RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8730
         (287 letters)



>d1nekb1 a.1.2.1 (B:107-238) Succinate dehydogenase {Escherichia
           coli [TaxId: 562]}
          Length = 132

 Score = 28.7 bits (63), Expect = 0.39
 Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 2/69 (2%)

Query: 165 HETGTIWWCLAAAYACYPVYWYVDESTACTVMVLASALAFDTLSKRWQTKPKPRKR--FL 222
                   C   + +C   +W  D+      ++ A     D+      ++         +
Sbjct: 38  DGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSV 97

Query: 223 RRCLTIGAC 231
            RC +I  C
Sbjct: 98  FRCHSIMNC 106


>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione
           reductase) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 230

 Score = 25.6 bits (55), Expect = 8.0
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 66  GGYFGFGWLRDIFHIQNYVADANKDRDYLDKFNHNLRSYKYPPFSTI-RFTGMTVVAYLW 124
            G++  G L+    + +       +       N + R + +P       F G  V+A   
Sbjct: 129 PGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQI 188

Query: 125 STVVSMAIPEE 135
           S    +A  EE
Sbjct: 189 SFAPEIASEEE 199


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.140    0.480 

Gapped
Lambda     K      H
   0.267   0.0477    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,215,736
Number of extensions: 58030
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's gapped: 151
Number of HSP's successfully gapped: 12
Length of query: 287
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 203
Effective length of database: 1,254,276
Effective search space: 254618028
Effective search space used: 254618028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.4 bits)