RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8729
(190 letters)
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 101 bits (251), Expect = 3e-28
Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 5/119 (4%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105
+ + YFSA WCPP +AFTPQLI+ Y+ E FE++ +S D S ++ Y + MPW
Sbjct: 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWL 87
Query: 106 AIPYA-SETRQSLASLYNVHGIPSLILLAVEAGGRLDVITTEARHELSEDPDGEFFPWP 163
A+P+ + + L + ++V IP+L+ + ++G ++ITT+AR + +DP+ + FPWP
Sbjct: 88 ALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSG---NIITTQARTMVVKDPEAKDFPWP 143
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 81.9 bits (201), Expect = 8e-21
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105
+ + LYFSA WCPPC+ FTP L E Y K FE++ +S D +ES + Y MPW
Sbjct: 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWL 87
Query: 106 AIPYA-SETRQSLASLYNVHGIPSLILLAVEAGGRLDVITTEARHELSEDPDGEFFPWP 163
A+P+ T L + V IP+LI + + G +I T+AR + EDPDG FPWP
Sbjct: 88 ALPFDQRSTVSELGKTFGVESIPTLITINADTG---AIIGTQARTRVIEDPDGANFPWP 143
>d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 62.4 bits (150), Expect = 2e-13
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105
+++ YFSA WCPP + FTPQLIE Y K E + + + +
Sbjct: 27 KLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLA 86
Query: 106 AIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVITTEARHELSEDPDGEFFPWPPK 165
SE Q L+ +NV IP+LI + ++G DV+TT AR L +DP+GE FPW
Sbjct: 87 VPFAQSEAVQKLSKHFNVESIPTLIGVDADSG---DVVTTRARATLVKDPEGEQFPWKDA 143
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 44.9 bits (105), Expect = 6e-07
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQF---EIIFVSSDRSESSYQSYLSGM 102
+ + F A WCP C + Q + + K ++ + +Q + +G+
Sbjct: 24 KPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWYAGL 83
Query: 103 PWPAIPYASETRQSLASLYNVHGIPSLILL 132
+P +P ++ ++A N+ PS L+
Sbjct: 84 NYPKLPVVTDNGGTIAQSLNISVYPSWALI 113
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 41.8 bits (97), Expect = 8e-06
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSES-SYQSYLSGMPW 104
+ ++F + C CK PQ+ E K ++ + S+ +
Sbjct: 30 KPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHD 89
Query: 105 PAIPYASETRQSLASLYNVHGIPSLILL 132
P ++ +L + +P+ +
Sbjct: 90 ITQPIFVDSDHALTDAFENEYVPAYYVF 117
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 38.0 bits (87), Expect = 1e-04
Identities = 14/82 (17%), Positives = 24/82 (29%)
Query: 26 NIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIF 85
NI E T + ++ + + CP C+ F L + K Y
Sbjct: 7 NIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEE 66
Query: 86 VSSDRSESSYQSYLSGMPWPAI 107
S +++S P
Sbjct: 67 PSQLNDLQAFRSRYGIPTVPGF 88
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 38.1 bits (88), Expect = 1e-04
Identities = 7/54 (12%), Positives = 14/54 (25%)
Query: 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLS 100
V+ L P + E R+ + +Q I + +
Sbjct: 38 VVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFR 91
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 35.8 bits (82), Expect = 3e-04
Identities = 8/82 (9%), Positives = 17/82 (20%), Gaps = 26/82 (31%)
Query: 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPY 109
F++ CP C + G
Sbjct: 6 EVFTSPTCPYCPMAIEVV--------------------------DEAKKEFGDKIDVEKI 39
Query: 110 ASETRQSLASLYNVHGIPSLIL 131
+ A Y + +P++ +
Sbjct: 40 DIMVDREKAIEYGLMAVPAIAI 61
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 35.7 bits (81), Expect = 0.001
Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPY 109
L WCP C+ L R + II + + L + P +
Sbjct: 59 LVAGEMWCPDCQINLAALDFAQRLQPN--IELAIISKGRAEDDLRQRLALERIAIPLVLV 116
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 33.8 bits (77), Expect = 0.003
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 47 VIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQF 81
VI L P + E R+ + +Q
Sbjct: 32 VILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQV 66
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 31.7 bits (71), Expect = 0.020
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101
S + + WC CKA P+ E+ + F ++ + + G
Sbjct: 22 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSH-NFVMVNLEDEEEPKDEDFSPDG 80
Query: 102 MPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLDVITTEARHELSED 154
P I + + + + N +G PS V A + + EA+ L+ D
Sbjct: 81 GYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGM-KEAQERLTGD 132
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 31.3 bits (70), Expect = 0.022
Identities = 12/62 (19%), Positives = 26/62 (41%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSG 101
++ + + + F A WC CKA P+ E + ++ ++ D + + + G
Sbjct: 17 LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQG 76
Query: 102 MP 103
P
Sbjct: 77 FP 78
>d1o75a3 b.120.1.1 (A:7-206) Tp47 lipoprotein, N-terminal domain
{Treponema pallidum [TaxId: 160]}
Length = 200
Score = 32.1 bits (72), Expect = 0.028
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 18/110 (16%)
Query: 24 TYNIGLAEGT-------VTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKE 76
T+ G + KVLS E+ G + P + +++ L E
Sbjct: 51 THGHGAFRQQFQYAVEVLGEKVLSKQETEDSRGRKKWEYETDPSVTKMVRASASFQDLGE 110
Query: 77 DGYQFEIIFVSSDRSESSYQSYLSGMPWPAIPYASETRQSLASLYNVHGI 126
DG EI F + + + + + + + VHG+
Sbjct: 111 DG---EIKFEAVEGAVALADR-------ASSFMVDSEEYKITN-VKVHGM 149
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 30.5 bits (68), Expect = 0.060
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEI 83
E +V+ + F W P C L K+K + +
Sbjct: 20 EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV 60
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 30.0 bits (67), Expect = 0.077
Identities = 5/56 (8%), Positives = 7/56 (12%), Gaps = 2/56 (3%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAI 107
F K + + I V L
Sbjct: 26 FDIASPYGEKH--EAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 79
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 29.9 bits (66), Expect = 0.084
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 46 QVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWP 105
+ L+F WCP C A P ++ + +++ + QS++S
Sbjct: 25 KPAVLWFWTPWCPFCNAEAPS----LSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLN 80
Query: 106 AIPYASETRQSLASLYNVHGIPSLILL 132
++ + + YNV P+ +
Sbjct: 81 -FTNLNDADGVIWARYNVPWQPAFVFY 106
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5
{Haemophilus influenzae [TaxId: 727]}
Length = 74
Score = 28.7 bits (64), Expect = 0.089
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAI 107
F+ CP C + L + G FE I + D + S ++ P +
Sbjct: 10 FTKPGCPFCAK-------AKQLLHDKGLSFEEIILGHDATIVSVRAVSGRTTVPQV 58
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 29.4 bits (66), Expect = 0.13
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 16/66 (24%)
Query: 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAF--TPQLIETYRKLKE 76
K Y A G V +V+ + S V F ++ + Y+ LK+
Sbjct: 88 KVLSPKYLGSWATGKVKGRVIEILFSWTV--------------WFPEDIKIRDAYQMLKK 133
Query: 77 DGYQFE 82
G +
Sbjct: 134 QGIIKQ 139
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 28.9 bits (64), Expect = 0.14
Identities = 9/54 (16%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Query: 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMP 103
F+ CP C L D + + + ++ + + Y+ Y +P
Sbjct: 20 TLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPENSTWYERYKFDIP 68
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 29.2 bits (64), Expect = 0.16
Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 33 TVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSE 92
VL+ + + L A WCP +A L + ++ ++
Sbjct: 11 FYQADVLT---QGKPVLLNVWATWCPTSRAEHQYLNQLSA------QGIRVVGMNYKDDR 61
Query: 93 SSYQSYLSGMPWPAIPYASETRQSLASLYNVHGIPSLILL 132
S+L + P + L V+G P L+
Sbjct: 62 QKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLI 101
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like
protein {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 85
Score = 28.4 bits (62), Expect = 0.19
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 50 LYFSAHWCPPCKAF 63
F++ CP C A
Sbjct: 7 ELFTSPMCPHCPAA 20
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 27.7 bits (61), Expect = 0.26
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAIP 108
F CP C + + D +Q++ + + ++ +G P +P
Sbjct: 6 FGRSGCPYCVRAKDLAEK--LSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP 60
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 28.0 bits (61), Expect = 0.38
Identities = 5/22 (22%), Positives = 6/22 (27%)
Query: 50 LYFSAHWCPPCKAFTPQLIETY 71
L F CP C +
Sbjct: 20 LVFVTPTCPYCPLAVRMAHKFA 41
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 27.9 bits (61), Expect = 0.39
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 40 SYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYL 99
+ + + + + F A WC CKA P+ + KLK +G + + V + Q Y
Sbjct: 19 EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQY- 77
Query: 100 SGMPWPAIPY 109
+P I +
Sbjct: 78 GVRGYPTIKF 87
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 151
Score = 28.3 bits (63), Expect = 0.41
Identities = 12/66 (18%), Positives = 17/66 (25%), Gaps = 16/66 (24%)
Query: 19 KGAKKTYNIGLAEGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAF--TPQLIETYRKLKE 76
K Y V TKV+ + S A ++ + Y LK
Sbjct: 89 KVVSPKYLGDRVSEKVKTKVIELLYSWT--------------MALPEEAKIKDAYHMLKR 134
Query: 77 DGYQFE 82
G
Sbjct: 135 QGIVQS 140
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 27.4 bits (60), Expect = 0.46
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRK 73
+++ I + F A WC PCK P L E +
Sbjct: 17 LKADGAILVDFWAEWCGPCKMIAPILDEIADE 48
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 26.5 bits (58), Expect = 0.71
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 7/56 (12%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAI 107
++ C C A T + L G + + +S D Y L + P +
Sbjct: 6 YTKPACVQCTA-------TKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVV 54
>d1qfxa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus niger [TaxId: 5061]}
Length = 447
Score = 27.8 bits (61), Expect = 0.83
Identities = 4/37 (10%), Positives = 7/37 (18%)
Query: 66 QLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGM 102
Y L R + + + G
Sbjct: 119 DYKARYGHLWNGETVVPFFSSGYGRVIETARKFGEGF 155
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 26.8 bits (58), Expect = 0.90
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIF 85
+ES + + F A WC PCK P + E ++ +++
Sbjct: 14 LESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNT 57
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 145
Score = 27.1 bits (60), Expect = 0.92
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 65 PQLIETYRKLKEDGYQF 81
+ +T LK G+ F
Sbjct: 124 QAIKDTMTILKAKGHTF 140
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 27.3 bits (60), Expect = 0.97
Identities = 4/54 (7%), Positives = 13/54 (24%), Gaps = 4/54 (7%)
Query: 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMP 103
+ C A L + + + + + + + +P
Sbjct: 125 VNIYEDGVRGCDALNSSLECLA----AEYPMVKFCKIRASNTGAGDRFSSDVLP 174
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 140
Score = 26.7 bits (58), Expect = 1.1
Identities = 8/45 (17%), Positives = 14/45 (31%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFV 86
+ + + + + A WC CK P E I +
Sbjct: 27 NDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKL 71
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 26.5 bits (58), Expect = 1.2
Identities = 3/27 (11%), Positives = 5/27 (18%)
Query: 51 YFSAHWCPPCKAFTPQLIETYRKLKED 77
Y K + L +
Sbjct: 32 YPYGEKQDEFKRLAENSASSDDLLVAE 58
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga
maritima [TaxId: 2336]}
Length = 285
Score = 26.9 bits (59), Expect = 1.3
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 64 TPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQS 97
+ Y K KE+ Y ++ S + +Y S
Sbjct: 69 VEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNS 102
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Escherichia coli [TaxId: 562]}
Length = 188
Score = 26.5 bits (57), Expect = 1.6
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFV 86
F + +CP C F L + K+ ++
Sbjct: 25 FFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKY 59
>d1vqo31 g.41.8.3 (3:1-92) Ribosomal protein L44e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 92
Score = 25.8 bits (57), Expect = 1.6
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 57 CPPCKAFTPQLIETYRKLKEDGY 79
CP C +E R ++ G
Sbjct: 11 CPHCNEHQEHEVEKVRSGRQTGM 33
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 25.9 bits (56), Expect = 1.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 42 IESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKE 76
+++ Q + +YF A WC PC+ +P + +
Sbjct: 17 LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD 51
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 26.5 bits (57), Expect = 1.8
Identities = 10/55 (18%), Positives = 18/55 (32%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPA 106
F CP C+ + + E + + G II + ES + +
Sbjct: 31 FINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDY 85
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia
coli [TaxId: 562]}
Length = 76
Score = 25.0 bits (54), Expect = 2.1
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Query: 52 FSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSYLSGMPWPAI 107
++ + C C A T R ++ G+ FE+I V + P +
Sbjct: 6 YTRNDCVQCHA-------TKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVV 54
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 25.9 bits (56), Expect = 2.3
Identities = 5/50 (10%), Positives = 10/50 (20%)
Query: 43 ESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSE 92
+ + + C+ + F V D E
Sbjct: 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE 89
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase
subunit F (AhpF), N-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 96
Score = 25.5 bits (55), Expect = 2.3
Identities = 5/49 (10%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 50 LYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98
+ + C C L + + I + ++E + ++
Sbjct: 20 ETYYSLSCHNCPDVVQALNL--MAVLNPRIKHTAIDGGTFQNEITERNV 66
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 153
Score = 26.0 bits (57), Expect = 2.4
Identities = 4/17 (23%), Positives = 8/17 (47%)
Query: 65 PQLIETYRKLKEDGYQF 81
++ Y L+ G +F
Sbjct: 135 TGVVTIYEDLRRKGLEF 151
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 25.6 bits (55), Expect = 2.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 37 KVLSYIESCQVIGLYFSAHWCPPC 60
++ ES ++ + F+A WC PC
Sbjct: 20 QLQKANESKTLVVVDFTASWCGPC 43
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 25.6 bits (55), Expect = 2.6
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 37 KVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLK 75
++ E + I + F+A WC PCK P
Sbjct: 16 QLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA 54
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 25.2 bits (54), Expect = 3.4
Identities = 17/103 (16%), Positives = 28/103 (27%), Gaps = 28/103 (27%)
Query: 46 QVIGLYFSAH-------WCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDRSESSYQSY 98
+ I YF+ WCP C P + E + + E I+
Sbjct: 22 KTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEK------- 71
Query: 99 LSGMPWPAIPYASETRQSLASLYNVHGIPSLILLAVEAGGRLD 141
PY + V +P+L+ +L
Sbjct: 72 ---------PYWKDPNNDFRKNLKVTAVPTLLK--YGTPQKLV 103
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 25.5 bits (55), Expect = 3.9
Identities = 11/95 (11%), Positives = 25/95 (26%), Gaps = 2/95 (2%)
Query: 31 EGTVTTKVLSYIESCQVIGLYFSAHWCPPCKAFTPQLIETYRKLKEDGYQFEIIFVSSDR 90
G + + + A + P C Y + G + V S
Sbjct: 16 HGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 75
Query: 91 SESSYQS--YLSGMPWPAIPYASETRQSLASLYNV 123
S ++ P ++ + ++A +
Sbjct: 76 SHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGL 110
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 24.4 bits (52), Expect = 6.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 50 LYFSAHWCPPCKAFTPQ 66
L WC PCKA P+
Sbjct: 30 LDMFTQWCGPCKAMAPK 46
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 122
Score = 24.1 bits (52), Expect = 7.6
Identities = 7/32 (21%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 65 PQLIETYRKLKEDGYQFEIIFVSSDRSESSYQ 96
P +ET + L+++ ++ I++ S R
Sbjct: 24 PFAVETLKLLQQEKHRL-ILW--SVREGELLD 52
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.136 0.417
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 712,837
Number of extensions: 31315
Number of successful extensions: 146
Number of sequences better than 10.0: 1
Number of HSP's gapped: 143
Number of HSP's successfully gapped: 53
Length of query: 190
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 110
Effective length of database: 1,309,196
Effective search space: 144011560
Effective search space used: 144011560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.6 bits)