Query psy8728
Match_columns 379
No_of_seqs 380 out of 2543
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 17:42:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wjz_A 1700030A21RIK protein; 99.8 2.4E-19 8.3E-24 145.3 7.5 75 304-378 12-89 (94)
2 2ej7_A HCG3 gene; HCG3 protein 99.8 7.5E-19 2.6E-23 139.0 9.2 73 304-378 5-77 (82)
3 2ctp_A DNAJ homolog subfamily 99.8 7.4E-19 2.5E-23 137.9 8.7 69 305-377 4-72 (78)
4 2dn9_A DNAJ homolog subfamily 99.8 6.1E-19 2.1E-23 138.6 7.9 70 305-377 4-73 (79)
5 1hdj_A Human HSP40, HDJ-1; mol 99.8 7E-19 2.4E-23 137.7 8.0 66 308-377 3-68 (77)
6 2yua_A Williams-beuren syndrom 99.8 9E-19 3.1E-23 143.8 8.4 70 304-376 13-82 (99)
7 2ctr_A DNAJ homolog subfamily 99.8 1E-18 3.6E-23 140.4 8.1 68 305-376 4-71 (88)
8 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.6E-18 5.4E-23 139.3 8.6 70 304-377 13-82 (88)
9 2ctq_A DNAJ homolog subfamily 99.7 1.6E-18 5.4E-23 145.5 7.8 71 304-377 16-86 (112)
10 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1.6E-18 5.5E-23 144.5 7.3 72 305-376 12-84 (109)
11 2och_A Hypothetical protein DN 99.7 2.9E-18 1E-22 133.0 8.2 66 305-376 5-70 (73)
12 2dmx_A DNAJ homolog subfamily 99.7 2.2E-18 7.7E-23 139.4 7.8 71 305-377 6-76 (92)
13 2ctw_A DNAJ homolog subfamily 99.7 4.1E-18 1.4E-22 142.3 9.2 70 304-376 13-82 (109)
14 2lgw_A DNAJ homolog subfamily 99.7 4.7E-18 1.6E-22 139.8 7.8 67 308-376 2-68 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.7 7.2E-18 2.5E-22 136.6 8.0 65 306-376 6-70 (92)
16 2l6l_A DNAJ homolog subfamily 99.7 8.6E-18 2.9E-22 148.3 8.7 74 304-377 6-82 (155)
17 1bq0_A DNAJ, HSP40; chaperone, 99.7 2E-18 6.8E-23 142.6 4.0 68 307-377 2-69 (103)
18 2ys8_A RAB-related GTP-binding 99.7 1.3E-17 4.4E-22 134.8 5.0 62 307-372 26-87 (90)
19 3apq_A DNAJ homolog subfamily 99.7 8.8E-17 3E-21 146.3 7.2 67 308-377 2-68 (210)
20 3hho_A CO-chaperone protein HS 99.7 1.3E-16 4.3E-21 143.9 7.6 71 306-376 2-76 (174)
21 1iur_A KIAA0730 protein; DNAJ 99.7 2.4E-17 8.2E-22 132.9 2.5 69 304-374 12-80 (88)
22 1fpo_A HSC20, chaperone protei 99.6 1.7E-16 6E-21 142.6 7.0 69 309-377 2-74 (171)
23 2qwo_B Putative tyrosine-prote 99.6 1.5E-16 5E-21 129.4 5.1 84 281-366 8-91 (92)
24 3bvo_A CO-chaperone protein HS 99.6 3.2E-16 1.1E-20 144.9 7.9 71 306-376 41-115 (207)
25 1faf_A Large T antigen; J doma 99.6 1.2E-16 4.3E-21 126.1 3.8 63 305-374 8-72 (79)
26 1n4c_A Auxilin; four helix bun 99.6 2.6E-16 8.7E-21 142.7 4.8 91 281-373 92-182 (182)
27 3lz8_A Putative chaperone DNAJ 99.6 6E-17 2E-21 159.5 0.0 71 301-375 21-91 (329)
28 1gh6_A Large T antigen; tumor 99.6 6.3E-17 2.1E-21 136.5 -0.6 62 307-375 7-70 (114)
29 3ag7_A Putative uncharacterize 99.6 6.3E-16 2.2E-20 128.7 5.4 62 306-368 39-104 (106)
30 2pf4_E Small T antigen; PP2A, 99.6 1.1E-16 3.7E-21 144.2 -0.4 66 305-377 8-75 (174)
31 2guz_A Mitochondrial import in 99.6 5.3E-16 1.8E-20 120.0 2.9 59 305-370 11-70 (71)
32 3uo3_A J-type CO-chaperone JAC 99.5 6.6E-15 2.2E-19 133.5 3.9 68 304-377 7-81 (181)
33 3apo_A DNAJ homolog subfamily 99.4 3.5E-14 1.2E-18 152.5 1.3 70 304-376 17-86 (780)
34 2y4t_A DNAJ homolog subfamily 99.1 4.6E-11 1.6E-15 115.9 5.8 69 307-375 381-449 (450)
35 2guz_B Mitochondrial import in 99.0 3.2E-10 1.1E-14 86.2 4.5 55 306-367 2-59 (65)
36 2pzi_A Probable serine/threoni 80.4 0.86 2.9E-05 47.7 3.1 48 305-363 626-675 (681)
37 4dve_A Biotin transporter BIOY 60.9 13 0.00043 33.5 5.7 58 29-88 64-121 (198)
No 1
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=2.4e-19 Score=145.31 Aligned_cols=75 Identities=29% Similarity=0.458 Sum_probs=68.2
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCC---ChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhcc
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAK---SDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQRS 378 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~---~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~~ 378 (379)
.....|+|+||||+++++.+|||++||++++++|||+++ +++.++.++++|++|++||++|+||.+|+.||..+.
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 356789999999999999999999999999999999976 345678899999999999999999999999998653
No 2
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=7.5e-19 Score=139.04 Aligned_cols=73 Identities=27% Similarity=0.474 Sum_probs=66.0
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhcc
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQRS 378 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~~ 378 (379)
..+..|+|+||||+++++.+|||++||++++++|||+++++ ++.++++|++|++||++|+||.+|+.||+...
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN--KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT--HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 35568999999999999999999999999999999998754 36789999999999999999999999998543
No 3
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=7.4e-19 Score=137.92 Aligned_cols=69 Identities=25% Similarity=0.450 Sum_probs=64.1
Q ss_pred CCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 305 FGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
....|+|+||||+++++.+|||++||++++++|||+++++ .++++|++|++||++|+||.+|+.||+..
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 72 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP----GATEAFKAIGTAYAVLSNPEKRKQYDQFG 72 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH----HHHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----cHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 4568999999999999999999999999999999998765 68899999999999999999999999754
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=6.1e-19 Score=138.61 Aligned_cols=70 Identities=30% Similarity=0.510 Sum_probs=64.2
Q ss_pred CCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 305 FGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
....|+|+||||+++++.+|||++||++++++|||++++. +.++++|++|++||++|+||.+|+.||...
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 73 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD---PKAKEKFSQLAEAYEVLSDEVKRKQYDAYG 73 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC---TTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC---HHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence 4568999999999999999999999999999999998854 368899999999999999999999999754
No 5
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.77 E-value=7e-19 Score=137.73 Aligned_cols=66 Identities=33% Similarity=0.541 Sum_probs=62.1
Q ss_pred cchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 308 QNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 308 ~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
.|+|+||||++++|.+|||++||++++++|||+++++ .++++|++|++||++|+||.+|+.||+..
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~----~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 68 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP----GAEEKFKEIAEAYDVLSDPRKREIFDRYG 68 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT----THHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----cHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 6899999999999999999999999999999998865 68899999999999999999999999743
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=9e-19 Score=143.82 Aligned_cols=70 Identities=24% Similarity=0.458 Sum_probs=64.6
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.....|+|+||||+++++.+|||++||++++++|||++++. +.++++|++|++||++|+||.+|+.||+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS---AEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC---SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC---HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 35678999999999999999999999999999999999754 36889999999999999999999999974
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1e-18 Score=140.40 Aligned_cols=68 Identities=32% Similarity=0.540 Sum_probs=63.6
Q ss_pred CCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 305 FGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
....|+|+||||+++++.+|||++||++++++|||+++++ .++++|++|++||++|+||.+|+.||+.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~ 71 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP----DAEAKFREIAEAYETLSDANRRKEYDTL 71 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH----HHHHHHHHHHHHHHHHHSSHHHHHHHHT
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 4568999999999999999999999999999999998854 7899999999999999999999999974
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=1.6e-18 Score=139.34 Aligned_cols=70 Identities=30% Similarity=0.534 Sum_probs=64.6
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
.....|+|+||||+++++.+|||++||++++++|||+++++ .++++|++|++||++|+||.+|+.||+..
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 82 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP----GAEDRFIQISKAYEILSNEEKRTNYDHYG 82 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST----THHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh----hHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 34568999999999999999999999999999999998865 68899999999999999999999999753
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.6e-18 Score=145.50 Aligned_cols=71 Identities=21% Similarity=0.375 Sum_probs=64.8
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
.....|+|+||||+++++.+|||++||++++++|||+++++ +.++++|++|++||++|+||.+|+.||+.+
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 86 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN---PKAVETFQKLQKAKEILTNEESRARYDHWR 86 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC---STHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---HHHHHHHHHHHHHHHHHCCHHHHHHHHHhh
Confidence 35668999999999999999999999999999999999854 368999999999999999999999999743
No 10
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.74 E-value=1.6e-18 Score=144.50 Aligned_cols=72 Identities=31% Similarity=0.441 Sum_probs=67.6
Q ss_pred CCccchhhhcccCCCC-CHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 305 FGEQNAFKVLGLAHTA-RQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~a-s~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.+..|+|+||||++++ |.+|||++||++++++|||+++++..++.++++|++|++||++|+||.+|+.||+.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~ 84 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYY 84 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 5578999999999999 99999999999999999999987667789999999999999999999999999974
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.74 E-value=2.9e-18 Score=132.96 Aligned_cols=66 Identities=30% Similarity=0.540 Sum_probs=60.5
Q ss_pred CCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 305 FGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.+..|+|+||||++++|.+|||++||++++++|||++++. +++|++|++||++|+||.+|+.||+-
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~------~~~f~~i~~Ay~~L~d~~~R~~YD~~ 70 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG------AEQFKQISQAYEVLSDEKKRQIYDQG 70 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC------HHHHHHHHHHHHHHTSHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH------HHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 3458999999999999999999999999999999998754 47899999999999999999999974
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.2e-18 Score=139.36 Aligned_cols=71 Identities=30% Similarity=0.522 Sum_probs=64.9
Q ss_pred CCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 305 FGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
....|+|+||||+++++.+|||++||++++++|||+++++ .+.++++|++|++||++|+||.+|+.||+..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 76 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN--KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAG 76 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC--SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc--HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 4568999999999999999999999999999999998743 3588999999999999999999999999854
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=4.1e-18 Score=142.33 Aligned_cols=70 Identities=29% Similarity=0.513 Sum_probs=64.7
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.....|+|+||||+++++.+|||++||++++++|||++++. +.++++|++|++||++|+||.+|+.||..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 82 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN---PEAADKFKEINNAHAILTDATKRNIYDKY 82 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC---HHHHHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---HHHHHHHHHHHHHHHHHcCHHHHHHHHHh
Confidence 45678999999999999999999999999999999998854 36889999999999999999999999974
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=4.7e-18 Score=139.84 Aligned_cols=67 Identities=28% Similarity=0.540 Sum_probs=62.3
Q ss_pred cchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 308 QNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 308 ~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.|+|+||||++++|.+|||++||++++++|||+++++ ++.++++|++|++||++|+||.+|+.||+.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~ 68 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDN--KEFAEKKFKEVAEAYEVLSDKHKREIYDRY 68 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC--CHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc--HHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 5899999999999999999999999999999998753 357899999999999999999999999974
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.72 E-value=7.2e-18 Score=136.63 Aligned_cols=65 Identities=31% Similarity=0.574 Sum_probs=60.4
Q ss_pred CccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 306 GEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 306 ~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.+.|+|+||||++++|.+|||++||++++++|||+++++ .++|++|++||++|+||.+|+.||+.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~f~~i~~Ay~~L~d~~~R~~YD~~ 70 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD------TEKFKEISEAFEILNDPQKREIYDQY 70 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC------HHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh------HHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 568999999999999999999999999999999998754 36899999999999999999999974
No 16
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=8.6e-18 Score=148.34 Aligned_cols=74 Identities=31% Similarity=0.505 Sum_probs=67.4
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSD---EEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~---~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
.....|+|+||||+++++.++||++||++++++||||++++ ++++.++++|++|++||++|+||.+|+.||...
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45678999999999999999999999999999999998743 567789999999999999999999999999743
No 17
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.72 E-value=2e-18 Score=142.65 Aligned_cols=68 Identities=32% Similarity=0.637 Sum_probs=62.7
Q ss_pred ccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 307 EQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 307 ~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
..|+|+||||++++|.+|||++||++++++|||+++++ +.++++|++|++||++|+||.+|+.||+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 69 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD---KEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 69 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT---CTHHHHHHHHTTTTTSTTCSHHHHHTTTST
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 46999999999999999999999999999999998853 368899999999999999999999999744
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-17 Score=134.76 Aligned_cols=62 Identities=26% Similarity=0.410 Sum_probs=57.6
Q ss_pred ccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHH
Q psy8728 307 EQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRR 372 (379)
Q Consensus 307 ~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~ 372 (379)
..|+|+||||+++++.+|||++||++++++|||+++++ .++++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~----~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP----GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT----THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc----cHHHHHHHHHHHHHHHCCcccccC
Confidence 48999999999999999999999999999999999865 678899999999999999998754
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.66 E-value=8.8e-17 Score=146.31 Aligned_cols=67 Identities=30% Similarity=0.563 Sum_probs=62.1
Q ss_pred cchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 308 QNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 308 ~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
+|+|+||||+++||.+|||+|||++++++|||++++. ++++++|++|++||++|+||.+|+.||+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~---~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~ 68 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN---PNAHGDFLKINRAYEVLKDEDLRKKYDKYG 68 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC---TTHHHHHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC---hHHHHHHHHHHHHHHHhCCHHHHHHHHHhc
Confidence 5899999999999999999999999999999998754 368899999999999999999999999743
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.65 E-value=1.3e-16 Score=143.89 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=63.3
Q ss_pred CccchhhhcccCCCCC--HHHHHHHHHHHHHHhCCCCCCC--hhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 306 GEQNAFKVLGLAHTAR--QSEINSACRHLSVKYHPDKAKS--DEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 306 ~~~d~Y~vLGv~~~as--~~eIkkaYRkla~~~HPDk~~~--~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
...|||+||||+++++ .++||++||++++++|||++++ +.+++.+.++|++|++||++|+||.+|+.||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3579999999999998 9999999999999999999874 345566899999999999999999999999974
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.65 E-value=2.4e-17 Score=132.95 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=61.0
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHh
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQK 374 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd 374 (379)
+....++|+||||+++||.+|||++||++++++|||+++++ .+.++++|++|++||++|+|+..|..+.
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~--~~~a~~~F~~I~~AYevL~~~~~r~~~~ 80 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN--HDIANEVFKHLQNEINRLEKQAFLDQNA 80 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC--HHHHHHHHHHHHHHHHHHHHHTTCSSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 46678999999999999999999999999999999998754 2578999999999999999988774443
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.64 E-value=1.7e-16 Score=142.61 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=63.5
Q ss_pred chhhhcccCCCC--CHHHHHHHHHHHHHHhCCCCCCC--hhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 309 NAFKVLGLAHTA--RQSEINSACRHLSVKYHPDKAKS--DEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 309 d~Y~vLGv~~~a--s~~eIkkaYRkla~~~HPDk~~~--~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
|||++|||++++ |.++||++||++++++|||++++ +.+++.+.++|++|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999874 3466788999999999999999999999999753
No 23
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=1.5e-16 Score=129.35 Aligned_cols=84 Identities=18% Similarity=0.210 Sum_probs=66.8
Q ss_pred HHHHHHHhcChHHHHHHHHhcCCCCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHH
Q psy8728 281 DTWEFAQQHGWYETWSQIVELGDPFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQA 360 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eA 360 (379)
..|..-+..........+...+-+. .++|++|||+++||.+|||+|||++++++||||+++++.++.|+++|++|++|
T Consensus 8 ~~W~~gk~~~ir~lL~~l~~~L~~~--~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eA 85 (92)
T 2qwo_B 8 LEWIEGKERNIRALLSTMHTVLWAG--ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDA 85 (92)
T ss_dssp HHHHHHHTTCHHHHHHHGGGTSCTT--CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHccChhHHHHHHHHHHHHhccc--ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHH
Confidence 3465555566665555555444332 58899999999999999999999999999999998654446799999999999
Q ss_pred HHHcCC
Q psy8728 361 CELLSN 366 (379)
Q Consensus 361 YevLsd 366 (379)
|++|.+
T Consensus 86 yevL~~ 91 (92)
T 2qwo_B 86 WSEFEN 91 (92)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.63 E-value=3.2e-16 Score=144.92 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=64.3
Q ss_pred CccchhhhcccCCC--CCHHHHHHHHHHHHHHhCCCCCCC--hhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 306 GEQNAFKVLGLAHT--ARQSEINSACRHLSVKYHPDKAKS--DEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 306 ~~~d~Y~vLGv~~~--as~~eIkkaYRkla~~~HPDk~~~--~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
...|||++|||+++ ++.++||++||+|++++|||++++ +.+++.++++|++|++||++|+||.+|+.||..
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 46899999999986 689999999999999999999874 346678899999999999999999999999964
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.62 E-value=1.2e-16 Score=126.10 Aligned_cols=63 Identities=17% Similarity=0.259 Sum_probs=56.9
Q ss_pred CCccchhhhcccCCC--CCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHh
Q psy8728 305 FGEQNAFKVLGLAHT--ARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQK 374 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~--as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd 374 (379)
....++|+||||+++ +|.+|||++||++++++|||+++++ ++|++|++||++|+|+.+|.+++
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~-------~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH-------ALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCH-------HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH-------HHHHHHHHHHHHHhhHHHHHHHh
Confidence 344789999999999 9999999999999999999997654 78999999999999999998754
No 26
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.61 E-value=2.6e-16 Score=142.67 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=71.2
Q ss_pred HHHHHHHhcChHHHHHHHHhcCCCCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHH
Q psy8728 281 DTWEFAQQHGWYETWSQIVELGDPFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQA 360 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eA 360 (379)
..|...+..........+...+ ....|+|++|||++++|.+|||++||++++++||||++++..++.++++|++|++|
T Consensus 92 ~~W~~gk~~niRaLLssl~~vl--~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eA 169 (182)
T 1n4c_A 92 LEWIEGKERNIRALLSTMHTVL--WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDA 169 (182)
T ss_dssp HHHHHHHTTCHHHHHHHGGGGS--CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHh--cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHH
Confidence 4465544445444444333222 22379999999999999999999999999999999998654445699999999999
Q ss_pred HHHcCChhHHHHH
Q psy8728 361 CELLSNKHAKRRQ 373 (379)
Q Consensus 361 YevLsdp~kR~~y 373 (379)
|++|+||.+|+.|
T Consensus 170 YevLsD~~kR~~Y 182 (182)
T 1n4c_A 170 WSEFENQGQKPLY 182 (182)
T ss_dssp HHHHHHHHSSCCC
T ss_pred HHHHCCHHhhhhC
Confidence 9999999999765
No 27
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.60 E-value=6e-17 Score=159.47 Aligned_cols=71 Identities=25% Similarity=0.498 Sum_probs=0.0
Q ss_pred cCCCCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhh
Q psy8728 301 LGDPFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKN 375 (379)
Q Consensus 301 ~~~~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~ 375 (379)
....+..+|||+||||+++||.+|||+|||+|++++|||+++++ .|+++|++|++||++|+||.+|+.||+
T Consensus 21 ~~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~----~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 91 (329)
T 3lz8_A 21 QSNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN----DAEAKFKDLAEAWEVLKDEQRRAEYDQ 91 (329)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred ccccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh----HHHHHHHHHHHHHHHhhhhhhhcccch
Confidence 33445668999999999999999999999999999999998754 788999999999999999999999997
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.59 E-value=6.3e-17 Score=136.49 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=57.7
Q ss_pred ccchhhhcccCCCCCH--HHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhh
Q psy8728 307 EQNAFKVLGLAHTARQ--SEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKN 375 (379)
Q Consensus 307 ~~d~Y~vLGv~~~as~--~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~ 375 (379)
..++|+||||+++++. ++||+|||++++++||||++++ ++|++|++||++|+||.+|+.||+
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~-------e~f~~I~~AYevL~d~~~R~~~~~ 70 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-------EKMKKMNTLYKKMEDGVKYAHQPD 70 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT-------TTTHHHHHHHHHHHHHHHSCCSSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccH-------HHHHHHHHHHHHHCCHHHHHHhhh
Confidence 4689999999999998 9999999999999999998753 789999999999999999999884
No 29
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=6.3e-16 Score=128.74 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=56.0
Q ss_pred CccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCC----ChhHhHHHHHHHHHHHHHHHHcCChh
Q psy8728 306 GEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAK----SDEEKQHNQSKFYEIQQACELLSNKH 368 (379)
Q Consensus 306 ~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~----~~~~~~~a~e~f~~I~eAYevLsdp~ 368 (379)
...|+|+|||++. ||.+|||+|||++++++||||++ ++++++.|+++|++|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 99999999999999999999975 35567789999999999999999985
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.58 E-value=1.1e-16 Score=144.24 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=57.5
Q ss_pred CCccchhhhcccCCCCC--HHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhhc
Q psy8728 305 FGEQNAFKVLGLAHTAR--QSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQR 377 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as--~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~~ 377 (379)
....|+|+||||+++|+ .+|||+|||++++++|||+++++ ++|++|++||++|+||.+|+.||+-.
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-------e~F~~I~~AYevLsdp~kR~~YD~~G 75 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-------EKMKKMNTLYKKMEDGVKYAHQPDFG 75 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-------TTTTHHHHHHHHHHHHHHHHTSCGGG
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-------HHHHHHHHHHHHhCCHHHHHHHhccC
Confidence 34579999999999998 69999999999999999998764 78999999999999999999999743
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.57 E-value=5.3e-16 Score=119.97 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=53.1
Q ss_pred CCccchhhhcccCC-CCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHH
Q psy8728 305 FGEQNAFKVLGLAH-TARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAK 370 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~-~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR 370 (379)
+...++|+||||++ ++|.+|||++||++++++|||+++++ ++|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~-------~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP-------FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH-------HHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH-------HHHHHHHHHHHHHhhhhhc
Confidence 45679999999999 79999999999999999999997554 6899999999999998655
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.50 E-value=6.6e-15 Score=133.52 Aligned_cols=68 Identities=19% Similarity=0.223 Sum_probs=60.5
Q ss_pred CCCccchhhhc------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 304 PFGEQNAFKVL------GLAH-TARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 304 ~~~~~d~Y~vL------Gv~~-~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
.....|||++| |+++ ++|.++||++||++++++|||++++ ++++|++|++||++|+||.+|+.||..
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~------a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ------GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS------CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc------HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 34568999999 4665 8999999999999999999999875 468899999999999999999999975
Q ss_pred c
Q psy8728 377 R 377 (379)
Q Consensus 377 ~ 377 (379)
.
T Consensus 81 l 81 (181)
T 3uo3_A 81 L 81 (181)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.40 E-value=3.5e-14 Score=152.46 Aligned_cols=70 Identities=29% Similarity=0.527 Sum_probs=40.1
Q ss_pred CCCccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhhh
Q psy8728 304 PFGEQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKNQ 376 (379)
Q Consensus 304 ~~~~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~~ 376 (379)
...+.|+|++|||+++||.+|||+|||++++++|||++++. +.++++|++|++||++|+||.+|+.||+.
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~---~~~~~~f~~i~~ay~~L~~~~~r~~yd~~ 86 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN---PNAHGDFLKINRAYEVLKDEDLRKKYDKY 86 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC--------------------------CTHHHHHHSHHHHHHHTTC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC---hHHHHHHHHHHHHHHHHcChHHHHHHHhh
Confidence 45668999999999999999999999999999999998644 46889999999999999999999999974
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=4.6e-11 Score=115.88 Aligned_cols=69 Identities=32% Similarity=0.633 Sum_probs=60.9
Q ss_pred ccchhhhcccCCCCCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCChhHHHHHhh
Q psy8728 307 EQNAFKVLGLAHTARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNKHAKRRQKN 375 (379)
Q Consensus 307 ~~d~Y~vLGv~~~as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp~kR~~yd~ 375 (379)
..++|++||++++++.++++++|+++++++|||+.+++++++.++++|++|++||++|+||++|++||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 358999999999999999999999999999999998887788999999999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=3.2e-10 Score=86.21 Aligned_cols=55 Identities=18% Similarity=0.120 Sum_probs=49.7
Q ss_pred CccchhhhcccCCC---CCHHHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHHcCCh
Q psy8728 306 GEQNAFKVLGLAHT---ARQSEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACELLSNK 367 (379)
Q Consensus 306 ~~~d~Y~vLGv~~~---as~~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYevLsdp 367 (379)
...++|+||||+++ ++.++|+++||+|...+|||+++++ ....+|++|+++|...
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~-------yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF-------YLQSKVYRAAERLKWE 59 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH-------HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHHHHH
Confidence 34689999999999 9999999999999999999998776 7889999999999754
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=80.45 E-value=0.86 Score=47.72 Aligned_cols=48 Identities=13% Similarity=0.220 Sum_probs=36.8
Q ss_pred CCccchhhhcccCCCCCH--HHHHHHHHHHHHHhCCCCCCChhHhHHHHHHHHHHHHHHHH
Q psy8728 305 FGEQNAFKVLGLAHTARQ--SEINSACRHLSVKYHPDKAKSDEEKQHNQSKFYEIQQACEL 363 (379)
Q Consensus 305 ~~~~d~Y~vLGv~~~as~--~eIkkaYRkla~~~HPDk~~~~~~~~~a~e~f~~I~eAYev 363 (379)
.+..|+|++||++.+... .+|+++||++++..++| ++++..+..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----------HHHHHHHHHhccc
Confidence 445669999999777655 77999999999966554 2577777777765
No 37
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=60.93 E-value=13 Score=33.54 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=40.4
Q ss_pred CchHHHHHHHHHHhhhcccceeecCCchhHHHHHHhhhhhhhHHHHHHHHHhhHHHHHHh
Q psy8728 29 EKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADAN 88 (379)
Q Consensus 29 ~k~~~~a~~l~~~~G~~G~HrfYlg~~~~g~~~~~t~gg~~~i~~~~D~~~i~~~v~~~n 88 (379)
.|.-..+.++++++|.+|+==|==|+-+.+.+.==|+ | +.+|+++-.+.+.-..++.+
T Consensus 64 ~r~G~lsv~lYlllG~~GlPVFagg~gG~~~l~gPTg-G-YLiGF~~aA~v~G~l~~~~~ 121 (198)
T 4dve_A 64 PKYGTISVGAFLALALIGLPVLTGGNGGAASFLGPSG-G-YRIAWLFTPFLIGFFLKKLK 121 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCBTTTBCCSGGGGSTTH-H-HHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHcCccccCCCCchhHHhcchh-H-HHHHHHHHHHHHHHHHHHcc
Confidence 4666778899999999999988766544443333344 6 57888888887776665543
Done!