A + SAK N+ I+ +F ++ +++ EK
Sbjct: 127 EQVSFDNAKLYAKNISAKFQYVSAKENKNIQCIFEDIIKQIEEK 170
>gi|118356223|ref|XP_001011370.1| Ras family protein [Tetrahymena thermophila]
gi|89293137|gb|EAR91125.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777752|dbj|BAJ21272.1| Rab-family small GTPase Rab1E [Tetrahymena thermophila]
Length = 250
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y K+V++G VGK+SV+LR+ +D+F+E ++TT+ F K LNI G+++ L IWDTAG
Sbjct: 8 YLIKLVIIGNSSVGKSSVLLRFSDDQFSESYLTTIGVDFRFKTLNIDGRKVKLQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKN-WVKELKKMLGNDICLTIAGNKIDL 132
QERF + YY+ ++G VLVYDIT+ SFE ++ W+ E++ D+ L + GNK DL
Sbjct: 68 QERFRTITNAYYKGADGIVLVYDITNSTSFEDIERFWLNEVESYAEKDVELLLLGNKSDL 127
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELS 192
QR V +YA+ + TSAK + IE+ FL +S+R++ K AK +E
Sbjct: 128 SDQRQVETNMVSEYAEKKHMDFYETSAKTSDQIEQAFLSISKRLMSKKD----AKLAEKK 183
Query: 193 RR 194
+R
Sbjct: 184 KR 185
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + ++I G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T DSF VK W+ E+++ + + + GNK D +
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNC-DVVNRVLVGNKNDAPNE 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N ++EMF+ +++++L +E +A + S
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETV 187
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R+ ++ K CC
Sbjct: 188 NLRK-----------STKQHKKKCC 201
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 106/164 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE S+E ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLGNKCDMENK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E EK A+ G F TSAK ++ ++E F L++ +L K
Sbjct: 129 RKVPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMK 172
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 14/221 (6%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK +++G+ VGK+ ++L++ + +F +H T+ F ++ L I K++ L IWDTAG
Sbjct: 6 YLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE F ++ YYR S G +LV+D+T SFE ++ W +E++ + I + I GNKIDLE
Sbjct: 66 QESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKIDLE 125
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE--- 190
+R V E+A KYAQ G +F TSAK ++ +F ++ ++L+K ++ E
Sbjct: 126 DRREVQTEEARKYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKIDSGEIDPTQEVYG 185
Query: 191 --LSRRGSMRRNVVVVEDE----DLPTSSSTK-----SGCC 220
+ G ++N VV E L T+S T+ GCC
Sbjct: 186 IKIGSIGIKKKNDVVQPREQPKAQLVTTSQTQQQEKNGGCC 226
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQE 92
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+ YDIT +SF K + WVKEL+K DI + + GNK DL+++
Sbjct: 93 RYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEK 152
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V ED YA+ G TSAK I E+F E+++R+
Sbjct: 153 REVAVEDGMDYAEKNGMFFIETSAKTADNINELFEEIAKRL 193
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 114/172 (66%), Gaps = 9/172 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNK--KLNIAGKRL--NLAIWDT 71
FK+VLLG+ VGK+S+V R+V+D F + +T+ A+FL++ KLN GK + IWDT
Sbjct: 4 FKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGKEVIVKFEIWDT 63
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND-ICLTIAGNKI 130
AGQER+ +L P+YYR +N A++VYDIT+ DS K K WV+ELK +G+D I + + GNK+
Sbjct: 64 AGQERYKSLAPMYYRNANAALVVYDITELDSLNKAKTWVEELKNKVGDDNIVIYLVGNKL 123
Query: 131 DL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
D+ +R V E A++YA+ G + TSAK I+E F E+ +++ +
Sbjct: 124 DVCEKDSSKRLVSLEGAKEYAKEQGLLFIETSAKTGANIKETFQEIGEKLYD 175
>gi|145496190|ref|XP_001434086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831499|emb|CAI39317.1| rab_C12 [Paramecium tetraurelia]
gi|124401209|emb|CAK66689.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 126/222 (56%), Gaps = 12/222 (5%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S +Y FK +L+G+ VGK+ ++L++++ +F +KH T+ F K + + G + L IWD
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGAKLIELDGLNIKLQIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQE F ++ YYR + GA++VYDIT +S+E V W++E+K+ + + + GNK
Sbjct: 62 TAGQESFRSITRSYYRSAAGAIVVYDITKRESYENVARWMEEVKQNGNPKLSMLLVGNKG 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA---------Q 181
DLE R V +A+++A+ G F TSAK +EE+F++++Q +LEK +
Sbjct: 122 DLESDRQVSYNEAQQFAKECGIEFFETSAKTANNVEEIFIKMAQIILEKINLGQIDPKNE 181
Query: 182 EFDLAKASELSRRGSMRRNVVVVE--DEDLPTSSSTKS-GCC 220
F + SE +N+ +E E P KS GCC
Sbjct: 182 NFGIKLGSEQVNYSHGNQNITNLEQQQEYQPYEEKKKSGGCC 223
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|296491534|tpg|DAA33577.1| TPA: ras-related protein Rab-5A [Bos taurus]
Length = 160
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 96/132 (72%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 136 RTVMQEDAEKYA 147
R V ++A+ YA
Sbjct: 141 RAVDFQEAQSYA 152
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L + + IWDTAGQE
Sbjct: 84 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQE 143
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + A++VYDIT +SF K + WVKEL+K D+ + + GNK DL
Sbjct: 144 RYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKADLHDN 203
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R+V +DA++YA+ TSAK I ++F E+++R+
Sbjct: 204 RSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRL 244
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 101/161 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCDVN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
++R V +E EK A G TSAK N +E F L++
Sbjct: 127 EKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLAR 167
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|403297081|ref|XP_003945248.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5B [Saimiri
boliviensis boliviensis]
Length = 342
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VLLGE VGK+S+VLR+V+ F A+FL + + + + IWDTAGQE
Sbjct: 145 FKLVLLGESAVGKSSLVLRFVKGIF--PSFLLFIAAFLTQSVCLDDTTVKFEIWDTAGQE 202
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+H+L P+YYR + A++VYDIT++++F + K WVKEL++ I + +AGNK DL +
Sbjct: 203 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 262
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V E+A+ YA + TSAK + ++FL + + F L S
Sbjct: 263 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKVRTSXGLPFSLIHRQNYSXPK 322
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
S R V + E S KS CC
Sbjct: 323 S--RGVDLHEQ-----SQQNKSQCC 340
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 11/209 (5%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S Y FK++L+G+ VGK+S++LR+ +D + E +I+T+ F + + + GK + L IWDT
Sbjct: 34 SDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKID 131
AGQERF + YYR ++G ++VYD+TD +SF VK W+ E+ + ++ + GNK D
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCD 153
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
LE +R V E +++A +G TSAK + +E+ FL ++ ++ KA+ + A+
Sbjct: 154 LEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI--KARMKNQPSAAPA 211
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ G R+ V ++ GCC
Sbjct: 212 TKPGVNLRSQQVKKE---------GGGCC 231
>gi|260792539|ref|XP_002591272.1| hypothetical protein BRAFLDRAFT_216541 [Branchiostoma floridae]
gi|229276476|gb|EEN47283.1| hypothetical protein BRAFLDRAFT_216541 [Branchiostoma floridae]
Length = 142
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 95/139 (68%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGKTSVV+RYV F++ T+ ASF K+ + R+ L +WDTAGQERF ++ P+YY
Sbjct: 3 VGKTSVVIRYVGKLFSKHVSPTIGASFFTFKMTVDDYRVKLQLWDTAGQERFRSMAPMYY 62
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R +N A+LVYDIT +SFE +++WV ELKK + I + + GNK DL +R V +E AE+
Sbjct: 63 RKANAALLVYDITCRESFENIQSWVDELKKNVEGTIIMCVIGNKTDLVSRREVTREKAEQ 122
Query: 146 YAQSVGAVHFHTSAKMNRG 164
YA S+ A+++ TSA N G
Sbjct: 123 YADSINALYYETSALTNDG 141
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|154422723|ref|XP_001584373.1| hypothetical protein [Trichomonas vaginalis G3]
gi|62736316|gb|AAX97487.1| small Rab GTPase RabX10 [Trichomonas vaginalis]
gi|121918620|gb|EAY23387.1| hypothetical protein TVAG_070500 [Trichomonas vaginalis G3]
Length = 196
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ + FK++++GE VGKT ++LR+ ++ F E ++T+ F +++++ GKR+ L IW
Sbjct: 2 SAHDHLFKLLIVGESGVGKTCMLLRFADNSFEENFLSTIGVDFKVREIDVDGKRVKLQIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
D+AGQERF + YYR G ++VYDIT D+F KV W+++++K+ N + L + GNK
Sbjct: 62 DSAGQERFRNITTSYYRNCGGIIIVYDITRHDTFTKVTEWIEDVRKITSN-VPLLLVGNK 120
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
DLE +R V +++A++ A +G V TSAK IE+ F ++S++++++A
Sbjct: 121 ADLEDKRAVTEQEAKELANRMGLVLLETSAKTALNIEDAFKQISRQLIKEA 171
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R S+ K+VL+G+ GKTS+VLR+V+ +F E T+ A+F + L++ +
Sbjct: 1 MARPSNKNIQAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEATVK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + AV+VYDI++ D+F + K WV+EL+K ++ + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISNVDTFVRAKKWVQELQKQGNKNLVMAL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
NK DLE +R V ++ EK ++ G TSAK + I E+F E+++R+
Sbjct: 121 VANKCDLESKREVNTQEGEKLSEENGMFFIETSAKTSLNINELFYEIAKRL 171
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQER 76
+VLLG+ VGK+ ++LR+V +F+ T+ ASFL++ +++ + IWDTAGQER
Sbjct: 5 LVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAGQER 64
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ +L P+YYR + AV+VYDIT+ ++F K + WVKEL+K DI + + GNK DLE +R
Sbjct: 65 YASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLENER 124
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
V +A+ YA+S G TSAK + + ++F E+++R+
Sbjct: 125 EVSHAEAQAYAKSNGMFFIETSAKTSENVNQLFEEIAKRL 164
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + ++I G+R+ L IWDTAGQE
Sbjct: 57 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQE 116
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T DSF VK W+ E+++ + + + GNK D +
Sbjct: 117 RFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNC-DVVNRVLVGNKNDAPNE 175
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N ++EMF+ +++++L +E +A + S
Sbjct: 176 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETV 235
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R+ ++ K CC
Sbjct: 236 NLRK-----------STKQHKKKCC 249
>gi|428671198|gb|EKX72116.1| Ras family Rab small STP-binding protein [Babesia equi]
Length = 257
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 7 DRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNL 66
++ + +K+V+LG+ VGK+ +V R+V+D+F ++ +T+ ++F+ + + +
Sbjct: 60 EKGKDKVFHYKLVILGDAFVGKSCIVSRFVKDEFVDQQ-STIGSAFVKHTIKVDDATIIF 118
Query: 67 AIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
IWDTAGQER+ L P+YYR S A++VYDIT DSF++ K+W++ELK + +I L +A
Sbjct: 119 EIWDTAGQERYRTLAPMYYRGSAAAIIVYDITVRDSFDQAKSWIQELKSYVEPNIVLGLA 178
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
GNK+DLE QR+V + +++A++ + TSAK I ++F+EL++++
Sbjct: 179 GNKVDLEDQRSVNLDIVKEFAKANDCIFMETSAKTGHNINKLFMELARKI 228
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 12/207 (5%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGK+ ++LR+ +D F + +I+T+ F + +++ GK + L IWDTAG
Sbjct: 9 YLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDTAG 68
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G ++VYD+TD +SF +K W+ E+ + +++C + GNK DL
Sbjct: 69 QERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCDLV 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+ V E A+ +A S+G TSAK + +EE FL +S + ++ +A + R
Sbjct: 129 DSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEIKKR-----MATQPTVER 183
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R ++ V + P KS CC
Sbjct: 184 RPTVH-----VHMKGQPIQQ--KSSCC 203
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis niloticus]
Length = 203
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 109/169 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G VGKT +V R+ + F T+ F+ K + I G+++ L IWDTAG
Sbjct: 8 YLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR +N +L YDIT EDSF + W++E+++ N + + GNKIDL
Sbjct: 68 QERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLA 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
++R V+++ AE +A++ ++ TSAK + +E++FL+L+ ++ +A++
Sbjct: 128 EKREVLRQRAEDFAEAQSMLYLETSAKESDNVEKLFLDLACELIREAKQ 176
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 105/166 (63%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
++R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 EKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTK 172
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|336271401|ref|XP_003350459.1| hypothetical protein SMAC_02172 [Sordaria macrospora k-hell]
gi|380090981|emb|CCC11514.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 236
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 30/230 (13%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K N+ + + IWDTAGQ
Sbjct: 12 SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQ 71
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF +L P+YYR + A++VYD+T S K K+WV EL++ I + + GNK+DL
Sbjct: 72 ERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTS 131
Query: 135 Q---------------------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELS 173
R + E+A+ YA+ G + F TSAK + E+F ++
Sbjct: 132 DSAGTAEVSGDGDDNAEDSGDARKISTEEAKTYAEEEGLLFFETSAKTGHNVTEVFTAIA 191
Query: 174 QRMLE---KAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ E K+ A + +SR R N+ + P S K GC
Sbjct: 192 NAIPETSLKSARGPGASHAGVSRTEEQRVNL------NGPRDSHAKEGCA 235
>gi|409046611|gb|EKM56091.1| hypothetical protein PHACADRAFT_257157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 109/165 (66%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGK+ ++LR+ ED F + +++T+ F + +++ GK + L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIDLEGKTVKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G ++VYD+TD++S+E VK W+ E+ + + I GNK DL
Sbjct: 67 QERFRTIAAAYYRGAHGIIVVYDVTDKESYENVKGWLTEIDRYASEGVLKLILGNKSDLA 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
++R V + A+++A +G TSAK + G+E+ F+ +++++ E
Sbjct: 127 ERRVVEHDTAKEFADQLGIPLLETSAKTSAGVEDAFIAMAKQVKE 171
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 126/213 (59%), Gaps = 15/213 (7%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
NS Y FK++L+G+ VGK+ ++LR+ +D++++ +ITT+ F + +++ GK + L I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERF + YYR ++G ++VYD+TD DSF VK W+ E+ + ++ + GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTWLHEIDRYANENVVKLLVGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DL ++ V E A+++A S+G TSAK + +E F+ +++ +++K A
Sbjct: 122 KADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQK-------NA 174
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKS-GCC 220
S S + VV P+++ +S GCC
Sbjct: 175 SVQSGPKGAKPTVV-------PSAAKKESKGCC 200
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + ++I G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T DSF VK W+ E+++ + + + GNK D +
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNC-DVVNRVLVGNKNDSPNE 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N ++EMF+ +++++L +E +A + S
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETV 187
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R+ ++ K CC
Sbjct: 188 NLRK-----------STKQHKKKCC 201
>gi|448083219|ref|XP_004195336.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359376758|emb|CCE87340.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 134/231 (58%), Gaps = 19/231 (8%)
Query: 1 MMANSLDRNSSSTYS-FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
M NS S++ ++ FK+VLLGE VGK+S+V R+V++ F++ +T+ A+FL + + +
Sbjct: 1 MATNSSPEGSNNRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQSVKL 60
Query: 60 AGKR--LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML 117
K + IWDTAGQER+ +L P+YYR +N A+ VYDIT SF + + W+KELKK
Sbjct: 61 PEKSATVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNRAQEWIKELKKQA 120
Query: 118 GNDICLTIAGNKIDLEKQRTVMQEDAEKYA---QSVGA--VHFHTSAKMNRGIEEMFLEL 172
+I + + GNK D++++R V QE+ ++Y Q+ G + SAK G+ E+F +
Sbjct: 121 PENITICLVGNKTDMQEEREVNQEEVDEYITQLQNEGTTLISGECSAKSGDGVLEIFTNI 180
Query: 173 SQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDL---PTSSSTKSGCC 220
+ + + ++ S +R RR+ V DL P+ + +GCC
Sbjct: 181 ANALPVE----EVINNSPRNRSLGSRRSAGV----DLGRAPSQNQANTGCC 223
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 10/207 (4%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G VGK+S++LR+ ++ FNE + T+ F + ++ GK + L IWDTAG
Sbjct: 9 YLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDTAG 68
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YY+ ++G +LVYD+TD+ SF+ V+NW+ E++K ++ + GNK+DLE
Sbjct: 69 QERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNKVDLE 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+R V E+ ++ A S+ TSAK + +E+ F+ L+ + K +AK SE
Sbjct: 129 SKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAK-----VAKGSEAVP 183
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R + D+ T T GCC
Sbjct: 184 IKTGPR---ITPDQQQNTVKDT--GCC 205
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT ++ R+ +D FN I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+ SF+ + W++ + + D+ I GNK D+ +
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +E EK AQ G TSAK+N ++ F +L++ +L K + S
Sbjct: 130 RVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPD---------STDE 180
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V V+ P S+ GCC
Sbjct: 181 QSRDTVNPVQ----PQRQSSSGGCC 201
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 125/205 (60%), Gaps = 12/205 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + +++ G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDVDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T DSF VK W+ E+++ + + + GNK D +
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNC-DVVNRVLVGNKNDAPNE 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N ++EMF+ +++++L +E +A + S
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNVNVQEMFMAITRQVLRTKKERKERQAIQTSETV 187
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
++R+ ++ K CC
Sbjct: 188 NLRK-----------STKQHKKKCC 201
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 16/211 (7%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G+ VGK+ ++LR+ +D F + +ITT+ F + + I K + L IWDTAG
Sbjct: 11 YLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIKLQIWDTAG 70
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G VLVYD T + SF+ + +W+ E+ + D + GNK DL
Sbjct: 71 QERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDDWISEVDRYT-TDSSKILVGNKCDLV 129
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
QR + Q EK + +G SAK + +E+ F+ +++R+LEK S+
Sbjct: 130 AQRAIEQSQGEKKSSELGIDFIEASAKNSTNVEDCFIRIAKRLLEKK-----------SQ 178
Query: 194 RGSMRR----NVVVVEDEDLPTSSSTKSGCC 220
G++ R N+ + E D T SS S CC
Sbjct: 179 SGAVPRIAHQNIQLCETNDNSTFSSILSTCC 209
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTK 172
>gi|428180040|gb|EKX48909.1| hypothetical protein GUITHDRAFT_151724 [Guillardia theta CCMP2712]
Length = 207
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 14/219 (6%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MAN+ + + +K+V LG+ VGKTS++ R++ DKF+ + T+ FL+K + +
Sbjct: 1 MANA--QAAPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDSTYQATIGIDFLSKTMYLDD 58
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ + L +WDTAGQERF +L P Y R S+ AV+VYD+T+ +SF+ W+ E+++ G D+
Sbjct: 59 RVVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTNRESFDNAGKWIDEVRQERGEDV 118
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
L + GNK DL ++R V +E+ E+ A+S + TSAK ++ +F +L+Q+ L A+
Sbjct: 119 ILALVGNKTDLAEKRRVTREEGEEKAKSFKILFVETSAKAGLNVKSLFRQLAQQ-LPGAE 177
Query: 182 EFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ K SEL V D P+ SG C
Sbjct: 178 NAAVKKDSEL-----------VEVKLDTPSQQKNPSGAC 205
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL-NLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L + + IWDTAGQE
Sbjct: 34 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 93
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + A++VYDIT +SF K + WVKEL+K I + + GNK DL
Sbjct: 94 RYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLHDN 153
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R+V +DA+ YA+ TSAK I ++F E+++R+
Sbjct: 154 RSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRL 194
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 13/205 (6%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT ++ R+ +D FN I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+ SF+ + W++ + + D+ I GNK D+ +
Sbjct: 69 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
R V +E EK AQ G TSAK+N ++ F +L++ +L K + S
Sbjct: 129 RVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPD---------STDE 179
Query: 196 SMRRNVVVVEDEDLPTSSSTKSGCC 220
R V V+ P S+ GCC
Sbjct: 180 QSRDTVNPVQ----PQRQSSSGGCC 200
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEGFFTLARDIMTK 172
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 117/197 (59%), Gaps = 6/197 (3%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGK+ ++LR+ +D + + HI+T+ F K LN+ GK + L IWDTAG
Sbjct: 7 FFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYD TD+DSF VK W+ E+ + ++ + GNK DL
Sbjct: 67 QERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIDRYACENVNKLLVGNKTDLV 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM------LEKAQEFDLAK 187
++ V A+ +A+S+G TSAK +EE F +++ + +++A + D
Sbjct: 127 NEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEAPKGDGVT 186
Query: 188 ASELSRRGSMRRNVVVV 204
S S+ G+ ++ + ++
Sbjct: 187 ISTPSKTGTKKKKLCLI 203
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 8/172 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K + + + IWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 69 ERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVA 128
Query: 133 ------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
E R V + + A+ G + F TSAK + + ++F+ + ++ E
Sbjct: 129 ADNDTDESLRKVSVAEGQALAEEEGLLFFETSAKTSHNVNDVFVAIGSKIPE 180
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 5 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 64
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ + GNK D+
Sbjct: 65 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNKCDVN 124
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
++R V +E EK A G TSAK N +E F L++
Sbjct: 125 EKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLAR 165
>gi|448087841|ref|XP_004196426.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359377848|emb|CCE86231.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 133/231 (57%), Gaps = 19/231 (8%)
Query: 1 MMANSLDRNSSSTYS-FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI 59
M NS S++ ++ FK+VLLGE VGK+S+V R+V++ F++ +T+ A+FL + + +
Sbjct: 1 MATNSSPEGSNNRFAQFKLVLLGESAVGKSSIVHRFVKNSFDDMRESTIGAAFLTQSVKL 60
Query: 60 AGKR--LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML 117
K + IWDTAGQER+ +L P+YYR +N A+ VYDIT SF + + W+KELKK
Sbjct: 61 PEKSATVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNRAQEWIKELKKQA 120
Query: 118 GNDICLTIAGNKIDLEKQRTVMQEDAEKYA---QSVGAVHF--HTSAKMNRGIEEMFLEL 172
+I + + GNK D++++R V QE+ ++Y Q+ G + SAK G+ E+F +
Sbjct: 121 PENITICLVGNKTDMQEEREVNQEEVDEYITQLQNEGTILISGECSAKSGDGVLEIFTHI 180
Query: 173 SQRMLEKAQEFDLAKASELSRRGSMRRNVVVVEDEDL---PTSSSTKSGCC 220
+ + + ++ S +R RR+ V DL P + +GCC
Sbjct: 181 ANALPVE----EVINNSPRNRSLGSRRSAGV----DLGRAPKQNQANTGCC 223
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + + I G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVEIDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T D+F VK W+ E+++ + + + GNK D Q
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNC-DVVNRVLVGNKNDAPNQ 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N +EEMF+ +++++L +E +A + +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTNETV 187
Query: 196 SMRR 199
++R+
Sbjct: 188 NLRK 191
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRL-NLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ L + + IWDTAGQE
Sbjct: 34 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 93
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + A++VYDIT +SF K + WVKEL+K I + + GNK DL
Sbjct: 94 RYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLHDN 153
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R+V +DA+ YA+ TSAK I ++F E+++R+
Sbjct: 154 RSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRL 194
>gi|443711048|gb|ELU04995.1| hypothetical protein CAPTEDRAFT_19151 [Capitella teleta]
Length = 204
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 7/194 (3%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
++ + SS +FK+++LG+ VGKT ++ RY +D F E +++T+ ++ + +
Sbjct: 1 MNGDPSSQLAFKILVLGDSSVGKTCLIHRYCDDTFYETYVSTIGIDCKQRETMLDQIPVR 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
L IWDTAGQERF L YYR + G +LV+DIT+EDSF + W+K +++M DIC +
Sbjct: 61 LRIWDTAGQERFRTLTTAYYRGAQGILLVFDITNEDSFSHLSYWLKNIEEMGSADICKVL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
GNK DLEK R V + A K A++ G F TS K N + F L+ + KA E
Sbjct: 121 VGNKCDLEKDRAVPTDRATKLAKNFGVKFFETSCKTNECVTAAFEYLASMIKAKADE--- 177
Query: 186 AKASELSRRGSMRR 199
+L + GS++R
Sbjct: 178 ----KLEKHGSLQR 187
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 12/212 (5%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N Y FK++L+G+ VGK+S++LR+ +D + E +I+T+ F + + + GK + L I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERF + YYR ++G ++VYD+TD +SF VK W+ E+ + ++ + GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYACENVNKLLVGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DLE +R V E +++A +G TSAK + +E+ FL ++ ++ KA+ + A
Sbjct: 122 KCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI--KARMKNQPSA 179
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ ++ G R+ V +D S CC
Sbjct: 180 APATKPGVSLRSQQVKKD----------SSCC 201
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK +++G+ VGK+ ++L++ + +F +H T+ F ++ L I K++ L IWDTAG
Sbjct: 6 YLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QE F ++ YYR S G +LV+D+T SFE ++ W +E++ + I + I GNKIDLE
Sbjct: 66 QESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKIDLE 125
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE--- 190
++R V E+A +YAQ G +F TSAK ++ +F ++ ++L+K ++ E
Sbjct: 126 ERREVKTEEARRYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKIDSGEIDPTQEVYG 185
Query: 191 --LSRRGSMRRNVVVVEDE----DLPTSSSTKS-----GCC 220
+ G ++N VV E L T+S T+ GCC
Sbjct: 186 IKIGSIGIKKKNDVVQPREQPKAQLVTTSQTQQQGKSEGCC 226
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 101/161 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMILGNKCDVN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+R V ++ EK A G TSAK N +EE FL L++
Sbjct: 127 DKRQVSKDRGEKLALDYGIKFMETSAKANINVEEAFLTLAR 167
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT E SFE +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
++R V +E EK A G TSAK + +EE F L++ ++ + + + +
Sbjct: 127 ERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDIMARLMNYKILR 180
>gi|123481715|ref|XP_001323626.1| GTP-binding protein YPTM1 [Trichomonas vaginalis G3]
gi|121906494|gb|EAY11403.1| GTP-binding protein YPTM1, putative [Trichomonas vaginalis G3]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 123/207 (59%), Gaps = 17/207 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+K++++G+ VGK+S++L++ + F++ +++T+ F + L++ GK++ L IWDTAGQE
Sbjct: 10 YKILIIGDSAVGKSSILLQFSDQTFSDNYVSTIGVDFKIRTLDVDGKQVKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF ++ YY S+ LVYDITD SFE ++ WV ++ ++ +C I GNK DL +
Sbjct: 70 RFQSIVSNYYHGSHAIALVYDITDRKSFENLRKWVSDVDRLANKQVCRIIVGNKTDLSDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL--AKASELSR 193
R V +++ + +A S+G TSAK I+++F+++ Q + +++F L + EL
Sbjct: 130 RAVRRDEGQAFADSLGVPFIETSAKTANNIQQLFIQMCQAV---SRKFGLQSPRDQELD- 185
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ ++R P S K GCC
Sbjct: 186 QWTLR-----------PGQSVGKKGCC 201
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 13/207 (6%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK++L+G+ VGKTS++ R+ ED F+ +I+T+ F K + + GKR+ L IWDTAG
Sbjct: 7 FLFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRGKRIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFH + YYR + G V+VYDITDE SF+ + W++ ++ D+ + NK D+
Sbjct: 67 QERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIELHASEDVQKILLANKCDVI 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
++R V E EK A++ G TSA+ N I++ F +L++ +L K + + + R
Sbjct: 127 ERRAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEAILNKVTGDEQVEKTATVR 186
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
G R +S+ + GCC
Sbjct: 187 PGISR-------------TSTKRIGCC 200
>gi|349802645|gb|AEQ16795.1| putative member ras oncogene family [Pipa carvalhoi]
Length = 120
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 28/146 (19%)
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERFHALGPIYYR SNGA+LVYDITDEDSF+KV LEK
Sbjct: 1 ERFHALGPIYYRDSNGAILVYDITDEDSFQKV-------------------------LEK 35
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E AQ + AK + ++
Sbjct: 36 ERHVSIQEAEAYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQTDERAKGNGPTQS 95
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
G+ RR V +V+DE P + S GCC
Sbjct: 96 GTARRGVQIVDDE--PQAQSA-GGCC 118
>gi|156051994|ref|XP_001591958.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154705182|gb|EDO04921.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 241
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 23/200 (11%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
MA+S + S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K N+
Sbjct: 1 MADSTTSAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPT 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ + IWDTAGQERF +L P+YYR + A++VYD+T S K K+WV EL++ I
Sbjct: 61 RTIKFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGI 120
Query: 122 CLTIAGNKIDLEKQ-----------------------RTVMQEDAEKYAQSVGAVHFHTS 158
+ + GNK+DL + R V +A+ YA+ G + F TS
Sbjct: 121 VIALVGNKLDLTNESDDSNNNLGDEESAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETS 180
Query: 159 AKMNRGIEEMFLELSQRMLE 178
AK+ + E+F ++ + E
Sbjct: 181 AKLGTNVTEVFTAIANAIPE 200
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 105/166 (63%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ +D FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYD+T + +FE +KNW++ +++ D+ I GNK D++
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIEQHASEDVEKMILGNKCDVD 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E E+ A+ F TSAK N +EE FL +++ + +K
Sbjct: 127 DKRVVTKERGEQLAREYNVRFFETSAKANINVEEAFLTIARDIKKK 172
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 19/224 (8%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M+N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + + G
Sbjct: 1 MSNEFD------YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR ++G ++VYDITD +SF VK W+ E+ + + +
Sbjct: 55 KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ GNK DL + R V A+ YAQ VG TSAK + +EE FL +S +
Sbjct: 115 RNVLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDLPTSSSTKSGCCLT 222
K S+ + ++ R NVV ++ + S CC T
Sbjct: 170 -----KKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCST 208
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 112/182 (61%), Gaps = 21/182 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYV--------EDKFNEKHI--------TTLQASFLNKKLNI 59
FK+VLLGE VGK+S+VLR+V E + N+ H +T+ A+FL + +++
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKPGYDSNREFRMNKDHTADHTTDRESTIGAAFLTQTISL 78
Query: 60 -AGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG 118
+ IWDTAGQER+ +L P+YYR +N AV+VYDIT S +K K+WVKEL++
Sbjct: 79 DENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQAN 138
Query: 119 NDICLTIAGNKIDL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+I + +AGNK+DL +R + EDA YA+ G + F TSAK + + E+F +++
Sbjct: 139 ENIIIALAGNKLDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAK 198
Query: 175 RM 176
++
Sbjct: 199 KL 200
>gi|19114819|ref|NP_593907.1| GTPase Ypt5 [Schizosaccharomyces pombe 972h-]
gi|549812|sp|P36586.1|YPT5_SCHPO RecName: Full=GTP-binding protein ypt5
gi|396079|emb|CAA80223.1| ypt5 protein [Schizosaccharomyces pombe]
gi|2389005|emb|CAB11737.1| GTPase Ypt5 [Schizosaccharomyces pombe]
Length = 211
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 136/222 (61%), Gaps = 13/222 (5%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNI- 59
M +N+ +N T + K+VLLG+ VGK+S+VLR+V+D+F++ +T+ A+FL + L I
Sbjct: 1 MASNTAPKNVV-TINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPID 59
Query: 60 AGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN 119
+ L IWDTAGQER+ +L P+YYR +N A++VYDIT S EK K+W+KEL++
Sbjct: 60 ENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPE 119
Query: 120 DICLTIAGNKIDL-EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
I + +AGNK+DL +++R V + DAE YA + F TSAK + E+F +++++
Sbjct: 120 GIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL-- 177
Query: 179 KAQEFDLAKASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
E L +A RG++ R V + E P + + S C
Sbjct: 178 -PLEDKLNQA-----RGAVNRGVNLSEAR--PAAQPSGSCSC 211
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 5 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 64
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 65 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 124
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 125 DKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 170
>gi|158343283|gb|ABW35314.1| Rab1D [Karlodinium micrum]
Length = 263
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 120/201 (59%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
++S + ++++L+G+ VGKTS++LRY + F+E I T+ F K + + GK + + +
Sbjct: 2 SASYDHLYRLLLIGDASVGKTSLLLRYEQGVFSETFICTIGVDFRIKTVELEGKIVKVQV 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERF + YYR ++G +L +D+T SFE+ W++E++K +DI L + GN
Sbjct: 62 WDTAGQERFRTITSAYYRGAHGVLLCFDLTCRSSFERCAAWLEEIRKHARDDISLILVGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K D +R V+ E+AE +A S G + + TSAK + ++E FL L ++ K +
Sbjct: 122 KCDNSARREVLFEEAESFATSHGMLFYETSAKDDVNVQEAFLALVSALIAKGRPVVFTLL 181
Query: 189 SELSRRGSMRRNVVVVEDEDL 209
S S + S+R +V + E L
Sbjct: 182 SATSTKSSLRCSVAKLSGEVL 202
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 103/159 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K++L+G+ VGK+S++LR+ ED F++ I+T+ F + ++I G+++ L+IWDTAGQE
Sbjct: 13 LKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQE 72
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR +NG VLVYDIT E SF ++ W++ +++ ++C + GNK D+E +
Sbjct: 73 RFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHASENVCKILVGNKADMEDR 132
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
R V +E + A F TSAK + +EE F+ +++
Sbjct: 133 RVVSKEQGQALANEFRIKFFETSAKADINVEEAFVCIAR 171
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 105/163 (64%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+VLLGE GKTS+V R+V D F +++ T+ FL+K + + GK + L +WDTAGQE
Sbjct: 21 IKIVLLGEQSTGKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQE 80
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF L P Y R S+ A++VYDIT+ +SFE+VK WVK++K++ G+ + I GNK DL +
Sbjct: 81 RFRTLMPSYIRDSSAAIVVYDITNRESFERVKEWVKDIKELRGDKAIIVIVGNKTDLLDK 140
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
R V ++ E+ A + + TSAK I ++F ++ +L+
Sbjct: 141 RKVSYDEGEEEAGKLECLFCETSAKNGDNINDLFNTMATELLK 183
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 106/174 (60%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT ++ R+ ED FN I+T+ F K ++ GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYD+T+ SF+ + W++ +++ ++ I GNK D+E +
Sbjct: 70 RFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLRNIQEHAAEEVDKMILGNKCDMEDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
R + +E E ++ G TSAK N IE F+EL++ +L++ + + S
Sbjct: 130 RVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDRTPGIEEPRPS 183
>gi|403222371|dbj|BAM40503.1| small GTP binding protein rab6 [Theileria orientalis strain
Shintoku]
Length = 222
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 108/177 (61%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M +S S S K+VLLGE GKTS+V R+V D + + T+ FL+K + +
Sbjct: 1 MTSSDGMTSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQ 60
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
+ + L +WDTAGQERF +L P Y R S+ A++VYDIT+ +SFE+ +NW+K++K M G+
Sbjct: 61 RTMRLQLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFERTRNWIKDIKDMRGDKA 120
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ + GNK DL +RTV E+ E A+ + TSAK ++E+F ++ +L+
Sbjct: 121 VIVVVGNKTDLLDKRTVSFEEGESLAKEMNCFFRETSAKNGDNVQELFTLVASELLK 177
>gi|401827320|ref|XP_003887752.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998759|gb|AFM98771.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 105/164 (64%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
TY+FKVV+LG VGK+S+VL+YV+ +FN +T+ ASFL K + + IWDTA
Sbjct: 10 TYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQEGSIKFEIWDTA 69
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQER+++L P+YYR + A++VYDIT +SFE K WV+EL + + GNK DL
Sbjct: 70 GQERYNSLIPMYYRGAQVALIVYDITSAESFETAKRWVEELGFEKPKEFIKVLIGNKSDL 129
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E R V + ++YA S + F +SAK +GI E+F +++R+
Sbjct: 130 ESDRRVEYQQGKEYADSHNLLFFESSAKTGKGIAEIFNAIAERV 173
>gi|260797885|ref|XP_002593931.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
gi|229279163|gb|EEN49942.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
Length = 164
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+ LLG+ VGK+S+V+R+V D F +T+ ASF++K L + IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSLVVRFVTDTFTANLESTIGASFMSKTLVVNDTSYKFQIWDTAGQEK 66
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQR 136
+ L P+YYR + A++VYDIT E SF+ +K+W++ELK+ ++I L IAGNK D+E R
Sbjct: 67 YRGLAPMYYRGAAAAIVVYDITREGSFQTLKDWIRELKQYGADNIVLAIAGNKCDMEDLR 126
Query: 137 TVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
V A YA+ A+ TSAK + +MF +S+
Sbjct: 127 EVSTRMASDYAEENNAIFLETSAKTAHNVAQMFTLISE 164
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 11/177 (6%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 69 ERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVQ 128
Query: 133 ---------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
E R V E+ + A G + + TSAK + + ++F+ + ++ E A
Sbjct: 129 DDDEGQGEREGVRKVSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGIGNKIPEAA 185
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 15/206 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT ++ R+ +D FN I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+ SF+ + W++ + + D+ I GNK D+ +
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 136 RTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V +E EK AQ G + FH TSAK+N ++ F +L++ +L K E S
Sbjct: 130 RVVSRERGEKIAQDHG-IRFHETSAKLNVHVDTAFYDLAEAILAKMPE---------STD 179
Query: 195 GSMRRNVVVVEDEDLPTSSSTKSGCC 220
R V V+ P + GCC
Sbjct: 180 EQSRDTVNPVQ----PQRPGSSGGCC 201
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 202
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQE
Sbjct: 35 KLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQE 94
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+VYDIT +SF+K + WVKEL+K DI + + GNK DL ++
Sbjct: 95 RYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEK 154
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V ED + A+ G TSAK I ++F E+ +R+ A
Sbjct: 155 REVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPA 199
>gi|50557054|ref|XP_505935.1| YALI0F27181p [Yarrowia lipolytica]
gi|49651805|emb|CAG78747.1| YALI0F27181p [Yarrowia lipolytica CLIB122]
Length = 207
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+V R+V+D+F E+ +T+ A+FL + +++ K + IWDTAGQ
Sbjct: 15 FKLVLLGESFVGKSSLVTRFVKDEFLEQRESTIGAAFLTQTVSLEDNKTVRFEIWDTAGQ 74
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+ +L P+YYR +N AV+VYDIT S E+ K WVKEL+ + I + +AGNK+DLE
Sbjct: 75 ERYKSLAPMYYRNANCAVVVYDITQASSLERSKAWVKELQHRAADGIIIGLAGNKLDLED 134
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V E+A YA+ G + F TSA + E+F E+++++
Sbjct: 135 KREVPTEEARAYAEEAGLLFFETSALTGENVLELFTEIARKV 176
>gi|356527789|ref|XP_003532489.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%)
Query: 6 LDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
+ R + + K+VLLG+ GKTS+VLR+V+ +F+E +T+ A+F + L++ +
Sbjct: 1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQDSTIGAAFFTQVLSLNEATVK 60
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
IWDTAGQER+H+L P+YYR + A++VYDIT DSF + K WV+E+ + + +
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVLRQGNCQNVMFL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
NK DLE +R V E+ E+YA+ G TSAK + + E+F E+++R+
Sbjct: 121 VANKADLEAERKVRYEEGEEYAKENGLSFLETSAKTAQNVNELFYEIAKRL 171
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ D+ + GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNKCDVN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+R V +E EK A G TSAK N +E FL L++
Sbjct: 127 DKRQVSKERGEKLALEYGIKFMETSAKANINVENAFLTLAR 167
>gi|449551362|gb|EMD42326.1| GTP-binding protein RAB5 [Ceriporiopsis subvermispora B]
Length = 208
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 8/212 (3%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIW 69
S Y FK+VLLGE + T++ LR+V+D+F++ +T+ A+FL + + + + IW
Sbjct: 2 SKQYQFKLVLLGEMQIQYTTLFLRFVKDQFDDYRESTIGAAFLTQTVTLDDSSTVKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQER+ A P+YYR +N AV+VYDIT S EK ++W++EL++ I + + GNK
Sbjct: 62 DTAGQERYKA--PMYYRNANCAVVVYDITQAASLEKARSWIRELQRQADPSIVIALCGNK 119
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKAS 189
DL +R V QE+A+KYA G + TSAK G+ ++F +++++ + A A
Sbjct: 120 SDLAARRQVSQEEAKKYADEEGLMWGETSAKTGEGVTDIFTAIAKKLPQTAPPSARGAA- 178
Query: 190 ELSRRGSMRRN--VVVVEDEDLPTSSSTKSGC 219
SR G+ R V + + P S S C
Sbjct: 179 --SRPGTSARTGGVDLNKQAAGPNSQSEPCAC 208
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 19/224 (8%)
Query: 2 MANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG 61
M+N D Y FK++L+G+ VGK+ +LR+ +D + + +I+T+ F + + + G
Sbjct: 1 MSNEFD------YLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEG 54
Query: 62 KRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI 121
K + L IWDTAGQERF + YYR ++G ++VYDITD +SF VK W+ E+ + + +
Sbjct: 55 KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSV 114
Query: 122 CLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ GNK DL + R V A+ YAQ VG TSAK + +EE FL +S +
Sbjct: 115 RKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAI----- 169
Query: 182 EFDLAKASELSRRGSMRR---NVVVVEDEDLPTSSSTKSGCCLT 222
K S+ + ++ R NVV ++ + S CC T
Sbjct: 170 -----KKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCST 208
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 105/166 (63%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F+ L++ ++ +
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTR 172
>gi|123471026|ref|XP_001318715.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901481|gb|EAY06492.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 14/212 (6%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+S S K+VLLG+ VGKTS+ +Y+ K + T+ A+F+ K + + G+ + L IW
Sbjct: 2 STSATSVKLVLLGDSGVGKTSIATQYISGKAPQSVKPTIGAAFVTKSIVVDGQPVELLIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQE + L P+YYR + A++V+DIT + S++ V W+ ELK + + + NK
Sbjct: 62 DTAGQEVYRGLAPMYYRSALIAIVVFDITRQQSYDSVSYWINELKANADSRTIIVVCANK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF-LELSQRMLEKAQEFDLAKA 188
DLE QR V++ A+++A+S GA++ TSA GI+ MF + + + M ++A E
Sbjct: 122 TDLEDQRAVVEVTAQEFAESHGALYAATSATTGSGIDRMFQMAVGKLMKDQAGE------ 175
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+++ G V + E+++ TK GCC
Sbjct: 176 -PVNQNGKQGGGVALREEQN------TKKGCC 200
>gi|429329505|gb|AFZ81264.1| Ras related Rab1a small GTP-binding protein [Babesia equi]
Length = 200
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 102/165 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G+ VGK+ ++LR+ +D F + +ITT+ F + + + KR+ L IWDTAG
Sbjct: 11 YLFKLVLVGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTIKVNDKRVKLQIWDTAG 70
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G VL YD+TD+ SF+ + +W+ E+ K D C + GNK D++
Sbjct: 71 QERFRTITSTYYRGADGIVLAYDLTDKSSFDHISDWLAEVDKYAAEDTCKLLVGNKSDIQ 130
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ R V D ++ ++ V SAK +E+ F +++R++E
Sbjct: 131 ENRDVDPSDVKRLSELVNIPVMEVSAKTGENVEKAFFSITERLVE 175
>gi|308161368|gb|EFO63819.1| Rab2a [Giardia lamblia P15]
Length = 214
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 3/213 (1%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+SS Y FK +++G+ VGK+ ++L++ E +F H T+ + + + + GK++ I
Sbjct: 3 DSSYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQI 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDT GQE F ++ YYR S A+LVYDIT SFE V NW++E + G+ + + GN
Sbjct: 63 WDTCGQESFRSITRSYYRGSCCALLVYDITRRASFEHVANWLEECRTYGGDKTTILLVGN 122
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ--EFDLA 186
K D E R V ++ EK+A+ TSAK N +EE F+ +++ +L+K E D+
Sbjct: 123 KTDRESSRMVTYDEGEKFAKENNLFFIETSAKTNSNVEEAFMIIAKAVLDKVNSGEIDIT 182
Query: 187 KASELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
S + S +N V ++ E PT S GC
Sbjct: 183 DESCGVKAASTSKNTVNMKTE-TPTKESGGCGC 214
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 131/214 (61%), Gaps = 12/214 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR----LNLAIWDT 71
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I + IWDT
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTVKIKDGNEDVVIKFEIWDT 63
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKI 130
AGQER+ +L P+YYR +N A++VYD+T DS K ++WV+EL+ +G+ ++ + + GNK+
Sbjct: 64 AGQERYKSLAPMYYRNANAALVVYDVTQPDSLSKAQSWVQELQNKVGDEELVIYLVGNKV 123
Query: 131 DL----EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
D+ E R + E+ +YAQ+ + SAK G++++F E+ ++ L ++ L
Sbjct: 124 DIVEADESARKIETEEGAEYAQAQKLLFKEVSAKTGAGVKDIFQEIGEQ-LYSTKKASLK 182
Query: 187 KASELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ R S+ N V ++ + P+++ T S CC
Sbjct: 183 NKDQSRRTDSVSSNTVDIQTQ-RPSTNDT-SSCC 214
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ FN +ITT+ F + + + G+R+ L IWDTAGQE
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T D+F VK W+ E+++ + + + GNK D Q
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNC-DVVNRVLVGNKNDAPNQ 127
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V+ EDA+++A +G F TSAK N +EEMF+ +++++L +E +A + +
Sbjct: 128 KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTNETV 187
Query: 196 SMRR 199
++R+
Sbjct: 188 NLRK 191
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 15/178 (8%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKR------LNLAIW 69
FK+VLLG+ VGK+S+V R+V+D F+E +T+ A+FL++ + I K + IW
Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKIEDKGSQQEVVIKFEIW 63
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGN 128
DTAGQER+ +L P+YYR +N A++VYD+T +DS K + WV ELK +G +D+ + + GN
Sbjct: 64 DTAGQERYKSLAPMYYRNANAALVVYDVTQQDSLAKAQGWVNELKTKVGEDDLVICLVGN 123
Query: 129 KIDL--------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
K+DL K + V DAE YA G + SAK G++++F + +++ E
Sbjct: 124 KLDLCTEEGESSSKPKAVESSDAEGYANEQGLLFHEVSAKTGEGVKQVFQSIGEKLYE 181
>gi|432889723|ref|XP_004075330.1| PREDICTED: ras-related protein Rab-30-like [Oryzias latipes]
Length = 203
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 109/169 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G VGKT +V R+ + F T+ F+ K + I G+++ L IWDTAG
Sbjct: 8 YLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAG 67
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR +N +L YDIT EDSF + W++E+++ N + + GNKIDL
Sbjct: 68 QERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLV 127
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
++R V+++ AE +A++ ++ TSAK + +E++FL+L+ ++ +A++
Sbjct: 128 EKREVLRQRAEDFAEAQSMLYLETSAKESDNVEKLFLDLACELIREAKQ 176
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 10/215 (4%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S Y FK +++G+ VGK+ ++L++ + +F H T+ F + +NI GK++ L IWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
TAGQE F ++ YYR + GA+LVYDIT D+F + W+ + ++ +++ + + GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLDDARQHSSSNMVIMLIGNKS 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE--FDLAKA 188
DLE +R V +E+ E +A+ G V TSAK G+EE F+ ++ + EK QE FD+
Sbjct: 122 DLESRREVKREEGEAFAREHGLVFMETSAKTAAGVEEAFINTAREIYEKIQEGAFDINNE 181
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKS---GCC 220
+ + G ++ +P S ++ GCC
Sbjct: 182 ANGIKLGPQHQS-----GAGMPNSRGQQNQGGGCC 211
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 102/166 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SFE +KNW++ +++ D+ + GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNKCDIN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK N +E FL L++ + K
Sbjct: 127 DKRQVSKEMGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSK 172
>gi|388857378|emb|CCF49052.1| probable YPT6-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 218
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 109/179 (60%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+V LGE VGKTS++ R++ D F+ + T+ FL+K + + + + L +WDTAGQE
Sbjct: 19 FKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 78
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF +L P Y R S+ AV+VYDIT+ SF+ WV +++ GND+ + + GNK DL +
Sbjct: 79 RFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSDK 138
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRR 194
R V ++AEK AQ + TSAK ++ +F +++Q + ++ D+A A + +
Sbjct: 139 RQVTTDEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMDKDSDVANAGPTANK 197
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQE
Sbjct: 35 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQE 94
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+VYDIT ++F K + WVKEL+K DI + + GNK DL+++
Sbjct: 95 RYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLQEK 154
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +D YA+ G TSAK I ++F E+++R+
Sbjct: 155 REVPTQDGIDYAEKNGMFFMETSAKTADNINQLFEEIAKRL 195
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 101/164 (61%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT ++ R+ +D F I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+E SFE + W++ + + D+ I GNK D+ +
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E E A+ G TSAK N IEE F EL+Q +L+K
Sbjct: 130 RVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDK 173
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA-GKRLNLAIWDTAGQE 75
K+VLLG+ VGK+ +VLR+V +F+ T+ ASFL++ + + + IWDTAGQE
Sbjct: 35 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTIKFEIWDTAGQE 94
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
R+ AL P+YYR + AV+VYDIT ++F K + WVKEL+K DI + + GNK DL ++
Sbjct: 95 RYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLHEK 154
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V +D +YA+ G TSAK I ++F E+++R+
Sbjct: 155 REVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 195
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 12/207 (5%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGK+ ++LR+ +D + + +I+T+ F + +++ GK + L IWDTAG
Sbjct: 9 YLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWDTAG 68
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR ++G ++VYD+TD +SF +K W+ E+ + +++C + GNK DL
Sbjct: 69 QERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCDLV 128
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
+ V E A+ +A S+G TSAK + +EE FL +S + ++ +A + R
Sbjct: 129 DSKVVDTEKAKDFADSLGIPFIETSAKESINVEEAFLTMSSEIKKR-----MATQPTVER 183
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
R ++ V + P KS CC
Sbjct: 184 RPTVH-----VHMKGQPIQQ--KSSCC 203
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 103/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L + ++ K
Sbjct: 127 DKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLGRDIMTK 172
>gi|57526504|ref|NP_001002750.1| ras-related protein Rab-30 [Danio rerio]
gi|49901476|gb|AAH76437.1| RAB30, member RAS oncogene family [Danio rerio]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 107/169 (63%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK+VL+G VGKT +V R+ + F T+ F+ K + I G ++ L IWDTAG
Sbjct: 6 YLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAG 65
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR +N +L YDIT EDSF + W++E+++ N + + GNKIDL
Sbjct: 66 QERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLA 125
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+R V+++ AE++A S ++ TSAK + +E++FL+L+ ++ +A++
Sbjct: 126 DKREVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACELIREAKQ 174
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT V+ R+ +D FN I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+ SFE + W++ + + D+ + GNK D+E +
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
R V++ E+ A+ G F TSAK N IE+ FL L++ +L K
Sbjct: 130 RVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT V+ RY +D FN I+T+ F K + + GKR+ L IWDTAGQE
Sbjct: 15 FKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKLQIWDTAGQE 74
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT++ SF+ + W++ ++ D+ + GNK D E +
Sbjct: 75 RFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASADVERILIGNKCDWEAR 134
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V ++ A + G TSAK N IEE F +L++++L K
Sbjct: 135 RVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRK 178
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILARDIMTK 172
>gi|313226482|emb|CBY21627.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 121/203 (59%), Gaps = 16/203 (7%)
Query: 19 VLLGEGCVGKTSVVLRYVEDKFNEKHI-TTLQASFLNKKLNIAGKRLNLAIWDTAGQERF 77
++ GE GKTS+V R+ + FNE + T+ A+FL K L+ R+ L IWDTAG ER+
Sbjct: 29 IISGESATGKTSLVERFRGNGFNEGCVQATIGAAFLTKTLDFEETRIRLDIWDTAGAERY 88
Query: 78 HALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRT 137
+L P+YYR ++GA++VYD+T DS+ + + W++ELK+ DI + + GNKIDL +QR
Sbjct: 89 ASLAPMYYRHASGALVVYDVTKRDSYVRAEKWIRELKEKAPKDIIVYLVGNKIDLVEQRA 148
Query: 138 VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRGSM 197
V E+ + A+ TSAK N+ + ++F+E +Q++ ++ DL +A+
Sbjct: 149 VSTEEGMELAEVFELEFIETSAKENKNVAQVFMEFAQKIADEKVNQDLTEAT-------- 200
Query: 198 RRNVVVVEDEDLPTSSSTKSGCC 220
V+ ++ P ++S S CC
Sbjct: 201 -----VIPVDNPPRNTS--SNCC 216
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGK+ ++LR+ +D + E +I+T+ F + L+I GK + L IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD TD +SF VK W+ E+ K ++ + GNK DL +
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKFASENVNKLLVGNKCDLVTK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSRRG 195
+ V + A+++A S+G TSAK + +E F+E+++ + ++ A++ + G
Sbjct: 129 KAVDTQMAQEFADSLGIPFLETSAKESSNVETAFIEMAKNIKKRV-------AAQGANSG 181
Query: 196 SMRRNVVVVEDEDLPTSSS--TKSGCC 220
+ ++ + P ++S KSGCC
Sbjct: 182 ATAGGRPLLTGNNRPATNSGGQKSGCC 208
>gi|390342152|ref|XP_003725599.1| PREDICTED: uncharacterized protein LOC586954 [Strongylocentrotus
purpuratus]
Length = 2021
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 94/147 (63%)
Query: 26 VGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYY 85
VGKTS+ R+VE + E + T+ +FL++ L A+WDTAGQERF AL P+ Y
Sbjct: 1402 VGKTSITNRFVEGRCEEVYGRTIGFAFLSRSLTFQNIEYRFALWDTAGQERFRALAPLVY 1461
Query: 86 RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEK 145
R + A++VYDITD+ SF++V W+ EL+ I + + GNK+DLE R V +E AE
Sbjct: 1462 RSAAAALIVYDITDQRSFDEVDFWISELRGNGPEGILIYVIGNKVDLESHRVVDREVAES 1521
Query: 146 YAQSVGAVHFHTSAKMNRGIEEMFLEL 172
YAQ+ G HFH+SAK G++E+F +
Sbjct: 1522 YAQTKGVFHFHSSAKTGEGVDEIFYHI 1548
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 64/97 (65%)
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+ YR + A++VYDITD+ SF++V W+ EL+ I + + GNK+DLE
Sbjct: 1301 RFRALAPLVYRSAAAALIVYDITDQRSFDEVDFWISELRGNGPEGILIYVIGNKVDLESH 1360
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
R V +E AE YAQ+ G HFH+SAK G++E+F +
Sbjct: 1361 RVVDREVAESYAQTKGVFHFHSSAKTGEGVDEIFYHM 1397
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT ++ R+ ED FN I+T+ F + + + GK++ L IWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ +KNW++ +++ +D+ I GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSDMN 126
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK + +EE F L++ ++ K
Sbjct: 127 DKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 104/164 (63%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT +++R+ ED FN +I+T+ F + I GK++ L +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQE 68
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE S+E ++NW+K +K+ + + GNK D+E +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENASAGVERMLLGNKCDMENK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +E EK A+ G F TSAK + ++E F L+ +L K
Sbjct: 129 RKVPKERGEKLAKEHGIRFFETSAKSSLNVDESFNTLATDILMK 172
>gi|346319675|gb|EGX89276.1| Rab5-like protein ypt51 [Cordyceps militaris CM01]
Length = 233
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 16/180 (8%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K N+ + + IWDTAGQ
Sbjct: 13 SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQ 72
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF +L P+YYR + A++VYDIT S K K+WV EL++ I + + GNK+DL
Sbjct: 73 ERFASLAPMYYRNAQAALVVYDITKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLAS 132
Query: 135 Q----------------RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ R V E+A+ YA+ + F TSAK + E+F ++ + E
Sbjct: 133 ESAGGDNGDDGDDSGDARKVPTEEAKTYAEDESLLFFETSAKTGVNVTEVFTAIANAIPE 192
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
N Y FK++L+G+ VGK+ ++LR+ +D + E +I+T+ F + + + GK + L I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
WDTAGQERF + YYR ++G ++VYD+TD+DSFE VK W++E+ + ++ + GN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDRYACENVNKLLVGN 121
Query: 129 KIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKA 188
K DL ++ V A+++A S+G TSAK +E+ F+ + A E
Sbjct: 122 KSDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTM-------AAEIKNRMG 174
Query: 189 SELSRRGSMRRNVVVVEDEDLPTSSSTKSGCC 220
++ G+ +++ + ++ + P SSS GCC
Sbjct: 175 PTMASGGAKKKDTLDIKAK--PASSS--GGCC 202
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 102/164 (62%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGKT V+ R+ +D FN I+T+ F K + + GK++ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RFH + YYR + G +LVYDIT+ SFE + W++ + + D+ + GNK D+E +
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 129
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V + E+ A+ G F TSAK N IE+ FL L++ +L K
Sbjct: 130 RVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRK 173
>gi|123445544|ref|XP_001311531.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121893344|gb|EAX98601.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+K+VLLG VGKTS++ RYV D+FN I+T Q +F K+LN+ + + L IWDTAGQE
Sbjct: 10 YKIVLLGPARVGKTSIIQRYVNDQFNINTISTTQTAFFQKELNVDNQIIVLDIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELK-KMLGNDICLTIAGNKIDLEK 134
R+H++ P+YYR ++G ++V+D+ D SF K K W+ ELK ++ D + + GNK DL+
Sbjct: 70 RYHSIIPMYYRDADGILIVFDLLDVTSFSKAKFWMNELKNNLVVKDTPIILVGNKHDLQS 129
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
R V +D + Q +F TSAK IEE+F ++ + ++
Sbjct: 130 LRVVDPQDITNFTQIENLEYFDTSAKTGFFIEEIFKKIGMKAMQ 173
>gi|444315776|ref|XP_004178545.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
gi|387511585|emb|CCH59026.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
Length = 212
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 127/213 (59%), Gaps = 7/213 (3%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
+S+ S K+VLLGE VGK+S+VLR+V + F+E T+ A+FL +++NI + IW
Sbjct: 2 NSNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGNHTIKFEIW 61
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
DTAGQERF +L P+YYR + A++VYD+T SF K ++WVKEL++ I + + GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELQEQANKGIIIALVGNK 121
Query: 130 IDL---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
D+ ++R V +E+AEK A+ G + F TSAK + E FL + +++ K + +
Sbjct: 122 ADIIEDGEERKVAREEAEKLAEEEGLLFFETSAKTGNNVNETFLAIGEKIPLK----NSS 177
Query: 187 KASELSRRGSMRRNVVVVEDEDLPTSSSTKSGC 219
A++ + N + D + ++S GC
Sbjct: 178 SANDQHHDTNNNNNQRIDLDNNPVDAASNAPGC 210
>gi|395536593|ref|XP_003770297.1| PREDICTED: ras-related protein Rab-17 [Sarcophilus harrisii]
Length = 385
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 124/210 (59%), Gaps = 15/210 (7%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+ FKVVLLG VGK+S+V+R +++ F E + T+ +F + + I L L IWDTA
Sbjct: 189 PFVFKVVLLGSSSVGKSSLVIRLIKNDFKEI-LPTMGCAFFTQMMEIDNSALKLEIWDTA 247
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND-ICLTIAGNKID 131
GQE++H++ +Y+R +N A+LVYDI ++DSF++ +NW KEL+ D I + + GNK D
Sbjct: 248 GQEKYHSVCHLYFRGANAAILVYDIANKDSFQRAQNWWKELENEFSPDEIVVILVGNKTD 307
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASEL 191
LE R V E+ + +A+S + TSAK+N + E F L++ +L++ ++
Sbjct: 308 LEDSREVTLEEGKAFAESKKLLFMETSAKLNYQVTEAFTALARELLKREEQ-----NGGQ 362
Query: 192 SRRGSMRRNVVVVEDEDLPTSSSTKSGCCL 221
+++G R DL T+ K+ CCL
Sbjct: 363 TQQGEPRV--------DLKTTRIVKNKCCL 384
>gi|397642236|gb|EJK75110.1| hypothetical protein THAOC_03182 [Thalassiosira oceanica]
Length = 197
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 117/187 (62%), Gaps = 9/187 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAG-------KRLNLA 67
S K+ +LGE VGK+S+ LR+V D+F +T+ ASF++K++ + + ++L
Sbjct: 5 SIKICILGESGVGKSSLALRFVSDEFKAYTESTIGASFMSKQVTLPSTENDERERLVSLK 64
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+WDTAGQE++ +L P+YYR S+ AVLVYDIT +FE+++ WV ELK + L + G
Sbjct: 65 LWDTAGQEKYRSLAPMYYRGSDAAVLVYDITK--TFEELRGWVYELKNNGPPGLALVVCG 122
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
NK DL++ R V E YA+++GA++ SAK +++MF E++ R+ K + L +
Sbjct: 123 NKSDLKEDRLVGPLKGEDYARTIGALYIECSAKTAHNVDKMFSEIASRVPPKMDDCLLEE 182
Query: 188 ASELSRR 194
+L +R
Sbjct: 183 NVDLGKR 189
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +K I + + IWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQ 68
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYDIT SF K ++WVKEL + DI + + GNK DL
Sbjct: 69 ERFQSLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLAE 128
Query: 133 ------EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
E R V E+ + A+ G + F TSAK + + ++F+ + ++
Sbjct: 129 NDNENEESLRKVSIEEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKI 178
>gi|45360657|ref|NP_989002.1| uncharacterized protein LOC394598 [Xenopus (Silurana) tropicalis]
gi|38174213|gb|AAH61274.1| hypothetical protein MGC75714 [Xenopus (Silurana) tropicalis]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++L+G+ VGK+S++LR+ ++ F+ +ITT+ F + L + G+R+ L IWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKSSLLLRFSDNSFSGSYITTIGVDFKIRTLVLDGERVKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T +SF VK W+ E+ + + +C + GNK D +
Sbjct: 70 RFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNC-DSVCTVLVGNKDDDPSR 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+ V DA+++A +G F TSAK NR +EEMFL +++ +L
Sbjct: 129 KRVEAADAKRFADQMGVRMFETSAKENRNVEEMFLSVTRMVL 170
>gi|223649372|gb|ACN11444.1| Ras-related protein Rab-35 [Salmo salar]
Length = 211
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ F+ +ITT+ F + ++I G+R+ L IWDTAGQE
Sbjct: 12 FKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDIDGERVKLQIWDTAGQE 71
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T+ +SF VK W+ E+ + N +C + GNK D +
Sbjct: 72 RFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEITQNCDN-VCKILVGNKNDDPSK 130
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+ V +DA ++ +SVG F TSAK N +EEMF+ + +L ++
Sbjct: 131 KQVDSQDAMRFGESVGVRVFETSAKENINVEEMFMAFTHMVLRTKKQ 177
>gi|348510173|ref|XP_003442620.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 209
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGK+S++LR+ ++ F+ +ITT+ F + ++I G+R+ L IWDTAGQE
Sbjct: 10 FKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDIDGERVKLQIWDTAGQE 69
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR ++G ++VYD+T+ +SF VK W+ E+ + N +C + GNK D +
Sbjct: 70 RFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDN-VCKILVGNKNDDPSK 128
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+ V +DA ++ +SVG F TSAK N +EEMF+ + +L +E
Sbjct: 129 KQVDTQDALRFGESVGVRVFETSAKENINVEEMFMAFTLMVLRAKKE 175
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 7/207 (3%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FKVVL G+ VGK++++LR+ +++FN TT+ F + ++I+GK + IWDTAG
Sbjct: 10 YLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQIWDTAG 69
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+ A+ YYR + GAVLVYDIT++ SFE V+ W++E+++ DI + I GNK DL+
Sbjct: 70 QERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGNKSDLK 129
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASELSR 193
R + E + AQ SA+ +++ F ++ Q++ + + L K ++S
Sbjct: 130 HLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTK-QLQKYDQMSH 188
Query: 194 RGSMRRNVVVVEDEDLPTSSSTKSGCC 220
+ D ++ TS + K GCC
Sbjct: 189 LQGEKL------DLEITTSGNKKQGCC 209
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,063,706,209
Number of Sequences: 23463169
Number of extensions: 114696644
Number of successful extensions: 420374
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17606
Number of HSP's successfully gapped in prelim test: 6677
Number of HSP's that attempted gapping in prelim test: 383895
Number of HSP's gapped (non-prelim): 25222
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)