BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8730
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A9ULE9|DJC22_XENTR DnaJ homolog subfamily C member 22 OS=Xenopus tropicalis GN=dnajc22
PE=2 SV=1
Length = 340
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
KSL Y LW +GG G++H YLGRD LW TLGG FG GW+ D + I +V N+
Sbjct: 3 KSLLAAYGLWALGGPLGLYHIYLGRDSHALLWMLTLGG-FGMGWMWDFWKIPIHVYKYNR 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
++ N ++ + PP S IRF G + V ++ + + +L
Sbjct: 62 Q----ERKNIEVKEGE-PPASPIRFIGQVATGIYFGIVAAIGL------SFLSSFHMVVL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYWYVDESTACTVMVLASALAFDTLSK 209
P+A ALGV V +G +T + L AA+ P+++ M+ S A T K
Sbjct: 111 PLAVALGVHLVATVGEQTSDLKNTLIAAFLTSPIFY-----GRAVSMIPISLTASITSQK 165
Query: 210 --RWQTKPKPRKRFLRRCLTIGACALLYSSLWGSYLYFNAKIT 250
R++ + + +++ R IG L ++ N +T
Sbjct: 166 HMRYRLQQEKQEKLSLRLYRIGLVYLAFTGPLAYSALLNTSLT 208
>sp|Q8CHS2|DJC22_MOUSE DnaJ homolog subfamily C member 22 OS=Mus musculus GN=Dnajc22 PE=2
SV=1
Length = 339
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
K L +TY+LW +GG G+HH YLGRD LW TL G G GWL + + + ++VA AN+
Sbjct: 3 KGLLMTYVLWALGGPVGLHHLYLGRDSHALLWMLTL-GGGGLGWLWEFWKLPSFVAQANR 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
+ + + + PP S +RF VV + V +++ D + L
Sbjct: 62 VQSWKQRPEE-----ERPPLSLLRFASQIVVGVYFGLVALVSLSSMD------NFYIVGL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYW 185
P+A LGV V +G++T L AA+ PV++
Sbjct: 111 PLAVGLGVLLVAAVGNQTSDFKNTLGAAFLTSPVFY 146
>sp|Q17QW0|DJC22_BOVIN DnaJ homolog subfamily C member 22 OS=Bos taurus GN=DNAJC22 PE=2
SV=2
Length = 347
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
K L +TY LW VGG G+HH YLGRD LW TL G G GWL + + + ++VA AN+
Sbjct: 3 KGLLMTYTLWAVGGPAGLHHLYLGRDSHALLWMLTL-GGGGLGWLWEFWMLPSFVAQANR 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
++ PP S IRF +V + V +++ + L
Sbjct: 62 AQEQRQGSGRGT-----PPLSLIRFVAQMIVGMYFGLVALISL------SFMASFYIVGL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYWYVDESTACTVMVLASALAFDTLSK 209
P+A LGV V +G++T + L AA+ P+++ A + LA+++ T K
Sbjct: 111 PLAVGLGVLLVAAVGNQTSDLKNTLGAAFLTSPIFY--GRPIAILPISLAASI---TAQK 165
Query: 210 RWQTKP 215
+ KP
Sbjct: 166 HRRYKP 171
>sp|Q5RBD7|DJC22_PONAB DnaJ homolog subfamily C member 22 OS=Pongo abelii GN=DNAJC22 PE=2
SV=1
Length = 341
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
K L +TY LW VGG G+HH YLGRD LW TL G G GWL + + + ++VA AN+
Sbjct: 3 KGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTL-GGGGLGWLWEFWKLPSFVAQANR 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
+ + R PP S IRF +V + V +++ + L
Sbjct: 62 AQGQ----RQSPRGVT-PPLSPIRFAAQVIVGIYFGLVALISLSSM------VNFYIVAL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYW 185
P+A LGV V +G++T L AA+ P+++
Sbjct: 111 PLAVGLGVLLVAAVGNQTSDFKNTLGAAFLTSPIFY 146
>sp|Q9GPR3|TM2D1_DICDI TM2 domain-containing protein DDB_G0277895 OS=Dictyostelium
discoideum GN=DDB_G0277895 PE=3 SV=1
Length = 153
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 28 AEKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADA 87
++KS+ +TYLLWL G+FG+H FYL R G L+ T G +F GW DI I V D
Sbjct: 2 SQKSVCVTYLLWLFFGLFGIHRFYLNRPCSGVLYLFTCGCFF-IGWFIDICLIPGMVEDY 60
Query: 88 NKDRDYLDK 96
N D ++K
Sbjct: 61 NAKYDSMNK 69
>sp|Q8N4W6|DJC22_HUMAN DnaJ homolog subfamily C member 22 OS=Homo sapiens GN=DNAJC22 PE=2
SV=1
Length = 341
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
K L +TY LW VGG G+HH YLGRD LW TL G G GWL + + + ++VA AN+
Sbjct: 3 KGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTL-GGGGLGWLWEFWKLPSFVAQANR 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
+ + R PP S IRF +V + V +++ + L
Sbjct: 62 AQGQ----RQSPRGVT-PPLSPIRFAAQVIVGIYFGLVALISLSSMV------NFYIVAL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYW 185
P+A LGV V +G++T L +A+ P+++
Sbjct: 111 PLAVGLGVLLVAAVGNQTSDFKNTLGSAFLTSPIFY 146
>sp|Q5PR00|DJC22_RAT DnaJ homolog subfamily C member 22 OS=Rattus norvegicus GN=Dnajc22
PE=2 SV=1
Length = 341
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 30 KSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVADANK 89
K L +TY LW GG G+HH YLGRD L W G G GWL + + + ++VA AN
Sbjct: 3 KGLLMTYALWAFGGPVGLHHLYLGRDSHALL-WMLTLGGGGLGWLWEFWKLPSFVAQANG 61
Query: 90 DRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSMAIPEEDIGGLPWKYLHFLL 149
+ + + + PP S +RF VV + V +++ + L
Sbjct: 62 VQSWKQRPEE-----ERPPLSLLRFASQMVVGVYFGLVALISLSSTA------NFYIVGL 110
Query: 150 PIACALGVWSVGNIGHETGTIWWCLAAAYACYPVYW 185
P+A LGV V +G++T L AA+ PV++
Sbjct: 111 PLAVGLGVLLVAAVGNQTSDFKNTLGAAFLTSPVFY 146
>sp|Q54KZ0|TM2D3_DICDI TM2 domain-containing protein DDB_G0287015 OS=Dictyostelium
discoideum GN=DDB_G0287015 PE=3 SV=1
Length = 137
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 29 EKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHIQNYVAD-A 87
+ SL + YLL + G FGVH FY+GR I G ++ T GG FG G++ D F + + V
Sbjct: 9 QASLVVAYLLLIFLGFFGVHRFYVGRTISGVVYLLT-GGIFGIGYIVDFFLLPSLVCHYN 67
Query: 88 NKDRDY 93
NK D+
Sbjct: 68 NKHHDH 73
>sp|Q54YM7|TM2D2_DICDI TM2 domain-containing protein DDB_G0278163 OS=Dictyostelium
discoideum GN=DDB_G0278163 PE=3 SV=1
Length = 161
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 10 TNYVTSRTYNNSDKTKVHAEKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYF 69
T VT ++ + KS+ + Y+LW GI G H YLGR FL++ T G F
Sbjct: 33 TPIVTPVPVVYGSRSSSYCPKSMTVAYVLWFFFGILGFHRLYLGRVGTFFLYFFT-AGVF 91
Query: 70 GFGWLRDIFHIQNYVADANK 89
G GWL D F+ V N+
Sbjct: 92 GLGWLFDAFYTHKMVKHYNE 111
>sp|Q94421|TM2D4_CAEEL TM2 domain-containing protein ZK858.5 OS=Caenorhabditis elegans
GN=ZK858.5 PE=3 SV=2
Length = 409
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 20 NSDKTKVHAEKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFH 79
N+++T+V +I ++ +VGG+FG H YL + + F+++ TLG GWL D F
Sbjct: 2 NNEETEVKP----WIVRIILIVGGLFGAHRLYLKQVPEAFVFFSTLGVLL-IGWLYDSFM 56
Query: 80 IQNYV---------ADANKDRDYLDKFNHNLRSYKYPPFSTIRFTGMTVVAYLWSTVVSM 130
+ V ++ NK+++ K+ FS RF + + L+ + + +
Sbjct: 57 FKYEVNEYNQLINQSENNKEKEKWKNGKMQASQSKFVDFSFTRF----LYSVLYGSYIGL 112
Query: 131 AIPEEDIGGLPWKYLHFLLPIACAL------GVWSVGNIGHETGTIWWCLAAAYACYPVY 184
A W ++ L+P C + G++ +G G ++ + + A+++ +
Sbjct: 113 ATWLACTVTFGWTDIN-LIPFICVVALGITAGIYIIGQCGGQSRELSYIWMASFSSMFIM 171
Query: 185 WYVDESTACTVMVLASALA--FDTLSKRWQTKPKPRKRFL 222
+ ++T + L + ++ S R + + K FL
Sbjct: 172 VRLAQTTVFRAIFLTAIVSTVIGNRSARLKKRRHTWKHFL 211
>sp|Q9W2H1|TM2D1_DROME TM2 domain-containing protein CG10795 OS=Drosophila melanogaster
GN=CG10795 PE=2 SV=1
Length = 178
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 32 LYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDIFHI 80
L T LL + G+FGV FYLG G L +CTLGG F G L DI I
Sbjct: 92 LDTTLLLSVFLGMFGVDRFYLGYPGIGLLKFCTLGGMF-LGQLIDIVLI 139
>sp|Q95PJ8|TM2D3_CAEEL TM2 domain-containing protein Y66D12A.21 OS=Caenorhabditis elegans
GN=Y66D12A.21 PE=3 SV=2
Length = 179
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 18 YNNSDKTKVH--AEKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLR 75
+N + + H A S T LL + G FG+ YLG G + +LGG F F WL
Sbjct: 74 FNRTVPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLGYYALGLIKMFSLGGLFVF-WLV 132
Query: 76 DIFHI 80
DI I
Sbjct: 133 DIILI 137
>sp|A5PLH4|TM2D1_DANRE TM2 domain-containing protein 1 OS=Danio rerio GN=tm2d1 PE=2 SV=1
Length = 197
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 18 YNNSDKTKVHAEKSLYITYLLWLVGGIFGVHHFYLGRDIQGFLWWCTLGGYFGFGWLRDI 77
+N + + + S + L L G G FYLG G L +CT+ G+ G G L D
Sbjct: 97 FNKTIPCRNVSGYSYKVAVALSLFLGWIGADRFYLGYPALGLLKFCTV-GFCGIGSLVDF 155
Query: 78 FHIQNYVADANKDRDYL 94
I + + DY+
Sbjct: 156 MLISMQIVGPSDGSDYI 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.480
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,936,587
Number of Sequences: 539616
Number of extensions: 5057757
Number of successful extensions: 12725
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12692
Number of HSP's gapped (non-prelim): 16
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)