BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8727
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5SPP0|CLVS2_DANRE Clavesin-2 OS=Danio rerio GN=clvs2 PE=2 SV=1
Length = 329
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + L+ AK EL+E+ T + ++R I I R D F+LRFLR++KF
Sbjct: 4 LQAGLSPETLEKAKVELKENPDTLHQDIQEVRDMIITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
+ A L +Y R D+ F L +P +++ LK G+ D+ GR++++
Sbjct: 64 NHFEAFRLLAQYFEYRQQNLDM-FKNLKATDPGIKQALKDGFPGVLSNLDRYGRKILVLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ +YT +L+ ++ E ++ED E QV GFV D + +F + TP
Sbjct: 123 AANWDQSRYTFVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R IH +N P +AL + + +K RKRI
Sbjct: 183 AIEGLQDSFPARFGGIHFVN-QPWYIHALYTVIRPFLKDKTRKRI 226
>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal
PE=2 SV=3
Length = 343
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 14 TSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSV 73
S+++ + A+ EL+E R + LR + K + LD FLLRFLR++KF
Sbjct: 34 CSLTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPYLSTSLDDAFLLRFLRARKFDY 93
Query: 74 PMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPG 133
A + L Y R ++ ++ FS L P ++++L G+L P D G V+ RP
Sbjct: 94 DRALQLLVNYHGCRRSWPEV-FSNLRPS--ALKDVLNSGFLTVLPHTDPRGCHVLCIRPD 150
Query: 134 VFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVRIV 193
+ P Y + ++ +T E L++ EE QV G V D GVS + F P A +++
Sbjct: 151 RWIPSNYPITENIRAVYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVI 210
Query: 194 KNGERTLPMRHKEIHIIN 211
+ P+R K +HI+N
Sbjct: 211 GILQDGFPIRIKAVHIVN 228
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 237 VSVIVNARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLG 296
+S ++ FLLRFLR++KF A + L Y R ++ ++ FS L P ++++L G
Sbjct: 73 LSTSLDDAFLLRFLRARKFDYDRALQLLVNYHGCRRSWPEV-FSNLRPS--ALKDVLNSG 129
Query: 297 YIRV 300
++ V
Sbjct: 130 FLTV 133
>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL
PE=2 SV=2
Length = 342
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 14 TSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSV 73
S+++ + A+ EL+E R + LR + K + LD FLLRFLR++KF
Sbjct: 33 CSLTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDY 92
Query: 74 PMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPG 133
A + L Y R ++ ++ F+ L P ++++L G+L P D G V+ RP
Sbjct: 93 DRALQLLVNYHSCRRSWPEV-FNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPD 149
Query: 134 VFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVRIV 193
+ P Y + ++ +T E L++ EE QV G V D GVS + F P A +++
Sbjct: 150 RWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVI 209
Query: 194 KNGERTLPMRHKEIHIIN 211
+ P+R K +H++N
Sbjct: 210 GILQDGFPIRIKAVHVVN 227
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 237 VSVIVNARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLG 296
+S ++ FLLRFLR++KF A + L Y R ++ ++ F+ L P ++++L G
Sbjct: 72 LSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEV-FNNLKPS--ALKDVLASG 128
Query: 297 YIRV 300
++ V
Sbjct: 129 FLTV 132
>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL
PE=2 SV=1
Length = 342
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 14 TSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSV 73
S+++ + A+ EL+E R + LR + K + LD FLLRFLR++KF
Sbjct: 33 CSLTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDY 92
Query: 74 PMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPG 133
A + L Y R ++ ++ F+ L P ++++L G+L P D G V+ RP
Sbjct: 93 DRALQLLVNYHSCRRSWPEV-FNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPD 149
Query: 134 VFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVRIV 193
+ P Y + ++ +T E L++ EE QV G V D GVS + F P A +++
Sbjct: 150 RWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVI 209
Query: 194 KNGERTLPMRHKEIHIIN 211
+ P+R K +H++N
Sbjct: 210 GILQDGFPIRIKAVHVVN 227
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 237 VSVIVNARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLG 296
+S ++ FLLRFLR++KF A + L Y R ++ ++ F+ L P ++++L G
Sbjct: 72 LSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEV-FNNLKPS--ALKDVLASG 128
Query: 297 YIRV 300
++ V
Sbjct: 129 FLTV 132
>sp|P10123|RLBP1_BOVIN Retinaldehyde-binding protein 1 OS=Bos taurus GN=RLBP1 PE=1 SV=4
Length = 317
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 2 TKDRKPEELSVETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNS----------- 50
TKD P + + + LQ AK EL E E TRE+A+ +L++ + +
Sbjct: 27 TKDHGPV-FGPCSQLPRHTLQKAKDELNEKEETREEAVRELQELVQAEAASGQELAVAVA 85
Query: 51 -RIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELL 109
R+Q D+ F LRF+R++KF V A E L Y+ R Y +L F L P+ ++ +
Sbjct: 86 ERVQG--KDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPEL-FDSLSPE--AVRCTV 140
Query: 110 KLGYLFATPKRDKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVH 169
+ GY RDK GR V++ ++ + T +LQ + + E L+E+EE Q+ GF
Sbjct: 141 EAGYPGVLSTRDKYGRVVMLFNIENWDSEEITFDEILQAYCVILEKLLENEETQINGFCI 200
Query: 170 FNDGAGVSFPHLTLFTPKEAVRIVKNGERTLPMRHKEIHII 210
+ G + P + ++V + + P R K IH I
Sbjct: 201 IENFKGFTMQQAAGLRPSDLRKMVDMLQDSFPARFKAIHFI 241
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 242 NARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPK 285
++ F LRF+R++KF V A E L Y+ R Y +L F L P+
Sbjct: 92 DSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPEL-FDSLSPE 134
>sp|Q9Z275|RLBP1_MOUSE Retinaldehyde-binding protein 1 OS=Mus musculus GN=Rlbp1 PE=2 SV=3
Length = 317
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 2 TKDRKPEELSVETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNS----------- 50
TKD P + + + LQ AK EL E E TRE+A+ +L++ + +
Sbjct: 27 TKDHGPV-FGPCSQLPRHTLQKAKDELNEKEETREEAVRELQELVQAQAASGEELALAVA 85
Query: 51 -RIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELL 109
R+Q D+ FLLRF+R++KF V A E L+ Y+ R Y +L F L + ++ +
Sbjct: 86 ERVQA--RDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPEL-FDSLSME--ALRCTI 140
Query: 110 KLGYLFATPKRDKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVH 169
+ GY RDK GR V++ ++ + T +LQ + E L+E+EE Q+ GF
Sbjct: 141 EAGYPGVLSSRDKYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCI 200
Query: 170 FNDGAGVSFPHLTLFTPKEAVRIVKNGERTLPMRHKEIHIIN 211
+ G + P + ++V + + P R K IH I+
Sbjct: 201 VENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKAIHFIH 242
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 227 VSEKIRKRIKVSVIVNARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDL 277
V+E+++ R ++ FLLRF+R++KF V A E L+ Y+ R Y +L
Sbjct: 84 VAERVQAR-------DSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPEL 127
>sp|Q8BG92|CLVS2_MOUSE Clavesin-2 OS=Mus musculus GN=Clvs2 PE=2 SV=1
Length = 327
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + L+ A+ EL E+ T + ++R + I R D F+LRFLR++KF
Sbjct: 4 LQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P +++ LK G+ D GR++++
Sbjct: 64 HHFEAFRLLAQYFEYRQQNLDM-FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ +YT +L+ ++ E ++ED E QV GFV D + +F + TP
Sbjct: 123 AANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPNMLRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R IH +N P +AL + + EK RKRI
Sbjct: 183 AIEGLQDSFPARFGGIHFVN-QPWYIHALYTVIRPFLKEKTRKRI 226
>sp|Q95KF7|CLVS2_MACFA Clavesin-2 OS=Macaca fascicularis GN=CLVS2 PE=2 SV=2
Length = 327
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + L+ A+ EL E+ T + ++R + I R D F+LRFLR++KF
Sbjct: 4 LQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P +++ LK G+ D GR++++
Sbjct: 64 HHFEAFRLLAQYFEYRQQNLDM-FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ +YT +L+ ++ E ++ED E QV GFV D + +F + TP
Sbjct: 123 AANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R IH +N P +AL + + EK RKRI
Sbjct: 183 AIEGLQDSFPARFGGIHFVN-QPWYIHALYTVIRPFLKEKTRKRI 226
>sp|Q5SYC1|CLVS2_HUMAN Clavesin-2 OS=Homo sapiens GN=CLVS2 PE=2 SV=1
Length = 327
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + L+ A+ EL E+ T + ++R + I R D F+LRFLR++KF
Sbjct: 4 LQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P +++ LK G+ D GR++++
Sbjct: 64 HHFEAFRLLAQYFEYRQQNLDM-FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ +YT +L+ ++ E ++ED E QV GFV D + +F + TP
Sbjct: 123 AANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R IH +N P +AL + + EK RKRI
Sbjct: 183 AIEGLQDSFPARFGGIHFVN-QPWYIHALYTVIRPFLKEKTRKRI 226
>sp|P12271|RLBP1_HUMAN Retinaldehyde-binding protein 1 OS=Homo sapiens GN=RLBP1 PE=1 SV=2
Length = 317
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 2 TKDRKPEELSVETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNS----------- 50
TKD P + + + LQ AK EL E E TRE+A+ +L++ + +
Sbjct: 27 TKDHGPV-FGPCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVA 85
Query: 51 -RIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELL 109
R+Q D+ F LRF+R++KF+V A E L Y+ R Y +L F L P+ ++ +
Sbjct: 86 ERVQ--EKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPEL-FDSLSPE--AVRCTI 140
Query: 110 KLGYLFATPKRDKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVH 169
+ GY RDK GR V++ + + T +LQ + E L+E+EE Q+ GF
Sbjct: 141 EAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCI 200
Query: 170 FNDGAGVSFPHLTLFTPKEAVRIVKNGERTLPMRHKEIHIIN 211
+ G + + ++V + + P R K IH I+
Sbjct: 201 IENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIH 242
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 227 VSEKIRKRIKVSVIVNARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPK 285
V+E+++++ ++ F LRF+R++KF+V A E L Y+ R Y +L F L P+
Sbjct: 84 VAERVQEK-------DSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPEL-FDSLSPE 134
>sp|A6JUQ6|CLVS2_RAT Clavesin-2 OS=Rattus norvegicus GN=Clvs2 PE=1 SV=1
Length = 327
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + L+ A+ EL E+ T + ++R + I R D F+LRFLR++KF
Sbjct: 4 LQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P +++ LK G+ D GR++++
Sbjct: 64 HHFEAFRLLAQYFEYRQQNLDM-FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ +YT +L+ ++ E ++ED E QV GFV D + +F + TP
Sbjct: 123 AANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R IH +N P +AL + + EK RKRI
Sbjct: 183 AIEGLQDSFPARFGGIHFVN-QPWYIHALYTVIRPFLKEKTRKRI 226
>sp|Q5M7E1|CLVS1_XENLA Clavesin-1 OS=Xenopus laevis GN=clvs1 PE=2 SV=1
Length = 332
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
+ ++ + ++ + EL E+ T + Q+R I I R D F+LRFLR++KF
Sbjct: 4 LHAGLNPETIEKGRLELNENPDTLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF 63
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
+ A L +Y R D+ F L +P ++ L G+ RD GR++++
Sbjct: 64 NQMEAFRLLAQYFQYRQLNLDM-FKNLKADDPGIKRALMDGFPGVLENRDHYGRKILLLF 122
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ + + +L+ ++ E L+ED+E Q+ GF+ D + SF + TP
Sbjct: 123 AANWDQSRNSFVDILRAILLSLEVLIEDQELQINGFILIIDWSNFSFKQASKLTPSILRL 182
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R +H +N P +AL + + +K RKRI
Sbjct: 183 AIEGLQDSFPARFGGVHFVN-QPWYIHALYTIIKPFLKDKTRKRI 226
>sp|Q8IUQ0|CLVS1_HUMAN Clavesin-1 OS=Homo sapiens GN=CLVS1 PE=1 SV=1
Length = 354
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + ++ A+ EL E+ + Q+R I I R D F+LRFLR++KF
Sbjct: 26 LQAGLSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF 85
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P ++ L G+ RD GR++++
Sbjct: 86 HQADAFRLLAQYFQYRQLNLDM-FKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLF 144
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ + + + +L+ ++ E L+ED E Q+ GF+ D + SF + TP
Sbjct: 145 AANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKL 204
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R +H +N P +AL + + +K RKRI
Sbjct: 205 AIEGLQDSFPARFGGVHFVN-QPWYIHALYTLIKPFLKDKTRKRI 248
>sp|Q5RCA6|CLVS1_PONAB Clavesin-1 OS=Pongo abelii GN=CLVS1 PE=2 SV=1
Length = 354
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S + ++ A+ EL E+ + Q+R I I R D F+LRFLR++KF
Sbjct: 26 LQAGLSPETIEKARLELNENPDILHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF 85
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P ++ L G+ RD GR++++
Sbjct: 86 HQADAFRLLAQYFQYRQLNLDM-FKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLF 144
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ + + + +L+ ++ E L+ED E Q+ GF+ D + SF + TP
Sbjct: 145 AANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKL 204
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R +H +N P +AL + + +K RKRI
Sbjct: 205 AIEGLQDSFPARFGGVHFVN-QPWYIHALYTLIKPFLKDKTRKRI 248
>sp|A6JFQ6|CLVS1_RAT Clavesin-1 OS=Rattus norvegicus GN=Clvs1 PE=1 SV=1
Length = 354
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S ++ A+ EL E+ + Q+R I I R D F+LRFLR++KF
Sbjct: 26 LQAGLSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF 85
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P ++ L G+ RD GR++++
Sbjct: 86 HQADAFRLLAQYFQYRQLNLDM-FKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLF 144
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ + + + +L+ ++ E L+ED E Q+ GF+ D + SF + TP
Sbjct: 145 AANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKL 204
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R +H +N P +AL + + +K RKRI
Sbjct: 205 AIEGLQDSFPARFGGVHFVN-QPWYIHALYTLIKPFLKDKTRKRI 248
>sp|Q9D4C9|CLVS1_MOUSE Clavesin-1 OS=Mus musculus GN=Clvs1 PE=2 SV=1
Length = 354
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 12 VETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKF 71
++ +S ++ A+ EL E+ + Q+R I I R D F+LRFLR++KF
Sbjct: 26 LQAGLSPDTIEKARLELNENPDILHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF 85
Query: 72 SVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIAR 131
A L +Y R D+ F +P ++ L G+ RD GR++++
Sbjct: 86 HQADAFRLLAQYFQYRQLNLDM-FKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLF 144
Query: 132 PGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVR 191
++ + + + +L+ ++ E L+ED E Q+ GF+ D + SF + TP
Sbjct: 145 AANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKL 204
Query: 192 IVKNGERTLPMRHKEIHIINCHPSVKYALDFGLN-LVSEKIRKRI 235
++ + + P R +H +N P +AL + + +K RKRI
Sbjct: 205 AIEGLQDSFPARFGGVHFVN-QPWYIHALYTLIKPFLKDKTRKRI 248
>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1
Length = 278
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 8/214 (3%)
Query: 27 ELREDESTREDALIQLRQWITKNSRIQTCR-LDARFLLRFLRSKKFSVPMAEEALERYIL 85
EL + + L +LR+ + + QT + L FLLRFLR++ F + +A ++ Y
Sbjct: 16 ELPDHSPLLQPGLAELRRRVQEAGVPQTPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYK 75
Query: 86 LRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPGVFNPHKYTNSHM 145
R +L+ + L P+ ++ LLK GY RD G RV+I R ++P +T +
Sbjct: 76 WRAECPELS-ADLRPR--SILGLLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDV 132
Query: 146 LQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPHLTLFTPKEAVRIVKNGERTLPMRHK 205
++ +T E ++++ E Q G D G H TP A +I + P++ +
Sbjct: 133 FRVSLITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKVR 192
Query: 206 EIHIINCHPSVKYALDFGL--NLVSEKIRKRIKV 237
IH+IN P + +A+ F + ++EKI+ RI +
Sbjct: 193 GIHLIN-EPVIFHAV-FSMIKPFLTEKIKDRIHL 224
>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1
Length = 278
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 57 LDARFLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFA 116
L FLLRFLR++ F + +A L+ Y R +++ + L P+ ++ LLK GY
Sbjct: 47 LTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEIS-ADLHPR--SIIGLLKAGYHGV 103
Query: 117 TPKRDKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGV 176
RD G +V+I R ++P +T + ++ +T E ++++ E Q G D G
Sbjct: 104 LRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGW 163
Query: 177 SFPHLTLFTPKEAVRIVKNGERTLPMRHKEIHIINCHPSVKYALDFGL--NLVSEKIRKR 234
F H TP A +I + P++ + IH+IN P + +A+ F + ++EKI++R
Sbjct: 164 QFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLIN-EPVIFHAV-FSMIKPFLTEKIKER 221
Query: 235 IKV 237
I +
Sbjct: 222 IHM 224
>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1
SV=1
Length = 278
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 61 FLLRFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATPKR 120
FLLRFLR++ F + +A ++ Y R +L+ + L P+ ++ LLK GY R
Sbjct: 51 FLLRFLRARDFDLDLAWRLMKNYYKWRAECPELS-ADLHPR--SILGLLKAGYHGVLRSR 107
Query: 121 DKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVSFPH 180
D G RV+I R ++P +T + ++ +T E ++++ E Q G D G H
Sbjct: 108 DPTGSRVLIYRISYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQISH 167
Query: 181 LTLFTPKEAVRIVKNGERTLPMRHKEIHIINCHPSVKYALDFGL--NLVSEKIRKRIKV 237
TP A +I + P++ + IH+IN P + +A+ F + ++EKI+ RI +
Sbjct: 168 AFQITPSVAKKIAAVVTDSFPLKVRGIHLIN-EPVIFHAV-FSMIKPFLTEKIKGRIHL 224
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC14 PE=1 SV=3
Length = 304
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 32 ESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG 91
+S +E AL +LR+ + I+ RLD LLRFLR++KF V +A+E E R YG
Sbjct: 30 DSAQEKALAELRKLLEDAGFIE--RLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYG 87
Query: 92 DLAFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPGVFNPHKY----TNSHMLQ 147
L + + L+ Y K DK GR V G N H+ + ML+
Sbjct: 88 TDTI--LQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLK 145
Query: 148 IHGMTYETLME 158
YE++++
Sbjct: 146 NLVWEYESVVQ 156
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 206 EIHIINCHPSVKYALDFGLNLVSEK----IRKRIKVSVIV---NARFLLRFLRSKKFSVP 258
E + NC P L+ EK +RK ++ + + + LLRFLR++KF V
Sbjct: 11 ESYPQNCPPDALPGTPGNLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQ 70
Query: 259 MAEEALERYILLRNTYG 275
+A+E E R YG
Sbjct: 71 LAKEMFENCEKWRKDYG 87
>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=SEC14 PE=3 SV=2
Length = 492
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 56 RLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG------DLAFSKLDPKNPTMQELL 109
R D LLRFLR++KF VP+A+E E R +G D + + +E+
Sbjct: 51 RTDDATLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYKE-------KKEVA 103
Query: 110 KLGYLFATPKRDKLGRRVIIARPGVFNPHK 139
KL Y K DK GR V + G N H+
Sbjct: 104 KL-YPQYYHKTDKDGRPVYVENVGKVNIHE 132
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 246 LLRFLRSKKFSVPMAEEALERYILLRNTYG 275
LLRFLR++KF VP+A+E E R +G
Sbjct: 57 LLRFLRARKFDVPLAQEMWENCEKWRKEFG 86
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3
SV=1
Length = 302
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 32 ESTREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG 91
+ +E AL QLR + + RLD LLRFLR++KF V +A+E E R YG
Sbjct: 28 DEAQEGALKQLRSELEAAGFKE--RLDDSTLLRFLRARKFDVALAKEMFENCEKWRKEYG 85
Query: 92 DLAFSKLDPKNPTMQE-------LLKLGYLFATPKRDKLGRRVIIARPGVFN 136
N MQ+ L+ Y K DK GR V G N
Sbjct: 86 ---------TNTIMQDFHYDEKPLVAKYYPQYYHKTDKDGRPVYFEELGAVN 128
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 246 LLRFLRSKKFSVPMAEEALERYILLRNTYG 275
LLRFLR++KF V +A+E E R YG
Sbjct: 56 LLRFLRARKFDVALAKEMFENCEKWRKEYG 85
>sp|Q0V9N0|S14L5_XENTR SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1
Length = 707
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 35 REDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG-DL 93
+E ALI LRQW+ + + + + +LRFLR++ F++ A E L + + R + D
Sbjct: 251 QESALIHLRQWLQETHKGKIPK--DEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDY 308
Query: 94 AFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPG 133
P ++E G+ + DK GR + I R G
Sbjct: 309 ILQTWQPPR-VLEEYYAGGWHY----HDKDGRPLYILRLG 343
>sp|Q6ZPF3|TIAM2_MOUSE T-lymphoma invasion and metastasis-inducing protein 2 OS=Mus
musculus GN=Tiam2 PE=1 SV=2
Length = 1715
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 133 GVFNPHKYTNS---HMLQIHGMTYETLMEDEENQVRGFVHFNDGAGVS 177
G P K TNS H L ++G ++ + D +V+ +VHF D GV+
Sbjct: 797 GTQLPQKSTNSNKAHDLHLYGSAVDSALRDSMWEVQTYVHFQDNEGVT 844
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2
Length = 715
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 35 REDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG-DL 93
+E LI+LRQW+ + + + + +LRFLR++ F++ A E + + + R + D
Sbjct: 255 QESCLIRLRQWLQETHKGKIPK--DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDY 312
Query: 94 AFSKLDPKNPTMQELLKLGYLFATPKRDKLGRRVIIARPG 133
P ++L+ Y DK GR + + R G
Sbjct: 313 ILETWTPP-----QVLQDYYAGGWHHHDKDGRPLYVLRLG 347
>sp|Q0AYI2|PNP_SYNWW Polyribonucleotide nucleotidyltransferase OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=pnp PE=3 SV=1
Length = 703
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 180 HLTLFTPKEAVRIVKNGERTLPMRHKEIHIINCHPSVKYALDFGLNLVSEKIRKRIKVSV 239
HL + KEA+ +V+ G +P I H +K +DF N++ E +++V +
Sbjct: 175 HLAVAGTKEAIMMVEGGANEVPEETMRDAIFFAHEEIKKIVDFQENIIREVGLSKMQVEI 234
Query: 240 IVNARFLLRFLRSKKFSVPMAEEAL 264
+ + + + +F+ P+ EEA+
Sbjct: 235 PILDEEIKKAV--VEFATPLFEEAV 257
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2
Length = 308
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 33 STREDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG- 91
S E AL +LR+ + K + T RLD LLRFLR++KF V A E R G
Sbjct: 29 SEHEAALEELRK-VLKQAGF-TKRLDDSTLLRFLRARKFDVAAARAMFENCEKWRKENGV 86
Query: 92 DLAFSKLD-PKNPTMQELLKLGYLFATPKRDKLGRRVIIARPGVFN 136
D F + P + + Y K DK GR V I G N
Sbjct: 87 DTIFEDFHYEEKPLVAKFYPQYYH----KTDKDGRPVYIEELGAVN 128
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1
SV=2
Length = 310
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 35 REDALIQLRQWITKNSRIQTCRLDARFLLRFLRSKKFSVPMAEEALERYILLRNTYG 91
+E+AL+Q R + + + + RLD LLRFLR++KF + + E R YG
Sbjct: 29 QEEALLQFRSILLEKNYKE--RLDDSTLLRFLRARKFDINASVEMFVETERWREEYG 83
>sp|A7IA59|FEN_METB6 Flap endonuclease 1 OS=Methanoregula boonei (strain 6A8) GN=fen
PE=3 SV=1
Length = 333
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 77/198 (38%), Gaps = 28/198 (14%)
Query: 4 DRKPEELSVETSVSKQGLQIAKAELREDESTREDALIQLRQWITKNSRIQTCRLDARFLL 63
D KP EL ET+ ++ L+ E ++ R D RQ + +T ++ LL
Sbjct: 81 DGKPPELKQETNAERKKLRDEAGEKYKEAVERGDEEEAYRQARSATRVDETIIATSKELL 140
Query: 64 RFLRSKKFSVPMAEEALERYILLRNTYGDLAFSKLDPKNPTMQELLKLGYLFATP----K 119
L P EA +++ R GD F+ Q+ L LF P
Sbjct: 141 DLLGIPYVQAPSEGEAQAAFMVQR---GDARFA-------VSQDYDTL--LFGAPLLMRN 188
Query: 120 RDKLGRRVIIARPGVFNPHKYTNSHMLQIHGMTYETLMEDEENQVRGFVHFNDG-AGVSF 178
G+R I R NP + S +L +T E L+ E + FN G AGV
Sbjct: 189 LTVSGKRKIRGRAVTVNPERLVLSEVLSGLSLTREQLV---EVGILVGTDFNPGAAGVG- 244
Query: 179 PHLTLFTPKEAVRIVKNG 196
K A++IVK+G
Sbjct: 245 -------AKTALKIVKSG 255
>sp|Q7M8D5|RL4_WOLSU 50S ribosomal protein L4 OS=Wolinella succinogenes (strain ATCC
29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
GN=rplD PE=3 SV=1
Length = 204
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 194 KNGERTLPMRHKEIHIINCHPSVKYALDFGLNLVSEKIRKRIKVS 238
KNGE LP R KEIH N + VK L L S K +KR +VS
Sbjct: 13 KNGEVALPERFKEIHSHNLYLYVKSYLA-SLRANSAKAKKRGEVS 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,505,018
Number of Sequences: 539616
Number of extensions: 4256693
Number of successful extensions: 10602
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 10526
Number of HSP's gapped (non-prelim): 68
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)