RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8722
(223 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 153 bits (387), Expect = 7e-48
Identities = 69/166 (41%), Positives = 101/166 (60%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G+ VGKT V+ R+ ED FN I+T+ F + + + GKR+ L IWDTAG
Sbjct: 5 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 64
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR + G +LVYDIT+E SF+ ++NW++ +++ D+ I GNK D+
Sbjct: 65 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVN 124
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E EK A G TSAK N +E F L++ + K
Sbjct: 125 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 170
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 149 bits (377), Expect = 2e-46
Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K++L+G+ VGK+ +++R+VEDKFN ITT+ F K ++I GK++ L IWDTAGQE
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF + YYR + G +LVYDITDE +F +K W K + + ++ L + GNK D+ +
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ET 121
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V + E A+ +G +SAK + + E+F L++ + EK
Sbjct: 122 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 141 bits (357), Expect = 2e-43
Identities = 64/168 (38%), Positives = 108/168 (64%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK+VL+G VGKT +V R+ + F T+ F+ K + I G+++ L IWDTAG
Sbjct: 4 FLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG 63
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR +N +L YDIT E+SF + W++E+++ N + + GNKIDL
Sbjct: 64 QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLA 123
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
++R V Q+ AE+++++ + TSAK + +E++FL+L+ R++ +A+
Sbjct: 124 ERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 171
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 140 bits (354), Expect = 1e-42
Identities = 61/177 (34%), Positives = 110/177 (62%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++L+G VGK+ ++LR+ +D + +I+T+ F K + + GK + L IWDTAG
Sbjct: 5 YLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAG 64
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF + YYR S+G ++VYD+TD++SF VK W++E+ + + + + GNK DL+
Sbjct: 65 QERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLK 124
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAKASE 190
+R V + A+++A + TSA + +E+ FL +++++ E + +L + ++
Sbjct: 125 DKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQ 181
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 139 bits (351), Expect = 2e-42
Identities = 58/164 (35%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKH-ITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+FKV+L+G+ VGKT +++R+ + F I+T+ F NK L++ G ++ L +WDTA
Sbjct: 5 VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTA 64
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQERF ++ YYR ++ +L+YD+T++ SF+ ++ W+ E+ + +D+ L + GNK+D
Sbjct: 65 GQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDS 124
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+R V +ED EK A+ G TSAK ++ F +++ +
Sbjct: 125 AHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 168
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 137 bits (346), Expect = 8e-42
Identities = 133/165 (80%), Positives = 151/165 (91%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
YSFKVVLLGEGCVGKTS+VLRY E+KFN+KHITTL ASFL KKLNI GKR+NLAIWDTAG
Sbjct: 2 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAG 61
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERFHALGPIYYR SNGA+LVYDITDEDSF+KVKNWVKEL+KMLGN+ICL I GNKIDLE
Sbjct: 62 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLE 121
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
K+R V ++AE YA+SVGA H+HTSAK N+GIEE+FL+L +RM+E
Sbjct: 122 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 136 bits (342), Expect = 3e-41
Identities = 62/166 (37%), Positives = 96/166 (57%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK++++G VGKTS + RY +D F ++T+ F K + KR+ L IWDTAG
Sbjct: 4 YMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAG 63
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+ + YYR + G +L+YDIT+E+SF V++W ++K ++ + + GNK D+E
Sbjct: 64 QERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDME 123
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V E + A +G F SAK N +++ F L + EK
Sbjct: 124 DERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 135 bits (341), Expect = 6e-41
Identities = 59/173 (34%), Positives = 98/173 (56%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FKVVL+G+ VGK++++ R+ ++FN + +T+ F + + + GK + IWDTAG
Sbjct: 3 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 62
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QER+ + YYR + GA+LVYDI ++E V+ W+KEL+ ++I + + GNK DL
Sbjct: 63 QERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 122
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
R V ++A +A+ TSA + +EE F + + + +A
Sbjct: 123 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA 175
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 135 bits (340), Expect = 7e-41
Identities = 56/163 (34%), Positives = 100/163 (61%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
Y FK +++G+ VGK+ ++ ++ E KF T+ F + + ++G+++ L IWDTAG
Sbjct: 3 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 62
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF A+ YYR + GA++VYDIT ++ + +W+ + + + + + + GNK DLE
Sbjct: 63 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 122
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
QR V E+A+++A+ G + SAK +E+ FLE ++++
Sbjct: 123 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 133 bits (335), Expect = 5e-40
Identities = 60/170 (35%), Positives = 107/170 (62%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+Y FK +++G+ VGK+ ++L++ + +F H T+ F + +NI GK++ L IWDTA
Sbjct: 1 SYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTA 60
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL 132
GQE F ++ YYR + GA+LVYDIT ++F + +W+++ ++ +++ + + GNK DL
Sbjct: 61 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL 120
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
E +R V +E+ E +A+ G + TSAK +EE F+ ++ + K Q+
Sbjct: 121 ESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 170
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 133 bits (335), Expect = 6e-40
Identities = 56/164 (34%), Positives = 97/164 (59%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K++++GE VGK+S++LR+ +D F+ + T+ F K +++ G + LAIWDTAGQ
Sbjct: 7 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 66
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ERF L P YYR + G +LVYD+T D+F K+ NW+ EL+ + + + ++
Sbjct: 67 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE 126
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
R V + + K+A+ + SAK G++ F EL +++++
Sbjct: 127 NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 170
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 131 bits (331), Expect = 2e-39
Identities = 57/168 (33%), Positives = 101/168 (60%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ FK +++G GK+ ++ +++E KF + T+ F +K +N+ GK + L IWDTAG
Sbjct: 4 FLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG 63
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
QERF ++ YYR + GA+LVYDIT +++ + NW+ + + + +I + + GNK DL+
Sbjct: 64 QERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLD 123
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
R V +A ++AQ + TSA +EE F++ ++++L K +
Sbjct: 124 ADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIE 171
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 126 bits (317), Expect = 2e-37
Identities = 60/161 (37%), Positives = 101/161 (62%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+V LGE VGKTS++ R++ D F+ + T+ FL+K + + + + L +WDTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF +L P Y R S AV+VYDIT+ +SF++ W+ +++ G+D+ + + GNK DL +
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 120
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R V E+ E+ A+ + + TSAK ++++F ++ +
Sbjct: 121 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 126 bits (318), Expect = 2e-37
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGK----------R 63
Y K++ LG+ VGKT+ + RY ++KFN K ITT+ F K++ + +
Sbjct: 4 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 63
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKV-KNWVKELKKMLGNDIC 122
++L +WDTAGQERF +L ++R + G +L++D+T + SF V + +
Sbjct: 64 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 123
Query: 123 LTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
+ + GNK DL QR V + A + A G +F TSA + +E+ L ++++ ++
Sbjct: 124 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 183
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 116 bits (291), Expect = 3e-33
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K V++G+G VGKT +++ Y +KF +++ T+ + I G+ L ++DTAGQ
Sbjct: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD-NYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E + L P+ Y ++ ++ + + SFE VK + G +IDL
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121
Query: 135 QRTV------------MQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEKAQ 181
+ E AEK A+ + AV + SA +G++ +F E LE +
Sbjct: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181
Query: 182 E 182
Sbjct: 182 P 182
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 115 bits (289), Expect = 3e-33
Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FKV+LLG+G VGK+S++ RYV +KF+ + T+ FLNK L + G + + IWDTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML----GNDICLTIAGNKID 131
RF +L +YR S+ +L + + D SF+ + NW KE I GNKID
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLE 178
+ +R V E+A+ + + G + TSAK + F E +R+L
Sbjct: 127 I-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 173
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 114 bits (286), Expect = 9e-33
Identities = 69/164 (42%), Positives = 113/164 (68%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
FK+VLLGE VGK+S+VLR+V+ +F+E +T+ A+FL + + + + IWDTAGQ
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 65
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
ER+H+L P+YYR + A++VYDIT+E+SF + KNWVKEL++ +I + ++GNK DL
Sbjct: 66 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLAN 125
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+R V ++A+ YA + TSAK + + E+F+ +++++ +
Sbjct: 126 KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 114 bits (286), Expect = 1e-32
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 9 NSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAI 68
+ K V++G+G VGKT +++ Y D F E+++ T+ + + GK+ L +
Sbjct: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD-HYAVSVTVGGKQYLLGL 61
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
+DTAGQE + L P+ Y M++ ++ + + + SF+ VK K ++ + G
Sbjct: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121
Query: 129 KIDL------------EKQRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQR 175
+IDL K++ + E +K A+ +GA + SA +G++ +F E
Sbjct: 122 QIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181
Query: 176 MLE 178
+L
Sbjct: 182 ILT 184
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 112 bits (281), Expect = 7e-32
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K V++G+G VGKT +++ Y + F ++I T+ ++ + GK +NL +WDTAGQ
Sbjct: 5 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV-MVDGKPVNLGLWDTAGQ 63
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E + L P+ Y ++ +++ + + SFE V+ + + + + G K+DL
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 123
Query: 135 QRTVMQE------------DAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEK 179
+ +++ A+ +GAV + SA RG++ +F E + +L
Sbjct: 124 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP 181
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 111 bits (278), Expect = 1e-31
Identities = 76/161 (47%), Positives = 105/161 (65%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV LLG+ VGK+S++ R+VED F+ T+ ASF+ K + + IWDTAG E
Sbjct: 5 LKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLE 64
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
RF AL P+YYR S A++VYDIT E++F +KNWV+EL++ I + IAGNK DL
Sbjct: 65 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 124
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
R VM+ DA+ YA S+ A+ TSAK I E+F+E+S+R+
Sbjct: 125 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 111 bits (278), Expect = 1e-31
Identities = 72/168 (42%), Positives = 107/168 (63%), Gaps = 3/168 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S K+VLLGE VGK+S+VLR+V + F E T+ A+FL +++ I + IWDTAGQ
Sbjct: 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 62
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL-- 132
ERF +L P+YYR + A++VYD+T SF K ++WVKEL + DI + + GNKID+
Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQ 122
Query: 133 -EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V +E+ EK A+ G + F TSAK + ++FL + +++ K
Sbjct: 123 EGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 110 bits (276), Expect = 3e-31
Identities = 50/163 (30%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+KVV+LG G VGK+++ +++V F EK+ T++ F K++ + L I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIED-FYRKEIEVDSSPSVLEILDTAGTE 62
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLEK 134
+F ++ +Y + G +LVY + ++ SF+ +K ++ ++ + + + GNK+DLE
Sbjct: 63 QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLES 122
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRML 177
+R V + A+ G TSAK ++E+F E+ ++M
Sbjct: 123 EREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMN 165
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 107 bits (266), Expect = 9e-30
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+ + K+V++G G VGK+++ +++++ F + T++ K ++ G L I DTA
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIED-SYTKICSVDGIPARLDILDTA 62
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI-AGNKID 131
GQE F A+ Y R +G +LV+ I D SF +V ++ ++ D + GNK D
Sbjct: 63 GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
LE QR V + +A + S +F SAK+ ++E F +L + + + ++
Sbjct: 123 LESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 173
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 105 bits (263), Expect = 2e-29
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 1/164 (0%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
+ K+V++G G VGK+S++ RY + F + + T+ FL +++ + + + L +WDTAGQ
Sbjct: 2 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 61
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEK 134
E F A+ YYR + VLV+ TD +SFE + +W +++ +G+ I + NKIDL
Sbjct: 62 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGD-IPTALVQNKIDLLD 120
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
+ E+AE A+ + + TS K + + E+F L+++ L+
Sbjct: 121 DSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 105 bits (261), Expect = 4e-29
Identities = 49/165 (29%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV+++G G VGK+++ L+++ D+F E + T +A KK+ + G+ + + I DTAGQE
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQE 63
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLEK 134
+ A+ Y+R G + V+ IT+ +SF ++ +++ ++ + ++ + GNK DLE
Sbjct: 64 DYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLED 123
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+R V E+A+ A + TSAK ++++F +L + + +
Sbjct: 124 KRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 103 bits (258), Expect = 9e-29
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 5/162 (3%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK++++G+ VGKT + R+ +F ++ T+ F + ++I G+R+ + +WDTAGQE
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 76 RFHALG-PIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML-GNDICLTIAGNKIDLE 133
RF YYR + V VYD+T+ SF + W++E K+ L NDI + GNK DL
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 122
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAK---MNRGIEEMFLEL 172
V + A+K+A + F TSAK N +E +F+ L
Sbjct: 123 SAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 104 bits (259), Expect = 1e-28
Identities = 54/173 (31%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 11 SSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
S +++V++G G VGK+++ +++++ F + T++ K+ I + L I D
Sbjct: 1 SMQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIED-SYTKQCVIDDRAARLDILD 59
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI-AGNK 129
TAGQE F A+ Y R G +LV+ +TD SFE++ + +++ ++ D I GNK
Sbjct: 60 TAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNK 119
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
DL+ QR V QE+ ++ A+ + + SAK+ +++ F EL R++ K QE
Sbjct: 120 ADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELV-RVIRKFQE 171
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 101 bits (253), Expect = 5e-28
Identities = 49/164 (29%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+K+V++G G VGK+++ ++ +++ F +++ T++ S+ + + G+ L I DTAGQE
Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVID-GETCLLDILDTAGQE 62
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLEK 134
+ A+ Y R G + V+ I + SFE + + +++K++ +D+ + + GNK D
Sbjct: 63 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-LA 121
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLE 178
RTV A+ A+S G + TSAK +G+E+ F L + + +
Sbjct: 122 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 101 bits (252), Expect = 1e-27
Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K+V++G+ GKT+++ + +D F E ++ T+ I +R+ L++WDT+G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFE-NYTASFEIDTQRIELSLWDTSGSPY 62
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE--- 133
+ + P+ Y S+ ++ +DI+ ++ + V K + + + + G K DL
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDV 122
Query: 134 ---------KQRTVMQEDAEKYAQSVGAVHFH-TSAKMN-RGIEEMFLELSQRMLEK 179
+Q V + A+ +GA + SA + + ++F + + K
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 179
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 100 bits (250), Expect = 2e-27
Identities = 45/167 (26%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
++K+V++G+G VGK+++ +++ + F + T++ S+ K I + L + DTAGQ
Sbjct: 4 TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQ 62
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDIC-LTIAGNKIDLE 133
E F A+ Y R +G ++VY +TD+ SFE V + + + ++ + + + NK+DL
Sbjct: 63 EEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLM 122
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAK-MNRGIEEMFLELSQRMLEK 179
R V ++ ++ A + TSAK +++ F +L + + ++
Sbjct: 123 HLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 101 bits (251), Expect = 2e-27
Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
KV++LG+ VGKTS++ +YV KF+ ++ T+ A FL K++ + + + + IWDTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNW----VKELKKMLGNDICLTIAGNKID 131
RF +LG +YR ++ VLV+D+T ++F+ + +W + + + + GNKID
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL 185
LE ++ + +F TSAK +E+ F +++ L++ E +L
Sbjct: 123 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 176
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 100 bits (248), Expect = 4e-27
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+V++G+G GKT +++ +D+F E ++ T+ + + GK++ LA+WDTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFE-NYVADIEVDGKQVELALWDTAGLE 61
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+ L P+ Y ++ ++ + I DS E + K ++ + + GNK DL
Sbjct: 62 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 121
Query: 136 RTV------------MQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLE 178
E+ A +GA + SAK G+ E+F ++ L+
Sbjct: 122 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 177
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 99.4 bits (246), Expect = 7e-27
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLA-IWDTAGQ 74
KV++LG+ VGKTS++ RYV DK+++++ T+ A FL K++ + G ++ +WDTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 75 ERFHALGPIYYRMSNGAVLVYDITDEDSFE----KVKNWVKELKKMLGNDICLTIAGNKI 130
ERF +LG +YR ++ VLVYD+T+ SFE ++ I GNKI
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 131 DLEKQRTVMQE-DAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEKAQ 181
D E+ + ++ E A++ A+S+G + TSAK ++ F E+++ L++ Q
Sbjct: 123 DAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ 175
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 98.1 bits (243), Expect = 2e-26
Identities = 50/163 (30%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+K+V+LG G VGK+++ +++V+ F EK+ T++ K++ + ++ L I DTAG E
Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIED-SYRKQVEVDCQQCMLEILDTAGTE 62
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVK-ELKKMLGNDICLTIAGNKIDLEK 134
+F A+ +Y + G LVY IT + +F +++ + L+ D+ + + GNK DLE
Sbjct: 63 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLED 122
Query: 135 QRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRM 176
+R V +E + A+ F +SAK + E+F +L +++
Sbjct: 123 ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 94.7 bits (234), Expect = 4e-25
Identities = 47/169 (27%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
FK+VL+G+G GKT+ V R++ +F +K++ TL + + +WDTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQ 135
+F L YY + A++++D+T +++ V NW ++ + +I + + GNK+D++ +
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD-LVRVCENIPIVLCGNKVDIKDR 122
Query: 136 RTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ-EF 183
+ + + + ++ SAK N E+ FL L+++++ EF
Sbjct: 123 KVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEF 169
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 93.6 bits (231), Expect = 9e-25
Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
+++++G GKT+++ + + T + K ++ +WD GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE-----TVEYKNISFTVWDVGGQDK 56
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKE-LKKMLGNDICLTIAGNK---IDL 132
L Y++ + G + V D D + + + + L + D L + NK +
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 116
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ + + T A G+ E LS ++
Sbjct: 117 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 91.6 bits (226), Expect = 6e-24
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
++V + G G VGK+S+VLR+V+ F E +I T++ ++ + ++ L I DT G
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTY-RQVISCDKSICTLQITDTTGSH 61
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN--DICLTIAGNKIDLE 133
+F A+ + + +LVY IT S E++K +++ ++ G+ I + + GNK D
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 121
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V +AE A++ TSAK+N ++E+F EL +
Sbjct: 122 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 167
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 89.3 bits (220), Expect = 5e-23
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K+ + G VGK+++V+R++ +F ++ TL++++ + I + +++ I DTAGQE
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTY-RHQATIDDEVVSMEILDTAGQE 61
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKIDLEK 134
+ R G VLVYDITD SFE+V L ++ ++ L + GNK DL+
Sbjct: 62 DTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDH 120
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRG-IEEMFLELSQRMLEK 179
R V E+ EK A + + SA G I E+F EL + + +
Sbjct: 121 SRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRR 166
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 87.7 bits (216), Expect = 2e-22
Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 9/183 (4%)
Query: 1 MMANSLDRNSSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIA 60
+ ++ D+ S ++++LG GKT+++ R + T ++
Sbjct: 3 IFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE-----TLS 57
Query: 61 GKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGND 120
K L L +WD GQ YY + + V D TD+D + + +
Sbjct: 58 YKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQ 117
Query: 121 ICLTI-AGNKIDLEKQRTV---MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+ NK D + +E + +SA GI E L +
Sbjct: 118 DAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 177
Query: 177 LEK 179
E+
Sbjct: 178 KEE 180
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 86.5 bits (213), Expect = 6e-22
Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 9/169 (5%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
++++LG GKT+++ + + T K + +WD
Sbjct: 9 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-----KNVKFNVWDV 63
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKI 130
GQ++ L YY + G + V D D D ++ + + + D + I NK
Sbjct: 64 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 123
Query: 131 DLEKQRT---VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
DL + ++ + + A G+ E L+
Sbjct: 124 DLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 84.7 bits (208), Expect = 3e-21
Identities = 31/177 (17%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
S ++ +LG+ GK+S++ R++ + T + K++ + G+ + I +
Sbjct: 2 SIPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTE--SEQYKKEMLVDGQTHLVLIREE 59
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKM-----LGNDICLTIA 126
AG + ++ + V+ + DE+SF+ V +L + G + L
Sbjct: 60 AGAPDAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGT 114
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEKAQE 182
++I R V A + ++ T A ++ +F E++Q+++ ++
Sbjct: 115 QDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQ 171
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 84.8 bits (208), Expect = 3e-21
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+ S K+ +LG VGK+S+ +++VE +F + + T++ +F K + + G+ +L + DTA
Sbjct: 2 SKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTA 60
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWV-KELKKMLGNDICLTIAGNKID 131
GQ+ + Y NG +LVY +T SFE +K K L + I + + GNK D
Sbjct: 61 GQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKD 120
Query: 132 LEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLEL 172
L +R + E+ + A+S A +SAK N+ ++F +
Sbjct: 121 LHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRI 161
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 82.9 bits (203), Expect = 1e-20
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+KV+LLG VGK+++ + + + ++ + + G+ +L ++D Q+
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGPEAEAA--GHTYDRSIVVDGEEASLMVYDIWEQD 59
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI-AGNKIDLEK 134
L M + V+VY +TD+ SFEK +L++ D I GNK DL +
Sbjct: 60 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVR 119
Query: 135 QRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
R V ++ A TSA ++ ++ +F + +++ +
Sbjct: 120 SREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLR 164
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 82.4 bits (202), Expect = 2e-20
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+ KV+++G GKT+++ ++ ++ T N +WD
Sbjct: 12 NHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNT-----RFLMWDI 66
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKE-LKKMLGNDICLTIAGNKI 130
GQE + YY + ++V D TD + + + + L L I NK
Sbjct: 67 GGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQ 126
Query: 131 DLEKQRT---VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
D+++ T + Q + A G+ + + R+
Sbjct: 127 DVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 78.4 bits (192), Expect = 1e-18
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 19/171 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K++LLG G GK++ + + + + T + + + D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHGS--GVPTTGIIE----YPFDLQSVIFRMVDVGGQR 56
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDS-----------FEKVKNWVKELKKMLGNDICLT 124
+ + + +++ D E + + + +
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVI 116
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQR 175
+ NK DL +++ + + + + G +A+ I +MF++L+
Sbjct: 117 LFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREF--ILKMFVDLNPD 165
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 77.7 bits (190), Expect = 2e-18
Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 9/171 (5%)
Query: 10 SSSTYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
S+ +++LLG GKT+++ + + + T + + L +W
Sbjct: 11 SAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQS-----QGFKLNVW 65
Query: 70 DTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGN 128
D GQ + Y+ ++ + V D D FE+ + EL + + + + I N
Sbjct: 66 DIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 125
Query: 129 KIDLEKQRT---VMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
K DL + + + SA G+++ + + +
Sbjct: 126 KQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 77.4 bits (189), Expect = 2e-18
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 16/169 (9%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
K++ LG GKT+++ D+ TLQ ++ +A + +D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-----ATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLEKQ 135
L Y+ NG V + D D + F++ + + L + D+ I GNKID
Sbjct: 57 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 116
Query: 136 RTVMQ----------EDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQ 174
+ + +++ F S M G E F LSQ
Sbjct: 117 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 77.2 bits (189), Expect = 3e-18
Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 20/175 (11%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K++LLG G GK++ + + + T + K + + D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIHE----YDFEIKNVPFKMVDVGGQR 55
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWV-------KELKKMLGN----DICLT 124
+ + + ++ D + ++ N ++ +
Sbjct: 56 SERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSII 115
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ NK DL +++ + + + + G H + + E F + ++
Sbjct: 116 LFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKF--LVECFRGKRRDQQQR 168
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 76.2 bits (186), Expect = 4e-18
Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 9/168 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
++++LG GKT+++ ++ + T+ + + + L IWD GQ+
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDV-----DTISPTLGFNIKTLEHRGFKLNIWDVGGQK 57
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKIDLEK 134
+ Y+ ++G + V D D + + ++ L L I NK DL
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPG 117
Query: 135 QRTV---MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ + +S SA + L + +
Sbjct: 118 ALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 165
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 75.6 bits (184), Expect = 8e-18
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFN-EKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
++VVL+GE VGK+++ + + + L + L + G+ + + D
Sbjct: 2 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMW 61
Query: 73 -GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG-NDICLTIAGNKI 130
+ L ++ + ++VY ITD SFEK +L++ DI + + GNK
Sbjct: 62 ENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 121
Query: 131 DLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
DL + R V + A TSA + ++E+F + +++ +
Sbjct: 122 DLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR 170
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 75.1 bits (183), Expect = 1e-17
Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 9/168 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
++++LG GKT+++ R + T + K L +WD G
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEVVTTIPT-----IGFNVETVTYKNLKFQVWDLGGLT 60
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKE-LKKMLGNDICLTIAGNKIDLEK 134
YY ++ + V D D D K+ + L++ L + NK D+E+
Sbjct: 61 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 120
Query: 135 QRTV---MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
T + F TSA G++E L + + +
Sbjct: 121 AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 168
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 72.8 bits (177), Expect = 9e-17
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 8/165 (4%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
++ L+G GKT+ V +FNE I T+ + I + + +WD GQ
Sbjct: 3 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM----RKITKGNVTIKLWDIGGQP 58
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKE-LKKMLGNDICLTIAGNKIDLE- 133
RF ++ Y R + V + D D++ E KN + L K I + + GNK DL
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 118
Query: 134 --KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
++ ++++ Q + S K I+ L Q
Sbjct: 119 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 163
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 69.6 bits (169), Expect = 2e-15
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 23/175 (13%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
K++LLG G GK+++V + I K L+ ++D GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETH---------FTFKDLHFKMFDVGGQR 53
Query: 76 RFHALGPIYYRMSNGAVLVYDITDEDSF-----------EKVKNWVKELKKMLGNDICLT 124
+ + ++D D E +K + D +
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSII 113
Query: 125 IAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEK 179
+ NK DL +++ Y + G+ + +A I+ F +L++R K
Sbjct: 114 LFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAY---IQCQFEDLNKRKDTK 165
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 69.4 bits (169), Expect = 4e-15
Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 28/201 (13%)
Query: 14 YSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
+ +++LLG G GK+++V + + T ++N ++D G
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRILHV----VLTSGIFE----TKFQVDKVNFHMFDVGG 56
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWV-------KELKKMLGN----DIC 122
Q + + V + + + N K + N I
Sbjct: 57 QRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTIS 116
Query: 123 LTIAGNKIDLEKQRTVMQEDA-EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQ 181
+ + NK DL ++ + + E Y A G + +A+
Sbjct: 117 VILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRV--------TRAK 168
Query: 182 EFDLAKASELSRRGSMRRNVV 202
F + +S R+
Sbjct: 169 YFIRDEFLRISTASGDGRHYC 189
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 67.0 bits (162), Expect = 1e-14
Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 21/180 (11%)
Query: 12 STYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT 71
+ K+V LG GKT+++ +D+ + T + + +D
Sbjct: 10 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPT-----LHPTSEELTIAGMTFTTFDL 64
Query: 72 AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGN-DICLTIAGNKI 130
G + + Y NG V + D D + + K + L ++ + I GNKI
Sbjct: 65 GGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKI 124
Query: 131 DLEKQRTV---------------MQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQR 175
D + + + K + F S +G E F ++Q
Sbjct: 125 DRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQY 184
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 62.3 bits (150), Expect = 1e-12
Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 10/199 (5%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQER 76
V+ +G GKT + +R + ++ + T++ S K+N I +
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 77 FHALGPIYYRMSNGAVLVYDITDEDSF-EKVKNWVKEL---KKMLGNDICLTIAGNKIDL 132
L + + V V D + V ++ ++ L N L IA NK D+
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI 120
Query: 133 EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDL----AKA 188
++ + ++ + + + SA + K EF +
Sbjct: 121 AMAKSA-KLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEF 179
Query: 189 SELSRRGSMRRNVVVVEDE 207
E S +G +
Sbjct: 180 LECSAKGGRGDTGSADIQD 198
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 49.6 bits (117), Expect = 4e-08
Identities = 26/200 (13%), Positives = 57/200 (28%), Gaps = 16/200 (8%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTA 72
+Y +++ G GKTS++ D + + + ++
Sbjct: 1 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRP-TVVSQEPLSAADYDGSGVTLVDFPGHVKL 59
Query: 73 GQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLG----NDICLTIAGN 128
+ L + +V D ++ ++ + N I + IA N
Sbjct: 60 RYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACN 119
Query: 129 KIDLEKQRT--VMQEDAEK------YAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKA 180
K +L R +++ E + E L
Sbjct: 120 KSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQ---STDG 176
Query: 181 QEFDLAKASELSRRGSMRRN 200
+F +AS ++ GS+ +
Sbjct: 177 FKFANLEASVVAFEGSINKR 196
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 43.6 bits (101), Expect = 3e-06
Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 13/167 (7%)
Query: 16 FKVVLLGEGCVGKTSVVLRYV-EDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
KVV+ G GK+S++ + I L + ++I G L++ +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 75 ERFHALGPIYYRMSNGA-----VLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNK 129
R VL E L + +T+ NK
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 130 IDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
D+ + ++ G SA+ G++ + L Q M
Sbjct: 122 ADITG-------ETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 161
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 42.8 bits (99), Expect = 8e-06
Identities = 31/179 (17%), Positives = 55/179 (30%), Gaps = 11/179 (6%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRY-------VEDKFNEKHITTLQASFLNKKLNIAGKRLN 65
TYS V ++G+ VGK++++ + + ++ +
Sbjct: 3 TYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPG 62
Query: 66 LAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTI 125
L A E N V V D+ + E K L + + +
Sbjct: 63 LHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARA--LKPLVGKVPILL 120
Query: 126 AGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
GNK+D K + + A SA R + E+ +L M E +
Sbjct: 121 VGNKLDAAKYPEEAMKAYHELLP--EAEPRMLSALDERQVAELKADLLALMPEGPFFYP 177
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 41.2 bits (95), Expect = 2e-05
Identities = 16/177 (9%), Positives = 53/177 (29%), Gaps = 6/177 (3%)
Query: 13 TYSFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDT- 71
+Y + ++G VGK++++ + + K + ++ G + +
Sbjct: 3 SYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPG 62
Query: 72 ----AGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
+ + LV + + + V + G +
Sbjct: 63 LHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRE-GKAPVILAVN 121
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
+++++ ++ +Q SA+ ++ + + + + E F
Sbjct: 122 KVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFP 178
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 36.2 bits (82), Expect = 0.001
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 20/182 (10%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKF---NEKHITTLQASFLNKKLNIAGKRLNLAI------ 68
++ G VGK++++ R K +T K I +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELK-------KMLGNDI 121
++ + + AVLV D K E+ + DI
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 122 CLTIAGNKID-LEKQRTVMQEDAEKYAQSVGAVH---FHTSAKMNRGIEEMFLELSQRML 177
+A NK+D ++ + V+ AEK+ + + SAK IE + + + +
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVIR 182
Query: 178 EK 179
E+
Sbjct: 183 ER 184
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 35.1 bits (79), Expect = 0.003
Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 6/171 (3%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKF----NEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
V+++G VGK+++ + V+ K +E+ +T + K ++
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLE 133
Q+ + + K + + + + NK +
Sbjct: 63 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENL 122
Query: 134 KQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFD 184
++ + E Y+ G SA+ N ++ M + +++ EK + +
Sbjct: 123 REFE-REVKPELYSLGFGEPIP-VSAEHNINLDTMLETIIKKLEEKGLDLE 171
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 35.1 bits (79), Expect = 0.003
Identities = 21/169 (12%), Positives = 51/169 (30%), Gaps = 10/169 (5%)
Query: 16 FKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQE 75
+V G GK+S + K + T + L +A + + + E
Sbjct: 17 IEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAE 76
Query: 76 RFHALGPIYY---------RMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
+ + R S ++V + + ++ + L
Sbjct: 77 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTK 136
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQ 174
+K+ ++ + E G V S+ +G++++ +L
Sbjct: 137 ADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDT 185
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 34.3 bits (77), Expect = 0.005
Identities = 22/178 (12%), Positives = 55/178 (30%), Gaps = 13/178 (7%)
Query: 15 SFKVVLLGEGCVGKTSVVLR-------YVEDKFNEKHITTLQASFLNKK----LNIAGKR 63
+ KV ++G VGK+++ V F++ + ++ AG R
Sbjct: 8 AIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLR 67
Query: 64 LNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL 123
+ ++ + ++ V+V D T + + + ++ + +
Sbjct: 68 RKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVF 127
Query: 124 TIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFH-TSAKMNRGIEEMFLELSQRMLEKA 180
+ EK+ + + + TSA I+ M ++
Sbjct: 128 NKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRM-IDAMNLAYASY 184
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 31.7 bits (70), Expect = 0.041
Identities = 21/169 (12%), Positives = 46/169 (27%), Gaps = 9/169 (5%)
Query: 17 KVVLLGEGCVGKTSVVLRYVEDK---------FNEKHITTLQASFLNKKLNIAGKRLNLA 67
++ L G VGK+S + + K + + + +++ G
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 68 IWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAG 127
I R AV+ + LK I +
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 128 NKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRM 176
+KI K + + S++ +G +E + + + +
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMI 193
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 30.8 bits (68), Expect = 0.073
Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 16/180 (8%)
Query: 18 VVLLGEGCVGKTSVVLRYVEDKF---NEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
V L+G GK+S++ T N + + + D G
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSP----NLGVVEVSEEERFTLADIPGI 59
Query: 75 ----ERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKI 130
LG + R ++ + D K++ D L + +
Sbjct: 60 IEGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLE-TLRKEVGAYDPALLRRPSLV 118
Query: 131 DLEKQRTVMQEDAEKYAQSV---GAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLAK 187
L K + +E + A ++ G SA G+ + E ++ ++ K
Sbjct: 119 ALNKVDLLEEEAVKALADALAREGLAVLPVSALTGAGLPAL-KEALHALVRSTPPPEMPK 177
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 30.1 bits (67), Expect = 0.23
Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 7/161 (4%)
Query: 16 FKVVLLGEGCVGKTSVV--LRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAG 73
V + GE GK+S + LR + ++ T + + + N+ WD G
Sbjct: 57 LNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPG 116
Query: 74 QERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGNKIDL- 132
+ Y + I + KN + K + K+D
Sbjct: 117 IGSTNFPPDTYLEKMKFYEYDFFIIISAT-RFKKNDIDIAKAISMMKKEFYFVRTKVDSD 175
Query: 133 ---EKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFL 170
E D EK Q + +T + +FL
Sbjct: 176 ITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFL 216
>d1xcra1 d.290.1.2 (A:3-315) Hypothetical protein PTD012 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 313
Score = 29.3 bits (66), Expect = 0.32
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 25/128 (19%)
Query: 6 LDRNSSSTYSFKVVLLGE--GCVGKTSVVL------RYVEDKFNEKHITTLQASFLNKKL 57
L++ S + F+ LL G+ V+ R F TL+ + NK +
Sbjct: 140 LEKYSEKCHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPI 199
Query: 58 NIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKML 117
+ G + G+ + H + + +S E+V W+ +M
Sbjct: 200 GMGGTFIIQK-----GKVKSHIMPA-----------EFSSCPLNSDEEVNKWLH-FYEMK 242
Query: 118 GNDICLTI 125
+CL +
Sbjct: 243 APLVCLPV 250
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 27.7 bits (60), Expect = 0.96
Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 45/152 (29%)
Query: 69 WDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIAGN 128
DT G E F L +++ A+L+ DI + F+ + +M + N
Sbjct: 75 IDTPGHEAFTTLRKRGGALADLAILIVDINE--GFKPQTQEALNILRMYRTPFVVAA--N 130
Query: 129 KIDLEKQRTV-----------------MQEDAEKYAQSVGAVH----------------- 154
KID V Q+ K + VG +H
Sbjct: 131 KIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFAS 190
Query: 155 ----FHTSAKMNRGIE---EMFLELSQRMLEK 179
SA GI M + L+Q+ L +
Sbjct: 191 QVSIIPISAITGEGIPELLTMLMGLAQQYLRE 222
>gi|152988212|ref|YP_001348091.1|(1-96:96) muconolactone
delta-isomerase [Pseudomonas aeruginosa PA7]
gi|150963370|gb|ABR85395.1| muconolactone
delta-isomerase [Pseudomonas aeruginosa PA7] E=1e-44
s/c=1.89 id=85% cov=101%
Length = 96
Score = 26.6 bits (59), Expect = 1.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 59 IAGKRLNLAIWDTAGQERFHAL 80
IAG N +++D G E H
Sbjct: 46 IAGHYANYSVFDLPGVEALHDT 67
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]}
Length = 175
Score = 27.4 bits (60), Expect = 1.2
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 52 FLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVK 111
+ + G + W TAG + G G + D E + E+V+ WVK
Sbjct: 103 TIRDIIEPRGATIVGH-WPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVK 161
Query: 112 ELKKMLGNDICL 123
++ + L D L
Sbjct: 162 QISEELHLDEIL 173
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 26.5 bits (57), Expect = 1.9
Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 21/163 (12%)
Query: 17 KVVLLGEGCVGKTSVVLR-------YVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIW 69
++V++G+ VGK++++ R V D + + L +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 70 DTAGQERFH---ALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICLTIA 126
ER L I ++ + V D + E K + K I
Sbjct: 62 TNDLVERLGIERTLQEI--EKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDV 119
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMF 169
KI+ E+ + + D SA G+E++
Sbjct: 120 VEKINEEEIKNKLGTDRH---------MVKISALKGEGLEKLE 153
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 26.4 bits (57), Expect = 2.3
Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 14/185 (7%)
Query: 18 VVLLGEGCVGKTSVV-------LRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWD 70
V L+G VGK++++ + + F + + + L
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGA 63
Query: 71 TAGQERFHALGPIYYRMSNGAVLVYDITDEDSFEKVKNWVKELKKMLGNDICL----TIA 126
G H R ++ E + N I
Sbjct: 64 HQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIV 123
Query: 127 GNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQEFDLA 186
NK+D+ + + +A K + F SA G+ E+ E++ LE EF L
Sbjct: 124 ANKMDMPEAAENL--EAFKEKLTDDYPVFPISAVTREGLRELLFEVAN-QLENTPEFPLY 180
Query: 187 KASEL 191
EL
Sbjct: 181 DEEEL 185
>d1vp2a_ c.51.4.1 (A:) Putative inosine/xanthosine triphosphate
pyrophosphatase TM0159 {Thermotoga maritima [TaxId:
2336]}
Length = 189
Score = 26.3 bits (57), Expect = 2.4
Identities = 11/60 (18%), Positives = 25/60 (41%)
Query: 107 KNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSAKMNRGIE 166
+ V+E+K + + + + KI++ + E++ K A G H + G+
Sbjct: 11 PHKVEEIKMIAPEWMEILPSPEKIEVVEDGETFLENSVKKAVVYGKKLKHPVMADDSGLV 70
>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 128
Score = 25.3 bits (55), Expect = 4.0
Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 22/103 (21%)
Query: 102 SFEKVKNWVKELKKMLGNDICLT------------------IAGNKIDLEKQRTVMQEDA 143
S E+VK W + L+ ++ ++ L I+ + K + + A
Sbjct: 2 SQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKA 61
Query: 144 ----EKYAQSVGAVHFHTSAKMNRGIEEMFLELSQRMLEKAQE 182
++ + + LE + ++AQ+
Sbjct: 62 KKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQK 104
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 25.9 bits (56), Expect = 4.1
Identities = 16/141 (11%), Positives = 41/141 (29%), Gaps = 16/141 (11%)
Query: 15 SFKVVLLGEGCVGKTSVVLRYVEDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQ 74
S ++++G+G VGK+S V + ++ + S + + ++ R +
Sbjct: 32 SLTILVMGKGGVGKSSTVNSIIGER---VVSISPFQSEGPRPVMVSRSRAGFTLNIIDTP 88
Query: 75 ERFHALGPIYYRMS-----------NGAVLVYDITDEDSFEKVKNWVKELKKMLGNDI-- 121
++ + + V + K K + G I
Sbjct: 89 GLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWN 148
Query: 122 CLTIAGNKIDLEKQRTVMQED 142
+A + ++
Sbjct: 149 KAIVALTHAQFSPPDGLPYDE 169
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120
[TaxId: 1163]}
Length = 169
Score = 25.4 bits (55), Expect = 4.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 90 GAVLVYDITDEDSFEKVKNWVKELKKMLG 118
G L D + + +++K+WV +LK G
Sbjct: 140 GLALDEDNQSDLTDDRIKSWVAQLKSEFG 168
>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus)
[TaxId: 9913]}
Length = 86
Score = 24.0 bits (52), Expect = 6.9
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 100 EDSFEKVKNWVKELKKMLGNDICLTIAGNKIDLEKQRTVMQEDAEKYAQSVGAVHFHTSA 159
+ F+K VK LK ++ L I KQ TV + E+ G + F A
Sbjct: 2 QAEFDKAAEEVKHLKTKPADEEMLFIYS----HYKQATVGDINTERP----GMLDFKGKA 53
Query: 160 KMN 162
K +
Sbjct: 54 KWD 56
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli
[TaxId: 562]}
Length = 214
Score = 24.7 bits (53), Expect = 9.4
Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 37 EDKFNEKHITTLQASFLNKKLNIAGKRLNLAIWDTAGQERFHALGPIYYRMSNGAVLVYD 96
E + T + + + + N+ + + W + H Y + +G + D
Sbjct: 135 EMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGW---AYGIHDGLLRDLD 191
Query: 97 ITDEDSFEKVK 107
+T + E ++
Sbjct: 192 VT-ATNRETLE 201
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.366
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 780,573
Number of extensions: 35313
Number of successful extensions: 295
Number of sequences better than 10.0: 1
Number of HSP's gapped: 237
Number of HSP's successfully gapped: 88
Length of query: 223
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 141
Effective length of database: 1,281,736
Effective search space: 180724776
Effective search space used: 180724776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)