Query psy8729
Match_columns 190
No_of_seqs 124 out of 1564
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 17:44:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i5g_A Tryparedoxin II; electr 99.9 4.4E-25 1.5E-29 158.2 13.8 136 23-164 6-144 (144)
2 3s9f_A Tryparedoxin; thioredox 99.9 2.2E-25 7.6E-30 164.0 12.0 136 23-165 27-165 (165)
3 1o8x_A Tryparedoxin, TRYX, TXN 99.9 9.8E-25 3.4E-29 156.8 13.4 136 23-165 7-145 (146)
4 1o73_A Tryparedoxin; electron 99.9 3.3E-24 1.1E-28 153.3 13.4 135 23-164 7-144 (144)
5 3eur_A Uncharacterized protein 99.9 2.9E-23 9.8E-28 148.4 8.0 120 19-146 6-130 (142)
6 3ewl_A Uncharacterized conserv 99.9 2.2E-22 7.7E-27 143.4 11.3 117 20-144 3-124 (142)
7 4fo5_A Thioredoxin-like protei 99.9 1.3E-22 4.4E-27 145.1 8.6 119 19-145 8-129 (143)
8 2lrt_A Uncharacterized protein 99.9 1.9E-21 6.4E-26 140.9 13.2 117 18-144 9-128 (152)
9 3hcz_A Possible thiol-disulfid 99.9 8.1E-22 2.8E-26 140.9 10.5 117 19-140 6-124 (148)
10 2lrn_A Thiol:disulfide interch 99.9 2.1E-21 7.2E-26 140.2 12.0 118 20-145 5-125 (152)
11 3fw2_A Thiol-disulfide oxidore 99.9 2.1E-21 7.2E-26 139.9 11.6 116 19-140 6-129 (150)
12 3fkf_A Thiol-disulfide oxidore 99.9 2.3E-21 8E-26 138.5 10.2 116 19-140 6-127 (148)
13 3gl3_A Putative thiol:disulfid 99.9 9.3E-21 3.2E-25 136.3 13.2 115 19-140 4-118 (152)
14 2f9s_A Thiol-disulfide oxidore 99.9 5.9E-21 2E-25 137.5 11.3 114 21-140 3-116 (151)
15 3eyt_A Uncharacterized protein 99.8 3.6E-21 1.2E-25 139.5 9.9 114 21-140 3-130 (158)
16 3drn_A Peroxiredoxin, bacterio 99.8 8.5E-21 2.9E-25 138.6 11.0 117 20-143 4-126 (161)
17 2lja_A Putative thiol-disulfid 99.8 6.4E-21 2.2E-25 137.2 10.1 117 21-144 6-123 (152)
18 3lor_A Thiol-disulfide isomera 99.8 5.3E-21 1.8E-25 138.8 9.7 115 21-141 6-134 (160)
19 2lus_A Thioredoxion; CR-Trp16, 99.7 9.3E-23 3.2E-27 145.3 0.0 124 23-151 3-130 (143)
20 4evm_A Thioredoxin family prot 99.8 1.6E-20 5.5E-25 131.9 11.3 111 24-140 2-117 (138)
21 1zzo_A RV1677; thioredoxin fol 99.8 1.1E-20 3.9E-25 132.8 10.4 113 21-140 2-114 (136)
22 3erw_A Sporulation thiol-disul 99.8 1.6E-20 5.3E-25 133.6 10.9 115 19-140 10-127 (145)
23 3kcm_A Thioredoxin family prot 99.8 3E-20 1E-24 133.9 12.0 115 20-140 4-119 (154)
24 3u5r_E Uncharacterized protein 99.8 1.2E-20 4E-25 144.7 10.0 121 17-145 31-159 (218)
25 3or5_A Thiol:disulfide interch 99.8 7.5E-20 2.6E-24 133.2 13.4 116 18-140 8-129 (165)
26 3ha9_A Uncharacterized thiored 99.8 1.1E-20 3.6E-25 138.1 8.8 113 22-144 15-145 (165)
27 3kh7_A Thiol:disulfide interch 99.8 2.5E-20 8.6E-25 138.2 10.9 114 19-141 31-146 (176)
28 1lu4_A Soluble secreted antige 99.8 2.2E-20 7.5E-25 131.6 9.6 111 23-141 3-113 (136)
29 1jfu_A Thiol:disulfide interch 99.8 6E-20 2.1E-24 136.7 12.0 115 21-140 37-156 (186)
30 3lwa_A Secreted thiol-disulfid 99.8 5.4E-20 1.8E-24 136.7 11.5 117 21-141 34-160 (183)
31 2cvb_A Probable thiol-disulfid 99.8 4.4E-20 1.5E-24 137.8 10.5 120 17-145 6-132 (188)
32 3raz_A Thioredoxin-related pro 99.8 1.1E-19 3.8E-24 130.9 12.0 114 23-144 4-122 (151)
33 3hdc_A Thioredoxin family prot 99.8 6.1E-20 2.1E-24 133.4 10.4 118 18-144 15-132 (158)
34 2l5o_A Putative thioredoxin; s 99.8 1E-19 3.5E-24 131.0 11.1 114 21-140 5-119 (153)
35 3gkn_A Bacterioferritin comigr 99.8 5.4E-20 1.8E-24 134.2 9.7 119 19-144 8-141 (163)
36 2b5x_A YKUV protein, TRXY; thi 99.8 8.4E-20 2.9E-24 130.2 9.2 112 22-140 5-123 (148)
37 4g2e_A Peroxiredoxin; redox pr 99.8 8.7E-21 3E-25 138.3 4.0 116 20-142 6-133 (157)
38 2b1k_A Thiol:disulfide interch 99.8 1.1E-19 3.6E-24 133.2 9.6 113 20-140 24-138 (168)
39 3ia1_A THIO-disulfide isomeras 99.8 1.6E-19 5.6E-24 130.1 10.2 112 19-140 6-122 (154)
40 2h30_A Thioredoxin, peptide me 99.8 9.7E-20 3.3E-24 132.5 8.1 108 28-140 22-134 (164)
41 2ywi_A Hypothetical conserved 99.8 1.9E-19 6.4E-24 135.0 9.3 116 19-140 19-143 (196)
42 1xzo_A BSSCO, hypothetical pro 99.8 3.6E-19 1.2E-23 130.8 10.7 118 20-140 9-148 (174)
43 2rli_A SCO2 protein homolog, m 99.8 1.3E-18 4.4E-23 127.5 13.6 114 25-142 7-144 (171)
44 1xvw_A Hypothetical protein RV 99.8 2.4E-19 8.3E-24 130.2 9.4 117 18-141 9-135 (160)
45 2ggt_A SCO1 protein homolog, m 99.8 9.5E-19 3.3E-23 127.3 12.4 114 24-141 3-140 (164)
46 2ls5_A Uncharacterized protein 99.7 6.6E-21 2.3E-25 138.4 0.0 115 21-140 10-127 (159)
47 3dwv_A Glutathione peroxidase- 99.8 2.2E-19 7.7E-24 134.3 7.6 115 21-141 23-162 (187)
48 1psq_A Probable thiol peroxida 99.8 7.8E-19 2.7E-23 128.4 10.0 118 19-144 17-142 (163)
49 4gqc_A Thiol peroxidase, perox 99.8 2.6E-20 8.8E-25 136.9 1.9 120 18-143 5-136 (164)
50 1tp9_A Peroxiredoxin, PRX D (t 99.8 1E-18 3.5E-23 127.8 10.5 114 21-141 7-140 (162)
51 2c0d_A Thioredoxin peroxidase 99.8 7.7E-19 2.6E-23 135.0 10.2 119 20-143 27-161 (221)
52 1we0_A Alkyl hydroperoxide red 99.8 5.6E-19 1.9E-23 131.9 9.2 115 21-142 4-133 (187)
53 2p31_A CL683, glutathione pero 99.8 3.2E-19 1.1E-23 132.7 7.6 117 19-141 24-160 (181)
54 1q98_A Thiol peroxidase, TPX; 99.8 5E-19 1.7E-23 129.8 8.5 118 18-143 17-145 (165)
55 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 9.6E-19 3.3E-23 128.9 10.1 116 20-141 5-136 (167)
56 2hyx_A Protein DIPZ; thioredox 99.8 1.2E-18 4.2E-23 142.3 11.6 117 20-142 53-179 (352)
57 1kng_A Thiol:disulfide interch 99.8 4.5E-19 1.6E-23 127.8 8.1 113 20-140 10-130 (156)
58 3cmi_A Peroxiredoxin HYR1; thi 99.8 5.4E-19 1.8E-23 130.1 8.6 115 21-142 9-148 (171)
59 3ztl_A Thioredoxin peroxidase; 99.8 1.1E-18 3.7E-23 134.1 10.6 117 18-140 40-172 (222)
60 2h01_A 2-Cys peroxiredoxin; th 99.8 1E-18 3.5E-23 131.1 10.2 119 21-144 3-137 (192)
61 3ixr_A Bacterioferritin comigr 99.8 8.9E-19 3.1E-23 130.2 9.8 113 24-143 31-156 (179)
62 3kij_A Probable glutathione pe 99.8 3.1E-18 1.1E-22 127.2 12.6 122 14-141 8-149 (180)
63 2jsy_A Probable thiol peroxida 99.8 4.6E-19 1.6E-23 129.8 7.9 119 18-144 18-144 (167)
64 2f8a_A Glutathione peroxidase 99.8 7.4E-18 2.5E-22 128.3 14.8 77 21-100 23-107 (208)
65 2pn8_A Peroxiredoxin-4; thiore 99.8 1.3E-18 4.4E-23 132.8 10.6 118 21-144 22-155 (211)
66 2p5q_A Glutathione peroxidase 99.8 1.6E-18 5.6E-23 126.7 10.7 116 20-141 8-147 (170)
67 1qmv_A Human thioredoxin perox 99.8 1.5E-18 5.2E-23 130.7 10.7 120 18-143 5-140 (197)
68 1zof_A Alkyl hydroperoxide-red 99.8 1.1E-18 3.8E-23 131.5 9.7 114 21-140 4-135 (198)
69 2i81_A 2-Cys peroxiredoxin; st 99.8 1.3E-18 4.5E-23 132.9 10.2 119 20-143 23-157 (213)
70 2v1m_A Glutathione peroxidase; 99.8 1.7E-18 5.8E-23 126.5 10.0 117 20-142 7-147 (169)
71 3zrd_A Thiol peroxidase; oxido 99.8 1.4E-18 4.6E-23 131.6 9.7 116 18-141 52-178 (200)
72 2bmx_A Alkyl hydroperoxidase C 99.8 1.2E-18 4E-23 131.1 9.1 115 21-142 7-146 (195)
73 2obi_A PHGPX, GPX-4, phospholi 99.8 3E-18 1E-22 127.5 11.1 116 21-142 24-164 (183)
74 2gs3_A PHGPX, GPX-4, phospholi 99.8 1.3E-18 4.6E-23 129.7 9.2 117 21-143 26-167 (185)
75 3mng_A Peroxiredoxin-5, mitoch 99.8 2E-18 6.7E-23 128.0 10.0 118 20-143 17-152 (173)
76 2b7k_A SCO1 protein; metalloch 99.8 4.7E-18 1.6E-22 128.4 12.3 116 24-142 21-159 (200)
77 1n8j_A AHPC, alkyl hydroperoxi 99.8 1.5E-18 5.1E-23 129.8 9.4 117 21-144 4-134 (186)
78 3p7x_A Probable thiol peroxida 99.8 6.7E-19 2.3E-23 129.2 6.9 117 17-142 19-143 (166)
79 3qpm_A Peroxiredoxin; oxidored 99.8 3.7E-18 1.3E-22 132.8 11.4 119 19-143 49-183 (240)
80 3me7_A Putative uncharacterize 99.8 4E-18 1.4E-22 125.7 10.9 118 21-141 4-140 (170)
81 1zye_A Thioredoxin-dependent p 99.8 4.9E-18 1.7E-22 130.3 11.7 119 19-143 28-162 (220)
82 2vup_A Glutathione peroxidase- 99.8 1.7E-18 5.7E-23 129.7 8.8 115 21-141 25-164 (190)
83 2yzh_A Probable thiol peroxida 99.8 2E-18 6.8E-23 127.1 9.1 117 18-143 21-148 (171)
84 1uul_A Tryparedoxin peroxidase 99.8 3.2E-18 1.1E-22 129.5 10.3 117 21-143 9-142 (202)
85 2a4v_A Peroxiredoxin DOT5; yea 99.8 2E-18 6.9E-23 125.6 8.7 114 19-141 8-130 (159)
86 1xvq_A Thiol peroxidase; thior 99.8 1.3E-18 4.5E-23 128.8 7.3 117 19-144 19-145 (175)
87 1nm3_A Protein HI0572; hybrid, 99.8 3.2E-18 1.1E-22 132.8 9.4 114 21-141 6-137 (241)
88 3uma_A Hypothetical peroxiredo 99.7 2E-18 7E-23 129.1 7.6 120 18-144 26-164 (184)
89 2k6v_A Putative cytochrome C o 99.7 1.8E-18 6E-23 126.8 6.7 114 21-140 13-149 (172)
90 2i3y_A Epididymal secretory gl 99.7 3.6E-17 1.2E-21 125.1 14.2 87 19-110 30-130 (215)
91 2pwj_A Mitochondrial peroxired 99.7 3.9E-18 1.3E-22 126.0 7.8 115 22-142 11-149 (171)
92 3tjj_A Peroxiredoxin-4; thiore 99.7 1.4E-17 4.9E-22 130.4 11.0 118 20-143 64-197 (254)
93 4hde_A SCO1/SENC family lipopr 99.7 1.1E-16 3.6E-21 118.1 12.2 120 21-143 9-149 (170)
94 2r37_A Glutathione peroxidase 99.7 1.6E-16 5.3E-21 120.9 13.5 85 21-110 14-112 (207)
95 2v2g_A Peroxiredoxin 6; oxidor 99.7 7.2E-17 2.5E-21 124.9 9.9 119 20-144 5-143 (233)
96 1prx_A HORF6; peroxiredoxin, h 99.7 1.3E-16 4.4E-21 122.8 10.7 118 20-144 7-147 (224)
97 1xcc_A 1-Cys peroxiredoxin; un 99.7 2.8E-16 9.5E-21 120.6 9.4 117 20-144 5-144 (220)
98 3keb_A Probable thiol peroxida 99.7 1.7E-16 5.8E-21 121.7 7.7 115 18-143 22-152 (224)
99 3zzx_A Thioredoxin; oxidoreduc 99.6 7.7E-16 2.6E-20 104.8 9.0 65 44-138 19-83 (105)
100 3a2v_A Probable peroxiredoxin; 99.6 6.7E-16 2.3E-20 120.5 9.5 117 21-143 8-139 (249)
101 3hxs_A Thioredoxin, TRXP; elec 99.6 6E-16 2E-20 110.0 8.3 69 44-140 50-118 (141)
102 2l57_A Uncharacterized protein 99.6 9.1E-16 3.1E-20 107.1 8.7 72 43-140 24-95 (126)
103 3ul3_B Thioredoxin, thioredoxi 99.6 1.7E-15 5.8E-20 106.2 9.5 67 43-138 40-106 (128)
104 3h79_A Thioredoxin-like protei 99.6 3.1E-15 1.1E-19 104.6 10.5 87 25-139 16-104 (127)
105 3sbc_A Peroxiredoxin TSA1; alp 99.6 3.4E-15 1.2E-19 113.8 10.8 119 20-144 25-159 (216)
106 2dj1_A Protein disulfide-isome 99.6 2.8E-15 9.5E-20 106.3 9.1 83 27-139 20-102 (140)
107 2av4_A Thioredoxin-like protei 99.6 1.1E-15 3.7E-20 110.4 6.9 66 44-138 40-105 (160)
108 2voc_A Thioredoxin; electron t 99.6 2.6E-15 9E-20 102.7 7.7 79 27-139 4-82 (112)
109 3fk8_A Disulphide isomerase; A 99.6 4.1E-15 1.4E-19 104.6 8.6 73 43-140 27-104 (133)
110 3idv_A Protein disulfide-isome 99.6 1.3E-15 4.5E-20 117.2 6.4 83 26-138 17-99 (241)
111 3die_A Thioredoxin, TRX; elect 99.6 7E-15 2.4E-19 98.9 9.2 79 26-138 5-83 (106)
112 2l5l_A Thioredoxin; structural 99.6 3.3E-15 1.1E-19 105.8 7.7 69 44-140 37-105 (136)
113 1nsw_A Thioredoxin, TRX; therm 99.6 4.7E-15 1.6E-19 99.8 7.7 67 44-139 16-82 (105)
114 2fwh_A Thiol:disulfide interch 99.6 2.1E-15 7.3E-20 106.6 5.8 71 44-139 30-103 (134)
115 2qsi_A Putative hydrogenase ex 99.6 3.9E-15 1.3E-19 105.5 7.0 83 28-144 19-103 (137)
116 3tco_A Thioredoxin (TRXA-1); d 99.6 5.8E-15 2E-19 99.7 7.6 80 27-139 7-86 (109)
117 2kuc_A Putative disulphide-iso 99.6 3.2E-15 1.1E-19 104.6 6.5 88 27-140 9-99 (130)
118 2o8v_B Thioredoxin 1; disulfid 99.6 4.4E-15 1.5E-19 104.3 7.0 82 26-139 24-105 (128)
119 2trx_A Thioredoxin; electron t 99.6 8.2E-15 2.8E-19 99.1 8.1 81 27-139 5-85 (108)
120 2dml_A Protein disulfide-isome 99.6 1.3E-14 4.4E-19 101.5 9.3 82 27-139 20-101 (130)
121 3f3q_A Thioredoxin-1; His TAG, 99.6 7.8E-15 2.7E-19 100.0 8.0 68 41-138 20-87 (109)
122 3gix_A Thioredoxin-like protei 99.6 7.9E-15 2.7E-19 105.8 7.9 66 44-138 22-87 (149)
123 3qou_A Protein YBBN; thioredox 99.6 4.8E-15 1.7E-19 117.3 7.4 83 26-139 9-91 (287)
124 1x5d_A Protein disulfide-isome 99.6 1.5E-14 5E-19 101.4 9.1 84 26-138 9-93 (133)
125 3tue_A Tryparedoxin peroxidase 99.6 2.9E-14 9.8E-19 108.9 11.2 122 17-144 25-163 (219)
126 4euy_A Uncharacterized protein 99.6 7.7E-15 2.6E-19 99.2 7.2 66 43-138 16-81 (105)
127 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.4E-14 4.7E-19 98.7 8.4 83 27-140 8-90 (111)
128 1xfl_A Thioredoxin H1; AT3G510 99.6 6.4E-15 2.2E-19 102.9 6.9 86 23-138 15-101 (124)
129 1t00_A Thioredoxin, TRX; redox 99.6 1.1E-14 3.9E-19 99.1 7.8 81 27-139 8-88 (112)
130 1z6n_A Hypothetical protein PA 99.6 4.9E-15 1.7E-19 109.0 6.1 68 44-140 53-123 (167)
131 2i4a_A Thioredoxin; acidophIle 99.5 2.4E-14 8.4E-19 96.4 9.1 81 27-139 5-85 (107)
132 4eo3_A Bacterioferritin comigr 99.5 1.6E-14 5.4E-19 116.8 9.4 113 22-145 2-119 (322)
133 2wz9_A Glutaredoxin-3; protein 99.5 1.2E-14 4E-19 105.1 7.7 109 44-182 31-143 (153)
134 2dj3_A Protein disulfide-isome 99.5 1.1E-14 3.7E-19 102.3 7.3 86 25-139 8-93 (133)
135 1x5e_A Thioredoxin domain cont 99.5 3.8E-14 1.3E-18 98.7 9.9 80 26-139 9-88 (126)
136 3qfa_C Thioredoxin; protein-pr 99.5 1.5E-14 5.2E-19 99.7 7.6 67 44-140 30-96 (116)
137 3q6o_A Sulfhydryl oxidase 1; p 99.5 3.7E-14 1.2E-18 110.0 10.5 87 25-137 13-99 (244)
138 2dj0_A Thioredoxin-related tra 99.5 1.7E-14 5.7E-19 102.2 7.9 86 25-140 8-99 (137)
139 3uvt_A Thioredoxin domain-cont 99.5 2.1E-14 7E-19 97.4 7.5 82 26-138 7-88 (111)
140 1dby_A Chloroplast thioredoxin 99.5 4.5E-14 1.5E-18 95.3 9.0 68 44-140 18-85 (107)
141 3p2a_A Thioredoxin 2, putative 99.5 3.8E-14 1.3E-18 101.6 9.0 67 43-138 53-119 (148)
142 1w4v_A Thioredoxin, mitochondr 99.5 3.1E-14 1.1E-18 98.4 8.2 67 44-139 30-96 (119)
143 2ju5_A Thioredoxin disulfide i 99.5 3.2E-14 1.1E-18 103.0 8.5 80 44-140 46-129 (154)
144 3gnj_A Thioredoxin domain prot 99.5 3.1E-14 1.1E-18 96.6 8.0 66 44-138 21-86 (111)
145 3dxb_A Thioredoxin N-terminall 99.5 1.2E-14 4.1E-19 111.3 6.4 92 16-139 4-95 (222)
146 1qgv_A Spliceosomal protein U5 99.5 2E-14 6.8E-19 102.9 7.1 66 44-138 22-87 (142)
147 3aps_A DNAJ homolog subfamily 99.5 2.7E-14 9.2E-19 98.8 7.4 69 43-139 19-87 (122)
148 2yzu_A Thioredoxin; redox prot 99.5 3.3E-14 1.1E-18 95.9 7.7 79 28-139 5-83 (109)
149 3d6i_A Monothiol glutaredoxin- 99.5 2.7E-14 9.3E-19 97.3 7.3 67 44-138 20-86 (112)
150 2i1u_A Thioredoxin, TRX, MPT46 99.5 4.1E-14 1.4E-18 97.6 8.3 81 26-138 14-94 (121)
151 1thx_A Thioredoxin, thioredoxi 99.5 4.2E-14 1.4E-18 96.5 8.2 81 27-139 10-90 (115)
152 1gh2_A Thioredoxin-like protei 99.5 3.9E-14 1.3E-18 95.8 7.9 65 44-138 20-84 (107)
153 3f9u_A Putative exported cytoc 99.5 7.9E-15 2.7E-19 107.8 4.4 93 43-140 45-143 (172)
154 2ppt_A Thioredoxin-2; thiredox 99.5 4.6E-14 1.6E-18 102.4 8.3 68 43-139 62-129 (155)
155 1faa_A Thioredoxin F; electron 99.5 4.4E-14 1.5E-18 98.1 7.3 82 27-139 21-102 (124)
156 1r26_A Thioredoxin; redox-acti 99.5 2.4E-14 8.3E-19 100.2 5.9 66 43-138 35-100 (125)
157 1ep7_A Thioredoxin CH1, H-type 99.5 6.3E-14 2.1E-18 95.3 7.8 66 45-139 24-89 (112)
158 3hz4_A Thioredoxin; NYSGXRC, P 99.5 5.1E-14 1.7E-18 100.2 7.5 67 44-139 23-89 (140)
159 1fb6_A Thioredoxin M; electron 99.5 5.4E-14 1.8E-18 94.4 7.2 67 44-139 17-83 (105)
160 1xwb_A Thioredoxin; dimerizati 99.5 1.6E-13 5.3E-18 92.2 9.3 66 44-138 19-84 (106)
161 2vlu_A Thioredoxin, thioredoxi 99.5 2E-14 6.8E-19 99.5 4.9 66 44-139 33-98 (122)
162 3ed3_A Protein disulfide-isome 99.5 3.2E-14 1.1E-18 113.8 6.7 90 19-137 12-101 (298)
163 2f51_A Thioredoxin; electron t 99.5 5.9E-14 2E-18 97.0 7.0 64 44-136 22-85 (118)
164 2e0q_A Thioredoxin; electron t 99.5 6.5E-14 2.2E-18 93.5 7.0 77 29-139 4-80 (104)
165 4f82_A Thioredoxin reductase; 99.5 1.2E-13 4.1E-18 102.1 8.9 102 37-144 39-155 (176)
166 3cxg_A Putative thioredoxin; m 99.5 3.1E-14 1E-18 100.6 5.6 65 44-138 39-104 (133)
167 3m9j_A Thioredoxin; oxidoreduc 99.5 8.7E-14 3E-18 93.4 7.6 65 44-138 19-83 (105)
168 1mek_A Protein disulfide isome 99.5 1.4E-14 4.8E-19 99.4 3.6 83 27-139 10-92 (120)
169 2oe3_A Thioredoxin-3; electron 99.5 1.1E-13 3.7E-18 95.2 7.9 67 43-139 28-94 (114)
170 2xc2_A Thioredoxinn; oxidoredu 99.5 5.9E-14 2E-18 96.5 6.1 64 44-138 32-95 (117)
171 1zma_A Bacterocin transport ac 99.5 1.6E-13 5.6E-18 94.5 8.2 71 43-138 27-97 (118)
172 3d22_A TRXH4, thioredoxin H-ty 99.5 8.2E-14 2.8E-18 98.6 6.9 66 44-139 45-110 (139)
173 3ga4_A Dolichyl-diphosphooligo 99.5 2.8E-13 9.7E-18 100.2 9.5 87 25-138 19-114 (178)
174 2djj_A PDI, protein disulfide- 99.5 5.7E-14 1.9E-18 96.9 5.5 83 26-139 9-93 (121)
175 3idv_A Protein disulfide-isome 99.5 4.2E-13 1.4E-17 103.1 10.9 102 5-138 113-214 (241)
176 3t58_A Sulfhydryl oxidase 1; o 99.5 2.5E-13 8.6E-18 116.1 10.3 97 25-147 13-112 (519)
177 2lst_A Thioredoxin; structural 99.2 6.1E-15 2.1E-19 103.3 0.0 70 43-138 17-90 (130)
178 1ti3_A Thioredoxin H, PTTRXH1; 99.4 3E-13 1E-17 92.0 8.2 65 44-138 25-89 (113)
179 2qgv_A Hydrogenase-1 operon pr 99.4 1.6E-14 5.5E-19 102.7 1.8 78 29-138 22-101 (140)
180 1v98_A Thioredoxin; oxidoreduc 99.4 5.6E-13 1.9E-17 94.5 9.5 66 44-139 50-115 (140)
181 2l6c_A Thioredoxin; oxidoreduc 99.4 1.5E-13 5E-18 93.7 6.0 68 43-140 17-84 (110)
182 2vim_A Thioredoxin, TRX; thior 99.4 4E-13 1.4E-17 89.9 8.0 65 44-138 18-82 (104)
183 1syr_A Thioredoxin; SGPP, stru 99.4 4.9E-13 1.7E-17 91.2 8.6 65 44-138 25-89 (112)
184 2j23_A Thioredoxin; immune pro 99.4 1.5E-13 5.2E-18 95.3 6.0 68 43-138 31-98 (121)
185 1wou_A Thioredoxin -related pr 99.4 3.6E-13 1.2E-17 93.7 7.7 80 44-146 23-109 (123)
186 1oaz_A Thioredoxin 1; immune s 99.4 8.6E-14 2.9E-18 97.0 4.3 82 27-140 6-101 (123)
187 3apq_A DNAJ homolog subfamily 99.4 4.2E-13 1.4E-17 101.8 8.4 69 43-140 112-180 (210)
188 3emx_A Thioredoxin; structural 99.4 8.9E-14 3E-18 98.4 4.1 71 47-139 33-103 (135)
189 2vm1_A Thioredoxin, thioredoxi 99.4 4.6E-13 1.6E-17 91.7 7.5 65 44-138 27-91 (118)
190 3qcp_A QSOX from trypanosoma b 99.4 4.9E-13 1.7E-17 112.4 8.4 87 25-138 24-115 (470)
191 3ira_A Conserved protein; meth 99.4 1.1E-12 3.8E-17 96.8 8.7 80 43-144 37-119 (173)
192 3evi_A Phosducin-like protein 99.4 2.7E-13 9.3E-18 94.1 4.8 61 45-138 23-83 (118)
193 1sen_A Thioredoxin-like protei 99.4 6.7E-14 2.3E-18 102.4 0.9 70 43-139 44-115 (164)
194 2yj7_A LPBCA thioredoxin; oxid 99.1 4.8E-14 1.6E-18 94.5 0.0 67 43-138 17-83 (106)
195 2r2j_A Thioredoxin domain-cont 99.4 1.2E-12 4.2E-17 107.8 8.2 83 26-138 7-92 (382)
196 1fo5_A Thioredoxin; disulfide 99.3 6.2E-13 2.1E-17 85.8 4.4 60 46-131 3-62 (85)
197 3ph9_A Anterior gradient prote 99.3 2E-13 6.9E-18 98.7 1.9 78 34-139 33-112 (151)
198 3uem_A Protein disulfide-isome 99.3 4.2E-12 1.4E-16 103.5 9.7 81 26-137 251-331 (361)
199 2dbc_A PDCL2, unnamed protein 99.3 2.2E-12 7.5E-17 91.2 6.9 64 44-140 29-92 (135)
200 2b5e_A Protein disulfide-isome 99.3 4.2E-12 1.4E-16 108.0 9.9 84 24-139 14-97 (504)
201 3f8u_A Protein disulfide-isome 99.3 1.3E-12 4.5E-17 110.4 6.7 81 29-139 357-437 (481)
202 1nho_A Probable thioredoxin; b 99.3 6.5E-13 2.2E-17 85.7 3.3 59 47-131 3-61 (85)
203 1xiy_A Peroxiredoxin, pfaop; a 99.3 4.1E-12 1.4E-16 94.5 7.4 117 21-143 4-150 (182)
204 1a0r_P Phosducin, MEKA, PP33; 99.3 1.4E-12 4.7E-17 101.4 5.0 65 44-139 132-196 (245)
205 2es7_A Q8ZP25_salty, putative 99.3 1.1E-12 3.7E-17 93.9 4.1 78 28-139 21-102 (142)
206 1sji_A Calsequestrin 2, calseq 99.3 3.8E-12 1.3E-16 103.6 7.4 80 27-139 14-100 (350)
207 2xhf_A Peroxiredoxin 5; oxidor 99.3 9.7E-12 3.3E-16 91.6 8.7 121 17-143 13-148 (171)
208 1a8l_A Protein disulfide oxido 99.3 9.6E-12 3.3E-16 94.8 8.9 70 44-139 133-203 (226)
209 3iv4_A Putative oxidoreductase 99.3 1.3E-11 4.5E-16 84.2 8.3 75 43-146 22-97 (112)
210 1wmj_A Thioredoxin H-type; str 99.3 4E-13 1.4E-17 93.7 0.5 66 44-139 35-100 (130)
211 1ilo_A Conserved hypothetical 99.3 2.1E-11 7.1E-16 77.3 8.4 62 48-145 2-63 (77)
212 3f8u_A Protein disulfide-isome 99.3 6.6E-12 2.3E-16 106.1 7.6 82 27-138 4-85 (481)
213 2hls_A Protein disulfide oxido 99.3 2.4E-11 8.4E-16 94.2 10.1 65 44-131 137-202 (243)
214 3kp8_A Vkorc1/thioredoxin doma 99.2 9.2E-13 3.2E-17 89.6 0.2 64 44-138 11-74 (106)
215 3dml_A Putative uncharacterize 99.2 1E-12 3.4E-17 90.7 0.3 70 44-138 17-86 (116)
216 2b5e_A Protein disulfide-isome 99.2 1.5E-11 5.2E-16 104.5 6.6 82 27-139 361-442 (504)
217 3us3_A Calsequestrin-1; calciu 99.2 4.8E-11 1.6E-15 97.9 9.2 82 25-138 14-101 (367)
218 2trc_P Phosducin, MEKA, PP33; 99.2 6.4E-12 2.2E-16 96.0 3.6 65 44-139 119-183 (217)
219 2ywm_A Glutaredoxin-like prote 99.1 2E-10 6.7E-15 87.8 7.7 61 44-131 135-195 (229)
220 2dlx_A UBX domain-containing p 99.1 3.5E-10 1.2E-14 81.8 7.9 81 32-138 29-113 (153)
221 3apo_A DNAJ homolog subfamily 99.1 3.7E-10 1.3E-14 100.7 9.4 66 44-138 454-519 (780)
222 3apo_A DNAJ homolog subfamily 99.1 2.3E-10 7.7E-15 102.1 7.2 68 43-139 673-740 (780)
223 2ywm_A Glutaredoxin-like prote 99.0 1.4E-09 4.6E-14 83.0 8.2 66 44-135 20-89 (229)
224 2c0g_A ERP29 homolog, windbeut 99.0 2.6E-09 8.8E-14 83.1 9.4 84 22-135 14-103 (248)
225 2k8s_A Thioredoxin; dimer, str 99.0 5.1E-10 1.8E-14 71.7 4.3 58 49-131 4-61 (80)
226 1eej_A Thiol:disulfide interch 99.0 3E-09 1E-13 80.9 9.2 82 44-131 85-187 (216)
227 3hd5_A Thiol:disulfide interch 99.0 2.8E-09 9.5E-14 79.5 8.8 43 44-89 24-66 (195)
228 1a8l_A Protein disulfide oxido 98.9 2.5E-09 8.5E-14 81.3 8.0 67 44-138 21-88 (226)
229 3gyk_A 27KDA outer membrane pr 98.9 9.4E-09 3.2E-13 75.2 9.7 40 44-87 21-60 (175)
230 2fgx_A Putative thioredoxin; N 98.9 3.5E-09 1.2E-13 71.9 6.5 63 47-143 30-92 (107)
231 2djk_A PDI, protein disulfide- 98.9 1.2E-09 4E-14 76.9 4.2 66 44-138 22-90 (133)
232 2e7p_A Glutaredoxin; thioredox 98.9 4.4E-09 1.5E-13 71.7 7.0 68 44-144 18-85 (116)
233 2qc7_A ERP31, ERP28, endoplasm 98.8 9.9E-09 3.4E-13 79.4 8.4 82 26-139 7-94 (240)
234 3h93_A Thiol:disulfide interch 98.8 2.6E-08 8.9E-13 74.0 9.6 42 44-88 24-65 (192)
235 1ttz_A Conserved hypothetical 98.8 4.4E-09 1.5E-13 68.7 4.5 51 49-131 3-53 (87)
236 1ego_A Glutaredoxin; electron 98.8 1.2E-08 4.1E-13 65.6 5.8 60 49-131 3-64 (85)
237 2znm_A Thiol:disulfide interch 98.7 3.2E-08 1.1E-12 73.5 8.0 42 44-88 21-62 (195)
238 1wjk_A C330018D20RIK protein; 98.7 9.8E-09 3.4E-13 68.7 3.7 59 44-131 14-72 (100)
239 1hyu_A AHPF, alkyl hydroperoxi 98.7 5.5E-08 1.9E-12 83.1 9.0 61 44-131 116-176 (521)
240 1t3b_A Thiol:disulfide interch 98.6 1.3E-07 4.5E-12 71.6 8.9 85 44-138 85-190 (211)
241 1v58_A Thiol:disulfide interch 98.6 2.8E-07 9.4E-12 71.2 9.8 89 44-139 96-211 (241)
242 3kp9_A Vkorc1/thioredoxin doma 98.6 1.3E-08 4.6E-13 80.7 1.8 59 49-138 201-259 (291)
243 1z6m_A Conserved hypothetical 98.5 1.5E-06 5.1E-11 63.3 11.4 44 44-88 26-69 (175)
244 3hz8_A Thiol:disulfide interch 98.5 4.6E-07 1.6E-11 67.5 8.7 43 44-89 23-65 (193)
245 3uem_A Protein disulfide-isome 98.5 2E-07 6.7E-12 75.7 7.1 68 45-138 135-204 (361)
246 2hls_A Protein disulfide oxido 98.5 2.9E-07 1E-11 71.1 7.4 66 45-135 25-94 (243)
247 2rem_A Disulfide oxidoreductas 98.5 6.1E-07 2.1E-11 66.4 8.7 42 44-88 24-65 (193)
248 1h75_A Glutaredoxin-like prote 98.5 6E-07 2E-11 57.0 6.9 54 49-131 3-56 (81)
249 1kte_A Thioltransferase; redox 98.3 5.9E-07 2E-11 60.0 3.8 61 49-131 14-74 (105)
250 2hze_A Glutaredoxin-1; thiored 98.2 4.7E-06 1.6E-10 56.7 7.2 62 48-131 20-81 (114)
251 1un2_A DSBA, thiol-disulfide i 98.2 5.3E-07 1.8E-11 67.6 2.2 44 44-90 112-158 (197)
252 1r7h_A NRDH-redoxin; thioredox 98.2 4E-06 1.4E-10 52.1 5.9 54 49-131 3-56 (75)
253 4dvc_A Thiol:disulfide interch 98.1 1.7E-05 5.7E-10 57.8 9.3 42 44-86 20-61 (184)
254 2cq9_A GLRX2 protein, glutared 98.1 5.3E-06 1.8E-10 57.9 6.1 57 50-131 30-86 (130)
255 1fov_A Glutaredoxin 3, GRX3; a 98.1 1.2E-05 4E-10 50.8 7.3 55 49-131 3-57 (82)
256 2ht9_A Glutaredoxin-2; thiored 98.1 5.9E-06 2E-10 58.9 6.4 57 50-131 52-108 (146)
257 3c1r_A Glutaredoxin-1; oxidize 98.1 1.6E-05 5.4E-10 54.5 7.9 61 49-131 27-88 (118)
258 3qmx_A Glutaredoxin A, glutare 98.0 2E-05 6.9E-10 52.3 6.5 57 47-131 16-73 (99)
259 2klx_A Glutaredoxin; thioredox 98.0 1.8E-05 6E-10 51.1 6.1 53 49-131 8-61 (89)
260 2khp_A Glutaredoxin; thioredox 97.9 3.7E-05 1.3E-09 49.8 7.4 55 49-131 8-62 (92)
261 3gv1_A Disulfide interchange p 97.9 4E-05 1.4E-09 54.6 8.2 83 44-138 13-118 (147)
262 3rhb_A ATGRXC5, glutaredoxin-C 97.9 3.3E-05 1.1E-09 52.2 7.2 58 49-131 21-79 (113)
263 3nzn_A Glutaredoxin; structura 97.9 4.2E-05 1.4E-09 50.9 7.6 61 48-131 23-83 (103)
264 2yan_A Glutaredoxin-3; oxidore 97.9 3.4E-05 1.1E-09 51.5 6.7 58 44-131 16-78 (105)
265 3msz_A Glutaredoxin 1; alpha-b 97.9 3.5E-05 1.2E-09 49.3 6.0 58 48-131 5-67 (89)
266 3ctg_A Glutaredoxin-2; reduced 97.8 8.5E-05 2.9E-09 51.7 8.2 61 49-131 39-100 (129)
267 3ic4_A Glutaredoxin (GRX-1); s 97.8 3.5E-05 1.2E-09 49.9 5.5 60 49-131 14-73 (92)
268 3h8q_A Thioredoxin reductase 3 97.8 0.00011 3.7E-09 49.9 7.7 58 49-131 19-76 (114)
269 2lqo_A Putative glutaredoxin R 97.7 9.2E-05 3.1E-09 48.5 5.7 58 49-138 6-64 (92)
270 3l9v_A Putative thiol-disulfid 97.6 1.7E-05 5.8E-10 58.7 1.6 42 44-88 13-57 (189)
271 3feu_A Putative lipoprotein; a 97.4 8.4E-05 2.9E-09 54.8 3.2 30 45-74 22-51 (185)
272 1wik_A Thioredoxin-like protei 97.4 0.00036 1.2E-08 46.8 5.8 58 44-131 14-76 (109)
273 3l4n_A Monothiol glutaredoxin- 97.3 0.00062 2.1E-08 47.2 6.8 61 49-131 16-76 (127)
274 4f9z_D Endoplasmic reticulum r 97.3 0.001 3.4E-08 50.4 8.2 67 46-138 132-200 (227)
275 2ec4_A FAS-associated factor 1 97.3 0.00087 3E-08 49.2 7.5 92 31-138 37-141 (178)
276 3l9s_A Thiol:disulfide interch 97.1 0.00026 8.8E-09 52.4 2.9 44 44-88 20-66 (191)
277 1aba_A Glutaredoxin; electron 97.0 0.0022 7.6E-08 40.8 6.5 57 49-131 2-70 (87)
278 3tdg_A DSBG, putative uncharac 97.0 0.004 1.4E-07 48.6 8.8 40 44-88 146-185 (273)
279 3zyw_A Glutaredoxin-3; metal b 96.8 0.0034 1.2E-07 42.2 6.0 54 50-131 19-77 (111)
280 2wci_A Glutaredoxin-4; redox-a 96.7 0.0035 1.2E-07 43.8 6.0 59 44-131 34-96 (135)
281 3c7m_A Thiol:disulfide interch 96.7 0.0022 7.4E-08 46.9 5.0 42 44-88 16-58 (195)
282 1t1v_A SH3BGRL3, SH3 domain-bi 96.6 0.0051 1.8E-07 39.7 5.9 55 49-131 4-66 (93)
283 2ct6_A SH3 domain-binding glut 96.4 0.0079 2.7E-07 40.3 6.2 35 49-92 10-50 (111)
284 3gha_A Disulfide bond formatio 96.4 0.0058 2E-07 45.4 6.0 44 44-88 28-72 (202)
285 3ipz_A Monothiol glutaredoxin- 96.4 0.009 3.1E-07 39.9 6.0 49 55-131 31-79 (109)
286 3gx8_A Monothiol glutaredoxin- 96.2 0.018 6.2E-07 39.2 7.0 52 55-131 29-80 (121)
287 1nm3_A Protein HI0572; hybrid, 96.2 0.019 6.6E-07 43.5 7.8 56 47-131 170-225 (241)
288 3f4s_A Alpha-DSBA1, putative u 96.1 0.012 4.1E-07 44.6 6.3 44 44-88 38-82 (226)
289 2wem_A Glutaredoxin-related pr 96.1 0.016 5.6E-07 39.3 6.2 50 55-131 33-82 (118)
290 4h86_A Peroxiredoxin type-2; o 96.1 0.018 6.1E-07 42.8 6.8 82 41-124 65-152 (199)
291 3gn3_A Putative protein-disulf 95.7 0.018 6.1E-07 42.1 5.6 42 44-88 13-55 (182)
292 3bci_A Disulfide bond protein 95.7 0.014 4.8E-07 42.4 4.9 42 44-86 10-52 (186)
293 2axo_A Hypothetical protein AT 95.7 0.044 1.5E-06 42.7 7.8 72 46-131 43-120 (270)
294 3gmf_A Protein-disulfide isome 95.6 0.032 1.1E-06 41.6 6.5 44 44-88 14-58 (205)
295 2l4c_A Endoplasmic reticulum r 95.0 0.065 2.2E-06 36.6 6.2 58 43-136 37-94 (124)
296 3q6o_A Sulfhydryl oxidase 1; p 94.8 0.045 1.5E-06 41.4 5.4 35 107-143 187-221 (244)
297 1sji_A Calsequestrin 2, calseq 94.7 0.08 2.7E-06 42.3 7.0 65 46-136 246-315 (350)
298 1u6t_A SH3 domain-binding glut 94.7 0.1 3.6E-06 35.5 6.4 13 49-61 2-14 (121)
299 2jad_A Yellow fluorescent prot 93.7 0.082 2.8E-06 42.9 5.0 61 49-131 263-324 (362)
300 1z3e_A Regulatory protein SPX; 91.9 0.47 1.6E-05 32.5 6.2 47 49-102 3-50 (132)
301 2wul_A Glutaredoxin related pr 91.7 0.51 1.7E-05 31.9 6.0 66 37-131 12-82 (118)
302 1rw1_A Conserved hypothetical 91.7 0.18 6.2E-06 33.7 3.8 48 49-103 2-50 (114)
303 3l78_A Regulatory protein SPX; 91.4 0.48 1.7E-05 31.9 5.8 47 49-102 2-49 (120)
304 2h8l_A Protein disulfide-isome 91.4 0.11 3.9E-06 39.5 2.8 105 44-188 23-137 (252)
305 3us3_A Calsequestrin-1; calciu 91.4 0.43 1.5E-05 38.4 6.4 71 46-138 248-319 (367)
306 2h8l_A Protein disulfide-isome 91.3 0.96 3.3E-05 34.2 8.0 67 47-138 131-205 (252)
307 2kok_A Arsenate reductase; bru 91.3 0.22 7.6E-06 33.5 3.9 49 49-104 7-56 (120)
308 2x8g_A Thioredoxin glutathione 91.1 0.47 1.6E-05 40.7 6.7 42 49-97 20-61 (598)
309 4f9z_D Endoplasmic reticulum r 90.8 0.41 1.4E-05 35.7 5.4 58 43-136 25-82 (227)
310 3fz4_A Putative arsenate reduc 90.3 0.95 3.2E-05 30.5 6.4 49 48-103 4-53 (120)
311 3t58_A Sulfhydryl oxidase 1; o 90.0 1.5 5.2E-05 37.1 8.8 28 114-143 194-221 (519)
312 3rdw_A Putative arsenate reduc 89.4 0.38 1.3E-05 32.5 3.8 49 49-104 7-56 (121)
313 3gkx_A Putative ARSC family re 88.3 0.81 2.8E-05 30.8 4.9 48 49-103 6-54 (120)
314 1s3c_A Arsenate reductase; ARS 85.9 0.62 2.1E-05 32.4 3.2 49 49-104 4-53 (141)
315 2r2j_A Thioredoxin domain-cont 85.2 2.1 7.1E-05 34.4 6.6 65 44-136 235-302 (382)
316 3bj5_A Protein disulfide-isome 84.3 3.4 0.00012 28.6 6.6 67 44-136 30-99 (147)
317 3f0i_A Arsenate reductase; str 83.2 0.53 1.8E-05 31.7 1.9 50 49-105 6-56 (119)
318 2in3_A Hypothetical protein; D 83.0 2.3 7.8E-05 31.0 5.5 38 47-85 8-45 (216)
319 3kzq_A Putative uncharacterize 80.9 2.4 8.1E-05 30.9 4.9 40 47-87 3-42 (208)
320 3ec3_A Protein disulfide-isome 74.0 6.9 0.00024 29.3 5.8 57 45-136 25-81 (250)
321 2g2q_A Glutaredoxin-2; thiored 73.4 6.7 0.00023 26.3 4.8 36 46-88 2-37 (124)
322 1t4y_A Adaptive-response senso 66.5 24 0.00083 23.0 9.9 73 48-146 13-85 (105)
323 3ec3_A Protein disulfide-isome 63.8 14 0.00048 27.6 5.6 66 44-138 131-204 (250)
324 2imf_A HCCA isomerase, 2-hydro 59.4 11 0.00037 27.1 4.2 28 48-75 2-29 (203)
325 3feu_A Putative lipoprotein; a 57.9 9.3 0.00032 27.2 3.5 41 91-131 107-158 (185)
326 3l9s_A Thiol:disulfide interch 54.1 13 0.00043 26.7 3.7 41 91-131 106-157 (191)
327 4f03_A Glutathione transferase 53.9 17 0.00058 26.6 4.5 30 53-89 18-47 (253)
328 3l9v_A Putative thiol-disulfid 53.6 13 0.00045 26.5 3.7 41 91-131 99-151 (189)
329 4g10_A Glutathione S-transfera 51.1 28 0.00097 26.1 5.4 33 50-89 8-40 (265)
330 3f4s_A Alpha-DSBA1, putative u 50.8 11 0.00038 28.0 3.0 23 115-139 160-183 (226)
331 3gn3_A Putative protein-disulf 48.7 13 0.00044 26.5 3.0 17 115-131 144-160 (182)
332 3vhs_A ATPase wrnip1; zinc fin 47.5 1.5 5.1E-05 20.9 -1.5 11 56-66 8-18 (29)
333 4glt_A Glutathione S-transfera 46.5 20 0.00069 26.0 3.8 32 51-89 25-56 (225)
334 3gha_A Disulfide bond formatio 42.2 19 0.00067 25.9 3.1 18 114-131 152-169 (202)
335 3kzq_A Putative uncharacterize 41.3 28 0.00094 25.0 3.9 21 115-138 159-179 (208)
336 1r4w_A Glutathione S-transfera 40.1 17 0.00056 26.7 2.5 28 47-74 6-33 (226)
337 2jvx_A NF-kappa-B essential mo 39.3 6.1 0.00021 19.4 -0.1 20 56-75 5-24 (28)
338 4hoj_A REGF protein; GST, glut 37.2 91 0.0031 21.9 6.1 32 51-89 6-37 (210)
339 1wwj_A Circadian clock protein 35.9 17 0.00059 23.8 1.7 65 45-136 6-70 (105)
340 2in3_A Hypothetical protein; D 35.8 34 0.0012 24.4 3.6 22 114-138 165-186 (216)
341 4hi7_A GI20122; GST, glutathio 34.6 35 0.0012 24.6 3.5 34 50-90 5-38 (228)
342 3ir4_A Glutaredoxin 2; glutath 33.7 96 0.0033 21.9 5.8 34 50-90 5-38 (218)
343 3vln_A GSTO-1, glutathione S-t 32.7 1.2E+02 0.0043 21.6 6.4 34 49-89 24-57 (241)
344 4g6v_A Adhesin/hemolysin; tRNA 32.0 1.4E+02 0.0047 21.3 8.3 73 44-144 97-172 (176)
345 3gl5_A Putative DSBA oxidoredu 31.8 89 0.0031 23.0 5.4 42 46-88 2-43 (239)
346 3mjh_B Early endosome antigen 31.7 10 0.00034 19.5 0.0 19 57-75 8-26 (34)
347 3ktb_A Arsenical resistance op 31.6 1.1E+02 0.0037 19.9 6.6 25 115-146 65-89 (106)
348 1vkf_A Glycerol uptake operon 29.5 68 0.0023 23.2 4.2 46 91-138 71-116 (188)
349 3kgk_A Arsenical resistance op 29.0 1.2E+02 0.0042 19.8 6.5 24 114-144 61-84 (110)
350 3lyk_A Stringent starvation pr 28.6 1.2E+02 0.0039 21.4 5.5 35 48-89 6-40 (216)
351 1k0d_A URE2 protein; nitrate a 26.9 1.1E+02 0.0037 22.4 5.2 34 49-89 20-53 (260)
352 4aq4_A SN-glycerol-3-phosphate 26.7 1.8E+02 0.0062 22.5 6.8 42 45-89 3-44 (419)
353 4g68_A ABC transporter; transp 25.5 1.3E+02 0.0043 24.2 5.7 43 44-88 59-101 (456)
354 3m3m_A Glutathione S-transfera 25.2 1.1E+02 0.0036 21.4 4.7 34 49-89 4-37 (210)
355 3qav_A RHO-class glutathione S 24.9 65 0.0022 23.4 3.5 35 49-90 27-61 (243)
356 3q18_A GSTO-2, glutathione S-t 24.5 1.8E+02 0.006 20.8 5.9 34 49-89 24-57 (239)
357 1r5a_A Glutathione transferase 23.6 1.5E+02 0.005 20.8 5.2 33 50-89 4-36 (218)
358 3f6d_A Adgstd4-4, glutathione 23.3 70 0.0024 22.6 3.4 33 51-90 3-35 (219)
359 2imi_A Epsilon-class glutathio 22.7 99 0.0034 21.9 4.1 33 50-89 5-37 (221)
360 2c3n_A Glutathione S-transfera 22.4 76 0.0026 23.2 3.5 34 49-89 10-43 (247)
361 3rbt_A Glutathione transferase 22.1 2.2E+02 0.0077 20.4 7.3 34 49-89 27-60 (246)
362 3m8n_A Possible glutathione S- 21.9 97 0.0033 22.0 4.0 34 49-89 4-37 (225)
363 3kts_A Glycerol uptake operon 21.8 1.4E+02 0.0046 21.7 4.6 69 67-138 43-115 (192)
364 1axd_A Glutathione S-transfera 21.0 97 0.0033 21.5 3.7 33 50-89 4-36 (209)
365 4iel_A Glutathione S-transfera 20.3 81 0.0028 22.6 3.2 33 49-88 24-56 (229)
No 1
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.93 E-value=4.4e-25 Score=158.17 Aligned_cols=136 Identities=36% Similarity=0.744 Sum_probs=119.8
Q ss_pred cccc-eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhC
Q psy8729 23 KTYN-IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101 (190)
Q Consensus 23 ~~~~-~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~ 101 (190)
..|. |++.+.++....++.+ ++++++|+||++||++|+.++|.|+++++++++. .++.+++|++|.+.+.+++|+++
T Consensus 6 ~~P~~f~l~~~~g~~~~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~ 83 (144)
T 1i5g_A 6 FFPYSTNVLKGAAADIALPSL-AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAK 83 (144)
T ss_dssp SCSSCSEEEETTEEEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTT
T ss_pred hCCCceEEEcCCCCEecHHHc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHh
Confidence 4566 7888888777777666 7899999999999999999999999999999852 25999999999999999999999
Q ss_pred CCCCcccCCc-hhHHHHHHHcCCCCCCeeeeeeec-CCCceEEEccccccccccCCCCCcCCCCc
Q psy8729 102 MPWPAIPYAS-ETRQSLASLYNVHGIPSLILLAVE-AGGRLDVITTEARHELSEDPDGEFFPWPP 164 (190)
Q Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~v~~~P~~~l~~id-~~g~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (190)
++|..+++.. +....+.+.|++.++|++++ +| ++| +++...+.+...++..++.+||.+
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~~G--~i~~~~~~~~~~~~~~~~~~~w~~ 144 (144)
T 1i5g_A 84 MPWLALPFEDRKGMEFLTTGFDVKSIPTLVG--VEADSG--NIITTQARTMVVKDPEAKDFPWPN 144 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHTTCCSSSEEEE--EETTTC--CEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CCccccccCchHHHHHHHHHcCCCCCCEEEE--EECCCC--cEEeccchhhhhhCcccccCCCCC
Confidence 9988888876 55789999999999999999 99 899 888888888888899999999964
No 2
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.93 E-value=2.2e-25 Score=163.99 Aligned_cols=136 Identities=42% Similarity=0.806 Sum_probs=120.2
Q ss_pred cccce-eccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhC
Q psy8729 23 KTYNI-GLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101 (190)
Q Consensus 23 ~~~~~-~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~ 101 (190)
..|++ .+.+.++ ...++.+ +++++||+||++||++|+.++|.|++++++|++. .++.+++|++|.+.+.+++|+++
T Consensus 27 ~~P~f~~l~~~~g-~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~ 103 (165)
T 3s9f_A 27 HLGEALKLRKQAD-TADMDSL-SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAK 103 (165)
T ss_dssp HHHHTSCEEETTE-EECSGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTT
T ss_pred cCCcceeeecCCC-cccHHHc-CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHh
Confidence 45666 7777777 5555665 7899999999999999999999999999999863 26999999999999999999999
Q ss_pred CCCCcccCCchhH-HHHHHHcCCCCCCeeeeeeecCC-CceEEEccccccccccCCCCCcCCCCcc
Q psy8729 102 MPWPAIPYASETR-QSLASLYNVHGIPSLILLAVEAG-GRLDVITTEARHELSEDPDGEFFPWPPK 165 (190)
Q Consensus 102 ~~~~~~~~~~~~~-~~~~~~~~v~~~P~~~l~~id~~-g~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (190)
++|..+++..+.. ..+.+.|++.++|++++ ||++ | +++...+.....++...+.|||.+.
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~l--id~~~G--~iv~~~~~~~~~~d~~~~~fpw~~~ 165 (165)
T 3s9f_A 104 MPWLSIPFANRNIVEALTKKYSVESIPTLIG--LNADTG--DTVTTRARHALTQDPMGEQFPWRDE 165 (165)
T ss_dssp CSSEECCTTCHHHHHHHHHHTTCCSSSEEEE--EETTTC--CEEESCHHHHHHHCTTCTTTTCCCC
T ss_pred CCCcccccCchhHHHHHHHHcCCCCCCEEEE--EeCCCC--EEEecccHHHHhhCcccccCCCCCC
Confidence 9998888887654 89999999999999999 9998 9 8899999899999999999999863
No 3
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.92 E-value=9.8e-25 Score=156.78 Aligned_cols=136 Identities=42% Similarity=0.801 Sum_probs=119.2
Q ss_pred cccc-eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhC
Q psy8729 23 KTYN-IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101 (190)
Q Consensus 23 ~~~~-~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~ 101 (190)
..|+ |.+.+.++ ...++.+ ++++++|+||++||++|+.++|.|+++++++++. .++.+++|++|.+.+.+++|+++
T Consensus 7 ~~P~~f~l~~~~g-~~~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 7 YLPGIEKLRRGDG-EVEVKSL-AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAK 83 (146)
T ss_dssp TSTTCCEEEETTE-EEEGGGG-TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTT
T ss_pred hCCCceEEEcCCC-CCcHHHh-CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHH
Confidence 4566 78888887 6666665 7899999999999999999999999999999842 26999999999999999999999
Q ss_pred CCCCcccCCc-hhHHHHHHHcCCCCCCeeeeeeec-CCCceEEEccccccccccCCCCCcCCCCcc
Q psy8729 102 MPWPAIPYAS-ETRQSLASLYNVHGIPSLILLAVE-AGGRLDVITTEARHELSEDPDGEFFPWPPK 165 (190)
Q Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~v~~~P~~~l~~id-~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (190)
++|..+++.. +....+.+.|++.++|++++ +| ++| +++...+.....++.....++|.+.
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~l--id~~~G--~i~~~~~~~~~~~~~~~~~~~w~~~ 145 (146)
T 1o8x_A 84 MPWLAVPFAQSEAVQKLSKHFNVESIPTLIG--VDADSG--DVVTTRARATLVKDPEGEQFPWKDA 145 (146)
T ss_dssp CSSEECCGGGHHHHHHHHHHTTCCSSSEEEE--EETTTC--CEEESCHHHHHTTCTTCTTTTCCCC
T ss_pred CCceeeccchhhHHHHHHHHhCCCCCCEEEE--EECCCC--eEEEecchhHHhhCCccccCCCCCC
Confidence 9988888775 55788999999999999999 99 899 8888888888899999999999875
No 4
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.92 E-value=3.3e-24 Score=153.31 Aligned_cols=135 Identities=39% Similarity=0.756 Sum_probs=117.5
Q ss_pred cccce-eccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhC
Q psy8729 23 KTYNI-GLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101 (190)
Q Consensus 23 ~~~~~-~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~ 101 (190)
..|++ .+.+.++ ...++.+ ++++++|+||++||++|+.+.|.|+++++++++. .++.+++|++|.+.+.+++|+++
T Consensus 7 ~~p~~~~l~~~~g-~~~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~ 83 (144)
T 1o73_A 7 YLPGATNLLSKSG-EVSLGSL-VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGK 83 (144)
T ss_dssp TSCTTCCBBCTTS-CBCSGGG-TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTT
T ss_pred hCccceEeecCCC-cCcHHHh-CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHh
Confidence 45665 7888877 6666665 7899999999999999999999999999999843 26999999999999999999999
Q ss_pred CCCCcccCCc-hhHHHHHHHcCCCCCCeeeeeeec-CCCceEEEccccccccccCCCCCcCCCCc
Q psy8729 102 MPWPAIPYAS-ETRQSLASLYNVHGIPSLILLAVE-AGGRLDVITTEARHELSEDPDGEFFPWPP 164 (190)
Q Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~v~~~P~~~l~~id-~~g~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (190)
++|..+++.. +....+.+.|++.++|++++ +| ++| +++...+......+..+..|+|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~l--id~~~G--~i~~~~~~~~~~~~~~~~~~~W~~ 144 (144)
T 1o73_A 84 MPWLALPFDQRSTVSELGKTFGVESIPTLIT--INADTG--AIIGTQARTRVIEDPDGANFPWPN 144 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHHTCCSSSEEEE--EETTTC--CEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CCceEeeccchhHHHHHHHHcCCCCCCEEEE--EECCCC--eEEecchhhHHhhCCCccCCCCCC
Confidence 9988888775 55788999999999999999 99 899 888888888888999999999964
No 5
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.89 E-value=2.9e-23 Score=148.42 Aligned_cols=120 Identities=13% Similarity=0.215 Sum_probs=99.7
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHH---HHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIE---TYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~---l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
..+..+|+|.+.+.+|....++.+ .+++++|+||++||++|+.++|.|++ +++++++. ++.+++|+.|.+.+.+
T Consensus 6 ~~G~~ap~f~l~~~~g~~~~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 6 RLGTKALNFTYTLDSGVKGTLYQF-PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEELDEW 82 (142)
T ss_dssp CTTSBCCCCEEEETTSCEEETTTC-CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSCHHHH
T ss_pred cCCCccCCcEEEcCCCCEeeHHHc-CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCCHHHH
Confidence 345678888888888877777776 68999999999999999999999999 99999875 5999999999999999
Q ss_pred HHHHhCCCCCcccCCchhH--HHHHHHcCCCCCCeeeeeeecCCCceEEEccc
Q psy8729 96 QSYLSGMPWPAIPYASETR--QSLASLYNVHGIPSLILLAVEAGGRLDVITTE 146 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~~ 146 (190)
++|+++++. .++...|.. ..+.+.|++.++|++++ +|++| +++...
T Consensus 83 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~~~ 130 (142)
T 3eur_A 83 KKHRNDFAK-EWTNGYDKELVIKNKNLYDLRAIPTLYL--LDKNK--TVLLKD 130 (142)
T ss_dssp HHHGGGSCT-TSEEEECTTCHHHHTTCSCCTTCSEEEE--ECTTC--BEEEEE
T ss_pred HHHHHhccc-ccccccCccchhhhhhhcCCCcCCeEEE--ECCCC--cEEecC
Confidence 999998875 334444443 34788999999999999 99999 555433
No 6
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.88 E-value=2.2e-22 Score=143.40 Aligned_cols=117 Identities=15% Similarity=0.283 Sum_probs=100.7
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHH---HHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIE---TYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~---l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
.+...|+|++.+.++....++.+ +|++++|+||++||++|+.++|.|.+ +++++++. ++.+++|++|.+.+.++
T Consensus 3 ~G~~~p~f~l~~~~g~~~~l~~~-~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 3 AGMKAADFTYVTVHGDNSRMSRL-KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDENREEWA 79 (142)
T ss_dssp TTSBCCCCEEECTTCCEEEGGGC-CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSSCHHHHH
T ss_pred CCCcCCCCEEECCCCCEEEhhhc-CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecCCHHHHH
Confidence 45678889999888877777776 79999999999999999999999988 99999875 49999999999999999
Q ss_pred HHHhCCCCCcccCCchhHHHHHH--HcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 97 SYLSGMPWPAIPYASETRQSLAS--LYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
+|++++++ .++...|....+.. .|++.++|++++ +|++| +++.
T Consensus 80 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~ 124 (142)
T 3ewl_A 80 TKAVYMPQ-GWIVGWNKAGDIRTRQLYDIRATPTIYL--LDGRK--RVIL 124 (142)
T ss_dssp HHHTTSCT-TCEEEECTTCHHHHTTCSCCCSSSEEEE--ECTTC--BEEE
T ss_pred HHHHHcCC-CcceeeCCccchhhHHHcCCCCCCeEEE--ECCCC--CEEe
Confidence 99999986 56666666666665 899999999999 99999 5555
No 7
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.88 E-value=1.3e-22 Score=145.14 Aligned_cols=119 Identities=17% Similarity=0.121 Sum_probs=93.9
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
..+...|+|++ +.++....++.+ +|++++|+||++||++|+.++|.|++++++|+++ ++.+++|++|.+.+.+++|
T Consensus 8 ~~G~~~P~f~l-~~~g~~~~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~ 83 (143)
T 4fo5_A 8 NPGDLAPRIEF-LGNDAKASFHNQ-LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTET 83 (143)
T ss_dssp STTSBCCCCCC------CCCSCCS-SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHH
T ss_pred CCcccCCceEE-cCCCCEEEHHHh-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHH
Confidence 34556788888 677776666665 7899999999999999999999999999999865 5999999999999999999
Q ss_pred HhCCCCCcccCCch---hHHHHHHHcCCCCCCeeeeeeecCCCceEEEcc
Q psy8729 99 LSGMPWPAIPYASE---TRQSLASLYNVHGIPSLILLAVEAGGRLDVITT 145 (190)
Q Consensus 99 ~~~~~~~~~~~~~~---~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~ 145 (190)
+++++....+...+ ....+.+.|++.++|++++ ||++| +++..
T Consensus 84 ~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~~ 129 (143)
T 4fo5_A 84 VKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFL--INDEG--VIIAA 129 (143)
T ss_dssp HHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEE--ECTTS--BEEEE
T ss_pred HHHhCCCCceeeecccccchHHHHHcCCCCCCcEEE--ECCCC--EEEEc
Confidence 99877533133222 2568999999999999999 99999 55544
No 8
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.87 E-value=1.9e-21 Score=140.88 Aligned_cols=117 Identities=25% Similarity=0.354 Sum_probs=97.0
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
...+...|+|++.+.+|....++.+ +|++++|+||++||++|+.++|.|++++++|+++ ++.+++|++|...+.++.
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDL-KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTG-GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHh-CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHH
Confidence 3345567889998888877767666 7899999999999999999999999999999876 499999999999888999
Q ss_pred HHhCCCCCcccCCchhHH---HHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 98 YLSGMPWPAIPYASETRQ---SLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
|..+..| +...|... .+.+.|++.++|++++ +|++| +++.
T Consensus 86 ~~~~~~~---~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~ 128 (152)
T 2lrt_A 86 SADNLPW---VCVRDANGAYSSYISLYNVTNLPSVFL--VNRNN--ELSA 128 (152)
T ss_dssp HHTTCSS---EEEECSSGGGCHHHHHHTCCSCSEEEE--EETTT--EEEE
T ss_pred HHhCCCc---eEEECCCCcchHHHHHcCcccCceEEE--ECCCC--eEEE
Confidence 9877544 44444433 4899999999999999 99999 5444
No 9
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.87 E-value=8.1e-22 Score=140.94 Aligned_cols=117 Identities=15% Similarity=0.276 Sum_probs=102.1
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
..+...|+|.+.+.++....++.+ ++++++|+||++||++|+.+.|.|++++++++++ ++.+++|++|.+.+.+++|
T Consensus 6 ~~G~~~p~~~l~~~~g~~~~l~~~-~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~ 82 (148)
T 3hcz_A 6 LLGKKAPNLYMTDTTGTYRYLYDV-QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKF 82 (148)
T ss_dssp CTTSBCCCCCCBCTTSCBCCGGGC-CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHH
T ss_pred CCCCcCCceEEecCCCCEEEhHHc-CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHH
Confidence 345678889998888777777665 7899999999999999999999999999999876 4999999999888899999
Q ss_pred HhCCCCCcccCCchhHHH--HHHHcCCCCCCeeeeeeecCCCce
Q psy8729 99 LSGMPWPAIPYASETRQS--LASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++++++..++...|.... +.+.|++.++|++++ +|++|++
T Consensus 83 ~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~l--id~~G~i 124 (148)
T 3hcz_A 83 IRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYV--LDKNKVI 124 (148)
T ss_dssp HHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEE--ECTTCBE
T ss_pred HHHcCCCCceEEeccccchhHHHhcCcCCCCEEEE--ECCCCcE
Confidence 999987667777776656 999999999999999 9999944
No 10
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.86 E-value=2.1e-21 Score=140.16 Aligned_cols=118 Identities=21% Similarity=0.278 Sum_probs=100.4
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYL 99 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~ 99 (190)
.+...|+|++.+.+|....++.+ ++++++|+||++||++|+.+.|.|+++++++.++ ++.+++|++|.+.+.+++|+
T Consensus 5 ~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 5 TGSVAPAITGIDLKGNSVSLNDF-KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp TTEECCCCEEECSSSCEEESGGG-TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHHHHH
T ss_pred CCCcCCCceeEcCCCCEEeHHHc-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHH
Confidence 34457788888888877777776 7899999999999999999999999999999875 49999999999899999999
Q ss_pred hCCCCCcccCCchh---HHHHHHHcCCCCCCeeeeeeecCCCceEEEcc
Q psy8729 100 SGMPWPAIPYASET---RQSLASLYNVHGIPSLILLAVEAGGRLDVITT 145 (190)
Q Consensus 100 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~ 145 (190)
++++. .++...|. ...+.+.|++.++|++++ +|++| +++..
T Consensus 82 ~~~~~-~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~~ 125 (152)
T 2lrn_A 82 EEDKS-YWNQVLLQKDDVKDVLESYCIVGFPHIIL--VDPEG--KIVAK 125 (152)
T ss_dssp HHHTC-CSEEEEECHHHHHHHHHHTTCCSSCEEEE--ECTTS--EEEEE
T ss_pred HHhCC-CCeEEecccchhHHHHHHhCCCcCCeEEE--ECCCC--eEEEe
Confidence 98775 35555555 688999999999999999 99999 55543
No 11
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=2.1e-21 Score=139.87 Aligned_cols=116 Identities=18% Similarity=0.239 Sum_probs=98.5
Q ss_pred CCCCcccceeccCCCccceeee--eccCCcEEEEEEEcCCChh--hhhhhHHHHHHHHHH-hhcCCcEEEEEeeCCCCHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLS--YIESCQVIGLYFSAHWCPP--CKAFTPQLIETYRKL-KEDGYQFEIIFVSSDRSES 93 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~--~~~~~k~vlv~F~a~wC~~--C~~~~~~l~~l~~~~-~~~g~~~~ii~i~~d~~~~ 93 (190)
..+...|+|.+.+.+|....++ .+ +|++++|+||++||++ |+.++|.|++++++| ++. ++.+++|++|.+.+
T Consensus 6 ~~G~~~p~f~l~~~~g~~~~l~~~~~-~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~ 82 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGEKITRSSDAF-KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDVDKQ 82 (150)
T ss_dssp STTSBCCCCCEEBTTCCEECTTSTTT-TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCSCHH
T ss_pred cCCCcCCccEeECCCCCEEecchhhh-CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCCCHH
Confidence 3456778888988888777776 65 7899999999999999 999999999999999 554 59999999999999
Q ss_pred HHHHHHhCCCCCcccCCchh---HHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 94 SYQSYLSGMPWPAIPYASET---RQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.+++|+++++. .++...|. ...+.+.|++.++|++++ +|++|++
T Consensus 83 ~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G~i 129 (150)
T 3fw2_A 83 QWKDAIKRDTL-DWEQVCDFGGLNSEVAKQYSIYKIPANIL--LSSDGKI 129 (150)
T ss_dssp HHHHHHHHTTC-CSEEECCSCGGGCHHHHHTTCCSSSEEEE--ECTTSBE
T ss_pred HHHHHHHHhCC-CceEEEcCcccchHHHHHcCCCccCeEEE--ECCCCEE
Confidence 99999998875 34444443 679999999999999999 9999944
No 12
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.86 E-value=2.3e-21 Score=138.51 Aligned_cols=116 Identities=17% Similarity=0.268 Sum_probs=97.5
Q ss_pred CCCCcccceeccCCCccceeee--eccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHH-hhcCCcEEEEEeeCCCCHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLS--YIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKL-KEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~--~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~-~~~g~~~~ii~i~~d~~~~~~ 95 (190)
..+...|+|.+.+.++....++ .+ ++++++|+||++||++|+.++|.|.++++++ .+. ++.+++|++|.+.+.+
T Consensus 6 ~~g~~~p~~~l~~~~g~~~~l~~~~~-~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~ 82 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGEKLSRSAERF-RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDREAW 82 (148)
T ss_dssp CTTSBCCCCCEEBTTSCEECTTSTTT-TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCHHHH
T ss_pred cCCCcCCCeEeeCCCCCEEecccccc-CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCHHHH
Confidence 3455678888888877766666 55 7899999999999999999999999999999 654 5999999999999999
Q ss_pred HHHHhCCCCCcccCCchh---HHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 96 QSYLSGMPWPAIPYASET---RQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++|++++++ .++...+. ...+.+.|++.++|++++ +|++|++
T Consensus 83 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G~i 127 (148)
T 3fkf_A 83 ETAIKKDTL-SWDQVCDFTGLSSETAKQYAILTLPTNIL--LSPTGKI 127 (148)
T ss_dssp HHHHHHTTC-CSEEECCSCGGGCHHHHHTTCCSSSEEEE--ECTTSBE
T ss_pred HHHHHHcCC-CceEEEccCCcchHHHHhcCCCCcCEEEE--ECCCCeE
Confidence 999998875 34444444 679999999999999999 9999944
No 13
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.85 E-value=9.3e-21 Score=136.34 Aligned_cols=115 Identities=25% Similarity=0.468 Sum_probs=100.0
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
..+...|+|.+.+ ++....++.+ ++++++|+||++||++|+...|.|.++++++++.| +.+++|++|.+.+.++.|
T Consensus 4 ~~G~~~P~f~l~~-~g~~~~l~~~-~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 4 DKGDKAPDFALPG-KTGVVKLSDK-TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CTTSBCCCCEEEB-SSSEEEGGGG-TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSHHHHHHH
T ss_pred CCCCcCCceEeeC-CCCeEeHHHh-CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCCHHHHHHH
Confidence 3455678888888 6666666665 78999999999999999999999999999998764 999999999999999999
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++++++ .+++..|....+.+.|++.++|++++ +|++|++
T Consensus 80 ~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 118 (152)
T 3gl3_A 80 LAQVPA-EFTVAFDPKGQTPRLYGVKGMPTSFL--IDRNGKV 118 (152)
T ss_dssp HHHSCC-CSEEEECTTCHHHHHTTCCSSSEEEE--ECTTSBE
T ss_pred HHHcCC-CCceeECCcchhHHHcCCCCCCeEEE--ECCCCCE
Confidence 999886 56677777889999999999999999 9999954
No 14
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.85 E-value=5.9e-21 Score=137.45 Aligned_cols=114 Identities=22% Similarity=0.426 Sum_probs=99.6
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHh
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLS 100 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~ 100 (190)
+...|+|.+.+.++....++.+ ++++++|+||++||++|+.+.|.|+++++++.+. ++.++.|++|.+.+.++.|++
T Consensus 3 G~~~p~~~l~~~~g~~~~l~~~-~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 3 GSDAPNFVLEDTNGKRIELSDL-KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ--GVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp CEECCCCEEECTTCCEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEEESCCHHHHHHHHH
T ss_pred CCcCCcceeEcCCCCEEEHHHc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHH
Confidence 3456788888888777777666 7899999999999999999999999999999875 499999999988999999999
Q ss_pred CCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 101 GMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++++ .+++..|.+..+.+.|++.++|++++ +|++|++
T Consensus 80 ~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 116 (151)
T 2f9s_A 80 SYGV-NFPVVLDTDRQVLDAYDVSPLPTTFL--INPEGKV 116 (151)
T ss_dssp HHTC-CSCEEEETTSHHHHHTTCCSSCEEEE--ECTTSEE
T ss_pred HcCC-CceEEECCchHHHHhcCCCCCCeEEE--ECCCCcE
Confidence 8886 46777777789999999999999999 9999944
No 15
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.85 E-value=3.6e-21 Score=139.46 Aligned_cols=114 Identities=20% Similarity=0.345 Sum_probs=93.4
Q ss_pred CCcccceeccC--CCccceeeeeccCCcEEEEEEEcCCChhhhhh-hHHHHHHHHHHhhcCCcEEEEEeeCC------CC
Q psy8729 21 AKKTYNIGLAE--GTVTTKVLSYIESCQVIGLYFSAHWCPPCKAF-TPQLIETYRKLKEDGYQFEIIFVSSD------RS 91 (190)
Q Consensus 21 ~~~~~~~~l~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~-~~~l~~l~~~~~~~g~~~~ii~i~~d------~~ 91 (190)
+...|+|++.+ .++....++.+ +|++++|+||++||++|+.+ +|.|++++++|+++ ++.+++|++| ++
T Consensus 3 g~~aP~f~l~~~~~~g~~~~l~~~-~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 3 AMKAPELQIQQWFNSATDLTLADL-RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CEECCCCCEEEEESCSSCCCTGGG-TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSC
T ss_pred CCcCCCceehhhhcCCCccCHHHh-CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCC
Confidence 44567787776 34555556665 79999999999999999996 99999999999865 4999999984 57
Q ss_pred HHHHHHHHhCCCCCcccCCchhHH-----HHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 92 ESSYQSYLSGMPWPAIPYASETRQ-----SLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.+.++.|++++++. ++...|... .+.+.|++.++|++++ +|++|++
T Consensus 80 ~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~v~~~P~~~l--id~~G~i 130 (158)
T 3eyt_A 80 PISLKAFLHEYRIK-FPVGVDQPGDGAMPRTMAAYQMRGTPSLLL--IDKAGDL 130 (158)
T ss_dssp HHHHHHHHHHTTCC-SCEEEECCCSSSSCHHHHHTTCCSSSEEEE--ECTTSEE
T ss_pred HHHHHHHHHHcCCC-ceEEEcCccchhhHHHHHHcCCCCCCEEEE--ECCCCCE
Confidence 88999999998864 555555544 6899999999999999 9999944
No 16
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=8.5e-21 Score=138.59 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=100.9
Q ss_pred CCCcccceeccCCCccceeeeeccCCcE-EEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQV-IGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~-vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
.+...|+|.+.+.+|....++.+ .|++ ++|+|| ++||++|+..+|.|++++++|+++ ++.+++|+.| +.+.+++
T Consensus 4 ~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d-~~~~~~~ 79 (161)
T 3drn_A 4 VGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSD-DINSHKR 79 (161)
T ss_dssp TTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESC-CHHHHHH
T ss_pred CCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCC-CHHHHHH
Confidence 34567888888888877777776 6676 999999 999999999999999999999876 4999999998 6889999
Q ss_pred HHhCCCCCcccCCchhHHHHHHHcCCCC----CCeeeeeeecCCCceEEE
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLYNVHG----IPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~----~P~~~l~~id~~g~~~i~ 143 (190)
|++++++. +++..|.+..+.+.|++.+ +|++++ ||++|++...
T Consensus 80 ~~~~~~~~-~~~~~d~~~~~~~~~~v~~~~~~~P~~~l--id~~G~i~~~ 126 (161)
T 3drn_A 80 FKEKYKLP-FILVSDPDKKIRELYGAKGFILPARITFV--IDKKGIIRHI 126 (161)
T ss_dssp HHHHTTCC-SEEEECTTSHHHHHTTCCCSSSCCCEEEE--ECTTSBEEEE
T ss_pred HHHHhCCC-ceEEECCcHHHHHHcCCCCcCcccceEEE--ECCCCEEEEE
Confidence 99999864 7777888889999999999 999999 9999955333
No 17
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=6.4e-21 Score=137.17 Aligned_cols=117 Identities=21% Similarity=0.400 Sum_probs=100.6
Q ss_pred CCccc-ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHH
Q psy8729 21 AKKTY-NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYL 99 (190)
Q Consensus 21 ~~~~~-~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~ 99 (190)
+...| +|.+.+.++....++.+ .+++++|+||++||++|+...|.|+++++++++. ++.+++|++|.+.+.+++|+
T Consensus 6 G~~~p~~f~l~~~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 6 GNPSAASFSYPDINGKTVSLADL-KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TCCCSSSCEEEETTTEEEESTTT-TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHH
T ss_pred CCCCCcccEeecCCCCEeeHHHc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHH
Confidence 44566 88888887777666665 7899999999999999999999999999998764 59999999999889999999
Q ss_pred hCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 100 SGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
+++++...++..+....+.+.|++.++|++++ +|++| +++.
T Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G--~i~~ 123 (152)
T 2lja_A 83 TKDQLKGIQLHMGTDRTFMDAYLINGIPRFIL--LDRDG--KIIS 123 (152)
T ss_dssp HHHTCCSEEEECSSCTHHHHHTTCCSSCCEEE--ECTTS--CEEE
T ss_pred HhcCCCCceeecCcchhHHHHcCcCCCCEEEE--ECCCC--eEEE
Confidence 98887766777777789999999999999999 99999 4444
No 18
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.84 E-value=5.3e-21 Score=138.76 Aligned_cols=115 Identities=19% Similarity=0.313 Sum_probs=95.0
Q ss_pred CCcccceeccC-CCccceeeeeccCCcEEEEEEEcCCChhhhhh-hHHHHHHHHHHhhcCCcEEEEEeeCC------CCH
Q psy8729 21 AKKTYNIGLAE-GTVTTKVLSYIESCQVIGLYFSAHWCPPCKAF-TPQLIETYRKLKEDGYQFEIIFVSSD------RSE 92 (190)
Q Consensus 21 ~~~~~~~~l~~-~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~-~~~l~~l~~~~~~~g~~~~ii~i~~d------~~~ 92 (190)
+.+.|+|.+.+ .+|....++.+ +|++++|+||++||++|+.+ +|.|++++++|+++ ++.+++|+++ ++.
T Consensus 6 g~~~p~~~~~~~~~g~~~~l~~~-~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~ 82 (160)
T 3lor_A 6 NAPLLELDVQEWVNHEGLSNEDL-RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTP 82 (160)
T ss_dssp TCCBCCCCEEEESSSCCCCHHHH-TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCH
T ss_pred CCcCCCcccccccCCCccCHHHh-CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCH
Confidence 45677888776 55555556665 79999999999999999995 99999999999876 4999999984 678
Q ss_pred HHHHHHHhCCCCCcccCCchhHHH------HHHHcCCCCCCeeeeeeecCCCceE
Q psy8729 93 SSYQSYLSGMPWPAIPYASETRQS------LASLYNVHGIPSLILLAVEAGGRLD 141 (190)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~P~~~l~~id~~g~~~ 141 (190)
+.++.|++++++. ++...|.... +.+.|++.++|++++ +|++|++.
T Consensus 83 ~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~l--id~~G~i~ 134 (160)
T 3lor_A 83 EALKVFIDEFGIK-FPVAVDMPREGQRIPSTMKKYRLEGTPSIIL--ADRKGRIR 134 (160)
T ss_dssp HHHHHHHHHTTCC-SCEEEECCCTTCSSCHHHHHTTCCSSSEEEE--ECTTSBEE
T ss_pred HHHHHHHHHcCCC-CcEEECCccccchhhhHHHhcccCccceEEE--ECCCCcEE
Confidence 9999999998864 5666665555 999999999999999 99999543
No 19
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.75 E-value=9.3e-23 Score=145.32 Aligned_cols=124 Identities=40% Similarity=0.766 Sum_probs=103.2
Q ss_pred cccceeccCCCccceeeee-ccCCc-EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHh
Q psy8729 23 KTYNIGLAEGTVTTKVLSY-IESCQ-VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLS 100 (190)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~-~~~~k-~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~ 100 (190)
..|++++.+.+|....++. + +++ +++|+||++||++|+.+.|.|+++++++++.+.++.+++|++|.+.+.+++|++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~-~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 3 FIQGIKLVKKNRCEVNANEAL-KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 3577888887777666666 5 677 999999999999999999999999999965444699999999988889999999
Q ss_pred CCC--CCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEcccccccc
Q psy8729 101 GMP--WPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVITTEARHEL 151 (190)
Q Consensus 101 ~~~--~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~~~~~~~ 151 (190)
+++ |..+++..+....+.+.|++.++|++++ +|++| +++...+..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l--id~~G--~i~~~~~~~~~ 130 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGITGIPALVI--VKKDG--TLISMNGRGEV 130 (143)
Confidence 875 5667777777788999999999999999 99999 77776665433
No 20
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.84 E-value=1.6e-20 Score=131.88 Aligned_cols=111 Identities=22% Similarity=0.411 Sum_probs=96.4
Q ss_pred ccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEee-----CCCCHHHHHHH
Q psy8729 24 TYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVS-----SDRSESSYQSY 98 (190)
Q Consensus 24 ~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~-----~d~~~~~~~~~ 98 (190)
.|+|.+.+.++....++.+ ++++++|+||++||++|+...+.++++++++.. ++.++.|. .+.+.+.+++|
T Consensus 2 ~p~f~l~~~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 2 VADFELMGVDGKTYRLSDY-KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCEEEBTTSCEEEGGGG-TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCcceeECCCCCEEEHHHh-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHH
Confidence 5778888888777777666 789999999999999999999999999988543 48888883 45678999999
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.+++++..+++..+.+..+.+.|++.++|++++ +|++|++
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 117 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAF--IDKEGKL 117 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEE--ECTTCCE
T ss_pred HhhcCCCCeeEEECcchHHHHHcCcccCCeEEE--ECCCCcE
Confidence 999998788888888889999999999999999 9999954
No 21
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.84 E-value=1.1e-20 Score=132.80 Aligned_cols=113 Identities=15% Similarity=0.229 Sum_probs=99.0
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHh
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLS 100 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~ 100 (190)
+...|++.+.+.++....+..+ ++++++|+||++||++|+...|.|++++++++ ++.++.|+.|.+.+.+++|++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~ 76 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVN 76 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHH
Confidence 3457888888888776666665 78999999999999999999999999999886 388999999999999999999
Q ss_pred CCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 101 GMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++++..++...+....+.+.|++.++|++++ +|++|++
T Consensus 77 ~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~--id~~g~i 114 (136)
T 1zzo_A 77 KYPVKTFTQLADTDGSVWANFGVTQQPAYAF--VDPHGNV 114 (136)
T ss_dssp HTTCTTSEEEECTTCHHHHHTTCCSSSEEEE--ECTTCCE
T ss_pred HcCCCceEEEEcCCcHHHHHcCCCCCceEEE--ECCCCCE
Confidence 9987677777777889999999999999999 9999954
No 22
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.84 E-value=1.6e-20 Score=133.62 Aligned_cols=115 Identities=19% Similarity=0.336 Sum_probs=98.6
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC---CHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR---SESSY 95 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~---~~~~~ 95 (190)
..+...|++.+.+.++....++. ++++++|+||++||++|+.+.|.|++++++++.. ++.++.|++|. +.+.+
T Consensus 10 ~~g~~~p~~~l~~~~g~~~~l~~--~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~ 85 (145)
T 3erw_A 10 KQPAVPAVFLMKTIEGEDISIPN--KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVV 85 (145)
T ss_dssp --CCSCCEEEEECTTSCEEEESC--TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHH
T ss_pred cCCCcCCCceeecCCCCEEeHHH--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcCCHHHH
Confidence 34556788999988877666666 7999999999999999999999999999998754 49999999975 88999
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
+.|.+++++ .+++..+....+.+.|++.++|++++ +|++|++
T Consensus 86 ~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 127 (145)
T 3erw_A 86 EDFIKANKL-TFPIVLDSKGELMKEYHIITIPTSFL--LNEKGEI 127 (145)
T ss_dssp HHHHHHTTC-CSCEEECSSSHHHHHTTCCEESEEEE--ECTTCCE
T ss_pred HHHHHHcCC-ceeEEEcCchhHHHhcCcCccCeEEE--EcCCCcE
Confidence 999998876 46777777889999999999999999 9999954
No 23
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.84 E-value=3e-20 Score=133.91 Aligned_cols=115 Identities=20% Similarity=0.451 Sum_probs=100.2
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCC-HHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRS-ESSYQSY 98 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~-~~~~~~~ 98 (190)
.+.+.|+|.+.+.++....++.+ ++++++|+||++||++|+..+|.|+++++++++. ++.+++|+.|.+ .+.++.|
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~~~-~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 4 EENPAPDFTLNTLNGEVVKLSDL-KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK--PFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS--SEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCeEEEcCCCCEEehhhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEEcCCcchHHHHHH
Confidence 35567889998888877777666 7899999999999999999999999999999875 599999999977 7889999
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++++++ .+++..|.+..+.+.|++.++|++++ +|++|++
T Consensus 81 ~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 119 (154)
T 3kcm_A 81 FRKTGF-TLPVLLDADKRVGKLYGTTGVPETFV--IDRHGVI 119 (154)
T ss_dssp HHHHCC-CCCEEECTTCHHHHHHTCCSBCEEEE--ECTTSBE
T ss_pred HHHcCC-CeeEEecCchHHHHHhCCCCCCeEEE--ECCCCcE
Confidence 998875 46777777889999999999999999 9999954
No 24
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.83 E-value=1.2e-20 Score=144.69 Aligned_cols=121 Identities=12% Similarity=0.203 Sum_probs=104.0
Q ss_pred CCCCCCcccceeccCCCccceeeeeccCCc-EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC------
Q psy8729 17 GSKGAKKTYNIGLAEGTVTTKVLSYIESCQ-VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD------ 89 (190)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k-~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d------ 89 (190)
....+...|+|++.+.+|....++.+ .++ ++||+||++||++|+.++|.|++++++|+++ ++.+++|++|
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQAFP 107 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTTCG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccccc
Confidence 34456678999999988887777776 566 6999999999999999999999999999876 4999999996
Q ss_pred -CCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEcc
Q psy8729 90 -RSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVITT 145 (190)
Q Consensus 90 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~ 145 (190)
++.+.+++|++++++ .+++..|....+.+.|++.++|++++ ||++| ++++.
T Consensus 108 ~d~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~~v~~~P~~~l--iD~~G--~i~~~ 159 (218)
T 3u5r_E 108 EETLERVGAEVKAYGY-GFPYLKDASQSVAKAYGAACTPDFFL--YDRER--RLVYH 159 (218)
T ss_dssp GGSHHHHHHHHHHHTC-CSCEEECTTCHHHHHHTCCEESEEEE--ECTTC--BEEEE
T ss_pred cCCHHHHHHHHHHhCC-CccEEECCccHHHHHcCCCCCCeEEE--ECCCC--cEEEe
Confidence 678899999998885 67777788889999999999999999 99999 55543
No 25
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.83 E-value=7.5e-20 Score=133.16 Aligned_cols=116 Identities=16% Similarity=0.348 Sum_probs=97.4
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
...+...|+|.+.+.++....++.+ +++++||+||++||++|+.+.|.|+++++++++. ++.++.|++|.+.+.+++
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~-~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASL-KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGG-TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHHHHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHc-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHH
Confidence 3445677889998888777777666 7899999999999999999999999999999875 499999999999999999
Q ss_pred HHhCCCCCcccCCchhHHHHHHHc------CCCCCCeeeeeeecCCCce
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLY------NVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~P~~~l~~id~~g~~ 140 (190)
|++++++ .++...+.. .+.+.| ++.++|++++ +|++|++
T Consensus 85 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~l--id~~G~i 129 (165)
T 3or5_A 85 YMKTQGI-IYPVMMATP-ELIRAFNGYIDGGITGIPTSFV--IDASGNV 129 (165)
T ss_dssp HHHHHTC-CSCEEECCH-HHHHHHHTTSTTCSCSSSEEEE--ECTTSBE
T ss_pred HHHHcCC-CCceEecCH-HHHHHHhhhhccCCCCCCeEEE--ECCCCcE
Confidence 9998875 345554544 777777 8999999999 9999954
No 26
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.83 E-value=1.1e-20 Score=138.15 Aligned_cols=113 Identities=18% Similarity=0.357 Sum_probs=99.0
Q ss_pred CcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC------------
Q psy8729 22 KKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD------------ 89 (190)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d------------ 89 (190)
...|+|.+.+.++....++.+ +++++||+||++||++|+.++|.|.+++++++ ++.++.|++|
T Consensus 15 ~~~p~~~l~~~~g~~~~l~~~-~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~ 89 (165)
T 3ha9_A 15 EREASFSLTTIDGEVISLNNV-GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNK 89 (165)
T ss_dssp HHHHCCCEEBTTSCEECGGGC-CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCS
T ss_pred CcCCCCEeecCCCCEeeHHHh-CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEeccccccccccccc
Confidence 356778888888777766665 78999999999999999999999999999986 3999999999
Q ss_pred ------CCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 90 ------RSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
.+.+.+++|++++++..+++..+ +..+.+.|++.++|++++ +|++| +++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~l--id~~G--~i~~ 145 (165)
T 3ha9_A 90 PGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVI--MDKSS--NVLY 145 (165)
T ss_dssp TTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEE--EETTC--CEEE
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEE--EcCCC--cEEE
Confidence 78999999999998767777777 889999999999999999 99999 4444
No 27
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.83 E-value=2.5e-20 Score=138.19 Aligned_cols=114 Identities=16% Similarity=0.208 Sum_probs=95.4
Q ss_pred CCCCcccceeccCCCc--cceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTV--TTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
..+...|+|++.+.++ ....++.+ .|++++|+||++||++|+.++|.|++++++ ++.+++|+++++.+.++
T Consensus 31 ~~G~~~P~f~l~~~~g~~~~~~l~~~-~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~ 103 (176)
T 3kh7_A 31 LIGKPFPAFDLPSVQDPARRLTEADL-KGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAI 103 (176)
T ss_dssp TTTSBCCCCEEEBSSCTTSEEEGGGG-CSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHH
T ss_pred ccCCcCCCcEecccCCCCceecHHHh-CCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHH
Confidence 3456778888888776 44445555 689999999999999999999999988775 28899999999999999
Q ss_pred HHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceE
Q psy8729 97 SYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLD 141 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~ 141 (190)
+|++++++....+..|.+..+.+.|++.++|++++ ||++|++.
T Consensus 104 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i~ 146 (176)
T 3kh7_A 104 KWLNELHNPYLLSISDADGTLGLDLGVYGAPETYL--IDKQGIIR 146 (176)
T ss_dssp HHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEE--ECTTCBEE
T ss_pred HHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEE--ECCCCeEE
Confidence 99999987555456677889999999999999999 99999543
No 28
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.83 E-value=2.2e-20 Score=131.57 Aligned_cols=111 Identities=16% Similarity=0.243 Sum_probs=96.7
Q ss_pred cccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCC
Q psy8729 23 KTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGM 102 (190)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~ 102 (190)
..|++.+.+.++....+..+ ++++++|.||++||++|+...|.+++++++++ ++.++.|+.+.+.+.+++|++++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~-~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASL-QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCeEeecCCCCeecHHHh-CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHc
Confidence 46788888887766666665 78999999999999999999999999999986 38899999998899999999988
Q ss_pred CCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceE
Q psy8729 103 PWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLD 141 (190)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~ 141 (190)
++ .++...|.+..+.+.|++.++|++++ +|++|++.
T Consensus 78 ~~-~~~~~~d~~~~~~~~~~i~~~P~~~l--id~~G~i~ 113 (136)
T 1lu4_A 78 NL-NFTNLNDADGVIWARYNVPWQPAFVF--YRADGTST 113 (136)
T ss_dssp TC-CSEEEECTTSHHHHHTTCCSSSEEEE--ECTTSCEE
T ss_pred CC-CceEEECCchhHHHhcCCCCCCEEEE--ECCCCcEE
Confidence 86 56677777889999999999999999 99999553
No 29
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.83 E-value=6e-20 Score=136.72 Aligned_cols=115 Identities=21% Similarity=0.371 Sum_probs=100.1
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCC-HHHHHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRS-ESSYQSYL 99 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~-~~~~~~~~ 99 (190)
+...|+|.+.+.+|....++.+ +|++++|+||++||++|+.++|.|+++++++++. ++.+++|++|.+ .+.++.|.
T Consensus 37 g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~ 113 (186)
T 1jfu_A 37 PLKLPDLAFEDADGKPKKLSDF-RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKPKTFL 113 (186)
T ss_dssp CCBCCCCEEECTTSCEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHHHHHH
T ss_pred CCcCCCcEeEcCCCCEeeHHHc-CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHHHHHH
Confidence 5567889999888877777776 7999999999999999999999999999999754 599999999864 57889999
Q ss_pred hCCCCCcccCCchhHHHHHHHcCCC----CCCeeeeeeecCCCce
Q psy8729 100 SGMPWPAIPYASETRQSLASLYNVH----GIPSLILLAVEAGGRL 140 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~v~----~~P~~~l~~id~~g~~ 140 (190)
++++...+++..|....+.+.|++. ++|++++ ||++|++
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~l--id~~G~i 156 (186)
T 1jfu_A 114 KEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVL--VDPQGCE 156 (186)
T ss_dssp HHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEE--ECTTSBE
T ss_pred HHcCCCCCceEECCcchHHHHhccccccCCCCEEEE--ECCCCCE
Confidence 9998777888888888899999885 8999999 9999954
No 30
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.83 E-value=5.4e-20 Score=136.73 Aligned_cols=117 Identities=20% Similarity=0.225 Sum_probs=97.9
Q ss_pred CCcccceeccCC--CccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCC----cEEEEEeeCCC-CHH
Q psy8729 21 AKKTYNIGLAEG--TVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGY----QFEIIFVSSDR-SES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~--~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~----~~~ii~i~~d~-~~~ 93 (190)
+.+.|+|.+.+. ++....++.+ +++++||+||++||++|+.++|.|++++++|+++|. ++.+++|+.|. +.+
T Consensus 34 g~~~p~f~l~~~~~~g~~~~l~~~-~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~ 112 (183)
T 3lwa_A 34 RQQLPDIGGDSLMEEGTQINLSDF-ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD 112 (183)
T ss_dssp CCCCCCCEEEBSSSTTCEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHH
T ss_pred CCCCCceeccccccCCcEecHHHh-CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH
Confidence 456788988888 7777777776 789999999999999999999999999999988641 23999999998 789
Q ss_pred HHHHHHhCCCCCcccCCchhHHHHHHHc---CCCCCCeeeeeeecCCCceE
Q psy8729 94 SYQSYLSGMPWPAIPYASETRQSLASLY---NVHGIPSLILLAVEAGGRLD 141 (190)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~P~~~l~~id~~g~~~ 141 (190)
.+++|++++++ .+++..|....+.+.| ++.++|++++ ||++|++.
T Consensus 113 ~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G~i~ 160 (183)
T 3lwa_A 113 IAQDFVTDNGL-DYPSIYDPPFMTAASLGGVPASVIPTTIV--LDKQHRPA 160 (183)
T ss_dssp HHHHHHHHTTC-CSCEEECTTCGGGGGTTTCCTTCCSEEEE--ECTTSCEE
T ss_pred HHHHHHHHcCC-CccEEECCcchHHHHhccCCCCCCCeEEE--ECCCCcEE
Confidence 99999998885 3666667777777777 4889999999 99999553
No 31
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.82 E-value=4.4e-20 Score=137.80 Aligned_cols=120 Identities=13% Similarity=0.183 Sum_probs=101.4
Q ss_pred CCCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------
Q psy8729 17 GSKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD------- 89 (190)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d------- 89 (190)
....+...|+|++.+.++....++.+ .++++||+||++||++|+.++|.|++++++|.++ +.+++|+.|
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~ 81 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF-HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPE 81 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC-CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh-CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccc
Confidence 34455677889998888877777766 7899999999999999999999999999998753 999999986
Q ss_pred CCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEcc
Q psy8729 90 RSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVITT 145 (190)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~ 145 (190)
++.+.++.|++++++ .+++..|.+..+.+.|++.++|++++ +|++| +++..
T Consensus 82 d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G--~i~~~ 132 (188)
T 2cvb_A 82 DAPEKMAAFAEEHGI-FFPYLLDETQEVAKAYRALRTPEVFL--FDERR--LLRYH 132 (188)
T ss_dssp GSHHHHHHHHHHHTC-CSCEEECSSSHHHHHTTCCEESEEEE--ECTTC--BEEEE
T ss_pred cCHHHHHHHHHHhCC-CceEEECCcchHHHHcCCCCCCeEEE--ECCCC--cEEEE
Confidence 467889999998875 46777777889999999999999999 99999 55544
No 32
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.82 E-value=1.1e-19 Score=130.92 Aligned_cols=114 Identities=16% Similarity=0.290 Sum_probs=88.6
Q ss_pred cccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCC
Q psy8729 23 KTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGM 102 (190)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~ 102 (190)
+.+.+.+. .+|....++.+ +|++++|+||++||++|+.++|.|+++++++.+. ++.+++|++| +.+.++.|++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~-~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d-~~~~~~~~~~~~ 78 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL-KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG--SVDMVGIALD-TSDNIGNFLKQT 78 (151)
T ss_dssp ---CEEET-TTCCEECGGGC-CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--TEEEEEEESS-CHHHHHHHHHHS
T ss_pred Ccchhhcc-cCCCEecHHHh-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECC-ChHHHHHHHHHc
Confidence 35566554 44555555655 7999999999999999999999999999998654 5999999997 577899999988
Q ss_pred CCCcccCC---chhHHHHHHHcC--CCCCCeeeeeeecCCCceEEEc
Q psy8729 103 PWPAIPYA---SETRQSLASLYN--VHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 103 ~~~~~~~~---~~~~~~~~~~~~--v~~~P~~~l~~id~~g~~~i~~ 144 (190)
++ .+|.. .+....+.+.|+ +.++|++++ +|++|++....
T Consensus 79 ~~-~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l--id~~G~i~~~~ 122 (151)
T 3raz_A 79 PV-SYPIWRYTGANSRNFMKTYGNTVGVLPFTVV--EAPKCGYRQTI 122 (151)
T ss_dssp CC-SSCEEEECCSCHHHHHHTTTCCSCCSSEEEE--EETTTTEEEEC
T ss_pred CC-CCceEecCccchHHHHHHhCCccCCCCEEEE--ECCCCcEEEEE
Confidence 75 23333 334678999999 999999999 99999654333
No 33
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=6.1e-20 Score=133.37 Aligned_cols=118 Identities=15% Similarity=0.334 Sum_probs=98.5
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
...+...|+|.+.+.++....++.+ ++++++|+||++||++|+.++|.|+++++++++. ++.+++|+.|. .++.
T Consensus 15 ~~~G~~~p~f~l~~~~g~~~~l~~~-~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~---~~~~ 88 (158)
T 3hdc_A 15 VRTGALAPNFKLPTLSGENKSLAQY-RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEK---RFPE 88 (158)
T ss_dssp CCTTSBCCCCEEECTTSCEEESGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSS---SCCG
T ss_pred cCCCCcCCCceeEcCCCCEEehHHh-CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCH---HHHH
Confidence 3446678899999888877777766 7899999999999999999999999999999865 59999999886 4667
Q ss_pred HHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
|.+++++ .+++..|....+.+.|++.++|++++ +|++|++....
T Consensus 89 ~~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i~~~~ 132 (158)
T 3hdc_A 89 KYRRAPV-SFNFLSDATGQVQQRYGANRLPDTFI--VDRKGIIRQRV 132 (158)
T ss_dssp GGGGCCC-SCEEEECTTSHHHHHTTCCSSSEEEE--ECTTSBEEEEE
T ss_pred HHHHcCC-CceEEECchHHHHHHhCCCCcceEEE--EcCCCCEEEEE
Confidence 7777765 46777777889999999999999999 99999554333
No 34
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.82 E-value=1e-19 Score=130.96 Aligned_cols=114 Identities=18% Similarity=0.315 Sum_probs=97.0
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYL 99 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~ 99 (190)
+...|+|.+.+.++....+..+ ++++++|+||++||++|+...|.|+++++++++. ++.+++|+.+ ++.+.+++|+
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~ 81 (153)
T 2l5o_A 5 SKTAPAFSLPDLHGKTVSNADL-QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYV 81 (153)
T ss_dssp CTTCCSCEEECTTSCEEEHHHH-TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHH
T ss_pred CCCCCCcEeecCCCCCccHHHh-CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHH
Confidence 4457888888888777666665 7899999999999999999999999999999875 4899999976 4678899999
Q ss_pred hCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 100 SGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
+++++. ++...+....+.+.|++.++|++++ +|++|++
T Consensus 82 ~~~~~~-~~~~~d~~~~~~~~~~i~~~P~~~l--id~~G~i 119 (153)
T 2l5o_A 82 KDYGLP-FTVMYDADKAVGQAFGTQVYPTSVL--IGKKGEI 119 (153)
T ss_dssp HHTTCC-SEEEECSSCHHHHHHTCCSSSEEEE--ECSSSCC
T ss_pred HHcCCC-ceEEcCchHHHHHHcCCCccCeEEE--ECCCCcE
Confidence 988763 5666666788999999999999999 9999955
No 35
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.82 E-value=5.4e-20 Score=134.21 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=101.5
Q ss_pred CCCCccccee--ccCCCccceeeeeccCCcEEEEEEEc-CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 19 KGAKKTYNIG--LAEGTVTTKVLSYIESCQVIGLYFSA-HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 19 ~~~~~~~~~~--l~~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
..+...|+|. +.+.+|....++.+ .|++++|+||+ +||++|+..+|.|++++++|+++| +++++|+.| +.+.+
T Consensus 8 ~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d-~~~~~ 83 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRD-SVKSH 83 (163)
T ss_dssp CCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESS-CHHHH
T ss_pred ccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCC-CHHHH
Confidence 3455778888 88888877777776 78899999997 999999999999999999999864 899999998 78889
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCCC------------CCeeeeeeecCCCceEEEc
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVHG------------IPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------------~P~~~l~~id~~g~~~i~~ 144 (190)
+.|.+++++ .+++..|.+..+.+.||+.. +|++++ ||++|+++...
T Consensus 84 ~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~l--id~~G~i~~~~ 141 (163)
T 3gkn_A 84 DNFCAKQGF-AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFL--LSPEGQVVQAW 141 (163)
T ss_dssp HHHHHHHCC-SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEE--ECTTSCEEEEE
T ss_pred HHHHHHhCC-CceEEECCcHHHHHHhCCccccccccccccCcceEEEE--ECCCCeEEEEE
Confidence 999998875 57777888889999999987 999999 99999554333
No 36
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.81 E-value=8.4e-20 Score=130.23 Aligned_cols=112 Identities=15% Similarity=0.183 Sum_probs=91.9
Q ss_pred Ccccceec--cCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-----CHHH
Q psy8729 22 KKTYNIGL--AEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-----SESS 94 (190)
Q Consensus 22 ~~~~~~~l--~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-----~~~~ 94 (190)
...|+|.+ .+.++....++.+ ++++++|+||++||++|+...|.|++++++++++ +.++.|++|. +.+.
T Consensus 5 ~~~P~f~~~~~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~ 80 (148)
T 2b5x_A 5 QPMPELTGEKAWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGK 80 (148)
T ss_dssp CBCCCCCCCSEEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHH
T ss_pred CCCCCCccccccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHH
Confidence 34566665 4455555555554 7899999999999999999999999999998754 8899999875 6789
Q ss_pred HHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 95 YQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++.|++++++ .+++..+....+.+.|++.++|++++ +|++|++
T Consensus 81 ~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 123 (148)
T 2b5x_A 81 IKETAAEHDI-TQPIFVDSDHALTDAFENEYVPAYYV--FDKTGQL 123 (148)
T ss_dssp HHHHHHHTTC-CSCEEECSSCHHHHHTCCCCSSEEEE--ECTTCBE
T ss_pred HHHHHHHcCC-CcceEECCchhHHHHhCCCCCCEEEE--ECCCCcE
Confidence 9999999885 56666777789999999999999999 9999944
No 37
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.81 E-value=8.7e-21 Score=138.35 Aligned_cols=116 Identities=15% Similarity=0.204 Sum_probs=92.9
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
.+..+|+|+|.+.+|....++++ +||+++|.|| ++||++|+.++|.|+++++++.+. ++.+++|+.| +.+..++|
T Consensus 6 vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~--~~~~v~vs~d-~~~~~~~~ 81 (157)
T 4g2e_A 6 IGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV--NAVVLGISVD-PPFSNKAF 81 (157)
T ss_dssp TTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGC--SSEEEEEESS-CHHHHHHH
T ss_pred CCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhccccccccccc--CceEeeeccc-chhHHHHH
Confidence 35567889999988888888777 7899999999 999999999999999999999876 4889999987 67788999
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCC-----------CCCeeeeeeecCCCceEE
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVH-----------GIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~i 142 (190)
.+++++ .+|+..|.+..+.++||+. ..|++|+ ||++|+++.
T Consensus 82 ~~~~~~-~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tfl--ID~~G~I~~ 133 (157)
T 4g2e_A 82 KEHNKL-NFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFV--IDKEGKVRY 133 (157)
T ss_dssp HHHTTC-CSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEE--ECTTSBEEE
T ss_pred HHHcCC-cEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEE--ECCCCEEEE
Confidence 998886 5788888899999999974 4688999 999995543
No 38
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.81 E-value=1.1e-19 Score=133.17 Aligned_cols=113 Identities=17% Similarity=0.189 Sum_probs=92.6
Q ss_pred CCCcccceeccCC--CccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 20 GAKKTYNIGLAEG--TVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 20 ~~~~~~~~~l~~~--~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
.+...|+|++.+. ++....++.+.++++++|+||++||++|+.+.|.|++++++ ++.+++|+++++.+.+++
T Consensus 24 ~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~ 97 (168)
T 2b1k_A 24 IGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAIS 97 (168)
T ss_dssp TTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHH
T ss_pred cCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHH
Confidence 4556788888876 66665555545899999999999999999999999988765 378999999989999999
Q ss_pred HHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
|++++++.......|....+.+.|++.++|++++ +|++|++
T Consensus 98 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 138 (168)
T 2b1k_A 98 WLKELGNPYALSLFDGDGMLGLDLGVYGAPETFL--IDGNGII 138 (168)
T ss_dssp HHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEE--ECTTSBE
T ss_pred HHHHcCCCCceeeECcchHHHHHcCccccCEEEE--ECCCCeE
Confidence 9998875432234566788999999999999999 9999954
No 39
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.81 E-value=1.6e-19 Score=130.13 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=95.7
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC--CCCHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS--DRSESSYQ 96 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~--d~~~~~~~ 96 (190)
.++...|+|.+.+.++....++.+ + ++++|+||++||++|+...|.|+++++++ . +.+++|++ +++.+.++
T Consensus 6 ~~g~~~p~f~l~~~~g~~~~l~~~-~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~---v~~v~v~~d~~~~~~~~~ 78 (154)
T 3ia1_A 6 KPGEPLPDFLLLDPKGQPVTPATV-S-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G---VPFYVISREPRDTREVVL 78 (154)
T ss_dssp CSBEECCCCCEECTTSCEECTTTS-C-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C---CCEEEEECCTTCCHHHHH
T ss_pred CCCCcCCceEEECCCCCEechHHc-C-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C---CeEEEEeCCCcccHHHHH
Confidence 345567888888888777777766 4 89999999999999999999999999998 2 77888988 57889999
Q ss_pred HHHhCCCCCcccCCch---hHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 97 SYLSGMPWPAIPYASE---TRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.|++++++ .+++..+ ....+.+.|++.++|++++ +|++|++
T Consensus 79 ~~~~~~~~-~~~~~~d~~~~~~~~~~~~~v~~~P~~~l--id~~G~i 122 (154)
T 3ia1_A 79 EYMKTYPR-FIPLLASDRDRPHEVAARFKVLGQPWTFV--VDREGKV 122 (154)
T ss_dssp HHHTTCTT-EEECBCCSSCCHHHHHTTSSBCSSCEEEE--ECTTSEE
T ss_pred HHHHHcCC-CcccccccccchHHHHHHhCCCcccEEEE--ECCCCCE
Confidence 99999986 5666655 6889999999999999999 9999944
No 40
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.80 E-value=9.7e-20 Score=132.54 Aligned_cols=108 Identities=19% Similarity=0.350 Sum_probs=89.8
Q ss_pred eccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-----CCHHHHHHHHhCC
Q psy8729 28 GLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-----RSESSYQSYLSGM 102 (190)
Q Consensus 28 ~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-----~~~~~~~~~~~~~ 102 (190)
.+.+.++....+... ++++++|+||++||++|+.+.|.|++++++|+.. ++.+++|++| .+.+.+++|.+++
T Consensus 22 ~l~~~~g~~~~~~~~-~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYLK-KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGCC-TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC--CcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 455555554444444 7899999999999999999999999999998776 4889999975 3467899999988
Q ss_pred CCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 103 PWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++..+++..+....+++.|++.++|++++ +|++|++
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 134 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNISVYPSWAL--IGKDGDV 134 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTCCSSSEEEE--ECTTSCE
T ss_pred CCCcceEEEcCchHHHHHcCCCccceEEE--ECCCCcE
Confidence 87667777777889999999999999999 9999954
No 41
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.80 E-value=1.9e-19 Score=135.00 Aligned_cols=116 Identities=14% Similarity=0.226 Sum_probs=98.5
Q ss_pred CCCCcccceecc-CCCccceeeeeccCCc-EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------
Q psy8729 19 KGAKKTYNIGLA-EGTVTTKVLSYIESCQ-VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD------- 89 (190)
Q Consensus 19 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~k-~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d------- 89 (190)
..+...|+|.+. +.++....++.+ .++ ++||+||++||++|+.++|.|++++++|.++ ++.+++|++|
T Consensus 19 ~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 19 PLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGG
T ss_pred CcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccc
Confidence 345567889998 888877777776 566 6999999999999999999999999999876 4899999986
Q ss_pred CCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 90 RSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
++.+.++.|++++++ .+++..|.+..+.+.|++.++|++++ +|++|++
T Consensus 96 d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~P~~~l--id~~G~i 143 (196)
T 2ywi_A 96 DSPENMKKVAEELGY-PFPYLYDETQEVAKAYDAACTPDFYI--FDRDLKC 143 (196)
T ss_dssp GSHHHHHHHHHHHTC-CSCEEECSSCHHHHHHTCCEESEEEE--EETTCBE
T ss_pred cCHHHHHHHHHHcCC-CceEEECCchHHHHHhCCCCCCeEEE--EcCCCeE
Confidence 467889999998875 56666777788999999999999999 9999944
No 42
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.80 E-value=3.6e-19 Score=130.84 Aligned_cols=118 Identities=18% Similarity=0.192 Sum_probs=94.6
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCCh-hhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC---CCHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCP-PCKAFTPQLIETYRKLKEDGYQFEIIFVSSD---RSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~-~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d---~~~~~~ 95 (190)
.+...|+|++.+.+|....++.+ +|+++||+||++||+ +|+..++.|.++++++.+.+.++.+++|++| ++.+.+
T Consensus 9 ~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~ 87 (174)
T 1xzo_A 9 LNYEVEPFTFQNQDGKNVSLESL-KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQL 87 (174)
T ss_dssp CCEECCCCEEECTTSCEEETGGG-TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHH
T ss_pred cccccCCcEEEcCCCCEEehhhc-CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHH
Confidence 35567889999888877777776 789999999999999 9999999999999999987556999999998 467889
Q ss_pred HHHHhCCCCCc--ccCCchhHHHHHHH----------------cCCCCCCeeeeeeecCCCce
Q psy8729 96 QSYLSGMPWPA--IPYASETRQSLASL----------------YNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 96 ~~~~~~~~~~~--~~~~~~~~~~~~~~----------------~~v~~~P~~~l~~id~~g~~ 140 (190)
++|+++++... +++..+.+..+.+. |++..+|++++ ||++|++
T Consensus 88 ~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l--id~~G~i 148 (174)
T 1xzo_A 88 KKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYL--VGPDGKV 148 (174)
T ss_dssp HHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEE--ECTTSEE
T ss_pred HHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEE--ECCCCeE
Confidence 99999887532 25555544444433 34678999999 9999944
No 43
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.80 E-value=1.3e-18 Score=127.52 Aligned_cols=114 Identities=15% Similarity=0.235 Sum_probs=92.2
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChh-hhhhhHHHHHHHHHHhhc--CCcEEEEEeeCCC---CHHHHHHH
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPP-CKAFTPQLIETYRKLKED--GYQFEIIFVSSDR---SESSYQSY 98 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~-C~~~~~~l~~l~~~~~~~--g~~~~ii~i~~d~---~~~~~~~~ 98 (190)
|+|++.+.+|....++.+ .|+++||+||++||++ |+.++|.|+++++++.+. +.++++++|++|. +.+.++.|
T Consensus 7 p~f~l~~~~G~~~~l~~~-~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~ 85 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF-RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARY 85 (171)
T ss_dssp SCCEEEETTSCEEETTTT-TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh-CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHH
Confidence 678888877777777766 7899999999999998 999999999999999752 1369999999983 57889999
Q ss_pred HhCCCCCcccCC---chhHHHHHHHcCCCCCC---------------eeeeeeecCCCceEE
Q psy8729 99 LSGMPWPAIPYA---SETRQSLASLYNVHGIP---------------SLILLAVEAGGRLDV 142 (190)
Q Consensus 99 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~P---------------~~~l~~id~~g~~~i 142 (190)
+++++. .++.. .+....+.+.|++..+| ++++ ||++|++..
T Consensus 86 ~~~~~~-~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~l--id~~G~i~~ 144 (171)
T 2rli_A 86 VQDFHP-RLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL--LNPDGLFTD 144 (171)
T ss_dssp HHTTCT-TCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEE--ECTTSCEEE
T ss_pred HHHcCC-CeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEE--ECCCCeEEE
Confidence 998874 23333 23456889999999888 8999 999995533
No 44
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.79 E-value=2.4e-19 Score=130.25 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=98.6
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCc-EEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQ-VIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k-~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
...+...|+|.+.+.+|....++.+ .|+ +++|+|| ++||++|+.++|.|+++++++.+. ++.+++|+.| +.+.+
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d-~~~~~ 84 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGY-RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVG-PPPTH 84 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESC-CHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHh-cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCC-CHHHH
Confidence 3445677889998888877777776 666 9999998 999999999999999999998764 5999999997 57789
Q ss_pred HHHHhCCCCCcccCCchh--HHHHHHHcCCC----CCC--eeeeeeecCCCceE
Q psy8729 96 QSYLSGMPWPAIPYASET--RQSLASLYNVH----GIP--SLILLAVEAGGRLD 141 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~----~~P--~~~l~~id~~g~~~ 141 (190)
+.|.+++++ .+++..|. +..+.+.|++. ++| ++++ +|++|++.
T Consensus 85 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~l--id~~G~i~ 135 (160)
T 1xvw_A 85 KIWATQSGF-TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFV--VDRSGIIR 135 (160)
T ss_dssp HHHHHHHTC-CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEE--ECTTSBEE
T ss_pred HHHHHhcCC-CceEEecCCcChHHHHHcCCccccCCCeeeeEEE--ECCCCeEE
Confidence 999998886 56777774 78899999998 999 9999 99999553
No 45
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.79 E-value=9.5e-19 Score=127.25 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=93.7
Q ss_pred ccceeccCCCccceeeeeccCCcEEEEEEEcCCChh-hhhhhHHHHHHHHHHhhc-C-CcEEEEEeeCCC---CHHHHHH
Q psy8729 24 TYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPP-CKAFTPQLIETYRKLKED-G-YQFEIIFVSSDR---SESSYQS 97 (190)
Q Consensus 24 ~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~-C~~~~~~l~~l~~~~~~~-g-~~~~ii~i~~d~---~~~~~~~ 97 (190)
.|+|++.+.+|+...++.+ .|++++|+||++||++ |+..+|.|+++++++++. + .++++++|++|. +.+.+++
T Consensus 3 ap~f~l~~~~G~~~~l~~~-~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~ 81 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDY-LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIAN 81 (164)
T ss_dssp CCCCEEEETTSCEEEGGGG-TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHc-CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHH
Confidence 5678888888777777776 7899999999999998 999999999999999862 1 269999999985 4788999
Q ss_pred HHhCCCCCcccCC---chhHHHHHHHcCCCCCC---------------eeeeeeecCCCceE
Q psy8729 98 YLSGMPWPAIPYA---SETRQSLASLYNVHGIP---------------SLILLAVEAGGRLD 141 (190)
Q Consensus 98 ~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~P---------------~~~l~~id~~g~~~ 141 (190)
|+++++. .+++. .+....+.+.||+..+| ++++ ||++|++.
T Consensus 82 ~~~~~~~-~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~l--id~~G~i~ 140 (164)
T 2ggt_A 82 YVKEFSP-KLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL--IGPDGEFL 140 (164)
T ss_dssp HHHTTCS-SCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEE--ECTTSCEE
T ss_pred HHHHcCC-CeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEE--ECCCCeEE
Confidence 9998874 23333 45567899999999999 8999 99999553
No 46
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=6.6e-21 Score=138.43 Aligned_cols=115 Identities=18% Similarity=0.348 Sum_probs=96.6
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHH-HHHHHhhcCCcEEEEEeeCCCCHHHHHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIE-TYRKLKEDGYQFEIIFVSSDRSESSYQSYL 99 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~-l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~ 99 (190)
+...|+|.+.+.++....++.+ ++++++|+||++||++|+.++|.|++ +++++... .++.++.|++|.+.+.+++|.
T Consensus 10 g~~~p~f~l~~~~g~~~~l~~~-~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~ 87 (159)
T 2ls5_A 10 GEMAPDFTITLTDGKQVTLSSL-RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDN-ADFALIGIDRDEPLEKVLAFA 87 (159)
Confidence 4456788888887776666665 78999999999999999999999998 88888722 359999999998778899999
Q ss_pred hCCCCCcccCCchhHHHHHHHcC--CCCCCeeeeeeecCCCce
Q psy8729 100 SGMPWPAIPYASETRQSLASLYN--VHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~--v~~~P~~~l~~id~~g~~ 140 (190)
+++++ .+|+..|....+.+.|+ +.++|++++ +|++|++
T Consensus 88 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~P~~~l--id~~G~i 127 (159)
T 2ls5_A 88 KSTGV-TYPLGLDPGADIFAKYALRDAGITRNVL--IDREGKI 127 (159)
Confidence 98886 67888888889999999 566999999 9999943
No 47
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.78 E-value=2.2e-19 Score=134.27 Aligned_cols=115 Identities=15% Similarity=0.203 Sum_probs=89.1
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~~ 93 (190)
+...|+|++.+.+|+...++.+ +||++||+||++||++|+.++|.|++++++|+++ ++++++|++| ++.+
T Consensus 23 ~~~~p~f~l~d~~G~~~~l~~~-~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~ 99 (187)
T 3dwv_A 23 ASSIFDFEVLDADHKPYNLVQH-KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEE 99 (187)
T ss_dssp CCSGGGSCCBBTTSCBCCGGGG-TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTT
T ss_pred CCccCCeEEEcCCCCEeeHHHh-CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHH
Confidence 4567899999988887777776 7899999999999999999999999999999886 4999999987 3578
Q ss_pred HHHHHHhCC-CCCcccCCc--hh----HHHHH--------HHcCCCCCC---eeeeeeecCCCceE
Q psy8729 94 SYQSYLSGM-PWPAIPYAS--ET----RQSLA--------SLYNVHGIP---SLILLAVEAGGRLD 141 (190)
Q Consensus 94 ~~~~~~~~~-~~~~~~~~~--~~----~~~~~--------~~~~v~~~P---~~~l~~id~~g~~~ 141 (190)
++++|+++. +. .+|+.. |. ...+. ..+++..+| ++++ ||++|++.
T Consensus 100 ~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~l--iD~~G~i~ 162 (187)
T 3dwv_A 100 EIKEFVCTKFKA-EFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFL--IDRDGVPV 162 (187)
T ss_dssp HHHHSCCBCCCC-SSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEE--ECTTSCEE
T ss_pred HHHHHHHhccCC-CCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEE--ECCCCCEE
Confidence 899999843 53 334332 11 11121 345677788 9999 99999553
No 48
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.78 E-value=7.8e-19 Score=128.43 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=97.3
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEc-CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSA-HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
..+...|+|++.+.+|....++.+ +||+++|+||+ +||++|+.++|.|+++++++ . ++++++|+.| +.+.+++
T Consensus 17 ~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~--~v~vv~is~d-~~~~~~~ 90 (163)
T 1psq_A 17 QVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D--NTVVLTVSMD-LPFAQKR 90 (163)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T--TEEEEEEESS-CHHHHHH
T ss_pred CCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C--CcEEEEEECC-CHHHHHH
Confidence 345677889999888877777776 78999999995 99999999999999999888 3 4999999998 5677889
Q ss_pred HHhCCCCCcccCCch-hHHHHHHHcCCC----C--CCeeeeeeecCCCceEEEc
Q psy8729 98 YLSGMPWPAIPYASE-TRQSLASLYNVH----G--IPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~----~--~P~~~l~~id~~g~~~i~~ 144 (190)
|.+++++..+|+..| .+..+.+.||+. + .|++++ ||++|+++...
T Consensus 91 ~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~l--iD~~G~i~~~~ 142 (163)
T 1psq_A 91 WCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFV--LDTDNTIRYVE 142 (163)
T ss_dssp HHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEE--ECTTCBEEEEE
T ss_pred HHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEE--EcCCCeEEEEE
Confidence 999887535677777 678999999987 3 499999 99999554333
No 49
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.78 E-value=2.6e-20 Score=136.91 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=100.2
Q ss_pred CCCCCcccceeccCCCccceeeeec-cCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYI-ESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
...+.++|+|+|.+.+|....++++ .+||+++|.|| ++|||+|+.++|.|++++++|.+.| +.+++|+.| +.+.+
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~d-~~~~~ 81 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISVD-SPWCL 81 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEESS-CHHHH
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecCC-CHHHH
Confidence 3446678899999988877776654 47888888888 9999999999999999999998764 899999987 67889
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCC----------CCCeeeeeeecCCCceEEE
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVH----------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~P~~~l~~id~~g~~~i~ 143 (190)
++|.+++++ .+|+..|.+..+.+.||+. ..|++|+ ||++|+++..
T Consensus 82 ~~~~~~~~~-~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tfl--ID~~G~I~~~ 136 (164)
T 4gqc_A 82 KKFKDENRL-AFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFI--VKPDGTVAYK 136 (164)
T ss_dssp HHHHHHTTC-CSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEE--ECTTSBEEEE
T ss_pred HHHHHhcCc-ccceeecCchHHHHHcCCcccccccCcCCeeeEEEE--ECCCCEEEEE
Confidence 999998886 6888889999999999983 4789999 9999955433
No 50
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.78 E-value=1e-18 Score=127.83 Aligned_cols=114 Identities=14% Similarity=0.238 Sum_probs=94.1
Q ss_pred CCcccceecc--CCCc--cceeeee-ccCCcEEEEEEE-cCCChhhh-hhhHHHHHHHHHHhhcCCcEE-EEEeeCCCCH
Q psy8729 21 AKKTYNIGLA--EGTV--TTKVLSY-IESCQVIGLYFS-AHWCPPCK-AFTPQLIETYRKLKEDGYQFE-IIFVSSDRSE 92 (190)
Q Consensus 21 ~~~~~~~~l~--~~~~--~~~~~~~-~~~~k~vlv~F~-a~wC~~C~-~~~~~l~~l~~~~~~~g~~~~-ii~i~~d~~~ 92 (190)
+...|+|++. +.+| ....++. + +|++++|.|| ++||++|+ .++|.|+++++++.++ +++ +++|+.| +.
T Consensus 7 G~~aP~f~l~~~~~~G~~~~~~l~~~~-~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~--~v~~vv~Is~d-~~ 82 (162)
T 1tp9_A 7 GDVLPDGKLAYFDEQDQLQEVSVHSLV-AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK--GVTEILCISVN-DP 82 (162)
T ss_dssp TCBCCCCEEEEECTTSCEEEEESHHHH-TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCCEEEEESS-CH
T ss_pred CCCCCCeEEEeecCCCCceeEeHHHHh-CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEECC-CH
Confidence 4456677664 6666 5555655 4 7899999999 89999999 9999999999999876 488 9999987 57
Q ss_pred HHHHHHHhCCCCC-cccCCchhHHHHHHHcCCC------C-----CCeeeeeeecCCCceE
Q psy8729 93 SSYQSYLSGMPWP-AIPYASETRQSLASLYNVH------G-----IPSLILLAVEAGGRLD 141 (190)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~------~-----~P~~~l~~id~~g~~~ 141 (190)
+.+++|.++++.. .+|+..|.+..+.++||+. + +|++++ || +|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~v--id-~G~i~ 140 (162)
T 1tp9_A 83 FVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALL--VD-DLKVK 140 (162)
T ss_dssp HHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEE--EE-TTEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEE--EE-CCEEE
Confidence 7899999999864 4888888889999999986 2 899999 99 99443
No 51
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.78 E-value=7.7e-19 Score=135.02 Aligned_cols=119 Identities=17% Similarity=0.184 Sum_probs=96.7
Q ss_pred CCCcccceeccCC--Cc--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHH
Q psy8729 20 GAKKTYNIGLAEG--TV--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESS 94 (190)
Q Consensus 20 ~~~~~~~~~l~~~--~~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~ 94 (190)
.+...|+|++.+. +| ....++.+.+|+++||+|| ++||++|+.++|.|++++++|.++ ++++++|+.| +.+.
T Consensus 27 ~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~--~v~vv~Is~D-~~~~ 103 (221)
T 2c0d_A 27 VTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK--NVELLGISVD-SVYS 103 (221)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHH
T ss_pred CCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHH
Confidence 3456778888776 66 5566666536889999999 999999999999999999999876 4999999997 5667
Q ss_pred HHHHHhCC----C--CCcccCCchhHHHHHHHcCC-----CCCCeeeeeeecCCCceEEE
Q psy8729 95 YQSYLSGM----P--WPAIPYASETRQSLASLYNV-----HGIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 95 ~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v-----~~~P~~~l~~id~~g~~~i~ 143 (190)
.+.|.+++ + -..+|+..|.+..+.+.||+ ..+|++++ ||++|+++..
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~l--ID~~G~I~~~ 161 (221)
T 2c0d_A 104 HLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFI--IDKNGCVRHQ 161 (221)
T ss_dssp HHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEE--ECCCCeEEEE
Confidence 88999877 2 23677778888899999999 37999999 9999955443
No 52
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.78 E-value=5.6e-19 Score=131.90 Aligned_cols=115 Identities=11% Similarity=0.126 Sum_probs=95.8
Q ss_pred CCcccceeccCCCcc----ceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 21 AKKTYNIGLAEGTVT----TKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~----~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
+...|+|++.+.++. ...++.+ .|+++||+|| ++||++|+.++|.|++++++|.++ ++.+++|+.|. .+..
T Consensus 4 G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~-~~~~ 79 (187)
T 1we0_A 4 GTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDT-HFVH 79 (187)
T ss_dssp TCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHH
T ss_pred CCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHHH
Confidence 345678888776655 5556665 7899999999 999999999999999999999876 49999999985 6778
Q ss_pred HHHHhCC----CCCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEE
Q psy8729 96 QSYLSGM----PWPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 96 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i 142 (190)
+.|.+++ ++ .+++..|.+..+.+.|++. ++|++++ ||++|++..
T Consensus 80 ~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~l--id~~G~i~~ 133 (187)
T 1we0_A 80 KAWHENSPAVGSI-EYIMIGDPSQTISRQFDVLNEETGLADRGTFI--IDPDGVIQA 133 (187)
T ss_dssp HHHHHSCHHHHTC-CSEEEECTTCHHHHHTTCEETTTTEECEEEEE--ECTTSBEEE
T ss_pred HHHHHHhccccCC-CceEEECCchHHHHHhCCCcCCCCceeeEEEE--ECCCCeEEE
Confidence 9999988 43 5677777778999999998 8999999 999995533
No 53
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.78 E-value=3.2e-19 Score=132.72 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=88.2
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-------C
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-------S 91 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-------~ 91 (190)
..+...|+|++.+.+|....++.+ +|+++||+||++||++|+.++|.|++++++|+++ ++.+++|++|. +
T Consensus 24 ~~g~~~p~f~l~~~~G~~~~l~~~-~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 24 QQEQDFYDFKAVNIRGKLVSLEKY-RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ---CCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSC
T ss_pred CcCCccCceEeecCCCCEecHHHc-CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCC
Confidence 345567889998888877777776 7899999999999999999999999999999876 49999999874 6
Q ss_pred HHHHHHHHhC-CCCCcccCCc--hhHHHH---HHHcCCCCCC-------eeeeeeecCCCceE
Q psy8729 92 ESSYQSYLSG-MPWPAIPYAS--ETRQSL---ASLYNVHGIP-------SLILLAVEAGGRLD 141 (190)
Q Consensus 92 ~~~~~~~~~~-~~~~~~~~~~--~~~~~~---~~~~~v~~~P-------~~~l~~id~~g~~~ 141 (190)
.+.+++|+++ ++. .+|+.. |.+... .-.|++.++| ++++ ||++|++.
T Consensus 101 ~~~~~~~~~~~~~~-~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~l--id~~G~i~ 160 (181)
T 2p31_A 101 NKEIESFARRTYSV-SFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYL--VAPDGKVV 160 (181)
T ss_dssp HHHHHHHHHHHHCC-CSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEE--ECTTSCEE
T ss_pred HHHHHHHHHhhcCC-CceeEeecccCCccchhhhhhhhhcCCCccccceeEEE--EcCCCCEE
Confidence 7889999987 664 344442 111111 1134566788 9999 99999543
No 54
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.78 E-value=5e-19 Score=129.78 Aligned_cols=118 Identities=12% Similarity=0.046 Sum_probs=97.7
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
...+...|+|++.+.+|....++.+ +|+++||+|| ++||++|+.++|.|+++++++ . ++++++|+.| +.+.++
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~--~v~vv~Is~d-~~~~~~ 90 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S--NTIVLCISAD-LPFAQA 90 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T--TEEEEEEESS-CHHHHT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C--CCEEEEEeCC-CHHHHH
Confidence 3445567889999888877777776 7899999999 899999999999999999998 3 4999999997 567788
Q ss_pred HHHhCCCCCcccCCchh-HHHHHHHcCCCC---------CCeeeeeeecCCCceEEE
Q psy8729 97 SYLSGMPWPAIPYASET-RQSLASLYNVHG---------IPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~---------~P~~~l~~id~~g~~~i~ 143 (190)
+|.+++++..+++..|. +..+.+.||+.. .|++++ ||++|+++..
T Consensus 91 ~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~l--iD~~G~i~~~ 145 (165)
T 1q98_A 91 RFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIV--LDEQNNVLHS 145 (165)
T ss_dssp TCTTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEE--ECTTSBEEEE
T ss_pred HHHHHcCCCceEEeeccccchHHHHhCceecccccCCccceeEEE--EcCCCEEEEE
Confidence 99998886457877776 688999999853 599999 9999955433
No 55
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.78 E-value=9.6e-19 Score=128.88 Aligned_cols=116 Identities=7% Similarity=0.067 Sum_probs=96.3
Q ss_pred CCCcccceecc-CCCccceeeeeccCCcEEEEEEE-cCCChhhhh-hhHHHHHHHHHHhhcCCcE-EEEEeeCCCCHHHH
Q psy8729 20 GAKKTYNIGLA-EGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKA-FTPQLIETYRKLKEDGYQF-EIIFVSSDRSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~-~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~-~~~~l~~l~~~~~~~g~~~-~ii~i~~d~~~~~~ 95 (190)
.+...|+|++. +.++....++.+.+++++||.|| ++|||+|+. ++|.|+++++++.++| + ++++|+.| +.+.+
T Consensus 5 ~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d-~~~~~ 81 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACMAVN-DSFVM 81 (167)
T ss_dssp TTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEEESS-CHHHH
T ss_pred CCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCC-CHHHH
Confidence 34567888888 87777776666536778888876 999999999 9999999999998764 8 99999987 57789
Q ss_pred HHHHhCCCCC-cccCCchhHHHHHHHcCCCCC-----------CeeeeeeecCCCceE
Q psy8729 96 QSYLSGMPWP-AIPYASETRQSLASLYNVHGI-----------PSLILLAVEAGGRLD 141 (190)
Q Consensus 96 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~-----------P~~~l~~id~~g~~~ 141 (190)
++|.+++++. .+|+..|.+..+.+.||+... |++++ | ++|+++
T Consensus 82 ~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~l--I-~~G~I~ 136 (167)
T 2wfc_A 82 DAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLV--I-EDGVVT 136 (167)
T ss_dssp HHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEE--E-ETTEEE
T ss_pred HHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEE--E-eCCEEE
Confidence 9999998864 488889989999999998754 99999 9 999443
No 56
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.78 E-value=1.2e-18 Score=142.31 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=99.2
Q ss_pred CCCccccee-----ccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-----
Q psy8729 20 GAKKTYNIG-----LAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD----- 89 (190)
Q Consensus 20 ~~~~~~~~~-----l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d----- 89 (190)
.+...|+|. +.+.++....++.+ +++++||+||++||++|+.++|.|++++++|+++ ++.+++|++|
T Consensus 53 vG~~aPdF~~~~~wL~d~dG~~vsLsdl-~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~ 129 (352)
T 2hyx_A 53 SCGTAPDLKGITGWLNTPGNKPIDLKSL-RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFE 129 (352)
T ss_dssp CCCBCCCCCSCCEEESSGGGCCCCGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGG
T ss_pred CCCcCCCccccccccCCCCCCEEcHHHh-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCccccc
Confidence 355678888 77777766666665 7999999999999999999999999999999875 4999999976
Q ss_pred CCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEE
Q psy8729 90 RSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i 142 (190)
++.+.+++|++++++ .+|+..|.+..+.+.|++.++|++++ ||++|++..
T Consensus 130 d~~~~~~~~~~~~~l-~fpv~~D~~~~l~~~ygV~~~Pt~~l--ID~~G~Iv~ 179 (352)
T 2hyx_A 130 KVPGNVAKGAANLGI-SYPIALDNNYATWTNYRNRYWPAEYL--IDATGTVRH 179 (352)
T ss_dssp GCHHHHHHHHHHHTC-CSCEEECTTSHHHHHTTCCEESEEEE--ECTTSBEEE
T ss_pred CCHHHHHHHHHHcCC-CccEEeCCcHHHHHHcCCCccCEEEE--EeCCCeEEE
Confidence 467899999998875 46777777889999999999999999 999996533
No 57
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.78 E-value=4.5e-19 Score=127.84 Aligned_cols=113 Identities=16% Similarity=0.231 Sum_probs=91.5
Q ss_pred CCCcccceeccCCCc--------cceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCC
Q psy8729 20 GAKKTYNIGLAEGTV--------TTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRS 91 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~--------~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~ 91 (190)
.+...|+|.+.+.++ ....+..+ .+++++|+||++||++|+.+.|.|++++++ .++.++.|+.+.+
T Consensus 10 ~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~ 83 (156)
T 1kng_A 10 IGRPAPQTALPPLEGLQADNVQVPGLDPAAF-KGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDA 83 (156)
T ss_dssp --CBCCCCCBCCCTTCEETTEECCCBCGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCC
T ss_pred hCCCCCCceeeeccCcccccccCceechHHh-CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCC
Confidence 345677888887776 55555555 689999999999999999999999888765 2588999999999
Q ss_pred HHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 92 ESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.+.+++|++++++....+..+....+.+.|++.++|++++ +|++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~--id~~G~i 130 (156)
T 1kng_A 84 ADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFV--VGREGTI 130 (156)
T ss_dssp HHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEE--ECTTSBE
T ss_pred HHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEE--EcCCCCE
Confidence 9999999998875322255666788999999999999999 9999954
No 58
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.78 E-value=5.4e-19 Score=130.09 Aligned_cols=115 Identities=14% Similarity=0.189 Sum_probs=79.7
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~~ 93 (190)
+...|+|++.+.+|....++.+ +|+++||+||++||++|+ ++|.|+++++++.++ ++.+++|++| ++.+
T Consensus 9 ~~~~~~f~l~d~~G~~~~l~~~-~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQPFPFDQL-KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp -CGGGGCCCBBTTSCBCCGGGG-TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC--------
T ss_pred hhheeeeEEEcCCCCEecHHHc-CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHH
Confidence 3467889999888887777776 789999999999999999 999999999999876 4999999986 4567
Q ss_pred HHHHHH-hCCCCCcccCCchhH--H----H-----HHHHcCCCCCC------eeeeeeecCCCceEE
Q psy8729 94 SYQSYL-SGMPWPAIPYASETR--Q----S-----LASLYNVHGIP------SLILLAVEAGGRLDV 142 (190)
Q Consensus 94 ~~~~~~-~~~~~~~~~~~~~~~--~----~-----~~~~~~v~~~P------~~~l~~id~~g~~~i 142 (190)
.++.|+ ++++. .+|+..|.+ . . ..+.|++.++| ++++ ||++|++..
T Consensus 85 ~~~~~~~~~~~~-~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~l--id~~G~i~~ 148 (171)
T 3cmi_A 85 EIAQFCQLNYGV-TFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFL--VDKKGKVYE 148 (171)
T ss_dssp ----------CC-CSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEE--ECSSSCEEE
T ss_pred HHHHHHHhccCC-CceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEE--ECCCCCEEE
Confidence 888999 77764 344443211 0 1 12458999999 9999 999995533
No 59
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.78 E-value=1.1e-18 Score=134.13 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=96.1
Q ss_pred CCCCCcccceecc---CCCccceeeeeccCCcEEEEEEEc-CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHH
Q psy8729 18 SKGAKKTYNIGLA---EGTVTTKVLSYIESCQVIGLYFSA-HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSES 93 (190)
Q Consensus 18 ~~~~~~~~~~~l~---~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~ 93 (190)
...+...|+|++. ++++....++.+ +||++||+||+ +||++|+.++|.|++++++|.++ ++++++|++|. .+
T Consensus 40 l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~-~~ 115 (222)
T 3ztl_A 40 LLPNRPAPEFKGQAVINGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDS-QY 115 (222)
T ss_dssp CCSSEECCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HH
T ss_pred ccCCCCCCCeEEecccCCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HH
Confidence 3445567888887 555566777776 78999999996 99999999999999999999876 49999999974 56
Q ss_pred HHHHHHhCC------CCCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCce
Q psy8729 94 SYQSYLSGM------PWPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRL 140 (190)
Q Consensus 94 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~ 140 (190)
..+.|.+.+ ....+++..|.+..+.+.|++. .+|++++ ||++|++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~l--ID~~G~I 172 (222)
T 3ztl_A 116 SHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFI--IDPNGIL 172 (222)
T ss_dssp HHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEE--ECTTSEE
T ss_pred HHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEE--ECCCCeE
Confidence 677787765 1356777788888999999998 8999999 9999944
No 60
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.78 E-value=1e-18 Score=131.07 Aligned_cols=119 Identities=17% Similarity=0.166 Sum_probs=97.4
Q ss_pred CCcccceeccCC--Cc--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 21 AKKTYNIGLAEG--TV--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 21 ~~~~~~~~l~~~--~~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
+...|+|.+.+. +| ....++.+.+++++||+|| ++||++|+.++|.|++++++|.+. ++.+++|+.| +.+..
T Consensus 3 G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~Is~d-~~~~~ 79 (192)
T 2h01_A 3 QGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER--NVELLGCSVD-SKFTH 79 (192)
T ss_dssp SSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHH
T ss_pred CCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEEeC-CHHHH
Confidence 345678888776 66 5555665536889999999 999999999999999999999875 4999999998 57788
Q ss_pred HHHHhCC----C--CCcccCCchhHHHHHHHcCCC-----CCCeeeeeeecCCCceEEEc
Q psy8729 96 QSYLSGM----P--WPAIPYASETRQSLASLYNVH-----GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 96 ~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~-----~~P~~~l~~id~~g~~~i~~ 144 (190)
+.|.+++ + ...+++..|.+..+.+.||+. .+|++++ ||++|+++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~l--iD~~G~i~~~~ 137 (192)
T 2h01_A 80 LAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVL--IDKQGVVQHLL 137 (192)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEE--ECTTSBEEEEE
T ss_pred HHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEE--EcCCCEEEEEE
Confidence 8999877 2 245777788788999999999 8999999 99999654443
No 61
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.78 E-value=8.9e-19 Score=130.23 Aligned_cols=113 Identities=21% Similarity=0.182 Sum_probs=96.6
Q ss_pred ccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCC
Q psy8729 24 TYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGM 102 (190)
Q Consensus 24 ~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~ 102 (190)
.|+|++.+.+|+...++.+ +|+++||+|| ++||++|+..+|.|++++++|.++ ++++++|+.| +.+.++.|++++
T Consensus 31 aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~--~~~vv~Vs~D-~~~~~~~~~~~~ 106 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI--NATVLGVSRD-SVKSHDSFCAKQ 106 (179)
T ss_dssp HHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT--TEEEEEEESC-CHHHHHHHHHHH
T ss_pred CCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEcCC-CHHHHHHHHHHc
Confidence 7889999888877777776 7889999998 999999999999999999999876 4999999997 577889999988
Q ss_pred CCCcccCCchhHHHHHHHcCCCC------------CCeeeeeeecCCCceEEE
Q psy8729 103 PWPAIPYASETRQSLASLYNVHG------------IPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~------------~P~~~l~~id~~g~~~i~ 143 (190)
+. .+|+..|.+..+.+.|++.. .|++|+ ||++|+++.+
T Consensus 107 ~~-~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~l--ID~~G~I~~~ 156 (179)
T 3ixr_A 107 GF-TFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFL--IGPTHRIVEA 156 (179)
T ss_dssp TC-CSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEE--ECTTSBEEEE
T ss_pred CC-ceEEEECCchHHHHHcCCcccccccCcccCCcceEEEE--ECCCCEEEEE
Confidence 75 57777888889999999853 689999 9999955433
No 62
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.78 E-value=3.1e-18 Score=127.16 Aligned_cols=122 Identities=12% Similarity=0.084 Sum_probs=91.3
Q ss_pred CCCCCCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC---
Q psy8729 14 KPGGSKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR--- 90 (190)
Q Consensus 14 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~--- 90 (190)
.+....++...|+|++.+.+|....++.+ +|+++||+||++||++|+.++|.|++++++|+++ ++.+++|++|.
T Consensus 8 ~~~~~~~~~~~p~f~l~d~~G~~v~l~~~-~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~ 84 (180)
T 3kij_A 8 MKFLKPKINSFYAFEVKDAKGRTVSLEKY-KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQFGE 84 (180)
T ss_dssp --CCCCCCCCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCSTT
T ss_pred hhhhcCCcCcccceEEecCCCCEecHHHc-CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCcccc
Confidence 34455566678999999999888777776 7899999999999999999999999999999876 49999999874
Q ss_pred ----CHHHHHHHHhC-CCCCcccCC-----chh-HHHHHHHc--CCCCCCe----eeeeeecCCCceE
Q psy8729 91 ----SESSYQSYLSG-MPWPAIPYA-----SET-RQSLASLY--NVHGIPS----LILLAVEAGGRLD 141 (190)
Q Consensus 91 ----~~~~~~~~~~~-~~~~~~~~~-----~~~-~~~~~~~~--~v~~~P~----~~l~~id~~g~~~ 141 (190)
+.+.+++|+++ ++.. +|+. .+. ...+...+ ...++|+ +++ ||++|++.
T Consensus 85 ~~~d~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~l--id~~G~i~ 149 (180)
T 3kij_A 85 SEPRPSKEVESFARKNYGVT-FPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYL--VNPEGQVV 149 (180)
T ss_dssp CCCSCHHHHHHHHHHHHCCC-SCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEE--ECTTSCEE
T ss_pred CCCCCHHHHHHHHHHhcCCC-CceeeeeeccCccccHHHHHHHhcCCCCccccceEEE--ECCCCCEE
Confidence 78899999998 7642 3331 111 11111111 1346888 999 99999543
No 63
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.78 E-value=4.6e-19 Score=129.84 Aligned_cols=119 Identities=14% Similarity=0.154 Sum_probs=99.2
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCC-ChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHW-CPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~w-C~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
...+...|+|.+.+.+|....++.+ +|++++|+||++| |++|+..+|.|+++++++ . ++++++|+.| +.+.++
T Consensus 18 ~~~G~~~p~f~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~--~~~vv~is~d-~~~~~~ 91 (167)
T 2jsy_A 18 VKVGDQAPDFTVLTNSLEEKSLADM-KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G--DVNVYTISAD-LPFAQA 91 (167)
T ss_dssp CCTTSCCCCCEEEBTTCCEEEHHHH-TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S--SCEEEEEECS-SGGGTS
T ss_pred cCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C--CCEEEEEECC-CHHHHH
Confidence 3445667889998888877777776 7899999999999 999999999999999999 3 4899999998 556788
Q ss_pred HHHhCCCCCcccCCch-hHHHHHHHcCCCC------CCeeeeeeecCCCceEEEc
Q psy8729 97 SYLSGMPWPAIPYASE-TRQSLASLYNVHG------IPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~------~P~~~l~~id~~g~~~i~~ 144 (190)
+|.+++++..+|+..| .+..+.+.|++.. +|++++ ||++|++....
T Consensus 92 ~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~l--id~~G~i~~~~ 144 (167)
T 2jsy_A 92 RWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFV--LDENGKVVYAE 144 (167)
T ss_dssp CCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEE--ECTTSCEEEEE
T ss_pred HHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEE--EcCCCcEEEEE
Confidence 8999888767888888 6788999999986 499999 99999554333
No 64
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.77 E-value=7.4e-18 Score=128.31 Aligned_cols=77 Identities=12% Similarity=0.028 Sum_probs=66.5
Q ss_pred CCcccceeccCCC-ccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCH
Q psy8729 21 AKKTYNIGLAEGT-VTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSE 92 (190)
Q Consensus 21 ~~~~~~~~l~~~~-~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~ 92 (190)
....|+|++.+.+ |....++.+ +|+++||+||++||++|+.++|.|++++++|.++ ++++++|++| ++.
T Consensus 23 ~~~~p~f~l~~~~~G~~v~l~~~-~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d~~~~~e~d~~ 99 (208)
T 2f8a_A 23 MQSVYAFSARPLAGGEPVSLGSL-RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCNQFGHQENAKN 99 (208)
T ss_dssp CCCGGGCEECBTTCSSCEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTTTCSCH
T ss_pred cCccCceEeeeCCCCCCccHHHc-CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECCcccccCCCCH
Confidence 3457889998887 877777776 7899999999999999999999999999999876 4999999986 245
Q ss_pred HHHHHHHh
Q psy8729 93 SSYQSYLS 100 (190)
Q Consensus 93 ~~~~~~~~ 100 (190)
+++++|++
T Consensus 100 ~~i~~f~~ 107 (208)
T 2f8a_A 100 EEILNSLK 107 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78999997
No 65
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=132.79 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=95.6
Q ss_pred CCcccceeccC---CCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 21 AKKTYNIGLAE---GTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 21 ~~~~~~~~l~~---~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
+...|+|++.+ +++....++.+ +||++||+|| ++||++|+.++|.|++++++|.+. ++++++|++| +.+..+
T Consensus 22 G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~ 97 (211)
T 2pn8_A 22 SMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVD-SQFTHL 97 (211)
T ss_dssp SCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESS-CHHHHH
T ss_pred CCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHHHH
Confidence 44567777765 34555666666 7899999999 999999999999999999999875 5999999997 567788
Q ss_pred HHHhCC----C--CCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEEc
Q psy8729 97 SYLSGM----P--WPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 97 ~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~~ 144 (190)
.|++++ + -..+|+..|.+..+.+.||+. .+|++++ ||++|+++...
T Consensus 98 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~l--ID~~G~I~~~~ 155 (211)
T 2pn8_A 98 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFI--IDDKGILRQIT 155 (211)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEEE
T ss_pred HHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEE--ECCCCEEEEEE
Confidence 999877 2 246777788788999999994 6999999 99999654443
No 66
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.77 E-value=1.6e-18 Score=126.69 Aligned_cols=116 Identities=14% Similarity=0.232 Sum_probs=88.4
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSE 92 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~ 92 (190)
.+...|+|++.+.++....++.+ +||+++|+||++||++|+.++|.|+++++++.++ ++.+++|++| ++.
T Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~-~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~ 84 (170)
T 2p5q_A 8 NPESVHDFTVKDAKENDVDLSIF-KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTN 84 (170)
T ss_dssp --CCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCH
T ss_pred CCccccceEEEcCCCCEecHHHh-CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCH
Confidence 45567889998888877777776 7999999999999999999999999999999876 4999999987 367
Q ss_pred HHHHHHHh-CCCCCcccCC--chhHH----HHH-----HHcCC--CCCC---eeeeeeecCCCceE
Q psy8729 93 SSYQSYLS-GMPWPAIPYA--SETRQ----SLA-----SLYNV--HGIP---SLILLAVEAGGRLD 141 (190)
Q Consensus 93 ~~~~~~~~-~~~~~~~~~~--~~~~~----~~~-----~~~~v--~~~P---~~~l~~id~~g~~~ 141 (190)
+.++.|++ +++. .+|+. .|.+. .+. ..+++ .++| ++++ ||++|++.
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l--id~~G~i~ 147 (170)
T 2p5q_A 85 DQITDFVCTRFKS-EFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFL--VNKDGQVV 147 (170)
T ss_dssp HHHHHHHHHHTCC-CSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEE--ECTTSCEE
T ss_pred HHHHHHHHHhcCC-CceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEE--ECCCCCEE
Confidence 88999998 6654 24443 22211 122 23466 7788 9999 99999553
No 67
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.77 E-value=1.5e-18 Score=130.69 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=96.7
Q ss_pred CCCCCcccceeccCC-Cc--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHH
Q psy8729 18 SKGAKKTYNIGLAEG-TV--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSES 93 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~ 93 (190)
...+...|+|++.+. ++ ....++.+ .++++||+|| ++||++|+.++|.|++++++|+++ ++++++|++|. .+
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~ 80 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL--GCEVLGVSVDS-QF 80 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HH
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HH
Confidence 344556788888765 44 55666665 7899999999 999999999999999999999875 49999999984 56
Q ss_pred HHHHHHhCC----C--CCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEE
Q psy8729 94 SYQSYLSGM----P--WPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 94 ~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~ 143 (190)
..+.|++++ + -..+|+..|....+.+.|++. .+|++++ ||++|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~l--id~~G~i~~~ 140 (197)
T 1qmv_A 81 THLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFI--IDGKGVLRQI 140 (197)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEE--ECCCCcEEEE
Confidence 778888876 1 245777778788999999998 7999999 9999955433
No 68
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.77 E-value=1.1e-18 Score=131.48 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=94.4
Q ss_pred CCcccceeccCC--Ccc---ceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHH
Q psy8729 21 AKKTYNIGLAEG--TVT---TKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESS 94 (190)
Q Consensus 21 ~~~~~~~~l~~~--~~~---~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~ 94 (190)
+...|+|++.+. +|. ...++.+.+|++++|+|| ++||++|+.++|.|++++++|++. ++.+++|+.|. .+.
T Consensus 4 G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~~ 80 (198)
T 1zof_A 4 TKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDS-EQV 80 (198)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSC-HHH
T ss_pred CCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHH
Confidence 445778888776 665 455555426899999999 999999999999999999999876 49999999984 678
Q ss_pred HHHHHhC-------CCCCcccCCchhHHHHHHHcCCC-----CCCeeeeeeecCCCce
Q psy8729 95 YQSYLSG-------MPWPAIPYASETRQSLASLYNVH-----GIPSLILLAVEAGGRL 140 (190)
Q Consensus 95 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~l~~id~~g~~ 140 (190)
.+.|.++ +++ .+++..|.+..+.+.|++. .+|++++ ||++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~l--id~~G~i 135 (198)
T 1zof_A 81 HFAWKNTPVEKGGIGQV-SFPMVADITKSISRDYDVLFEEAIALRGAFL--IDKNMKV 135 (198)
T ss_dssp HHHHHTSCGGGTCCCCC-SSCEEECTTSHHHHHTTCEETTTEECEEEEE--EETTTEE
T ss_pred HHHHHHhhhhcccccCc-eeEEEECCchHHHHHhCCcccCCcccceEEE--ECCCCEE
Confidence 8899987 443 5677777788999999999 9999999 9999944
No 69
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.77 E-value=1.3e-18 Score=132.91 Aligned_cols=119 Identities=16% Similarity=0.151 Sum_probs=98.4
Q ss_pred CCCcccceeccCC--Cc--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHH
Q psy8729 20 GAKKTYNIGLAEG--TV--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESS 94 (190)
Q Consensus 20 ~~~~~~~~~l~~~--~~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~ 94 (190)
.+...|+|.+.+. ++ ....++.+.+++++||+|| ++||++|+.++|.|++++++|.+. ++++++|+.| +.+.
T Consensus 23 ~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~ 99 (213)
T 2i81_A 23 VGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER--NVELLGCSVD-SKYT 99 (213)
T ss_dssp BTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHH
T ss_pred CCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHH
Confidence 3556788888776 56 5555666536889999999 999999999999999999999875 4999999998 6778
Q ss_pred HHHHHhCC----C--CCcccCCchhHHHHHHHcCCC-----CCCeeeeeeecCCCceEEE
Q psy8729 95 YQSYLSGM----P--WPAIPYASETRQSLASLYNVH-----GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 95 ~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~-----~~P~~~l~~id~~g~~~i~ 143 (190)
.+.|++++ + -..+|+..|.+..+.+.||+. .+|++++ ||++|+++..
T Consensus 100 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~l--ID~~G~i~~~ 157 (213)
T 2i81_A 100 HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVL--IDMNGIVQHL 157 (213)
T ss_dssp HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEE--ECCCCEEEEE
Confidence 89999877 1 246788888888999999999 8999999 9999965444
No 70
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.77 E-value=1.7e-18 Score=126.51 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=87.3
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-------CH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-------SE 92 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-------~~ 92 (190)
.+...|+|++.+.+|....++.+ +|++++|+||++||++|+.++|.|++++++|.++ ++.+++|++|. +.
T Consensus 7 ~g~~~p~f~l~~~~G~~~~l~~~-~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGVDVSLEKY-RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp CCCSGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCH
T ss_pred CCcccccceeecCCCCCccHHHc-CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCH
Confidence 34567889999888877777776 7899999999999999999999999999999876 49999999863 46
Q ss_pred HHHHHH-HhCCCCCcccCCc--hhHH----HHHH-----HcC-----CCCCCeeeeeeecCCCceEE
Q psy8729 93 SSYQSY-LSGMPWPAIPYAS--ETRQ----SLAS-----LYN-----VHGIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 93 ~~~~~~-~~~~~~~~~~~~~--~~~~----~~~~-----~~~-----v~~~P~~~l~~id~~g~~~i 142 (190)
+.++.| .++++. .+|+.. |.+. .+.+ .+| +..+|++++ ||++|++..
T Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~l--id~~G~i~~ 147 (169)
T 2v1m_A 84 AEIKKFVTEKYGV-QFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFL--VDRQGQPVK 147 (169)
T ss_dssp HHHHHHHHHHHCC-CSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEE--ECTTSCEEE
T ss_pred HHHHHHHHHhcCC-CCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEE--ECCCCCEEE
Confidence 788999 476664 233332 2111 1111 125 556799999 999995533
No 71
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.77 E-value=1.4e-18 Score=131.63 Aligned_cols=116 Identities=12% Similarity=0.106 Sum_probs=99.3
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
...+...|+|.+.+.+|+...++.+ +|++++|+|| ++||++|+.++|.|++++++| + ++++++|+.| +.+.++
T Consensus 52 l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~--~v~vv~Is~D-~~~~~~ 125 (200)
T 3zrd_A 52 PQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E--NTVVLCISSD-LPFAQS 125 (200)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T--TEEEEEEESS-CHHHHT
T ss_pred CCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C--CCEEEEEECC-CHHHHH
Confidence 3446678899999998888888777 7899999999 789999999999999999998 3 4999999998 677888
Q ss_pred HHHhCCCCCcccCCchh-HHHHHHHcCCC---------CCCeeeeeeecCCCceE
Q psy8729 97 SYLSGMPWPAIPYASET-RQSLASLYNVH---------GIPSLILLAVEAGGRLD 141 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~---------~~P~~~l~~id~~g~~~ 141 (190)
+|.+++++..+++..|. +..+.+.||+. .+|++++ ||++|+++
T Consensus 126 ~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~l--ID~~G~I~ 178 (200)
T 3zrd_A 126 RFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVV--LDGQDNVI 178 (200)
T ss_dssp TCTTTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEE--ECTTSBEE
T ss_pred HHHHHcCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEE--ECCCCeEE
Confidence 99998886577888888 88999999986 3699999 99999553
No 72
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.77 E-value=1.2e-18 Score=131.08 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=93.7
Q ss_pred CCcccceeccCCC-------------c--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEE
Q psy8729 21 AKKTYNIGLAEGT-------------V--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEII 84 (190)
Q Consensus 21 ~~~~~~~~l~~~~-------------~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii 84 (190)
+...|+|++.+.+ + ....++.+ .++++||+|| ++||++|+.++|.|++++++|+++ +++++
T Consensus 7 G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv 83 (195)
T 2bmx_A 7 GDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQIL 83 (195)
T ss_dssp TCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEE
T ss_pred CCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEE
Confidence 4456777776654 4 45555555 6899999999 999999999999999999999875 59999
Q ss_pred EeeCCCCHHHHHHHHhCC----CCCcccCCchhHHHHHHHcCCC-----CCCeeeeeeecCCCceEE
Q psy8729 85 FVSSDRSESSYQSYLSGM----PWPAIPYASETRQSLASLYNVH-----GIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 85 ~i~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~l~~id~~g~~~i 142 (190)
+|+.|. .+.++.|.+++ ++ .+++..|....+.+.|++. .+|++++ ||++|++..
T Consensus 84 ~Vs~d~-~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~l--id~~G~i~~ 146 (195)
T 2bmx_A 84 GVSIDS-EFAHFQWRAQHNDLKTL-PFPMLSDIKRELSQAAGVLNADGVADRVTFI--VDPNNEIQF 146 (195)
T ss_dssp EEESSC-HHHHHHHHHHCTTGGGC-CSCEEECTTSHHHHHHTCBCTTSSBCEEEEE--ECTTSBEEE
T ss_pred EEECCC-HHHHHHHHHHhccccCC-ceeEEeCCchHHHHHhCCcccCCCccceEEE--EcCCCeEEE
Confidence 999985 67888999877 43 5666777778999999999 9999999 999995533
No 73
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.77 E-value=3e-18 Score=127.47 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=89.2
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~~ 93 (190)
+...|+|++.+.+|....++.+ +|+++||+||++||++|+.++|.|++++++|.++ ++.+++|++| ++.+
T Consensus 24 g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~ 100 (183)
T 2obi_A 24 ARSMHEFSAKDIDGHMVNLDKY-RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNE 100 (183)
T ss_dssp CCSGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHH
T ss_pred cCcccceEEEcCCCCEeeHHHc-CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHH
Confidence 5567889998888877777776 7899999999999999999999999999999876 4999999987 3678
Q ss_pred HHHHHHhCCCCCcccCCc--hhHH----HHHHHc-------C-----CCCCCeeeeeeecCCCceEE
Q psy8729 94 SYQSYLSGMPWPAIPYAS--ETRQ----SLASLY-------N-----VHGIPSLILLAVEAGGRLDV 142 (190)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~-------~-----v~~~P~~~l~~id~~g~~~i 142 (190)
.+++|++++++. +|+.. |.+. .+.+.+ + +..+|++++ ||++|++..
T Consensus 101 ~~~~~~~~~~~~-~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~l--id~~G~i~~ 164 (183)
T 2obi_A 101 EIKEFAAGYNVK-FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFL--IDKNGCVVK 164 (183)
T ss_dssp HHHHHHHTTTCC-SEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEE--ECTTSCEEE
T ss_pred HHHHHHHHcCCC-ceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEE--ECCCCCEEE
Confidence 899999988753 44432 2211 122221 4 445799999 999995533
No 74
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=129.73 Aligned_cols=117 Identities=12% Similarity=0.029 Sum_probs=88.7
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-------CHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-------SES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-------~~~ 93 (190)
+...|+|++.+.+|....++.+ +|++++|+||++||++|+.++|.|++++++++++ ++++++|++|. +.+
T Consensus 26 g~~~p~f~l~~~~G~~v~l~~~-~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~~~ 102 (185)
T 2gs3_A 26 ARSMHEFSAKDIDGHMVNLDKY-RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNE 102 (185)
T ss_dssp CCCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHH
T ss_pred CCCcCCceeEcCCCCEeeHHHc-CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCCHH
Confidence 5567889999888877777776 7899999999999999999999999999999876 49999999863 467
Q ss_pred HHHHHHhCCCCCcccCCc--hhH----HHHHHHc-------CC-----CCCCeeeeeeecCCCceEEE
Q psy8729 94 SYQSYLSGMPWPAIPYAS--ETR----QSLASLY-------NV-----HGIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~-------~v-----~~~P~~~l~~id~~g~~~i~ 143 (190)
.+++|+++++.. +|+.. |.+ ..+.+.+ |+ ..+|++++ ||++|++...
T Consensus 103 ~~~~~~~~~~~~-~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~l--id~~G~i~~~ 167 (185)
T 2gs3_A 103 EIKEFAAGYNVK-FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFL--IDKNGCVVKR 167 (185)
T ss_dssp HHHHHHHHTTCC-SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEE--ECTTSCEEEE
T ss_pred HHHHHHHHcCCC-CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEE--ECCCCCEEEe
Confidence 899999888753 44432 111 1122221 43 34799999 9999955333
No 75
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.77 E-value=2e-18 Score=127.98 Aligned_cols=118 Identities=10% Similarity=0.103 Sum_probs=95.9
Q ss_pred CCCcccceecc-CCCccceeeeeccCCcEEEE-EEEcCCChhhh-hhhHHHHHHHHHHhhcCCcEEEEE-eeCCCCHHHH
Q psy8729 20 GAKKTYNIGLA-EGTVTTKVLSYIESCQVIGL-YFSAHWCPPCK-AFTPQLIETYRKLKEDGYQFEIIF-VSSDRSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~-~~~~~~~~~~~~~~~k~vlv-~F~a~wC~~C~-~~~~~l~~l~~~~~~~g~~~~ii~-i~~d~~~~~~ 95 (190)
.+..+|+|++. +.++....++++.++++++| .||++|||+|+ .++|.|++++++|++.| +++++ |+.| +.+..
T Consensus 17 vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D-~~~~~ 93 (173)
T 3mng_A 17 VGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVN-DAFVT 93 (173)
T ss_dssp TTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESS-CHHHH
T ss_pred CCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCC-CHHHH
Confidence 35678899998 77777777776336775555 55699999999 59999999999998774 88886 8887 57789
Q ss_pred HHHHhCCCCC-cccCCchhHHHHHHHcCCC-------------CCCeeeeeeecCCCceEEE
Q psy8729 96 QSYLSGMPWP-AIPYASETRQSLASLYNVH-------------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 96 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~-------------~~P~~~l~~id~~g~~~i~ 143 (190)
++|.++++.. .+|+..|.+..++++||+. ..|++|+ || +|+++.+
T Consensus 94 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfv--ID-dG~I~~~ 152 (173)
T 3mng_A 94 GEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMV--VQ-DGIVKAL 152 (173)
T ss_dssp HHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEE--EE-TTEEEEE
T ss_pred HHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEE--EE-CCEEEEE
Confidence 9999999875 5899999999999999986 3599999 99 9955443
No 76
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.77 E-value=4.7e-18 Score=128.45 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=91.9
Q ss_pred ccceeccCCCccceeeeeccCCcEEEEEEEcCCChh-hhhhhHHHHHHHHHHhhc-CCcEEEEEeeCCC---CHHHHHHH
Q psy8729 24 TYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPP-CKAFTPQLIETYRKLKED-GYQFEIIFVSSDR---SESSYQSY 98 (190)
Q Consensus 24 ~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~-C~~~~~~l~~l~~~~~~~-g~~~~ii~i~~d~---~~~~~~~~ 98 (190)
.|+|.+.+.+|....++.+ .|+++||+||++||++ |+.++|.|+++++++.++ +.++.+++|++|. +.+.++.|
T Consensus 21 ~p~f~l~d~~G~~v~l~~~-~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~ 99 (200)
T 2b7k_A 21 GGPFHLEDMYGNEFTEKNL-LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEY 99 (200)
T ss_dssp CCCCEEEETTSCEEEGGGG-TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHH
T ss_pred CCCEEEEcCCCCEEeHHHc-CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHH
Confidence 4788888888877777776 7899999999999997 999999999999998864 3469999999984 67889999
Q ss_pred HhCCC--CCcccCCchhHHHHHHHcCCC-CCC---------------eeeeeeecCCCceEE
Q psy8729 99 LSGMP--WPAIPYASETRQSLASLYNVH-GIP---------------SLILLAVEAGGRLDV 142 (190)
Q Consensus 99 ~~~~~--~~~~~~~~~~~~~~~~~~~v~-~~P---------------~~~l~~id~~g~~~i 142 (190)
+++++ |..++...+....+.+.||+. +.| ++++ ||++|++..
T Consensus 100 ~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~l--iD~~G~i~~ 159 (200)
T 2b7k_A 100 LSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYL--MDPEGQFVD 159 (200)
T ss_dssp HTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEE--ECTTSCEEE
T ss_pred HHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEE--ECCCCcEEE
Confidence 99886 333444456677899999987 444 7899 999995543
No 77
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.77 E-value=1.5e-18 Score=129.82 Aligned_cols=117 Identities=10% Similarity=0.083 Sum_probs=95.4
Q ss_pred CCcccceeccCC-Cc--cceeeeeccCCcEEEEEEEc-CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 21 AKKTYNIGLAEG-TV--TTKVLSYIESCQVIGLYFSA-HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 21 ~~~~~~~~l~~~-~~--~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
+...|+|++.+. ++ ....++.+ +|+++||+||+ +||++|+.++|.|++++++|.++ ++++++|+.| +.+.++
T Consensus 4 G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~--~v~vv~Is~d-~~~~~~ 79 (186)
T 1n8j_A 4 NTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL--GVDVYSVSTD-THFTHK 79 (186)
T ss_dssp TCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT--TEEEEEEESS-CHHHHH
T ss_pred CCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHHHH
Confidence 446778888776 35 55566666 68999999995 99999999999999999999876 4999999998 567788
Q ss_pred HHHhCC----CCCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEEc
Q psy8729 97 SYLSGM----PWPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 97 ~~~~~~----~~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~~ 144 (190)
.|.+++ + ..+|+..|.+..+.+.||+. .+|++++ ||++|+++...
T Consensus 80 ~~~~~~~~~~~-~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~l--ID~~G~i~~~~ 134 (186)
T 1n8j_A 80 AWHSSSETIAK-IKYAMIGDPTGALTRNFDNMREDEGLADRATFV--VDPQGIIQAIE 134 (186)
T ss_dssp HHHHHCTTGGG-CCSEEEECTTSHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEEE
T ss_pred HHHHHcCcccC-CceeEEECCchHHHHHhCCccCCCCceeeEEEE--ECCCCeEEEEE
Confidence 999887 4 35677788888999999987 3799999 99999654443
No 78
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.76 E-value=6.7e-19 Score=129.15 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=99.0
Q ss_pred CCCCCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 17 GSKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
....+...|+|++.+.+|+...++.+ +|++++|+|| ++||++|+..+|.|++++++ . ++.+++|+.| +.+.+
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~--~~~vv~is~d-~~~~~ 91 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E--EGIVLTISAD-LPFAQ 91 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T--TSEEEEEESS-CHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C--CCEEEEEECC-CHHHH
Confidence 34456678899999988888877777 7889999999 78999999999999988776 2 4899999987 67889
Q ss_pred HHHHhCCCCCcccCCchh-HHHHHHHcCCCC------CCeeeeeeecCCCceEE
Q psy8729 96 QSYLSGMPWPAIPYASET-RQSLASLYNVHG------IPSLILLAVEAGGRLDV 142 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~------~P~~~l~~id~~g~~~i 142 (190)
++|.+++++..+|+..|. +..+.+.||+.. +|++++ ||++|+++.
T Consensus 92 ~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~l--iD~~G~i~~ 143 (166)
T 3p7x_A 92 KRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFV--LDADNKVVY 143 (166)
T ss_dssp HHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEE--ECTTCBEEE
T ss_pred HHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEE--ECCCCeEEE
Confidence 999998887568888888 789999999985 899999 999995533
No 79
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.76 E-value=3.7e-18 Score=132.77 Aligned_cols=119 Identities=17% Similarity=0.199 Sum_probs=97.3
Q ss_pred CCCCcccceecc---CCCccceeeeeccCCcEEEEEEEc-CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHH
Q psy8729 19 KGAKKTYNIGLA---EGTVTTKVLSYIESCQVIGLYFSA-HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESS 94 (190)
Q Consensus 19 ~~~~~~~~~~l~---~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~ 94 (190)
..+..+|+|++. ++++....++++ +|+++||+||+ +||++|+.++|.|++++++|.++ ++++++|+.| +.+.
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~--gv~vv~Is~D-~~~~ 124 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI--NTEVVACSVD-SQFT 124 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT--TEEEEEEESS-CHHH
T ss_pred CCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHH
Confidence 345677888865 455556666666 78999999998 99999999999999999999876 4999999998 4667
Q ss_pred HHHHHhCC------CCCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEE
Q psy8729 95 YQSYLSGM------PWPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 95 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~ 143 (190)
.+.|++++ +-..+|+..|.+..+.+.||+. .+|++|+ ||++|+++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~fl--ID~~G~I~~~ 183 (240)
T 3qpm_A 125 HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFI--IDEKGVLRQI 183 (240)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEE--EcCCCeEEEE
Confidence 78888765 1356788888889999999997 6899999 9999966444
No 80
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.76 E-value=4e-18 Score=125.70 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=94.8
Q ss_pred CCccc-ceeccCCCccceeeeeccCCcEEEEEEEcCCCh-hhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC--CCHHHHH
Q psy8729 21 AKKTY-NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCP-PCKAFTPQLIETYRKLKEDGYQFEIIFVSSD--RSESSYQ 96 (190)
Q Consensus 21 ~~~~~-~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~-~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d--~~~~~~~ 96 (190)
+.+.| +|++.+.+|+...++.+ .||+++|+||++||+ .|...++.|+++++++.+.|.++++++|++| ++.+.++
T Consensus 4 G~~~P~~f~l~d~~G~~v~l~~~-~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~ 82 (170)
T 3me7_A 4 GTYVPGDITLVDSYGNEFQLKNL-KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIK 82 (170)
T ss_dssp TCBCCTTCEEEETTCCEEEGGGG-TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHH
T ss_pred CCcCCCCeEEEcCCcCEEchHHh-CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHH
Confidence 34677 88998888887777777 699999999999998 6999999999999999765567999999998 4678899
Q ss_pred HHHhCCCCCc--ccC----CchhHHHHHHHcCC---------CCCCeeeeeeecCCCceE
Q psy8729 97 SYLSGMPWPA--IPY----ASETRQSLASLYNV---------HGIPSLILLAVEAGGRLD 141 (190)
Q Consensus 97 ~~~~~~~~~~--~~~----~~~~~~~~~~~~~v---------~~~P~~~l~~id~~g~~~ 141 (190)
+|+++++... +++ ..+....+++.||+ ...|++++ ||++|+++
T Consensus 83 ~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l--ID~~G~i~ 140 (170)
T 3me7_A 83 RFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVV--LSPELQIK 140 (170)
T ss_dssp HHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEE--ECTTSBEE
T ss_pred HHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEE--ECCCCeEE
Confidence 9999887432 211 23456788888774 45689999 99999554
No 81
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.76 E-value=4.9e-18 Score=130.33 Aligned_cols=119 Identities=14% Similarity=0.208 Sum_probs=96.6
Q ss_pred CCCCcccceecc---CCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHH
Q psy8729 19 KGAKKTYNIGLA---EGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESS 94 (190)
Q Consensus 19 ~~~~~~~~~~l~---~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~ 94 (190)
..+...|+|.+. +.++....++.+ .++++||+|| ++||++|+.+++.|++++++|.+. ++++++|++| +.+.
T Consensus 28 ~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~ 103 (220)
T 1zye_A 28 AVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV--NCEVVAVSVD-SHFS 103 (220)
T ss_dssp CTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT--TEEEEEEESS-CHHH
T ss_pred cCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHH
Confidence 345566777775 345556666666 6799999999 999999999999999999999876 4999999998 5667
Q ss_pred HHHHHhCC----C--CCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEE
Q psy8729 95 YQSYLSGM----P--WPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 95 ~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~ 143 (190)
.+.|++++ + -..+|+..|.+..+.+.|++. .+|++++ ||++|+++..
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~l--iD~~G~I~~~ 162 (220)
T 1zye_A 104 HLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFI--IDPNGVIKHL 162 (220)
T ss_dssp HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEE--ECCCCEEEEE
Confidence 88888876 2 246777788888999999998 9999999 9999955433
No 82
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.76 E-value=1.7e-18 Score=129.75 Aligned_cols=115 Identities=13% Similarity=0.183 Sum_probs=89.8
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-------CHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-------SES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-------~~~ 93 (190)
+...|+|++.+.+|....++.+ +|+++||+||++||++|+.++|.|++++++|.++ ++++++|++|. +.+
T Consensus 25 ~~~~p~f~l~~~~G~~~~l~~~-~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~ 101 (190)
T 2vup_A 25 ASSIFDFEVLDADHKPYNLVQH-KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEE 101 (190)
T ss_dssp CCSGGGSCCBBTTSSBCCGGGG-TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHH
T ss_pred CCcccCeEEEcCCCCEEEHHHc-CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHH
Confidence 4567889999888877777766 7899999999999999999999999999999876 49999999983 678
Q ss_pred HHHHHH-hCCCCCcccCCc--hhHHH----H-----HHHcCCCCCC------eeeeeeecCCCceE
Q psy8729 94 SYQSYL-SGMPWPAIPYAS--ETRQS----L-----ASLYNVHGIP------SLILLAVEAGGRLD 141 (190)
Q Consensus 94 ~~~~~~-~~~~~~~~~~~~--~~~~~----~-----~~~~~v~~~P------~~~l~~id~~g~~~ 141 (190)
.+++|+ ++++. .+|... |.+.. + .+.|++.++| ++++ ||++|++.
T Consensus 102 ~~~~~~~~~~~~-~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~l--id~~G~i~ 164 (190)
T 2vup_A 102 EIKEFVCTKFKA-EFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFL--IDRDGVPV 164 (190)
T ss_dssp HHHHHHHHHHCC-CSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEE--ECTTSCEE
T ss_pred HHHHHHHHhcCC-CeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEE--ECCCCcEE
Confidence 899999 76654 244432 21111 1 1346888999 9999 99999543
No 83
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.76 E-value=2e-18 Score=127.11 Aligned_cols=117 Identities=13% Similarity=0.177 Sum_probs=97.0
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHH
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~ 96 (190)
...+...|+|++.+.++....++.+ +|++++|+|| ++||++|+.++|.|+++++++ . ++++++|+.| +.+.++
T Consensus 21 l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~--~v~vv~Is~d-~~~~~~ 94 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E--GVDVTVVSMD-LPFAQK 94 (171)
T ss_dssp CCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T--TEEEEEEESS-CHHHHH
T ss_pred CCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C--CceEEEEeCC-CHHHHH
Confidence 3456678899999888877777776 6899999999 899999999999999999888 3 4999999998 567789
Q ss_pred HHHhCCCCCcccCCch-hHHHHHHHcCCCC---------CCeeeeeeecCCCceEEE
Q psy8729 97 SYLSGMPWPAIPYASE-TRQSLASLYNVHG---------IPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 97 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~---------~P~~~l~~id~~g~~~i~ 143 (190)
+|.+++++..+++..| .+..+ +.||+.. +|++++ ||++|+++..
T Consensus 95 ~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~l--iD~~G~i~~~ 148 (171)
T 2yzh_A 95 RFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFI--IDKEGKVAYV 148 (171)
T ss_dssp HHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEE--ECTTSBEEEE
T ss_pred HHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEE--EcCCCeEEEE
Confidence 9999888646777777 67778 9999862 699999 9999955433
No 84
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.76 E-value=3.2e-18 Score=129.47 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=95.5
Q ss_pred CCcccceeccCC--Cc--cceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 21 AKKTYNIGLAEG--TV--TTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 21 ~~~~~~~~l~~~--~~--~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
+...|+|++.+. ++ ....++.+ .|+++||+|| ++||++|+.++|.|++++++|.+. ++++++|+.| +.+..
T Consensus 9 G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~--~v~vi~Is~D-~~~~~ 84 (202)
T 1uul_A 9 LHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI--GCEVLACSMD-SEYSH 84 (202)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESS-CHHHH
T ss_pred CCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHH
Confidence 445677777654 44 55556665 6899999999 999999999999999999999875 4999999998 56778
Q ss_pred HHHHhCC----C--CCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEE
Q psy8729 96 QSYLSGM----P--WPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 96 ~~~~~~~----~--~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~ 143 (190)
+.|++++ + -..+|+..|.+..+.+.|++. ++|++++ ||++|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~l--id~~G~i~~~ 142 (202)
T 1uul_A 85 LAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFI--IDPKQNLRQI 142 (202)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEE--ECCCCEEEEE
Confidence 8999876 2 246777788788999999999 9999999 9999965433
No 85
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.76 E-value=2e-18 Score=125.58 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=95.6
Q ss_pred CCCCcccceeccCCCccceeeeeccCCc--EEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQ--VIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k--~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
..+...|+|++.+.+|....++.+ .++ ++||+|| ++||++|+.++|.|+++++++.++ + ++++|+.| +.+.+
T Consensus 8 ~~G~~~P~f~l~~~~G~~v~l~~~-~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~-~vv~is~d-~~~~~ 82 (159)
T 2a4v_A 8 EIGDPIPDLSLLNEDNDSISLKKI-TENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY--A-AVFGLSAD-SVTSQ 82 (159)
T ss_dssp CTTCBCCSCEEECTTSCEEEHHHH-HHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT--C-EEEEEESC-CHHHH
T ss_pred CCCCCCCCeEEECCCCCEEeHHHH-hCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC--C-cEEEEeCC-CHHHH
Confidence 445677889998888877777666 344 8899987 999999999999999999999876 3 89999988 57788
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCCCCC------eeeeeeecCCCceE
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVHGIP------SLILLAVEAGGRLD 141 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P------~~~l~~id~~g~~~ 141 (190)
++|.+++++ .+|+..|.+..+.+.||+...| ++++ | ++|+++
T Consensus 83 ~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~l--i-~~G~i~ 130 (159)
T 2a4v_A 83 KKFQSKQNL-PYHLLSDPKREFIGLLGAKKTPLSGSIRSHFI--F-VDGKLK 130 (159)
T ss_dssp HHHHHHHTC-SSEEEECTTCHHHHHHTCBSSSSSCBCCEEEE--E-ETTEEE
T ss_pred HHHHHHhCC-CceEEECCccHHHHHhCCcccccCCccceEEE--E-cCCEEE
Confidence 999998875 5777788888999999999988 8999 9 999543
No 86
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.75 E-value=1.3e-18 Score=128.77 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=93.0
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCC-ChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHW-CPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~w-C~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
..+...|+|.+.+.++....++.+ +++++||+||++| |++|+.++|.|++++++ . ++.+++|+.| +.+..++
T Consensus 19 ~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~--~v~vv~Is~D-~~~~~~~ 91 (175)
T 1xvq_A 19 AVGSPAPAFTLTGGDLGVISSDQF-RGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S--GATVLCVSKD-LPFAQKR 91 (175)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T--TCEEEEEESS-CHHHHTT
T ss_pred CcCCcCCCeEEECCCCCEEeHHHc-CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c--CCEEEEEECC-CHHHHHH
Confidence 445677889999888877777776 7899999999999 99999999999999887 2 4899999997 5667788
Q ss_pred HHhCCCCCcccCCchhHHHHHHHcCCCCC---------CeeeeeeecCCCceEEEc
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLYNVHGI---------PSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---------P~~~l~~id~~g~~~i~~ 144 (190)
|++++++..+++..|.+..+.+.|++... |++++ ||++|++....
T Consensus 92 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~l--id~~G~I~~~~ 145 (175)
T 1xvq_A 92 FCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVV--IGADGNVAYTE 145 (175)
T ss_dssp CC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEE--ECTTSBEEEEE
T ss_pred HHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEE--ECCCCeEEEEE
Confidence 88888865678888877889999999877 89999 99999554333
No 87
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.75 E-value=3.2e-18 Score=132.84 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=94.4
Q ss_pred CCcccceeccCC-Ccc--ceeeee-ccCCcEEEEEEE-cCCChhhh-hhhHHHHHHHHHHhhcCCcE-EEEEeeCCCCHH
Q psy8729 21 AKKTYNIGLAEG-TVT--TKVLSY-IESCQVIGLYFS-AHWCPPCK-AFTPQLIETYRKLKEDGYQF-EIIFVSSDRSES 93 (190)
Q Consensus 21 ~~~~~~~~l~~~-~~~--~~~~~~-~~~~k~vlv~F~-a~wC~~C~-~~~~~l~~l~~~~~~~g~~~-~ii~i~~d~~~~ 93 (190)
+...|+|++.+. ++. ...++. + +|+++||.|| ++|||+|+ .++|.|++++++|.+.| + ++++|+.| +.+
T Consensus 6 G~~aP~f~l~~~~~g~~~~v~l~~~~-~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv~is~d-~~~ 81 (241)
T 1nm3_A 6 GKKVPQVTFRTRQGDKWVDVTTSELF-DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDILVVSVN-DTF 81 (241)
T ss_dssp TSBCCCCEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESS-CHH
T ss_pred CCCCCCeEEEcccCCCceeecHHHHh-CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEcC-CHH
Confidence 456778888764 443 445555 4 7889999999 99999999 99999999999998764 8 89999987 577
Q ss_pred HHHHHHhCCCCCcccCCchhHHHHHHHcCCC-----------CCCeeeeeeecCCCceE
Q psy8729 94 SYQSYLSGMPWPAIPYASETRQSLASLYNVH-----------GIPSLILLAVEAGGRLD 141 (190)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~ 141 (190)
..+.|.+++++..+|+..|.+..+.+.||+. ..|++++ | ++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~l--i-~~G~i~ 137 (241)
T 1nm3_A 82 VMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSML--V-KNGVVE 137 (241)
T ss_dssp HHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEE--E-ETTEEE
T ss_pred HHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEE--E-ECCEEE
Confidence 8999999998766899999899999999986 4599999 9 999443
No 88
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.75 E-value=2e-18 Score=129.10 Aligned_cols=120 Identities=13% Similarity=0.170 Sum_probs=96.1
Q ss_pred CCCCCcccceeccCC--Cc-cceeeee-ccCCcE-EEEEEEcCCChhhhh-hhHHHHHHHHHHhhcCCcEE-EEEeeCCC
Q psy8729 18 SKGAKKTYNIGLAEG--TV-TTKVLSY-IESCQV-IGLYFSAHWCPPCKA-FTPQLIETYRKLKEDGYQFE-IIFVSSDR 90 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~--~~-~~~~~~~-~~~~k~-vlv~F~a~wC~~C~~-~~~~l~~l~~~~~~~g~~~~-ii~i~~d~ 90 (190)
...+..+|+|++.+. ++ ....++. + +|++ +|+.||++|||+|+. ++|.|++++++|+++| +. +++|+.|
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~L~d~~-~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d- 101 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVTTELLF-KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVN- 101 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESS-
T ss_pred CCCCCCCCCcEeecccCCCceEEeHHHHh-CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECC-
Confidence 345667889998876 66 5566666 4 5665 556677999999999 7999999999998874 77 9999997
Q ss_pred CHHHHHHHHhCCCCC-cccCCchhHHHHHHHcCCC-----------CCCeeeeeeecCCCceEEEc
Q psy8729 91 SESSYQSYLSGMPWP-AIPYASETRQSLASLYNVH-----------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 91 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~i~~ 144 (190)
+.+..+.|.+++++. .+|+..|.+..+.++||+. ..|++++ |+ +|+++.+.
T Consensus 102 ~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfi--Id-dG~I~~~~ 164 (184)
T 3uma_A 102 DLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSML--VE-DGVVKALN 164 (184)
T ss_dssp CHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEE--EE-TTEEEEEE
T ss_pred CHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEE--EC-CCEEEEEE
Confidence 577889999988875 5899999999999999985 3588999 96 99554333
No 89
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.74 E-value=1.8e-18 Score=126.78 Aligned_cols=114 Identities=24% Similarity=0.328 Sum_probs=91.4
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChh-hhhhhHHHHHHHHHHhhcC-CcEEEEEeeCCC---CHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPP-CKAFTPQLIETYRKLKEDG-YQFEIIFVSSDR---SESSY 95 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~-C~~~~~~l~~l~~~~~~~g-~~~~ii~i~~d~---~~~~~ 95 (190)
+...|+|++.+.++ ...++.+ ++++++|+||++||++ |+.++|.|++++++++++| .++.+++|++|. +.+.+
T Consensus 13 G~~~p~f~l~~~~g-~~~l~~~-~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~ 90 (172)
T 2k6v_A 13 NPKPVDFALEGPQG-PVRLSQF-QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVA 90 (172)
T ss_dssp EEEECCCEEECSSS-EEEGGGS-TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHH
T ss_pred CCCCCCeEEEcCCC-CCcHHHh-CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHH
Confidence 34578889988888 6666665 7999999999999997 9999999999999987642 259999999984 46889
Q ss_pred HHHHhCCCCCcccCCchhH---HHHHHHcCC---------------CCCCeeeeeeecCCCce
Q psy8729 96 QSYLSGMPWPAIPYASETR---QSLASLYNV---------------HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~v---------------~~~P~~~l~~id~~g~~ 140 (190)
+.|+++++. .+++..+.. ..+.+.|++ ..+|++++ +| +|++
T Consensus 91 ~~~~~~~~~-~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~l--id-~G~i 149 (172)
T 2k6v_A 91 DRYAKAFHP-SFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFV--VK-EGRL 149 (172)
T ss_dssp HHHHHHHCT-TEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEE--EE-TTEE
T ss_pred HHHHHHhCC-CcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEE--EE-CCEE
Confidence 999998874 455555554 577777774 57899999 99 9944
No 90
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.74 E-value=3.6e-17 Score=125.13 Aligned_cols=87 Identities=13% Similarity=0.069 Sum_probs=71.9
Q ss_pred CCCCcccceeccCCC-ccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------C
Q psy8729 19 KGAKKTYNIGLAEGT-VTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------R 90 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~ 90 (190)
......|+|++.+.+ |....++.+ +||++||+|||+||++|+ ++|.|++++++|.++| +++++|+++ .
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~-~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d~f~~~e~~ 105 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQY-VGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCNQFGKQEPG 105 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGG-TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCS
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHh-CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEccccCcCCCC
Confidence 334568899999888 877777777 899999999999999999 9999999999998764 999999975 2
Q ss_pred CHHHHHHHHh------CCCCCcccCC
Q psy8729 91 SESSYQSYLS------GMPWPAIPYA 110 (190)
Q Consensus 91 ~~~~~~~~~~------~~~~~~~~~~ 110 (190)
+.+++++|++ +++. .+|+.
T Consensus 106 ~~~~i~~f~~~~~~~~~~~~-~fpll 130 (215)
T 2i3y_A 106 DNKEILPGLKYVRPGGGFVP-SFQLF 130 (215)
T ss_dssp CHHHHHHHHHHTSSCTTCCC-SSEEB
T ss_pred CHHHHHHHHHhccchhccCc-cceeE
Confidence 4578899998 7764 45554
No 91
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.74 E-value=3.9e-18 Score=125.99 Aligned_cols=115 Identities=15% Similarity=0.204 Sum_probs=91.3
Q ss_pred CcccceeccCC----Cc-----cceeeeeccCC-cEEEEEEEcCCChhhhhh-hHHHHHHHHHHhhcCCcEE-EEEeeCC
Q psy8729 22 KKTYNIGLAEG----TV-----TTKVLSYIESC-QVIGLYFSAHWCPPCKAF-TPQLIETYRKLKEDGYQFE-IIFVSSD 89 (190)
Q Consensus 22 ~~~~~~~l~~~----~~-----~~~~~~~~~~~-k~vlv~F~a~wC~~C~~~-~~~l~~l~~~~~~~g~~~~-ii~i~~d 89 (190)
...|+|++.+. +| ....++.+.++ +++|+.||++|||+|+.+ +|.|++++++|.++| +. +++|+.|
T Consensus 11 ~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g--~~~vv~Is~d 88 (171)
T 2pwj_A 11 SAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG--VDSVICVAIN 88 (171)
T ss_dssp CCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT--CSEEEEEESS
T ss_pred CcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 45777887765 34 55555553245 577888999999999999 999999999998764 77 9999987
Q ss_pred CCHHHHHHHHhCCCC-CcccCCchhHHHHHHHcCCCC-----------CCeeeeeeecCCCceEE
Q psy8729 90 RSESSYQSYLSGMPW-PAIPYASETRQSLASLYNVHG-----------IPSLILLAVEAGGRLDV 142 (190)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~-----------~P~~~l~~id~~g~~~i 142 (190)
+.+.++.|.+++++ ..+|+..|.+..+.+.||+.. .|+.++ |+ +|+++.
T Consensus 89 -~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~--I~-~G~I~~ 149 (171)
T 2pwj_A 89 -DPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAY--VV-DGKVKA 149 (171)
T ss_dssp -CHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEE--EE-TTEEEE
T ss_pred -CHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEE--EE-CCEEEE
Confidence 56789999999987 378888999999999999852 567888 88 995433
No 92
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.73 E-value=1.4e-17 Score=130.44 Aligned_cols=118 Identities=15% Similarity=0.184 Sum_probs=96.9
Q ss_pred CCCcccceecc---CCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 20 GAKKTYNIGLA---EGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~---~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
.+..+|+|.+. ++++....++++ +|+++||+|| ++||++|..++|.|++++++|.++ ++++++|++| +.+..
T Consensus 64 vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~--gv~vv~IS~D-~~~~~ 139 (254)
T 3tjj_A 64 ISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVD-SQFTH 139 (254)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT--TEEEEEEESS-CHHHH
T ss_pred CCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEcCC-CHHHH
Confidence 45567888865 555666667776 7899999999 999999999999999999999876 4999999998 56677
Q ss_pred HHHHhCC------CCCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEE
Q psy8729 96 QSYLSGM------PWPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 96 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~ 143 (190)
+.|++++ +-..+|+..|.+..+.+.||+. .+|++|+ ||++|+++.+
T Consensus 140 ~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tfl--ID~~G~I~~~ 197 (254)
T 3tjj_A 140 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFI--IDDKGILRQI 197 (254)
T ss_dssp HHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEE--ECCCCeEEEE
Confidence 8888865 1346788888889999999985 5899999 9999966444
No 93
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.71 E-value=1.1e-16 Score=118.13 Aligned_cols=120 Identities=10% Similarity=0.108 Sum_probs=90.6
Q ss_pred CCcccceeccCCCccceeeeeccCCcEEEEEEEcCCCh-hhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC---CCHHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCP-PCKAFTPQLIETYRKLKEDGYQFEIIFVSSD---RSESSYQ 96 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~-~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d---~~~~~~~ 96 (190)
+.+.|+|+|.+.+|+...++++ +||++||+||++||+ .|...++.|.++++.+.+.+.++++++|++| ++.+.++
T Consensus 9 ~~~~PdF~L~d~~G~~v~l~d~-~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~ 87 (170)
T 4hde_A 9 NWDLETFQFTNQDGKPFGTKDL-KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLK 87 (170)
T ss_dssp CBCCCCCEEECTTSCEEEHHHH-TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHH
T ss_pred CCcCCCcEEECCCCCEEeHHHh-CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHH
Confidence 3467899999999988888887 899999999999998 7999999999999999888778999999998 4578899
Q ss_pred HHHhCCCC--CcccCCc-----hhHHHHHHHcCCC----------CCCeeeeeeecCCCceEEE
Q psy8729 97 SYLSGMPW--PAIPYAS-----ETRQSLASLYNVH----------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 97 ~~~~~~~~--~~~~~~~-----~~~~~~~~~~~v~----------~~P~~~l~~id~~g~~~i~ 143 (190)
.|+++++. ..+.++. +........|++. -.|++++ ||++|+++..
T Consensus 88 ~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~l--iD~~G~i~~~ 149 (170)
T 4hde_A 88 AFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYL--IDQNGKVMKK 149 (170)
T ss_dssp HHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEE--ECTTSCEEEE
T ss_pred HHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEE--EcCCCeEEEE
Confidence 99998753 2222211 1122223334332 2478899 9999965433
No 94
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.71 E-value=1.6e-16 Score=120.93 Aligned_cols=85 Identities=12% Similarity=0.006 Sum_probs=69.9
Q ss_pred CCcccceeccCCC-ccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-------CCH
Q psy8729 21 AKKTYNIGLAEGT-VTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-------RSE 92 (190)
Q Consensus 21 ~~~~~~~~l~~~~-~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-------~~~ 92 (190)
....|+|++.+.+ |....++.+ +||++||+||++||++| .++|.|++++++|.++| +++++|++| ++.
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~-kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d~f~~~e~~~~ 89 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY-AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCNQFGKQEPGEN 89 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG-TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECCCBTTCCCSCH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh-CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECcccCcCCCCCH
Confidence 3457889999888 777777777 89999999999999999 79999999999998764 999999975 245
Q ss_pred HHHHHHHh------CCCCCcccCC
Q psy8729 93 SSYQSYLS------GMPWPAIPYA 110 (190)
Q Consensus 93 ~~~~~~~~------~~~~~~~~~~ 110 (190)
++++.|++ +++. .+|+.
T Consensus 90 ~~i~~f~~~~~~~~~~~~-~fp~l 112 (207)
T 2r37_A 90 SEILPTLKYVRPGGGFVP-NFQLF 112 (207)
T ss_dssp HHHHHHHHHTSSCTTCCC-SSEEB
T ss_pred HHHHHHHHhcchhhccCc-cceee
Confidence 78899998 7764 45544
No 95
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.70 E-value=7.2e-17 Score=124.90 Aligned_cols=119 Identities=11% Similarity=0.080 Sum_probs=94.5
Q ss_pred CCCcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
.+...|+|++.+.+| ...++++..++++||+|| ++|||.|..+++.|++++++|.++ ++++++|++|. .+..+.|
T Consensus 5 iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~--~v~vigIS~D~-~~~~~~~ 80 (233)
T 2v2g_A 5 LGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR--GVKLIALSCDN-VADHKEW 80 (233)
T ss_dssp TTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc--CCEEEEEcCCC-HHHHHHH
Confidence 345678888888777 555555533348999998 999999999999999999999886 49999999984 5566777
Q ss_pred Hh------CCC-CCcccCCchhHHHHHHHcCCC------------CCCeeeeeeecCCCceEEEc
Q psy8729 99 LS------GMP-WPAIPYASETRQSLASLYNVH------------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 99 ~~------~~~-~~~~~~~~~~~~~~~~~~~v~------------~~P~~~l~~id~~g~~~i~~ 144 (190)
++ +++ -..+|+..|.+..+.+.||+. .+|++|+ ||++|+++...
T Consensus 81 ~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fi--ID~~G~I~~~~ 143 (233)
T 2v2g_A 81 SEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFI--IGPDKKLKLSI 143 (233)
T ss_dssp HHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEE--ECTTSBEEEEE
T ss_pred HHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEE--ECCCCEEEEEE
Confidence 77 452 346788888888999999985 5899999 99999665443
No 96
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.69 E-value=1.3e-16 Score=122.83 Aligned_cols=118 Identities=10% Similarity=0.073 Sum_probs=91.0
Q ss_pred CCCcccceeccCCCccceeeeeccCCc-EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 20 GAKKTYNIGLAEGTVTTKVLSYIESCQ-VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~k-~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
.+...|+|++.+.+| ...++++..++ ++|+.||++||+.|..+++.|++++++|.++ ++++++|++|. .+..+.|
T Consensus 7 ~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~IS~D~-~~~~~~~ 82 (224)
T 1prx_A 7 LGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR--NVKLIALSIDS-VEDHLAW 82 (224)
T ss_dssp TTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred CcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEcCCC-HHHHHHH
Confidence 455678888888777 55555553332 5666678999999999999999999999876 49999999984 4556666
Q ss_pred HhC----------CCCCcccCCchhHHHHHHHcCCC------------CCCeeeeeeecCCCceEEEc
Q psy8729 99 LSG----------MPWPAIPYASETRQSLASLYNVH------------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 99 ~~~----------~~~~~~~~~~~~~~~~~~~~~v~------------~~P~~~l~~id~~g~~~i~~ 144 (190)
.+. .+ ..+|+..|.+..+.+.||+. .+|++|+ ||++|+++...
T Consensus 83 ~~~i~~~~~~~~~~~-~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fi--ID~~G~I~~~~ 147 (224)
T 1prx_A 83 SKDINAYNSEEPTEK-LPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFV--FGPDKKLKLSI 147 (224)
T ss_dssp HHHHHHHTTSCCCSC-CSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEE--ECTTSBEEEEE
T ss_pred HHHHHHhhCcccccC-cCcceeecCchHHHHHhCCCCcccccCCCccccceEEEE--ECCCCEEEEEE
Confidence 654 33 46788888888999999984 4799999 99999665443
No 97
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.66 E-value=2.8e-16 Score=120.61 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=90.3
Q ss_pred CCCcccceeccCC--CccceeeeeccCCc-E-EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 20 GAKKTYNIGLAEG--TVTTKVLSYIESCQ-V-IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~~~--~~~~~~~~~~~~~k-~-vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
.+...|+|++.+. +| ...++++ .|+ + +|+.||++||+.|..+++.|++++++|.++ ++++++|++|. .+..
T Consensus 5 iG~~aP~F~l~~~~~~G-~v~l~d~-~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~vS~D~-~~~~ 79 (220)
T 1xcc_A 5 LGATFPNFTAKASGIDG-DFELYKY-IENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL--NCKLIGFSCNS-KESH 79 (220)
T ss_dssp TTCBCCCCEECBTTCSS-CEEHHHH-TTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHH
T ss_pred CCCCCCCcEeecccCCC-cEeHHHH-cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCC-HHHH
Confidence 3456788888877 77 4555555 455 4 555568999999999999999999999876 49999999984 4455
Q ss_pred HHHHh-------CCCCCcccCCchhHHHHHHHcCCC------------CCCeeeeeeecCCCceEEEc
Q psy8729 96 QSYLS-------GMPWPAIPYASETRQSLASLYNVH------------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 96 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~------------~~P~~~l~~id~~g~~~i~~ 144 (190)
+.|.+ +.+ ..+|+..|.+..+.+.||+. .+|++++ ||++|+++...
T Consensus 80 ~~~~~~i~~~~~~~~-~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fl--ID~~G~I~~~~ 144 (220)
T 1xcc_A 80 DKWIEDIKYYGKLNK-WEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFF--ISPEKKIKATV 144 (220)
T ss_dssp HHHHHHHHHHHTCSC-CCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEE--ECTTSBEEEEE
T ss_pred HHHHHHHHHHhcCCC-CcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEE--ECCCCEEEEEE
Confidence 66665 344 36788888888999999983 4799999 99999765443
No 98
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.66 E-value=1.7e-16 Score=121.72 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=95.4
Q ss_pred CCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCC-Chhhh-----hhhHHHHHHHHHHhhcCCcEEEEEeeCCCC
Q psy8729 18 SKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHW-CPPCK-----AFTPQLIETYRKLKEDGYQFEIIFVSSDRS 91 (190)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~w-C~~C~-----~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~ 91 (190)
...+..+|+|+|.+.++....++.+ .|+++||+||.+| ||.|. .+++.|+++ + . ++.+++||.| +
T Consensus 22 l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~--gv~VvgIS~D-s 92 (224)
T 3keb_A 22 PRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--P--HLKLIVITVD-S 92 (224)
T ss_dssp CCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--T--TSEEEEEESS-C
T ss_pred CCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--C--CCEEEEEECC-C
Confidence 3446678999999888877777776 7889999999888 99999 888888766 4 3 4889999987 6
Q ss_pred HHHHHHHHhCCCCCcccCCchh-HHHHHHHcCCCC---------CCeeeeeeecCCCceEEE
Q psy8729 92 ESSYQSYLSGMPWPAIPYASET-RQSLASLYNVHG---------IPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~---------~P~~~l~~id~~g~~~i~ 143 (190)
.+..+.|.+++++..+++..|. +..+.+.||+.. .|++|+ ||++|+++..
T Consensus 93 ~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfv--ID~dG~I~~~ 152 (224)
T 3keb_A 93 PSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIIL--ADAANVVHYS 152 (224)
T ss_dssp HHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEE--ECTTCBEEEE
T ss_pred HHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEE--EcCCCEEEEE
Confidence 7889999999987678999997 689999999864 799999 9999965443
No 99
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.64 E-value=7.7e-16 Score=104.85 Aligned_cols=65 Identities=23% Similarity=0.548 Sum_probs=56.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+|||+||++|+.+.|.+.++++.++ ++.++.|++|. ...++++|+|
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~d~-----------------------~~~l~~~~~V 71 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS----DVVFLKVDVDE-----------------------CEDIAQDNQI 71 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC----CeEEEEEeccc-----------------------CHHHHHHcCC
Confidence 57899999999999999999999999988874 37788887775 3578999999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++||+++ + ++|
T Consensus 72 ~~~PT~~~--~-~~G 83 (105)
T 3zzx_A 72 ACMPTFLF--M-KNG 83 (105)
T ss_dssp CBSSEEEE--E-ETT
T ss_pred CeecEEEE--E-ECC
Confidence 99999999 7 678
No 100
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.64 E-value=6.7e-16 Score=120.48 Aligned_cols=117 Identities=12% Similarity=0.172 Sum_probs=89.6
Q ss_pred CCcccceeccCCCccceee-eec-cCCcE-EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 21 AKKTYNIGLAEGTVTTKVL-SYI-ESCQV-IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~-~~~-~~~k~-vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
+...|+|++.+..|. ..+ +++ .+|++ +|++||++||+.|..+++.|++++++|.++ ++++++||+|. .+..+.
T Consensus 8 G~~aPdF~l~~~~G~-v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~--gv~VI~VS~Ds-~~~~~~ 83 (249)
T 3a2v_A 8 GERFPEMEVTTDHGV-IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL--GVDLIGLSVDS-VFSHIK 83 (249)
T ss_dssp TSBCCCEEEEETTEE-EEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHHH
T ss_pred CCCCCCeEEEcCCCC-EecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC--CcEEEEEECCC-HHHHHH
Confidence 456788888877763 334 444 15675 556789999999999999999999999886 49999999984 444444
Q ss_pred HHhC----CC-CCcccCCchhHHHHHHHcCCC-------CCCeeeeeeecCCCceEEE
Q psy8729 98 YLSG----MP-WPAIPYASETRQSLASLYNVH-------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 98 ~~~~----~~-~~~~~~~~~~~~~~~~~~~v~-------~~P~~~l~~id~~g~~~i~ 143 (190)
|.+. .+ -..+|+..|.+..+.+.||+. ++|++++ ||++|+++..
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fI--ID~dG~I~~~ 139 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFI--VDARGVIRTM 139 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEE--ECTTSBEEEE
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEE--ECCCCeEEEE
Confidence 5442 11 246788888889999999997 8999999 9999966444
No 101
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.64 E-value=6e-16 Score=109.97 Aligned_cols=69 Identities=28% Similarity=0.480 Sum_probs=61.4
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.++++.++++ +.++.|++|. ...+++.|++
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~-----------------------~~~~~~~~~v 103 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDK-----------------------EPELARDFGI 103 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCC-----------------------CHHHHHHcCC
Confidence 5899999999999999999999999999998754 8888888875 3578999999
Q ss_pred CCCCeeeeeeecCCCce
Q psy8729 124 HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~ 140 (190)
.++|++++ ++++|++
T Consensus 104 ~~~Pt~~~--~~~~g~~ 118 (141)
T 3hxs_A 104 QSIPTIWF--VPMKGEP 118 (141)
T ss_dssp CSSSEEEE--ECSSSCC
T ss_pred CCcCEEEE--EeCCCCE
Confidence 99999999 9999954
No 102
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.63 E-value=9.1e-16 Score=107.07 Aligned_cols=72 Identities=17% Similarity=0.364 Sum_probs=61.6
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.++++++.. ++.++.|+.+.+. +..++++|+
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~d~---------------------~~~~~~~~~ 79 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG---KFNIYYARLEEEK---------------------NIDLAYKYD 79 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS---SCEEEEEETTSSH---------------------HHHHHHHTT
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCc---------------------hHHHHHHcC
Confidence 3788999999999999999999999999998863 4888888843222 568899999
Q ss_pred CCCCCeeeeeeecCCCce
Q psy8729 123 VHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~~ 140 (190)
+.++|++++ ++++|++
T Consensus 80 v~~~Pt~~~--~~~~G~~ 95 (126)
T 2l57_A 80 ANIVPTTVF--LDKEGNK 95 (126)
T ss_dssp CCSSSEEEE--ECTTCCE
T ss_pred CcceeEEEE--ECCCCCE
Confidence 999999999 9989954
No 103
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.63 E-value=1.7e-15 Score=106.19 Aligned_cols=67 Identities=27% Similarity=0.539 Sum_probs=59.6
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.++++++++++ ++.++.|++|. ...++++|+
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~-----------------------~~~l~~~~~ 93 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDK-----------------------NESLARKFS 93 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGG-----------------------CHHHHHHTT
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCC-----------------------CHHHHHHcC
Confidence 3799999999999999999999999999999875 48888888774 357899999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ + ++|
T Consensus 94 v~~~Pt~~~--~-~~G 106 (128)
T 3ul3_B 94 VKSLPTIIL--L-KNK 106 (128)
T ss_dssp CCSSSEEEE--E-ETT
T ss_pred CCCcCEEEE--E-ECC
Confidence 999999999 8 578
No 104
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.62 E-value=3.1e-15 Score=104.62 Aligned_cols=87 Identities=10% Similarity=0.148 Sum_probs=69.5
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhc--CCcEEEEEeeCCCCHHHHHHHHhCC
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKED--GYQFEIIFVSSDRSESSYQSYLSGM 102 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--g~~~~ii~i~~d~~~~~~~~~~~~~ 102 (190)
....+++.+++..+. .++++++|+||++||++|+.+.|.+.++++.+... ..++.++.|+++.
T Consensus 16 ~v~~l~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~------------ 80 (127)
T 3h79_A 16 RVVELTDETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK------------ 80 (127)
T ss_dssp CCEECCTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT------------
T ss_pred ceEECChhhHHHHHh---CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc------------
Confidence 445566666655553 25889999999999999999999999999987632 2468888888875
Q ss_pred CCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 103 PWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..++++|+|.++|++++ ++++++
T Consensus 81 -----------~~~l~~~~~v~~~Pt~~~--~~~g~~ 104 (127)
T 3h79_A 81 -----------YPDVIERMRVSGFPTMRY--YTRIDK 104 (127)
T ss_dssp -----------CHHHHHHTTCCSSSEEEE--ECSSCS
T ss_pred -----------cHhHHHhcCCccCCEEEE--EeCCCC
Confidence 357899999999999999 877663
No 105
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3.4e-15 Score=113.77 Aligned_cols=119 Identities=21% Similarity=0.245 Sum_probs=97.8
Q ss_pred CCCcccceecc---CCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 20 GAKKTYNIGLA---EGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 20 ~~~~~~~~~l~---~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
.+.++|+|+++ ++++....++++ +||++||+|| +.|||.|..+++.+++.+.+|.+. ++++++||.| +....
T Consensus 25 VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~--g~~vigiS~D-s~~sh 100 (216)
T 3sbc_A 25 VQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ--GAQVLFASTD-SEYSL 100 (216)
T ss_dssp TTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT--TEEEEEEESS-CHHHH
T ss_pred cCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC--CceEEEeecC-chhhH
Confidence 35677888765 666666677776 7899999999 999999999999999999999987 4999999998 66677
Q ss_pred HHHHhCCC------CCcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCceEEEc
Q psy8729 96 QSYLSGMP------WPAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 96 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~~i~~ 144 (190)
+.|.+... -..+|+..|.+.++++.||+- ..+.+|+ ||++|+++.+.
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFi--ID~~G~Ir~~~ 159 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFI--IDPKGVIRHIT 159 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEE--ECTTSBEEEEE
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEE--ECCCCeEEEEE
Confidence 77776442 357888899999999999983 4678999 99999775543
No 106
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=106.27 Aligned_cols=83 Identities=25% Similarity=0.481 Sum_probs=66.4
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.+++..+ .++++++|+||++||++|+.+.|.+.++++++.+.+.++.++.|+++.
T Consensus 20 ~~l~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------- 79 (140)
T 2dj1_A 20 WVLNDGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS---------------- 79 (140)
T ss_dssp EECCTTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT----------------
T ss_pred EEcChHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc----------------
Confidence 345444444322 368999999999999999999999999999998765568888887664
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|++.++|++++ + ++|+
T Consensus 80 -------~~~~~~~~~v~~~Pt~~~--~-~~G~ 102 (140)
T 2dj1_A 80 -------ASMLASKFDVSGYPTIKI--L-KKGQ 102 (140)
T ss_dssp -------CHHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred -------cHHHHHHCCCCccCeEEE--E-ECCc
Confidence 357889999999999999 8 6783
No 107
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.61 E-value=1.1e-15 Score=110.38 Aligned_cols=66 Identities=14% Similarity=0.259 Sum_probs=58.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
+.+++||+|||+||++|+.+.|.|.++++++.++ +.++.|++|+ .++++++|+|
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe-----------------------~~e~a~~y~V 93 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITE-----------------------VPDFNTMYEL 93 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTT-----------------------CCTTTTTTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCC-----------------------CHHHHHHcCC
Confidence 6789999999999999999999999999999754 7888888886 3567899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++||+++ + ++|
T Consensus 94 ~siPT~~f--F-k~G 105 (160)
T 2av4_A 94 YDPVSVMF--F-YRN 105 (160)
T ss_dssp CSSEEEEE--E-ETT
T ss_pred CCCCEEEE--E-ECC
Confidence 99999988 6 466
No 108
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.59 E-value=2.6e-15 Score=102.72 Aligned_cols=79 Identities=27% Similarity=0.505 Sum_probs=64.4
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
+.+++.++...+ ++++++|+||++||++|+.+.|.++++++++++ ++.++.|++|.+
T Consensus 4 ~~l~~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~--------------- 60 (112)
T 2voc_A 4 VKATDQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDEN--------------- 60 (112)
T ss_dssp EECCTTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTC---------------
T ss_pred EEecHHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCC---------------
Confidence 345555544333 688999999999999999999999999999875 388888888752
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..++++|++.++|++++ + ++|+
T Consensus 61 --------~~l~~~~~v~~~Pt~~~--~-~~G~ 82 (112)
T 2voc_A 61 --------QETAGKYGVMSIPTLLV--L-KDGE 82 (112)
T ss_dssp --------CSHHHHTTCCSBSEEEE--E-ETTE
T ss_pred --------HHHHHHcCCCcccEEEE--E-eCCE
Confidence 46788999999999999 8 7893
No 109
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.59 E-value=4.1e-15 Score=104.64 Aligned_cols=73 Identities=23% Similarity=0.561 Sum_probs=61.9
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHH--HHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHH
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLI--ETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASL 120 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~--~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
.++++++|+||++||++|+.+.|.|. ++.+.+.++ +.++.|+++.. +....+++.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~--------------------~~~~~l~~~ 83 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNF--------------------DRNLELSQA 83 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTT--------------------TSSHHHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcc--------------------cchHHHHHH
Confidence 36899999999999999999999999 999888653 88888888421 114688999
Q ss_pred cCC---CCCCeeeeeeecCCCce
Q psy8729 121 YNV---HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 121 ~~v---~~~P~~~l~~id~~g~~ 140 (190)
|++ .++|++++ +|++|++
T Consensus 84 ~~v~~~~~~Pt~~~--~d~~G~~ 104 (133)
T 3fk8_A 84 YGDPIQDGIPAVVV--VNSDGKV 104 (133)
T ss_dssp TTCGGGGCSSEEEE--ECTTSCE
T ss_pred hCCccCCccceEEE--ECCCCCE
Confidence 999 99999999 9999944
No 110
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.59 E-value=1.3e-15 Score=117.23 Aligned_cols=83 Identities=24% Similarity=0.452 Sum_probs=67.8
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.+++... .++++++|+||++||++|+.+.|.+.++++++++.+.++.++.|+++.
T Consensus 17 v~~l~~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~--------------- 77 (241)
T 3idv_A 17 VLVLNDANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS--------------- 77 (241)
T ss_dssp EEEECTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT---------------
T ss_pred cEEecccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC---------------
Confidence 3445555554433 378999999999999999999999999999998765568888888775
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|+|.++|++++ ++ +|
T Consensus 78 --------~~~l~~~~~v~~~Pt~~~--~~-~g 99 (241)
T 3idv_A 78 --------ASVLASRFDVSGYPTIKI--LK-KG 99 (241)
T ss_dssp --------CHHHHHHTTCCSSSEEEE--EE-TT
T ss_pred --------CHHHHHhcCCCcCCEEEE--Ec-CC
Confidence 357899999999999999 86 45
No 111
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.59 E-value=7e-15 Score=98.95 Aligned_cols=79 Identities=29% Similarity=0.452 Sum_probs=64.8
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.+++..+ ++++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.
T Consensus 5 v~~l~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~--------------- 61 (106)
T 3die_A 5 IVKVTDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDE--------------- 61 (106)
T ss_dssp CEECCTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTT---------------
T ss_pred eEECCHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCc---------------
Confidence 3445555554444 6889999999999999999999999999998754 7888888875
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
+..++++|++.++|++++ ++ +|
T Consensus 62 --------~~~~~~~~~v~~~Pt~~~--~~-~G 83 (106)
T 3die_A 62 --------NPSTAAKYEVMSIPTLIV--FK-DG 83 (106)
T ss_dssp --------CHHHHHHTTCCSBSEEEE--EE-TT
T ss_pred --------CHHHHHhCCCcccCEEEE--Ee-CC
Confidence 357889999999999999 85 78
No 112
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.59 E-value=3.3e-15 Score=105.85 Aligned_cols=69 Identities=28% Similarity=0.548 Sum_probs=60.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++. +..+++.|++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~-----------------------~~~l~~~~~v 90 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEK-----------------------EQELAGAFGI 90 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCC-----------------------CHHHHHHcCC
Confidence 5789999999999999999999999999988653 8888888875 3578899999
Q ss_pred CCCCeeeeeeecCCCce
Q psy8729 124 HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~ 140 (190)
.++|++++ +|++|++
T Consensus 91 ~~~Pt~~~--~~~~G~~ 105 (136)
T 2l5l_A 91 RSIPSILF--IPMEGKP 105 (136)
T ss_dssp CSSCEEEE--ECSSSCC
T ss_pred CCCCEEEE--ECCCCcE
Confidence 99999999 9999954
No 113
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.58 E-value=4.7e-15 Score=99.83 Aligned_cols=67 Identities=28% Similarity=0.541 Sum_probs=58.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++++ +.++.++++. +..+++.|++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~-----------------------~~~~~~~~~v 69 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDE-----------------------NPETTSQFGI 69 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcC-----------------------CHHHHHHcCC
Confidence 6789999999999999999999999999988653 7888888875 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 70 ~~~Pt~~~--~-~~G~ 82 (105)
T 1nsw_A 70 MSIPTLIL--F-KGGR 82 (105)
T ss_dssp CSSSEEEE--E-ETTE
T ss_pred ccccEEEE--E-eCCe
Confidence 99999999 8 7883
No 114
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.57 E-value=2.1e-15 Score=106.60 Aligned_cols=71 Identities=20% Similarity=0.433 Sum_probs=60.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHH
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASL 120 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
++++++|+||++||++|+.+.|.+ .++++.++ ++.++.|+++... +....+++.
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~----~~~~~~vd~~~~~-------------------~~~~~l~~~ 86 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA----DTVLLQANVTAND-------------------AQDVALLKH 86 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT----TSEEEEEECTTCC-------------------HHHHHHHHH
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc----CcEEEEEeCCCCc-------------------chHHHHHHH
Confidence 588999999999999999999998 88888874 3778888886431 226789999
Q ss_pred cCCCCCCeeeeeeecCCCc
Q psy8729 121 YNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 121 ~~v~~~P~~~l~~id~~g~ 139 (190)
|++.++|++++ +|++|+
T Consensus 87 ~~v~~~Pt~~~--~d~~G~ 103 (134)
T 2fwh_A 87 LNVLGLPTILF--FDGQGQ 103 (134)
T ss_dssp TTCCSSSEEEE--ECTTSC
T ss_pred cCCCCCCEEEE--ECCCCC
Confidence 99999999999 999993
No 115
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.57 E-value=3.9e-15 Score=105.52 Aligned_cols=83 Identities=19% Similarity=0.246 Sum_probs=67.7
Q ss_pred eccCCCccceeeeeccCCcEEEEEEEcCCC--hhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 28 GLAEGTVTTKVLSYIESCQVIGLYFSAHWC--PPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 28 ~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC--~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
.+++.+++..+. ..+++++|+|||+|| ++|+.+.|.|.+++++|.++ +.++.|++|.
T Consensus 19 ~vt~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe--------------- 77 (137)
T 2qsi_A 19 LVDEATVDDFIA---HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEA--------------- 77 (137)
T ss_dssp EECTTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGG---------------
T ss_pred ccCHhHHHHHHh---cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCC---------------
Confidence 456667765553 134599999999999 99999999999999998754 8888888774
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
++.++.+|||.++||+++ + ++| +.+.
T Consensus 78 --------~~~la~~ygV~siPTlil--F-kdG--~~v~ 103 (137)
T 2qsi_A 78 --------ERGLMARFGVAVCPSLAV--V-QPE--RTLG 103 (137)
T ss_dssp --------HHHHHHHHTCCSSSEEEE--E-ECC--EEEE
T ss_pred --------CHHHHHHcCCccCCEEEE--E-ECC--EEEE
Confidence 578999999999999999 7 688 4443
No 116
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.57 E-value=5.8e-15 Score=99.72 Aligned_cols=80 Identities=23% Similarity=0.442 Sum_probs=65.2
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.+++..+ .++++++|+||++||++|+.+.|.+.++++.++++ +.++.++++.
T Consensus 7 ~~l~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~---------------- 63 (109)
T 3tco_A 7 LVLTEENFDEVI----RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDE---------------- 63 (109)
T ss_dssp EECCTTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTT----------------
T ss_pred EEecHHHHHHHH----hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEcccc----------------
Confidence 445555554443 26899999999999999999999999999998754 7788888775
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...+++.|++.++|++++ + ++|+
T Consensus 64 -------~~~~~~~~~i~~~Pt~~~--~-~~g~ 86 (109)
T 3tco_A 64 -------NQKIADKYSVLNIPTTLI--F-VNGQ 86 (109)
T ss_dssp -------CHHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred -------CHHHHHhcCcccCCEEEE--E-cCCc
Confidence 357899999999999999 8 7883
No 117
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=3.2e-15 Score=104.64 Aligned_cols=88 Identities=18% Similarity=0.367 Sum_probs=65.3
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCC
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMP 103 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~ 103 (190)
+.+++.++...+.....++++++|+||++||++|+.+.|.+ ..+.+.+... +.++.|+++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~----------- 74 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGE----------- 74 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTT-----------
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcc-----------
Confidence 44555555444432223688999999999999999999998 6666665543 666677666322
Q ss_pred CCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 104 WPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
...++++|++.++|++++ +|++|++
T Consensus 75 ----------~~~~~~~~~v~~~Pt~~~--~d~~G~~ 99 (130)
T 2kuc_A 75 ----------GVELRKKYGVHAYPTLLF--INSSGEV 99 (130)
T ss_dssp ----------HHHHHHHTTCCSSCEEEE--ECTTSCE
T ss_pred ----------hHHHHHHcCCCCCCEEEE--ECCCCcE
Confidence 578899999999999999 9999954
No 118
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.57 E-value=4.4e-15 Score=104.34 Aligned_cols=82 Identities=29% Similarity=0.515 Sum_probs=66.1
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.++...+. .++++++|+||++||++|+.+.|.++++++++++ ++.++.|+++.+
T Consensus 24 v~~l~~~~f~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~-------------- 83 (128)
T 2o8v_B 24 IIHLTDDSFDTDVL---KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQN-------------- 83 (128)
T ss_dssp SEEECTTTHHHHTT---TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTC--------------
T ss_pred cEecChhhHHHHHH---hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCC--------------
Confidence 45566666554332 3789999999999999999999999999998865 388999988753
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..+++.|++.++|++++ + ++|+
T Consensus 84 ---------~~l~~~~~v~~~Pt~~~--~-~~G~ 105 (128)
T 2o8v_B 84 ---------PGTAPKYGIRGIPTLLL--F-KNGE 105 (128)
T ss_dssp ---------CTTSGGGTCCSSSEEEE--E-ETTE
T ss_pred ---------HHHHHHcCCCccCEEEE--E-eCCE
Confidence 35678999999999999 8 7883
No 119
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.57 E-value=8.2e-15 Score=99.11 Aligned_cols=81 Identities=31% Similarity=0.578 Sum_probs=64.7
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+. .++++++|+||++||++|+.+.|.++++++++++ ++.++.|+++.+
T Consensus 5 ~~l~~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~--------------- 63 (108)
T 2trx_A 5 IHLTDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQN--------------- 63 (108)
T ss_dssp EECCTTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTC---------------
T ss_pred eecchhhHHHHHH---hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCC---------------
Confidence 3455555543332 3688999999999999999999999999998865 388888888753
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..++++|++.++|++++ + ++|+
T Consensus 64 --------~~~~~~~~v~~~Pt~~~--~-~~G~ 85 (108)
T 2trx_A 64 --------PGTAPKYGIRGIPTLLL--F-KNGE 85 (108)
T ss_dssp --------TTHHHHTTCCSSSEEEE--E-ETTE
T ss_pred --------HHHHHHcCCcccCEEEE--E-eCCE
Confidence 46788999999999999 8 6883
No 120
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.3e-14 Score=101.55 Aligned_cols=82 Identities=28% Similarity=0.500 Sum_probs=65.3
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+. .++++++|+||++||++|+.+.|.+.++++++++. +.++.|+++.
T Consensus 20 ~~l~~~~f~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~---------------- 77 (130)
T 2dml_A 20 IELTPSNFNREVI---QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADK---------------- 77 (130)
T ss_dssp EECCTTTHHHHTT---TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTT----------------
T ss_pred EECCHHHHHHHHh---cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCC----------------
Confidence 3444444443332 36889999999999999999999999999998653 7788888765
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|++.++|++++ ++++|+
T Consensus 78 -------~~~l~~~~~v~~~Pt~~~--~~~~~~ 101 (130)
T 2dml_A 78 -------HQSLGGQYGVQGFPTIKI--FGANKN 101 (130)
T ss_dssp -------CHHHHHHHTCCSSSEEEE--ESSCTT
T ss_pred -------CHHHHHHcCCCccCEEEE--EeCCCC
Confidence 357899999999999999 988884
No 121
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.57 E-value=7.8e-15 Score=99.99 Aligned_cols=68 Identities=24% Similarity=0.489 Sum_probs=58.5
Q ss_pred eccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHH
Q psy8729 41 YIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASL 120 (190)
Q Consensus 41 ~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
.+.++++++|+||++||++|+.+.|.++++++++++ +.++.|++|. ...++++
T Consensus 20 ~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~-----------------------~~~l~~~ 72 (109)
T 3f3q_A 20 AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDE-----------------------LGDVAQK 72 (109)
T ss_dssp HTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTT-----------------------CHHHHHH
T ss_pred HHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCC-----------------------CHHHHHH
Confidence 334789999999999999999999999999998743 6788888775 3578999
Q ss_pred cCCCCCCeeeeeeecCCC
Q psy8729 121 YNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 121 ~~v~~~P~~~l~~id~~g 138 (190)
|++.++|++++ ++ +|
T Consensus 73 ~~v~~~Pt~~~--~~-~G 87 (109)
T 3f3q_A 73 NEVSAMPTLLL--FK-NG 87 (109)
T ss_dssp TTCCSSSEEEE--EE-TT
T ss_pred cCCCccCEEEE--EE-CC
Confidence 99999999999 87 77
No 122
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.56 E-value=7.9e-15 Score=105.80 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=57.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+|||+||++|+.+.|.|.+++++++++ +.++.|++|. ...+++.|+|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~-----------------------~~~l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQ-----------------------TAVYTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTT-----------------------CCHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCc-----------------------CHHHHHHcCC
Confidence 6899999999999999999999999999888653 8888888875 3578999999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 76 ~~~Pt~~~--~-~~G 87 (149)
T 3gix_A 76 SYIPSTVF--F-FNG 87 (149)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CccCeEEE--E-ECC
Confidence 99999998 6 467
No 123
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.56 E-value=4.8e-15 Score=117.30 Aligned_cols=83 Identities=18% Similarity=0.341 Sum_probs=67.6
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.+++..+.. +++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++.
T Consensus 9 v~~~~~~~f~~~~~~--~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~--------------- 68 (287)
T 3qou_A 9 IVNINESNLQQVLEQ--SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDA--------------- 68 (287)
T ss_dssp EEECCTTTHHHHHTT--TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTT---------------
T ss_pred cEECCHHHHHHHHHh--cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCcc---------------
Confidence 445666777663321 25899999999999999999999999999999753 8888888875
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..+++.|+|.++||+++ + ++|+
T Consensus 69 --------~~~~~~~~~v~~~Pt~~~--~-~~G~ 91 (287)
T 3qou_A 69 --------EQMIAAQFGLRAIPTVYL--F-QNGQ 91 (287)
T ss_dssp --------CHHHHHTTTCCSSSEEEE--E-ETTE
T ss_pred --------CHHHHHHcCCCCCCeEEE--E-ECCE
Confidence 357899999999999999 8 5783
No 124
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.5e-14 Score=101.43 Aligned_cols=84 Identities=29% Similarity=0.515 Sum_probs=65.8
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhc-CCcEEEEEeeCCCCHHHHHHHHhCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKED-GYQFEIIFVSSDRSESSYQSYLSGMPW 104 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-g~~~~ii~i~~d~~~~~~~~~~~~~~~ 104 (190)
...+++.++...+. .++++++|+||++||++|+.+.|.+.++++++... ..++.++.|+++.
T Consensus 9 v~~l~~~~~~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------------- 71 (133)
T 1x5d_A 9 VIELTDDSFDKNVL---DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------------- 71 (133)
T ss_dssp CEECCTTHHHHHTT---TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--------------
T ss_pred CEEcCHhhHHHHHh---cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--------------
Confidence 34555555544332 25789999999999999999999999999998731 1248888888774
Q ss_pred CcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 105 PAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
+..+++.|++.++|++++ +++ |
T Consensus 72 ---------~~~l~~~~~v~~~Pt~~~--~~~-g 93 (133)
T 1x5d_A 72 ---------NQVLASRYGIRGFPTIKI--FQK-G 93 (133)
T ss_dssp ---------CCHHHHHHTCCSSSEEEE--EET-T
T ss_pred ---------CHHHHHhCCCCeeCeEEE--EeC-C
Confidence 357889999999999999 987 6
No 125
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.56 E-value=2.9e-14 Score=108.86 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=99.8
Q ss_pred CCCCCCccccee----ccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCC
Q psy8729 17 GSKGAKKTYNIG----LAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRS 91 (190)
Q Consensus 17 ~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~ 91 (190)
....+.++|+|+ +.++++....++++ .||++||+|| +.|||.|..++..+++.+.+|.+. ++++++||.| +
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~--g~~vigiS~D-s 100 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL--NCEVLACSID-S 100 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT--TEEEEEEESS-C
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC--CcEEEEeeCC-c
Confidence 334566788887 66778877777777 7899999999 999999999999999999999987 5999999998 6
Q ss_pred HHHHHHHHhCC------CCCcccCCchhHHHHHHHcCCC----C--CCeeeeeeecCCCceEEEc
Q psy8729 92 ESSYQSYLSGM------PWPAIPYASETRQSLASLYNVH----G--IPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 92 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~----~--~P~~~l~~id~~g~~~i~~ 144 (190)
.+..+.|..+. .-..+|+..|.+..++++||+- + .-.+|+ ||++|+++.+.
T Consensus 101 ~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFi--IDp~g~Ir~~~ 163 (219)
T 3tue_A 101 EYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFI--IDPHGMLRQIT 163 (219)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEE--ECTTSBEEEEE
T ss_pred hhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEE--ECCCCeEEEEE
Confidence 66777887654 2356888899999999999983 2 347888 99999776554
No 126
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.56 E-value=7.7e-15 Score=99.17 Aligned_cols=66 Identities=21% Similarity=0.321 Sum_probs=50.3
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+++++++++ ++.++.|++|.+ ..++++|+
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~-----------------------~~l~~~~~ 68 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDM-----------------------QEIAGRYA 68 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC-------------------------------
T ss_pred hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCC-----------------------HHHHHhcC
Confidence 478999999999999999999999999998873 488888888753 46788999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ ++ +|
T Consensus 69 v~~~Pt~~~--~~-~G 81 (105)
T 4euy_A 69 VFTGPTVLL--FY-NG 81 (105)
T ss_dssp -CCCCEEEE--EE-TT
T ss_pred CCCCCEEEE--Ee-CC
Confidence 999999999 84 78
No 127
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.56 E-value=1.4e-14 Score=98.74 Aligned_cols=83 Identities=14% Similarity=0.267 Sum_probs=63.6
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+.+. ++++++|+||++||++|+.+.|.+++++++++ ++.++.|+++..
T Consensus 8 ~~l~~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~--------------- 66 (111)
T 2pu9_C 8 TEVNKDTFWPIVKAA--GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL----DVIFLKLDCNQE--------------- 66 (111)
T ss_dssp EEECTTTHHHHHTTC--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST---------------
T ss_pred EEechHHHHHHHHhc--CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC----CeEEEEEecCcc---------------
Confidence 445555555444322 58899999999999999999999999998875 367888877621
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
...++++|++.++|++++ +++|++
T Consensus 67 -------~~~~~~~~~v~~~Pt~~~---~~~G~~ 90 (111)
T 2pu9_C 67 -------NKTLAKELGIRVVPTFKI---LKENSV 90 (111)
T ss_dssp -------THHHHHHHCCSBSSEEEE---ESSSSE
T ss_pred -------hHHHHHHcCCCeeeEEEE---EeCCcE
Confidence 367899999999999555 588843
No 128
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.56 E-value=6.4e-15 Score=102.86 Aligned_cols=86 Identities=23% Similarity=0.449 Sum_probs=65.6
Q ss_pred cccceeccC-CCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhC
Q psy8729 23 KTYNIGLAE-GTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101 (190)
Q Consensus 23 ~~~~~~l~~-~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~ 101 (190)
....+.+.+ .+++..+.....++++++|+||++||++|+.+.|.|++++++++ ++.++.|++|.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~----------- 79 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDE----------- 79 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTT-----------
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECcc-----------
Confidence 334455543 33444443322368999999999999999999999999998874 38888888874
Q ss_pred CCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 102 MPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|++.++|++++ + ++|
T Consensus 80 ------------~~~l~~~~~v~~~Pt~~~--~-~~G 101 (124)
T 1xfl_A 80 ------------LKSVASDWAIQAMPTFMF--L-KEG 101 (124)
T ss_dssp ------------SHHHHHHTTCCSSSEEEE--E-ETT
T ss_pred ------------CHHHHHHcCCCccCEEEE--E-ECC
Confidence 357889999999999888 6 688
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.55 E-value=1.1e-14 Score=99.14 Aligned_cols=81 Identities=26% Similarity=0.511 Sum_probs=64.3
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++..... .++++++|+||++||++|+.+.|.+.++++++.+ ++.++.|+++.
T Consensus 8 ~~l~~~~~~~~~~---~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~---------------- 65 (112)
T 1t00_A 8 KHVTDDSFEQDVL---KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDE---------------- 65 (112)
T ss_dssp EEECTTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTT----------------
T ss_pred EecchhhHHHHHh---hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCC----------------
Confidence 3455555443332 3688999999999999999999999999998864 38888888875
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..+++.|++.++|++++ + ++|+
T Consensus 66 -------~~~~~~~~~v~~~Pt~~~--~-~~G~ 88 (112)
T 1t00_A 66 -------NPGTAAKYGVMSIPTLNV--Y-QGGE 88 (112)
T ss_dssp -------CHHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred -------CHHHHHhCCCCcccEEEE--E-eCCE
Confidence 357889999999999888 7 6883
No 130
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.55 E-value=4.9e-15 Score=109.03 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC-
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN- 122 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 122 (190)
++++++|+|||+||++|+.+.|.|+++++.++ ++.++.|+.|. +..+...|+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~-----------------------~~~~~~~~~~ 105 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGR-----------------------AEDDLRQRLA 105 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHH-----------------------HHHHTTTTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCC-----------------------CHHHHHHHHH
Confidence 67899999999999999999999999988763 47888887763 334555565
Q ss_pred --CCCCCeeeeeeecCCCce
Q psy8729 123 --VHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 123 --v~~~P~~~l~~id~~g~~ 140 (190)
+.++||+++ ++++|++
T Consensus 106 ~~v~~iPt~i~--~~~~G~~ 123 (167)
T 1z6n_A 106 LERIAIPLVLV--LDEEFNL 123 (167)
T ss_dssp CSSCCSSEEEE--ECTTCCE
T ss_pred cCCCCcCeEEE--ECCCCCE
Confidence 999999999 9998843
No 131
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.55 E-value=2.4e-14 Score=96.40 Aligned_cols=81 Identities=27% Similarity=0.569 Sum_probs=65.2
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++..... .++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+
T Consensus 5 ~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~--------------- 63 (107)
T 2i4a_A 5 LAVSDSSFDQDVL---KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDN--------------- 63 (107)
T ss_dssp EECCTTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTC---------------
T ss_pred eecchhhhhHHHH---hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCC---------------
Confidence 3445555543332 3788999999999999999999999999999875 388988888752
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..++++|++.++|++++ + ++|+
T Consensus 64 --------~~~~~~~~v~~~Pt~~~--~-~~G~ 85 (107)
T 2i4a_A 64 --------PETPNAYQVRSIPTLML--V-RDGK 85 (107)
T ss_dssp --------CHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred --------HHHHHhcCCCccCEEEE--E-eCCE
Confidence 46789999999999999 8 7883
No 132
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.55 E-value=1.6e-14 Score=116.75 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=94.2
Q ss_pred CcccceeccCCCccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHh
Q psy8729 22 KKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLS 100 (190)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~ 100 (190)
...|+|+|++.+|+...++++ .||++||+|| +.|||.|..+++.+++ ... .++++++||.| +.+..++|.+
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~--~~~~v~gis~D-~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSR----ENF--EKAQVVGISRD-SVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHH----SCC--TTEEEEEEESC-CHHHHHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHH----Hhh--CCCEEEEEeCC-CHHHHHHHHH
Confidence 467899999999988888887 7899999999 6899999999887753 122 35999999987 6778899999
Q ss_pred CCCCCcccCCchhHHHHHHHcCCC----CCCeeeeeeecCCCceEEEcc
Q psy8729 101 GMPWPAIPYASETRQSLASLYNVH----GIPSLILLAVEAGGRLDVITT 145 (190)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~v~----~~P~~~l~~id~~g~~~i~~~ 145 (190)
+++. .+|++.|.+..+.+.||+. .+|++|+ ||++|+++.+..
T Consensus 74 ~~~l-~fp~l~D~~~~v~~~ygv~~~~~~~r~tfi--Id~~G~i~~~~~ 119 (322)
T 4eo3_A 74 KNDL-KVTLLSDPEGILHEFFNVLENGKTVRSTFL--IDRWGFVRKEWR 119 (322)
T ss_dssp HHTC-CSEEEECTTCHHHHHTTCEETTEECCEEEE--ECTTSBEEEEEE
T ss_pred hhCC-ceEEEEcCchHHHHhcCCCCCCcCccEEEE--ECCCCEEEEEEe
Confidence 8885 6888999999999999993 5889999 999997765543
No 133
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.54 E-value=1.2e-14 Score=105.10 Aligned_cols=109 Identities=13% Similarity=0.219 Sum_probs=67.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++. +..+++.|++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~-----------------------~~~l~~~~~v 83 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEG-----------------------VPEVSEKYEI 83 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------SHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCC-----------------------CHHHHHHcCC
Confidence 38899999999999999999999999998873 47888888875 3578899999
Q ss_pred CCCCeeeeeeecCCCceEEEccccccc----cccCCCCCcCCCCcccccccCCCCCCCCCCCC
Q psy8729 124 HGIPSLILLAVEAGGRLDVITTEARHE----LSEDPDGEFFPWPPKLVNVLSPRHCPKLYDSP 182 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (190)
.++|++++ ++ +|+......+...+ .++.......+-.+.....|++..++.+...+
T Consensus 84 ~~~Pt~~~--~~-~G~~~~~~~G~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~~~ 143 (153)
T 2wz9_A 84 SSVPTFLF--FK-NSQKIDRLDGAHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDKLA 143 (153)
T ss_dssp CSSSEEEE--EE-TTEEEEEEESSCHHHHHHHHHHHSCTTSSCSCCCCCCC------------
T ss_pred CCCCEEEE--EE-CCEEEEEEeCCCHHHHHHHHHHHhccccCCCccccccCCCCChhhHHHHH
Confidence 99999999 88 88432112121111 12222222223333445556666666554433
No 134
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.54 E-value=1.1e-14 Score=102.34 Aligned_cols=86 Identities=20% Similarity=0.355 Sum_probs=65.7
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCC
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPW 104 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~ 104 (190)
....+++.++...+. .++++++|+||++||++|+.+.|.|.++++++... .++.++.|+++..
T Consensus 8 ~v~~l~~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~------------- 70 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVM---DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATAN------------- 70 (133)
T ss_dssp SSEECCTTTCCCCCT---CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTS-------------
T ss_pred ceEEEcCCCHHHHhc---cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcC-------------
Confidence 344455555554443 25889999999999999999999999999999754 2578887776642
Q ss_pred CcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 105 PAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..+++.|++.++|++++ ++++++
T Consensus 71 ----------~~~~~~~~v~~~Pt~~~--~~~g~~ 93 (133)
T 2dj3_A 71 ----------DITNDQYKVEGFPTIYF--APSGDK 93 (133)
T ss_dssp ----------CCCCSSCCCSSSSEEEE--ECTTCT
T ss_pred ----------HHHHhhcCCCcCCEEEE--EeCCCc
Confidence 23456899999999999 987764
No 135
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=3.8e-14 Score=98.74 Aligned_cols=80 Identities=15% Similarity=0.311 Sum_probs=63.4
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.+++..+ +++ ++|+||++||++|+.+.|.+.++++++.+. ++.++.|+++.
T Consensus 9 v~~l~~~~f~~~~-----~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~--------------- 65 (126)
T 1x5e_A 9 VRVITDENWRELL-----EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTE--------------- 65 (126)
T ss_dssp EEECCTTTHHHHT-----SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTT---------------
T ss_pred cEEecHHHHHHHh-----CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcC---------------
Confidence 4455555554322 343 899999999999999999999999998753 48888888775
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..+++.|++.++|++++ + ++|+
T Consensus 66 --------~~~~~~~~~v~~~Pt~~~--~-~~G~ 88 (126)
T 1x5e_A 66 --------QPGLSGRFIINALPTIYH--C-KDGE 88 (126)
T ss_dssp --------CHHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred --------CHHHHHHcCCcccCEEEE--E-eCCe
Confidence 346889999999999999 8 7883
No 136
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.54 E-value=1.5e-14 Score=99.70 Aligned_cols=67 Identities=25% Similarity=0.422 Sum_probs=57.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.++++++++ +.++.|++|. ...++++|++
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~-----------------------~~~l~~~~~v 82 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDD-----------------------CQDVASECEV 82 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTT-----------------------THHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCC-----------------------CHHHHHHcCC
Confidence 789999999999999999999999999888743 7788888775 3578999999
Q ss_pred CCCCeeeeeeecCCCce
Q psy8729 124 HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~ 140 (190)
.++|++++ + ++|+.
T Consensus 83 ~~~Pt~~~--~-~~G~~ 96 (116)
T 3qfa_C 83 KSMPTFQF--F-KKGQK 96 (116)
T ss_dssp CSSSEEEE--E-SSSSE
T ss_pred ccccEEEE--E-eCCeE
Confidence 99999999 8 67743
No 137
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.54 E-value=3.7e-14 Score=109.97 Aligned_cols=87 Identities=22% Similarity=0.297 Sum_probs=70.4
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCC
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPW 104 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~ 104 (190)
+...+++.++...+. ..+++++|+||++||++|+.+.|.+.++++++++.+..+.++.|+++.+.
T Consensus 13 ~v~~l~~~~f~~~i~---~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~------------ 77 (244)
T 3q6o_A 13 PLTLLQADTVRGAVL---GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET------------ 77 (244)
T ss_dssp SSEEECTTTHHHHHS---SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT------------
T ss_pred CceeCChhhHHHHHh---hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh------------
Confidence 345566666655443 25689999999999999999999999999999874446999999986433
Q ss_pred CcccCCchhHHHHHHHcCCCCCCeeeeeeecCC
Q psy8729 105 PAIPYASETRQSLASLYNVHGIPSLILLAVEAG 137 (190)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~ 137 (190)
+..+++.|+|.++|++++ ++++
T Consensus 78 ---------~~~l~~~~~v~~~Pt~~~--~~~g 99 (244)
T 3q6o_A 78 ---------NSAVCRDFNIPGFPTVRF--FXAF 99 (244)
T ss_dssp ---------THHHHHHTTCCSSSEEEE--ECTT
T ss_pred ---------hHHHHHHcCCCccCEEEE--EeCC
Confidence 578999999999999999 8763
No 138
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=102.24 Aligned_cols=86 Identities=22% Similarity=0.354 Sum_probs=66.0
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCC
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPW 104 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~ 104 (190)
....+++.++...+... ++++++|+||++||++|+.+.|.++++++++.+. ++.++.|+++.
T Consensus 8 ~v~~l~~~~f~~~~~~~--~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--~v~~~~vd~~~-------------- 69 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERD--KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT--GLNFGKVDVGR-------------- 69 (137)
T ss_dssp CCEECCTTHHHHHHHHS--TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS--SCEEEECCTTT--------------
T ss_pred eEEEccHhhHHHHHhcC--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCcc--------------
Confidence 34455666665555322 5668999999999999999999999999998742 47888887764
Q ss_pred CcccCCchhHHHHHHHcCCC------CCCeeeeeeecCCCce
Q psy8729 105 PAIPYASETRQSLASLYNVH------GIPSLILLAVEAGGRL 140 (190)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~------~~P~~~l~~id~~g~~ 140 (190)
...++++|++. ++|++++ + ++|+.
T Consensus 70 ---------~~~~~~~~~v~~~~~~~~~Pt~~~--~-~~G~~ 99 (137)
T 2dj0_A 70 ---------YTDVSTRYKVSTSPLTKQLPTLIL--F-QGGKE 99 (137)
T ss_dssp ---------CHHHHHHTTCCCCSSSSCSSEEEE--E-SSSSE
T ss_pred ---------CHHHHHHccCcccCCcCCCCEEEE--E-ECCEE
Confidence 34678889998 9999999 8 67743
No 139
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.53 E-value=2.1e-14 Score=97.41 Aligned_cols=82 Identities=27% Similarity=0.454 Sum_probs=64.8
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.+++..+. +++++|+||++||++|+.+.|.+.++++++.....++.++.++++.
T Consensus 7 v~~l~~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--------------- 66 (111)
T 3uvt_A 7 VLALTENNFDDTIA-----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA--------------- 66 (111)
T ss_dssp SEECCTTTHHHHHH-----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT---------------
T ss_pred ceEcChhhHHHHhc-----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc---------------
Confidence 34566666554442 6789999999999999999999999988876443468888888875
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|++.++|++++ + ++|
T Consensus 67 --------~~~l~~~~~v~~~Pt~~~--~-~~g 88 (111)
T 3uvt_A 67 --------ERNICSKYSVRGYPTLLL--F-RGG 88 (111)
T ss_dssp --------CHHHHHHTTCCSSSEEEE--E-ETT
T ss_pred --------cHhHHHhcCCCcccEEEE--E-eCC
Confidence 357899999999999999 7 567
No 140
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.53 E-value=4.5e-14 Score=95.25 Aligned_cols=68 Identities=26% Similarity=0.595 Sum_probs=58.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++++ +.++.|+.+. +..+++.|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~-----------------------~~~~~~~~~v 71 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDE-----------------------SPNVASEYGI 71 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTT-----------------------CHHHHHHHTC
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCC-----------------------CHHHHHHCCC
Confidence 6889999999999999999999999999988653 7888888775 3578899999
Q ss_pred CCCCeeeeeeecCCCce
Q psy8729 124 HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~ 140 (190)
.++|++++ + ++|+.
T Consensus 72 ~~~Pt~~~--~-~~G~~ 85 (107)
T 1dby_A 72 RSIPTIMV--F-KGGKK 85 (107)
T ss_dssp CSSCEEEE--E-SSSSE
T ss_pred CcCCEEEE--E-eCCEE
Confidence 99999888 7 67843
No 141
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.53 E-value=3.8e-14 Score=101.59 Aligned_cols=67 Identities=24% Similarity=0.573 Sum_probs=58.8
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.++++++++.++ +.++.|+.+. ...+++.|+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~-----------------------~~~l~~~~~ 106 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEA-----------------------EPALSTRFR 106 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTT-----------------------CHHHHHHTT
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcC-----------------------CHHHHHHCC
Confidence 47899999999999999999999999999998653 8888888775 357899999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ + ++|
T Consensus 107 v~~~Pt~~~--~-~~G 119 (148)
T 3p2a_A 107 IRSIPTIML--Y-RNG 119 (148)
T ss_dssp CCSSSEEEE--E-ETT
T ss_pred CCccCEEEE--E-ECC
Confidence 999999999 7 578
No 142
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.53 E-value=3.1e-14 Score=98.44 Aligned_cols=67 Identities=28% Similarity=0.534 Sum_probs=58.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.|+++++++.+ ++.++.|+++. +..++++|++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~-----------------------~~~l~~~~~v 83 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDD-----------------------HTDLAIEYEV 83 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTT-----------------------THHHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCC-----------------------CHHHHHHcCC
Confidence 678999999999999999999999999998864 38888888875 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 84 ~~~Pt~~~--~-~~G~ 96 (119)
T 1w4v_A 84 SAVPTVLA--M-KNGD 96 (119)
T ss_dssp CSSSEEEE--E-ETTE
T ss_pred CcccEEEE--E-eCCc
Confidence 99999999 8 7883
No 143
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.52 E-value=3.2e-14 Score=102.98 Aligned_cols=80 Identities=24% Similarity=0.477 Sum_probs=61.5
Q ss_pred CCcEEEEEEE-cCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHH
Q psy8729 44 SCQVIGLYFS-AHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLAS 119 (190)
Q Consensus 44 ~~k~vlv~F~-a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
++++++|+|| ++||++|+.+.|.+ .++.+.+.. ++.++.|+.+.... + .++ ..+.+..+++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~----------~-~~~-~~~~~~~l~~ 110 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNH----------Q-PEE-QRQKNQELKA 110 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCC----------C-CHH-HHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccC----------C-Chh-hHhhHHHHHH
Confidence 6899999999 99999999999999 777655543 47788888765320 0 111 1244678999
Q ss_pred HcCCCCCCeeeeeeecCCCce
Q psy8729 120 LYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 120 ~~~v~~~P~~~l~~id~~g~~ 140 (190)
.|++.++|++++ +|++|++
T Consensus 111 ~~~v~~~Pt~~~--~d~~G~~ 129 (154)
T 2ju5_A 111 QYKVTGFPELVF--IDAEGKQ 129 (154)
T ss_dssp HTTCCSSSEEEE--ECTTCCE
T ss_pred HcCCCCCCEEEE--EcCCCCE
Confidence 999999999999 9999944
No 144
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.52 E-value=3.1e-14 Score=96.60 Aligned_cols=66 Identities=23% Similarity=0.484 Sum_probs=58.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++. ...++++|++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~-----------------------~~~l~~~~~v 74 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEE-----------------------EKTLFQRFSL 74 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCc-----------------------ChhHHHhcCC
Confidence 6789999999999999999999999999998653 7888888875 3578999999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 75 ~~~Pt~~~--~-~~g 86 (111)
T 3gnj_A 75 KGVPQILY--F-KDG 86 (111)
T ss_dssp CSSCEEEE--E-ETT
T ss_pred CcCCEEEE--E-ECC
Confidence 99999999 8 577
No 145
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.52 E-value=1.2e-14 Score=111.34 Aligned_cols=92 Identities=27% Similarity=0.477 Sum_probs=69.7
Q ss_pred CCCCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHH
Q psy8729 16 GGSKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSY 95 (190)
Q Consensus 16 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~ 95 (190)
..+.+........+++.++...+. .++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++.+
T Consensus 4 ~~~~~~~~~~~~~lt~~~f~~~v~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~---- 73 (222)
T 3dxb_A 4 HHHHHPMSDKIIHLTDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN---- 73 (222)
T ss_dssp -----CCSCCCEECCTTTHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC----
T ss_pred cccCCCCCCCceeCCHHHHHHHHH---hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCC----
Confidence 333444445556677777765443 36889999999999999999999999999998754 78888888753
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..++++|+|.++|++++ ++ +|+
T Consensus 74 -------------------~~l~~~~~v~~~Pt~~~--~~-~G~ 95 (222)
T 3dxb_A 74 -------------------PGTAPKYGIRGIPTLLL--FK-NGE 95 (222)
T ss_dssp -------------------TTTGGGGTCCSBSEEEE--EE-TTE
T ss_pred -------------------HHHHHHcCCCcCCEEEE--EE-CCe
Confidence 35678999999999999 75 773
No 146
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.52 E-value=2e-14 Score=102.88 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=57.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.++++++.+ ++.++.|++|.+ ..++++|++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~-----------------------~~~~~~~~i 75 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEV-----------------------PDFNKMYEL 75 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTC-----------------------CTTTTSSCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccC-----------------------HHHHHHcCC
Confidence 589999999999999999999999999999864 388999988753 356789999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ ++ +|
T Consensus 76 ~~~Pt~~~--~~-~G 87 (142)
T 1qgv_A 76 YDPCTVMF--FF-RN 87 (142)
T ss_dssp CSSCEEEE--EE-TT
T ss_pred CCCCEEEE--EE-CC
Confidence 99999999 84 66
No 147
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.52 E-value=2.7e-14 Score=98.80 Aligned_cols=69 Identities=20% Similarity=0.314 Sum_probs=60.0
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.. ..+++.|+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~-----------------------~~~~~~~~ 72 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAY-----------------------PQTCQKAG 72 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTC-----------------------HHHHHHTT
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCC-----------------------HHHHHHcC
Confidence 3688999999999999999999999999999875 388888888753 46889999
Q ss_pred CCCCCeeeeeeecCCCc
Q psy8729 123 VHGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~ 139 (190)
+.++|++++ ++++|.
T Consensus 73 v~~~Pt~~~--~~~~~~ 87 (122)
T 3aps_A 73 IKAYPSVKL--YQYERA 87 (122)
T ss_dssp CCSSSEEEE--EEEEGG
T ss_pred CCccceEEE--EeCCCc
Confidence 999999999 887773
No 148
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.52 E-value=3.3e-14 Score=95.88 Aligned_cols=79 Identities=23% Similarity=0.489 Sum_probs=63.7
Q ss_pred eccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcc
Q psy8729 28 GLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAI 107 (190)
Q Consensus 28 ~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~ 107 (190)
.+++.++.... .++++++|+||++||++|+.+.|.+.++++++++ ++.++.++++.
T Consensus 5 ~l~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~----------------- 60 (109)
T 2yzu_A 5 EVTDQNFDETL----GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDE----------------- 60 (109)
T ss_dssp ECCTTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTT-----------------
T ss_pred EccHhHHHHHh----cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCC-----------------
Confidence 34555554222 3688999999999999999999999999998864 38888888875
Q ss_pred cCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 108 PYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 108 ~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..+++.|++.++|++++ + ++|+
T Consensus 61 ------~~~~~~~~~v~~~Pt~~~--~-~~g~ 83 (109)
T 2yzu_A 61 ------NPKTAMRYRVMSIPTVIL--F-KDGQ 83 (109)
T ss_dssp ------CHHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred ------CHhHHHhCCCCcCCEEEE--E-eCCc
Confidence 347889999999999999 8 7883
No 149
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.7e-14 Score=97.30 Aligned_cols=67 Identities=21% Similarity=0.560 Sum_probs=55.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.++++++... ++.++.++++. ...+++.|++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~--~~~~~~vd~~~-----------------------~~~~~~~~~v 74 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS--NVSFLSIDADE-----------------------NSEISELFEI 74 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT--TSEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC--CEEEEEEeccc-----------------------CHHHHHHcCC
Confidence 4889999999999999999999999999886433 48888888875 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 75 ~~~Pt~~~--~-~~G 86 (112)
T 3d6i_A 75 SAVPYFII--I-HKG 86 (112)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CcccEEEE--E-ECC
Confidence 99999999 7 588
No 150
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.52 E-value=4.1e-14 Score=97.56 Aligned_cols=81 Identities=30% Similarity=0.508 Sum_probs=64.6
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+++.++..... .++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 14 v~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~--------------- 72 (121)
T 2i1u_A 14 TIKVTDASFATDVL---SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDT--------------- 72 (121)
T ss_dssp SEECCTTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTT---------------
T ss_pred ceecCHHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCC---------------
Confidence 34555555543333 3678999999999999999999999999998864 38888888875
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|++.++|++++ + ++|
T Consensus 73 --------~~~~~~~~~i~~~Pt~~~--~-~~g 94 (121)
T 2i1u_A 73 --------NPETARNFQVVSIPTLIL--F-KDG 94 (121)
T ss_dssp --------CHHHHHHTTCCSSSEEEE--E-ETT
T ss_pred --------CHHHHHhcCCCcCCEEEE--E-ECC
Confidence 357889999999999998 7 478
No 151
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.52 E-value=4.2e-14 Score=96.45 Aligned_cols=81 Identities=25% Similarity=0.575 Sum_probs=64.9
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+ ..++++++|+||++||++|+.+.|.+.++++.++++ +.++.|+++.+
T Consensus 10 ~~l~~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~--------------- 68 (115)
T 1thx_A 10 ITITDAEFESEV---LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPN--------------- 68 (115)
T ss_dssp EECCGGGHHHHT---TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTC---------------
T ss_pred EEeeccchhhHh---hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCC---------------
Confidence 444444443333 236889999999999999999999999999988653 88888888753
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..+++.|++.++|++++ + ++|+
T Consensus 69 --------~~~~~~~~v~~~Pt~~~--~-~~G~ 90 (115)
T 1thx_A 69 --------PTTVKKYKVEGVPALRL--V-KGEQ 90 (115)
T ss_dssp --------HHHHHHTTCCSSSEEEE--E-ETTE
T ss_pred --------HHHHHHcCCCceeEEEE--E-cCCE
Confidence 47889999999999999 8 7883
No 152
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.51 E-value=3.9e-14 Score=95.81 Aligned_cols=65 Identities=18% Similarity=0.310 Sum_probs=56.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.++++. +..+++.|++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~-----------------------~~~~~~~~~v 72 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQ-----------------------CQGTAATNNI 72 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------SHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECcc-----------------------CHHHHHhcCC
Confidence 68899999999999999999999999999873 37888888875 3568899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 73 ~~~Pt~~~--~-~~G 84 (107)
T 1gh2_A 73 SATPTFQF--F-RNK 84 (107)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CcccEEEE--E-ECC
Confidence 99999999 7 678
No 153
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.51 E-value=7.9e-15 Score=107.75 Aligned_cols=93 Identities=11% Similarity=0.210 Sum_probs=58.6
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHH--HHhCCCCCcccCCchhHHHH
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQS--YLSGMPWPAIPYASETRQSL 117 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 117 (190)
.++++++|+|||+||++|+.+.+.+ .++.+.+.+ ++.++.|++|...+.... +........+....+....+
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYL 121 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHH
Confidence 4799999999999999999975444 555555544 388999998754311000 00000001111112222333
Q ss_pred -HHHcCCCCCCeeeeeeecCCCce
Q psy8729 118 -ASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 118 -~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
.+.|++.++|++++ +|++|++
T Consensus 122 ~~~~~~v~~~Pt~~l--id~~G~~ 143 (172)
T 3f9u_A 122 QRVKFGANAQPFYVL--IDNEGNP 143 (172)
T ss_dssp HHHHHSCCCSSEEEE--ECTTSCB
T ss_pred HHHHcCCCCcceEEE--ECCCCCE
Confidence 58899999999999 9999943
No 154
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.51 E-value=4.6e-14 Score=102.37 Aligned_cols=68 Identities=25% Similarity=0.522 Sum_probs=59.6
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.++++++++.++ +.++.|+++. +..++++|+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~-----------------------~~~l~~~~~ 115 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQA-----------------------HPAVAGRHR 115 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTT-----------------------STHHHHHTT
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCc-----------------------cHHHHHHcC
Confidence 47889999999999999999999999999998753 8888888875 347899999
Q ss_pred CCCCCeeeeeeecCCCc
Q psy8729 123 VHGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~ 139 (190)
+.++|++++ + ++|+
T Consensus 116 i~~~Pt~~~--~-~~G~ 129 (155)
T 2ppt_A 116 IQGIPAFIL--F-HKGR 129 (155)
T ss_dssp CCSSSEEEE--E-ETTE
T ss_pred CCcCCEEEE--E-eCCe
Confidence 999999999 8 6883
No 155
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.50 E-value=4.4e-14 Score=98.06 Aligned_cols=82 Identities=16% Similarity=0.328 Sum_probs=62.5
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+.+. ++++++|+||++||++|+.+.|.+++++++++ ++.++.++.+.+
T Consensus 21 ~~l~~~~~~~~~~~~--~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~--------------- 79 (124)
T 1faa_A 21 TEVNKDTFWPIVKAA--GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL----DVIFLKLDCNQE--------------- 79 (124)
T ss_dssp EEECTTTHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST---------------
T ss_pred EEecchhHHHHHHhc--CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC----CCEEEEEecCcc---------------
Confidence 445555554443322 68899999999999999999999999998875 267777877621
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|++.++|++++ + ++|+
T Consensus 80 -------~~~~~~~~~v~~~Pt~~~--~-~~G~ 102 (124)
T 1faa_A 80 -------NKTLAKELGIRVVPTFKI--L-KENS 102 (124)
T ss_dssp -------THHHHHHHCCSSSSEEEE--E-ETTE
T ss_pred -------hHHHHHHcCCCeeeEEEE--E-eCCc
Confidence 367889999999999666 4 7883
No 156
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.50 E-value=2.4e-14 Score=100.17 Aligned_cols=66 Identities=21% Similarity=0.458 Sum_probs=57.5
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++. ...+++.|+
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~-----------------------~~~l~~~~~ 87 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADN-----------------------NSEIVSKCR 87 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTT-----------------------CHHHHHHTT
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCC-----------------------CHHHHHHcC
Confidence 478899999999999999999999999999873 37888888875 357889999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ + ++|
T Consensus 88 v~~~Pt~~i--~-~~G 100 (125)
T 1r26_A 88 VLQLPTFII--A-RSG 100 (125)
T ss_dssp CCSSSEEEE--E-ETT
T ss_pred CCcccEEEE--E-eCC
Confidence 999999888 6 688
No 157
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.50 E-value=6.3e-14 Score=95.31 Aligned_cols=66 Identities=21% Similarity=0.425 Sum_probs=57.2
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. ...+++.|++.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~-----------------------~~~~~~~~~v~ 77 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDA-----------------------VAAVAEAAGIT 77 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTT-----------------------THHHHHHHTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCc-----------------------hHHHHHHcCCC
Confidence 78999999999999999999999999998864 37888888774 35789999999
Q ss_pred CCCeeeeeeecCCCc
Q psy8729 125 GIPSLILLAVEAGGR 139 (190)
Q Consensus 125 ~~P~~~l~~id~~g~ 139 (190)
++|++++ + ++|+
T Consensus 78 ~~Pt~~~--~-~~G~ 89 (112)
T 1ep7_A 78 AMPTFHV--Y-KDGV 89 (112)
T ss_dssp BSSEEEE--E-ETTE
T ss_pred cccEEEE--E-ECCe
Confidence 9999888 6 6883
No 158
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.49 E-value=5.1e-14 Score=100.19 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=58.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++. ...+++.|++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~-----------------------~~~l~~~~~v 76 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIAT-----------------------NPWTAEKYGV 76 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTT-----------------------CHHHHHHHTC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCc-----------------------CHhHHHHCCC
Confidence 6889999999999999999999999999998764 7888888875 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 77 ~~~Pt~~~--~-~~G~ 89 (140)
T 3hz4_A 77 QGTPTFKF--F-CHGR 89 (140)
T ss_dssp CEESEEEE--E-ETTE
T ss_pred CcCCEEEE--E-eCCc
Confidence 99999999 7 6783
No 159
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.49 E-value=5.4e-14 Score=94.36 Aligned_cols=67 Identities=25% Similarity=0.557 Sum_probs=57.7
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++++ +.++.++.+. +..++++|++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~-----------------------~~~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDE-----------------------APGIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcc-----------------------hHHHHHhCCC
Confidence 5789999999999999999999999999988653 7888888775 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 71 ~~~Pt~~~--~-~~g~ 83 (105)
T 1fb6_A 71 RSIPTVLF--F-KNGE 83 (105)
T ss_dssp CSSSEEEE--E-ETTE
T ss_pred CcccEEEE--E-eCCe
Confidence 99999888 6 5783
No 160
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.49 E-value=1.6e-13 Score=92.23 Aligned_cols=66 Identities=29% Similarity=0.675 Sum_probs=57.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++. ++.++.++.+. +..+++.|++
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~-----------------------~~~~~~~~~v 72 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDE-----------------------CEDIAMEYNI 72 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccc-----------------------hHHHHHHcCC
Confidence 688999999999999999999999999998863 48888888875 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 73 ~~~Pt~~~--~-~~G 84 (106)
T 1xwb_A 73 SSMPTFVF--L-KNG 84 (106)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CcccEEEE--E-cCC
Confidence 99999888 6 578
No 161
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.49 E-value=2e-14 Score=99.46 Aligned_cols=66 Identities=21% Similarity=0.593 Sum_probs=56.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.++++++++++ +.++.|++|. +..++++|++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~-----------------------~~~~~~~~~v 85 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDE-----------------------LKPIAEQFSV 85 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCC-----------------------CHHHHHHcCC
Confidence 588999999999999999999999999888753 7788888775 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 86 ~~~Pt~~~--~-~~G~ 98 (122)
T 2vlu_A 86 EAMPTFLF--M-KEGD 98 (122)
T ss_dssp CSSSEEEE--E-ETTE
T ss_pred CcccEEEE--E-eCCE
Confidence 99999888 6 6883
No 162
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.2e-14 Score=113.81 Aligned_cols=90 Identities=18% Similarity=0.341 Sum_probs=71.6
Q ss_pred CCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
.+......+.|++.+++..+. ..+++++|+|||+||++|+.+.|.+.++++.+.+. +.++.|++|.+.
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~---~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~------ 79 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIH---NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNK------ 79 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHT---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTT------
T ss_pred CCCCCCCeEEeCHHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCcc------
Confidence 333445566777766665553 25788999999999999999999999999998754 788888888433
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCC
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAG 137 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~ 137 (190)
...+++.|+|.++|++++ ++++
T Consensus 80 ---------------~~~l~~~~~I~~~Pt~~~--~~~g 101 (298)
T 3ed3_A 80 ---------------NKALCAKYDVNGFPTLMV--FRPP 101 (298)
T ss_dssp ---------------THHHHHHTTCCBSSEEEE--EECC
T ss_pred ---------------CHHHHHhCCCCccceEEE--EECC
Confidence 478999999999999999 8654
No 163
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.48 E-value=5.9e-14 Score=97.03 Aligned_cols=64 Identities=27% Similarity=0.480 Sum_probs=56.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.++++++++ . ++.++.|+++. ...+++.|++
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~---~v~~~~vd~~~-----------------------~~~~~~~~~i 74 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K---DVTFIKVDVDK-----------------------NGNAADAYGV 74 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T---TSEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C---CeEEEEEECCC-----------------------CHHHHHhcCC
Confidence 5889999999999999999999999999987 2 47888888875 3578899999
Q ss_pred CCCCeeeeeeecC
Q psy8729 124 HGIPSLILLAVEA 136 (190)
Q Consensus 124 ~~~P~~~l~~id~ 136 (190)
.++|++++ +++
T Consensus 75 ~~~Pt~~~--~~~ 85 (118)
T 2f51_A 75 SSIPALFF--VKK 85 (118)
T ss_dssp CSSSEEEE--EEE
T ss_pred CCCCEEEE--EeC
Confidence 99999999 865
No 164
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.48 E-value=6.5e-14 Score=93.50 Aligned_cols=77 Identities=23% Similarity=0.467 Sum_probs=62.0
Q ss_pred ccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCccc
Q psy8729 29 LAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIP 108 (190)
Q Consensus 29 l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~ 108 (190)
+++.+++..+ .++++++|+||++||++|+.+.|.+.++++.+++ +.++.++++.
T Consensus 4 l~~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~------------------ 57 (104)
T 2e0q_A 4 LDSKNFDSFL----ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDE------------------ 57 (104)
T ss_dssp CCTTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTT------------------
T ss_pred cCHHHHHHHH----hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCC------------------
Confidence 4444444433 3688999999999999999999999999888753 7788888775
Q ss_pred CCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 109 YASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 109 ~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+..+++.|++.++|++++ + ++|+
T Consensus 58 -----~~~~~~~~~v~~~Pt~~~--~-~~g~ 80 (104)
T 2e0q_A 58 -----NPDIAARYGVMSLPTVIF--F-KDGE 80 (104)
T ss_dssp -----CHHHHHHTTCCSSCEEEE--E-ETTE
T ss_pred -----CHHHHHhCCccccCEEEE--E-ECCe
Confidence 357889999999999999 8 7883
No 165
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.48 E-value=1.2e-13 Score=102.15 Aligned_cols=102 Identities=14% Similarity=0.271 Sum_probs=82.2
Q ss_pred eeeeeccCCc-EEEEEEEcCCChhhhh-hhHHHHHHHHHHhhcCCcE-EEEEeeCCCCHHHHHHHHhCCCCC-cccCCch
Q psy8729 37 KVLSYIESCQ-VIGLYFSAHWCPPCKA-FTPQLIETYRKLKEDGYQF-EIIFVSSDRSESSYQSYLSGMPWP-AIPYASE 112 (190)
Q Consensus 37 ~~~~~~~~~k-~vlv~F~a~wC~~C~~-~~~~l~~l~~~~~~~g~~~-~ii~i~~d~~~~~~~~~~~~~~~~-~~~~~~~ 112 (190)
..++++-+++ ++|+.||+.|||.|.. +++.+++.+++|.+.| + ++++||.| +....++|.++++.. .+|++.|
T Consensus 39 vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lLsD 115 (176)
T 4f82_A 39 CSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMMAD 115 (176)
T ss_dssp EEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESS-CHHHHHHHHHHTTCTTTSEEEEC
T ss_pred EeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEEEeCC-CHHHHHHHHHHhCCCCCceEEEc
Confidence 3344432455 4566778999999999 9999999999999875 8 89999998 678899999988865 5999999
Q ss_pred hHHHHHHHcCCC-----------CCCeeeeeeecCCCceEEEc
Q psy8729 113 TRQSLASLYNVH-----------GIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 113 ~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~i~~ 144 (190)
.+..++++||+. ..|.+++ | ++|+++.+.
T Consensus 116 ~~~~va~ayGv~~~~~~~G~g~~s~R~tfI--I-~dG~I~~~~ 155 (176)
T 4f82_A 116 GSAAFTHALGLTQDLSARGMGIRSLRYAMV--I-DGGVVKTLA 155 (176)
T ss_dssp TTCHHHHHHTCEEECGGGTCCEEECCEEEE--E-ETTEEEEEE
T ss_pred CchHHHHHhCCCccccccCCCcccccEEEE--E-cCCEEEEEE
Confidence 999999999973 2488999 9 999554333
No 166
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=3.1e-14 Score=100.62 Aligned_cols=65 Identities=17% Similarity=0.388 Sum_probs=53.7
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.++++++++ ++.++.|+++. ...+++.|++
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~-----------------------~~~l~~~~~v 90 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDI-----------------------HPKLNDQHNI 90 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccc-----------------------hHHHHHhcCC
Confidence 5789999999999999999999998876654 36677777664 3578899999
Q ss_pred CCCCeeeeeee-cCCC
Q psy8729 124 HGIPSLILLAV-EAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~i-d~~g 138 (190)
.++|++++ + +++|
T Consensus 91 ~~~Pt~~~--~~~~~g 104 (133)
T 3cxg_A 91 KALPTFEF--YFNLNN 104 (133)
T ss_dssp CSSSEEEE--EEEETT
T ss_pred CCCCEEEE--EEecCC
Confidence 99999999 8 4566
No 167
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.48 E-value=8.7e-14 Score=93.43 Aligned_cols=65 Identities=28% Similarity=0.490 Sum_probs=56.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.++++++++ +.++.++.+. ...+++.|++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~-----------------------~~~~~~~~~v 71 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDD-----------------------CQDVASESEV 71 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhh-----------------------hHHHHHHcCC
Confidence 688999999999999999999999999998743 7788888775 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 72 ~~~Pt~~~--~-~~g 83 (105)
T 3m9j_A 72 KSMPTFQF--F-KKG 83 (105)
T ss_dssp CBSSEEEE--E-ETT
T ss_pred CcCcEEEE--E-ECC
Confidence 99999999 8 567
No 168
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.48 E-value=1.4e-14 Score=99.38 Aligned_cols=83 Identities=25% Similarity=0.514 Sum_probs=65.0
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++.... .++++++|+||++||++|+.+.|.+.++++.+++.+.++.++.++++.+
T Consensus 10 ~~l~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------- 70 (120)
T 1mek_A 10 LVLRKSNFAEAL----AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE--------------- 70 (120)
T ss_dssp EECCTTTHHHHH----HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC---------------
T ss_pred EEechhhHHHHH----ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC---------------
Confidence 445555554332 3688999999999999999999999999999876544677777776642
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
..++++|++.++|++++ + ++|+
T Consensus 71 --------~~~~~~~~v~~~Pt~~~--~-~~g~ 92 (120)
T 1mek_A 71 --------SDLAQQYGVRGYPTIKF--F-RNGD 92 (120)
T ss_dssp --------CSSHHHHTCCSSSEEEE--E-ESSC
T ss_pred --------HHHHHHCCCCcccEEEE--E-eCCC
Confidence 35688999999999999 8 5673
No 169
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.48 E-value=1.1e-13 Score=95.19 Aligned_cols=67 Identities=22% Similarity=0.524 Sum_probs=57.4
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.++++++++++ +.++.|+++. +..++++|+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~-----------------------~~~l~~~~~ 80 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDE-----------------------SPDIAKECE 80 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTT-----------------------CHHHHHHTT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCC-----------------------CHHHHHHCC
Confidence 4688999999999999999999999999888753 7788888775 357889999
Q ss_pred CCCCCeeeeeeecCCCc
Q psy8729 123 VHGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~ 139 (190)
+.++|++++ + ++|+
T Consensus 81 v~~~Pt~~~--~-~~G~ 94 (114)
T 2oe3_A 81 VTAMPTFVL--G-KDGQ 94 (114)
T ss_dssp CCSBSEEEE--E-ETTE
T ss_pred CCcccEEEE--E-eCCe
Confidence 999999888 6 7883
No 170
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.47 E-value=5.9e-14 Score=96.50 Aligned_cols=64 Identities=28% Similarity=0.583 Sum_probs=55.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.++++++++ ++.++.|+.+. ...++++|++
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~-----------------------~~~~~~~~~v 83 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDK-----------------------LEETARKYNI 83 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTT-----------------------SHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCc-----------------------cHHHHHHcCC
Confidence 6889999999999999999999999988776 26788888764 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 84 ~~~Pt~~~--~-~~G 95 (117)
T 2xc2_A 84 SAMPTFIA--I-KNG 95 (117)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CccceEEE--E-eCC
Confidence 99999888 6 678
No 171
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.47 E-value=1.6e-13 Score=94.46 Aligned_cols=71 Identities=20% Similarity=0.466 Sum_probs=55.5
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.++++++.. .+..++++.... .+....+++.|+
T Consensus 27 ~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-----~v~~~~~~~~~~-----------------~~~~~~~~~~~~ 84 (118)
T 1zma_A 27 DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-----HIYFINSEEPSQ-----------------LNDLQAFRSRYG 84 (118)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-----CCEEEETTCGGG-----------------HHHHHHHHHHHT
T ss_pred hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-----eEEEEECCCcCc-----------------HHHHHHHHHHcC
Confidence 3678899999999999999999999999988753 255666653220 112467889999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ +. +|
T Consensus 85 i~~~Pt~~~--~~-~G 97 (118)
T 1zma_A 85 IPTVPGFVH--IT-DG 97 (118)
T ss_dssp CCSSCEEEE--EE-TT
T ss_pred CCCCCeEEE--EE-CC
Confidence 999999999 84 77
No 172
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.47 E-value=8.2e-14 Score=98.63 Aligned_cols=66 Identities=18% Similarity=0.519 Sum_probs=57.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++ ++.++.|++|. ...+++.|++
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~-----------------------~~~~~~~~~v 97 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDE-----------------------LSDFSASWEI 97 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------SHHHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcc-----------------------cHHHHHHcCC
Confidence 58899999999999999999999999998873 37888888875 3578999999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 98 ~~~Pt~~~--~-~~G~ 110 (139)
T 3d22_A 98 KATPTFFF--L-RDGQ 110 (139)
T ss_dssp CEESEEEE--E-ETTE
T ss_pred CcccEEEE--E-cCCe
Confidence 99999998 7 7883
No 173
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.46 E-value=2.8e-13 Score=100.25 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=68.8
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEc-------CCChhhhhhhHHHHHHHHHHhhcC--CcEEEEEeeCCCCHHHH
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSA-------HWCPPCKAFTPQLIETYRKLKEDG--YQFEIIFVSSDRSESSY 95 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a-------~wC~~C~~~~~~l~~l~~~~~~~g--~~~~ii~i~~d~~~~~~ 95 (190)
..+.+++.+++..+... ++.++||+||| +||++|+.+.|.++++++++.... .++.+..|++|.
T Consensus 19 ~vi~lt~~nF~~~v~~~--~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~----- 91 (178)
T 3ga4_A 19 GVITVTADNYPLLSRGV--PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE----- 91 (178)
T ss_dssp SEEECCTTTHHHHTTCC--TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT-----
T ss_pred CCEECCHHHHHHHHccc--CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc-----
Confidence 45678888887655322 56789999999 499999999999999999997221 147888888775
Q ss_pred HHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 96 QSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
++.++++|||.++||+++ +.+++
T Consensus 92 ------------------~~~la~~~~I~siPtl~~--F~~g~ 114 (178)
T 3ga4_A 92 ------------------VPQLVKDLKLQNVPHLVV--YPPAE 114 (178)
T ss_dssp ------------------CHHHHHHTTCCSSCEEEE--ECCCC
T ss_pred ------------------CHHHHHHcCCCCCCEEEE--EcCCC
Confidence 468999999999999999 75443
No 174
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.46 E-value=5.7e-14 Score=96.91 Aligned_cols=83 Identities=22% Similarity=0.387 Sum_probs=63.0
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcC--CcEEEEEeeCCCCHHHHHHHHhCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDG--YQFEIIFVSSDRSESSYQSYLSGMP 103 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g--~~~~ii~i~~d~~~~~~~~~~~~~~ 103 (190)
...+++.++...+. .++++++|+||++||++|+.+.|.+.++++++++.+ .++.++.|+++..+
T Consensus 9 v~~l~~~~f~~~v~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------- 74 (121)
T 2djj_A 9 VTVVVAKNYNEIVL---DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----------- 74 (121)
T ss_dssp SEECCTTTTTTSSS---CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-----------
T ss_pred eEEecccCHHHHhh---cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-----------
Confidence 34466666655442 268899999999999999999999999999997621 24778888776421
Q ss_pred CCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 104 WPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+++ ++.++|++++ ++++|+
T Consensus 75 -------------~~~--~v~~~Pt~~~--~~~~~~ 93 (121)
T 2djj_A 75 -------------VPD--EIQGFPTIKL--YPAGAK 93 (121)
T ss_dssp -------------CSS--CCSSSSEEEE--ECSSCT
T ss_pred -------------ccc--ccCcCCeEEE--EeCcCC
Confidence 222 9999999999 988774
No 175
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.46 E-value=4.2e-13 Score=103.11 Aligned_cols=102 Identities=20% Similarity=0.363 Sum_probs=75.1
Q ss_pred hHHHHHhhhCCCCCCCCCcccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEE
Q psy8729 5 SDQLYNNLLKPGGSKGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEII 84 (190)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii 84 (190)
....+...+.+....+ ......++..++...+ ..+++++|+||++||++|+.+.|.+.++++++.++++++.++
T Consensus 113 l~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~ 186 (241)
T 3idv_A 113 IVAKVREVSQPDWTPP--PEVTLVLTKENFDEVV----NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLA 186 (241)
T ss_dssp HHHHHHHHHSTTCCCC--CCSSEECCTTTHHHHH----HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEE
T ss_pred HHHHHhhccCcccccc--cccceeccHHHHHHhh----ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEE
Confidence 3444555665554432 1223334455544333 357899999999999999999999999999998765668888
Q ss_pred EeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 85 FVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 85 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
.|+++. ...++++|+|.++|++++ ++ +|
T Consensus 187 ~vd~~~-----------------------~~~l~~~~~v~~~Pt~~~--~~-~g 214 (241)
T 3idv_A 187 KVDATA-----------------------ETDLAKRFDVSGYPTLKI--FR-KG 214 (241)
T ss_dssp EEETTT-----------------------CHHHHHHTTCCSSSEEEE--EE-TT
T ss_pred EEECCC-----------------------CHHHHHHcCCcccCEEEE--EE-CC
Confidence 888775 357899999999999999 86 56
No 176
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.46 E-value=2.5e-13 Score=116.14 Aligned_cols=97 Identities=20% Similarity=0.320 Sum_probs=75.1
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCC
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPW 104 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~ 104 (190)
+...+++.+++..+. .++++++|+|||+||++|+.+.|.+.++++++.+.+..+.++.|+++.+.
T Consensus 13 ~V~~Lt~~~f~~~v~---~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~------------ 77 (519)
T 3t58_A 13 PLTLLDADSVRPTVL---GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET------------ 77 (519)
T ss_dssp SSEEECTTTHHHHHS---SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG------------
T ss_pred CcEECChHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc------------
Confidence 344566666655443 25789999999999999999999999999999874446999999987433
Q ss_pred CcccCCchhHHHHHHHcCCCCCCeeeeeeecC---CCceEEEcccc
Q psy8729 105 PAIPYASETRQSLASLYNVHGIPSLILLAVEA---GGRLDVITTEA 147 (190)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~---~g~~~i~~~~~ 147 (190)
...+++.|+|.++|++++ +++ +|+......++
T Consensus 78 ---------~~~l~~~~~V~~~PTl~~--f~~g~~~G~~~~~~~g~ 112 (519)
T 3t58_A 78 ---------NSAVCREFNIAGFPTVRF--FQAFTKNGSGATLPGAG 112 (519)
T ss_dssp ---------GHHHHHHTTCCSBSEEEE--ECTTCCSCCCEEECCSS
T ss_pred ---------cHHHHHHcCCcccCEEEE--EcCcccCCCceeEecCC
Confidence 578999999999999999 886 55433444433
No 177
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.18 E-value=6.1e-15 Score=103.26 Aligned_cols=70 Identities=29% Similarity=0.550 Sum_probs=57.7
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHH
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLAS 119 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
.++++++|+||++||++|+.+.|.+ .++.+.+.+ ++.++.|+++.+. ...+++
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~---------------------~~~~~~ 72 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPE---------------------GQELAR 72 (130)
Confidence 3789999999999999999999999 888887754 3677777765322 467889
Q ss_pred HcCCCCCCeeeeeeecC-CC
Q psy8729 120 LYNVHGIPSLILLAVEA-GG 138 (190)
Q Consensus 120 ~~~v~~~P~~~l~~id~-~g 138 (190)
.|++.++|++++ +|+ +|
T Consensus 73 ~~~v~~~Pt~~~--~d~~~G 90 (130)
T 2lst_A 73 RYRVPGTPTFVF--LVPKAG 90 (130)
Confidence 999999999999 985 57
No 178
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.45 E-value=3e-13 Score=91.97 Aligned_cols=65 Identities=32% Similarity=0.694 Sum_probs=57.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++ ++.++.|+++. ...++++|++
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~-----------------------~~~~~~~~~v 77 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDE-----------------------LKAVAEEWNV 77 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTT-----------------------CHHHHHHHHC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccc-----------------------cHHHHHhCCC
Confidence 58999999999999999999999999988874 48888888875 3577899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 78 ~~~Pt~~~--~-~~G 89 (113)
T 1ti3_A 78 EAMPTFIF--L-KDG 89 (113)
T ss_dssp SSTTEEEE--E-ETT
T ss_pred CcccEEEE--E-eCC
Confidence 99999999 7 578
No 179
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.45 E-value=1.6e-14 Score=102.72 Aligned_cols=78 Identities=9% Similarity=0.211 Sum_probs=62.5
Q ss_pred ccCCCccceeeeeccCCcEEEEEEEcCC--ChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 29 LAEGTVTTKVLSYIESCQVIGLYFSAHW--CPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 29 l~~~~~~~~~~~~~~~~k~vlv~F~a~w--C~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
+++.+++..+. +++++||+||++| |++|+.+.|.|.+++++|.++ .+.++.|++|.
T Consensus 22 ~t~~~F~~~v~----~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~--~v~~~KVdvDe---------------- 79 (140)
T 2qgv_A 22 VSESRLDDWLT----QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY--TWQVAIADLEQ---------------- 79 (140)
T ss_dssp CCHHHHHHHHH----TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS--CCEEEECCHHH----------------
T ss_pred CCHHHHHHHHh----CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC--eEEEEEEECCC----------------
Confidence 44555554442 5567889999999 999999999999999998642 17788777763
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
+..++.+|||.++||+++ + ++|
T Consensus 80 -------~~~lA~~ygV~sIPTlil--F-k~G 101 (140)
T 2qgv_A 80 -------SEAIGDRFGAFRFPATLV--F-TGG 101 (140)
T ss_dssp -------HHHHHHHHTCCSSSEEEE--E-ETT
T ss_pred -------CHHHHHHcCCccCCEEEE--E-ECC
Confidence 678999999999999999 7 688
No 180
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.44 E-value=5.6e-13 Score=94.54 Aligned_cols=66 Identities=30% Similarity=0.576 Sum_probs=56.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.++ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|++
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~-----------------------~~~l~~~~~v 102 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDE-----------------------HPGLAARYGV 102 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCC-----------------------CHHHHHHCCC
Confidence 345 99999999999999999999999999865 38898888875 3578899999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 103 ~~~Pt~~~--~-~~G~ 115 (140)
T 1v98_A 103 RSVPTLVL--F-RRGA 115 (140)
T ss_dssp CSSSEEEE--E-ETTE
T ss_pred CccCEEEE--E-eCCc
Confidence 99999999 7 6883
No 181
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.44 E-value=1.5e-13 Score=93.75 Aligned_cols=68 Identities=24% Similarity=0.424 Sum_probs=57.0
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.++++.++ ++.++.|+++. ...++++|+
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~-----------------------~~~l~~~~~ 69 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEA-----------------------RPELMKELG 69 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGG-----------------------CHHHHHHTT
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcC-----------------------CHHHHHHcC
Confidence 467899999999999999999999999887764 36677777664 357889999
Q ss_pred CCCCCeeeeeeecCCCce
Q psy8729 123 VHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~~ 140 (190)
+.++|++++ + ++|+.
T Consensus 70 v~~~Pt~~~--~-~~G~~ 84 (110)
T 2l6c_A 70 FERVPTLVF--I-RDGKV 84 (110)
T ss_dssp CCSSCEEEE--E-ESSSE
T ss_pred CcccCEEEE--E-ECCEE
Confidence 999999999 8 78843
No 182
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.43 E-value=4e-13 Score=89.91 Aligned_cols=65 Identities=25% Similarity=0.630 Sum_probs=56.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.++++. ...+++.|++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~-----------------------~~~~~~~~~v 70 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQ-----------------------NEEAAAKYSV 70 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccC-----------------------CHHHHHHcCC
Confidence 68899999999999999999999999988874 37788888774 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ ++ +|
T Consensus 71 ~~~Pt~~~--~~-~g 82 (104)
T 2vim_A 71 TAMPTFVF--IK-DG 82 (104)
T ss_dssp CSSSEEEE--EE-TT
T ss_pred ccccEEEE--Ee-CC
Confidence 99999888 74 78
No 183
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.43 E-value=4.9e-13 Score=91.21 Aligned_cols=65 Identities=23% Similarity=0.479 Sum_probs=56.4
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++. ...++++|++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~-----------------------~~~~~~~~~v 77 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDE-----------------------VSEVTEKENI 77 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------THHHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCC-----------------------CHHHHHHcCC
Confidence 68899999999999999999999999988874 37788888775 3478899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 78 ~~~Pt~~~--~-~~G 89 (112)
T 1syr_A 78 TSMPTFKV--Y-KNG 89 (112)
T ss_dssp CSSSEEEE--E-ETT
T ss_pred CcccEEEE--E-ECC
Confidence 99999888 6 578
No 184
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.43 E-value=1.5e-13 Score=95.26 Aligned_cols=68 Identities=22% Similarity=0.475 Sum_probs=58.8
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.++++++++++. ++.++.|++|. ...+++.|+
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~-----------------------~~~~~~~~~ 85 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDE-----------------------QSQIAQEVG 85 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTT-----------------------CHHHHHHHT
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcC-----------------------CHHHHHHcC
Confidence 47889999999999999999999999999888764 37888888875 357889999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ + ++|
T Consensus 86 v~~~Pt~~~--~-~~G 98 (121)
T 2j23_A 86 IRAMPTFVF--F-KNG 98 (121)
T ss_dssp CCSSSEEEE--E-ETT
T ss_pred CCcccEEEE--E-ECC
Confidence 999999999 7 478
No 185
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.43 E-value=3.6e-13 Score=93.70 Aligned_cols=80 Identities=19% Similarity=0.463 Sum_probs=62.1
Q ss_pred CCcEEEEEEEcC-------CChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHH
Q psy8729 44 SCQVIGLYFSAH-------WCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQS 116 (190)
Q Consensus 44 ~~k~vlv~F~a~-------wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (190)
++++++|+||++ ||++|+.+.|.+.++++++++ ++.++.|+++... .+ .+....
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~-~~---------------~d~~~~ 83 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKP-YW---------------KDPNND 83 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHH-HH---------------HCTTCH
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCch-hh---------------hchhHH
Confidence 489999999999 999999999999999888754 4888888886321 11 112467
Q ss_pred HHHHcCCCCCCeeeeeeecCCCceEEEccc
Q psy8729 117 LASLYNVHGIPSLILLAVEAGGRLDVITTE 146 (190)
Q Consensus 117 ~~~~~~v~~~P~~~l~~id~~g~~~i~~~~ 146 (190)
+++.|++.++|++++ +++.+ ++....
T Consensus 84 ~~~~~~i~~~Pt~~~--~~~~~--~~~g~~ 109 (123)
T 1wou_A 84 FRKNLKVTAVPTLLK--YGTPQ--KLVESE 109 (123)
T ss_dssp HHHHHCCCSSSEEEE--TTSSC--EEEGGG
T ss_pred HHHHCCCCeeCEEEE--EcCCc--eEeccc
Confidence 888999999999999 98755 454433
No 186
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.42 E-value=8.6e-14 Score=97.05 Aligned_cols=82 Identities=30% Similarity=0.575 Sum_probs=60.7
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCCh--------------hhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCH
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCP--------------PCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSE 92 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~--------------~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~ 92 (190)
+.+++.+++..+. .++++++|+||++||+ +|+.+.|.+++++++++++ +.++.|++|.+
T Consensus 6 ~~l~~~~f~~~~~---~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~---~~~~~vd~d~~- 78 (123)
T 1oaz_A 6 IHLTDDSFDTDVL---KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN- 78 (123)
T ss_dssp EECCSTTHHHHTT---SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSC-
T ss_pred EecChhhHHHHHH---hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC---eEEEEEECCCC-
Confidence 4455566544332 3789999999999999 9999999999999888653 78888888753
Q ss_pred HHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCce
Q psy8729 93 SSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~ 140 (190)
..++++|++.++|++++ + ++|+.
T Consensus 79 ----------------------~~l~~~~~v~~~Pt~~~--~-~~G~~ 101 (123)
T 1oaz_A 79 ----------------------PGTAPKYGIRGIPTLLL--F-KNGEV 101 (123)
T ss_dssp ----------------------TTTGGGGTCCBSSEEEE--E-ESSSE
T ss_pred ----------------------HHHHHHcCCCccCEEEE--E-ECCEE
Confidence 35688999999999999 8 78843
No 187
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.42 E-value=4.2e-13 Score=101.78 Aligned_cols=69 Identities=20% Similarity=0.322 Sum_probs=59.7
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.+.++++++++ .+.++.|+++. ...+++.|+
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~-----------------------~~~l~~~~~ 165 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGD-----------------------DRMLCRMKG 165 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTT-----------------------CHHHHHHTT
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCc-----------------------cHHHHHHcC
Confidence 3688999999999999999999999999999864 38888888775 357889999
Q ss_pred CCCCCeeeeeeecCCCce
Q psy8729 123 VHGIPSLILLAVEAGGRL 140 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~~ 140 (190)
+.++|++++ + ++|+.
T Consensus 166 v~~~Pt~~~--~-~~G~~ 180 (210)
T 3apq_A 166 VNSYPSLFI--F-RSGMA 180 (210)
T ss_dssp CCSSSEEEE--E-CTTSC
T ss_pred CCcCCeEEE--E-ECCCc
Confidence 999999999 8 78854
No 188
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.42 E-value=8.9e-14 Score=98.36 Aligned_cols=71 Identities=21% Similarity=0.298 Sum_probs=55.0
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCC
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGI 126 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 126 (190)
+++|+||++||++|+.+.|.+.+++++++ +.++.|+++..... ...+....++++|++.++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~--------------~~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGE--------------RELSAARLEMNKAGVEGT 93 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCH--------------HHHHHHHHHHHHHTCCSS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhh--------------hhhhhhHHHHHHcCCcee
Confidence 89999999999999999999999888763 56777877532110 001225788999999999
Q ss_pred CeeeeeeecCCCc
Q psy8729 127 PSLILLAVEAGGR 139 (190)
Q Consensus 127 P~~~l~~id~~g~ 139 (190)
|++++ ++ +|+
T Consensus 94 Pt~~~--~~-~G~ 103 (135)
T 3emx_A 94 PTLVF--YK-EGR 103 (135)
T ss_dssp SEEEE--EE-TTE
T ss_pred CeEEE--Ec-CCE
Confidence 99888 76 783
No 189
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.42 E-value=4.6e-13 Score=91.71 Aligned_cols=65 Identities=26% Similarity=0.631 Sum_probs=56.4
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+++++++++ ++.++.|+.+. ...+++.|++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~-----------------------~~~~~~~~~v 79 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDE-----------------------LKDVAEAYNV 79 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTT-----------------------SHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEccc-----------------------CHHHHHHcCC
Confidence 47899999999999999999999999998875 37788888764 3578899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ + ++|
T Consensus 80 ~~~Pt~~~--~-~~g 91 (118)
T 2vm1_A 80 EAMPTFLF--I-KDG 91 (118)
T ss_dssp CSBSEEEE--E-ETT
T ss_pred CcCcEEEE--E-eCC
Confidence 99999988 7 678
No 190
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.40 E-value=4.9e-13 Score=112.41 Aligned_cols=87 Identities=13% Similarity=0.146 Sum_probs=69.1
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcC-----CcEEEEEeeCCCCHHHHHHHH
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDG-----YQFEIIFVSSDRSESSYQSYL 99 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g-----~~~~ii~i~~d~~~~~~~~~~ 99 (190)
....+++.+++..+... .++++||+|||+||++|+.+.|.+.++++++.... ..+.++.|++|.
T Consensus 24 ~V~~Lt~~~F~~~l~~~--~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~--------- 92 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVA--PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS--------- 92 (470)
T ss_dssp TEEECSCSCGGGTCTTG--GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT---------
T ss_pred CcEECCHHHHHHHHHhC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC---------
Confidence 45556677776554322 45789999999999999999999999999987432 148898898875
Q ss_pred hCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 100 SGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|+|.++||+++ ++++|
T Consensus 93 --------------~~~la~~y~V~~~PTlil--f~~gg 115 (470)
T 3qcp_A 93 --------------EVDLCRKYDINFVPRLFF--FYPRD 115 (470)
T ss_dssp --------------CHHHHHHTTCCSSCEEEE--EEESS
T ss_pred --------------CHHHHHHcCCCccCeEEE--EECCC
Confidence 357899999999999999 87655
No 191
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.39 E-value=1.1e-12 Score=96.81 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=56.9
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHH---HHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHH
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQ---LIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLAS 119 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~---l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
.++|+|+|+||++||++|+.+.++ ..++++.+.+. +.++.|+.|...+..+.|. ..+..
T Consensus 37 ~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~---------------~~~q~ 98 (173)
T 3ira_A 37 KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYM---------------TVCQI 98 (173)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHH---------------HHHHH
T ss_pred HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHH---------------HHHHH
Confidence 479999999999999999999883 24556666543 6677777765544333332 11222
Q ss_pred HcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 120 LYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 120 ~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
.+|+.++|++++ ++++| +++.
T Consensus 99 ~~gv~g~Pt~v~--l~~dG--~~v~ 119 (173)
T 3ira_A 99 ILGRGGWPLNII--MTPGK--KPFF 119 (173)
T ss_dssp HHSCCCSSEEEE--ECTTS--CEEE
T ss_pred HcCCCCCcceee--ECCCC--Ccee
Confidence 359999999999 99999 5554
No 192
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.39 E-value=2.7e-13 Score=94.08 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=51.8
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
+++++|+||++||++|+.+.|.|.+++++|+ ++.++.|++|. . .++|+|.
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~------------------------~--~~~~~v~ 72 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNS------------------------C--IQHYHDN 72 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGG------------------------T--STTCCGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHH------------------------h--HHHCCCC
Confidence 4599999999999999999999999999885 36788887762 1 3689999
Q ss_pred CCCeeeeeeecCCC
Q psy8729 125 GIPSLILLAVEAGG 138 (190)
Q Consensus 125 ~~P~~~l~~id~~g 138 (190)
++||+++ + ++|
T Consensus 73 ~~PT~~~--f-k~G 83 (118)
T 3evi_A 73 CLPTIFV--Y-KNG 83 (118)
T ss_dssp GCSEEEE--E-ETT
T ss_pred CCCEEEE--E-ECC
Confidence 9999999 7 577
No 193
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.37 E-value=6.7e-14 Score=102.43 Aligned_cols=70 Identities=19% Similarity=0.435 Sum_probs=53.7
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+||++||++|+.+.|.|.++.+.+... +.++.|+++.+.+ .+...|+
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~----------------------~~~~~~~ 98 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE----------------------PKDEDFS 98 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS----------------------CSCGGGC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch----------------------HHHHHhc
Confidence 47899999999999999999999999977665432 4567777764321 1345677
Q ss_pred C--CCCCeeeeeeecCCCc
Q psy8729 123 V--HGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v--~~~P~~~l~~id~~g~ 139 (190)
+ .++|++++ +|++|+
T Consensus 99 ~~~~~~Pt~~~--~d~~G~ 115 (164)
T 1sen_A 99 PDGGYIPRILF--LDPSGK 115 (164)
T ss_dssp TTCSCSSEEEE--ECTTSC
T ss_pred ccCCcCCeEEE--ECCCCC
Confidence 7 66999999 999993
No 194
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.06 E-value=4.8e-14 Score=94.48 Aligned_cols=67 Identities=27% Similarity=0.589 Sum_probs=56.7
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|.||++||++|+.+.|.++++++++++ ++.++.++.+. +..+++.|+
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~-----------------------~~~~~~~~~ 70 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDE-----------------------NPNTAAQYG 70 (106)
Confidence 3688999999999999999999999999988864 36777776653 356788999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ + ++|
T Consensus 71 v~~~Pt~~~--~-~~g 83 (106)
T 2yj7_A 71 IRSIPTLLL--F-KNG 83 (106)
Confidence 999999999 8 678
No 195
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.36 E-value=1.2e-12 Score=107.80 Aligned_cols=83 Identities=23% Similarity=0.365 Sum_probs=65.6
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcC---CcEEEEEeeCCCCHHHHHHHHhCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDG---YQFEIIFVSSDRSESSYQSYLSGM 102 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g---~~~~ii~i~~d~~~~~~~~~~~~~ 102 (190)
.+.|++.+++..+ .++++++|+|||+||++|+.+.|.+.++++.+++.+ .++.++.|+++.
T Consensus 7 v~~l~~~~f~~~~----~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~------------ 70 (382)
T 2r2j_A 7 ITSLDTENIDEIL----NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ------------ 70 (382)
T ss_dssp -CBCCTTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT------------
T ss_pred eEECCHHHHHHHH----hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc------------
Confidence 3456666665433 267899999999999999999999999999986431 248888888775
Q ss_pred CCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 103 PWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|+|.++||+++ + ++|
T Consensus 71 -----------~~~l~~~~~v~~~Pt~~~--f-~~G 92 (382)
T 2r2j_A 71 -----------HSDIAQRYRISKYPTLKL--F-RNG 92 (382)
T ss_dssp -----------CHHHHHHTTCCEESEEEE--E-ETT
T ss_pred -----------cHHHHHhcCCCcCCEEEE--E-eCC
Confidence 357899999999999999 7 467
No 196
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.35 E-value=6.2e-13 Score=85.84 Aligned_cols=60 Identities=18% Similarity=0.414 Sum_probs=50.8
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCC
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHG 125 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 125 (190)
.++++.||++||++|+...|.++++++++++ ++.++.++++.+ ..+.++|++.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~-----------------------~~~~~~~~v~~ 56 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMEN-----------------------PQKAMEYGIMA 56 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSS-----------------------CCTTTSTTTCC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCC-----------------------HHHHHHCCCcc
Confidence 4789999999999999999999999998863 488888988753 34577899999
Q ss_pred CCeeee
Q psy8729 126 IPSLIL 131 (190)
Q Consensus 126 ~P~~~l 131 (190)
+|++++
T Consensus 57 ~Pt~~~ 62 (85)
T 1fo5_A 57 VPTIVI 62 (85)
T ss_dssp SSEEEE
T ss_pred cCEEEE
Confidence 998766
No 197
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.34 E-value=2e-13 Score=98.71 Aligned_cols=78 Identities=8% Similarity=0.108 Sum_probs=53.7
Q ss_pred ccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHH--HHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCc
Q psy8729 34 VTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETY--RKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYAS 111 (190)
Q Consensus 34 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~--~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~ 111 (190)
.+..+.....++++++|+|||+||++|+.+.|.+.+.. .++.+. .++.|++|.+.
T Consensus 33 ~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~----~fv~V~vD~e~------------------- 89 (151)
T 3ph9_A 33 YEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN----KFIMLNLMHET------------------- 89 (151)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH----TCEEEEESSCC-------------------
T ss_pred HHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc----CeEEEEecCCc-------------------
Confidence 33444444447999999999999999999999887532 222221 25556665321
Q ss_pred hhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 112 ETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 112 ~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
......|++.++||+++ ++++|+
T Consensus 90 ---~~~~~~~~v~~~PT~~f--~~~~G~ 112 (151)
T 3ph9_A 90 ---TDKNLSPDGQYVPRIMF--VDPSLT 112 (151)
T ss_dssp ---SCGGGCTTCCCSSEEEE--ECTTSC
T ss_pred ---hhhHhhcCCCCCCEEEE--ECCCCC
Confidence 11245788999999999 999993
No 198
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.34 E-value=4.2e-12 Score=103.49 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=62.3
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~ 105 (190)
...+.+.++...+. .++++++|+||++||++|+.+.|.+.++++.+++. .++.++.|+.+.+.
T Consensus 251 v~~l~~~~f~~~~~---~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-~~v~~~~vd~~~~~------------- 313 (361)
T 3uem_A 251 VKVLVGKNFEDVAF---DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-ENIVIAKMDSTANE------------- 313 (361)
T ss_dssp SEEECTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTTCB-------------
T ss_pred cEEeecCchhhhcc---cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-CcEEEEEEECCccc-------------
Confidence 33455555544442 36889999999999999999999999999999865 35777777765321
Q ss_pred cccCCchhHHHHHHHcCCCCCCeeeeeeecCC
Q psy8729 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAG 137 (190)
Q Consensus 106 ~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~ 137 (190)
++.|+|.++|++++ +.++
T Consensus 314 ------------~~~~~v~~~Pt~~~--~~~~ 331 (361)
T 3uem_A 314 ------------VEAVKVHSFPTLKF--FPAS 331 (361)
T ss_dssp ------------CSSCCCCSSSEEEE--ECSS
T ss_pred ------------hhhcCCcccCeEEE--EECC
Confidence 46789999999999 8655
No 199
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.33 E-value=2.2e-12 Score=91.25 Aligned_cols=64 Identities=13% Similarity=0.231 Sum_probs=53.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.+++++|+||++||++|+.+.|.|.++++++. ++.++.|+++.. .+.|+|
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~--------------------------~~~~~i 78 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSC--------------------------IEHYHD 78 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSS--------------------------CSSCCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcC--------------------------cccCCC
Confidence 45799999999999999999999999998873 477888877642 158999
Q ss_pred CCCCeeeeeeecCCCce
Q psy8729 124 HGIPSLILLAVEAGGRL 140 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~ 140 (190)
.++||+++ ++ +|+.
T Consensus 79 ~~~Pt~~~--~~-~G~~ 92 (135)
T 2dbc_A 79 NCLPTIFV--YK-NGQI 92 (135)
T ss_dssp SCCSEEEE--ES-SSSC
T ss_pred CCCCEEEE--EE-CCEE
Confidence 99999999 85 7743
No 200
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.33 E-value=4.2e-12 Score=107.99 Aligned_cols=84 Identities=23% Similarity=0.434 Sum_probs=68.7
Q ss_pred ccceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCC
Q psy8729 24 TYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMP 103 (190)
Q Consensus 24 ~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~ 103 (190)
.....+++.+++..+ .++++++|.||++||++|+.+.|.+.++++.+++. ++.++.|+++.
T Consensus 14 ~~v~~l~~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~------------- 74 (504)
T 2b5e_A 14 SAVVKLATDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTE------------- 74 (504)
T ss_dssp SSCEECCTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTT-------------
T ss_pred CCcEECCHHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCC-------------
Confidence 345667777776543 36889999999999999999999999999998764 48888888775
Q ss_pred CCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 104 WPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|+|.++||+++ +. +|+
T Consensus 75 ----------~~~l~~~~~v~~~Pt~~~--~~-~g~ 97 (504)
T 2b5e_A 75 ----------NQDLCMEHNIPGFPSLKI--FK-NSD 97 (504)
T ss_dssp ----------CHHHHHHTTCCSSSEEEE--EE-TTC
T ss_pred ----------CHHHHHhcCCCcCCEEEE--Ee-CCc
Confidence 357899999999999999 75 453
No 201
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.33 E-value=1.3e-12 Score=110.38 Aligned_cols=81 Identities=23% Similarity=0.413 Sum_probs=63.7
Q ss_pred ccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCccc
Q psy8729 29 LAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIP 108 (190)
Q Consensus 29 l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~ 108 (190)
+.+.++...+. .++++++|+|||+||++|+.+.|.+.++++.+.+. .++.++.|+.+.+
T Consensus 357 ~~~~~~~~~~~---~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~v~~~~id~~~~----------------- 415 (481)
T 3f8u_A 357 VVAENFDEIVN---NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-PNIVIAKMDATAN----------------- 415 (481)
T ss_dssp ECTTTHHHHHT---CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTSS-----------------
T ss_pred ecccCHHHHhh---cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-CCEEEEEEECCch-----------------
Confidence 44444443332 25899999999999999999999999999999865 3588888877642
Q ss_pred CCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 109 YASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 109 ~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
.+.+.|++.++||+++ ++++|+
T Consensus 416 -------~~~~~~~v~~~Pt~~~--~~~~~~ 437 (481)
T 3f8u_A 416 -------DVPSPYEVRGFPTIYF--SPANKK 437 (481)
T ss_dssp -------CCCTTCCCCSSSEEEE--ECTTCT
T ss_pred -------hhHhhCCCcccCEEEE--EeCCCe
Confidence 3456899999999999 988774
No 202
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.32 E-value=6.5e-13 Score=85.74 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=49.7
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCC
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGI 126 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 126 (190)
++++.||++||++|+...|.++++++++++ ++.++.++++.+ ..+.+.||+.++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~-----------------------~~~~~~~~v~~~ 56 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVD-----------------------REKAIEYGLMAV 56 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTC-----------------------GGGGGGTCSSCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCC-----------------------HHHHHhCCceee
Confidence 368999999999999999999999999864 377888887753 356789999999
Q ss_pred Ceeee
Q psy8729 127 PSLIL 131 (190)
Q Consensus 127 P~~~l 131 (190)
|++++
T Consensus 57 Pt~~~ 61 (85)
T 1nho_A 57 PAIAI 61 (85)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98776
No 203
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.31 E-value=4.1e-12 Score=94.54 Aligned_cols=117 Identities=20% Similarity=0.241 Sum_probs=87.8
Q ss_pred CCcccceeccC--C---------Cc----cceeeeeccCCcEEEEEEE-cCCChhhh-hhhHHHHHHHHHH-hhcCCcE-
Q psy8729 21 AKKTYNIGLAE--G---------TV----TTKVLSYIESCQVIGLYFS-AHWCPPCK-AFTPQLIETYRKL-KEDGYQF- 81 (190)
Q Consensus 21 ~~~~~~~~l~~--~---------~~----~~~~~~~~~~~k~vlv~F~-a~wC~~C~-~~~~~l~~l~~~~-~~~g~~~- 81 (190)
+...|+|++.+ . ++ ....++.+..++++||+|| +.|||.|. .+++.+++.+.++ .+.| +
T Consensus 4 Gd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g--~~ 81 (182)
T 1xiy_A 4 NDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN--FD 81 (182)
T ss_dssp TCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC--CS
T ss_pred CCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC--Cc
Confidence 34567777765 2 33 3444444226777777776 89999999 9999999999999 7764 7
Q ss_pred EEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC-----------CCCeeeeeeecCCCceEEE
Q psy8729 82 EIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH-----------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 82 ~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~i~ 143 (190)
.+++||.| +....++|.++++...++++.|.+..++++||+. .....++ || +|+++.+
T Consensus 82 ~V~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfv--Id-dG~V~~~ 150 (182)
T 1xiy_A 82 DIYCITNN-DIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAI--VE-NNILVKM 150 (182)
T ss_dssp EEEEEESS-CHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEE--EE-TTEEEEE
T ss_pred EEEEEeCC-CHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEE--Ec-CCEEEEE
Confidence 48999998 6777888988887546899999999999999973 2467788 98 9954433
No 204
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.31 E-value=1.4e-12 Score=101.45 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=54.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
+++++||+||++||++|+.+.|.|.+++++|+ ++.++.|+++. ..++..|++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~----~v~f~kVd~d~------------------------~~l~~~~~I 183 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP----MVKFCKIKASN------------------------TGAGDRFSS 183 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT----TSEEEEEEHHH------------------------HCCTTSSCT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CCEEEEEeCCc------------------------HHHHHHCCC
Confidence 58899999999999999999999999999885 36777776641 235678999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++||+++ +. +|+
T Consensus 184 ~~~PTll~--~~-~G~ 196 (245)
T 1a0r_P 184 DVLPTLLV--YK-GGE 196 (245)
T ss_dssp TTCSEEEE--EE-TTE
T ss_pred CCCCEEEE--EE-CCE
Confidence 99999999 75 783
No 205
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.31 E-value=1.1e-12 Score=93.90 Aligned_cols=78 Identities=14% Similarity=0.270 Sum_probs=51.8
Q ss_pred eccCCCccceeeeeccCCcEEEEEEEcCC--ChhhhhhhHHHHHHHHHHhhcCCcEE--EEEeeCCCCHHHHHHHHhCCC
Q psy8729 28 GLAEGTVTTKVLSYIESCQVIGLYFSAHW--CPPCKAFTPQLIETYRKLKEDGYQFE--IIFVSSDRSESSYQSYLSGMP 103 (190)
Q Consensus 28 ~l~~~~~~~~~~~~~~~~k~vlv~F~a~w--C~~C~~~~~~l~~l~~~~~~~g~~~~--ii~i~~d~~~~~~~~~~~~~~ 103 (190)
.+++.+++..+. +++.++|+||++| |++|+.+.|.|.+++++| ++ +. ++.|++|.
T Consensus 21 ~l~~~~f~~~i~----~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~------------- 79 (142)
T 2es7_A 21 PVEASTVDDWIK----RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQ------------- 79 (142)
T ss_dssp ECCCC------------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHH-------------
T ss_pred ccccccHHHHHH----hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCC-------------
Confidence 345555554443 3445788899887 999999999999999988 43 55 77776653
Q ss_pred CCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 104 WPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|+|.++||+++ + ++|+
T Consensus 80 ----------~~~la~~~~V~~iPT~~~--f-k~G~ 102 (142)
T 2es7_A 80 ----------SEAIGDRFNVRRFPATLV--F-TDGK 102 (142)
T ss_dssp ----------HHHHHHTTTCCSSSEEEE--E-SCC-
T ss_pred ----------CHHHHHhcCCCcCCeEEE--E-eCCE
Confidence 568899999999999999 8 7883
No 206
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.30 E-value=3.8e-12 Score=103.60 Aligned_cols=80 Identities=20% Similarity=0.291 Sum_probs=62.9
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHH-------HHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHH
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQ-------LIETYRKLKEDGYQFEIIFVSSDRSESSYQSYL 99 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~-------l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~ 99 (190)
+.|++.+++..+ .++++++|+|||+||+ |+.+.|. +.++++.+.+. ++.+..|+++.
T Consensus 14 ~~l~~~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~--------- 77 (350)
T 1sji_A 14 VSLTEKNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKK--------- 77 (350)
T ss_dssp EEECHHHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTT---------
T ss_pred EECCHHHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCC---------
Confidence 344444444332 3678999999999999 9999999 88888888764 48888888875
Q ss_pred hCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 100 SGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
...++++|+|.++||+++ + ++|+
T Consensus 78 --------------~~~l~~~~~v~~~Pt~~~--~-~~g~ 100 (350)
T 1sji_A 78 --------------EAKLAKKLGFDEEGSLYV--L-KGDR 100 (350)
T ss_dssp --------------THHHHHHHTCCSTTEEEE--E-ETTE
T ss_pred --------------CHHHHHhcCCCccceEEE--E-ECCc
Confidence 357899999999999999 8 5673
No 207
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.30 E-value=9.7e-12 Score=91.57 Aligned_cols=121 Identities=11% Similarity=0.160 Sum_probs=91.5
Q ss_pred CCCCCCcccceeccCCC-ccceeeeeccCCcEEEEEEE-cCCChhhhhhhHHHHHHHHHHhhcCCcEE-EEEeeCCCCHH
Q psy8729 17 GSKGAKKTYNIGLAEGT-VTTKVLSYIESCQVIGLYFS-AHWCPPCKAFTPQLIETYRKLKEDGYQFE-IIFVSSDRSES 93 (190)
Q Consensus 17 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~g~~~~-ii~i~~d~~~~ 93 (190)
....+..+|+|++.+.. +....++.+..++++||+|| +.|||.|..+++.+++.+.++.+.| ++ +++||.| +..
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g--v~~VigIS~D-~~~ 89 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG--YHTIACIAVN-DPF 89 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT--CCEEEEEESS-CHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CCEEEEEeCC-CHH
Confidence 34446677888887433 14455555336788888887 7899999999999999999999874 75 9999998 677
Q ss_pred HHHHHHhCCCC-CcccCCchhHHHHHHHcCCC-----------CCCeeeeeeecCCCceEEE
Q psy8729 94 SYQSYLSGMPW-PAIPYASETRQSLASLYNVH-----------GIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~-----------~~P~~~l~~id~~g~~~i~ 143 (190)
..++|.++.+. ..++++.|.+..++++||+. ..-.+++ || +|+++.+
T Consensus 90 ~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfv--Id-dG~V~~~ 148 (171)
T 2xhf_A 90 VMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAML--ID-DNKIRSV 148 (171)
T ss_dssp HHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEE--EE-TTEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEE--Ee-CCEEEEE
Confidence 78888887764 36899999999999999974 2346688 98 9954433
No 208
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.29 E-value=9.6e-12 Score=94.77 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=56.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcC-CcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDG-YQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g-~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.+++++|.||++||++|+.+.|.+++++++++++| .++.++.|+++. +..+++.|+
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~ 189 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-----------------------YPEWADQYN 189 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-----------------------CHHHHHhCC
Confidence 34455999999999999999999999999987321 248888887764 357889999
Q ss_pred CCCCCeeeeeeecCCCc
Q psy8729 123 VHGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~ 139 (190)
|.++|++++ + ++|+
T Consensus 190 v~~~Pt~~~--~-~~G~ 203 (226)
T 1a8l_A 190 VMAVPKIVI--Q-VNGE 203 (226)
T ss_dssp CCSSCEEEE--E-ETTE
T ss_pred CcccCeEEE--E-eCCc
Confidence 999999888 6 5773
No 209
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.29 E-value=1.3e-11 Score=84.19 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=60.2
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++|+|+|+||++|+...|.++++.+. . ++.++.|.+|...+ ..+.++..||
T Consensus 22 ~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~-------------------~Sn~IA~~~~ 77 (112)
T 3iv4_A 22 EENKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERD-------------------LSDYIAKKTN 77 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHH-------------------HHHHHHHHHT
T ss_pred hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCch-------------------hhHHHHHHhC
Confidence 3588999999999999999999999998874 2 37788888875431 1367899999
Q ss_pred CC-CCCeeeeeeecCCCceEEEccc
Q psy8729 123 VH-GIPSLILLAVEAGGRLDVITTE 146 (190)
Q Consensus 123 v~-~~P~~~l~~id~~g~~~i~~~~ 146 (190)
|. ..|++++ + ++| +.+...
T Consensus 78 V~h~sPq~il--~-k~G--~~v~~~ 97 (112)
T 3iv4_A 78 VKHESPQAFY--F-VNG--EMVWNR 97 (112)
T ss_dssp CCCCSSEEEE--E-ETT--EEEEEE
T ss_pred CccCCCeEEE--E-ECC--EEEEEe
Confidence 99 6999999 8 788 555443
No 210
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.28 E-value=4e-13 Score=93.68 Aligned_cols=66 Identities=27% Similarity=0.610 Sum_probs=56.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++. ...++++|++
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~-----------------------~~~~~~~~~v 87 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDE-----------------------LKEVAEKYNV 87 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTT-----------------------SGGGHHHHTC
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccc-----------------------hHHHHHHcCC
Confidence 58899999999999999999999999998875 36777777764 3467889999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++|++++ + ++|+
T Consensus 88 ~~~Pt~~~--~-~~g~ 100 (130)
T 1wmj_A 88 EAMPTFLF--I-KDGA 100 (130)
T ss_dssp CSSCCCCB--C-TTTT
T ss_pred CccceEEE--E-eCCe
Confidence 99999988 7 6783
No 211
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.28 E-value=2.1e-11 Score=77.27 Aligned_cols=62 Identities=13% Similarity=0.248 Sum_probs=49.5
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
..|.||++||++|+.+.|.++++++++.. ++.++.|+ + ..+.++|++.++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~-~-------------------------~~~~~~~~v~~~P 52 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK-E-------------------------MDQILEAGLTALP 52 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC-S-------------------------HHHHHHHTCSSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec-C-------------------------HHHHHHCCCCcCC
Confidence 35899999999999999999999988764 36776665 1 4678899999999
Q ss_pred eeeeeeecCCCceEEEcc
Q psy8729 128 SLILLAVEAGGRLDVITT 145 (190)
Q Consensus 128 ~~~l~~id~~g~~~i~~~ 145 (190)
++++ +| +++..
T Consensus 53 t~~~-----~G--~~~~~ 63 (77)
T 1ilo_A 53 GLAV-----DG--ELKIM 63 (77)
T ss_dssp CEEE-----TT--EEEEC
T ss_pred EEEE-----CC--EEEEc
Confidence 8766 68 55544
No 212
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.27 E-value=6.6e-12 Score=106.10 Aligned_cols=82 Identities=21% Similarity=0.392 Sum_probs=65.8
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
+.|++.+++..+.+. ..+++++|+||++||++|+.+.|.+.++++.+++. +.++.|+++.
T Consensus 4 ~~l~~~~f~~~i~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~---------------- 63 (481)
T 3f8u_A 4 LELTDDNFESRISDT-GSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI---VPLAKVDCTA---------------- 63 (481)
T ss_dssp EEECTTTHHHHTTCC-SSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CCEEEEETTT----------------
T ss_pred EEecHHHHHHHHHhC-CCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---eEEEEEECCC----------------
Confidence 456666666555321 23489999999999999999999999999998764 7788888775
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|+|.++||+++ + ++|
T Consensus 64 -------~~~l~~~~~v~~~Ptl~~--~-~~g 85 (481)
T 3f8u_A 64 -------NTNTCNKYGVSGYPTLKI--F-RDG 85 (481)
T ss_dssp -------CHHHHHHTTCCEESEEEE--E-ETT
T ss_pred -------CHHHHHhcCCCCCCEEEE--E-eCC
Confidence 358899999999999999 7 567
No 213
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.27 E-value=2.4e-11 Score=94.25 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=53.4
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcC-CcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDG-YQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g-~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.++++++.||++||++|+.+.|.+++++..++..+ +++.+..|+++. ...++++|+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~~~~~ 193 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-----------------------NPDIADKYG 193 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-----------------------CHHHHHHcC
Confidence 47788999999999999999999999999985211 358888887764 356788999
Q ss_pred CCCCCeeee
Q psy8729 123 VHGIPSLIL 131 (190)
Q Consensus 123 v~~~P~~~l 131 (190)
|.++|++++
T Consensus 194 V~~vPt~~i 202 (243)
T 2hls_A 194 VMSVPSIAI 202 (243)
T ss_dssp CCSSSEEEE
T ss_pred CeeeCeEEE
Confidence 999999876
No 214
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.23 E-value=9.2e-13 Score=89.62 Aligned_cols=64 Identities=16% Similarity=0.389 Sum_probs=46.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.+++++|+|||+||++|+.+.|.+.+++++++ .+-+..+... +....++++|+|
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~-------------------~~~~~l~~~~~V 64 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPG-------------------TPQAQECTEAGI 64 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTT-------------------SCCCHHHHHTTC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEeccccc-------------------chhHHHHHHcCC
Confidence 46677899999999999999999988875542 3333332210 014688999999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|| ++ + +|
T Consensus 65 ~~~PT-~~--i--~G 74 (106)
T 3kp8_A 65 TSYPT-WI--I--NG 74 (106)
T ss_dssp CSSSE-EE--E--TT
T ss_pred eEeCE-EE--E--CC
Confidence 99999 45 5 67
No 215
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.23 E-value=1e-12 Score=90.68 Aligned_cols=70 Identities=17% Similarity=0.253 Sum_probs=49.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
+...++|+||++||++|+.+.+.+...++.... +..+.++.|+++.+. ...++..|+|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~---------------------~~~la~~~~V 74 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPL---------------------PPGLELARPV 74 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCC---------------------CTTCBCSSCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCC---------------------chhHHHHCCC
Confidence 566799999999999999998766543322110 112567778877532 1345678899
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++||+++ ++ +|
T Consensus 75 ~g~PT~i~--f~-~G 86 (116)
T 3dml_A 75 TFTPTFVL--MA-GD 86 (116)
T ss_dssp CSSSEEEE--EE-TT
T ss_pred CCCCEEEE--EE-CC
Confidence 99999999 87 88
No 216
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.21 E-value=1.5e-11 Score=104.53 Aligned_cols=82 Identities=18% Similarity=0.372 Sum_probs=59.6
Q ss_pred eeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCc
Q psy8729 27 IGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106 (190)
Q Consensus 27 ~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~ 106 (190)
..+++.++...+. ..+++++|+|||+||++|+.+.|.+.++++.+...+.++.++.++.+.+.
T Consensus 361 ~~l~~~~f~~~v~---~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-------------- 423 (504)
T 2b5e_A 361 FQLVGKNHDEIVN---DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND-------------- 423 (504)
T ss_dssp EEECTTTHHHHHH---CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC--------------
T ss_pred eecccccHHHhhc---cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc--------------
Confidence 3445555444332 25889999999999999999999999999998732235777777665321
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
... |+|.++||+++ + ++|+
T Consensus 424 ----------~~~-~~v~~~Pt~~~--~-~~G~ 442 (504)
T 2b5e_A 424 ----------VRG-VVIEGYPTIVL--Y-PGGK 442 (504)
T ss_dssp ----------CSS-CCCSSSSEEEE--E-CCTT
T ss_pred ----------ccc-CCceecCeEEE--E-eCCc
Confidence 123 89999999999 7 5663
No 217
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.20 E-value=4.8e-11 Score=97.87 Aligned_cols=82 Identities=11% Similarity=0.077 Sum_probs=63.3
Q ss_pred cceeccCCCccceeeeeccCCcEEEEEEEcCCChhhhhhh------HHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHH
Q psy8729 25 YNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFT------PQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98 (190)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~------~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~ 98 (190)
..+.|++.+++..+ .++++++|+|||+||++|+... |.++++++.+.+. ++.+..|+++.
T Consensus 14 ~v~~lt~~~f~~~i----~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~v~~~~Vd~~~-------- 79 (367)
T 3us3_A 14 RVINVNAKNYKNVF----KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--GVGFGLVDSEK-------- 79 (367)
T ss_dssp CCEECCTTTHHHHH----HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--TEEEEEEETTT--------
T ss_pred ccEECCHHHHHHHH----hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--CceEEEEeCcc--------
Confidence 34567777766544 2678999999999999973332 5788888888653 58888888875
Q ss_pred HhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
...++++|+|.++||+++ +. +|
T Consensus 80 ---------------~~~l~~~~~V~~~PTl~~--f~-~G 101 (367)
T 3us3_A 80 ---------------DAAVAKKLGLTEEDSIYV--FK-ED 101 (367)
T ss_dssp ---------------THHHHHHHTCCSTTEEEE--EE-TT
T ss_pred ---------------cHHHHHHcCCCcCceEEE--EE-CC
Confidence 358899999999999999 74 67
No 218
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.20 E-value=6.4e-12 Score=96.04 Aligned_cols=65 Identities=12% Similarity=0.220 Sum_probs=54.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.++++||+||++||++|+.+.|.|.+++++|+ ++.++.|+++ +..++..|++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~------------------------~~~l~~~~~i 170 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS------------------------NTGAGDRFSS 170 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH------------------------HHTCSTTSCG
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC------------------------cHHHHHHCCC
Confidence 46899999999999999999999999998874 3677777765 2345778999
Q ss_pred CCCCeeeeeeecCCCc
Q psy8729 124 HGIPSLILLAVEAGGR 139 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~ 139 (190)
.++||+++ +. +|+
T Consensus 171 ~~~PTl~~--~~-~G~ 183 (217)
T 2trc_P 171 DVLPTLLV--YK-GGE 183 (217)
T ss_dssp GGCSEEEE--EE-TTE
T ss_pred CCCCEEEE--EE-CCE
Confidence 99999999 74 783
No 219
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.10 E-value=2e-10 Score=87.76 Aligned_cols=61 Identities=15% Similarity=0.240 Sum_probs=51.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.+++++|+||++||++|+.+.|.+++++++++ ++.++.|+++. ...+++.|++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~-----------------------~~~l~~~~~v 187 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASE-----------------------NQDLAEQFQV 187 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGG-----------------------CHHHHHHTTC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCC-----------------------CHHHHHHcCC
Confidence 45556889999999999999999999998872 48888887764 3578999999
Q ss_pred CCCCeeee
Q psy8729 124 HGIPSLIL 131 (190)
Q Consensus 124 ~~~P~~~l 131 (190)
.++|++++
T Consensus 188 ~~~Pt~~~ 195 (229)
T 2ywm_A 188 VGVPKIVI 195 (229)
T ss_dssp CSSSEEEE
T ss_pred cccCEEEE
Confidence 99999776
No 220
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.08 E-value=3.5e-10 Score=81.78 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=58.1
Q ss_pred CCccceeeeeccCCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCccc
Q psy8729 32 GTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIP 108 (190)
Q Consensus 32 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~ 108 (190)
++.++.+.....++|+++|+|+++||..|+.+.... .++.+.+.+. +.++.++++..+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~---------------- 89 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEE---------------- 89 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHH----------------
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHh----------------
Confidence 344444433334699999999999999999996544 3344444433 677777665322
Q ss_pred CCchhHHHHHHHcCCCCCCeeeeeeecCC-C
Q psy8729 109 YASETRQSLASLYNVHGIPSLILLAVEAG-G 138 (190)
Q Consensus 109 ~~~~~~~~~~~~~~v~~~P~~~l~~id~~-g 138 (190)
...+.+.|++.++|++++ +|++ |
T Consensus 90 -----~~~l~~~y~v~~~P~~~f--ld~~~G 113 (153)
T 2dlx_A 90 -----GQRYIQFYKLGDFPYVSI--LDPRTG 113 (153)
T ss_dssp -----HHHHHHHHTCCSSSEEEE--ECTTTC
T ss_pred -----HHHHHHHcCCCCCCEEEE--EeCCCC
Confidence 567889999999999999 9998 7
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.07 E-value=3.7e-10 Score=100.68 Aligned_cols=66 Identities=21% Similarity=0.416 Sum_probs=57.7
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.. ..+++.||+
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~---~v~~~~vd~~~~-----------------------~~~~~~~~v 507 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG---QLKVGTLDCTIH-----------------------EGLCNMYNI 507 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC-----------------------HHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEeCCCC-----------------------HHHHHHcCC
Confidence 678999999999999999999999999999975 388888887743 468899999
Q ss_pred CCCCeeeeeeecCCC
Q psy8729 124 HGIPSLILLAVEAGG 138 (190)
Q Consensus 124 ~~~P~~~l~~id~~g 138 (190)
.++|++++ ++ +|
T Consensus 508 ~~~Pt~~~--~~-~g 519 (780)
T 3apo_A 508 QAYPTTVV--FN-QS 519 (780)
T ss_dssp CSSSEEEE--EE-TT
T ss_pred CcCCeEEE--Ec-CC
Confidence 99999999 84 56
No 222
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.05 E-value=2.3e-10 Score=102.09 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=58.5
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
..+++++|+||++||++|+.+.|.+.++++++.+ ++.++.|+++. ...+++.|+
T Consensus 673 ~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~---~~~~~~vd~~~-----------------------~~~~~~~~~ 726 (780)
T 3apo_A 673 QGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG---KVRAGKVDCQA-----------------------YPQTCQKAG 726 (780)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CceEEEEECCC-----------------------CHHHHHhcC
Confidence 3688999999999999999999999999999865 37888888765 357889999
Q ss_pred CCCCCeeeeeeecCCCc
Q psy8729 123 VHGIPSLILLAVEAGGR 139 (190)
Q Consensus 123 v~~~P~~~l~~id~~g~ 139 (190)
|.++|++++ + ++|+
T Consensus 727 v~~~Pt~~~--~-~~g~ 740 (780)
T 3apo_A 727 IKAYPSVKL--Y-QYER 740 (780)
T ss_dssp CCSSSEEEE--E-EEET
T ss_pred CCcCCEEEE--E-cCCC
Confidence 999999999 8 5663
No 223
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.99 E-value=1.4e-09 Score=83.04 Aligned_cols=66 Identities=12% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCcEEEEEE----EcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHH
Q psy8729 44 SCQVIGLYF----SAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLAS 119 (190)
Q Consensus 44 ~~k~vlv~F----~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
.+.++++.| |++||++|+.+.|.+.++++++.+. ..+.+..|+++. +..+++
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-~~v~~~~vd~~~-----------------------~~~l~~ 75 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-DKIKLDIYSPFT-----------------------HKEETE 75 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-TTEEEEEECTTT-----------------------CHHHHH
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-CceEEEEecCcc-----------------------cHHHHH
Confidence 455555555 5899999999999999998888542 358888887764 468999
Q ss_pred HcCCCCCCeeeeeeec
Q psy8729 120 LYNVHGIPSLILLAVE 135 (190)
Q Consensus 120 ~~~v~~~P~~~l~~id 135 (190)
+|+|.++||+++ ++
T Consensus 76 ~~~v~~~Ptl~~--~~ 89 (229)
T 2ywm_A 76 KYGVDRVPTIVI--EG 89 (229)
T ss_dssp HTTCCBSSEEEE--ES
T ss_pred HcCCCcCcEEEE--EC
Confidence 999999999999 74
No 224
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.97 E-value=2.6e-09 Score=83.07 Aligned_cols=84 Identities=17% Similarity=0.173 Sum_probs=65.1
Q ss_pred CcccceeccCCCccceeeeeccCCcEEEEEEE--cCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC--CHHHHHH
Q psy8729 22 KKTYNIGLAEGTVTTKVLSYIESCQVIGLYFS--AHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR--SESSYQS 97 (190)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~~~k~vlv~F~--a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~--~~~~~~~ 97 (190)
.......+++.+++..+ .++++++|+|| |+||+ +.|.+.++++.+.+...++.+..|+++. +++
T Consensus 14 ~~~~v~~Lt~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~---- 81 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTV----ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELE---- 81 (248)
T ss_dssp -CTTCEECCTTTHHHHH----TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCT----
T ss_pred CCCCcEECCHHHHHHHH----hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccc----
Confidence 34455677888877633 36789999999 99998 9999999999997611468898898875 110
Q ss_pred HHhCCCCCcccCCchhHHHHHHHcCCC--CCCeeeeeeec
Q psy8729 98 YLSGMPWPAIPYASETRQSLASLYNVH--GIPSLILLAVE 135 (190)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~l~~id 135 (190)
+..+++.|+|. ++||+++ +.
T Consensus 82 ----------------n~~la~~~~V~~~~~PTl~~--F~ 103 (248)
T 2c0g_A 82 ----------------NKALGDRYKVDDKNFPSIFL--FK 103 (248)
T ss_dssp ----------------THHHHHHTTCCTTSCCEEEE--ES
T ss_pred ----------------cHHHHHHhCCCcCCCCeEEE--Ee
Confidence 36899999999 9999999 64
No 225
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.96 E-value=5.1e-10 Score=71.71 Aligned_cols=58 Identities=19% Similarity=0.346 Sum_probs=41.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.||++||++|+...+.++++.+++. ..+..+.++.+.+ ...+.+.||+.++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~~v~~~~~--------------------~~~~~~~~gv~~vPt 58 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-----YTVEIVHLGTDKA--------------------RIAEAEKAGVKSVPA 58 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-----EEEEEEETTTCSS--------------------THHHHHHHTCCEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-----CeEEEEEecCChh--------------------hHHHHHHcCCCcCCE
Confidence 678999999999999999987765542 3344444443210 246678899999998
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 59 ~~i 61 (80)
T 2k8s_A 59 LVI 61 (80)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 226
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.96 E-value=3e-09 Score=80.90 Aligned_cols=82 Identities=15% Similarity=0.287 Sum_probs=54.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC----CH---------------HHHHHHHhCCCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR----SE---------------SSYQSYLSGMPW 104 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~----~~---------------~~~~~~~~~~~~ 104 (190)
+++++|+.||++|||+|+.+.|.|.++.+. ++.++.+.... .. ..+..++.+.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 158 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV 158 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCC
Confidence 678999999999999999999999887542 25565554321 11 123333433332
Q ss_pred C--cccCCchhHHHHHHHcCCCCCCeeee
Q psy8729 105 P--AIPYASETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 105 ~--~~~~~~~~~~~~~~~~~v~~~P~~~l 131 (190)
. ......+.+..+.+.||+.++|++++
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gtPt~v~ 187 (216)
T 1eej_A 159 APASCDVDIADHYALGVQLGVSGTPAVVL 187 (216)
T ss_dssp CCCCCSCCHHHHHHHHHHHTCCSSSEEEC
T ss_pred ChhHHHHHHHHHHHHHHHcCCCccCEEEE
Confidence 1 11223445678899999999999976
No 227
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.96 E-value=2.8e-09 Score=79.51 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=37.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
.++++|+.||++|||+|+.+.|.+.++.+++.+ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 688999999999999999999999999888765 3677777664
No 228
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.94 E-value=2.5e-09 Score=81.28 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCcEEEEEEEcC-CChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 44 SCQVIGLYFSAH-WCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 44 ~~k~vlv~F~a~-wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
++++++++||++ ||++|+.+.|.+.++++. . .++.+..|+++..+ ...++++||
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~---~~v~~~~vd~~~~~---------------------~~~~~~~~~ 75 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T---DKLSYEIVDFDTPE---------------------GKELAKRYR 75 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C---TTEEEEEEETTSHH---------------------HHHHHHHTT
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C---CceEEEEEeCCCcc---------------------cHHHHHHcC
Confidence 567888999999 999999999999998754 2 35888888877422 368899999
Q ss_pred CCCCCeeeeeeecCCC
Q psy8729 123 VHGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v~~~P~~~l~~id~~g 138 (190)
+.++|++++ +. +|
T Consensus 76 v~~~Pt~~~--~~-~g 88 (226)
T 1a8l_A 76 IDRAPATTI--TQ-DG 88 (226)
T ss_dssp CCSSSEEEE--EE-TT
T ss_pred CCcCceEEE--Ec-CC
Confidence 999999999 73 44
No 229
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.90 E-value=9.4e-09 Score=75.18 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=32.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEee
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVS 87 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~ 87 (190)
.++++|+.||.+|||+|+.+.|.+.++.+++.+ +.++...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----v~~~~~~ 60 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN----VRLVYRE 60 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC----EEEEEEe
Confidence 688999999999999999999999998887532 4454444
No 230
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.89 E-value=3.5e-09 Score=71.86 Aligned_cols=63 Identities=22% Similarity=0.355 Sum_probs=49.6
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCC
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGI 126 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 126 (190)
..++.||++||++|+...+.|.++.+++. +.+..|++|.+ .++..+||+. +
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-----i~~~~vDId~d-----------------------~~l~~~ygv~-V 80 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-----FELEVINIDGN-----------------------EHLTRLYNDR-V 80 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-----CCCEEEETTTC-----------------------HHHHHHSTTS-C
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-----CeEEEEECCCC-----------------------HHHHHHhCCC-C
Confidence 46899999999999999999999887752 55667777753 4677889997 9
Q ss_pred CeeeeeeecCCCceEEE
Q psy8729 127 PSLILLAVEAGGRLDVI 143 (190)
Q Consensus 127 P~~~l~~id~~g~~~i~ 143 (190)
|++++ + .+| +.+
T Consensus 81 P~l~~--~-~dG--~~v 92 (107)
T 2fgx_A 81 PVLFA--V-NED--KEL 92 (107)
T ss_dssp SEEEE--T-TTT--EEE
T ss_pred ceEEE--E-ECC--EEE
Confidence 99987 5 367 554
No 231
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.89 E-value=1.2e-09 Score=76.88 Aligned_cols=66 Identities=11% Similarity=0.116 Sum_probs=55.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.+.+++|+||++ |.+|+.+.|.+.+++++|+++ +.++.++.|. .+.++..||+
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~-----------------------~~~~a~~~gi 74 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKA-----------------------FGAHAGNLNL 74 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTT-----------------------TGGGTTTTTC
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHH-----------------------hHHHHHHcCC
Confidence 677899999999 889999999999999998765 7788887764 3457889999
Q ss_pred CC--CCeeeeeeecC-CC
Q psy8729 124 HG--IPSLILLAVEA-GG 138 (190)
Q Consensus 124 ~~--~P~~~l~~id~-~g 138 (190)
.+ +|++++ ++. +|
T Consensus 75 ~~~~iPtl~i--~~~~~g 90 (133)
T 2djk_A 75 KTDKFPAFAI--QEVAKN 90 (133)
T ss_dssp CSSSSSEEEE--ECTTTC
T ss_pred CcccCCEEEE--EecCcC
Confidence 99 999999 864 45
No 232
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.88 E-value=4.4e-09 Score=71.72 Aligned_cols=68 Identities=19% Similarity=0.372 Sum_probs=45.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
+++.+++ ||++||++|+.+.|.|.++.. .+.++.|+.+.+... ....+.+.|++
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~~------------------~~~~l~~~~~v 71 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGSQ------------------LQSALAHWTGR 71 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHHH------------------HHHHHHHHHSC
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChHH------------------HHHHHHHHhCC
Confidence 3455555 999999999999999976532 244555544432110 12567889999
Q ss_pred CCCCeeeeeeecCCCceEEEc
Q psy8729 124 HGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 124 ~~~P~~~l~~id~~g~~~i~~ 144 (190)
.++|++ + + +| +.+.
T Consensus 72 ~~~Pt~-~--~--~g--~~v~ 85 (116)
T 2e7p_A 72 GTVPNV-F--I--GG--KQIG 85 (116)
T ss_dssp CSSCEE-E--E--TT--EEEE
T ss_pred CCcCEE-E--E--CC--EEEC
Confidence 999999 5 5 47 4443
No 233
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.84 E-value=9.9e-09 Score=79.40 Aligned_cols=82 Identities=11% Similarity=0.141 Sum_probs=63.0
Q ss_pred ceeccCCCccceeeeeccCCcEEEEEEEc--CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC--CHHHHHHHHhC
Q psy8729 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSA--HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR--SESSYQSYLSG 101 (190)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~k~vlv~F~a--~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~--~~~~~~~~~~~ 101 (190)
.+.|++.+++..+ ..+++++|+||+ +||+ +.|.+.++++.+.+. +++.+..|++|+ ..+
T Consensus 7 v~~Lt~~nF~~~i----~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-~~v~~akVDvd~~g~~~-------- 69 (240)
T 2qc7_A 7 ALPLDTVTFYKVI----PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-DDLLVAEVGISDYGDKL-------- 69 (240)
T ss_dssp CEECCTTHHHHHG----GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-TTEEEEEECCCCSSSCC--------
T ss_pred ceECCHHHHHHHH----cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-CCeEEEEEeCCcccchh--------
Confidence 3456666666533 257899999999 9999 999999999998753 468888888663 111
Q ss_pred CCCCcccCCchhHHHHHHHcCCC--CCCeeeeeeecCCCc
Q psy8729 102 MPWPAIPYASETRQSLASLYNVH--GIPSLILLAVEAGGR 139 (190)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~l~~id~~g~ 139 (190)
+..+++.|+|. ++||+++ + ++|+
T Consensus 70 ------------~~~l~~~~~V~~~~~PTl~~--f-~~G~ 94 (240)
T 2qc7_A 70 ------------NMELSEKYKLDKESYPVFYL--F-RDGD 94 (240)
T ss_dssp ------------SHHHHHHTTCCGGGCSEEEE--E-ETTC
T ss_pred ------------hHHHHHHcCCCCCCCCEEEE--E-eCCC
Confidence 46899999999 9999999 7 4563
No 234
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.81 E-value=2.6e-08 Score=73.99 Aligned_cols=42 Identities=21% Similarity=0.368 Sum_probs=35.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.||++|||+|+.+.|.+.++.+++.++ +.+..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPAD---VHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCC---eEEEEEeh
Confidence 6889999999999999999999999998887653 55555544
No 235
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.80 E-value=4.4e-09 Score=68.72 Aligned_cols=51 Identities=20% Similarity=0.254 Sum_probs=39.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.||++||++|+...|.|.++..++ +..|++|.+ +++.++||+. +|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~-----------------------~~l~~~~g~~-vPt 50 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDD-----------------------AALESAYGLR-VPV 50 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTC-----------------------HHHHHHHTTT-CSE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCC-----------------------HHHHHHhCCC-cCe
Confidence 78999999999999999997643321 355677653 4678889998 998
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 51 l~~ 53 (87)
T 1ttz_A 51 LRD 53 (87)
T ss_dssp EEC
T ss_pred EEE
Confidence 875
No 236
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.77 E-value=1.2e-08 Score=65.58 Aligned_cols=60 Identities=17% Similarity=0.306 Sum_probs=44.6
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC--CCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN--VHGI 126 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~ 126 (190)
++.||++|||+|+...+.|.++.++++ ++.+..++++.+.+ ....+.+.+| +.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~-------------------~~~~l~~~~~~~~~~v 59 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGI-------------------TKEDLQQKAGKPVETV 59 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTC-------------------CSHHHHHHTCCCSCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChH-------------------HHHHHHHHhCCCCcee
Confidence 678999999999999999999888753 26666666542110 0146788888 8999
Q ss_pred Ceeee
Q psy8729 127 PSLIL 131 (190)
Q Consensus 127 P~~~l 131 (190)
|++++
T Consensus 60 P~i~~ 64 (85)
T 1ego_A 60 PQIFV 64 (85)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 99844
No 237
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.74 E-value=3.2e-08 Score=73.52 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=35.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.||.+|||+|..+.|.|.++.++++. ++.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 578999999999999999999999999888754 366665554
No 238
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.69 E-value=9.8e-09 Score=68.70 Aligned_cols=59 Identities=20% Similarity=0.258 Sum_probs=43.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
...++++.||++||++|+...+.|.++.+ ++.+..++++... +..+.+.||
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~-------~i~~~~vdi~~~~---------------------~~el~~~~g- 64 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD-------RFILQEVDITLPE---------------------NSTWYERYK- 64 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS-------SSEEEEEETTSST---------------------THHHHHHSS-
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh-------CCeEEEEECCCcc---------------------hHHHHHHHC-
Confidence 45567889999999999999999975432 2556667776212 367788999
Q ss_pred CCCCeeee
Q psy8729 124 HGIPSLIL 131 (190)
Q Consensus 124 ~~~P~~~l 131 (190)
.++|++++
T Consensus 65 ~~vP~l~~ 72 (100)
T 1wjk_A 65 FDIPVFHL 72 (100)
T ss_dssp SSCSEEEE
T ss_pred CCCCEEEE
Confidence 99997644
No 239
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.69 E-value=5.5e-08 Score=83.11 Aligned_cols=61 Identities=13% Similarity=0.105 Sum_probs=51.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
.++..++.||++||++|+...|.+++++..++ ++.+..++.+. .+++.++|++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~-----------------------~~~~~~~~~i 168 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGT-----------------------FQNEITERNV 168 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechh-----------------------hHHHHHHhCC
Confidence 46678999999999999999999999988764 47787787764 4678999999
Q ss_pred CCCCeeee
Q psy8729 124 HGIPSLIL 131 (190)
Q Consensus 124 ~~~P~~~l 131 (190)
.++|++++
T Consensus 169 ~svPt~~i 176 (521)
T 1hyu_A 169 MGVPAVFV 176 (521)
T ss_dssp CSSSEEEE
T ss_pred CccCEEEE
Confidence 99999865
No 240
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.64 E-value=1.3e-07 Score=71.55 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=52.7
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC--C--CH---------------HHHHHHHhCCCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD--R--SE---------------SSYQSYLSGMPW 104 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d--~--~~---------------~~~~~~~~~~~~ 104 (190)
.++++|+.||++|||+|+.+.|.+.++.+ .+ +.+..+... . .. ..+..+....+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LG--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TT--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CC--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 57899999999999999999999987543 22 455444332 1 11 112222222211
Q ss_pred C--cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 105 P--AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 105 ~--~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
. ......+.+..+.+.+|+.++|++++ . +|
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~--nG 190 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT--S--TG 190 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC--T--TS
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE--e--CC
Confidence 1 01111234678889999999999888 4 57
No 241
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.60 E-value=2.8e-07 Score=71.19 Aligned_cols=89 Identities=16% Similarity=0.228 Sum_probs=55.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC---CC-HHH-------------HHHHHhCC---C
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD---RS-ESS-------------YQSYLSGM---P 103 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d---~~-~~~-------------~~~~~~~~---~ 103 (190)
.++++|+.||.+|||+|+++.+.+.++.+. | ++.+..+.+. .. ... +..+...+ +
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 170 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS----G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLK 170 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT----T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC----C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCC
Confidence 578899999999999999999999876553 2 3666555442 11 111 11111111 1
Q ss_pred CCcc-------cCCchhHHHHHHHcCCCCCCeeeeeeecCCCc
Q psy8729 104 WPAI-------PYASETRQSLASLYNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 104 ~~~~-------~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~ 139 (190)
+... ....+.+..+.+.+|+.++|++++ .+.+|+
T Consensus 171 l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi--~~~~G~ 211 (241)
T 1v58_A 171 LNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYY--MSKENT 211 (241)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEE--EETTTE
T ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEE--ECCCCC
Confidence 1000 001122467788999999999999 887883
No 242
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.58 E-value=1.3e-08 Score=80.68 Aligned_cols=59 Identities=15% Similarity=0.481 Sum_probs=41.9
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
+++|||+||++|+...|.++++++++ . .+.+|..+. .+.+++++++|++.++||
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~d~-----------------~~~~~~la~~~gI~~vPT 254 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPNGP-----------------GTPQAQECTEAGITSYPT 254 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSSCS-----------------SSCCCHHHHTTTCCSTTE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeecCc-----------------hhhHHHHHHHcCCcccCe
Confidence 68999999999999999998876543 1 233331100 011468899999999999
Q ss_pred eeeeeecCCC
Q psy8729 129 LILLAVEAGG 138 (190)
Q Consensus 129 ~~l~~id~~g 138 (190)
++ + +|
T Consensus 255 -~~--i--~G 259 (291)
T 3kp9_A 255 -WI--I--NG 259 (291)
T ss_dssp -EE--E--TT
T ss_pred -EE--E--CC
Confidence 44 4 67
No 243
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.51 E-value=1.5e-06 Score=63.33 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=35.9
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.|+..|||+|+.+.+.+.++.++|.+.| ++.++...+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 68889999999999999999999999988884332 466666554
No 244
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.51 E-value=4.6e-07 Score=67.55 Aligned_cols=43 Identities=23% Similarity=0.382 Sum_probs=36.0
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
.++++||.||+.|||+|+.+.|.+.++.++++++ +.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~---v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT---EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC---eEEEEecCC
Confidence 5789999999999999999999999998887653 666666554
No 245
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.51 E-value=2e-07 Score=75.71 Aligned_cols=68 Identities=15% Similarity=0.250 Sum_probs=55.2
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
.+.++|.||++||++|+.+.|.+.+++++++++ +.++.|+++... ...+++.||+.
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~---i~f~~vd~~~~~---------------------~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFIFIDSDHTD---------------------NQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT---CEEEEECTTSGG---------------------GHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc---eEEEEecCChHH---------------------HHHHHHHcCCC
Confidence 456789999999999999999999999999865 667777665322 47889999998
Q ss_pred C--CCeeeeeeecCCC
Q psy8729 125 G--IPSLILLAVEAGG 138 (190)
Q Consensus 125 ~--~P~~~l~~id~~g 138 (190)
+ +|++.+ ++.++
T Consensus 191 ~~~~P~~~~--~~~~~ 204 (361)
T 3uem_A 191 KEECPAVRL--ITLEE 204 (361)
T ss_dssp TTTCSEEEE--EECC-
T ss_pred ccCCccEEE--EEcCC
Confidence 7 999999 77643
No 246
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.49 E-value=2.9e-07 Score=71.12 Aligned_cols=66 Identities=9% Similarity=0.146 Sum_probs=52.7
Q ss_pred CcEEEEEEEcCC--ChhhhhhhHHHHHHHHHHhh-cCC-cEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHH
Q psy8729 45 CQVIGLYFSAHW--CPPCKAFTPQLIETYRKLKE-DGY-QFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASL 120 (190)
Q Consensus 45 ~k~vlv~F~a~w--C~~C~~~~~~l~~l~~~~~~-~g~-~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
.++++|.||++| |++|+.+.+.+.++++.+.. +|. .+.++.++.+. ...+++.
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~-----------------------~~~~~~~ 81 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES-----------------------DSDKFSE 81 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT-----------------------THHHHHH
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc-----------------------CHHHHHh
Confidence 467899999999 99999999999999887521 221 17777777664 4678999
Q ss_pred cCCCCCCeeeeeeec
Q psy8729 121 YNVHGIPSLILLAVE 135 (190)
Q Consensus 121 ~~v~~~P~~~l~~id 135 (190)
|||.++|++.+ ++
T Consensus 82 ~gv~~~Pt~~i--~~ 94 (243)
T 2hls_A 82 FKVERVPTVAF--LG 94 (243)
T ss_dssp TTCCSSSEEEE--TT
T ss_pred cCCCcCCEEEE--EC
Confidence 99999999999 73
No 247
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.48 E-value=6.1e-07 Score=66.36 Aligned_cols=42 Identities=14% Similarity=0.253 Sum_probs=34.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.||.+|||+|....+.+.++.+++.+ ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 467899999999999999999999998888754 366655554
No 248
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.45 E-value=6e-07 Score=56.99 Aligned_cols=54 Identities=17% Similarity=0.325 Sum_probs=37.5
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.||++||++|+...+.|.+. + +.+..++++.+++ .....+.+|+.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~--i~~~~vdi~~~~~--------------------~~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------G--FDFEMINVDRVPE--------------------AAEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEETTTCHH--------------------HHHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------C--CCeEEEECCCCHH--------------------HHHHHHHhCCCccCE
Confidence 5779999999999999988642 2 4455677765442 122233589999998
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 54 ~~~ 56 (81)
T 1h75_A 54 VIA 56 (81)
T ss_dssp EEE
T ss_pred EEE
Confidence 843
No 249
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.27 E-value=5.9e-07 Score=59.97 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=38.9
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+++|||+|+...+.|.++...++ ++..+-|..+.+..+ ....+.+.+|+.++|+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~----~~~~vdi~~~~~~~~------------------~~~~l~~~~g~~~vP~ 71 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG----LLEFVDITATSDTNE------------------IQDYLQQLTGARTVPR 71 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT----SEEEEEGGGSTTHHH------------------HHHHHHHHHSCCCSCE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC----ccEEEEccCCCCHHH------------------HHHHHHHHhCCCCcCe
Confidence 567999999999999999975432221 245544433221110 0245677899999999
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 72 i~~ 74 (105)
T 1kte_A 72 VFI 74 (105)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 250
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.20 E-value=4.7e-06 Score=56.67 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=38.4
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
.++.|+++|||+|+...+.|.++...+ +++. .++++.++. .......+.+.+|+.++|
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~----~~~~--~vdi~~~~~----------------~~~~~~~l~~~~g~~~vP 77 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR----GAYE--IVDIKEFKP----------------ENELRDYFEQITGGKTVP 77 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT----TSEE--EEEGGGSSS----------------HHHHHHHHHHHHSCCSSC
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc----CceE--EEEccCCCC----------------hHHHHHHHHHHhCCCCcC
Confidence 367799999999999999885432110 0144 455443210 000134678889999999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 78 ~v~i 81 (114)
T 2hze_A 78 RIFF 81 (114)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8644
No 251
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.18 E-value=5.3e-07 Score=67.57 Aligned_cols=44 Identities=23% Similarity=0.325 Sum_probs=36.4
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDR 90 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~ 90 (190)
.++++||.||+.|||+|+.+.|.+ .++.++++++ +.+..+.++.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~---v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG---VKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT---CCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC---CEEEEeccCc
Confidence 467899999999999999999998 8888888653 6666666653
No 252
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.18 E-value=4e-06 Score=52.06 Aligned_cols=54 Identities=13% Similarity=0.163 Sum_probs=37.0
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+++||++|+...+.|.++ | +.+..++++.+++ .....+.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~--i~~~~~di~~~~~--------------------~~~~~~~~~~~~vP~ 53 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------G--LAYNTVDISLDDE--------------------ARDYVMALGYVQAPV 53 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEETTTCHH--------------------HHHHHHHTTCBCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------C--CCcEEEECCCCHH--------------------HHHHHHHcCCCccCE
Confidence 5679999999999999988643 2 3445566664432 112224689999998
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 54 l~~ 56 (75)
T 1r7h_A 54 VEV 56 (75)
T ss_dssp EEE
T ss_pred EEE
Confidence 755
No 253
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.13 E-value=1.7e-05 Score=57.78 Aligned_cols=42 Identities=26% Similarity=0.540 Sum_probs=33.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEe
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFV 86 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i 86 (190)
.++++||.|+.-.||+|+++.+.+.++.+++.+.+ .+....+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~-~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGA-KFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTC-EEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCce-EEEEEec
Confidence 57789999999999999999999999999887652 3444333
No 254
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=5.3e-06 Score=57.87 Aligned_cols=57 Identities=16% Similarity=0.291 Sum_probs=37.0
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCee
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSL 129 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~ 129 (190)
+.|+++||++|+...+.|.++. ..+ ..+.+|.+.+. ......+.+.+++..+|++
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~~-------i~~--~~vdid~~~~~----------------~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDMN-------VNY--KVVELDLLEYG----------------NQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHHT-------CCC--EEEETTTSTTH----------------HHHHHHHHHHHSSCCSSEE
T ss_pred EEEEcCCChHHHHHHHHHHHcC-------CCc--EEEECcCCcCc----------------HHHHHHHHHHhCCCCcCEE
Confidence 3499999999999999987541 123 34555533100 0002357888999999988
Q ss_pred ee
Q psy8729 130 IL 131 (190)
Q Consensus 130 ~l 131 (190)
++
T Consensus 85 ~i 86 (130)
T 2cq9_A 85 FV 86 (130)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 255
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.11 E-value=1.2e-05 Score=50.84 Aligned_cols=55 Identities=15% Similarity=0.306 Sum_probs=37.7
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+++||++|+...+.|.+. | +.+..++++.+++ ....+.+.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~--i~~~~~~i~~~~~-------------------~~~~~~~~~~~~~vP~ 54 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------G--VSFQELPIDGNAA-------------------KREEMIKRSGRTTVPQ 54 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------T--CCCEEEECTTCSH-------------------HHHHHHHHHSSCCSCE
T ss_pred EEEEECCCChhHHHHHHHHHHC-------C--CCcEEEECCCCHH-------------------HHHHHHHHhCCCCcCE
Confidence 5678999999999999888652 2 2334455553321 1346677889999999
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 55 l~~ 57 (82)
T 1fov_A 55 IFI 57 (82)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 256
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.11 E-value=5.9e-06 Score=58.90 Aligned_cols=57 Identities=11% Similarity=0.256 Sum_probs=36.9
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCee
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSL 129 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~ 129 (190)
+.|+++|||+|+...+.|.++. ..+..+-|+.+.+..+ ....+.+.+|+.++|++
T Consensus 52 vvf~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~------------------~~~~L~~~~g~~tvP~i 106 (146)
T 2ht9_A 52 VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQ------------------FQDALYKMTGERTVPRI 106 (146)
T ss_dssp EEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHH------------------HHHHHHHHHSCCCSCEE
T ss_pred EEEECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHH------------------HHHHHHHHhCCCCcCeE
Confidence 4499999999999999987541 2344443333211110 02457888999999988
Q ss_pred ee
Q psy8729 130 IL 131 (190)
Q Consensus 130 ~l 131 (190)
++
T Consensus 107 fi 108 (146)
T 2ht9_A 107 FV 108 (146)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 257
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.08 E-value=1.6e-05 Score=54.48 Aligned_cols=61 Identities=11% Similarity=0.293 Sum_probs=37.3
Q ss_pred EEEEEcCCChhhhhh-hHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 49 GLYFSAHWCPPCKAF-TPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~-~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
++.|+++|||+|+.. .+.|.+... . .+.+..++++.+++. ......+.+.+|+.++|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~----~--~i~~~~vdid~~~~~----------------~~~~~~l~~~~g~~tvP 84 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV----P--RSKVLVLQLNDMKEG----------------ADIQAALYEINGQRTVP 84 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC----C--GGGEEEEEGGGSTTH----------------HHHHHHHHHHHSCCSSC
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC----C--CCCeEEEECccCCCh----------------HHHHHHHHHHhCCCCcC
Confidence 556999999999998 777644220 0 123444554432100 00135678889999999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 85 ~vfi 88 (118)
T 3c1r_A 85 NIYI 88 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8755
No 258
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.97 E-value=2e-05 Score=52.28 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=39.0
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHc-CCCC
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLY-NVHG 125 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~ 125 (190)
..++.|+++|||+|++..+.|.++ | +.+..++++.+++. ...+.+.. |...
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~-------~--i~y~~idI~~~~~~-------------------~~~l~~~~~g~~~ 67 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRK-------G--VEFQEYCIDGDNEA-------------------REAMAARANGKRS 67 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHH-------T--CCCEEEECTTCHHH-------------------HHHHHHHTTTCCC
T ss_pred CCEEEEEcCCChhHHHHHHHHHHC-------C--CCCEEEEcCCCHHH-------------------HHHHHHHhCCCCC
Confidence 346679999999999999999653 2 23444566654321 23455556 8999
Q ss_pred CCeeee
Q psy8729 126 IPSLIL 131 (190)
Q Consensus 126 ~P~~~l 131 (190)
+|++++
T Consensus 68 vP~ifi 73 (99)
T 3qmx_A 68 LPQIFI 73 (99)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 998866
No 259
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.97 E-value=1.8e-05 Score=51.10 Aligned_cols=53 Identities=19% Similarity=0.345 Sum_probs=37.5
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHc-CCCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLY-NVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~P 127 (190)
++.|+++||++|+...+.|.+. + +.+..++++ .+ ....+.+.+ ++.++|
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------~--i~~~~vdv~--~~-------------------~~~~l~~~~~~~~~vP 57 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------G--VKYTDIDAS--TS-------------------LRQEMVQRANGRNTFP 57 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------T--CCEEEECSC--HH-------------------HHHHHHHHHHSSCCSC
T ss_pred EEEEECCCChhHHHHHHHHHHc-------C--CCcEEEECC--HH-------------------HHHHHHHHhCCCCCcC
Confidence 6778999999999999888653 1 234445554 21 145677788 999999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 58 ~l~~ 61 (89)
T 2klx_A 58 QIFI 61 (89)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 260
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.95 E-value=3.7e-05 Score=49.75 Aligned_cols=55 Identities=15% Similarity=0.302 Sum_probs=37.8
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+++||++|+...+.|.+. + +.+..++++.+++. ...+.+.+++.++|+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~--i~~~~~di~~~~~~-------------------~~~l~~~~~~~~vP~ 59 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------G--AEFNEIDASATPEL-------------------RAEMQERSGRNTFPQ 59 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEESTTSHHH-------------------HHHHHHHHTSSCCCE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------C--CCcEEEECCCCHHH-------------------HHHHHHHhCCCCcCE
Confidence 6778999999999998888642 2 33445566543321 345677889999996
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 60 l~~ 62 (92)
T 2khp_A 60 IFI 62 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 261
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.95 E-value=4e-05 Score=54.60 Aligned_cols=83 Identities=16% Similarity=0.336 Sum_probs=52.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEee--C---CCCH--------------HHHHHHHhCCCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVS--S---DRSE--------------SSYQSYLSGMPW 104 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~--~---d~~~--------------~~~~~~~~~~~~ 104 (190)
.++++|+.|+.++||+|+++.+.+.++ + ++.++.+. + ..+. +.|..++.....
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~---~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T---DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C---SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C---ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 688999999999999999999998653 1 35555443 2 1111 123222221111
Q ss_pred C----cccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 105 P----AIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 105 ~----~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
. ......+.+..+.+.+||.++|++++ .+|
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi----~nG 118 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF----PNG 118 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC----TTS
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE----ECC
Confidence 1 11122344778899999999999988 467
No 262
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.94 E-value=3.3e-05 Score=52.19 Aligned_cols=58 Identities=17% Similarity=0.380 Sum_probs=36.9
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC-CHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR-SESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
++.|+++|||+|+...+.|.++ |..+..+-|..+. +..++ ...+.+.+|...+|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~------------------~~~l~~~~g~~tvP 75 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQL------------------QKVLERLTGQHTVP 75 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHH------------------HHHHHHHHSCCSSC
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHH------------------HHHHHHHhCCCCcC
Confidence 5669999999999999988643 2234444443321 11111 23455667999999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 76 ~ifi 79 (113)
T 3rhb_A 76 NVFV 79 (113)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9866
No 263
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.93 E-value=4.2e-05 Score=50.87 Aligned_cols=61 Identities=15% Similarity=0.281 Sum_probs=38.2
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
.++.|+++|||+|+...+.|.+. |..+..+-|..+. .++...+ ...+.+.+|..++|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~-~~~~~~~---------------~~~l~~~~g~~~vP 79 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLE-GKEEEEA---------------VEEVRRFNPSVSFP 79 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCC-HHHHHHH---------------HHHHHHHCTTCCSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEeeccC-cccHHHH---------------HHHHHHhCCCCccC
Confidence 35679999999999999999653 2235555444321 1111111 12334557899999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 80 ~l~i 83 (103)
T 3nzn_A 80 TTII 83 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9877
No 264
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.90 E-value=3.4e-05 Score=51.54 Aligned_cols=58 Identities=26% Similarity=0.241 Sum_probs=38.4
Q ss_pred CCcEEEEEEEc-----CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHH
Q psy8729 44 SCQVIGLYFSA-----HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLA 118 (190)
Q Consensus 44 ~~k~vlv~F~a-----~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (190)
.++ ++| |+. +|||+|+...+.|.++ + +.+..++++.+++ ....+.
T Consensus 16 ~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~--i~~~~vdi~~~~~-------------------~~~~l~ 65 (105)
T 2yan_A 16 KAS-VML-FMKGNKQEAKCGFSKQILEILNST-------G--VEYETFDILEDEE-------------------VRQGLK 65 (105)
T ss_dssp SSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH-------T--CCCEEEEGGGCHH-------------------HHHHHH
T ss_pred cCC-EEE-EEecCCCCCCCccHHHHHHHHHHC-------C--CCeEEEECCCCHH-------------------HHHHHH
Confidence 344 444 666 9999999999988653 1 3345556654332 124566
Q ss_pred HHcCCCCCCeeee
Q psy8729 119 SLYNVHGIPSLIL 131 (190)
Q Consensus 119 ~~~~v~~~P~~~l 131 (190)
+.+|..++|++++
T Consensus 66 ~~~g~~~vP~v~i 78 (105)
T 2yan_A 66 AYSNWPTYPQLYV 78 (105)
T ss_dssp HHHTCCSSCEEEE
T ss_pred HHHCCCCCCeEEE
Confidence 7789999999865
No 265
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.86 E-value=3.5e-05 Score=49.29 Aligned_cols=58 Identities=12% Similarity=0.177 Sum_probs=37.5
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC----
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV---- 123 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---- 123 (190)
.++.|+.+|||+|++....|.+. |..+..+.|+.+.+... ..++.+.+|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~-------~i~~~~~~vd~~~~~~~-------------------~~el~~~~g~~~~~ 58 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN-------NIAFDETIIDDYAQRSK-------------------FYDEMNQSGKVIFP 58 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEECCSHHHHHH-------------------HHHHHHTTTCCSSC
T ss_pred EEEEEEcCCChhHHHHHHHHHHc-------CCCceEEEeecCCChhH-------------------HHHHHHHhCCCCCC
Confidence 36778999999999988887542 23355555544322111 2345666676
Q ss_pred -CCCCeeee
Q psy8729 124 -HGIPSLIL 131 (190)
Q Consensus 124 -~~~P~~~l 131 (190)
.++|++++
T Consensus 59 ~~~vP~i~i 67 (89)
T 3msz_A 59 ISTVPQIFI 67 (89)
T ss_dssp CCSSCEEEE
T ss_pred CCccCEEEE
Confidence 89999866
No 266
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.84 E-value=8.5e-05 Score=51.66 Aligned_cols=61 Identities=15% Similarity=0.265 Sum_probs=39.2
Q ss_pred EEEEEcCCChhhhhh-hHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 49 GLYFSAHWCPPCKAF-TPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~-~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
++.|+.+|||+|+.. .+.|.++... ...+..+-|..+.+..+ ....+.+.+|...+|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~------------------~~~~L~~~~g~~tVP 96 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSE------------------IQDALEEISGQKTVP 96 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHH------------------HHHHHHHHHSCCSSC
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHH------------------HHHHHHHHhCCCCCC
Confidence 567899999999998 7777543210 03466655554432110 134677788999999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
++++
T Consensus 97 ~vfi 100 (129)
T 3ctg_A 97 NVYI 100 (129)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9766
No 267
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.82 E-value=3.5e-05 Score=49.89 Aligned_cols=60 Identities=22% Similarity=0.419 Sum_probs=38.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+++|||+|++..+.|.++ |..+..+-|...+..+ -. .....+.+.+++.++|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~~~~~~~-~~---------------~~~~~l~~~~g~~~vP~ 70 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE-------GVDFEVIWIDKLEGEE-RK---------------KVIEKVHSISGSYSVPV 70 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCCHHH-HH---------------HHHHHHHHHHSSSCSCE
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCcEEEEeeeCCccc-hH---------------HHHHHHHHhcCCCCcCE
Confidence 5678999999999999888653 2234454443221111 00 00256778889999998
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 71 l~~ 73 (92)
T 3ic4_A 71 VVK 73 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 268
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.78 E-value=0.00011 Score=49.85 Aligned_cols=58 Identities=14% Similarity=0.351 Sum_probs=37.0
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
++.|+.+|||+|++..+.|.++ |..+..+-|+.+.+..++ ...+.+..|...+|+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~------------------~~~l~~~~g~~tvP~ 73 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARV------------------QEVLSEITNQKTVPN 73 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHH------------------HHHHHHHHSCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHH------------------HHHHHHHhCCCccCE
Confidence 3459999999999999888653 223444444332222211 234556678899999
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 74 vfi 76 (114)
T 3h8q_A 74 IFV 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 877
No 269
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.66 E-value=9.2e-05 Score=48.46 Aligned_cols=58 Identities=16% Similarity=0.345 Sum_probs=38.7
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHH-cCCCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASL-YNVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~P 127 (190)
|+.|+.+|||+|++....|.+ .| +.+-.++++.+++. ...+.+. -|...+|
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~g--i~y~~idi~~d~~~-------------------~~~~~~~~~G~~tVP 57 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NR--IAYDEVDIEHNRAA-------------------AEFVGSVNGGNRTVP 57 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TT--CCCEEEETTTCHHH-------------------HHHHHHHSSSSSCSC
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cC--CceEEEEcCCCHHH-------------------HHHHHHHcCCCCEeC
Confidence 567889999999999888853 23 44455666655432 2233333 3788999
Q ss_pred eeeeeeecCCC
Q psy8729 128 SLILLAVEAGG 138 (190)
Q Consensus 128 ~~~l~~id~~g 138 (190)
++++ .||
T Consensus 58 ~I~i----~Dg 64 (92)
T 2lqo_A 58 TVKF----ADG 64 (92)
T ss_dssp EEEE----TTS
T ss_pred EEEE----eCC
Confidence 9887 467
No 270
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.60 E-value=1.7e-05 Score=58.73 Aligned_cols=42 Identities=19% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~ 88 (190)
..+++||.||+.|||+|+.+.|.+ .++.+++.++ +.++.+.+
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~---v~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQG---SRMVKYHV 57 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTT---CCEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCC---CEEEEEec
Confidence 456889999999999999999986 5777766543 44555544
No 271
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.42 E-value=8.4e-05 Score=54.79 Aligned_cols=30 Identities=13% Similarity=0.013 Sum_probs=28.4
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHH
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKL 74 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~ 74 (190)
++++||.||+.|||+|+.+.|.+.++.+++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 678999999999999999999999999988
No 272
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.38 E-value=0.00036 Score=46.79 Aligned_cols=58 Identities=24% Similarity=0.226 Sum_probs=37.7
Q ss_pred CCcEEEEEEEc-----CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHH
Q psy8729 44 SCQVIGLYFSA-----HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLA 118 (190)
Q Consensus 44 ~~k~vlv~F~a-----~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (190)
.++ ++ .|+. +|||+|+...+.|.+. | +.+..++++.+++. ...+.
T Consensus 14 ~~~-vv-vy~~g~~~~~~Cp~C~~ak~~L~~~-------~--i~~~~vdi~~~~~~-------------------~~~l~ 63 (109)
T 1wik_A 14 KAS-VM-LFMKGNKQEAKCGFSKQILEILNST-------G--VEYETFDILEDEEV-------------------RQGLK 63 (109)
T ss_dssp TSS-EE-EEESSTTTCCCSSTHHHHHHHHHHT-------C--SCEEEEESSSCHHH-------------------HHHHH
T ss_pred cCC-EE-EEEecCCCCCCCchHHHHHHHHHHc-------C--CCeEEEECCCCHHH-------------------HHHHH
Confidence 454 43 4555 9999999999888542 2 33455566644321 34566
Q ss_pred HHcCCCCCCeeee
Q psy8729 119 SLYNVHGIPSLIL 131 (190)
Q Consensus 119 ~~~~v~~~P~~~l 131 (190)
+.+|...+|.+++
T Consensus 64 ~~~g~~~vP~ifi 76 (109)
T 1wik_A 64 TFSNWPTYPQLYV 76 (109)
T ss_dssp HHHSCCSSCEEEC
T ss_pred HHhCCCCCCEEEE
Confidence 6778899998655
No 273
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.00062 Score=47.15 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=39.1
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCe
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPS 128 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 128 (190)
|+.|..+|||+|++....|.+. + ..+..+..+-|+.+.+.++++ ..+.+..|...+|.
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~---~-~~~v~~~~idid~~~d~~~~~------------------~~l~~~~G~~tVP~ 73 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENE---Y-QFIPNYYIIELDKHGHGEELQ------------------EYIKLVTGRGTVPN 73 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH---E-EEESCCEEEEGGGSTTHHHHH------------------HHHHHHHSCCSSCE
T ss_pred EEEEEcCCCccHHHHHHHHHHh---c-ccCCCcEEEEecCCCCHHHHH------------------HHHHHHcCCCCcce
Confidence 5778899999999999888652 1 112335565555544333222 23344568889999
Q ss_pred eee
Q psy8729 129 LIL 131 (190)
Q Consensus 129 ~~l 131 (190)
+++
T Consensus 74 IfI 76 (127)
T 3l4n_A 74 LLV 76 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 274
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.30 E-value=0.001 Score=50.37 Aligned_cols=67 Identities=15% Similarity=0.227 Sum_probs=51.5
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC-
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH- 124 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~- 124 (190)
+..++.|..+||.+|....+.+.+++++++++ +.++.++.+... ...+.+.||+.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~---i~F~~vd~~~~~---------------------~~~~l~~fgl~~ 187 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK---ILFILVDSGMKE---------------------NGKVISFFKLKE 187 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT---CEEEEEETTSGG---------------------GHHHHHHTTCCG
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC---EEEEEeCCccHh---------------------HHHHHHHcCCCc
Confidence 34556677889999999999999999999865 677777765322 34567889998
Q ss_pred -CCCeeeeeeecCCC
Q psy8729 125 -GIPSLILLAVEAGG 138 (190)
Q Consensus 125 -~~P~~~l~~id~~g 138 (190)
.+|++.+ ++..+
T Consensus 188 ~~~P~~~i--~~~~~ 200 (227)
T 4f9z_D 188 SQLPALAI--YQTLD 200 (227)
T ss_dssp GGCSEEEE--EESSS
T ss_pred ccCCEEEE--EECCC
Confidence 7999999 77544
No 275
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=0.00087 Score=49.17 Aligned_cols=92 Identities=8% Similarity=0.141 Sum_probs=56.8
Q ss_pred CCCccceeeee----ccCCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeCCCCHH--HHHHHHhC
Q psy8729 31 EGTVTTKVLSY----IESCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSSDRSES--SYQSYLSG 101 (190)
Q Consensus 31 ~~~~~~~~~~~----~~~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~d~~~~--~~~~~~~~ 101 (190)
.+++...+... ..++|+++|+++++||+.|..+...+ .++.+-+++ ++.+++.+++.++. ....++.+
T Consensus 37 ~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~---nfV~w~~dv~~~e~~~~~~~~~~~ 113 (178)
T 2ec4_A 37 IGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ---NFITWAWDLTKDSNRARFLTMCNR 113 (178)
T ss_dssp CSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH---TEEEEEEECCSHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc---CEEEEEEeCCCchhhhhhhhhhhh
Confidence 34454454444 45899999999999999999887533 334444443 37777777664331 11112111
Q ss_pred -CCCCcccCCchhHHHH---HHHcCCCCCCeeeeeeecCCC
Q psy8729 102 -MPWPAIPYASETRQSL---ASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 102 -~~~~~~~~~~~~~~~~---~~~~~v~~~P~~~l~~id~~g 138 (190)
.+ ..+ .+.|++.++|++.+ |++.+
T Consensus 114 ~~g-----------~~~a~~~~~~~~~~~P~l~i--i~~~~ 141 (178)
T 2ec4_A 114 HFG-----------SVVAQTIRTQKTDQFPLFLI--IMGKR 141 (178)
T ss_dssp HTC-----------HHHHHHHHHSCSTTCSEEEE--ECCCS
T ss_pred hhH-----------HHHHHHHhhcCCCCCCeEEE--EEcCC
Confidence 11 123 34489999999999 98764
No 276
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.10 E-value=0.00026 Score=52.44 Aligned_cols=44 Identities=25% Similarity=0.361 Sum_probs=33.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH---HHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL---IETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++||.|+..|||+|+++.|.+ .++.+++.++ ..+..+-+..
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~~ 66 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVEF 66 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECSS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEeccc
Confidence 457899999999999999999987 6888888754 3444444443
No 277
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=97.01 E-value=0.0022 Score=40.85 Aligned_cols=57 Identities=16% Similarity=0.249 Sum_probs=35.9
Q ss_pred EEEEEcC----CChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC---CCHHHHHHHHhCCCCCcccCCchhHHHHHHHc
Q psy8729 49 GLYFSAH----WCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD---RSESSYQSYLSGMPWPAIPYASETRQSLASLY 121 (190)
Q Consensus 49 lv~F~a~----wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (190)
++.|+.+ |||+|++....|++ .|..+..+-|... .+++ ....+.+..
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~~~~~~~~~~-------------------~~~~l~~~~ 55 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIMPEKGVFDDE-------------------KIAELLTKL 55 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESCSBTTBCCHH-------------------HHHHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEeeccccccCHH-------------------HHHHHHHHh
Confidence 4567889 99999998888854 2333444444310 2221 134566777
Q ss_pred CCC-----CCCeeee
Q psy8729 122 NVH-----GIPSLIL 131 (190)
Q Consensus 122 ~v~-----~~P~~~l 131 (190)
|.. .+|.+++
T Consensus 56 g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 56 GRDTQIGLTMPQVFA 70 (87)
T ss_dssp TCSCCTTCCSCEEEC
T ss_pred CCCCCCCCccCEEEE
Confidence 887 8998766
No 278
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=96.99 E-value=0.004 Score=48.64 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=31.6
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++.+++.|+.+.||+|+++.+.+.++.+. ..+.++.+.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~-----~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE-----NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH-----CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC-----CcEEEEEeec
Confidence 577899999999999999999999866553 2466666554
No 279
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.76 E-value=0.0034 Score=42.22 Aligned_cols=54 Identities=22% Similarity=0.245 Sum_probs=34.5
Q ss_pred EEEEc-----CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 50 LYFSA-----HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 50 v~F~a-----~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
|.|.. +|||+|++....|.+. |..+. .++++.+++ + ...+.+..|..
T Consensus 19 vlf~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~--~~di~~d~~-~------------------~~~l~~~~g~~ 70 (111)
T 3zyw_A 19 MLFMKGTPQEPRCGFSKQMVEILHKH-------NIQFS--SFDIFSDEE-V------------------RQGLKAYSSWP 70 (111)
T ss_dssp EEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCE--EEEGGGCHH-H------------------HHHHHHHHTCC
T ss_pred EEEEecCCCCCcchhHHHHHHHHHHc-------CCCeE--EEECcCCHH-H------------------HHHHHHHHCCC
Confidence 45667 9999999999888542 22333 445443332 1 23445555888
Q ss_pred CCCeeee
Q psy8729 125 GIPSLIL 131 (190)
Q Consensus 125 ~~P~~~l 131 (190)
.+|.+++
T Consensus 71 tvP~ifi 77 (111)
T 3zyw_A 71 TYPQLYV 77 (111)
T ss_dssp SSCEEEE
T ss_pred CCCEEEE
Confidence 9999877
No 280
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.73 E-value=0.0035 Score=43.80 Aligned_cols=59 Identities=20% Similarity=0.228 Sum_probs=37.0
Q ss_pred CCcEEEEEEEc----CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHH
Q psy8729 44 SCQVIGLYFSA----HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLAS 119 (190)
Q Consensus 44 ~~k~vlv~F~a----~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
.++ ++|+.++ +|||+|++....|.++ | +.+..++++.+++ ....+.+
T Consensus 34 ~~~-Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------g--v~y~~vdI~~d~~-------------------~~~~L~~ 84 (135)
T 2wci_A 34 ENP-ILLYMKGSPKLPSCGFSAQAVQALAAC-------G--ERFAYVDILQNPD-------------------IRAELPK 84 (135)
T ss_dssp HCS-EEEEESBCSSSBSSHHHHHHHHHHHTT-------C--SCCEEEEGGGCHH-------------------HHHHHHH
T ss_pred cCC-EEEEEEecCCCCCCccHHHHHHHHHHc-------C--CceEEEECCCCHH-------------------HHHHHHH
Confidence 444 4454444 8999999998888542 3 2344455553332 1345566
Q ss_pred HcCCCCCCeeee
Q psy8729 120 LYNVHGIPSLIL 131 (190)
Q Consensus 120 ~~~v~~~P~~~l 131 (190)
..|...+|.+++
T Consensus 85 ~~G~~tvP~VfI 96 (135)
T 2wci_A 85 YANWPTFPQLWV 96 (135)
T ss_dssp HHTCCSSCEEEE
T ss_pred HHCCCCcCEEEE
Confidence 678889998876
No 281
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=96.69 E-value=0.0022 Score=46.88 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=32.8
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH-HHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL-IETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l-~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.+++++|.||..+||+|....+.+ .++.+++... +.+..+.+
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~---v~~~~~~l 58 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI---VAFTPFHL 58 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT---CEEEEEEC
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc---eEEEEEec
Confidence 356688899999999999999999 9888887643 45554443
No 282
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.62 E-value=0.0051 Score=39.70 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=34.3
Q ss_pred EEEEEcCCChhh------hhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 49 GLYFSAHWCPPC------KAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 49 lv~F~a~wC~~C------~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
++.|+.+|||.| ++....|. +.| +.+..++++.+++. ...+.+.+|
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~-------~~~--i~~~~~di~~~~~~-------------------~~~l~~~~g 55 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD-------GKR--IQYQLVDISQDNAL-------------------RDEMRTLAG 55 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH-------HTT--CCCEEEETTSCHHH-------------------HHHHHHHTT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH-------HCC--CceEEEECCCCHHH-------------------HHHHHHHhC
Confidence 566789999999 56555553 223 33445555544321 245566677
Q ss_pred --CCCCCeeee
Q psy8729 123 --VHGIPSLIL 131 (190)
Q Consensus 123 --v~~~P~~~l 131 (190)
...+|.+++
T Consensus 56 ~~~~~vP~ifi 66 (93)
T 1t1v_A 56 NPKATPPQIVN 66 (93)
T ss_dssp CTTCCSCEEEE
T ss_pred CCCCCCCEEEE
Confidence 678998877
No 283
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.45 E-value=0.0079 Score=40.32 Aligned_cols=35 Identities=20% Similarity=-0.054 Sum_probs=21.9
Q ss_pred EEEEEcCCChhhh------hhhHHHHHHHHHHhhcCCcEEEEEeeCCCCH
Q psy8729 49 GLYFSAHWCPPCK------AFTPQLIETYRKLKEDGYQFEIIFVSSDRSE 92 (190)
Q Consensus 49 lv~F~a~wC~~C~------~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~ 92 (190)
|+.|+.+||+.|+ +....|. . .| +.+..++++.++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~----~---~g--i~y~~vdI~~~~ 50 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLE----A---NK--IEFEEVDITMSE 50 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH----H---TT--CCEEEEETTTCH
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHH----H---cC--CCEEEEECCCCH
Confidence 5678899999999 4554443 2 23 345556666543
No 284
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.44 E-value=0.0058 Score=45.43 Aligned_cols=44 Identities=23% Similarity=0.513 Sum_probs=34.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH-HHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL-IETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l-~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.|+...||+|+++.+.+ ..+.++|.+.| ++.++...+
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g-~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKG-DVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTT-SEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCC-eEEEEEEec
Confidence 688999999999999999999887 55666775442 566766654
No 285
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.36 E-value=0.009 Score=39.87 Aligned_cols=49 Identities=24% Similarity=0.231 Sum_probs=31.3
Q ss_pred CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeee
Q psy8729 55 HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 55 ~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l 131 (190)
+|||+|++....|.+. |..+. .++++.+++. ...+.+..|...+|.+++
T Consensus 31 p~Cp~C~~ak~~L~~~-------gi~~~--~~dI~~~~~~-------------------~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-------NVPFE--DVNILENEML-------------------RQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp BSSHHHHHHHHHHHHT-------TCCCE--EEEGGGCHHH-------------------HHHHHHHHTCSSSCEEEE
T ss_pred CCChhHHHHHHHHHHc-------CCCcE--EEECCCCHHH-------------------HHHHHHHHCCCCCCeEEE
Confidence 4999999999888642 22333 4444433321 345555668889998877
No 286
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.018 Score=39.20 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=31.8
Q ss_pred CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeee
Q psy8729 55 HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 55 ~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l 131 (190)
||||+|++....|.+..-.+. .+. .++++.+.+. ...+.+..|...+|.+++
T Consensus 29 p~Cp~C~~ak~lL~~~gv~~~----~~~--~~dv~~~~~~-------------------~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQGVDPA----KFA--AYNVLEDPEL-------------------REGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp BCTTHHHHHHHHHHHHTBCGG----GEE--EEECTTCHHH-------------------HHHHHHHHTCCSSCEEEE
T ss_pred CCCccHHHHHHHHHHcCCCcc----eEE--EEEecCCHHH-------------------HHHHHHHhCCCCCCeEEE
Confidence 499999999998865311100 133 3444433321 345555668889999887
No 287
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.18 E-value=0.019 Score=43.46 Aligned_cols=56 Identities=18% Similarity=0.294 Sum_probs=38.0
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCC
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGI 126 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 126 (190)
..++.|+.+|||+|++....|.+. |..+.. ++++.+.+ ...+.+.+|...+
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~--~~i~~~~~--------------------~~~l~~~~g~~~v 220 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK-------GLSFEE--IILGHDAT--------------------IVSVRAVSGRTTV 220 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH-------TCCCEE--EETTTTCC--------------------HHHHHHHTCCSSS
T ss_pred ceEEEEECCCChHHHHHHHHHHHc-------CCceEE--EECCCchH--------------------HHHHHHHhCCCCc
Confidence 346778899999999998888642 223444 44442211 2567778899999
Q ss_pred Ceeee
Q psy8729 127 PSLIL 131 (190)
Q Consensus 127 P~~~l 131 (190)
|.+++
T Consensus 221 P~~~~ 225 (241)
T 1nm3_A 221 PQVFI 225 (241)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98766
No 288
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.12 E-value=0.012 Score=44.59 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=34.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH-HHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL-IETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l-~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++++|+.|+...||+|+++.+.+ .++.++|.+.| ++.++...+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g-~V~~v~~~~ 82 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTG-KMLYIFRHF 82 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTT-SEEEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCC-eEEEEEEeC
Confidence 688899999999999999999864 77888885442 466665544
No 289
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.09 E-value=0.016 Score=39.33 Aligned_cols=50 Identities=20% Similarity=0.185 Sum_probs=30.9
Q ss_pred CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeee
Q psy8729 55 HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 55 ~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l 131 (190)
+|||+|++....|.+. |.. .+-.++++.+++ + ...+.+..|...+|.+++
T Consensus 33 p~Cp~C~~ak~lL~~~-------gv~-~~~~vdV~~d~~-~------------------~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH-------GVR-DYAAYNVLDDPE-L------------------RQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp BSSHHHHHHHHHHHHT-------TCC-CCEEEESSSCHH-H------------------HHHHHHHHTCCSSCEEEE
T ss_pred CccHHHHHHHHHHHHc-------CCC-CCEEEEcCCCHH-H------------------HHHHHHHhCCCCcCeEEE
Confidence 4999999998888642 221 133445554332 1 234455558889999877
No 290
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=96.07 E-value=0.018 Score=42.78 Aligned_cols=82 Identities=20% Similarity=0.314 Sum_probs=59.3
Q ss_pred eccCCcEEEEEEE-cCCChhhhh-hhHHHHHHHHHH-hhcCCcEEEEEeeCCCCHHHHHHHHhCCCC---CcccCCchhH
Q psy8729 41 YIESCQVIGLYFS-AHWCPPCKA-FTPQLIETYRKL-KEDGYQFEIIFVSSDRSESSYQSYLSGMPW---PAIPYASETR 114 (190)
Q Consensus 41 ~~~~~k~vlv~F~-a~wC~~C~~-~~~~l~~l~~~~-~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~---~~~~~~~~~~ 114 (190)
.+.++|.+||.+. +.+.|.|.. .+|.+.+.+.++ +.+|.+ +|+.++++ +...++.|.+.++. ..+++..|.+
T Consensus 65 ~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd-~I~ciSVN-D~FVm~AW~k~~~~~~~~~i~~laD~~ 142 (199)
T 4h86_A 65 LISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVD-QVIVVTVD-NPFANQAWAKSLGVKDTTHIKFASDPG 142 (199)
T ss_dssp HHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCC-EEEEEESS-CHHHHHHHHHHTTCCCCSSEEEEECGG
T ss_pred HhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCc-EEEEEEcC-CHHHHHHHHHHhcccccccccccCCcc
Confidence 3335776655554 778899976 688887777664 556522 57788887 57778888876653 3578889999
Q ss_pred HHHHHHcCCC
Q psy8729 115 QSLASLYNVH 124 (190)
Q Consensus 115 ~~~~~~~~v~ 124 (190)
.++.+.+|+.
T Consensus 143 ~eftkalGl~ 152 (199)
T 4h86_A 143 CAFTKSIGFE 152 (199)
T ss_dssp GHHHHHTTCE
T ss_pred hHHHHhcCce
Confidence 9999999974
No 291
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.73 E-value=0.018 Score=42.09 Aligned_cols=42 Identities=10% Similarity=0.001 Sum_probs=33.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHH-hhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKL-KEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~-~~~g~~~~ii~i~~ 88 (190)
.++++|+.|....||+|++..+.+..+.+++ .+ ++.++.-..
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g---~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED---NVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT---TEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---CEEEEEEEc
Confidence 6788999999999999999999998877776 33 466665543
No 292
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.70 E-value=0.014 Score=42.36 Aligned_cols=42 Identities=17% Similarity=0.376 Sum_probs=31.3
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHH-HHHHHHHhhcCCcEEEEEe
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQL-IETYRKLKEDGYQFEIIFV 86 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l-~~l~~~~~~~g~~~~ii~i 86 (190)
.++++|+.|+...||+|....+.+ ..+.++|.+.| ++.++..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~-~v~~~~~ 52 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNH-KVEYQFV 52 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT-SSEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCC-eEEEEEE
Confidence 567789999999999999999998 56777776532 3444443
No 293
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=95.67 E-value=0.044 Score=42.69 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=43.0
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCC----chhHHHHHHHc
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYA----SETRQSLASLY 121 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 121 (190)
++.|..|+.++||+|......|.++...+. +..+.+.++.-+ ..+|.- |+. .+.+..+.+.+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-----vi~l~~~v~~~d--------ylgw~D-~~a~~~~~~r~~~~~~~~ 108 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKGD-----VVGLSYHVDYWN--------YLGWTD-SLASKENTERQYGYMRAL 108 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHTS-----SEEEEEECSTTC--------SSSSCC-TTCCHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccCC-----eeeEEEEEEEec--------cccccc-chhhhhhhHHHHHHHHHh
Confidence 356778999999999999999988766531 322334432100 011100 111 11134577788
Q ss_pred CCCCC--Ceeee
Q psy8729 122 NVHGI--PSLIL 131 (190)
Q Consensus 122 ~v~~~--P~~~l 131 (190)
|...+ |.+++
T Consensus 109 G~~tVyTPqI~I 120 (270)
T 2axo_A 109 GRNGVYTPQAIL 120 (270)
T ss_dssp TCSCCCSSEEEE
T ss_pred CCCcccCCEEEE
Confidence 99887 99777
No 294
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=95.57 E-value=0.032 Score=41.57 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=34.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHH-HHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYR-KLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~-~~~~~g~~~~ii~i~~ 88 (190)
.++++||.|....||+|+++.+.+....+ +|-+. .++.++.-.+
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~-g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQP-GKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccC-CeEEEEEEeC
Confidence 68899999999999999999988865545 77444 3577776654
No 295
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=95.03 E-value=0.065 Score=36.60 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=42.8
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
...+++||-||.+||.+| .+.+.++++.+ ++ +.+... . +..+.+.|+
T Consensus 37 ~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d---~~F~~t-~-------------------------~~~v~~~~~ 83 (124)
T 2l4c_A 37 AATEVAVIGFFQDLEIPA---VPILHSMVQKF-PG---VSFGIS-T-------------------------DSEVLTHYN 83 (124)
T ss_dssp HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TT---SEEEEE-C-------------------------CHHHHHHTT
T ss_pred hcCCCEEEEEECCCCChh---HHHHHHHHHhC-CC---ceEEEE-C-------------------------hHHHHHHcC
Confidence 367889999999999998 56677777777 43 444322 2 256888999
Q ss_pred CCCCCeeeeeeecC
Q psy8729 123 VHGIPSLILLAVEA 136 (190)
Q Consensus 123 v~~~P~~~l~~id~ 136 (190)
+. .|++++ +.+
T Consensus 84 v~-~~~vvl--fkk 94 (124)
T 2l4c_A 84 IT-GNTICL--FRL 94 (124)
T ss_dssp CC-SSCEEE--EET
T ss_pred CC-CCeEEE--EEc
Confidence 98 799999 655
No 296
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=94.81 E-value=0.045 Score=41.42 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=26.7
Q ss_pred ccCCchhHHHHHHHcCCCCCCeeeeeeecCCCceEEE
Q psy8729 107 IPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 107 ~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g~~~i~ 143 (190)
+....+.+..+.++|||.++|++++ ++++|+....
T Consensus 187 v~~~~~~~~~l~~~f~v~~~Pslvl--~~~~g~~~~~ 221 (244)
T 3q6o_A 187 VRRVLNTEANVVRKFGVTDFPSCYL--LFRNGSVSRV 221 (244)
T ss_dssp EEEEETTCHHHHHHHTCCCSSEEEE--EETTSCEEEC
T ss_pred EEEEeCchHHHHHHcCCCCCCeEEE--EeCCCCeEee
Confidence 3333344579999999999999999 9999955433
No 297
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=94.73 E-value=0.08 Score=42.35 Aligned_cols=65 Identities=15% Similarity=0.223 Sum_probs=48.6
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHH----HHc
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLA----SLY 121 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 121 (190)
+..++.|...||+.|....+.+.++++++++. .++.++.++.+.. ..++ +.|
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-~~~~f~~id~~~~-----------------------~~~~~~~~~~~ 301 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDN-PDLSIVWIDPDDF-----------------------PLLVAYWEKTF 301 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-SSCCEEEECGGGC-----------------------HHHHHHHHHHC
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-CceEEEEECchhh-----------------------HHHHHHHHhhc
Confidence 44456688999999999999999999999851 2466777665421 2344 789
Q ss_pred CCC-CCCeeeeeeecC
Q psy8729 122 NVH-GIPSLILLAVEA 136 (190)
Q Consensus 122 ~v~-~~P~~~l~~id~ 136 (190)
|+. .+|++.+ ++.
T Consensus 302 gi~~~~P~~~i--~~~ 315 (350)
T 1sji_A 302 KIDLFKPQIGV--VNV 315 (350)
T ss_dssp CSCTTSCEEEE--EES
T ss_pred CCCccCCcEEE--Eec
Confidence 987 5899999 876
No 298
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=94.69 E-value=0.1 Score=35.53 Aligned_cols=13 Identities=8% Similarity=-0.192 Sum_probs=10.5
Q ss_pred EEEEEcCCChhhh
Q psy8729 49 GLYFSAHWCPPCK 61 (190)
Q Consensus 49 lv~F~a~wC~~C~ 61 (190)
|+.|.+++|+.|.
T Consensus 2 V~vYtt~~c~~c~ 14 (121)
T 1u6t_A 2 IRVYIASSSGSTA 14 (121)
T ss_dssp EEEEECTTCSCHH
T ss_pred EEEEecCCCCCcc
Confidence 5667799999994
No 299
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=93.74 E-value=0.082 Score=42.85 Aligned_cols=61 Identities=10% Similarity=0.161 Sum_probs=34.3
Q ss_pred EEEEEcCCChhhhhhhH-HHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTP-QLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~-~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
|+.|..+|||+|++... .|++..-.| ..+.++-+....+..++ ...+.+..|...+|
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y----~eidVlEld~~~~~~e~------------------~~~L~~~tG~~TVP 320 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPR----SKVLVLQLNDMKEGADI------------------QAALYEINGQRTVP 320 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCT----TTEEEEEGGGSTTHHHH------------------HHHHHHHHCCCSSC
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCc----ceEEEEEeccccCCHHH------------------HHHHHHHHCCCCcC
Confidence 45678999999998765 454321111 12344333211111111 24556667899999
Q ss_pred eeee
Q psy8729 128 SLIL 131 (190)
Q Consensus 128 ~~~l 131 (190)
.+++
T Consensus 321 qVFI 324 (362)
T 2jad_A 321 NIYI 324 (362)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8877
No 300
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=91.90 E-value=0.47 Score=32.47 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=32.2
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGM 102 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~ 102 (190)
+..|+.++|+.|+.....|.+ .|..++++-|.-+ .+.++++.++...
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~ 50 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMT 50 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTC
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHc
Confidence 456789999999998888854 2334555544433 3457788888744
No 301
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=91.71 E-value=0.51 Score=31.89 Aligned_cols=66 Identities=18% Similarity=0.199 Sum_probs=37.2
Q ss_pred eeeeeccCCcEEEEEEEc-----CCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCc
Q psy8729 37 KVLSYIESCQVIGLYFSA-----HWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYAS 111 (190)
Q Consensus 37 ~~~~~~~~~k~vlv~F~a-----~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~ 111 (190)
.+.+.+.++++ |.|.- |.||+|++....|... |.. .+..+.++.+.+ .
T Consensus 12 ~i~~~i~~~~V--vvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~-~~~~~~v~~~~~-~---------------- 64 (118)
T 2wul_A 12 QLDALVKKDKV--VVFLKGTPEQPQCGFSNAVVQILRLH-------GVR-DYAAYNVLDDPE-L---------------- 64 (118)
T ss_dssp HHHHHHHHSSE--EEEESBCSSSBSSHHHHHHHHHHHHT-------TCC-SCEEEETTSCHH-H----------------
T ss_pred HHHHHHhcCCE--EEEEcCCCCCCCCHHHHHHHHHHHHh-------CCc-CeEeecccCCHH-H----------------
Confidence 33344445554 34443 5799999988877432 210 133445554432 1
Q ss_pred hhHHHHHHHcCCCCCCeeee
Q psy8729 112 ETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 112 ~~~~~~~~~~~v~~~P~~~l 131 (190)
...+.+.-|-..+|.+|+
T Consensus 65 --r~~l~~~sg~~TvPqIFI 82 (118)
T 2wul_A 65 --RQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp --HHHHHHHHTCCSSCEEEE
T ss_pred --HHHHHHhccCCCCCeEeE
Confidence 344555557788999988
No 302
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=91.70 E-value=0.18 Score=33.66 Aligned_cols=48 Identities=8% Similarity=0.058 Sum_probs=32.6
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMP 103 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~ 103 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++++.|
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhCC
Confidence 456789999999998888854 2444556555433 35577777776555
No 303
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=91.44 E-value=0.48 Score=31.90 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=32.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGM 102 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~ 102 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++...
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIMTSPLSRDELLKILSYT 49 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecccCCCcHHHHHHHHhhc
Confidence 456789999999999888853 2334555555433 4567888888743
No 304
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=91.39 E-value=0.11 Score=39.46 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=60.5
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNV 123 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 123 (190)
..++++|-|+.+|| ....+.+.++++.++++ +.+..+ .+ ..+++.|++
T Consensus 23 ~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~---~~F~~~-~~-------------------------~~v~~~~~~ 70 (252)
T 2h8l_A 23 DKDASIVGFFDDSF---SEAHSEFLKAASNLRDN---YRFAHT-NV-------------------------ESLVNEYDD 70 (252)
T ss_dssp SSSCEEEEEESCTT---SHHHHHHHHHHHHTTTT---SCEEEE-CC-------------------------HHHHHHHCS
T ss_pred cCCeEEEEEECCCC---ChHHHHHHHHHHhcccC---cEEEEE-Ch-------------------------HHHHHHhCC
Confidence 56678888999884 46677888888888665 334333 22 467889999
Q ss_pred CCCCeeeeeeecC--------CCceEEEc-cccc-cccccCCCCCcCCCCcccccccCCCCCCCCCCCCeEEEEE
Q psy8729 124 HGIPSLILLAVEA--------GGRLDVIT-TEAR-HELSEDPDGEFFPWPPKLVNVLSPRHCPKLYDSPALILFI 188 (190)
Q Consensus 124 ~~~P~~~l~~id~--------~g~~~i~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~ 188 (190)
.. |++++ +.+ ++ .+.+ .+.. .+.+.++... ..-+.+..++......+...|..++|.
T Consensus 71 ~~-p~i~~--fk~~~~~~kf~e~--~~~y~~g~~~~~~l~~fi~~---~~~Plv~e~t~~n~~~~~~~~~~v~~~ 137 (252)
T 2h8l_A 71 NG-EGIIL--FRPSHLTNKFEDK--TVAYTEQKMTSGKIKKFIQE---NIFGICPHMTEDNKDLIQGKDLLIAYY 137 (252)
T ss_dssp SS-EEEEE--ECCGGGCCTTSCS--EEECCCSSCCHHHHHHHHHH---HSSCSSCEECTTTHHHHSSSSEEEEEE
T ss_pred CC-CcEEE--Ecchhhccccccc--ccccCCCCcCHHHHHHHHHh---cccCCeeecccccHhhhcCCCeEEEEe
Confidence 97 99888 542 24 3443 2221 1112222111 011345556665555555667776665
No 305
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=91.36 E-value=0.43 Score=38.42 Aligned_cols=71 Identities=13% Similarity=0.170 Sum_probs=51.2
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC-
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH- 124 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~- 124 (190)
+..++.|+..+|+.|....+.+.+++++++++ .++.++.++.+.... ....+.+.||+.
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~-~ki~F~~id~~~~~~-------------------~l~~~~~~fgl~~ 307 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDN-PDLSIIWIDPDDFPL-------------------LVPYWEKTFDIDL 307 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTC-TTCCEEEECGGGCTT-------------------THHHHHHHHTCCT
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCC-CceEEEEECCccchh-------------------HHHHHHHhcCCCC
Confidence 45667788999999999999999999999874 147777776653210 012235678887
Q ss_pred CCCeeeeeeecCCC
Q psy8729 125 GIPSLILLAVEAGG 138 (190)
Q Consensus 125 ~~P~~~l~~id~~g 138 (190)
.+|.+.+ ++...
T Consensus 308 ~~P~~~i--~~~~~ 319 (367)
T 3us3_A 308 SAPQIGV--VNVTD 319 (367)
T ss_dssp TSCEEEE--EETTT
T ss_pred CCCeEEE--Eeccc
Confidence 8999999 87643
No 306
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=91.31 E-value=0.96 Score=34.20 Aligned_cols=67 Identities=12% Similarity=0.146 Sum_probs=45.1
Q ss_pred EEEEEEEcCCChh----hhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 47 VIGLYFSAHWCPP----CKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 47 ~vlv~F~a~wC~~----C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
+++|.|+...+.. .......+.++++++++++..+.++.++.+. ...+.+.||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~-----------------------~~~~~~~fg 187 (252)
T 2h8l_A 131 DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT-----------------------FSHELSDFG 187 (252)
T ss_dssp SEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT-----------------------THHHHGGGT
T ss_pred CeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHH-----------------------HHHHHHHcC
Confidence 3455555443321 1246778888999998755568888887653 234678899
Q ss_pred C----CCCCeeeeeeecCCC
Q psy8729 123 V----HGIPSLILLAVEAGG 138 (190)
Q Consensus 123 v----~~~P~~~l~~id~~g 138 (190)
+ ..+|.+.+ ++.++
T Consensus 188 l~~~~~~~P~v~i--~~~~~ 205 (252)
T 2h8l_A 188 LESTAGEIPVVAI--RTAKG 205 (252)
T ss_dssp CCCCSCSSCEEEE--ECTTS
T ss_pred CCCccCCCCEEEE--EeCcC
Confidence 9 35899999 87655
No 307
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.28 E-value=0.22 Score=33.55 Aligned_cols=49 Identities=14% Similarity=0.314 Sum_probs=34.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMPW 104 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~~ 104 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++++.++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 556789999999999888854 2334666555433 356788888887774
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.05 E-value=0.47 Score=40.67 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=26.6
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHH
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~ 97 (190)
++.|..+|||+|+.....|.+. +..+..+-|..+.+..+++.
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~ 61 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQK 61 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHH
Confidence 5678899999999988888642 22345555544433333333
No 309
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=90.80 E-value=0.41 Score=35.71 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=42.4
Q ss_pred cCCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 43 ~~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
..++++||-|+++|| ....+.+.++++.+. + +.+.. .. +..+++.|+
T Consensus 25 ~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~---~~F~~-t~-------------------------~~~v~~~~~ 71 (227)
T 4f9z_D 25 AATEVAVIGFFQDLE---IPAVPILHSMVQKFP-G---VSFGI-ST-------------------------DSEVLTHYN 71 (227)
T ss_dssp HTSSEEEEEECSCSC---STHHHHHHHHTTTCT-T---SEEEE-EC-------------------------CHHHHHHTT
T ss_pred hcCCeEEEEEecCCC---chhHHHHHHHHHhCC-C---ceEEE-EC-------------------------CHHHHHHcC
Confidence 367899999999985 678888888888773 2 34432 22 257788999
Q ss_pred CCCCCeeeeeeecC
Q psy8729 123 VHGIPSLILLAVEA 136 (190)
Q Consensus 123 v~~~P~~~l~~id~ 136 (190)
+.+ |++++ +.+
T Consensus 72 v~~-p~i~l--fk~ 82 (227)
T 4f9z_D 72 ITG-NTICL--FRL 82 (227)
T ss_dssp CCS-SEEEE--EET
T ss_pred CCC-CeEEE--EEe
Confidence 998 99998 544
No 310
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=90.30 E-value=0.95 Score=30.48 Aligned_cols=49 Identities=12% Similarity=0.341 Sum_probs=34.4
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMP 103 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~ 103 (190)
.+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++...+
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g 53 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAASLIRNWLENSG 53 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHHHHHHHHHHSC
T ss_pred eEEEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHHHHHHHHHHcC
Confidence 3556789999999999988853 2334555555444 46788888888665
No 311
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=90.04 E-value=1.5 Score=37.14 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=23.5
Q ss_pred HHHHHHHcCCCCCCeeeeeeecCCCceEEE
Q psy8729 114 RQSLASLYNVHGIPSLILLAVEAGGRLDVI 143 (190)
Q Consensus 114 ~~~~~~~~~v~~~P~~~l~~id~~g~~~i~ 143 (190)
+..+.++|||..+|++++ ++++|+...+
T Consensus 194 ~~~l~~kfgV~~~Pslvl--~~~nGk~~~~ 221 (519)
T 3t58_A 194 ESDLVNKFGVTDFPSCYL--LLRNGSVSRV 221 (519)
T ss_dssp CHHHHHHHTCCCSSEEEE--EETTSCEEEC
T ss_pred hHHHHHHcCCCCCCeEEE--EeCCCceeec
Confidence 368899999999999999 9999965433
No 312
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=89.41 E-value=0.38 Score=32.53 Aligned_cols=49 Identities=8% Similarity=0.181 Sum_probs=34.0
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMPW 104 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~~ 104 (190)
+..|+.++|+.|++....|.+ .|..++.+-+.-+ .+.++++.++...++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLETPPSVDKLKELLQQLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTSCCCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccCCCcHHHHHHHHHhcCC
Confidence 456779999999999888842 3334554444333 367888888888876
No 313
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=88.34 E-value=0.81 Score=30.83 Aligned_cols=48 Identities=15% Similarity=0.337 Sum_probs=33.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMP 103 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~ 103 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++...+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g 54 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIVDDNPTVEELKAWIPLSG 54 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTTCCCHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecccCcCCHHHHHHHHHHcC
Confidence 456789999999999888853 2334555555444 45778888887555
No 314
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=85.92 E-value=0.62 Score=32.41 Aligned_cols=49 Identities=10% Similarity=0.063 Sum_probs=32.3
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMPW 104 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~~ 104 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.++...++
T Consensus 4 itiY~~p~C~~crkak~~L~~-------~gi~~~~idi~~~~~~~~eL~~~~~~~g~ 53 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN-------SGTEPTIILYLENPPSRDELVKLIADMGI 53 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECTTTSCCCHHHHHHHHHHHTS
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCEEEEECCCCCccHHHHHHHhcccCC
Confidence 346779999999998888853 3334445444333 356778888776654
No 315
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=85.23 E-value=2.1 Score=34.44 Aligned_cols=65 Identities=8% Similarity=0.038 Sum_probs=43.8
Q ss_pred CCcEEEEEEEcCCCh-hhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 44 SCQVIGLYFSAHWCP-PCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~-~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
.+++++|.|+.++|. .|..+...+.+.+.++++ .+.++.++.+. ...+.+.||
T Consensus 235 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~---~i~f~~id~~~-----------------------~~~~~~~~g 288 (382)
T 2r2j_A 235 EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG---TINFLHADCDK-----------------------FRHPLLHIQ 288 (382)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT---TSEEEEEETTT-----------------------THHHHHHTT
T ss_pred CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC---eeEEEEEchHH-----------------------hHHHHHHcC
Confidence 577888999999885 455555566655555543 47777777653 245677888
Q ss_pred CC--CCCeeeeeeecC
Q psy8729 123 VH--GIPSLILLAVEA 136 (190)
Q Consensus 123 v~--~~P~~~l~~id~ 136 (190)
+. .+|.+.+ ++.
T Consensus 289 l~~~~~P~i~i--~~~ 302 (382)
T 2r2j_A 289 KTPADCPVIAI--DSF 302 (382)
T ss_dssp CCGGGCSEEEE--ECS
T ss_pred CCccCCCEEEE--Ecc
Confidence 86 6898887 654
No 316
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=84.28 E-value=3.4 Score=28.56 Aligned_cols=67 Identities=10% Similarity=0.178 Sum_probs=42.7
Q ss_pred CCcEEEEEEEcC-CChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcC
Q psy8729 44 SCQVIGLYFSAH-WCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYN 122 (190)
Q Consensus 44 ~~k~vlv~F~a~-wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (190)
++.++.+.++.. .-..-....+.+.+++++++++ +.++.++.+.+. .......||
T Consensus 30 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk---i~Fv~vd~~~~~---------------------~~~~l~~fG 85 (147)
T 3bj5_A 30 GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFAFIDSDHTD---------------------NQRILEFFG 85 (147)
T ss_dssp SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT---CEEEEECTTCGG---------------------GHHHHHHTT
T ss_pred CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc---eEEEEEecchHh---------------------HHHHHHHcC
Confidence 344444444443 2233455778889999998765 556666543222 345778899
Q ss_pred CCC--CCeeeeeeecC
Q psy8729 123 VHG--IPSLILLAVEA 136 (190)
Q Consensus 123 v~~--~P~~~l~~id~ 136 (190)
+.. +|.+.+ ++.
T Consensus 86 l~~~~~P~v~i--~~~ 99 (147)
T 3bj5_A 86 LKKEECPAVRL--ITL 99 (147)
T ss_dssp CCGGGCSEEEE--EEC
T ss_pred CCcccCCEEEE--Eec
Confidence 985 899999 764
No 317
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=83.25 E-value=0.53 Score=31.70 Aligned_cols=50 Identities=10% Similarity=0.099 Sum_probs=34.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC-CCHHHHHHHHhCCCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD-RSESSYQSYLSGMPWP 105 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d-~~~~~~~~~~~~~~~~ 105 (190)
+..|+.++|+.|++....|.+ .|..++++-+.-+ .+.++++.+++..++.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~eL~~~l~~~g~~ 56 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVEELKRLYQQLGLN 56 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHHHHHHHHHHHTCS
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHHHHHHHHHHcCCc
Confidence 456679999999999988853 2334555444333 4678888888877764
No 318
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=83.01 E-value=2.3 Score=30.96 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=26.8
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEE
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIF 85 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~ 85 (190)
+.|..|+...||+|....+.+.++.+ +.+.+..+.+..
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 45778889999999988888888877 443223344433
No 319
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=80.87 E-value=2.4 Score=30.90 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=30.3
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEee
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVS 87 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~ 87 (190)
..|.+|+..-||.|-...+.|.++.+.+... ..+......
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~-v~v~~~p~~ 42 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGV-IQFEYVVGG 42 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTT-SEEEEEECC
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCC-ceEEEEecc
Confidence 3577888999999999999999999988542 344444443
No 320
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=73.98 E-value=6.9 Score=29.35 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=41.2
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
.++++|-|+.++| ....+.+.++++.++++ +.+... . +..+.+.|++.
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~---~~F~~t-~-------------------------~~~v~~~~~v~ 72 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED---YKFHHT-F-------------------------STEIAKFLKVS 72 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT---CCEEEE-C-------------------------CHHHHHHHTCC
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC---cEEEEE-C-------------------------cHHHHHHcCCC
Confidence 6788899999875 57778888888888765 444332 2 24677789998
Q ss_pred CCCeeeeeeecC
Q psy8729 125 GIPSLILLAVEA 136 (190)
Q Consensus 125 ~~P~~~l~~id~ 136 (190)
. |++++ +.+
T Consensus 73 ~-p~ivl--fk~ 81 (250)
T 3ec3_A 73 L-GKLVL--MQP 81 (250)
T ss_dssp S-SEEEE--ECC
T ss_pred C-CeEEE--Eec
Confidence 7 99998 643
No 321
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=73.35 E-value=6.7 Score=26.29 Aligned_cols=36 Identities=17% Similarity=0.458 Sum_probs=27.5
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
|.+++.|.-|.|+-|...-..|.++..+ ..++-|++
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~lede-------Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSE-------YDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTT-------EEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcc-------ccEEEEEe
Confidence 4689999999999999988888554443 55666664
No 322
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=66.52 E-value=24 Score=23.04 Aligned_cols=73 Identities=11% Similarity=0.197 Sum_probs=53.8
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIP 127 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P 127 (190)
+...|.+...+.+.+.+..+.++-+.+... ..+.+=.|++-. .+.+++.+.+.++|
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~-~~y~LeVIDv~e-----------------------qPeLAE~~~IvATP 68 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEAT-VPISLQVINVAD-----------------------QPQLVEYYRLVVTP 68 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCS-SCEEEEEEETTT-----------------------CHHHHHHTTCCSSS
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccC-CceEEEEeeccc-----------------------CHHHHhHcCeeecc
Confidence 444666777899999999999987776633 245555566554 46889999999999
Q ss_pred eeeeeeecCCCceEEEccc
Q psy8729 128 SLILLAVEAGGRLDVITTE 146 (190)
Q Consensus 128 ~~~l~~id~~g~~~i~~~~ 146 (190)
|++- +.+.-+.++++.+
T Consensus 69 TLIK--~~P~P~rriiGd~ 85 (105)
T 1t4y_A 69 ALVK--IGPGSRQVLSGID 85 (105)
T ss_dssp EEEE--EESSSCEEEESSC
T ss_pred Hhhc--cCCCCceEEeChH
Confidence 9998 8887655565544
No 323
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=63.79 E-value=14 Score=27.59 Aligned_cols=66 Identities=5% Similarity=0.170 Sum_probs=40.0
Q ss_pred CCcEEEEEEEc-CCC---hh-hhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHH
Q psy8729 44 SCQVIGLYFSA-HWC---PP-CKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLA 118 (190)
Q Consensus 44 ~~k~vlv~F~a-~wC---~~-C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (190)
.++++++.|+. ..+ +. +......+.+++++++ + +.++.++.+. .....
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k---i~F~~~d~~~-----------------------~~~~l 183 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E---YTFAIADEED-----------------------YATEV 183 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T---SEEEEEETTT-----------------------THHHH
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c---eeEEEEcHHH-----------------------HHHHH
Confidence 35666666664 333 33 3446778888888876 4 5666665432 23446
Q ss_pred HHcCCCC--C-CeeeeeeecCCC
Q psy8729 119 SLYNVHG--I-PSLILLAVEAGG 138 (190)
Q Consensus 119 ~~~~v~~--~-P~~~l~~id~~g 138 (190)
+.||+.. . |.+++ ++.++
T Consensus 184 ~~fgl~~~~~~p~~~~--~~~~~ 204 (250)
T 3ec3_A 184 KDLGLSESGGDVNAAI--LDESG 204 (250)
T ss_dssp HHTTCSSCSCSCEEEE--ECTTS
T ss_pred HHcCCCccCCCcEEEE--EcCCC
Confidence 6888863 3 57777 77655
No 324
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=59.44 E-value=11 Score=27.10 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=24.2
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHh
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLK 75 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~ 75 (190)
.|.+|+..-||.|....+.|.++.+.+.
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 3567789999999999999999988874
No 325
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=57.89 E-value=9.3 Score=27.23 Aligned_cols=41 Identities=7% Similarity=0.327 Sum_probs=26.7
Q ss_pred CHHHHHHHHhCCCC-CcccCCc----------hhHHHHHHHcCCCCCCeeee
Q psy8729 91 SESSYQSYLSGMPW-PAIPYAS----------ETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 91 ~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~v~~~P~~~l 131 (190)
+.+.+..++.+.|. ..-.+.. ..+....+.+||.++|++++
T Consensus 107 ~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv 158 (185)
T 3feu_A 107 QQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV 158 (185)
T ss_dssp HHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE
Confidence 34667777777775 3222221 11345677899999999988
No 326
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=54.13 E-value=13 Score=26.71 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=25.5
Q ss_pred CHHHHHHHHhCCCCCcccC----C-------chhHHHHHHHcCCCCCCeeee
Q psy8729 91 SESSYQSYLSGMPWPAIPY----A-------SETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~v~~~P~~~l 131 (190)
+.+.+..++.+.|...-.+ . ...+....+.+||.++|++++
T Consensus 106 ~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gtPtfvv 157 (191)
T 3l9s_A 106 SAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADLQLQGVPAMFV 157 (191)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHhCCcccCEEEE
Confidence 5566777777666421111 0 111345677899999999988
No 327
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=53.89 E-value=17 Score=26.57 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=21.3
Q ss_pred EcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 53 SAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 53 ~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
..+|||+|.+..-.|+. + |..++.+.|+..
T Consensus 18 ~~~~SP~~~kvr~~L~~-----k--gi~y~~~~v~~~ 47 (253)
T 4f03_A 18 HSPWSPNTWKIRYALNY-----K--GLKYKTEWVEYP 47 (253)
T ss_dssp TCCCCHHHHHHHHHHHH-----H--TCCEEEEECCGG
T ss_pred CCCcChhHHHHHHHHHH-----c--CCCCEEEEEccc
Confidence 36899999999887742 2 345777777654
No 328
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=53.59 E-value=13 Score=26.46 Aligned_cols=41 Identities=17% Similarity=0.189 Sum_probs=25.2
Q ss_pred CHHHHHHHHhCC-CCCccc----CC-------chhHHHHHHHcCCCCCCeeee
Q psy8729 91 SESSYQSYLSGM-PWPAIP----YA-------SETRQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 91 ~~~~~~~~~~~~-~~~~~~----~~-------~~~~~~~~~~~~v~~~P~~~l 131 (190)
+.+.+..++.+. |...-. +. ...+....+.+|+.++|++++
T Consensus 99 ~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~GtPt~~v 151 (189)
T 3l9v_A 99 SPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLFKEYGVRGTPSVYV 151 (189)
T ss_dssp SHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred CHHHHHHHHHHccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCccCEEEE
Confidence 456677777766 642110 11 111345677899999999998
No 329
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=51.07 E-value=28 Score=26.07 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=22.5
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
..++.+.||+|++..=.|.. .|..++.+.|+..
T Consensus 8 ~LY~~~~sP~~~rv~i~L~e-------~gi~ye~~~vd~~ 40 (265)
T 4g10_A 8 TIYHIPGCPFSERVEIMLEL-------KGLRMKDVEIDIS 40 (265)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------HTCCCEEEECCTT
T ss_pred EEEecCCChHHHHHHHHHHH-------hCCCCEEEEeCCC
Confidence 34678899999987766643 2345677777654
No 330
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=50.80 E-value=11 Score=27.97 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=18.9
Q ss_pred HHHHHH-cCCCCCCeeeeeeecCCCc
Q psy8729 115 QSLASL-YNVHGIPSLILLAVEAGGR 139 (190)
Q Consensus 115 ~~~~~~-~~v~~~P~~~l~~id~~g~ 139 (190)
....+. +||.++|++++ .+.+|+
T Consensus 160 ~~~a~~~~GV~GtPtfvv--~~~nG~ 183 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFI--KLNDDK 183 (226)
T ss_dssp HHHHHHHHCCCSSCEEEE--EECCTT
T ss_pred HHHHHHHcCCCcCCEEEE--EcCCCE
Confidence 455667 99999999999 888883
No 331
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=48.74 E-value=13 Score=26.53 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.3
Q ss_pred HHHHHHcCCCCCCeeee
Q psy8729 115 QSLASLYNVHGIPSLIL 131 (190)
Q Consensus 115 ~~~~~~~~v~~~P~~~l 131 (190)
....+.+||.++|++++
T Consensus 144 ~~~a~~~GV~gtPtf~i 160 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI 160 (182)
T ss_dssp HHHHHHHTCCSSSEEEE
T ss_pred HHHHHHCCCCccCEEEE
Confidence 35677889999999998
No 332
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=47.54 E-value=1.5 Score=20.91 Aligned_cols=11 Identities=36% Similarity=1.084 Sum_probs=9.3
Q ss_pred CChhhhhhhHH
Q psy8729 56 WCPPCKAFTPQ 66 (190)
Q Consensus 56 wC~~C~~~~~~ 66 (190)
.||.|++.+|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999999885
No 333
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=46.48 E-value=20 Score=26.01 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=22.9
Q ss_pred EEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 51 YFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 51 ~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
.|+++.||+|++..-.|.. .|..++++.|+..
T Consensus 25 Ly~~~~SP~~~rVr~~L~e-------~gi~~e~~~v~~~ 56 (225)
T 4glt_A 25 LLYSNTSPYARKVRVVAAE-------KRIDVDMVLVVLA 56 (225)
T ss_dssp EEECSSCHHHHHHHHHHHH-------HTCCCEEEECCTT
T ss_pred EecCCCCHHHHHHHHHHHH-------hCCCCEEEEeCCC
Confidence 4678999999998877743 2345777777654
No 334
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=42.20 E-value=19 Score=25.94 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCCeeee
Q psy8729 114 RQSLASLYNVHGIPSLIL 131 (190)
Q Consensus 114 ~~~~~~~~~v~~~P~~~l 131 (190)
+....+.+||.++|++++
T Consensus 152 ~~~~a~~~gV~gtPtfvv 169 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV 169 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHcCCCcCCEEEE
Confidence 446677899999999988
No 335
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=41.35 E-value=28 Score=24.98 Aligned_cols=21 Identities=38% Similarity=0.458 Sum_probs=16.0
Q ss_pred HHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 115 QSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 115 ~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
......+||.++|++++ - .+|
T Consensus 159 ~~~a~~~gv~g~Pt~~v--~-~~~ 179 (208)
T 3kzq_A 159 LSLAKSLGVNSYPSLVL--Q-IND 179 (208)
T ss_dssp HHHHHHTTCCSSSEEEE--E-ETT
T ss_pred HHHHHHcCCCcccEEEE--E-ECC
Confidence 45567889999999988 4 455
No 336
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=40.10 E-value=17 Score=26.68 Aligned_cols=28 Identities=11% Similarity=-0.186 Sum_probs=23.0
Q ss_pred EEEEEEEcCCChhhhhhhHHHHHHHHHH
Q psy8729 47 VIGLYFSAHWCPPCKAFTPQLIETYRKL 74 (190)
Q Consensus 47 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~ 74 (190)
..|.+|+..-||.|-...+.|.++.+.+
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~ 33 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW 33 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc
Confidence 4577788999999999999998876544
No 337
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=39.34 E-value=6.1 Score=19.36 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=16.2
Q ss_pred CChhhhhhhHHHHHHHHHHh
Q psy8729 56 WCPPCKAFTPQLIETYRKLK 75 (190)
Q Consensus 56 wC~~C~~~~~~l~~l~~~~~ 75 (190)
-|+-|+..+|..+.+..-|.
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 49999999999888766654
No 338
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=37.23 E-value=91 Score=21.90 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=21.5
Q ss_pred EEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 51 YFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 51 ~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
.++++.||+|++..=.|.. .|..++++.|+..
T Consensus 6 LY~~~~sP~~~rvr~~L~e-------~gi~~e~~~v~~~ 37 (210)
T 4hoj_A 6 LYSGITCPFSHRCRFVLYE-------KGMDFEIKDIDIY 37 (210)
T ss_dssp EEECTTCHHHHHHHHHHHH-------HTCCCEEEECCTT
T ss_pred EecCCCChHHHHHHHHHHH-------cCCCCEEEEeCCC
Confidence 4568899999987766643 2345677766654
No 339
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=35.90 E-value=17 Score=23.77 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=44.7
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVH 124 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 124 (190)
.++.+..|-+-..|.+.+.+..+.++-+.+.+. .+.+=.|.+-. .+++++.+++.
T Consensus 6 ~~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~--~y~LeVIDv~~-----------------------~PelAe~~~Iv 60 (105)
T 1wwj_A 6 KTYVLKLYVAGNTPNSVRALKMLKNILEQEFQG--VYALKVIDVLK-----------------------NPQLAEEDKIL 60 (105)
T ss_dssp EEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTT--SEEEEEEETTT-----------------------CCSCCTTCEEE
T ss_pred CceEEEEEEeCCCchHHHHHHHHHHHHHHhcCC--CeEEEEEEccc-----------------------CHhHHhHCCeE
Confidence 345566666768899999999999987776633 45555555543 24556778888
Q ss_pred CCCeeeeeeecC
Q psy8729 125 GIPSLILLAVEA 136 (190)
Q Consensus 125 ~~P~~~l~~id~ 136 (190)
++||++- +.+
T Consensus 61 AtPTLiK--~~P 70 (105)
T 1wwj_A 61 ATPTLAK--ILP 70 (105)
T ss_dssp CHHHHGG--GSC
T ss_pred Eechhhh--cCC
Confidence 8888876 544
No 340
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=35.78 E-value=34 Score=24.40 Aligned_cols=22 Identities=18% Similarity=0.475 Sum_probs=17.3
Q ss_pred HHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 114 RQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 114 ~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
+....+.+|+.++|++++ . .+|
T Consensus 165 ~~~~a~~~gv~g~Pt~~i--~-~~G 186 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVV--E-SGT 186 (216)
T ss_dssp HHHHHHHTTCCSSSEEEE--E-ETT
T ss_pred HHHHHHHcCCcccceEEE--E-ECC
Confidence 455677899999999988 6 367
No 341
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=34.64 E-value=35 Score=24.58 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=23.0
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR 90 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~ 90 (190)
+.++.+.||.|++..-.|... |..++.+.|+...
T Consensus 5 iLY~~~~Sp~~~~vr~~L~~~-------gi~ye~~~v~~~~ 38 (228)
T 4hi7_A 5 ILYGIDASPPVRAVKLTLAAL-------QLPYDYKIVNLMN 38 (228)
T ss_dssp EEEECTTCHHHHHHHHHHHHH-------TCCCEEEECCTTT
T ss_pred EEEECCCChHHHHHHHHHHHh-------CCCCEEEEecCCC
Confidence 356788999999887666432 3456777776653
No 342
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=33.68 E-value=96 Score=21.88 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=23.3
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR 90 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~ 90 (190)
..++.++||.|.+..-.|.. .|..++.+.|+...
T Consensus 5 ~Ly~~~~sp~~~~v~~~l~~-------~gi~~~~~~v~~~~ 38 (218)
T 3ir4_A 5 KLYIYDHCPFCVKARMIFGL-------KNIPVELNVLQNDD 38 (218)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------HTCCCEEEECCTTC
T ss_pred EEEcCCCCchHHHHHHHHHH-------cCCceEEEECCCcc
Confidence 35678899999988777643 13456777776654
No 343
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=32.66 E-value=1.2e+02 Score=21.65 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=23.9
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.++|+.|.+..-.|... |..++++.++..
T Consensus 24 ~~Ly~~~~sp~~~~v~~~L~~~-------gi~ye~~~v~~~ 57 (241)
T 3vln_A 24 IRIYSMRFSPFAERTRLVLKAK-------GIRHEVININLK 57 (241)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH-------TCCEEEEEBCTT
T ss_pred EEEEcCCCCcHHHHHHHHHHHc-------CCCCeEEecCcc
Confidence 3456778999999888777432 345777777654
No 344
>4g6v_A Adhesin/hemolysin; tRNAse, toxin, immunity; 2.64A {Burkholderia pseudomallei 1026A}
Probab=32.05 E-value=1.4e+02 Score=21.27 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=46.1
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCCCHHHHHHHHhCCCCCcccCCchhHHHHH---HH
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLA---SL 120 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 120 (190)
+|+ +++.|++.-. .....+..+.++.+.. +..-+.+++++..-. -+.+. ..
T Consensus 97 NG~--vfD~YsP~~~---nv~nIw~~Vs~Kvk~~--Qa~riVLNL~Dt~~s-------------------~~~i~~ql~~ 150 (176)
T 4g6v_A 97 NGQ--VFDNYAPATG---NVRNIATTISNKVSSG--QASNIVVNLADSSAS-------------------PAAIEAQINS 150 (176)
T ss_dssp TTE--EEEEECCCCC---CHHHHHHHHHHHHHTT--CCCEEEEECTTCCCC-------------------HHHHHHHHHH
T ss_pred CCE--EEeeeccccC---CcchHHHHHHhhhhhc--CcceEEEcccccccC-------------------HHHHHHHhcc
Confidence 554 4588988775 5666677777777632 244555666543211 23333 34
Q ss_pred cCCCCCCeeeeeeecCCCceEEEc
Q psy8729 121 YNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 121 ~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
+-|.++=..++ |+++|.+..+.
T Consensus 151 ~PI~GL~ev~I--I~K~g~i~~i~ 172 (176)
T 4g6v_A 151 YPIPGLGKVIV--IDKLGNITIIK 172 (176)
T ss_dssp SCCTTCCCEEE--ECTTCCEEEEC
T ss_pred CCCCCcceeEE--EecCCcEEEec
Confidence 47888888999 99999665544
No 345
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=31.82 E-value=89 Score=23.03 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=29.1
Q ss_pred cEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 46 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
+..|-+|+..-||.|---.+.|.++.+.+..+ .++.|....+
T Consensus 2 ~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~-~~v~v~~~P~ 43 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVGKARFEKALAAFPHR-DGVEVVHRSF 43 (239)
T ss_dssp CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTG-GGEEEEEEEC
T ss_pred CeEEEEEEeCcCHhHHHHHHHHHHHHHhcCcc-CceEEEEEEe
Confidence 44555566788999999999999988777532 2355555443
No 346
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=31.66 E-value=10 Score=19.48 Aligned_cols=19 Identities=21% Similarity=0.527 Sum_probs=13.4
Q ss_pred ChhhhhhhHHHHHHHHHHh
Q psy8729 57 CPPCKAFTPQLIETYRKLK 75 (190)
Q Consensus 57 C~~C~~~~~~l~~l~~~~~ 75 (190)
||.|+........|..-|.
T Consensus 8 CP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp CTTTCCEESSHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHH
Confidence 9999888776666655544
No 347
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=31.57 E-value=1.1e+02 Score=19.94 Aligned_cols=25 Identities=8% Similarity=0.349 Sum_probs=18.8
Q ss_pred HHHHHHcCCCCCCeeeeeeecCCCceEEEccc
Q psy8729 115 QSLASLYNVHGIPSLILLAVEAGGRLDVITTE 146 (190)
Q Consensus 115 ~~~~~~~~v~~~P~~~l~~id~~g~~~i~~~~ 146 (190)
.++.+.+|+.++|.+++ || +++..+
T Consensus 65 ~~~L~~~G~~~LP~~~V-----DG--evv~~G 89 (106)
T 3ktb_A 65 NDFLQKHGADALPITLV-----DG--EIAVSQ 89 (106)
T ss_dssp HHHHHTTCGGGCSEEEE-----TT--EEEECS
T ss_pred HHHHHHcCcccCCEEEE-----CC--EEEEec
Confidence 56677899999998888 68 555433
No 348
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=29.54 E-value=68 Score=23.22 Aligned_cols=46 Identities=4% Similarity=0.006 Sum_probs=31.5
Q ss_pred CHHHHHHHHhCCCCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 91 SESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
.++..-.|++..+....--+....-..++++|+..+|++|+ +|..+
T Consensus 71 ~d~~ai~fL~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~Fl--iDs~a 116 (188)
T 1vkf_A 71 EGEEAILFVKKAGADGIITIKPKNYVVAKKNGIPAVLRFFA--LDSKA 116 (188)
T ss_dssp SSHHHHHHHHHHTCSEEEESCHHHHHHHHHTTCCEEEEEEC--CSHHH
T ss_pred CCHHHHHHHHhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEE--EEeHH
Confidence 45667777754444344444444567788999999999999 98643
No 349
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=28.97 E-value=1.2e+02 Score=19.80 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=18.4
Q ss_pred HHHHHHHcCCCCCCeeeeeeecCCCceEEEc
Q psy8729 114 RQSLASLYNVHGIPSLILLAVEAGGRLDVIT 144 (190)
Q Consensus 114 ~~~~~~~~~v~~~P~~~l~~id~~g~~~i~~ 144 (190)
-.++.+.+|+.++|.+++ || +++.
T Consensus 61 V~~~L~~~G~~~LP~~~V-----DG--evv~ 84 (110)
T 3kgk_A 61 VKAFIEASGAEGLPLLLL-----DG--ETVM 84 (110)
T ss_dssp HHHHHHHHCGGGCCEEEE-----TT--EEEE
T ss_pred HHHHHHHcCcccCCEEEE-----CC--EEEE
Confidence 357778899999998888 68 4444
No 350
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=28.58 E-value=1.2e+02 Score=21.43 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=23.9
Q ss_pred EEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 48 IGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 48 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
.+..++.++||.|.+..-.|.. . |..++++.++..
T Consensus 6 ~~~Ly~~~~sp~~~~v~~~L~~-----~--gi~~e~~~v~~~ 40 (216)
T 3lyk_A 6 VMTLFSNKDDIYCHQVKIVLAE-----K--GVLYENAEVDLQ 40 (216)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH-----H--TCCCEEEECCTT
T ss_pred eEEEEeCCCChhHHHHHHHHHH-----c--CCCcEEEeCCcc
Confidence 4566778899999998766643 1 345677766654
No 351
>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A
Probab=26.90 E-value=1.1e+02 Score=22.42 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=22.1
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.+.||.|.+..-.|.. .|..++.+.++..
T Consensus 20 ~~Ly~~~~~p~~~~v~~~l~~-------~gi~~e~~~v~~~ 53 (260)
T 1k0d_A 20 YTLFSHRSAPNGFKVAIVLSE-------LGFHYNTIFLDFN 53 (260)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred EEEEcCCCCccHHHHHHHHHH-------CCCCceEEEecCc
Confidence 345567889999876665532 2445777777654
No 352
>4aq4_A SN-glycerol-3-phosphate-binding periplasmic prote; diester-binding protein; HET: G3P; 1.80A {Escherichia coli}
Probab=26.66 E-value=1.8e+02 Score=22.54 Aligned_cols=42 Identities=7% Similarity=0.040 Sum_probs=27.1
Q ss_pred CcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 45 CQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 45 ~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+.++=|.||..|-..-. ..++++.++|.+.+++++|..+...
T Consensus 3 ~~~TTItfW~~~~g~~~---~~~~~~i~~F~~~~p~i~V~~~~~~ 44 (419)
T 4aq4_A 3 HMVTTIPFWHSMEGELG---KEVDSLAQRFNAENPDYKIVPTYKG 44 (419)
T ss_dssp CSCEEEEEEECCCTHHH---HHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CCCEEEEEcCCCCchHH---HHHHHHHHHHHHHCcCeEEEEEeCC
Confidence 34566889988876543 3456666677665567887766554
No 353
>4g68_A ABC transporter; transport protein; HET: XYS; 1.80A {Caldanaerobius} PDB: 4g68_B*
Probab=25.53 E-value=1.3e+02 Score=24.19 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=23.2
Q ss_pred CCcEEEEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 44 SCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 44 ~~k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
.++.|-|.||..|-.. .....++++.++|.+..++++|-....
T Consensus 59 ~~~~vtit~w~~~~~~--~~~~~~~~~i~~F~~~~p~I~V~~~~~ 101 (456)
T 4g68_A 59 SSKKITLTFWNLFTGE--PAKTKVKEIIDQWNKENPNVQIVESVT 101 (456)
T ss_dssp ----CEEEEEECCCST--THHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCCEEEEEeeCCCCc--hHHHHHHHHHHHHHHHCcCeEEEEEEC
Confidence 3455668899877643 223456666677766545555544433
No 354
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=25.21 E-value=1.1e+02 Score=21.41 Aligned_cols=34 Identities=15% Similarity=0.004 Sum_probs=23.0
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.+.|+.|.+..-.|.. .|..++.+.++..
T Consensus 4 ~~Ly~~~~s~~~~~v~~~L~~-------~gi~~e~~~v~~~ 37 (210)
T 3m3m_A 4 YKVYGDYRSGNCYKIKLMLNL-------LGLPYEWQAVDIL 37 (210)
T ss_dssp EEEEECTTSHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred EEEeCCCCCCcHHHHHHHHHH-------cCCCCEEEEecCC
Confidence 345677899999887766632 2446777777653
No 355
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=24.87 E-value=65 Score=23.41 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=23.4
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR 90 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~ 90 (190)
+..++.+.|+.|.+..-.|.. .|..++++.|+...
T Consensus 27 ~~Ly~~~~sp~~~rv~~~L~~-------~gi~ye~~~v~~~~ 61 (243)
T 3qav_A 27 PFVYWGSGSPPCWKVLLVLQE-------KKIDYDEKIISFSK 61 (243)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEECCTTT
T ss_pred cEEEeCCCCcchHHHHHHHHH-------cCCCceEEEecCcc
Confidence 345678899999987766643 23456777776543
No 356
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=24.50 E-value=1.8e+02 Score=20.80 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=23.8
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.++|+.|.+..-.|.. .|..++.+.++..
T Consensus 24 ~~Ly~~~~sp~~~~v~~~L~~-------~gi~~e~~~v~~~ 57 (239)
T 3q18_A 24 IRIYSMRFCPYSHRTRLVLKA-------KDIRHEVVNINLR 57 (239)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEEBCSS
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEecCcc
Confidence 345667899999988877743 2446777777664
No 357
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=23.58 E-value=1.5e+02 Score=20.84 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=22.0
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
..++.+.||.|....-.|.. .|..++.+.++..
T Consensus 4 ~Ly~~~~sp~~~~v~~~L~~-------~gi~~~~~~v~~~ 36 (218)
T 1r5a_A 4 VLYYLPASPPCRSVLLLAKM-------IGVELDLKVLNIM 36 (218)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred EEEeCCCChhHHHHHHHHHH-------cCCCCeEEecCcc
Confidence 45677899999877666632 2445777777654
No 358
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=23.28 E-value=70 Score=22.59 Aligned_cols=33 Identities=12% Similarity=0.307 Sum_probs=22.5
Q ss_pred EEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCCC
Q psy8729 51 YFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR 90 (190)
Q Consensus 51 ~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d~ 90 (190)
.++.++|+.|.+..-.|... |..++++.++...
T Consensus 3 Ly~~~~s~~~~~v~~~L~~~-------gi~ye~~~v~~~~ 35 (219)
T 3f6d_A 3 FYYLPGSAPCRAVQMTAAAV-------GVELNLKLTNLMA 35 (219)
T ss_dssp EEECTTCHHHHHHHHHHHHH-------TCCCEEEECCTTT
T ss_pred EEeCCCCCchHHHHHHHHHc-------CCCceEEEccCcc
Confidence 46788999999877776432 3456777776543
No 359
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*
Probab=22.69 E-value=99 Score=21.86 Aligned_cols=33 Identities=21% Similarity=0.428 Sum_probs=21.8
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
..++.++|+.|.+..-.|.. . |..++.+.++..
T Consensus 5 ~Ly~~~~s~~~~~v~~~L~~-----~--gi~~e~~~v~~~ 37 (221)
T 2imi_A 5 VLYTLHLSPPCRAVELTAKA-----L--GLELEQKTINLL 37 (221)
T ss_dssp EEEECTTCHHHHHHHHHHHH-----H--TCCEEEEECCGG
T ss_pred EEeeCCCCccHHHHHHHHHH-----c--CCCceEEEcccc
Confidence 45667899999887666643 1 345677766653
No 360
>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A
Probab=22.44 E-value=76 Score=23.17 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=22.1
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..+..++||+|++..-.|.. .|..++.+.++..
T Consensus 10 ~~ly~~~~sp~~rkv~~~L~e-------~gi~ye~~~v~~~ 43 (247)
T 2c3n_A 10 LELYLDLLSQPCRAVYIFAKK-------NDIPFELRIVDLI 43 (247)
T ss_dssp EEEEECTTSHHHHHHHHHHHH-------TTCCCEEEECCGG
T ss_pred eEEeecCCChhHHHHHHHHHH-------cCCCceEEEeccc
Confidence 455678999999886665532 2345666666653
No 361
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=22.10 E-value=2.2e+02 Score=20.43 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=23.3
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.++|+.|.+..-.|.. .|..++.+.++..
T Consensus 27 ~~Ly~~~~sp~~~~v~~~L~~-------~gi~ye~~~v~~~ 60 (246)
T 3rbt_A 27 LRLYHVDMNPYGHRVLLVLEA-------KRIKYEVYRLDPL 60 (246)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTBCEEEEECCSS
T ss_pred eEEEecCCCccHHHHHHHHHH-------cCCCceEEEeCcc
Confidence 345677889999988777743 2345777777655
No 362
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=21.87 E-value=97 Score=22.01 Aligned_cols=34 Identities=9% Similarity=-0.107 Sum_probs=22.6
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
+..++.+.||.|.+..-.|.. .|..++.+.++..
T Consensus 4 ~~Ly~~~~sp~~~~vr~~L~~-------~gi~~e~~~v~~~ 37 (225)
T 3m8n_A 4 YKLYSMQRSGNSYKVRLALAL-------LDAPYRAVEVDIL 37 (225)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEECCGG
T ss_pred eEEecCCCCCCHHHHHHHHHH-------cCCCeEEEEeCCC
Confidence 345678899999877666632 2345777777653
No 363
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=21.84 E-value=1.4e+02 Score=21.66 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=40.6
Q ss_pred HHHHHHHHhhcCCcEEEEEeeCC---CCHHHHHHHHhCC-CCCcccCCchhHHHHHHHcCCCCCCeeeeeeecCCC
Q psy8729 67 LIETYRKLKEDGYQFEIIFVSSD---RSESSYQSYLSGM-PWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGG 138 (190)
Q Consensus 67 l~~l~~~~~~~g~~~~ii~i~~d---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~P~~~l~~id~~g 138 (190)
+.++.+.+++.| +..++.+..= ..++..-.|+.+. +....--+....-..+++.|+..+|++|+ +|...
T Consensus 43 l~~~v~~lk~~~-K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~gL~tIqR~Fl--iDS~a 115 (192)
T 3kts_A 43 LKALVKYAQAGG-KKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFM--IDSSA 115 (192)
T ss_dssp HHHHHHHHHHTT-CEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCEEEEEEEC--CSHHH
T ss_pred HHHHHHHHHHcC-CeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCCCeEEEEEEE--EEcch
Confidence 333344455543 3444433321 3456777888853 33333333444567788899999999999 98544
No 364
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Probab=20.96 E-value=97 Score=21.52 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=21.7
Q ss_pred EEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeCC
Q psy8729 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSD 89 (190)
Q Consensus 50 v~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~d 89 (190)
..++.+.||.|.+..-.|.. . |..++.+.++..
T Consensus 4 ~Ly~~~~sp~~~~v~~~L~~-----~--gi~~e~~~v~~~ 36 (209)
T 1axd_A 4 KLYGAVMSWNLTRCATALEE-----A--GSDYEIVPINFA 36 (209)
T ss_dssp EEESCTTCTTHHHHHHHHHH-----H--TCCEEEECCCTT
T ss_pred EEEeCCCCchHHHHHHHHHh-----c--CCCCEEEecccc
Confidence 34567889999988777743 1 345666666554
No 365
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=20.30 E-value=81 Score=22.58 Aligned_cols=33 Identities=9% Similarity=-0.202 Sum_probs=21.9
Q ss_pred EEEEEcCCChhhhhhhHHHHHHHHHHhhcCCcEEEEEeeC
Q psy8729 49 GLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSS 88 (190)
Q Consensus 49 lv~F~a~wC~~C~~~~~~l~~l~~~~~~~g~~~~ii~i~~ 88 (190)
+..++.++||.|.+..-.|... |..++.+.++.
T Consensus 24 ~~Ly~~~~sp~~~~vr~~L~~~-------gi~ye~~~v~~ 56 (229)
T 4iel_A 24 LHILGKIPSINVRKVLWLCTEL-------NLPFEQEDWGA 56 (229)
T ss_dssp EEEESCTTCHHHHHHHHHHHHH-------TCCEEEECCC-
T ss_pred EEEecCCCCcchHHHHHHHHHC-------CCCcEEEEecC
Confidence 4556689999999887777432 34566666654
Done!